Psyllid ID: psy2769

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------
Protein Sequence
MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLLERK
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHHcccccccEEEEEEEccccEEEEEEcccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccccEEEEEEcccccccccccccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccccccccccc
Secondary Structure Prediction (SSPRO)
EEEEEcccccccHHHHHHHHHHHccccccccEEEEEEEccEEEEEEEccccEHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccEEcccccHHHEEEccHHHcccEEEccccccHHHcccccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccHHHHcccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccEEEEEEHHHHccc
Coil and Loop (DISEMBL)
mkvepvrnpvqrLFWERNFYeklhgapgvphvmgygtsgdYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHrkkivhrdikpdnflmgvrenfntVYLVDFGlavdfcpncpprirtrgltgtARYASvnahqwldqsprdDLEALCYTLVYFLRgklpwqsiksdnEETRMQRVTEMKltmtpeaicegtppEFAEFLRYCRGlafseepnygklRDSFRNLLENKERCEFDLRYDWTLLERK
Flexible Loop (DISEMBL)
mkvepvrnpvqrLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEhvhrkkivhrdikpdnflmgVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNahqwldqsprDDLEALCYTLVYFLRgklpwqsiksdneeTRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRnllenkercefdlrydwtllerk
Low Complexity Region (SEG)
MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLLERK
Disordered region (IsUnstruct)
*********VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI******************MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLL***
Disordered Region (DISOPRED)
MKVE***NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLLER*
Disordered Region (DISEMBL)
MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLLERK
Disordered Region (DISPRO)
MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLLERK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLLERK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	257	2.2.26 [Sep-21-2011]
P67963	337	Casein kinase I isoform a	N/A	N/A	0.988	0.753	0.494	7e-73
Q8BK63	337	Casein kinase I isoform a	yes	N/A	0.988	0.753	0.494	7e-73
P48729	337	Casein kinase I isoform a	yes	N/A	0.988	0.753	0.494	7e-73
P67962	337	Casein kinase I isoform a	yes	N/A	0.988	0.753	0.494	7e-73
P97633	325	Casein kinase I isoform a	yes	N/A	0.988	0.781	0.494	8e-73
P67829	325	Casein kinase I isoform a	N/A	N/A	0.988	0.781	0.494	1e-72
P67828	325	Casein kinase I isoform a	yes	N/A	0.988	0.781	0.494	1e-72
P67827	325	Casein kinase I isoform a	yes	N/A	0.988	0.781	0.494	1e-72
P42158	450	Casein kinase I isoform d	no	N/A	0.988	0.564	0.490	1e-71
P42168	341	Casein kinase I isoform a	yes	N/A	0.984	0.741	0.492	5e-71

>sp|P67963|KC1A_XENLA Casein kinase I isoform alpha OS=Xenopus laevis GN=csnk1a1 PE=2 SV=1

 Score =  273 bits (699), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 181/261 (69%), Gaps = 7/261 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
                  ++D  +DWT+L++K
Sbjct: 285 FRTLNH-QYDYTFDWTMLKQK 304

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. May play a role in segregating chromosomes during mitosis.
Xenopus laevis (taxid: 8355)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8BK63|KC1A_MOUSE Casein kinase I isoform alpha OS=Mus musculus GN=Csnk1a1 PE=2 SV=2

 Score =  273 bits (699), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 181/261 (69%), Gaps = 7/261 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
                  ++D  +DWT+L++K
Sbjct: 285 FRTLNH-QYDYTFDWTMLKQK 304

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P48729|KC1A_HUMAN Casein kinase I isoform alpha OS=Homo sapiens GN=CSNK1A1 PE=1 SV=2

 Score =  273 bits (699), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 181/261 (69%), Gaps = 7/261 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
                  ++D  +DWT+L++K
Sbjct: 285 FRTLNH-QYDYTFDWTMLKQK 304

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P67962|KC1A_CHICK Casein kinase I isoform alpha OS=Gallus gallus GN=CSNK1A1 PE=2 SV=1

 Score =  273 bits (699), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 181/261 (69%), Gaps = 7/261 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
                  ++D  +DWT+L++K
Sbjct: 285 FRTLNH-QYDYTFDWTMLKQK 304

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. May play a role in segregating chromosomes during mitosis.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P97633|KC1A_RAT Casein kinase I isoform alpha OS=Rattus norvegicus GN=Csnk1a1 PE=2 SV=1

 Score =  273 bits (698), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 181/261 (69%), Gaps = 7/261 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQGKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
                  ++D  +DWT+L++K
Sbjct: 285 FRTLNH-QYDYTFDWTMLKQK 304

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P67829|KC1A_SHEEP Casein kinase I isoform alpha OS=Ovis aries GN=CSNK1A1 PE=3 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 181/261 (69%), Gaps = 7/261 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
                  ++D  +DWT+L++K
Sbjct: 285 FRTLNH-QYDYTFDWTMLKQK 304

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.

Ovis aries (taxid: 9940)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P67828|KC1A_RABIT Casein kinase I isoform alpha OS=Oryctolagus cuniculus GN=CSNK1A1 PE=2 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 181/261 (69%), Gaps = 7/261 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
                  ++D  +DWT+L++K
Sbjct: 285 FRTLNH-QYDYTFDWTMLKQK 304

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P67827|KC1A_BOVIN Casein kinase I isoform alpha OS=Bos taurus GN=CSNK1A1 PE=1 SV=1

 Score =  273 bits (698), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 129/261 (49%), Positives = 181/261 (69%), Gaps = 7/261 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
                  ++D  +DWT+L++K
Sbjct: 285 FRTLNH-QYDYTFDWTMLKQK 304

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P42158|KC1D_ARATH Casein kinase I isoform delta-like OS=Arabidopsis thaliana GN=At4g26100 PE=2 SV=2

 Score =  270 bits (689), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 127/259 (49%), Positives = 179/259 (69%), Gaps = 5/259 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y  L G  GVP+V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKLYRILQGGTGVPNVKWFGVEGDYNVLVMDLLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++ SLK+VLMLADQMI+R+E  H K  +HRD+KPDNFLMG+    N VY++DFGLA  +
Sbjct: 97  SRKLSLKSVLMLADQMINRVEFFHSKSFLHRDLKPDNFLMGLGRRANQVYIIDFGLAKKY 156

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             +      P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YFL+G LPWQ +
Sbjct: 157 RDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYILMYFLKGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + +R++E K++ + EA+C G P EFA +  YCR L F ++P+Y  L+  FR+L
Sbjct: 217 KAGTKKQKYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRIFRDL 276

Query: 237 LENKERCEFDLRYDWTLLE 255
              +E  +FD  +DWT+L+
Sbjct: 277 FI-REGFQFDYVFDWTILK 294

Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P42168|KC1A_CAEEL Casein kinase I isoform alpha OS=Caenorhabditis elegans GN=kin-19 PE=3 SV=1

 Score =  267 bits (683), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 130/264 (49%), Positives = 181/264 (68%), Gaps = 11/264 (4%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E  R    +L +E   Y  L G  G+PH+  YGT  +YN+LVM+LLGPSLEDLF +C
Sbjct: 44  IKLESNRARHPQLLYESKVYRILQGGVGIPHIRWYGTEREYNVLVMDLLGPSLEDLFNFC 103

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMI R+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 104 SRRFTMKTVLMLADQMIGRIEYVHVKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 163

Query: 121 CPNCPPRIRT-------RGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
             +   R RT       + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF RG LPW
Sbjct: 164 RDS---RTRTHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRGTLPW 220

Query: 174 QSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF 233
           Q +K+  ++ + ++++E K+T + E +C+G P EF  +L Y RGL F E P+Y  LR  F
Sbjct: 221 QGLKAATKKQKYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESPDYMYLRQLF 280

Query: 234 RNLLENKERCEFDLRYDWTLLERK 257
           R L       ++D  +DWT+L++K
Sbjct: 281 RILFRTLNH-QYDYTFDWTMLKQK 303

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
405964296	323	Casein kinase I isoform alpha [Crassostr	0.984	0.783	0.5	8e-72
356530395	456	PREDICTED: casein kinase I isoform delta	0.988	0.557	0.505	2e-71
121501708	473	casein kinase [Beta vulgaris]	0.988	0.536	0.498	2e-71
359482807	471	PREDICTED: casein kinase I isoform delta	0.988	0.539	0.498	2e-71
148677821	335	casein kinase 1, alpha 1, isoform CRA_f	0.980	0.752	0.498	2e-71
15218569	465	casein kinase 1-like protein 2 [Arabidop	0.988	0.546	0.5	2e-71
297839133	465	hypothetical protein ARALYDRAFT_476408 [	0.988	0.546	0.5	3e-71
218197369	473	hypothetical protein OsI_21224 [Oryza sa	0.988	0.536	0.498	3e-71
224128674	470	predicted protein [Populus trichocarpa]	0.988	0.540	0.498	3e-71
115465807	473	Os05g0593800 [Oryza sativa Japonica Grou	0.988	0.536	0.498	4e-71

>gi|405964296|gb|EKC29796.1| Casein kinase I isoform alpha [Crassostrea gigas]

 Score =  276 bits (705), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 132/264 (50%), Positives = 183/264 (69%), Gaps = 11/264 (4%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E  +    +L +E   Y+ L G  G+PH+  YG   DYNILVM+LLGPSLEDLF +C
Sbjct: 47  VKLESTKARHPQLLYESKLYKILQGGVGIPHIRWYGQEKDYNILVMDLLGPSLEDLFNFC 106

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMI R+E+VH K  +HRDIKPDNFLMG+  + N V+L+DFGLA  +
Sbjct: 107 SRRFTMKTVLMLADQMIGRIEYVHNKNFIHRDIKPDNFLMGIGRHCNKVFLIDFGLAKKY 166

Query: 121 CPNCPPRIRT-------RGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
             +   R RT       + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF RG LPW
Sbjct: 167 RDS---RTRTHIAYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRGSLPW 223

Query: 174 QSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF 233
           Q +K++ ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  F
Sbjct: 224 QGLKANTKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLF 283

Query: 234 RNLLENKERCEFDLRYDWTLLERK 257
           R L       ++D  +DWT+L++K
Sbjct: 284 RILFRTLN-YQYDYTFDWTMLKQK 306

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|356530395|ref|XP_003533767.1| PREDICTED: casein kinase I isoform delta-like [Glycine max]

 Score =  275 bits (703), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 131/259 (50%), Positives = 178/259 (68%), Gaps = 5/259 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y  L G  G+P V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKLYRVLQGGTGIPDVRWFGVEGDYNVLVMDLLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++ SLKTVLMLADQMI+R+E VH K  +HRDIKPDNFLMG+R   N VY +DFGLA  +
Sbjct: 97  SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLRRRANQVYCIDFGLAKKY 156

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             +      P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YFLRG LPWQ +
Sbjct: 157 RDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + +R++E K++ + EA+C G P EFA +  YCR L F + P+Y  L+  FR+L
Sbjct: 217 KAGTKKQKYERISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDL 276

Query: 237 LENKERCEFDLRYDWTLLE 255
              +E  +FD  +DWT+L+
Sbjct: 277 FI-REGFQFDYVFDWTILK 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|121501708|gb|ABM55249.1| casein kinase [Beta vulgaris]

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 129/259 (49%), Positives = 180/259 (69%), Gaps = 5/259 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y  L G  G+P+V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++FSLKTVLMLADQMI+R+E VH K  +HRDIKPDNFLMG+    N VY++DFGLA  +
Sbjct: 97  SRKFSLKTVLMLADQMINRIEFVHSKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKY 156

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YFLRG LPWQ +
Sbjct: 157 RDTTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++ + EA+C G P EFA +  YCR L F ++P+Y  L+  +R+L
Sbjct: 217 KAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIYRDL 276

Query: 237 LENKERCEFDLRYDWTLLE 255
              +E  +FD  +DWT+L+
Sbjct: 277 FI-REGFQFDYVFDWTILK 294

Source: Beta vulgaris

Species: Beta vulgaris

Genus: Beta

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482807|ref|XP_002277513.2| PREDICTED: casein kinase I isoform delta-like [Vitis vinifera] gi|297743045|emb|CBI35912.3| unnamed protein product [Vitis vinifera]

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 129/259 (49%), Positives = 181/259 (69%), Gaps = 5/259 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y+ L G  G+P+V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKLYKILQGGTGIPNVKWFGVEGDYNVLVMDLLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++ SLKTVLMLADQMI+R+E VH K  +HRDIKPDNFLMG+    N VY++DFGLA  +
Sbjct: 97  SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKY 156

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             +      P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YFLRG LPWQ +
Sbjct: 157 RDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++ + EA+C G P EFA +  YCR L F ++P+Y  L+  FR+L
Sbjct: 217 KAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDL 276

Query: 237 LENKERCEFDLRYDWTLLE 255
              +E  +FD  +DWT+L+
Sbjct: 277 FI-REGFQFDYVFDWTILK 294

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148677821|gb|EDL09768.1| casein kinase 1, alpha 1, isoform CRA_f [Mus musculus]

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 130/261 (49%), Positives = 182/261 (69%), Gaps = 9/261 (3%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct: 47  LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct: 105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
             N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct: 165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct: 225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query: 237 LENKERCEFDLRYDWTLLERK 257
             N    ++D  +DWT+L++K
Sbjct: 285 TLNH---QYDYTFDWTMLKQK 302

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|15218569|ref|NP_177415.1| casein kinase 1-like protein 2 [Arabidopsis thaliana] gi|12323761|gb|AAG51841.1|AC010926_4 putative casein kinase I; 37964-34339 [Arabidopsis thaliana] gi|16648961|gb|AAL24332.1| putative casein kinase I [Arabidopsis thaliana] gi|33942053|gb|AAQ55279.1| At1g72710 [Arabidopsis thaliana] gi|62996978|gb|AAY24533.1| casein kinase 1-like protein 2 [Arabidopsis thaliana] gi|332197242|gb|AEE35363.1| casein kinase 1-like protein 2 [Arabidopsis thaliana]

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 129/258 (50%), Positives = 183/258 (70%), Gaps = 4/258 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y+ L G  GVP+V  YG  GDYN+LV++LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKLYKVLQGGTGVPNVKWYGVEGDYNVLVIDLLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++ SLKTVLMLADQMI+R+E VH+K  +HRDIKPDNFLMG+    N VY++DFGLA  +
Sbjct: 97  SRKLSLKTVLMLADQMINRIEFVHQKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKY 156

Query: 121 CPNCPPRI---RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIK 177
             +    I     + LTGTARYAS+N H  ++QS RDDLE+L + L+YFL+G LPWQ +K
Sbjct: 157 RDSNHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLKGSLPWQGLK 216

Query: 178 SDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL 237
           + N++ + ++++E K++ + EA+C G P EFA +  YCR L F ++P+Y  L+  FR+L 
Sbjct: 217 AGNKKQKYEKISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276

Query: 238 ENKERCEFDLRYDWTLLE 255
             +E  +FD  +DWT+L+
Sbjct: 277 I-REGFQFDYVFDWTILK 293

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839133|ref|XP_002887448.1| hypothetical protein ARALYDRAFT_476408 [Arabidopsis lyrata subsp. lyrata] gi|297333289|gb|EFH63707.1| hypothetical protein ARALYDRAFT_476408 [Arabidopsis lyrata subsp. lyrata]

 Score =  274 bits (701), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 129/258 (50%), Positives = 183/258 (70%), Gaps = 4/258 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y+ L G  GVP+V  YG  GDYN+LV++LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKLYKVLQGGTGVPNVKWYGVEGDYNVLVIDLLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++ SLKTVLMLADQMI+R+E VH+K  +HRDIKPDNFLMG+    N VY++DFGLA  +
Sbjct: 97  SRKLSLKTVLMLADQMINRIEFVHQKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKY 156

Query: 121 CPNCPPRI---RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIK 177
             +    I     + LTGTARYAS+N H  ++QS RDDLE+L + L+YFL+G LPWQ +K
Sbjct: 157 RDSNHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLKGSLPWQGLK 216

Query: 178 SDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL 237
           + N++ + ++++E K++ + EA+C G P EFA +  YCR L F ++P+Y  L+  FR+L 
Sbjct: 217 AGNKKQKYEKISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276

Query: 238 ENKERCEFDLRYDWTLLE 255
             +E  +FD  +DWT+L+
Sbjct: 277 I-REGFQFDYVFDWTILK 293

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218197369|gb|EEC79796.1| hypothetical protein OsI_21224 [Oryza sativa Indica Group]

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 129/259 (49%), Positives = 179/259 (69%), Gaps = 5/259 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y  L G  G+P+V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKLYRILQGGTGIPNVKWFGVEGDYNVLVMDLLGPSLEDLFSFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           +++ SLKTVLMLADQMI+R+E VH K  +HRDIKPDNFLMG+ +  N VY++DFGLA  +
Sbjct: 97  NRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGKRANQVYVIDFGLAKKY 156

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYASVN H  ++QS RDD+E+L Y L+YFLRG LPWQ +
Sbjct: 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDMESLGYVLMYFLRGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+ N++ + ++++E K+  + EA+C G P EFA +  YCR L F + P+Y  L+  FR+L
Sbjct: 217 KAGNKKQKYEKISERKIATSTEALCRGYPTEFASYFHYCRSLRFEDSPDYQYLKRLFRDL 276

Query: 237 LENKERCEFDLRYDWTLLE 255
              +E  +FD  +DWT+L+
Sbjct: 277 FI-REGFQFDYVFDWTILK 294

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128674|ref|XP_002329062.1| predicted protein [Populus trichocarpa] gi|222839733|gb|EEE78056.1| predicted protein [Populus trichocarpa]

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 129/259 (49%), Positives = 179/259 (69%), Gaps = 5/259 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y+ L G  G+P+V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTRHPQLLYESKLYKMLQGGTGIPNVKWFGVEGDYNVLVMDLLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++ SLKTVLMLADQMI+R+E VH K  +HRDIKPDNFLMG+    N VY +DFGLA  +
Sbjct: 97  SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKY 156

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YFLRG LPWQ +
Sbjct: 157 RDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K++ + EA+C G P EFA +  YCR L F ++P+Y  L+  FR+L
Sbjct: 217 KAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRLFRDL 276

Query: 237 LENKERCEFDLRYDWTLLE 255
              +E  +FD  +DWT+L+
Sbjct: 277 FI-REGFQFDYVFDWTILK 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115465807|ref|NP_001056503.1| Os05g0593800 [Oryza sativa Japonica Group] gi|48475238|gb|AAT44307.1| putative protein kinase ADK1 [Oryza sativa Japonica Group] gi|113580054|dbj|BAF18417.1| Os05g0593800 [Oryza sativa Japonica Group] gi|215767275|dbj|BAG99503.1| unnamed protein product [Oryza sativa Japonica Group] gi|222632774|gb|EEE64906.1| hypothetical protein OsJ_19766 [Oryza sativa Japonica Group]

 Score =  273 bits (699), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 129/259 (49%), Positives = 179/259 (69%), Gaps = 5/259 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y  L G  G+P+V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKLYRILQGGTGIPNVKWFGVEGDYNVLVMDLLGPSLEDLFSFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           +++ SLKTVLMLADQMI+R+E VH K  +HRDIKPDNFLMG+ +  N VY++DFGLA  +
Sbjct: 97  NRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGKRANQVYVIDFGLAKKY 156

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYASVN H  ++QS RDD+E+L Y L+YFLRG LPWQ +
Sbjct: 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDMESLGYVLMYFLRGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+ N++ + ++++E K+  + EA+C G P EFA +  YCR L F + P+Y  L+  FR+L
Sbjct: 217 KAGNKKQKYEKISERKIATSTEALCRGYPTEFASYFHYCRSLRFEDSPDYQYLKRLFRDL 276

Query: 237 LENKERCEFDLRYDWTLLE 255
              +E  +FD  +DWT+L+
Sbjct: 277 FI-REGFQFDYVFDWTILK 294

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	257
TAIR|locus:2030170	465	CKL2 "casein kinase 1-like pro	0.988	0.546	0.5	2.7e-68
UNIPROTKB|E1BRG7	325	CSNK1A1 "Casein kinase I isofo	0.988	0.781	0.494	4.4e-68
UNIPROTKB|F1NNY0	332	CSNK1A1 "Casein kinase I isofo	0.988	0.765	0.494	4.4e-68
UNIPROTKB|F1NNY1	336	CSNK1A1 "Casein kinase I isofo	0.988	0.755	0.494	4.4e-68
UNIPROTKB|P67962	337	CSNK1A1 "Casein kinase I isofo	0.988	0.753	0.494	4.4e-68
UNIPROTKB|P67827	325	CSNK1A1 "Casein kinase I isofo	0.988	0.781	0.494	4.4e-68
UNIPROTKB|Q32LI4	334	CSNK1A1 "Casein kinase I isofo	0.988	0.760	0.494	4.4e-68
UNIPROTKB|F1PUU1	337	CSNK1A1 "Uncharacterized prote	0.988	0.753	0.494	4.4e-68
UNIPROTKB|P48729	337	CSNK1A1 "Casein kinase I isofo	0.988	0.753	0.494	4.4e-68
UNIPROTKB|Q71TU5	325	CSNK1A1 "cDNA FLJ56335, highly	0.988	0.781	0.494	4.4e-68

TAIR|locus:2030170 CKL2 "casein kinase 1-like protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
 Identities = 129/258 (50%), Positives = 183/258 (70%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             +K+E V+    +L +E   Y+ L G  GVP+V  YG  GDYN+LV++LLGPSLEDLF +C
Sbjct:    37 IKLENVKTKHPQLLYESKLYKVLQGGTGVPNVKWYGVEGDYNVLVIDLLGPSLEDLFNFC 96

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S++ SLKTVLMLADQMI+R+E VH+K  +HRDIKPDNFLMG+    N VY++DFGLA  +
Sbjct:    97 SRKLSLKTVLMLADQMINRIEFVHQKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKY 156

Query:   121 CPNCPPRI---RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIK 177
               +    I     + LTGTARYAS+N H  ++QS RDDLE+L + L+YFL+G LPWQ +K
Sbjct:   157 RDSNHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLKGSLPWQGLK 216

Query:   178 SDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL 237
             + N++ + ++++E K++ + EA+C G P EFA +  YCR L F ++P+Y  L+  FR+L 
Sbjct:   217 AGNKKQKYEKISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLF 276

Query:   238 ENKERCEFDLRYDWTLLE 255
               +E  +FD  +DWT+L+
Sbjct:   277 I-REGFQFDYVFDWTILK 293

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

UNIPROTKB|E1BRG7 CSNK1A1 "Casein kinase I isoform alpha" [Gallus gallus (taxid:9031)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    47 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   285 FRTLNH-QYDYTFDWTMLKQK 304

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NNY0 CSNK1A1 "Casein kinase I isoform alpha" [Gallus gallus (taxid:9031)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    54 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 111

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   112 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 171

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   172 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 231

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   232 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 291

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   292 FRTLNH-QYDYTFDWTMLKQK 311

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NNY1 CSNK1A1 "Casein kinase I isoform alpha" [Gallus gallus (taxid:9031)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    47 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   285 FRTLNH-QYDYTFDWTMLKQK 304

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P67962 CSNK1A1 "Casein kinase I isoform alpha" [Gallus gallus (taxid:9031)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    47 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   285 FRTLNH-QYDYTFDWTMLKQK 304

GO:0005524 "ATP binding" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0000777 "condensed chromosome kinetochore" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0016607 "nuclear speck" evidence=ISS

GO:0005847 "mRNA cleavage and polyadenylation specificity factor complex" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

UNIPROTKB|P67827 CSNK1A1 "Casein kinase I isoform alpha" [Bos taurus (taxid:9913)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    47 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   285 FRTLNH-QYDYTFDWTMLKQK 304

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005847 "mRNA cleavage and polyadenylation specificity factor complex" evidence=ISS

GO:0016607 "nuclear speck" evidence=ISS

GO:0005815 "microtubule organizing center" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0000777 "condensed chromosome kinetochore" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q32LI4 CSNK1A1 "Casein kinase I isoform alpha" [Bos taurus (taxid:9913)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    47 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   285 FRTLNH-QYDYTFDWTMLKQK 304

GO:0030529 "ribonucleoprotein complex" evidence=IEA

GO:0000902 "cell morphogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1PUU1 CSNK1A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    47 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   285 FRTLNH-QYDYTFDWTMLKQK 304

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|P48729 CSNK1A1 "Casein kinase I isoform alpha" [Homo sapiens (taxid:9606)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    47 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   285 FRTLNH-QYDYTFDWTMLKQK 304

GO:0005524 "ATP binding" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0000777 "condensed chromosome kinetochore" evidence=IEA

GO:0004672 "protein kinase activity" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0016607 "nuclear speck" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005847 "mRNA cleavage and polyadenylation specificity factor complex" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:0007165 "signal transduction" evidence=NAS

GO:0007166 "cell surface receptor signaling pathway" evidence=TAS

GO:0005829 "cytosol" evidence=TAS

UNIPROTKB|Q71TU5 CSNK1A1 "cDNA FLJ56335, highly similar to Casein kinase I isoform alpha (EC 2.7.11.1)" [Homo sapiens (taxid:9606)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 129/261 (49%), Positives = 181/261 (69%)

Query:     1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
             ++ +  R+P  +L +E   Y+ L G  G+PH+  YG   DYN+LVM+LLGPSLEDLF +C
Sbjct:    47 LESQKARHP--QLLYESKLYKILQGGVGIPHIRWYGQEKDYNVLVMDLLGPSLEDLFNFC 104

Query:    61 SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             S+RF++KTVLMLADQMISR+E+VH K  +HRDIKPDNFLMG+  + N ++L+DFGLA  +
Sbjct:   105 SRRFTMKTVLMLADQMISRIEYVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKY 164

Query:   121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
               N      P    + LTGTARYAS+NAH  ++QS RDD+E+L Y L+YF R  LPWQ +
Sbjct:   165 RDNRTRQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGL 224

Query:   177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             K+  ++ + ++++E K++   E +C+G P EFA +L YCRGL F E P+Y  LR  FR L
Sbjct:   225 KAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRIL 284

Query:   237 LENKERCEFDLRYDWTLLERK 257
                    ++D  +DWT+L++K
Sbjct:   285 FRTLNH-QYDYTFDWTMLKQK 304

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BK63	KC1A_MOUSE	2, ., 7, ., 1, 1, ., 1	0.4942	0.9883	0.7537	yes	N/A
P67827	KC1A_BOVIN	2, ., 7, ., 1, 1, ., 1	0.4942	0.9883	0.7815	yes	N/A
P97633	KC1A_RAT	2, ., 7, ., 1, 1, ., 1	0.4942	0.9883	0.7815	yes	N/A
P67828	KC1A_RABIT	2, ., 7, ., 1, 1, ., 1	0.4942	0.9883	0.7815	yes	N/A
P67962	KC1A_CHICK	2, ., 7, ., 1, 1, ., 1	0.4942	0.9883	0.7537	yes	N/A
P42168	KC1A_CAEEL	2, ., 7, ., 1, 1, ., 1	0.4924	0.9844	0.7419	yes	N/A
Q8IHZ9	KC1_PLAF7	2, ., 7, ., 1, 1, ., 1	0.4531	0.9766	0.7770	yes	N/A
P40235	HHP1_SCHPO	2, ., 7, ., 1, 1, ., 1	0.4785	0.9805	0.6904	yes	N/A
P48729	KC1A_HUMAN	2, ., 7, ., 1, 1, ., 1	0.4942	0.9883	0.7537	yes	N/A
Q5ZLL1	KC1E_CHICK	2, ., 7, ., 1, 1, ., 1	0.4749	0.9883	0.6105	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	257
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-27
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-26
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-23
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-17
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-16
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-12
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-12
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	9e-12
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-11
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	8e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-10
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-09
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-09
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-09
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-09
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	7e-09
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	1e-08
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	1e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-08
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-08
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-07
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-07
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-07
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	2e-07
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-07
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-07
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-07
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-07
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-07
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-07
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	3e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-07
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-07
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	5e-07
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-07
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	5e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	5e-07
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	6e-07
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	8e-07
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	8e-07
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-06
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-06
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	2e-06
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-06
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-06
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-06
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-06
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	4e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-06
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-06
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	4e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-06
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	7e-06
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-05
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-05
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-05
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-05
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-05
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-05
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	4e-05
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	4e-05
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	4e-05
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	6e-05
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	6e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	6e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	8e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	8e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	8e-05
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	9e-05
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	1e-04
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-04
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	1e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	1e-04
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-04
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-04
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	2e-04
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-04
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-04
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	2e-04
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-04
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-04
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-04
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	3e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-04
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-04
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-04
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	4e-04
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	4e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	5e-04
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-04
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	6e-04
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	6e-04
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-04
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	7e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-04
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	8e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	8e-04
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	9e-04
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	9e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.001
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.001
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.001
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.001
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	0.001
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	0.001
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.001
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	0.001
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	0.001
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	0.001
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.001
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.001
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	0.001
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.002
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.002
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	0.002
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.003
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.003
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	0.003
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.003
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	0.003
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	0.003
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	0.003
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	0.004
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.004
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	0.004

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  105 bits (263), Expect = 4e-27
 Identities = 47/182 (25%), Positives = 72/182 (39%), Gaps = 12/182 (6%)

Query: 37  TSGDYNILVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIK 94
              D+  LVME       DLF Y S+    S      +A Q++  LE++H   I+HRD+K
Sbjct: 68  EDKDHLYLVMEYCEGG--DLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLK 125

Query: 95  PDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPR 153
           P+N L+        V + DFGLA            T    GT  Y +           P+
Sbjct: 126 PENILLDEN---GVVKIADFGLAKKL--LKSSSSLT-TFVGTPWYMAPEVLLGGNGYGPK 179

Query: 154 DDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
            D+ +L   L   L GK P+      ++   ++R+    L         G   E  + ++
Sbjct: 180 VDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSG-SEEAKDLIK 238

Query: 214 YC 215
            C
Sbjct: 239 KC 240

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  100 bits (252), Expect = 5e-26
 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 8/168 (4%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +K E   + ++ L  E    +KL+  P +  + G     ++  LVME   G SL+DL + 
Sbjct: 26  IKKEDSSSLLEELLREIEILKKLNH-PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKE 84

Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
              + S   +L +  Q++  LE++H   I+HRD+KP+N L  +  +   V L DFGL+  
Sbjct: 85  NEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENIL--LDSDNGKVKLADFGLSKL 142

Query: 120 FCPNCPPRIRTRGLTGTARYASVNAH-QWLDQSPRDDLEALCYTLVYF 166
              +       + + GT  Y +          S + D+ +L   L   
Sbjct: 143 LTSDKSL---LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 98.3 bits (243), Expect = 1e-23
 Identities = 56/228 (24%), Positives = 90/228 (39%), Gaps = 16/228 (7%)

Query: 2   KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC 60
           K+E     V+R   E      L+  P +  +  +        LVME + G SLEDL +  
Sbjct: 33  KLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKI 92

Query: 61  S--KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
                 S    L +  Q++S LE++H K I+HRDIKP+N L  +  +   V L+DFGLA 
Sbjct: 93  GRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENIL--LDRDGRVVKLIDFGLAK 150

Query: 119 DFCPNC---PPRIRTRGLTGTARYAS---VNAHQWLDQSPRDDLEALCYTLVYFLRGKLP 172
                              GT  Y +   +        S   D+ +L  TL   L G  P
Sbjct: 151 LLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPP 210

Query: 173 WQSIKSDNEETRM-----QRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
           ++  K+ +  ++      +  T    +    +  E      ++ L+  
Sbjct: 211 FEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKL 258

Length = 384

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 78.3 bits (194), Expect = 3e-17
 Identities = 56/220 (25%), Positives = 86/220 (39%), Gaps = 22/220 (10%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +K + ++   +R+  E    +KL   P +  +       D   LVME   G  L DL + 
Sbjct: 32  IKKKKIKKDRERILREIKILKKLKH-PNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKK 90

Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
              R S         Q++S LE++H K IVHRD+KP+N L+        V L DFGLA  
Sbjct: 91  R-GRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDED---GHVKLADFGLARQ 146

Query: 120 FCPNCPPRIRTRGLTGTARYAS---VNAHQWLDQSPRDDLEAL-CYTLVYFLRGKLPWQS 175
             P      +     GT  Y +   +    +       D+ +L    L   L GK P+  
Sbjct: 147 LDPGE----KLTTFVGTPEYMAPEVLLGKGY---GKAVDIWSLGV-ILYELLTGKPPFPG 198

Query: 176 IKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
              D      +++ + K    P        PE  + +R  
Sbjct: 199 --DDQLLELFKKIGKPKPPFPPP--EWDISPEAKDLIRKL 234

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 59/212 (27%), Positives = 90/212 (42%), Gaps = 49/212 (23%)

Query: 16  ERNFYEKLHGAPGVPHVMGYGTSGD----YNILVMELL--GPSLEDLFQYCSKR--FSLK 67
           E+    +L+G PG+  +  Y T  D    Y   V+E    G    +L QY  K      K
Sbjct: 51  EKEVLTRLNGHPGIIKL--YYTFQDEENLY--FVLEYAPNG----ELLQYIRKYGSLDEK 102

Query: 68  TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP- 126
                A +++  LE++H K I+HRD+KP+N L+   ++   + + DFG A    PN  P 
Sbjct: 103 CTRFYAAEILLALEYLHSKGIIHRDLKPENILLD--KD-MHIKITDFGTAKVLDPNSSPE 159

Query: 127 ----------------RIRTRGLTGTARYAS---VNAHQWLDQSPRDDLEAL-CYTLVY- 165
                           R R     GTA Y S   +N           DL AL C  ++Y 
Sbjct: 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPA---GKSSDLWALGC--IIYQ 214

Query: 166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP 197
            L GK P+   +  NE    Q++ +++ +  P
Sbjct: 215 MLTGKPPF---RGSNEYLTFQKILKLEYSFPP 243

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 71.0 bits (175), Expect = 1e-14
 Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 22/174 (12%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV+E    G    +LF + SK  RFS +     A +++  LE++H   I++RD+KP+N L
Sbjct: 70  LVLEYAPGG----ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENIL 125

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEAL 159
           +    +   + L DFGLA +         RT    GT  Y +             D  +L
Sbjct: 126 LDADGH---IKLTDFGLAKELSSE---GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSL 179

Query: 160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
              L   L GK P+ +   D +E   +++ +  L   P    E   PE  + + 
Sbjct: 180 GVLLYEMLTGKPPFYA--EDRKEI-YEKILKDPLRF-P----EFLSPEARDLIS 225

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 64.5 bits (158), Expect = 3e-12
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 10/81 (12%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +VME   G SL+DL +  ++  +   +  +  +++  LE++H   I+HRDIK  N L+  
Sbjct: 74  IVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL-- 131

Query: 103 RENFNT---VYLVDFGLAVDF 120
                +   V L+DFGL+   
Sbjct: 132 ----TSDGEVKLIDFGLSAQL 148

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 63.3 bits (155), Expect = 8e-12
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 9/83 (10%)

Query: 44  LVMELLGPSLEDLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           LV E       DL +Y  KR    S   +  +  Q++  L + H  +I+HRD+KP N L+
Sbjct: 75  LVFEYCD---MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI 131

Query: 101 GVRENFNTVYLVDFGLAVDFCPN 123
                   + L DFGLA  F   
Sbjct: 132 NRD---GVLKLADFGLARAFGIP 151

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 63.4 bits (154), Expect = 9e-12
 Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 12/214 (5%)

Query: 28  GVPHVMGYGT----SGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV 83
           G+P   G G+       Y  +++E L  + +++F+   K  + K +  +   M++ LE++
Sbjct: 84  GIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYI 142

Query: 84  HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP----PRIRTRGLTGTARY 139
           H   I H DIKP+N ++      N  Y++D+G+A  F  +       + +     GT  Y
Sbjct: 143 HEHGISHGDIKPENIMVDGN---NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYY 199

Query: 140 ASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA 199
           A ++AH     + R DLE+L Y ++ +   KLPW+    +       +   +K     + 
Sbjct: 200 AGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKI 259

Query: 200 ICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF 233
             +       +F+     L++ E+P+Y  L   F
Sbjct: 260 KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293

Length = 294

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 61.0 bits (148), Expect = 5e-11
 Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 18/170 (10%)

Query: 44  LVMELL-GPSLE-DLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVM L+ G  L+  ++      F     +  A Q+I  LEH+H+++IV+RD+KP+N L+ 
Sbjct: 70  LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL- 128

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY 161
             ++   V + D GLAV+         + +G  GT  Y +    Q        D  AL  
Sbjct: 129 --DDHGNVRISDLGLAVEL----KGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGC 182

Query: 162 TLVYFLRGKLPWQSIKS--DNEETRMQRVTEMKLTM----TPEA--ICEG 203
           TL   + G+ P++  K   + EE + +R  EM +      +PEA  +CE 
Sbjct: 183 TLYEMIAGRSPFRQRKEKVEKEELK-RRTLEMAVEYPDKFSPEAKDLCEA 231

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 60.4 bits (147), Expect = 8e-11
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)

Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +LVME +   L ++ +   +      V      ++  + ++H   I+HRD+KP N L+  
Sbjct: 75  VLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA 134

Query: 103 RENFNTVYLVDFGLAVDF 120
                 + + DFGLA  F
Sbjct: 135 DG---VLKIADFGLARLF 149

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 58.0 bits (141), Expect = 5e-10
 Identities = 48/185 (25%), Positives = 70/185 (37%), Gaps = 30/185 (16%)

Query: 41  YNILVMELL-GPSLEDL---FQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
            NI  +E + G SL  L   F     +     +     Q++  L ++H   IVHRDIK  
Sbjct: 76  LNIF-LEYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGA 130

Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS---VNAHQWLDQSPR 153
           N L  V  +   V L DFG A            T  + GT  + +   +   +       
Sbjct: 131 NIL--VDSDGV-VKLADFGCAKRLGDIETGEG-TGSVRGTPYWMAPEVIRGEE---YGRA 183

Query: 154 DDLEAL-CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA--ICEGTPPEFAE 210
            D+ +L C T++    GK PW           M  +   K+  + E   I E    E  +
Sbjct: 184 ADIWSLGC-TVIEMATGKPPW-----SELGNPMAAL--YKIGSSGEPPEIPEHLSEEAKD 235

Query: 211 FLRYC 215
           FLR C
Sbjct: 236 FLRKC 240

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 35/210 (16%)

Query: 35  YGT---SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-KIV 89
           YG    +GD +I  ME + G SL+ + +    R   + +  +A  ++  L ++H K KI+
Sbjct: 65  YGAFYNNGDISIC-MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKII 123

Query: 90  HRDIKPDNFLMGVRENFNTVYLVDFG--------LAVDFCPNCPPRIRTRGLTGTARYAS 141
           HRD+KP N L+  R     + L DFG        LA  F              GT+ Y +
Sbjct: 124 HRDVKPSNILVNSR---GQIKLCDFGVSGQLVNSLAKTF-------------VGTSSYMA 167

Query: 142 VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEE--TRMQRVTEMKLTMTPEA 199
               Q  D S + D+ +L  +L+    G+ P+       +     +Q +        P  
Sbjct: 168 PERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSG 227

Query: 200 ICEGTPPEFAEFLRYCRGLAFSEEPNYGKL 229
                 P+F +F+  C      E P+Y +L
Sbjct: 228 K---FSPDFQDFVNLCLIKDPRERPSYKEL 254

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV EL+  +L +L +   +    K V     Q++  L+H+HR  I HRDIKP+N L+   
Sbjct: 77  LVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI--- 133

Query: 104 ENFNTVYLVDFG 115
              + + L DFG
Sbjct: 134 -KDDILKLADFG 144

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)

Query: 30  PHVMG----YGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G    +G   + N LV E +   LE + +  S   +   +       +  LE++H 
Sbjct: 62  PNIIGLLDVFGHKSNIN-LVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS 120

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
             I+HRD+KP+N L+    +   + L DFGLA  F
Sbjct: 121 NWILHRDLKPNNLLIA---SDGVLKLADFGLARSF 152

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 21/190 (11%)

Query: 43  ILVMELL-GPSLEDLFQYCSKRFSLKTVLML-ADQMISRLEHVHRKKIVHRDIKPDNFLM 100
            + ME   G +LE+L ++   R   + V+ +   Q++  L ++H   IVHRDIKP N  +
Sbjct: 75  YIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL 132

Query: 101 GVRENFNTVY-LVDFGLAVDFCPNC-PPRIRTRGLTGTARYAS--VNAHQWLDQSPR-DD 155
                 N V  L DFG AV    N        + L GT  Y +  V          R  D
Sbjct: 133 D----HNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAAD 188

Query: 156 LEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
           + +L   ++    GK PW  +  DNE   M  V        P+++     PE  +FL  C
Sbjct: 189 IWSLGCVVLEMATGKRPWSEL--DNEFQIMFHVGAGHKPPIPDSL--QLSPEGKDFLDRC 244

Query: 216 RGLAFSEEPN 225
                  +P 
Sbjct: 245 ----LESDPK 250

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 13/152 (8%)

Query: 39  GDYNILVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
            +   LV++LL     DL  + S+  +FS + V     +++  LE++H K I+HRDIKPD
Sbjct: 72  EENMYLVVDLLLGG--DLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPD 129

Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N L+   +    V++ DF +A        P   T   +GT  Y +         S   D 
Sbjct: 130 NILL---DEQGHVHITDFNIATKV----TPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDW 182

Query: 157 EALCYTLVYFLRGKLPWQ--SIKSDNEETRMQ 186
            +L  T    LRGK P++  S    ++    Q
Sbjct: 183 WSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ 214

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 54.8 bits (132), Expect = 7e-09
 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 8/86 (9%)

Query: 37  TSGDYNILVMELL-GPSLEDLFQYCSK---RFSLKTVLMLADQMISRLEHVHR-KKIVHR 91
              D   +VM+L+ G  L + F    +   RF+ + +  +  QM+  L ++H+ K+IVHR
Sbjct: 79  LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHR 138

Query: 92  DIKPDNFLMGVRENFNTVYLVDFGLA 117
           D+ P+N ++G  +    V + DFGLA
Sbjct: 139 DLTPNNIMLGEDDK---VTITDFGLA 161

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 54.5 bits (131), Expect = 1e-08
 Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 15/137 (10%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+IS LEH+H+++I++RD+KP+N L+   +N   V + D GLAV+       + +T+G  
Sbjct: 105 QIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDG---QSKTKGYA 158

Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI--KSDNEETRMQRVTE-- 190
           GT  + +    Q  +     D  AL  TL   +  + P+++   K +N+E + QR+    
Sbjct: 159 GTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK-QRILNDS 217

Query: 191 ----MKLTMTPEAICEG 203
                K +   ++ CE 
Sbjct: 218 VTYPDKFSPASKSFCEA 234

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 53.7 bits (130), Expect = 1e-08
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 6/76 (7%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-KIVHRDIKPDNFLMG 101
           +V+E + G SL DL +   K      +  +A Q++  L+++H K  I+HRDIKP N L+ 
Sbjct: 76  IVLEYMDGGSLADLLKKVGK-IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN 134

Query: 102 VRENFNTVYLVDFGLA 117
            +     V + DFG++
Sbjct: 135 SKGE---VKIADFGIS 147

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 54.2 bits (130), Expect = 1e-08
 Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 33/153 (21%)

Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           FS   +   A ++I  LEH+H + +V+RD+KP N L+   +    V + D GLA DF   
Sbjct: 94  FSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK 150

Query: 124 CPPRIRTRGLTGTARYASVNAHQWL-----------DQSPRDDLEALCYTLVYFLRGKLP 172
            P             +ASV  H ++           D S   D  +L   L   LRG  P
Sbjct: 151 KP-------------HASVGTHGYMAPEVLQKGVAYDSSA--DWFSLGCMLFKLLRGHSP 195

Query: 173 WQSIKSDNEETRMQRVTEMKLTMTPEAICEGTP 205
           ++  K+ ++      +  M LTM  E     +P
Sbjct: 196 FRQHKTKDKHE----IDRMTLTMAVELPDSFSP 224

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 53.7 bits (129), Expect = 1e-08
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 44  LVMELL-GPSLEDLFQ-YCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME   G +L +  Q  C+      T+L    Q++  L HVH K I+HRD+K  N L+ 
Sbjct: 76  IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD 135

Query: 102 VRENFNTVYLVDFGLA 117
             +    V + DFG++
Sbjct: 136 KHK--MVVKIGDFGIS 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 39/136 (28%)

Query: 1   MKVEP-----VRNPVQRLFWERNFYEKLHGAPGVPHV--MGYGTSGDYNI-LVMELL-GP 51
           +KV        +N V ++  ER+   +       P+V  + Y   G  N+ LVME L G 
Sbjct: 23  IKVIKKADMIRKNQVDQVLTERDILSQAQS----PYVVKLYYSFQGKKNLYLVMEYLPGG 78

Query: 52  SL-----------EDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
            L           ED+ +                +++  LE++H   I+HRD+KPDN L+
Sbjct: 79  DLASLLENVGSLDEDVARIYIA------------EIVLALEYLHSNGIIHRDLKPDNILI 126

Query: 101 GVRENFNTVYLVDFGL 116
              ++   + L DFGL
Sbjct: 127 ---DSNGHLKLTDFGL 139

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 52.9 bits (128), Expect = 2e-08
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 11/70 (15%)

Query: 55  DLFQYCSKR------FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN-FLMGVRENFN 107
           DL Q   K+      F  + +L    Q+   L+++H +KI+HRDIKP N FL     +  
Sbjct: 85  DLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT----SNG 140

Query: 108 TVYLVDFGLA 117
            V L DFG++
Sbjct: 141 LVKLGDFGIS 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME + G SL D+      R +   +  +  +++  LE++H + ++HRDIK DN
Sbjct: 87  GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDN 146

Query: 98  FLMGVRENFNTVYLVDFGLAV 118
            L+       +V L DFG A 
Sbjct: 147 ILLSKD---GSVKLADFGFAA 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 51.3 bits (122), Expect = 1e-07
 Identities = 50/181 (27%), Positives = 79/181 (43%), Gaps = 20/181 (11%)

Query: 39  GDYNILVMELL-GPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           GD   +VME L G SL D+  + C     +  V     + +  LE +H  +++HRDIK D
Sbjct: 88  GDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV---CRECLQALEFLHANQVIHRDIKSD 144

Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVNAHQWLDQSPRDD 155
           N L+G+     +V L DFG    FC    P    R  + GT  + +          P+ D
Sbjct: 145 NVLLGMD---GSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 197

Query: 156 LEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPE-AICEGTPPEFAEFLRY 214
           + +L    +  + G+ P+ +      E  ++ +  +    TPE    E   P F +FL  
Sbjct: 198 IWSLGIMAIEMVEGEPPYLN------ENPLRALYLIATNGTPELQNPEKLSPIFRDFLNR 251

Query: 215 C 215
           C
Sbjct: 252 C 252

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 12/115 (10%)

Query: 7   RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVME-LLG---PSLEDLFQYCSK 62
           +N V ++  ER+    L  +P + H+     S +   LVME L+G    SL  ++ Y  +
Sbjct: 45  KNMVHQVQAERDAL-ALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDE 103

Query: 63  RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
             ++K +     ++   L+++HR  I+HRD+KPDN L+    N   + L DFGL+
Sbjct: 104 EMAVKYI----SEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 3/54 (5%)

Query: 65  SLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
           S+   L +  ++ + +E+VH K ++HRD+KPDN L+G+   F  V ++D+G A+
Sbjct: 111 SVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGL---FGEVVILDWGAAI 161

Length = 932

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 11/107 (10%)

Query: 35  YGTSGDYNILVMELLGPSLEDLFQY--CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           + T  D   L M +      +LF Y   S RFS  T L  A +++  LE++H K+IV+RD
Sbjct: 67  FWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRD 126

Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +KP+N L+  +E    + L DFG A         R RT  L GT  Y
Sbjct: 127 LKPENILLD-KEGH--IKLTDFGFAKKL------RDRTWTLCGTPEY 164

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 18/163 (11%)

Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           F  +  +  A ++   LE +HR++IV+RD+KP+N L+   +++  + + D GLAV+    
Sbjct: 99  FDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEI--- 152

Query: 124 CPPRIRTRGLTGTARYAS--VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQS----IK 177
            P     RG  GT  Y +  V  ++    SP  D   L   +   + GK P++     +K
Sbjct: 153 -PEGETIRGRVGTVGYMAPEVVKNERYTFSP--DWWGLGCLIYEMIEGKSPFRQRKEKVK 209

Query: 178 SDNEETRMQRVTEM---KLTMTPEAICEGTPPEFAEFLRYCRG 217
            +  E R++   E    K +    +IC     +   F   CRG
Sbjct: 210 REEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRG 252

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 10/78 (12%)

Query: 44  LVMELLGPSLEDLFQYCSKR----FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            V E +     +L+Q    R    FS   +  +  Q++  L H+H+    HRD+KP+N L
Sbjct: 75  FVFEYME---GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLL 131

Query: 100 MGVRENFNTVYLVDFGLA 117
           +        V + DFGLA
Sbjct: 132 V---SGPEVVKIADFGLA 146

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 50.8 bits (121), Expect = 2e-07
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E L   L+     C    S+  V +   Q++  L + H++KI+HRD+KP N L+  +
Sbjct: 80  LVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEK 139

Query: 104 ENFNTVYLVDFGLA 117
                  L DFGLA
Sbjct: 140 GELK---LADFGLA 150

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 3/46 (6%)

Query: 72  LADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +A Q++S + ++HR+ IVHRDIKP N L+   +N   V + DFG++
Sbjct: 173 VARQILSGIAYLHRRHIVHRDIKPSNLLINSAKN---VKIADFGVS 215

Length = 353

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 21/89 (23%)

Query: 38  SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISR--------LEHVHRKKI 88
           S DY  LVME L G     L         +KT+  L +    +        +E +H++ I
Sbjct: 68  SKDYLYLVMEYLNGGDCASL---------IKTLGGLPEDWAKQYIAEVVLGVEDLHQRGI 118

Query: 89  VHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +HRDIKP+N L+   +    + L DFGL+
Sbjct: 119 IHRDIKPENLLI---DQTGHLKLTDFGLS 144

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 44  LVMELLGPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           LV E +   L      C K     +T+  L  Q++  ++ +H  +IVHRD+KP N L+  
Sbjct: 83  LVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS 142

Query: 103 RENFNTVYLVDFGLA 117
                 V + DFGLA
Sbjct: 143 D---GQVKIADFGLA 154

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 63  RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +F+   +     Q++  L+++H   I+HRDIK  N L+    N   + L DFGLA
Sbjct: 96  KFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLA 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E +  +L +L +          V     Q++  + + H   I+HRDIKP+N L  V 
Sbjct: 77  LVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENIL--VS 134

Query: 104 ENFNTVYLVDFGLA 117
           E+   + L DFG A
Sbjct: 135 ES-GVLKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 50.3 bits (120), Expect = 3e-07
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 6/66 (9%)

Query: 55  DLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYL 111
           DL+ Y   R     L  V  +A Q++S ++++H + I+HRDIK +N L+   E+   + L
Sbjct: 245 DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPED---ICL 301

Query: 112 VDFGLA 117
            DFG A
Sbjct: 302 GDFGAA 307

Length = 461

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 49.5 bits (119), Expect = 4e-07
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 13/98 (13%)

Query: 44  LVMELLGPSLEDLFQYC--SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVME +     +LF +   S RF        A Q++  LE++H   IV+RD+KP+N L+ 
Sbjct: 78  LVMEYVPGG--ELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD 135

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
                  + + DFG    F      R  T  L GT  Y
Sbjct: 136 SDGY---IKITDFG----FAKRVKGRTYT--LCGTPEY 164

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E +   L  L +   +      +     Q++  L   H   I+HRD+KP+N L+   
Sbjct: 75  LVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE 134

Query: 104 ENFNTVYLVDFGLA 117
                + L DFGLA
Sbjct: 135 G---VLKLADFGLA 145

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 49.2 bits (117), Expect = 5e-07
 Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 36/171 (21%)

Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           DL  + S+   FS K +   A ++I  LEH+H + +V+RD+KP N L+   +    V + 
Sbjct: 83  DLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRIS 139

Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-----------DQSPRDDLEALCY 161
           D GLA DF    P             +ASV  H ++           D S   D  +L  
Sbjct: 140 DLGLACDFSKKKP-------------HASVGTHGYMAPEVLQKGTAYDSSA--DWFSLGC 184

Query: 162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
            L   LRG  P++  K+ ++      +  M LT+  E + +   PE    L
Sbjct: 185 MLFKLLRGHSPFRQHKTKDK----HEIDRMTLTVNVE-LPDSFSPELKSLL 230

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 9/102 (8%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  +E++H   IVHRDIK  N L   R++   V L DFG +      C      + +T
Sbjct: 112 QILEGVEYLHSNMIVHRDIKGANIL---RDSAGNVKLGDFGASKRLQTICSSGTGMKSVT 168

Query: 135 GTARYAS---VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
           GT  + S   ++   +     + D+ ++  T+V  L  K PW
Sbjct: 169 GTPYWMSPEVISGEGY---GRKADVWSVGCTVVEMLTEKPPW 207

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 49.6 bits (118), Expect = 5e-07
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E L   L+     C    S+  V +   Q++  L + HR+K++HRD+KP N L+  R
Sbjct: 81  LVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINER 140

Query: 104 ENFNTVYLVDFGLA 117
                  L DFGLA
Sbjct: 141 GELK---LADFGLA 151

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 49.3 bits (118), Expect = 5e-07
 Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 30/220 (13%)

Query: 22  KLHGAPGVPHVMGYGTSGDYNILV-MELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL 80
           K H  P +    GY  + D ++ + MEL+   L+ L +          +  +   ++  L
Sbjct: 69  KSHDCPYIVKCYGYFIT-DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKAL 127

Query: 81  EHVHRKK-IVHRDIKPDNFLMGVRENFNTVYLVDFGLA---VDFCPNCPPRIRTRGLTGT 136
            ++  K  ++HRD+KP N L+    N   V L DFG++   VD       + +TR   G 
Sbjct: 128 HYLKEKHGVIHRDVKPSNILLDASGN---VKLCDFGISGRLVD------SKAKTRS-AGC 177

Query: 137 ARYASVNAHQWLDQSP-------RDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVT 189
           A Y    A + +D          R D+ +L  +LV    G+ P+++ K++ E   + ++ 
Sbjct: 178 AAYM---APERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE--VLTKIL 232

Query: 190 EMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKL 229
           + +    P    EG  P+F  F+  C      + P Y +L
Sbjct: 233 QEEPPSLPPN--EGFSPDFCSFVDLCLTKDHRKRPKYREL 270

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 49.3 bits (117), Expect = 5e-07
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)

Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  S   GD   +VME L G SL D+  + C     +  V     + +  LE +H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 133

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVN 143
             +++HRDIK DN L+G+     +V L DFG    FC    P    R  + GT  + +  
Sbjct: 134 SNQVIHRDIKSDNILLGMD---GSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPE 186

Query: 144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                   P+ D+ +L    +  + G+ P+
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E L   L+     C    ++  V +   Q++  L + HR+K++HRD+KP N L+  R
Sbjct: 81  LVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINER 140

Query: 104 ENFNTVYLVDFGLA 117
                  L DFGLA
Sbjct: 141 GELK---LADFGLA 151

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 48.8 bits (117), Expect = 8e-07
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VME +   L+ L +   + F    V  L  Q++S + H+H   I+HRD+K  N L+   
Sbjct: 83  MVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL--- 139

Query: 104 ENFNTVYLVDFGLA 117
            N   + + DFGLA
Sbjct: 140 NNRGILKICDFGLA 153

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 8e-07
 Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 31/146 (21%)

Query: 7   RNPVQRLFWERNFYEKL-HGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS---- 61
           RN V+R+  E+     L H  P +P +     +  Y  LVM+           YC     
Sbjct: 42  RNKVKRVLTEQEILATLDH--PFLPTLYASFQTETYLCLVMD-----------YCPGGEL 88

Query: 62  ---------KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
                    K  S +     A +++  LE++H   IV+RD+KP+N L  + E+   + L 
Sbjct: 89  FRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENIL--LHES-GHIMLS 145

Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTAR 138
           DF L+       PP +      G+ R
Sbjct: 146 DFDLSKQ-SDVEPPPVSKALRKGSRR 170

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)

Query: 30  PHVM---GYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISR-LEHVH 84
           P+V+   G  T  +   +VME + G  L    +    + SL  +L  A Q I+R +E++ 
Sbjct: 61  PNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQ-IARGMEYLE 119

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
            K  +HRD+   N L+G       V + DFGL+ D
Sbjct: 120 SKNFIHRDLAARNCLVG---ENLVVKISDFGLSRD 151

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
            ++   E++H + I++RD+KP+N L+    +   V LVDFG A
Sbjct: 101 CVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFA 140

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 18/148 (12%)

Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           F  +  L  A +++  LE +HR+  V+RD+KP+N L+   +++  + + D GLAV     
Sbjct: 99  FEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKI--- 152

Query: 124 CPPRIRTRGLTGTARYAS--VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQS----IK 177
            P     RG  GT  Y +  V  +Q    SP  D   L   +   + G+ P++     +K
Sbjct: 153 -PEGESIRGRVGTVGYMAPEVLNNQRYTLSP--DYWGLGCLIYEMIEGQSPFRGRKEKVK 209

Query: 178 SDNEETRMQRVTEM---KLTMTPEAICE 202
            +  + R+    E+   K +   ++IC+
Sbjct: 210 REEVDRRVLETEEVYSAKFSEEAKSICK 237

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 47.4 bits (112), Expect = 2e-06
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)

Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  S   GD   +VME L G SL D+  + C     +  V     + +  L+ +H
Sbjct: 76  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALDFLH 132

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVN 143
             +++HRDIK DN L+G+     +V L DFG    FC    P    R  + GT  + +  
Sbjct: 133 SNQVIHRDIKSDNILLGMD---GSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPE 185

Query: 144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                   P+ D+ +L    +  + G+ P+
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)

Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  S   GD   +VME L G SL D+  + C     +  V     + +  LE +H
Sbjct: 76  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 132

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVN 143
             +++HRDIK DN L+G+     +V L DFG    FC    P    R  + GT  + +  
Sbjct: 133 SNQVIHRDIKSDNILLGMD---GSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPE 185

Query: 144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                   P+ D+ +L    +  + G+ P+
Sbjct: 186 VVTRKAYGPKVDIWSLGIMAIEMVEGEPPY 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 13/90 (14%)

Query: 35  YGT-----SGDYNILVMELL-GPSLEDLFQYCSK---RFSLKTVLMLADQMISRLEHVHR 85
           YG      S    I  ME   G SL+ +++   K   R   K +  +A+ ++  L ++H 
Sbjct: 65  YGAFLDESSSSIGIA-MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS 123

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
           +KI+HRDIKP N L+  +     V L DFG
Sbjct: 124 RKIIHRDIKPSNILLTRKGQ---VKLCDFG 150

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 3/46 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           Q++  L ++H + ++HRDIK  N L         V L DFG+A   
Sbjct: 107 QVLQGLAYLHEQGVIHRDIKAANILTTKD---GVVKLADFGVATKL 149

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM--- 100
           LV E     L  L    + +F+L  +  +   +++ L ++HR KI+HRD+K  N L+   
Sbjct: 96  LVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKD 155

Query: 101 GVRENFNTVYLVDFGLAVDF 120
           G+      + L DFGLA  F
Sbjct: 156 GI------LKLADFGLARAF 169

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 25/193 (12%)

Query: 33  MGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLK----TVLMLADQMISRLEHVHRKK 87
           +G  +   +  + ME + G SL  L +  SK   LK    T++    Q++  L+++H  +
Sbjct: 71  LGSDSENGFFKIFMEQVPGGSLSALLR--SKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ 128

Query: 88  IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW 147
           IVHRDIK DN L  V      V + DFG +       P    T   TGT +Y    A + 
Sbjct: 129 IVHRDIKGDNVL--VNTYSGVVKISDFGTSKRLAGINPC---TETFTGTLQYM---APEV 180

Query: 148 LDQSPRD-----DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICE 202
           +D+ PR      D+ +L  T+V    GK P+  I+    +  M +V   K  + PE I E
Sbjct: 181 IDKGPRGYGAPADIWSLGCTIVEMATGKPPF--IELGEPQAAMFKVGMFK--IHPE-IPE 235

Query: 203 GTPPEFAEFLRYC 215
               E   F+  C
Sbjct: 236 SLSAEAKNFILRC 248

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 46.9 bits (112), Expect = 3e-06
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 30  PHVMGYGTSG--DYNI-LVMELLGP-SLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++ Y  S   + ++ +VME  G  S+ D+ +  +K  + + +  +  Q +  LE++H 
Sbjct: 58  PYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHS 117

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
            K +HRDIK  N L+          L DFG++
Sbjct: 118 NKKIHRDIKAGNILLNEEGQ---AKLADFGVS 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 57/243 (23%), Positives = 96/243 (39%), Gaps = 25/243 (10%)

Query: 3   VEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNI-----LVMELL-GPSLEDL 56
           ++P+ +  + +  E N  + L   P V    G     D  +     LV+EL  G S+ +L
Sbjct: 55  LDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTEL 114

Query: 57  FQ---YCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVD 113
            +    C +R     +  +    +  L+H+H  +I+HRD+K +N L+        V LVD
Sbjct: 115 VKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTE---GGVKLVD 171

Query: 114 FGLAVDFCPNCPPRIRTRGLTGTARYAS---VNAHQWLDQS--PRDDLEALCYTLVYFLR 168
           FG++         R+R     GT  + +   +   Q  D S   R D+ +L  T +    
Sbjct: 172 FGVSAQLTST---RLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD 228

Query: 169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGK 228
           G  P   +       ++ R     L + PE  C      F  F+  C    F   P+   
Sbjct: 229 GDPPLFDMHPVKTLFKIPRNPPPTL-LHPEKWCRS----FNHFISQCLIKDFEARPSVTH 283

Query: 229 LRD 231
           L +
Sbjct: 284 LLE 286

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 46.7 bits (112), Expect = 3e-06
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 7/92 (7%)

Query: 30  PHV---MGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P++   +G  T G+   +V E + G  L D  +   ++ +LK +L +A Q+   +E++  
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLES 120

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           K  VHRD+   N L  V EN   V + DFGL+
Sbjct: 121 KNFVHRDLAARNCL--VTEN-LVVKISDFGLS 149

Length = 258

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 47.0 bits (111), Expect = 4e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           Q+++ L  +HR  IVHRDIKP+N L+ V      V ++DFG AVD C
Sbjct: 317 QVLTGLRKLHRIGIVHRDIKPENLLVTVD---GQVKIIDFGAAVDMC 360

Length = 507

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)

Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVME +     DL     +   F  +T      +++  L+ VH+   +HRDIKPDN L+ 
Sbjct: 78  LVMEYMPGG--DLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID 135

Query: 102 VRENFNTVYLVDFGLAVDF 120
              +   + L DFGL    
Sbjct: 136 ADGH---IKLADFGLCKKM 151

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 5/74 (6%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ +   ++ S   +  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 97  LVTHLMGADLNNIVK--CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSN--IAVN 152

Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 153 EDCE-LKILDFGLA 165

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 46.5 bits (110), Expect = 4e-06
 Identities = 62/243 (25%), Positives = 100/243 (41%), Gaps = 29/243 (11%)

Query: 3   VEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYG-------TSGDYNILVMELL-GPSLE 54
           ++P+ +  + +  E N  + L   P V  V  YG        +GD   LV+EL  G S+ 
Sbjct: 51  LDPIHDIDEEIEAEYNILKALSDHPNV--VKFYGMYYKKDVKNGDQLWLVLELCNGGSVT 108

Query: 55  DLFQYCSKRFSLKTVLMLA---DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYL 111
           DL +   KR       ++A    + +  L+H+H  K +HRD+K +N L+        V L
Sbjct: 109 DLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE---GGVKL 165

Query: 112 VDFGLAVDFCPNCPPRIRTRGLTGTARYAS---VNAHQWLDQS--PRDDLEALCYTLVYF 166
           VDFG++         R+R     GT  + +   +   Q LD +   R D+ +L  T +  
Sbjct: 166 VDFGVSAQLTST---RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIEL 222

Query: 167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY 226
             G  P   +       ++ R     L   PE        EF +F+R C    + + P  
Sbjct: 223 GDGDPPLADLHPMRALFKIPRNPPPTLHQ-PELWSN----EFNDFIRKCLTKDYEKRPTV 277

Query: 227 GKL 229
             L
Sbjct: 278 SDL 280

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  + ++H   I+HRDIK  N L+   +N   + + DFGLA  +    PP  +  G  
Sbjct: 123 QLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFGLARPY-DGPPPNPKGGGGG 178

Query: 135 GTARYASVNAHQW 147
           GT +Y ++   +W
Sbjct: 179 GTRKYTNLVVTRW 191

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 45.9 bits (109), Expect = 6e-06
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)

Query: 27  PGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQ-YCSKRFSLKTVLMLADQMISRLEHVH 84
           P +   +G     D   + +EL+ G SL  L + Y S    +  + +   Q++  LE++H
Sbjct: 62  PNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPV--IRLYTRQILLGLEYLH 119

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
            +  VHRDIK  N L+   +    V L DFG+A
Sbjct: 120 DRNTVHRDIKGANILV---DTNGVVKLADFGMA 149

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 46.0 bits (109), Expect = 7e-06
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 16/98 (16%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
            V ELLG  L  L    S+    + +     Q++  L++VH   +VHRD+KP N L  + 
Sbjct: 87  FVTELLGTDLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNIL--IN 142

Query: 104 ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG--TARY 139
           EN + + + DFGLA         RI+   +TG  + RY
Sbjct: 143 ENCD-LKICDFGLA---------RIQDPQMTGYVSTRY 170

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 45.8 bits (109), Expect = 7e-06
 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 15/97 (15%)

Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLFQYCSKR-----FSLKTVLMLADQMISRL 80
           P+V+ Y TS   GD   LVM  L G SL D+ +    R       + TVL    +++  L
Sbjct: 59  PNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVL---KEVLKGL 115

Query: 81  EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           E++H    +HRDIK  N L+G  E+  +V + DFG++
Sbjct: 116 EYLHSNGQIHRDIKAGNILLG--ED-GSVKIADFGVS 149

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 7/68 (10%)

Query: 54  EDLFQYCSKR----FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTV 109
           +DL  Y  K        +T+  L  Q +  L+ +H   IVHRD+KP+N L+        V
Sbjct: 91  QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GQV 147

Query: 110 YLVDFGLA 117
            L DFGLA
Sbjct: 148 KLADFGLA 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 11/129 (8%)

Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           F     +  A ++   LE +H+++IV+RD+KP+N L+   ++   + + D GLAV    +
Sbjct: 99  FEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAV----H 151

Query: 124 CPPRIRTRGLTGTARYAS--VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
            P     +G  GT  Y +  V  ++    SP  D  AL   L   + G+ P+Q  K   +
Sbjct: 152 VPEGQTIKGRVGTVGYMAPEVVKNERYTFSP--DWWALGCLLYEMIAGQSPFQQRKKKIK 209

Query: 182 ETRMQRVTE 190
              ++R+ +
Sbjct: 210 REEVERLVK 218

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 3/92 (3%)

Query: 36  GTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKP 95
           G   D   LVME     L  L       FS   V  L  Q++  L+++H   I+HRD+K 
Sbjct: 77  GKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKV 136

Query: 96  DNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR 127
            N L+  +     + + DFGLA  +     P 
Sbjct: 137 SNLLLTDK---GCLKIADFGLARTYGLPAKPM 165

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 23/147 (15%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  L ++H + I+HRDIK  N L+   +N   + + DFG++     N          T
Sbjct: 114 QILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKLEANS-----LSTKT 165

Query: 135 GTARYASVNAHQWL--------DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQ 186
             AR +   +  W+          + + D+ +L   +V  L GK P+         T++Q
Sbjct: 166 NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC------TQLQ 219

Query: 187 RVTEMKLTMTPEAICEGTPPEFAEFLR 213
            + ++    +PE I      E  +FL 
Sbjct: 220 AIFKIGENASPE-IPSNISSEAIDFLE 245

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 55  DLFQYC--SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           DLF Y   S    L+  + +  +++  L ++H + I+HRD+K +N  +   EN     L 
Sbjct: 171 DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPEN---AVLG 227

Query: 113 DFGLA--VDFCPNCP 125
           DFG A  +D  P+ P
Sbjct: 228 DFGAACKLDAHPDTP 242

Length = 392

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 6/66 (9%)

Query: 55  DLFQY---CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYL 111
           DL QY   C    S+  V +   Q++  L + H+++++HRD+KP N L+  R       L
Sbjct: 88  DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELK---L 144

Query: 112 VDFGLA 117
            DFGLA
Sbjct: 145 ADFGLA 150

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 5/68 (7%)

Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           +LF + S+R  F  + V + + +++  LEH+H+  I++RDIK +N L+   ++   V L 
Sbjct: 91  ELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLT 147

Query: 113 DFGLAVDF 120
           DFGL+ +F
Sbjct: 148 DFGLSKEF 155

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           Q++  L+++H   ++HRD+KP N L  V  N   + + DFGLA
Sbjct: 111 QILRGLKYLHSANVIHRDLKPSNIL--VNSN-CDLKICDFGLA 150

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E     L+  F  C+     + V     Q++  L   H   ++HRD+KP N L+   
Sbjct: 76  LVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN 135

Query: 104 ENFNTVYLVDFGLAVDF 120
                + L DFGLA  F
Sbjct: 136 ---GELKLADFGLARAF 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)

Query: 59  YCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
           Y  + F+   V +   +++  L+H+H+  I++RDIK +N L+   ++   V L DFGL+ 
Sbjct: 97  YQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSK 153

Query: 119 DFCPNCPPRIRTRGLTGTARYAS 141
           +F        R     GT  Y +
Sbjct: 154 EFLA--EEEERAYSFCGTIEYMA 174

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           Q++  + + H  +++HRD+KP N L+  R   N + L DFGLA  F
Sbjct: 110 QILRGIAYCHSHRVLHRDLKPQNLLIDRRT--NALKLADFGLARAF 153

Length = 294

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 10/94 (10%)

Query: 30  PHVMGYGTSGDYN---ILVMELL-GPSLEDLFQYCSKRFSL---KTVLMLADQMISRLEH 82
           P+V+ Y  S   N    +V+EL     L  + ++  K+  L   +T+     Q+ S LEH
Sbjct: 62  PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121

Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGL 116
           +H K+I+HRDIKP N  +        V L D GL
Sbjct: 122 MHSKRIMHRDIKPANVFITAT---GVVKLGDLGL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 55  DLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYL 111
           DL+ Y +KR     +   L++  Q++  L ++H ++I+HRD+K +N  +    + + V +
Sbjct: 142 DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCI 198

Query: 112 VDFGLAVDFCPNCPPRIRTRGLTGT 136
            D G A    P   P     GL GT
Sbjct: 199 GDLGAAQ--FPVVAPAF--LGLAGT 219

Length = 357

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 43.4 bits (102), Expect = 6e-05
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVM  +G  L  L ++  ++ S   +  L  QM+  L+++H   I+HRD+KP N  + V 
Sbjct: 97  LVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGN--LAVN 152

Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 153 EDCE-LKILDFGLA 165

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 48/199 (24%), Positives = 85/199 (42%), Gaps = 34/199 (17%)

Query: 46  MELLGPSLEDLFQ--YCSKRFSLKTVL-MLADQMISRLEHVHRK-KIVHRDIKPDNFLMG 101
           ME++  SL+  ++  Y       + +L  +A  ++  LE++H K  ++HRD+KP N L+ 
Sbjct: 79  MEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN 138

Query: 102 VRENFNTVYLVDFG--------LAVDFCPNCPPRI---RTRGLTGTARYASVNAHQWLDQ 150
                  V L DFG        +A      C P +   R         Y           
Sbjct: 139 RNGQ---VKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY----------- 184

Query: 151 SPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAE 210
             + D+ +L  T++    G+ P+     D+ +T  Q++ ++    +P+   E   PEF +
Sbjct: 185 DVKSDVWSLGITMIELATGRFPY-----DSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQD 239

Query: 211 FLRYCRGLAFSEEPNYGKL 229
           F+  C    + E PNY +L
Sbjct: 240 FVNKCLKKNYKERPNYPEL 258

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 43.0 bits (101), Expect = 6e-05
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 7/87 (8%)

Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           ++F +  +R  FS   V   + ++I  LEH+H+  IV+RDIK +N L+   ++   V L 
Sbjct: 91  EMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLT 147

Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTARY 139
           DFGL+ +F      + RT    GT  Y
Sbjct: 148 DFGLSKEFLSE--EKERTYSFCGTIEY 172

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 43/205 (20%), Positives = 79/205 (38%), Gaps = 18/205 (8%)

Query: 30  PHVMGYGTS----GDYNILVMELLGPSLEDLFQ-YCSKRFSLKTVLMLADQMISRLEHVH 84
            +++ Y  S    G  NI++       L  L +    +      V     Q++  L H+H
Sbjct: 59  SYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH 118

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            KKI+HRDIK  N  +   +N   V + D G+A     N         + GT  Y S   
Sbjct: 119 SKKILHRDIKSLNLFLDAYDN---VKIGDLGVAKLLSDN---TNFANTIVGTPYYLSPEL 172

Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +    + + D+ AL   L     GK P+    ++N+   + ++           + +  
Sbjct: 173 CEDKPYNEKSDVWALGVVLYECCTGKHPFD---ANNQGALILKIIRGVF----PPVSQMY 225

Query: 205 PPEFAEFLRYCRGLAFSEEPNYGKL 229
             + A+ +  C    + + P+  +L
Sbjct: 226 SQQLAQLIDQCLTKDYRQRPDTFQL 250

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 44  LVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMISR-LEHVHRKKIVHRDIKPDNFLM 100
           +VME + G  L D  +    K  SL  +L  A Q I+R +E++  K  +HRD+   N L+
Sbjct: 78  IVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQ-IARGMEYLESKNFIHRDLAARNCLV 136

Query: 101 GVRENFNTVYLVDFGLAVD 119
           G       V + DFGL+ D
Sbjct: 137 G---ENLVVKISDFGLSRD 152

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 23/94 (24%)

Query: 32  VMGYGTSGDYNILVMELLGPSLEDLFQYCSK---RFSLKTVLMLADQMISRLEHVHRK-- 86
           VM Y   GD            L  L Q C K       + +  +  Q++  L   H +  
Sbjct: 79  VMEYCEGGD------------LAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSD 126

Query: 87  ---KIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
               ++HRD+KP N  +    N   V L DFGLA
Sbjct: 127 PGNTVLHRDLKPANIFLDANNN---VKLGDFGLA 157

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 42.7 bits (100), Expect = 8e-05
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  + ++H   IVHRDIK  N L   R++   V L DFG +      C      R +T
Sbjct: 114 QILEGMSYLHSNMIVHRDIKGANIL---RDSAGNVKLGDFGASKRLQTICMSGTGIRSVT 170

Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
           GT  + S           + D+ +L  T+V  L  K PW
Sbjct: 171 GTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (101), Expect = 8e-05
 Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 8/87 (9%)

Query: 55  DLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           +LF +  K  RFS         +++  LEH+H+  IV+RD+KP+N L+    +   + L 
Sbjct: 82  ELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGH---IALC 138

Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTARY 139
           DFGL+     N      T    GT  Y
Sbjct: 139 DFGLSK---ANLTDNKTTNTFCGTTEY 162

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 42.9 bits (101), Expect = 9e-05
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 41  YNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           Y  L+ME L  G  +  L +Y    FS         + +  +E VH+   +HRDIKPDN 
Sbjct: 75  YLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNI 132

Query: 99  LMGVRENFNTVYLVDFGLAVDF 120
           L+    +   + L DFGL+  F
Sbjct: 133 LIDRGGH---IKLSDFGLSTGF 151

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 8/90 (8%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+     +L Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 103 LVMELMDA---NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 156

Query: 104 ENFNTVYLVDFGLAVDFCPN--CPPRIRTR 131
           ++  T+ ++DFGLA   C N    P + TR
Sbjct: 157 KSDCTLKILDFGLARTACTNFMMTPYVVTR 186

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 4/75 (5%)

Query: 44  LVMELLGP-SLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           L+ME L   SL D  Q    + +LK +L+ + Q+   ++++  ++ +HRD+   N L+  
Sbjct: 85  LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV-- 142

Query: 103 RENFNTVYLVDFGLA 117
            E+ + V + DFGLA
Sbjct: 143 -ESEDLVKISDFGLA 156

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 15/102 (14%)

Query: 30  PHVM---GYGTSGDYNILVMEL---------LGPSLEDLFQYCSKRFSLKTVLMLADQMI 77
           P+V+   G  T  +   LV+E          L  S            SLK +L  A Q+ 
Sbjct: 56  PNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIA 115

Query: 78  SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
             +E++  KK VHRD+   N L+G  E+   V + DFGL+ D
Sbjct: 116 KGMEYLASKKFVHRDLAARNCLVG--ED-LVVKISDFGLSRD 154

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 42  NILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           ++L+M+ +    L DL +    + S   V  +  Q++  L  +H+  I+H DIK +N L 
Sbjct: 84  HVLIMDYIKDGDLFDLLKK-EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY 142

Query: 101 GVRENFNTVYLVDFGL 116
                 + +YL D+GL
Sbjct: 143 --DRAKDRIYLCDYGL 156

Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 80  LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           L ++H  K++HRDIK  N L+   +N   V LVDFG++
Sbjct: 126 LAYLHENKVIHRDIKGQNILL--TKNAE-VKLVDFGVS 160

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 9/68 (13%)

Query: 55  DLFQYCSKR----FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN-FLMGVRENFNTV 109
           DL++  + +    F    +L    Q+   L+HVH +KI+HRDIK  N FL        T+
Sbjct: 85  DLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT----KDGTI 140

Query: 110 YLVDFGLA 117
            L DFG+A
Sbjct: 141 KLGDFGIA 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 16/126 (12%)

Query: 3   VEPVRNPVQRLFWERNFYEKLHGAPGVPH--VMGY------GTSG-DYN--ILVMELLGP 51
           V+ +  P Q L   R  Y +L     + H  V+G        TS  ++N   LV  L+G 
Sbjct: 45  VKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGA 104

Query: 52  SLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYL 111
            L ++ +   ++ S + V  L  Q++  L+++H   I+HRD+KP N  + V E+   + +
Sbjct: 105 DLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSN--VAVNEDCE-LRI 159

Query: 112 VDFGLA 117
           +DFGLA
Sbjct: 160 LDFGLA 165

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 6/76 (7%)

Query: 44  LVMELLGP--SLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVME L P  SL D  Q   +R   + +L+ A Q+   +E++  K+ VHRD+   N L+ 
Sbjct: 84  LVMEYL-PYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV- 141

Query: 102 VRENFNTVYLVDFGLA 117
             E+ N V + DFGL 
Sbjct: 142 --ESENRVKIGDFGLT 155

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 46/162 (28%)

Query: 88  IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF----------CPN--CPPRIRTRGLTG 135
           I+HRD+KP N L+        V L DFG++ +           C +   P RI++ G   
Sbjct: 124 IIHRDVKPTNVLVNGN---GQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQ 180

Query: 136 TARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTM 195
              Y +V +  W          +L  +++    G+ P+      N   ++          
Sbjct: 181 NPTY-TVQSDVW----------SLGLSILEMALGRYPYPPETYANIFAQLS--------- 220

Query: 196 TPEAICEGTPP--------EFAEFLRYCRGLAFSEEPNYGKL 229
              AI +G PP        +  +F+  C     +  P Y +L
Sbjct: 221 ---AIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQL 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 10/76 (13%)

Query: 44  LVMELLGPSLEDLFQYC--SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVMEL+  +L  + Q     +R S      L  QM+  ++H+H   I+HRD+KP N +  
Sbjct: 98  LVMELMDANLCQVIQMDLDHERMSY-----LLYQMLCGIKHLHSAGIIHRDLKPSNIV-- 150

Query: 102 VRENFNTVYLVDFGLA 117
           V+ +  T+ ++DFGLA
Sbjct: 151 VKSDC-TLKILDFGLA 165

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 21/154 (13%)

Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           DLF   SK   F+ + V     ++   L+H+H   I++RD+KP+N L+   +    + L 
Sbjct: 84  DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLT 140

Query: 113 DFGL---AVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG 169
           DFGL   ++D         +     GT  Y +         +   D  +    +   L G
Sbjct: 141 DFGLSKESID------HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Query: 170 KLPWQSIKSDNEETRMQRVTEMKLTM----TPEA 199
            LP+Q    D +ET M  + + KL M    +PEA
Sbjct: 195 SLPFQG--KDRKET-MTMILKAKLGMPQFLSPEA 225

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 55  DLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYL 111
           DL QY  +         V +   Q++  L ++H + I+HRD+KP N L+        + L
Sbjct: 88  DLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKL 144

Query: 112 VDFGLA 117
            DFGLA
Sbjct: 145 ADFGLA 150

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 44  LVMELLGPSLEDLFQYCSK-RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           L+ME +   L  L  Y  K + +L  +L+ A Q+   + ++H +  +HRD+   N L+  
Sbjct: 85  LIMEYV--PLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL-- 140

Query: 103 RENFNTVYLVDFGLA 117
            +N   V + DFGLA
Sbjct: 141 -DNDRLVKIGDFGLA 154

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 9/99 (9%)

Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L  +H + ++HRDIK D+
Sbjct: 88  GDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDS 145

Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGT 136
            L+    +   V L DFG         P R   + L GT
Sbjct: 146 ILL---TSDGRVKLSDFGFCAQVSKEVPRR---KSLVGT 178

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 36/127 (28%)

Query: 7   RNPVQRLFWERN----------------FYEKLHGAPGVPHVMGYGTSGDYNILVMELLG 50
           RN +Q++F ER+                F  K H    +  VM Y   GD   L ++ +G
Sbjct: 42  RNQIQQVFVERDILTFAENPFVVSMFCSFETKRH----LCMVMEYVEGGDCATL-LKNIG 96

Query: 51  PSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVY 110
               D+    ++ +  +TVL L        E++H   IVHRD+KPDN L+    +   + 
Sbjct: 97  ALPVDM----ARMYFAETVLAL--------EYLHNYGIVHRDLKPDNLLI---TSMGHIK 141

Query: 111 LVDFGLA 117
           L DFGL+
Sbjct: 142 LTDFGLS 148

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 7/76 (9%)

Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           F  +  +  A ++   LE + R++IV+RD+KP+N L+  R +   + + D GLAV     
Sbjct: 99  FDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGH---IRISDLGLAVQI--- 152

Query: 124 CPPRIRTRGLTGTARY 139
            P     RG  GT  Y
Sbjct: 153 -PEGETVRGRVGTVGY 167

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 9/130 (6%)

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S RF        A +++  L+ +H + I++RD+K DN L+   E    + + DFG+  + 
Sbjct: 90  SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD-SEGH--IKIADFGMCKE- 145

Query: 121 CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDN 180
                  + T    GT  Y +     +    P  D  AL   L   L G+ P++    D+
Sbjct: 146 --GILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFE---GDD 200

Query: 181 EETRMQRVTE 190
           E+   Q + E
Sbjct: 201 EDELFQSILE 210

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 44  LVMELLGPS-LEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM-- 100
           LV E +  + L+DL +Y +       V     Q++  +E  H   I+HRDIKP+N L+  
Sbjct: 77  LVFEFVDHTVLDDLEKYPNG-LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ 135

Query: 101 -GVRENFNTVYLVDFGLA 117
            GV      V L DFG A
Sbjct: 136 SGV------VKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 9/92 (9%)

Query: 30  PHVMGYGTS--GDYNI-LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P++  Y  S      + ++ME   G S  DL +    +     +  +  +++  LE++H 
Sbjct: 59  PYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHE 116

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +  +HRDIK  N L+        V L DFG++
Sbjct: 117 EGKIHRDIKAANILL---SEEGDVKLADFGVS 145

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 38  SGDYNILVMELLGPSLEDLFQYCSK-RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
            GD+  LVM+++   L+ +     K R +   V  +  Q+++ L  +H+   +HRD+ P 
Sbjct: 91  EGDFINLVMDIMASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPA 148

Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRT 130
           N  +    +     + DFGLA  +    PP   T
Sbjct: 149 NIFI---NSKGICKIADFGLARRY--GYPPYSDT 177

Length = 335

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 16/77 (20%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-- 132
           Q++  +   H ++++HRD+KP N L+   +N   + L DFGLA  F    P R+ T    
Sbjct: 109 QILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAF--GIPVRVYTHEVV 163

Query: 133 ---------LTGTARYA 140
                    L G+ RY+
Sbjct: 164 TLWYRAPEVLLGSPRYS 180

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 48/227 (21%), Positives = 81/227 (35%), Gaps = 59/227 (25%)

Query: 32  VMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR 91
           VM Y   GD   L+        ED+ Q+            LA +++  +  VH+   VHR
Sbjct: 79  VMEYQPGGDLLSLLNRYEDQFDEDMAQF-----------YLA-ELVLAIHSVHQMGYVHR 126

Query: 92  DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS 151
           DIKP+N L+   +    + L DFG A     N    + ++   GT  Y +      ++  
Sbjct: 127 DIKPENVLI---DRTGHIKLADFGSAARLTAN--KMVNSKLPVGTPDYIAPEVLTTMNGD 181

Query: 152 PRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPE---- 207
            +      C            W S+                  +  E I   +P      
Sbjct: 182 GKGTYGVEC-----------DWWSLG----------------VIAYEMIYGRSPFHEGTS 214

Query: 208 ---FAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN-----KERCEFD 246
              +   + + R L F E+P   K+   F +L+++     KER  ++
Sbjct: 215 AKTYNNIMNFQRFLKFPEDP---KVSSDFLDLIQSLLCGQKERLGYE 258

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 16/107 (14%)

Query: 16  ERNFYEKLHGAPG-VPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLA 73
           E    + L      VP V+  G S  ++ L+ME + G +L+++        S +    +A
Sbjct: 41  EVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV--------SEEEKEDIA 92

Query: 74  DQMISRLEHVHRKKI---VHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +Q+   L  +H+  +    H D+ P N L  V +    + ++D+  A
Sbjct: 93  EQLAELLAKLHQLPLLVLCHGDLHPGNIL--VDDG-KILGIIDWEYA 136

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           Q++  + + H  +++HRD+KP N L+        + L DFGLA  F
Sbjct: 107 QLLQGIAYCHSHRVLHRDLKPQNLLIDRE---GALKLADFGLARAF 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 15/82 (18%)

Query: 30  PHVMGYGTSG-DYNIL--VMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISR------- 79
           P+++ Y  +  D N L  VME       DL +  SKR   +   ++ +Q I R       
Sbjct: 59  PNIISYKEAFLDGNKLCIVMEY--APFGDLSKAISKRKKKRK--LIPEQEIWRIFIQLLR 114

Query: 80  -LEHVHRKKIVHRDIKPDNFLM 100
            L+ +H +KI+HRD+K  N L+
Sbjct: 115 GLQALHEQKILHRDLKSANILL 136

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E +   L  L +     FS   +     Q++  L + H+K  +HRDIK  N L+   
Sbjct: 93  LVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL--- 149

Query: 104 ENFNTVYLVDFGLA 117
            N   + L DFGLA
Sbjct: 150 NNKGQIKLADFGLA 163

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGL 116
           LML  Q++  L   H + IVHRD+KP N ++          ++DFG+
Sbjct: 84  LML--QVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGI 128

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
           +M+  ++ VH+   VHRDIKPDN L+    +   + L DFG
Sbjct: 110 EMVLAIDSVHQLGYVHRDIKPDNVLLDKNGH---IRLADFG 147

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 46  MELLGPSLEDLFQ--YCSKRFSLKTVLM--LADQMISRLEHVHRK-KIVHRDIKPDNFLM 100
           MEL+  SL+  ++  Y   +  +   ++  +A   +  L ++  + KI+HRD+KP N L+
Sbjct: 82  MELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL 141

Query: 101 GVRENFNTVYLVDFGLA 117
               N   + L DFG++
Sbjct: 142 DRNGN---IKLCDFGIS 155

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 25/199 (12%)

Query: 44  LVMELLG--PSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           ++ME LG   +L+ L       F + T+L    +++  L+++H +K +HRDIK  N L+ 
Sbjct: 79  IIMEYLGGGSALDLLRAGPFDEFQIATML---KEILKGLDYLHSEKKIHRDIKAANVLLS 135

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY 161
            +     V L DFG+A         +I+     GT  + +    Q      + D+ +L  
Sbjct: 136 EQ---GDVKLADFGVAGQLTDT---QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGI 189

Query: 162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFS 221
           T +   +G+ P       N +    RV  +     P  +       F EF+  C     +
Sbjct: 190 TAIELAKGEPP-------NSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDAC----LN 238

Query: 222 EEPNYGKLRDSFRNLLENK 240
           ++P++   R + + LL++K
Sbjct: 239 KDPSF---RPTAKELLKHK 254

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 6/74 (8%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N ++   
Sbjct: 99  LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--- 152

Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 153 KSDCTLKILDFGLA 166

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 13/119 (10%)

Query: 30  PHVMGYGTS----GDYNILVMELLGPSLEDLFQYCSKRFSL---KTVLMLADQMISRLEH 82
           P+V+ Y  S     + NI++       L  + ++  K+  L   KTV     Q+ S LEH
Sbjct: 62  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121

Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +H ++++HRDIKP N  +        V L D GL   F            L GT  Y S
Sbjct: 122 MHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTA---AHSLVGTPYYMS 174

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 40.9 bits (96), Expect = 4e-04
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +M   ++ +H    +HRD+KP+NFL+    +   + L DFGL+
Sbjct: 109 EMFEAVDALHELGYIHRDLKPENFLIDASGH---IKLTDFGLS 148

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 15/74 (20%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +++EL     E   +Y  +            QM+  L  +H  K++HRD+K  N L+ + 
Sbjct: 92  IMLELERGLTEPQIRYVCR------------QMLEALNFLHSHKVIHRDLKAGNILLTLD 139

Query: 104 ENFNTVYLVDFGLA 117
                V L DFG++
Sbjct: 140 ---GDVKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 40.5 bits (94), Expect = 4e-04
 Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 7/77 (9%)

Query: 44  LVMELLGP-SLEDLFQYCSKRFSLKT--VLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           LVME  G  S+ DL +  +K  +LK   +  +  +++  L H+H+ K++HRDIK  N L+
Sbjct: 86  LVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 144

Query: 101 GVRENFNTVYLVDFGLA 117
              EN   V LVDFG++
Sbjct: 145 --TEN-AEVKLVDFGVS 158

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 3/63 (4%)

Query: 55  DLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDF 114
           DL +      S   V  L  QM+  L+++H   I+HRD+KP N  + V E+   + ++DF
Sbjct: 105 DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGN--LAVNEDCE-LKILDF 161

Query: 115 GLA 117
           GLA
Sbjct: 162 GLA 164

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 16/106 (15%)

Query: 15  WERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD 74
           W    Y        +  VM Y   GD   L++ + G   EDL ++               
Sbjct: 62  WVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARF------------YIA 108

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           ++   +E VH+   +HRDIKPDN L+   +    + L DFGL   F
Sbjct: 109 ELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGF 151

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 44  LVMELLGPSLEDLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           +VME +  ++    ++ ++      L  V + + Q+   L ++H K I HRD+KP N L 
Sbjct: 144 VVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLL- 202

Query: 101 GVRENFNTVYLVDFGLA 117
            +  N +T+ L DFG A
Sbjct: 203 -IDPNTHTLKLCDFGSA 218

Length = 440

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 40.4 bits (94), Expect = 6e-04
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N ++   
Sbjct: 106 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--- 159

Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 40.0 bits (93), Expect = 6e-04
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 13/119 (10%)

Query: 30  PHVMGYGTS----GDYNILVMELLGPSLEDLFQYCSKRFSL---KTVLMLADQMISRLEH 82
           P+V+ Y  S     + NI++       L  + +Y  K+  L   +TV     Q+ S +EH
Sbjct: 62  PNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEH 121

Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +H ++++HRDIKP N  +        V L D GL   F            L GT  Y S
Sbjct: 122 MHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTA---AHSLVGTPYYMS 174

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VM+L+   L  +  +  +  + + +     Q++  L+++H   ++HRD+KP N L  V 
Sbjct: 85  VVMDLMESDLHHII-HSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLL--VN 141

Query: 104 ENFNTVYLVDFGLA 117
           E+   + + DFG+A
Sbjct: 142 ED-CELRIGDFGMA 154

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 8/93 (8%)

Query: 30  PHVMGYGTS--GDYNI-LVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ +  S   D ++ +VME    G  ++ +     K F   T+L    QM   ++H+H
Sbjct: 58  PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH 117

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
            K+++HRDIK  N  +   +N   V L DFG A
Sbjct: 118 EKRVLHRDIKSKNIFL--TQNGK-VKLGDFGSA 147

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 40.0 bits (93), Expect = 8e-04
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 99  LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 154

Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 155 EDCE-LKILDFGLA 167

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 43  ILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           I+VME + G  L+DL    S       +     +++ +L   H   I+H D+   N ++ 
Sbjct: 75  IIVMEYIEGEPLKDLIN--SNGMEELELSREIGRLVGKL---HSAGIIHGDLTTSNMILS 129

Query: 102 VRENFNTVYLVDFGLA 117
             +    +YL+DFGLA
Sbjct: 130 GGK----IYLIDFGLA 141

Length = 211

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 44  LVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +V EL  LG  L+ L +     F + T+   A Q+ + + ++  K+ +HRD+   N L+ 
Sbjct: 72  MVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA 131

Query: 102 VRENFNTVYLVDFGL 116
                + V + DFGL
Sbjct: 132 SD---DKVKIGDFGL 143

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 39.6 bits (92), Expect = 9e-04
 Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 7/77 (9%)

Query: 44  LVMELLGP-SLEDLFQYCSKRFSLKT--VLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           LVME  G  S+ DL +  +K  +LK   +  +  +++  L H+H  K++HRDIK  N L+
Sbjct: 96  LVMEFCGAGSVTDLVKN-TKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL 154

Query: 101 GVRENFNTVYLVDFGLA 117
              EN   V LVDFG++
Sbjct: 155 --TEN-AEVKLVDFGVS 168

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 39.6 bits (92), Expect = 9e-04
 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L ++H + ++HRDIK D+
Sbjct: 91  GDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 148

Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   + L DFG         P R   + L GT  + +      L      D+ 
Sbjct: 149 ILL---TSDGRIKLSDFGFCAQVSKEVPKR---KSLVGTPYWMAPEVISRLPYGTEVDIW 202

Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 203 SLGIMVIEMIDGEPPY 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 39.6 bits (92), Expect = 9e-04
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 20/151 (13%)

Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +   +    + +  ++  +I  L ++  
Sbjct: 63  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLRE 121

Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLA---VDFCPNCPPRIRTRGLTGTARYAS 141
           K KI+HRD+KP N L+  R     + L DFG++   +D   N           GT  Y S
Sbjct: 122 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMAN--------SFVGTRSYMS 170

Query: 142 VNAHQWLDQSPRDDLEALCYTLVYFLRGKLP 172
               Q    S + D+ ++  +LV    G+ P
Sbjct: 171 PERLQGTHYSVQSDIWSMGLSLVEMAIGRYP 201

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 19/131 (14%)

Query: 27  PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQ--MISRLEHVH 84
           P +  + G  T   YN     +L     DL+ Y + + ++    +LA +  ++  ++++H
Sbjct: 143 PSIIQLKGTFT---YNKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLH 199

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA---VDFCPNCPPRIRTRGLTGTARYAS 141
             +I+HRDIK +N  +    +   V L DFG A   VD   N     +  G  GT    +
Sbjct: 200 ENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFPVDINAN-----KYYGWAGT---IA 248

Query: 142 VNAHQWLDQSP 152
            NA + L + P
Sbjct: 249 TNAPELLARDP 259

Length = 391

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 39.7 bits (92), Expect = 0.001
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 6/66 (9%)

Query: 55  DLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYL 111
           DL QY  K       + V +   Q++  L ++H++ I+HRD+KP N L+    +   + L
Sbjct: 88  DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKL 144

Query: 112 VDFGLA 117
            DFGLA
Sbjct: 145 ADFGLA 150

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 16/89 (17%)

Query: 32  VMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR 91
           VM Y   GD   L++ L G   EDL      RF +   L  A      +E VH+   +HR
Sbjct: 79  VMDYIPGGDMMSLLIRL-GIFEEDL-----ARFYIAE-LTCA------IESVHKMGFIHR 125

Query: 92  DIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           DIKPDN L+   +    + L DFGL   F
Sbjct: 126 DIKPDNILI---DRDGHIKLTDFGLCTGF 151

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 17/37 (45%), Positives = 27/37 (72%), Gaps = 3/37 (8%)

Query: 80  LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGL 116
           LEH+H++ I++RD+KP+N L+  + +   V L DFGL
Sbjct: 113 LEHLHQQGIIYRDLKPENILLDAQGH---VKLTDFGL 146

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L  +H + ++HRDIK D+
Sbjct: 89  GDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDS 146

Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   V L DFG         P   R + L GT  + +      L   P  D+ 
Sbjct: 147 ILL---THDGRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMAPELISRLPYGPEVDIW 200

Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 201 SLGIMVIEMVDGEPPY 216

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 35  YGTSGDYNILVMELLGPSLEDLFQYCSKR----FSLKTVLMLADQMISRLEHVHRKKIVH 90
           Y    D N L++E+   +   L+    ++    F  + VL    Q++S + ++H+  I+H
Sbjct: 65  YNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILH 124

Query: 91  RDIKPDNFLMGVRENFNTVYLVDFGLA 117
           RDIK  N  +  +     + L DFG++
Sbjct: 125 RDIKTLNIFL-TKAGL--IKLGDFGIS 148

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 3/104 (2%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  + ++H   IVHRDIK  N L   R++   V L DFG +      C      + +T
Sbjct: 114 QILEGVSYLHSNMIVHRDIKGANIL---RDSVGNVKLGDFGASKRLQTICLSGTGMKSVT 170

Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKS 178
           GT  + S           + D+ ++  T+V  L  K PW   ++
Sbjct: 171 GTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA 214

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 16/106 (15%)

Query: 15  WERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD 74
           W    Y        +  VM Y   GD   L++ +      ++F     RF +   L LA 
Sbjct: 62  WVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM------EVFPEVLARFYIAE-LTLA- 113

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
                +E VH+   +HRDIKPDN L+ +  +   + L DFGL   F
Sbjct: 114 -----IESVHKMGFIHRDIKPDNILIDLDGH---IKLTDFGLCTGF 151

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.9 bits (90), Expect = 0.001
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  + ++H   IVHRDIK  N L   R++   V L DFG +      C      + +T
Sbjct: 114 QILQGVSYLHSNMIVHRDIKGANIL---RDSAGNVKLGDFGASKRIQTICMSGTGIKSVT 170

Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
           GT  + S           + D+ ++  T+V  L  K PW
Sbjct: 171 GTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPW 209

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 22/147 (14%)

Query: 32  VMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR 91
           VM Y   GD   L+ +      ED+      RF L        +M+  ++ VH+   VHR
Sbjct: 79  VMDYYVGGDLLTLLSKFEDRLPEDM-----ARFYLA-------EMVIAIDSVHQLHYVHR 126

Query: 92  DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ- 150
           DIKPDN LM +  +   + L DFG  +    +    +++    GT  Y S    Q ++  
Sbjct: 127 DIKPDNILMDMNGH---IRLADFGSCLKLMED--GTVQSSVAVGTPDYISPEILQAMEDG 181

Query: 151 ----SPRDDLEALCYTLVYFLRGKLPW 173
                P  D  +L   +   L G+ P+
Sbjct: 182 KGKYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 38  SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           + ++   VME L G  L    Q    RF        A ++I  L+ +H+K I++RD+K D
Sbjct: 67  TKEHLFFVMEYLNGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLD 125

Query: 97  NFLMGVRENFNTVYLVDFGLA 117
           N L+   +    + + DFG+ 
Sbjct: 126 NVLL---DKDGHIKIADFGMC 143

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 38.8 bits (90), Expect = 0.001
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 44  LVMELL-GPSLE-DLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVM L+ G  L+  ++    +   ++ V+  + Q+   + H+H   IV+RD+KP+N L+ 
Sbjct: 70  LVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL- 128

Query: 102 VRENFNTVYLVDFGLAVD 119
             ++     L D GLAV+
Sbjct: 129 --DDQGNCRLSDLGLAVE 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)

Query: 44  LVMELLGPSLEDLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           +VMEL    L +L  Y         L ++++ + Q+ + L ++  K+ VHRDI   N L+
Sbjct: 83  IVMELA--PLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV 140

Query: 101 GVRENFNTVYLVDFGLA 117
              +    V L DFGL+
Sbjct: 141 SSPD---CVKLGDFGLS 154

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 3/37 (8%)

Query: 80  LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGL 116
           ++ +H+   +HRDIKPDN L+  + +   + L DFGL
Sbjct: 114 IDSIHKLGYIHRDIKPDNLLLDAKGH---IKLSDFGL 147

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 15/101 (14%)

Query: 73  ADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG 132
           A ++ S L ++H   IV+RD+KP+N L+   ++   + L DFGL  +   N      T  
Sbjct: 102 AAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKE---NIEHNGTTST 155

Query: 133 LTGTARYASVNAHQWLDQSPRDD------LEALCYTLVYFL 167
             GT  Y    A + L + P D       L A+ Y ++Y L
Sbjct: 156 FCGTPEYL---APEVLHKQPYDRTVDWWCLGAVLYEMLYGL 193

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 5/44 (11%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV-DFGLA 117
           Q++  L+++H   I+HRDIKP N L+    N N V  + DFGLA
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGNLLV----NSNCVLKICDFGLA 150

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)

Query: 55  DLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           +LF +  +  RF L        +++  LE++H+  +++RD+KP+N L+  + +   + L 
Sbjct: 79  ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGH---IALC 135

Query: 113 DFGLAVDFCP-NCPPRIRTRGLTGTARY 139
           DFGL    C  N     +T    GT  Y
Sbjct: 136 DFGL----CKLNMKDDDKTNTFCGTPEY 159

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           QM+  L+++H  KI+HRD+K  N L+ +  +   + L DFG++
Sbjct: 118 QMLEALQYLHSMKIIHRDLKAGNVLLTLDGD---IKLADFGVS 157

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 18/129 (13%)

Query: 80  LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT--GTA 137
           L +VHR  I+HRDIKP N L+  R     + L DFG++ +        I +   T  GT+
Sbjct: 119 LYNVHR--IMHRDIKPSNILVNSR---GQIKLCDFGVSGEL-------INSIADTFVGTS 166

Query: 138 RYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP 197
            Y S    Q    + + D+ +L  +++    GK P+    + +      +   M +    
Sbjct: 167 TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF----AFSNIDDDGQDDPMGILDLL 222

Query: 198 EAICEGTPP 206
           + I +  PP
Sbjct: 223 QQIVQEPPP 231

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 32  VMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR 91
           VM Y   GD   L+ +      ED+      RF +        +M+  +  +H+   VHR
Sbjct: 79  VMDYYVGGDLLTLLSKFEDRLPEDM-----ARFYIA-------EMVLAIHSIHQLHYVHR 126

Query: 92  DIKPDNFLMGVRENFNTVYLVDFG 115
           DIKPDN L+ +  +   + L DFG
Sbjct: 127 DIKPDNVLLDMNGH---IRLADFG 147

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 9/94 (9%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           ++ME L G +L D+      R + + +  + + ++  L ++H + ++HRDIK D+ L+ +
Sbjct: 95  VLMEFLQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL 152

Query: 103 RENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGT 136
                 V L DFG       + P R   + L GT
Sbjct: 153 D---GRVKLSDFGFCAQISKDVPKR---KSLVGT 180

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 15/75 (20%)

Query: 56  LFQYCS-----KRFSLKT-VLMLADQMIS-------RLEHVHRKKIVHRDIKPDNFLMGV 102
           + +YC      KR + +  VL   DQ++S        L+H+H +KI+HRDIK  N  +  
Sbjct: 77  VMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS- 135

Query: 103 RENFNTVYLVDFGLA 117
            +N     L DFG+A
Sbjct: 136 -KNGMVAKLGDFGIA 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 20/151 (13%)

Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +  +KR   + +  ++  ++  L ++  
Sbjct: 63  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLRE 121

Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLA---VDFCPNCPPRIRTRGLTGTARYAS 141
           K +I+HRD+KP N L+  R     + L DFG++   +D   N           GT  Y S
Sbjct: 122 KHQIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMAN--------SFVGTRSYMS 170

Query: 142 VNAHQWLDQSPRDDLEALCYTLVYFLRGKLP 172
               Q    S + D+ ++  +LV    G+ P
Sbjct: 171 PERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           Q+I  +   H+  IVHRDIKP+N L+   +    + L DFG A
Sbjct: 108 QLIKAIHWCHKNDIVHRDIKPENLLISHND---VLKLCDFGFA 147

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 9/65 (13%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++   E++H K I++RD+KP+N L+  + +   V + DFG A           RT  L 
Sbjct: 126 ELVLAFEYLHSKDIIYRDLKPENLLLDNKGH---VKVTDFGFAKKV------PDRTFTLC 176

Query: 135 GTARY 139
           GT  Y
Sbjct: 177 GTPEY 181

Length = 329

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVME    S  D+ +   K      +  +    +  L ++H  + +HRDIK  N L+   
Sbjct: 92  LVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL--- 148

Query: 104 ENFNTVYLVDFGLAVDFCP 122
               TV L DFG A    P
Sbjct: 149 TEPGTVKLADFGSASLVSP 167

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	257
KOG0581|consensus	364		100.0
KOG0575|consensus	592		100.0
KOG0592|consensus	604		100.0
KOG0615|consensus	475		100.0
KOG0197|consensus	468		100.0
KOG0192|consensus	362		100.0
KOG0598|consensus	357		100.0
KOG0591|consensus	375		100.0
KOG0595|consensus	429		100.0
KOG0198|consensus	313		100.0
KOG0583|consensus	370		100.0
KOG0661|consensus	538		100.0
KOG0578|consensus	550		100.0
KOG0582|consensus	516		100.0
KOG0616|consensus	355		100.0
KOG0588|consensus	786		100.0
KOG0593|consensus	396		100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0597|consensus	808		100.0
KOG0033|consensus	355		100.0
KOG0599|consensus	411		100.0
KOG1026|consensus	774		100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0694|consensus	694		100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0659|consensus	318		100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG4721|consensus	904		100.0
KOG0600|consensus	560		100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0605|consensus	550		100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0660|consensus	359		100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0589|consensus	426		100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
KOG0193|consensus	678		100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
KOG0610|consensus	459		100.0
KOG0596|consensus	677		100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
KOG4717|consensus	864		100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0032|consensus	382		100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
KOG0611|consensus	668		100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
KOG0604|consensus	400		100.0
KOG1095|consensus	1025		100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
KOG0580|consensus	281		100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
KOG0201|consensus	467		100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0585|consensus	576		100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG0194|consensus	474		100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
KOG0584|consensus	632		100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
KOG1989|consensus	738		100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
KOG4278|consensus	1157		100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG0607|consensus	463		100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
KOG0663|consensus	419		100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
KOG0658|consensus	364		100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
KOG0577|consensus	948		100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
KOG4257|consensus	974		100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
KOG0983|consensus	391		100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG0196|consensus	996		100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG0574|consensus	502		100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
KOG0667|consensus	586		100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
KOG0594|consensus	323		100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
KOG1187|consensus	361		100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
KOG1094|consensus	807		100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
KOG4645|consensus	1509		100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
KOG0199|consensus	1039		100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG2345|consensus	302		100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
KOG4279|consensus	1226		100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0579|consensus	1187		100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
KOG0603|consensus	612		100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
KOG1163|consensus	341		100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0200|consensus	609		100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
KOG0586|consensus	596		100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG1165|consensus	449		100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
KOG0986|consensus	591		100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
KOG0612|consensus	1317		100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
KOG0690|consensus	516		100.0
KOG0696|consensus	683		100.0
KOG0614|consensus	732		100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG0671|consensus	415		100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
KOG2052|consensus	513		100.0
KOG0669|consensus	376		100.0
KOG0695|consensus	593		100.0
KOG4236|consensus	888		100.0
KOG1024|consensus	563		100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG4250|consensus	732		99.98
KOG1027|consensus	903		99.98
KOG1025|consensus	1177		99.98
KOG0587|consensus	953		99.98
KOG0666|consensus	438		99.98
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.98
KOG0662|consensus	292		99.97
KOG1006|consensus	361		99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
KOG0608|consensus	1034		99.97
KOG3653|consensus	534		99.97
KOG1164|consensus	322		99.97
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.97
KOG0670|consensus	752		99.97
KOG0665|consensus	369		99.97
KOG0984|consensus	282		99.97
KOG1035|consensus	1351		99.96
PLN00181	793	protein SPA1-RELATED; Provisional	99.96
KOG1151|consensus	775		99.96
KOG0668|consensus	338		99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.96
KOG1152|consensus	772		99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
KOG0664|consensus	449		99.95
KOG1345|consensus	378		99.95
KOG1290|consensus	590		99.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.94
KOG1167|consensus	418		99.94
KOG0576|consensus	829		99.94
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.93
KOG0590|consensus	601		99.92
KOG0195|consensus	448		99.9
KOG4158|consensus	598		99.88
KOG1023|consensus	484		99.88
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.86
KOG0603|consensus	612		99.83
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.82
KOG1240|consensus	1431		99.82
KOG1033|consensus	516		99.78
PRK12274	218	serine/threonine protein kinase; Provisional	99.77
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.76
PRK09188	365	serine/threonine protein kinase; Provisional	99.75
PRK10345	210	hypothetical protein; Provisional	99.69
KOG0606|consensus	1205		99.69
KOG1166|consensus	974		99.67
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.66
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.63
KOG0590|consensus	601		99.6
KOG1266|consensus	458		99.55
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.54
PRK14879	211	serine/threonine protein kinase; Provisional	99.53
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.53
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.5
smart00090	237	RIO RIO-like kinase.	99.47
KOG0601|consensus	524		99.44
KOG1243|consensus	690		99.44
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.4
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.37
COG4248	637	Uncharacterized protein with protein kinase and he	99.29
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.27
KOG3087|consensus	229		99.24
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.21
KOG0606|consensus	1205		99.19
KOG2137|consensus	700		99.15
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.15
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.14
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.04
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.02
KOG0601|consensus	524		99.02
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.01
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.99
KOG3741|consensus	655		98.93
PRK09902	216	hypothetical protein; Provisional	98.84
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.72
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.65
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.4
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.39
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.33
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.24
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.2
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.19
KOG1035|consensus	1351		98.13
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.88
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.87
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.82
KOG1235|consensus	538		97.78
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.68
PF01636	239	APH: Phosphotransferase enzyme family This family	97.58
KOG0576|consensus	829		97.58
PLN02876	822	acyl-CoA dehydrogenase	97.58
KOG2268|consensus	465		97.57
KOG1093|consensus	725		97.54
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.0
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.0
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.75
KOG1826|consensus	2724		96.5
KOG2270|consensus	520		96.13
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.13
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	95.44
PRK09550	401	mtnK methylthioribose kinase; Reviewed	95.42
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.41
PRK10593	297	hypothetical protein; Provisional	95.39
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.93
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.91
PLN02756	418	S-methyl-5-thioribose kinase	94.76
PTZ00384	383	choline kinase; Provisional	94.69
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	94.66
PRK05231	319	homoserine kinase; Provisional	94.58
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	94.53
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	94.24
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	93.48
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.35
PRK10271	188	thiK thiamine kinase; Provisional	93.19
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	92.53
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	92.27
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	92.11
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	91.05
PLN02236	344	choline kinase	90.97
COG2334	331	Putative homoserine kinase type II (protein kinase	90.42
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	89.74
PHA03111	444	Ser/Thr kinase; Provisional	89.57
KOG4720|consensus	391		89.46

>KOG0581|consensus

Probab=100.00  E-value=5.7e-48  Score=302.87  Aligned_cols=218  Identities=23%  Similarity=0.342  Sum_probs=189.6

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCc-cEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDY-NILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~-~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ++.++++.+|+++++.++ ||+|+.+||.|.++.. ++++|||| +|||.+++.. .+++++....+++.+++.||.|||
T Consensus       118 ~~~~~Qi~rEl~il~~~~-spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~-~g~i~E~~L~~ia~~VL~GL~YLh  195 (364)
T KOG0581|consen  118 PALQKQILRELEILRSCQ-SPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR-VGRIPEPVLGKIARAVLRGLSYLH  195 (364)
T ss_pred             HHHHHHHHHHHHHHhhCC-CCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHh
Confidence            455778999999999996 9999999999999884 99999999 9999999985 478999999999999999999999


Q ss_pred             h-CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          85 R-KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        85 ~-~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      + ++|+||||||.|+|++..   |.+||||||.+..+.++     ...+++||..|||||.+.+..|+.++||||||+++
T Consensus       196 ~~~~IIHRDIKPsNlLvNsk---GeVKicDFGVS~~lvnS-----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsl  267 (364)
T KOG0581|consen  196 EERKIIHRDIKPSNLLVNSK---GEVKICDFGVSGILVNS-----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSL  267 (364)
T ss_pred             hccCeeeccCCHHHeeeccC---CCEEeccccccHHhhhh-----hcccccccccccChhhhcCCcCCcccceecccHHH
Confidence            5 999999999999999876   99999999998877655     22788999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCC--CCccHHHHHHHHHHHHhhCChhhhhcC-CcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         164 VYFLRGKLPWQSI--KSDNEETRMQRVTEMKLTMTPEAICEG-TPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       164 ~~l~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      +|+++|+.||...  ...+..+.+..|....    ++..+.+ +|++++++|..||.+||.+||+++++++  ++++...
T Consensus       268 lE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p----pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  268 LELAIGRFPYPPPNPPYLDIFELLCAIVDEP----PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             HHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC----CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence            9999999999874  2345666666666543    3444454 9999999999999999999999999976  4444433

>KOG0575|consensus

Probab=100.00  E-value=6.5e-47  Score=313.07  Aligned_cols=209  Identities=21%  Similarity=0.297  Sum_probs=192.3

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...++.+.+|+++.+.|+ ||||++++++|+++++.|+|.|+| .++|.++++ +.+.+++.+++.+++||+.||.|||+
T Consensus        59 ~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~  136 (592)
T KOG0575|consen   59 PKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHS  136 (592)
T ss_pred             cchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            456789999999999999 999999999999999999999999 999999999 67899999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      ++|+|||||..|++++.+   -+|||+|||++......   ..+..+..|||.|.|||++.....+..+||||+||++|-
T Consensus       137 ~~IiHRDLKLGNlfL~~~---~~VKIgDFGLAt~le~~---~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYt  210 (592)
T KOG0575|consen  137 LGIIHRDLKLGNLFLNEN---MNVKIGDFGLATQLEYD---GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYT  210 (592)
T ss_pred             cCceecccchhheeecCc---CcEEecccceeeeecCc---ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHh
Confidence            999999999999999876   78999999999887643   234477899999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+.|++||..   .+..+.+.+|....+.++     ..++.+..+||.++|+.||.+|||+++++.
T Consensus       211 LL~G~PPFet---k~vkety~~Ik~~~Y~~P-----~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  211 LLVGRPPFET---KTVKETYNKIKLNEYSMP-----SHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             hhhCCCCccc---chHHHHHHHHHhcCcccc-----cccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            9999999997   567778888888777766     689999999999999999999999999975

>KOG0592|consensus

Probab=100.00  E-value=4.4e-45  Score=298.29  Aligned_cols=227  Identities=24%  Similarity=0.348  Sum_probs=199.4

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ++...-+..|-++|.+|.+||+|++++-.|.+...+|+|+||+ +|.|.+++.. -+.|++..++.++.+|+.||.|||+
T Consensus       114 e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K-~Gsfde~caR~YAAeIldAleylH~  192 (604)
T KOG0592|consen  114 EKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKK-YGSFDETCARFYAAEILDALEYLHS  192 (604)
T ss_pred             hcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHH-hCcchHHHHHHHHHHHHHHHHHHHh
Confidence            3456678899999999988999999999999999999999999 9999999996 4679999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC--------CCC--ccCCCCcccccChhHhcCCCCCCcch
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP--------RIR--TRGLTGTARYASVNAHQWLDQSPRDD  155 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~--------~~~--~~~~~~~~~~~aPE~~~~~~~~~~~D  155 (257)
                      +||+||||||+|||++.|   +.++|+|||.+..+.+....        ...  ...++||..|++||++.....++.+|
T Consensus       193 ~GIIHRDlKPENILLd~d---mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sD  269 (604)
T KOG0592|consen  193 NGIIHRDLKPENILLDKD---GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSD  269 (604)
T ss_pred             cCceeccCChhheeEcCC---CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccc
Confidence            999999999999999887   99999999999877654311        111  14589999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         156 LEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       156 v~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      +|+|||++|+|+.|.+||.+   .+.....++|....+.++     +++|+.+.+||+++|..||.+|+++++|.     
T Consensus       270 iWAlGCilyQmlaG~PPFra---~NeyliFqkI~~l~y~fp-----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk-----  336 (604)
T KOG0592|consen  270 LWALGCILYQMLAGQPPFRA---ANEYLIFQKIQALDYEFP-----EGFPEDARDLIKKLLVRDPSDRLTSQQIK-----  336 (604)
T ss_pred             hHHHHHHHHHHhcCCCCCcc---ccHHHHHHHHHHhcccCC-----CCCCHHHHHHHHHHHccCccccccHHHHh-----
Confidence            99999999999999999998   466667777888777776     88999999999999999999999995543     


Q ss_pred             HHHhccccCCCCCcccccccc
Q psy2769         236 LLENKERCEFDLRYDWTLLER  256 (257)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~  256 (257)
                         .   ..|-+..||++|.+
T Consensus       337 ---~---HpFF~~Vdw~nlw~  351 (604)
T KOG0592|consen  337 ---A---HPFFEGVDWENLWQ  351 (604)
T ss_pred             ---h---CcccccCChhhhhh
Confidence               3   34888899988754

>KOG0615|consensus

Probab=100.00  E-value=1.6e-46  Score=297.69  Aligned_cols=211  Identities=20%  Similarity=0.274  Sum_probs=183.6

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      .+.+|+++|++|. ||+|++++++|+..+..|+||||+ ||.|.+.+- .++.+.++....+++|++.|+.|||+.||.|
T Consensus       222 ~v~~EieILkkL~-HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv-~nk~l~ed~~K~~f~Qll~avkYLH~~GI~H  299 (475)
T KOG0615|consen  222 DVQNEIEILKKLS-HPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVV-ANKYLREDLGKLLFKQLLTAVKYLHSQGIIH  299 (475)
T ss_pred             hhHHHHHHHHhcC-CCCEEEEeeeeecCCceEEEEEEecCccHHHHHH-hccccccchhHHHHHHHHHHHHHHHHcCccc
Confidence            4689999999999 999999999999999999999999 999999998 4788999999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC---CCcchHHHHHHHHHHHH
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ---SPRDDLEALCYTLVYFL  167 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~---~~~~Dv~slg~~l~~l~  167 (257)
                      |||||+|||+..+.....+||+|||++...+..    ....+..||+.|.|||++.+...   +.+.|+||+||++|-++
T Consensus       300 RDiKPeNILl~~~~e~~llKItDFGlAK~~g~~----sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcL  375 (475)
T KOG0615|consen  300 RDIKPENILLSNDAEDCLLKITDFGLAKVSGEG----SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCL  375 (475)
T ss_pred             ccCCcceEEeccCCcceEEEecccchhhccccc----eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEe
Confidence            999999999998766789999999999876532    23377899999999999987754   44789999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|.+||..-....  ...+.+.++++.+.++. +..++++..++|.+||..||++||+++++++
T Consensus       376 sG~pPFS~~~~~~--sl~eQI~~G~y~f~p~~-w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  376 SGYPPFSEEYTDP--SLKEQILKGRYAFGPLQ-WDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ccCCCcccccCCc--cHHHHHhcCcccccChh-hhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            9999999854332  23455667777665443 4679999999999999999999999999875

>KOG0197|consensus

Probab=100.00  E-value=1.6e-45  Score=301.19  Aligned_cols=219  Identities=20%  Similarity=0.307  Sum_probs=191.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY-CSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.|.+|+.++++|+ |++|++++++++.++.+|+||||+ .|+|.++++. .+..+...+...++.||++|++||+++
T Consensus       244 ~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~  322 (468)
T KOG0197|consen  244 SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK  322 (468)
T ss_pred             ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence            3478999999999999 999999999999988999999999 9999999997 467899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      +++||||..+||||+.+   ..+||+|||+++......  ........-+..|.|||.+....++.++||||||+++|||
T Consensus       323 ~~IHRDLAARNiLV~~~---~~vKIsDFGLAr~~~d~~--Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~  397 (468)
T KOG0197|consen  323 NYIHRDLAARNILVDED---LVVKISDFGLARLIGDDE--YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWEL  397 (468)
T ss_pred             CccchhhhhhheeeccC---ceEEEcccccccccCCCc--eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHH
Confidence            99999999999999876   899999999999443332  2222444567799999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      +| |+.||..+++.+..+.+.+..++..+       ..||+++.+++..||+.+|++|||++.+...++++....
T Consensus       398 fT~G~~py~~msn~ev~~~le~GyRlp~P-------~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  398 FTYGRVPYPGMSNEEVLELLERGYRLPRP-------EGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             hccCCCCCCCCCHHHHHHHHhccCcCCCC-------CCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence            99 99999998777766666555444333       789999999999999999999999999999999887643

>KOG0192|consensus

Probab=100.00  E-value=2.3e-44  Score=294.06  Aligned_cols=219  Identities=21%  Similarity=0.350  Sum_probs=187.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-ccEEEEecc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-YNILVMELL-GPSLEDLFQY-CSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-~~~~v~e~~-~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.|.+|+.++.+++ ||||++++|++.... ..++||||+ +|+|.+++.. ....++...+..++.||+.|+.|||+.
T Consensus        83 ~~~f~~E~~il~~l~-HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~  161 (362)
T KOG0192|consen   83 RKAFRREASLLSRLR-HPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE  161 (362)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            458999999999999 999999999999877 799999999 9999999986 378899999999999999999999999


Q ss_pred             C-ccccCCCCCceEeeccCCCC-eEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc--CCCCCCcchHHHHHHH
Q psy2769          87 K-IVHRDIKPDNFLMGVRENFN-TVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ--WLDQSPRDDLEALCYT  162 (257)
Q Consensus        87 ~-i~H~dl~~~nili~~~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~Dv~slg~~  162 (257)
                      + |+|+|||++|||++.+   . .+||+|||+++......   .......||+.|||||++.  ...++.++||||||++
T Consensus       162 ~~iIHrDLK~~NiLv~~~---~~~~KI~DFGlsr~~~~~~---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIv  235 (362)
T KOG0192|consen  162 GPIIHRDLKSDNILVDLK---GKTLKIADFGLSREKVISK---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIV  235 (362)
T ss_pred             CCeeecccChhhEEEcCC---CCEEEECCCccceeecccc---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHH
Confidence            9 9999999999999876   5 89999999997665432   1113368999999999999  5689999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      +|||+||+.||......   .....+   ......+.++..+++.+..++..||+.||..||++.+++..|+.+.....
T Consensus       236 lWEl~t~~~Pf~~~~~~---~~~~~v---~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~  308 (362)
T KOG0192|consen  236 LWELLTGEIPFEDLAPV---QVASAV---VVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS  308 (362)
T ss_pred             HHHHHHCCCCCCCCCHH---HHHHHH---HhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence            99999999999997542   111222   22233444446699999999999999999999999999999999888544

>KOG0598|consensus

Probab=100.00  E-value=1.3e-44  Score=283.78  Aligned_cols=227  Identities=22%  Similarity=0.267  Sum_probs=193.4

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .......+|..++.+++ ||+|++++..|++.+.+|+|++|+ ||.|.-.++ +++.|++..+..++.+|+.||.|||++
T Consensus        67 ~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~-~eg~F~E~~arfYlaEi~lAL~~LH~~  144 (357)
T KOG0598|consen   67 KEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQ-REGRFSEDRARFYLAEIVLALGYLHSK  144 (357)
T ss_pred             hhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCeEEEEEeccCCccHHHHHH-hcCCcchhHHHHHHHHHHHHHHHHHhC
Confidence            35667899999999998 999999999999999999999999 999999998 478899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+|||+||+||+++.+   |.++|+|||++......   ...+.++.||+.|||||++.+.+++..+|.||||+++|+|
T Consensus       145 gIiyRDlKPENILLd~~---GHi~LtDFgL~k~~~~~---~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeM  218 (357)
T KOG0598|consen  145 GIIYRDLKPENILLDEQ---GHIKLTDFGLCKEDLKD---GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEM  218 (357)
T ss_pred             CeeeccCCHHHeeecCC---CcEEEeccccchhcccC---CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHH
Confidence            99999999999999876   99999999999754332   2233668999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHhccccCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-YGKLRDSFRNLLENKERCEF  245 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-~~~~~~~l~~~~~~~~~~~~  245 (257)
                      ++|.+||.+   .+..+.+.++.+.+....    +..++.+.+++++++|..||++|.. ..++.+     +++   ..+
T Consensus       219 L~G~pPF~~---~~~~~~~~~I~~~k~~~~----p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~-----ik~---Hpf  283 (357)
T KOG0598|consen  219 LTGKPPFYA---EDVKKMYDKILKGKLPLP----PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEE-----IKR---HPF  283 (357)
T ss_pred             hhCCCCCcC---ccHHHHHHHHhcCcCCCC----CccCCHHHHHHHHHHhccCHHHhcCCCCChHH-----hhc---Ccc
Confidence            999999998   566677777777663333    1448999999999999999999963 111111     343   347


Q ss_pred             CCCccccccccC
Q psy2769         246 DLRYDWTLLERK  257 (257)
Q Consensus       246 ~~~~~~~~~~~~  257 (257)
                      ...++|+.|.+|
T Consensus       284 F~~inW~~l~~k  295 (357)
T KOG0598|consen  284 FKGINWEKLLAK  295 (357)
T ss_pred             cccCCHHHHHhc
Confidence            788999988765

>KOG0591|consensus

Probab=100.00  E-value=6e-45  Score=276.10  Aligned_cols=215  Identities=20%  Similarity=0.261  Sum_probs=180.9

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEe-eeeeC-CccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMG-YGTSG-DYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~-~~~~~-~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ..++...+|+.+|++|+ ||||+++++ .|..+ ..+++|||+| +|+|.+.++..   .+.+++.++++++.|++.||+
T Consensus        60 k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~  138 (375)
T KOG0591|consen   60 KARQDCVKEISLLKQLN-HPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY  138 (375)
T ss_pred             HHHHHHHHHHHHHHhcC-CchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence            45678899999999999 999999998 44444 4589999999 99999999865   568999999999999999999


Q ss_pred             HHHh--CC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          82 HVHR--KK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        82 ~lh~--~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .+|.  .+  +.||||||.||+++.+   |.+||+|||+++.+.+...   -....+|||.||+||.+++.++++++|||
T Consensus       139 ~cH~~~~r~~VmHRDIKPaNIFl~~~---gvvKLGDfGL~r~l~s~~t---fA~S~VGTPyYMSPE~i~~~~Y~~kSDiW  212 (375)
T KOG0591|consen  139 HCHSKIPRGTVMHRDIKPANIFLTAN---GVVKLGDFGLGRFLSSKTT---FAHSLVGTPYYMSPERIHESGYNFKSDIW  212 (375)
T ss_pred             HHhccccccceeeccCcchheEEcCC---CceeeccchhHhHhcchhH---HHHhhcCCCcccCHHHHhcCCCCcchhHH
Confidence            9998  45  8999999999999876   9999999999988765432   22568999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      |+||++|||+.-++||.+.   +....-.+|.++..+.-+.   ..+|..+..+|..|+..||+.||+.-.++..++.
T Consensus       213 slGCllyEMcaL~~PF~g~---n~~~L~~KI~qgd~~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  213 SLGCLLYEMCALQSPFYGD---NLLSLCKKIEQGDYPPLPD---EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HHHHHHHHHHhcCCCcccc---cHHHHHHHHHcCCCCCCcH---HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            9999999999999999984   5555556666665443322   4578899999999999999999985444444444

>KOG0595|consensus

Probab=100.00  E-value=1e-43  Score=281.62  Aligned_cols=210  Identities=21%  Similarity=0.306  Sum_probs=179.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .++-+..|+.+++.|+ ||||+.+++++..++.+|+||||| ||+|.++++. .+.+++.++..++.|++.||++||+++
T Consensus        52 ~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~-~~~l~e~t~r~Fm~QLA~alq~L~~~~  129 (429)
T KOG0595|consen   52 LVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRR-RGRLPEATARHFMQQLASALQFLHENN  129 (429)
T ss_pred             HHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5667889999999999 999999999999999999999999 9999999995 568999999999999999999999999


Q ss_pred             ccccCCCCCceEeecc-CCC--CeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVR-ENF--NTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        88 i~H~dl~~~nili~~~-~~~--~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      |+||||||.|||++.. ...  ..+||+|||+++...+..    -..+..|++.|||||++....|+.|+|+||+|+++|
T Consensus       130 IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~----~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ily  205 (429)
T KOG0595|consen  130 IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS----MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILY  205 (429)
T ss_pred             eeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh----HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHH
Confidence            9999999999999875 222  679999999999886543    225678999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKL  229 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  229 (257)
                      ++++|+.||...   +..+...++.+.....+  .....+++...+++...+..++.+|.+.++.
T Consensus       206 q~l~g~~Pf~a~---t~~eL~~~~~k~~~~~~--~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~  265 (429)
T KOG0595|consen  206 QCLTGKPPFDAE---TPKELLLYIKKGNEIVP--VLPAELSNPLRELLISLLQRNPKDRISFEDF  265 (429)
T ss_pred             HHHhCCCCcccc---CHHHHHHHHhccccccC--chhhhccCchhhhhhHHHhcCccccCchHHh
Confidence            999999999984   44444445554443333  2335577778899999999999999876654

>KOG0198|consensus

Probab=100.00  E-value=7.3e-44  Score=283.18  Aligned_cols=214  Identities=26%  Similarity=0.332  Sum_probs=176.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC--ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD--YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~--~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.++.+|+ ||||++++|......  .++++|||+ +|+|.+++...+..+++..+..++.|++.||.|||++
T Consensus        58 ~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~  136 (313)
T KOG0198|consen   58 SESLEREIRILSRLN-HPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK  136 (313)
T ss_pred             HHHHHHHHHHHHhCC-CCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            456899999999999 999999999855544  689999999 9999999997554799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~  165 (257)
                      |++|+||||+|||++.+  ++.+||+|||.+.................||+.|||||++..+ ...+++|||||||++.|
T Consensus       137 g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvE  214 (313)
T KOG0198|consen  137 GIVHCDIKPANILLDPS--NGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVE  214 (313)
T ss_pred             CEeccCcccceEEEeCC--CCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEe
Confidence            99999999999999862  2789999999987765422222223568899999999999953 34469999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+||..||...  ......+..+....   ..+.++..+|+...+++..|+..||+.|||++++++
T Consensus       215 M~Tg~~PW~~~--~~~~~~~~~ig~~~---~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~  275 (313)
T KOG0198|consen  215 MLTGKPPWSEF--FEEAEALLLIGRED---SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLE  275 (313)
T ss_pred             ccCCCCcchhh--cchHHHHHHHhccC---CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            99999999974  22222222222222   334667889999999999999999999999999987

>KOG0583|consensus

Probab=100.00  E-value=3e-42  Score=283.89  Aligned_cols=214  Identities=20%  Similarity=0.230  Sum_probs=184.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++++..||||+++++++.+...+++||||+ ||.|.+++.. .+++++..+.+++.|+++|++|+|++|
T Consensus        62 ~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~g  140 (370)
T KOG0583|consen   62 LDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRG  140 (370)
T ss_pred             cchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCC
Confidence            45567789999999999999999999999999999999999 9999999996 789999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-C-CCcchHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-Q-SPRDDLEALCYTLVY  165 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~-~~~~Dv~slg~~l~~  165 (257)
                      |+||||||+|++++.+.  +++||+|||++....   ..........|++.|+|||++.+.. | +.++||||+|+++|.
T Consensus       141 i~HRDLK~ENilld~~~--~~~Kl~DFG~s~~~~---~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~  215 (370)
T KOG0583|consen  141 IVHRDLKPENILLDGNE--GNLKLSDFGLSAISP---GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYV  215 (370)
T ss_pred             EeeCCCCHHHEEecCCC--CCEEEeccccccccC---CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHH
Confidence            99999999999997542  789999999997653   1222337789999999999999987 7 589999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCC-cHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT-PPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      |++|..||..   .+....+..+..+...++     ..+ ++++.+++.+||..||.+|+++.+++  ...+++
T Consensus       216 ml~G~~PF~d---~~~~~l~~ki~~~~~~~p-----~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~--~h~w~~  279 (370)
T KOG0583|consen  216 LLCGRLPFDD---SNVPNLYRKIRKGEFKIP-----SYLLSPEARSLIEKMLVPDPSTRITLLEIL--EHPWFQ  279 (370)
T ss_pred             HHhCCCCCCC---ccHHHHHHHHhcCCccCC-----CCcCCHHHHHHHHHHcCCCcccCCCHHHHh--hChhhc
Confidence            9999999998   444555555655555544     566 99999999999999999999999998  444444

>KOG0661|consensus

Probab=100.00  E-value=6e-43  Score=281.80  Aligned_cols=209  Identities=18%  Similarity=0.212  Sum_probs=177.1

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCC-ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGD-YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR   91 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~-~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~   91 (257)
                      -.+|+..+.+|..||||+++++.+.+.+ .+++|||||..+|+++++.+++.|++..+..|++||++||+|+|++|+.||
T Consensus        55 nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHR  134 (538)
T KOG0661|consen   55 NLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHR  134 (538)
T ss_pred             HHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            3679999999998999999999998877 899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-CCCCCCcchHHHHHHHHHHHHhCC
Q psy2769          92 DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDDLEALCYTLVYFLRGK  170 (257)
Q Consensus        92 dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~Dv~slg~~l~~l~~g~  170 (257)
                      |+||+|||+...   ..+||+|||+++...+..    .-.+++.|..|.|||++. ...|+.+.|+|++||+++|+++-+
T Consensus       135 DlKPENiLi~~~---~~iKiaDFGLARev~Skp----PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLr  207 (538)
T KOG0661|consen  135 DLKPENILISGN---DVIKIADFGLAREVRSKP----PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLR  207 (538)
T ss_pred             cCChhheEeccc---ceeEecccccccccccCC----CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhc
Confidence            999999999854   689999999998775542    226789999999999875 556799999999999999999999


Q ss_pred             CCCCCCCCccHHHHHHHHHHHHhh---C----------------------ChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         171 LPWQSIKSDNEETRMQRVTEMKLT---M----------------------TPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       171 ~p~~~~~~~~~~~~~~~~~~~~~~---~----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      +.|.+.+.-+   .+.+|++....   .                      ......+.++.++.++|.+|+++||.+|||
T Consensus       208 PLFPG~sE~D---qi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpT  284 (538)
T KOG0661|consen  208 PLFPGASEID---QIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPT  284 (538)
T ss_pred             ccCCCCcHHH---HHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCcc
Confidence            9999854433   23333322111   1                      122234568899999999999999999999


Q ss_pred             hHHHHH
Q psy2769         226 YGKLRD  231 (257)
Q Consensus       226 ~~~~~~  231 (257)
                      |.++++
T Consensus       285 A~~al~  290 (538)
T KOG0661|consen  285 ASQALQ  290 (538)
T ss_pred             HHHHhc
Confidence            999876

>KOG0578|consensus

Probab=100.00  E-value=2.7e-43  Score=289.46  Aligned_cols=210  Identities=22%  Similarity=0.350  Sum_probs=182.4

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+-+.+|+.++...+ |+||+++++.|..++.+++||||+ ||+|.|++.  ...+++.++..++++++.||+|||..
T Consensus       312 ~~keLilnEi~Vm~~~~-H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt--~~~~~E~qIA~Icre~l~aL~fLH~~  388 (550)
T KOG0578|consen  312 PKKELLLNEILVMRDLH-HPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVT--KTRMTEGQIAAICREILQGLKFLHAR  388 (550)
T ss_pred             CchhhhHHHHHHHHhcc-chHHHHHHHHhcccceeEEEEeecCCCchhhhhh--cccccHHHHHHHHHHHHHHHHHHHhc
Confidence            44567899999999999 999999999999889999999999 999999999  56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+|+|||.+||+++.+   |.+||+|||++..+......   ....+||+.|||||+.....|+++.||||||++++||
T Consensus       389 gIiHrDIKSDnILL~~~---g~vKltDFGFcaqi~~~~~K---R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEM  462 (550)
T KOG0578|consen  389 GIIHRDIKSDNILLTMD---GSVKLTDFGFCAQISEEQSK---RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEM  462 (550)
T ss_pred             ceeeeccccceeEeccC---CcEEEeeeeeeeccccccCc---cccccCCCCccchhhhhhcccCccccchhhhhHHHHH
Confidence            99999999999999877   88999999999887665432   2778999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.|++||-.   .+....+..+...-.  +.-..+..+++.+++++.+||..|+++|+++.++++
T Consensus       463 veGEPPYln---E~PlrAlyLIa~ng~--P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  463 VEGEPPYLN---ENPLRALYLIATNGT--PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             hcCCCCccC---CChHHHHHHHhhcCC--CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            999999997   334343333332211  122233679999999999999999999999999986

>KOG0582|consensus

Probab=100.00  E-value=4e-42  Score=275.19  Aligned_cols=220  Identities=17%  Similarity=0.210  Sum_probs=179.4

Q ss_pred             CCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q psy2769           5 PVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         5 ~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ...+....+.+|+..+..+. ||||++.+..|..+..+|+||.|| +||+.++++.. ...+++..+..+++++++||.|
T Consensus        63 kc~~~ld~l~kE~~~msl~~-HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~Y  141 (516)
T KOG0582|consen   63 KCNNDLDALRKEVQTMSLID-HPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDY  141 (516)
T ss_pred             hhhhhHHHHHHHHHHhhhcC-CCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHH
Confidence            34455678999999999998 999999999999999999999999 99999999975 6679999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-CCCCccCCCCcccccChhHhc--CCCCCCcchHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-PRIRTRGLTGTARYASVNAHQ--WLDQSPRDDLEAL  159 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~Dv~sl  159 (257)
                      ||++|.+|||||+.|||++.+   |.|+|+|||....+..+.. ...+-..++|++.|||||++.  ..+|+.|+|||||
T Consensus       142 LH~~G~IHRdvKAgnILi~~d---G~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSf  218 (516)
T KOG0582|consen  142 LHQNGHIHRDVKAGNILIDSD---GTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSF  218 (516)
T ss_pred             HHhcCceecccccccEEEcCC---CcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhh
Confidence            999999999999999999877   9999999997665544431 111114568999999999954  3368999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh-----CChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT-----MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++..||.+|..||..+.+-   +.+..-.++..+     ..+.+....++..++++|..||..||++|||+.++++
T Consensus       219 GITA~ELA~G~aPf~k~pPm---kvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  219 GITACELAHGHAPFSKYPPM---KVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             hHHHHHHhcCCCCcccCChH---HHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            99999999999999986542   221111111111     1122223457778999999999999999999999976

>KOG0616|consensus

Probab=100.00  E-value=2.1e-42  Score=263.82  Aligned_cols=223  Identities=22%  Similarity=0.305  Sum_probs=193.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+...+|..+++.+. ||+++++++.+.+..++++||||. ||.|.++++. .++|++..++.++.|++.||.|||+++
T Consensus        87 QveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk-~~rF~e~~arFYAAeivlAleylH~~~  164 (355)
T KOG0616|consen   87 QVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRK-SGRFSEPHARFYAAEIVLALEYLHSLD  164 (355)
T ss_pred             HHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeEEEEEeccCCccHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHhcC
Confidence            3457889999999999 999999999999999999999999 9999999995 568999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |++||+||+||+++++   |.+||+|||++......      +.+..|||.|+|||++...+++..+|.|+||+++|||+
T Consensus       165 iiYRDLKPENiLlD~~---G~iKitDFGFAK~v~~r------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMl  235 (355)
T KOG0616|consen  165 IIYRDLKPENLLLDQN---GHIKITDFGFAKRVSGR------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEML  235 (355)
T ss_pred             eeeccCChHHeeeccC---CcEEEEeccceEEecCc------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHH
Confidence            9999999999999877   99999999999876432      37889999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-ChHHHHHHHHHHHHhccccCCC
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-NYGKLRDSFRNLLENKERCEFD  246 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~~~~~l~~~~~~~~~~~~~  246 (257)
                      .|.+||..   .+....+++|..++..++     +.+++.+++|++.+|+.|-.+|. +..   +..+++ ++   ....
T Consensus       236 aG~pPF~~---~~~~~iY~KI~~~~v~fP-----~~fs~~~kdLl~~LL~vD~t~R~gnlk---nG~~dI-k~---H~wF  300 (355)
T KOG0616|consen  236 AGYPPFYD---DNPIQIYEKILEGKVKFP-----SYFSSDAKDLLKKLLQVDLTKRFGNLK---NGVEDI-KN---HPWF  300 (355)
T ss_pred             cCCCCCcC---CChHHHHHHHHhCcccCC-----cccCHHHHHHHHHHHhhhhHhhhcCcC---CCcccc-cc---Cccc
Confidence            99999998   455788888988888776     88999999999999999999993 221   111111 11   3355


Q ss_pred             CCccccccccC
Q psy2769         247 LRYDWTLLERK  257 (257)
Q Consensus       247 ~~~~~~~~~~~  257 (257)
                      ...+|+.|.+|
T Consensus       301 ~~v~W~~i~~r  311 (355)
T KOG0616|consen  301 KGVDWEAILQR  311 (355)
T ss_pred             ccccHHHHhhc
Confidence            56788877653

>KOG0588|consensus

Probab=100.00  E-value=4.4e-42  Score=286.54  Aligned_cols=207  Identities=21%  Similarity=0.269  Sum_probs=189.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .....+.+|+-+|+-|. |||++++|+.++...++|+|.||+ ||.|++++-. .+++++.++.+++.||+.|+.|+|..
T Consensus        54 s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~-kG~l~e~eaa~ff~QIi~gv~yCH~~  131 (786)
T KOG0588|consen   54 SQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVR-KGPLPEREAAHFFRQILDGVSYCHAF  131 (786)
T ss_pred             ccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEEEEEEecCCchhHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            44678999999999999 999999999999999999999999 9999999985 67899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~  165 (257)
                      +|+|||+||+|++++..   +++||+|||++....++    ....+..|.+.|++||++.|.+| +.++||||.|||+|.
T Consensus       132 ~icHRDLKpENlLLd~~---~nIKIADFGMAsLe~~g----klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfA  204 (786)
T KOG0588|consen  132 NICHRDLKPENLLLDVK---NNIKIADFGMASLEVPG----KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFA  204 (786)
T ss_pred             cceeccCCchhhhhhcc---cCEeeeccceeecccCC----ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHH
Confidence            99999999999999876   67999999999765443    23477899999999999999998 789999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||++   ++....+.++.++.+.++     ..+|.++.+||++|+..||.+|+|.++|.+
T Consensus       205 LLtG~LPFdD---dNir~LLlKV~~G~f~MP-----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  205 LLTGKLPFDD---DNIRVLLLKVQRGVFEMP-----SNISSEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             HHhCCCCCCC---ccHHHHHHHHHcCcccCC-----CcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence            9999999995   678888889998888776     889999999999999999999999999876

>KOG0593|consensus

Probab=100.00  E-value=4e-42  Score=263.19  Aligned_cols=219  Identities=16%  Similarity=0.198  Sum_probs=183.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+-..+|++++++|+ |||++.++.+|.....+++|+|||..++.+-++.....++.+.+.++++|++.|+.|+|+++++
T Consensus        45 kKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~I  123 (396)
T KOG0593|consen   45 KKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCI  123 (396)
T ss_pred             HHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCee
Confidence            446788999999999 9999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      ||||||+||+++.+   +.+||||||+++.+.......   ..++.|..|.|||.+.+ ..|+...|||++||++.||++
T Consensus       124 HRDIKPENILit~~---gvvKLCDFGFAR~L~~pgd~Y---TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~  197 (396)
T KOG0593|consen  124 HRDIKPENILITQN---GVVKLCDFGFARTLSAPGDNY---TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLT  197 (396)
T ss_pred             cccCChhheEEecC---CcEEeccchhhHhhcCCcchh---hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhc
Confidence            99999999999877   999999999998876432222   56789999999999998 578999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCC--------------------------hhhhhcCCcHHHHHHHHHHhcCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMT--------------------------PEAICEGTPPEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~li~~~l~~~p~~  222 (257)
                      |++.|.+.++-+..-.   |........                          .+.-.+.++.-..++++.||+.||++
T Consensus       198 G~pL~PG~SDiDQLy~---I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~  274 (396)
T KOG0593|consen  198 GEPLWPGRSDIDQLYL---IRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDD  274 (396)
T ss_pred             CCcCCCCcchHHHHHH---HHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccc
Confidence            9999999654443222   222211111                          12234567778999999999999999


Q ss_pred             CCChHHHHH--HHHHHHH
Q psy2769         223 EPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       223 Rp~~~~~~~--~l~~~~~  238 (257)
                      |++.++++.  .+..++.
T Consensus       275 R~sc~qll~H~yFd~~~e  292 (396)
T KOG0593|consen  275 RLSCEQLLHHPYFDGFIE  292 (396)
T ss_pred             cccHHHHhcChHHHHHHH
Confidence            999999975  4454444

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=4e-40  Score=272.01  Aligned_cols=220  Identities=19%  Similarity=0.269  Sum_probs=175.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-CccEEEEecc-CCCHHHHHHHhc--------------------------
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-DYNILVMELL-GPSLEDLFQYCS--------------------------   61 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-~~~~~v~e~~-~~~L~~~~~~~~--------------------------   61 (257)
                      .+.+.+|+.++..+.+||||+++++++... ...+++|||+ +|+|.+++....                          
T Consensus        54 ~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (338)
T cd05102          54 HKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV  133 (338)
T ss_pred             HHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence            356889999999996699999999988754 4688999999 999999987421                          


Q ss_pred             -----------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCC
Q psy2769          62 -----------------------------------KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENF  106 (257)
Q Consensus        62 -----------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~  106 (257)
                                                         ..++..++..++.|++.||.|||+.|++|+||||+||+++.+   
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~---  210 (338)
T cd05102         134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN---  210 (338)
T ss_pred             ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC---
Confidence                                               247788899999999999999999999999999999999766   


Q ss_pred             CeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHH
Q psy2769         107 NTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRM  185 (257)
Q Consensus       107 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~  185 (257)
                      +.++|+|||++........ ........++..|+|||++.+..++.++||||||+++|+|++ |..||........  ..
T Consensus       211 ~~~kl~DfG~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~~  287 (338)
T cd05102         211 NVVKICDFGLARDIYKDPD-YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--FC  287 (338)
T ss_pred             CcEEEeecccccccccCcc-hhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--HH
Confidence            8899999999875432211 111123345678999999998889999999999999999997 9999987543221  11


Q ss_pred             HHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         186 QRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      ..+...    .....+..+++.+.+++.+||+.||++||++.++++.|++++.+
T Consensus       288 ~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         288 QRLKDG----TRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE  337 (338)
T ss_pred             HHHhcC----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            111111    11222357889999999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0597|consensus

Probab=100.00  E-value=1.8e-41  Score=278.62  Aligned_cols=214  Identities=20%  Similarity=0.259  Sum_probs=181.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ....+.+|++++..|+ ||||+.++++|+++.++|+|.|||.|+|..++.. .+.++++.+..++.++++||.|||+.+|
T Consensus        44 ~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~vVte~a~g~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~ri  121 (808)
T KOG0597|consen   44 ELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRI  121 (808)
T ss_pred             HHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEEEehhhhhhHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCc
Confidence            4456999999999999 9999999999999999999999996699999995 7789999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+|+||.||++...   +.+|+||||+++....+....   ....|||.|||||+..+.+++..+|+||+||++||+++
T Consensus       122 lhrd~kPqniLl~~~---~~~KlcdFg~Ar~m~~~t~vl---tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~  195 (808)
T KOG0597|consen  122 LHRDMKPQNILLEKG---GTLKLCDFGLARAMSTNTSVL---TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYV  195 (808)
T ss_pred             ccccCCcceeeecCC---CceeechhhhhhhcccCceee---eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhc
Confidence            999999999999766   899999999998765543222   55679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      |++||..   .........|...  +..+   +...+.+|.++++.+|.+||..|.+..+++.  +.+.-+.
T Consensus       196 G~PPF~a---~si~~Lv~~I~~d--~v~~---p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~  259 (808)
T KOG0597|consen  196 GQPPFYA---RSITQLVKSILKD--PVKP---PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN  259 (808)
T ss_pred             CCCCchH---HHHHHHHHHHhcC--CCCC---cccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence            9999987   3333333333322  1222   2578899999999999999999999998864  4444333

>KOG0033|consensus

Probab=100.00  E-value=1.1e-40  Score=248.62  Aligned_cols=213  Identities=22%  Similarity=0.277  Sum_probs=189.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+-+.|+ ||||+++.+.....+..|+|+|++ |+.|..-+-. ..-+++..+...++||+.+|.|.|.+|
T Consensus        53 ~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n~  130 (355)
T KOG0033|consen   53 DFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSNG  130 (355)
T ss_pred             cHHHHHHHHHHHHhcC-CCcEeehhhhhcccceeEEEEecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            6788999999999999 999999999999999999999999 8888766653 356788899999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+|||+||.|+++.+.++..-+||+|||++......    .....++|||.|+|||+++..+++..+|||+-|+++|-++
T Consensus       131 IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g----~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL  206 (355)
T KOG0033|consen  131 IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG----EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL  206 (355)
T ss_pred             ceeccCChhheeeeeccCCCceeecccceEEEeCCc----cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHH
Confidence            999999999999998767778999999999887622    2226689999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .|.+||.+   .+....++.|.++...++.+.. +.++++.++|+++||..||.+|+|+.+.++
T Consensus       207 ~G~~PF~~---~~~~rlye~I~~g~yd~~~~~w-~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  207 VGYPPFWD---EDQHRLYEQIKAGAYDYPSPEW-DTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             hCCCCCCC---ccHHHHHHHHhccccCCCCccc-CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            99999997   5677788889988888776554 789999999999999999999999987753

>KOG0599|consensus

Probab=100.00  E-value=4.3e-41  Score=254.52  Aligned_cols=220  Identities=19%  Similarity=0.248  Sum_probs=192.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ++...+|+.++.++.|||+|+.+.|+++++.++++|+|.| .|.|+|++.. .-.+++....++++|++.|+.|||.++|
T Consensus        66 ~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~I  144 (411)
T KOG0599|consen   66 REATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARNI  144 (411)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhhh
Confidence            4567789999999999999999999999999999999999 9999999994 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc------CCCCCCcchHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ------WLDQSPRDDLEALCYT  162 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~~Dv~slg~~  162 (257)
                      ||+|+||+||+++.+   -+++|+|||++..+.++    .......|||.|+|||.+.      ..+|+...|+|+.|++
T Consensus       145 VHRDLKpENILlddn---~~i~isDFGFa~~l~~G----ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVI  217 (411)
T KOG0599|consen  145 VHRDLKPENILLDDN---MNIKISDFGFACQLEPG----EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVI  217 (411)
T ss_pred             hhcccChhheeeccc---cceEEeccceeeccCCc----hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHH
Confidence            999999999999866   88999999999887654    3446778999999999984      2357889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHHHhc
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLLENK  240 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~~~  240 (257)
                      +|-++.|.+||-.   ....-++..+.++++.+..++. .+++....++|.+||..||++|.|+++++.  ++.++..++
T Consensus       218 myTLLaGcpPFwH---RkQmlMLR~ImeGkyqF~speW-adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~  293 (411)
T KOG0599|consen  218 MYTLLAGCPPFWH---RKQMLMLRMIMEGKYQFRSPEW-ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQ  293 (411)
T ss_pred             HHHHHcCCCchhH---HHHHHHHHHHHhcccccCCcch-hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhc
Confidence            9999999999986   3445566667888888766554 688999999999999999999999999976  666665544


Q ss_pred             c
Q psy2769         241 E  241 (257)
Q Consensus       241 ~  241 (257)
                      .
T Consensus       294 ~  294 (411)
T KOG0599|consen  294 A  294 (411)
T ss_pred             c
Confidence            3

>KOG1026|consensus

Probab=100.00  E-value=6.8e-41  Score=287.00  Aligned_cols=222  Identities=19%  Similarity=0.306  Sum_probs=192.2

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------CC----CCHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------KR----FSLKTVLMLA   73 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------~~----~~~~~~~~~~   73 (257)
                      +.+++|++|++++..|+ ||||++++|.|..++..|+|+||| .|+|.++++...         ..    ++..+.+.++
T Consensus       531 ~~~~dF~REaeLla~l~-H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA  609 (774)
T KOG1026|consen  531 QARQDFRREAELLAELQ-HPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIA  609 (774)
T ss_pred             HHHHHHHHHHHHHHhcc-CCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHH
Confidence            46789999999999999 999999999999999999999999 999999998651         23    7888999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .||+.|+.||.++.+|||||..+|+||+.+   -.|||+|||+++..-+...-... ....-+.+|||||.+..++++.+
T Consensus       610 ~QIAaGM~YLs~~~FVHRDLATRNCLVge~---l~VKIsDfGLsRdiYssDYYk~~-~~t~lPIRWMppEsIly~kFTte  685 (774)
T KOG1026|consen  610 TQIAAGMEYLSSHHFVHRDLATRNCLVGEN---LVVKISDFGLSRDIYSSDYYKVR-GNTLLPIRWMPPESILYGKFTTE  685 (774)
T ss_pred             HHHHHHHHHHHhCcccccchhhhhceeccc---eEEEecccccchhhhhhhhhccc-CCceeeeecCCHHHhhcCcccch
Confidence            999999999999999999999999999766   89999999999877665433222 23345679999999999999999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||+||++||+++ |..||.+..+.+   -+..+.++..    -+.+.++|.++++|+..||+.+|.+||++.+|-..
T Consensus       686 SDVWs~GVvLWEIFsyG~QPy~glSn~E---VIe~i~~g~l----L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~  758 (774)
T KOG1026|consen  686 SDVWSFGVVLWEIFSYGKQPYYGLSNQE---VIECIRAGQL----LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSR  758 (774)
T ss_pred             hhhhhhhhhhhhhhccccCcccccchHH---HHHHHHcCCc----ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            999999999999998 999999976544   3444444443    23348899999999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |+.+.....
T Consensus       759 L~~~~~~s~  767 (774)
T KOG1026|consen  759 LQAWAQASP  767 (774)
T ss_pred             HHHHHhcCc
Confidence            999988665

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=9.7e-40  Score=263.19  Aligned_cols=211  Identities=14%  Similarity=0.151  Sum_probs=174.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+.+.+|+.++.++. ||||+++++++.+    ....+++|||+ +|+|.+++.. .+.+++.....++.+++.||.++|
T Consensus        62 ~~~~~~E~~~l~~l~-h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH  139 (283)
T PHA02988         62 IDITENEIKNLRRID-SNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLY  139 (283)
T ss_pred             HHHHHHHHHHHHhcC-CCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHH
Confidence            356779999999998 9999999999876    34689999999 9999999985 567899999999999999999999


Q ss_pred             h-CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC--CCCCCcchHHHHHH
Q psy2769          85 R-KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW--LDQSPRDDLEALCY  161 (257)
Q Consensus        85 ~-~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~Dv~slg~  161 (257)
                      + .+++|+||+|+||+++.+   +.+||+|||++.......      ....++..|+|||.+.+  ..++.++||||||+
T Consensus       140 ~~~~~~Hrdlkp~nill~~~---~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGv  210 (283)
T PHA02988        140 KYTNKPYKNLTSVSFLVTEN---YKLKIICHGLEKILSSPP------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGV  210 (283)
T ss_pred             hcCCCCCCcCChhhEEECCC---CcEEEcccchHhhhcccc------ccccCcccccCHHHhhhccccccchhhhhHHHH
Confidence            8 499999999999999876   899999999986543211      34467889999999976  57899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      ++|+|++|..||.....   ......+......   ...+..+|+.+.+++.+||+.||++|||++++++.|+++.
T Consensus       211 il~el~~g~~Pf~~~~~---~~~~~~i~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        211 VLWEIFTGKIPFENLTT---KEIYDLIINKNNS---LKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             HHHHHHHCCCCCCCCCH---HHHHHHHHhcCCC---CCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            99999999999987532   2222222222111   2222468999999999999999999999999999998865

>KOG0694|consensus

Probab=100.00  E-value=6.3e-41  Score=280.85  Aligned_cols=229  Identities=21%  Similarity=0.265  Sum_probs=190.2

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +..++..+.|.+++....+||++++++..|++..++|+||||+ ||++.....  ...|++..+..++..++.||.|||+
T Consensus       409 ~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~  486 (694)
T KOG0694|consen  409 RDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHE  486 (694)
T ss_pred             cccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHh
Confidence            3467788999999999999999999999999999999999999 888443333  5789999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      +||++||||.+|||++.+   |.+||+|||+++.....   ...+.++.||+.|+|||++.+..|+...|.|||||++||
T Consensus       487 ~~IIYRDlKLdNiLLD~e---Gh~kiADFGlcKe~m~~---g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlye  560 (694)
T KOG0694|consen  487 NGIIYRDLKLDNLLLDTE---GHVKIADFGLCKEGMGQ---GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYE  560 (694)
T ss_pred             cCceeeecchhheEEccc---CcEEecccccccccCCC---CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHH
Confidence            999999999999999887   99999999999865433   234488999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCC
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEF  245 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~  245 (257)
                      |+.|+.||.+   ++.++....|....     +..+-.+|.+..++++++|..+|++|.-+.   +.=.+-++.+.   |
T Consensus       561 ML~Gq~PF~g---ddEee~FdsI~~d~-----~~yP~~ls~ea~~il~~ll~k~p~kRLG~~---e~d~~~i~~hp---F  626 (694)
T KOG0694|consen  561 MLVGESPFPG---DDEEEVFDSIVNDE-----VRYPRFLSKEAIAIMRRLLRKNPEKRLGSG---ERDAEDIKKHP---F  626 (694)
T ss_pred             HHcCCCCCCC---CCHHHHHHHHhcCC-----CCCCCcccHHHHHHHHHHhccCcccccCCC---CCCchhhhhCC---c
Confidence            9999999998   34444444444333     233378999999999999999999998552   11112223333   7


Q ss_pred             CCCccccccccC
Q psy2769         246 DLRYDWTLLERK  257 (257)
Q Consensus       246 ~~~~~~~~~~~~  257 (257)
                      -...||+.|++|
T Consensus       627 Fr~i~w~~L~~r  638 (694)
T KOG0694|consen  627 FRSIDWDDLLNR  638 (694)
T ss_pred             cccCCHHHHhhc
Confidence            778899999876

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.6e-39  Score=264.62  Aligned_cols=220  Identities=16%  Similarity=0.207  Sum_probs=172.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc------------------CCCCHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS------------------KRFSLKTVL   70 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~------------------~~~~~~~~~   70 (257)
                      ...+.+|+.++.++. ||||+++++++......+++|||+ +++|.+++....                  ..++...+.
T Consensus        63 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (304)
T cd05096          63 RNDFLKEVKILSRLK-DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLL  141 (304)
T ss_pred             HHHHHHHHHHHhhcC-CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHH
Confidence            446889999999997 999999999999988999999999 999999986431                  236778899


Q ss_pred             HHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC
Q psy2769          71 MLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ  150 (257)
Q Consensus        71 ~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  150 (257)
                      .++.|++.||.|||+.|++|+||||+||+++.+   +.++|+|||++.......... ......++..|+|||.+.+..+
T Consensus       142 ~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~---~~~kl~DfG~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~  217 (304)
T cd05096         142 HVALQIASGMKYLSSLNFVHRDLATRNCLVGEN---LTIKIADFGMSRNLYAGDYYR-IQGRAVLPIRWMAWECILMGKF  217 (304)
T ss_pred             HHHHHHHHHHHHHHHCCccccCcchhheEEcCC---ccEEECCCccceecccCceeE-ecCcCCCCccccCHHHHhcCCC
Confidence            999999999999999999999999999999866   889999999987653332111 1133445778999999988889


Q ss_pred             CCcchHHHHHHHHHHHHh--CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHH
Q psy2769         151 SPRDDLEALCYTLVYFLR--GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGK  228 (257)
Q Consensus       151 ~~~~Dv~slg~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  228 (257)
                      +.++||||||+++|+|++  +..||...........................++.+|+.+.+++.+||..+|.+||++++
T Consensus       218 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~  297 (304)
T cd05096         218 TTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSD  297 (304)
T ss_pred             CchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHH
Confidence            999999999999999986  667888754332222211111111111111123568899999999999999999999999


Q ss_pred             HHHHHH
Q psy2769         229 LRDSFR  234 (257)
Q Consensus       229 ~~~~l~  234 (257)
                      +.+.|+
T Consensus       298 i~~~l~  303 (304)
T cd05096         298 IHAFLT  303 (304)
T ss_pred             HHHHHh
Confidence            988876

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.8e-39  Score=262.44  Aligned_cols=213  Identities=17%  Similarity=0.176  Sum_probs=170.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ....+.+|+.+++++. ||||+++++++.+....++||||+.++|.+++......++...+..++.|++.||+|||+.|+
T Consensus        46 ~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  124 (288)
T cd07871          46 APCTAIREVSLLKNLK-HANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI  124 (288)
T ss_pred             cchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            3456789999999998 999999999999988999999999779999988656668999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||||+||+++.+   +.++|+|||++........   ......+++.|+|||.+.+ ..++.++||||+|+++|+|+
T Consensus       125 vH~dlkp~Nil~~~~---~~~kl~DfG~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~  198 (288)
T cd07871         125 LHRDLKPQNLLINEK---GELKLADFGLARAKSVPTK---TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMA  198 (288)
T ss_pred             ccCCCCHHHEEECCC---CCEEECcCcceeeccCCCc---cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHH
Confidence            999999999999766   8899999999875433211   1134567899999999875 45789999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhC-------------------------ChhhhhcCCcHHHHHHHHHHhcCCCCC
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTM-------------------------TPEAICEGTPPEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~  222 (257)
                      +|..||.+......   +..+.......                         ........+++++.+++++||..||.+
T Consensus       199 ~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~  275 (288)
T cd07871         199 TGRPMFPGSTVKEE---LHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKS  275 (288)
T ss_pred             hCCCCCCCCCHHHH---HHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCccc
Confidence            99999987433222   22221110000                         001112356788999999999999999


Q ss_pred             CCChHHHHH
Q psy2769         223 EPNYGKLRD  231 (257)
Q Consensus       223 Rp~~~~~~~  231 (257)
                      |||++++++
T Consensus       276 R~t~~~~l~  284 (288)
T cd07871         276 RISAEAALR  284 (288)
T ss_pred             CCCHHHHhc
Confidence            999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0659|consensus

Probab=100.00  E-value=1.3e-39  Score=245.07  Aligned_cols=214  Identities=15%  Similarity=0.121  Sum_probs=179.7

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      -...+|++.++.++ ||||+.+.|+|.+.+.+.+|+||+..+|..+++.....++..++..++.+++.|++|+|+++|+|
T Consensus        46 ~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlH  124 (318)
T KOG0659|consen   46 RTALREIKLLQELK-HPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILH  124 (318)
T ss_pred             HHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence            35789999999999 99999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHhC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      ||+||.|++++++   |.+||+|||+++.+.+.....   ...+-|..|.|||.+.|. .|+...|+||+||++.||+.|
T Consensus       125 RDlKPnNLLis~~---g~lKiADFGLAr~f~~p~~~~---~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr  198 (318)
T KOG0659|consen  125 RDLKPNNLLISSD---GQLKIADFGLARFFGSPNRIQ---THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR  198 (318)
T ss_pred             ccCCccceEEcCC---CcEEeecccchhccCCCCccc---ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc
Confidence            9999999999877   999999999999887654433   334789999999999876 578999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhCChh--------------------hhhcCCcHHHHHHHHHHhcCCCCCCCChHHH
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTMTPE--------------------AICEGTPPEFAEFLRYCRGLAFSEEPNYGKL  229 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  229 (257)
                      .+.|.+.++-+....+.+....+.+..++                    ..++..+.+..+++.+||..||.+|+++.|.
T Consensus       199 ~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qa  278 (318)
T KOG0659|consen  199 VPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQA  278 (318)
T ss_pred             CCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHH
Confidence            88888754434333333322221111111                    1345677889999999999999999999998


Q ss_pred             HH
Q psy2769         230 RD  231 (257)
Q Consensus       230 ~~  231 (257)
                      ++
T Consensus       279 L~  280 (318)
T KOG0659|consen  279 LK  280 (318)
T ss_pred             hc
Confidence            75

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.8e-39  Score=259.48  Aligned_cols=214  Identities=12%  Similarity=0.171  Sum_probs=175.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++..++..++||||+ +++|.+++......+++..+..++.|++.||++||+.|+
T Consensus        50 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i  128 (266)
T cd05064          50 RRGFLAEALTLGQFD-HSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGY  128 (266)
T ss_pred             HHHHHHHHHHHhcCC-CCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            346889999999997 999999999999999999999999 899999988655678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||...........  ......++..|+|||.+.+..++.++||||+|+++|++++
T Consensus       129 iH~dikp~nili~~~---~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~  203 (266)
T cd05064         129 VHKGLAAHKVLVNSD---LVCKISGFRRLQEDKSEAIY--TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS  203 (266)
T ss_pred             eeccccHhhEEEcCC---CcEEECCCcccccccccchh--cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhc
Confidence            999999999999766   88999999976543221111  1122345678999999999899999999999999999775


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                       |..||......   ..+..+...    .....+..+|..+.+++.+||+.+|++||+++++.+.|.++
T Consensus       204 ~g~~p~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         204 YGERPYWDMSGQ---DVIKAVEDG----FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CCCCCcCcCCHH---HHHHHHHCC----CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence             99999875332   222222222    11123467899999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-39  Score=263.53  Aligned_cols=202  Identities=22%  Similarity=0.268  Sum_probs=171.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++.++...++||||+ +++|.+++.. ...+++..+..++.|++.||++||+.|+
T Consensus        45 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  122 (291)
T cd05612          45 EQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSKEI  122 (291)
T ss_pred             HHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            346888999999998 999999999999999999999999 9999999984 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||+|+||+++.+   +.++|+|||++......      .....|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       123 ~H~dlkp~NIli~~~---~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~  193 (291)
T cd05612         123 VYRDLKPENILLDKE---GHIKLTDFGFAKKLRDR------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLV  193 (291)
T ss_pred             eecCCCHHHeEECCC---CCEEEEecCcchhccCC------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999765   88999999998754322      134568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-----hHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-----YGKLR  230 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~~  230 (257)
                      |..||....   .......+......     .+..+++.+.++|++||..||.+||+     +++++
T Consensus       194 g~~pf~~~~---~~~~~~~i~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l  252 (291)
T cd05612         194 GYPPFFDDN---PFGIYEKILAGKLE-----FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVK  252 (291)
T ss_pred             CCCCCCCCC---HHHHHHHHHhCCcC-----CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHh
Confidence            999998743   33333444333322     22567889999999999999999995     66655

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=5.5e-39  Score=268.19  Aligned_cols=218  Identities=17%  Similarity=0.268  Sum_probs=175.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------------------
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------------------   61 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------------------   61 (257)
                      .+.+.+|+.++..+.+||||+++++++...+..++||||+ +++|.+++....                           
T Consensus        85 ~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (374)
T cd05106          85 REALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEK  164 (374)
T ss_pred             HHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhc
Confidence            4568899999999966999999999999999999999999 999999986421                           


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceE
Q psy2769          62 ------------------------------------------KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL   99 (257)
Q Consensus        62 ------------------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nil   99 (257)
                                                                ..++...+..++.|++.||.|||+.|++||||||+||+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil  244 (374)
T cd05106         165 KYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVL  244 (374)
T ss_pred             ccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEE
Confidence                                                      24678889999999999999999999999999999999


Q ss_pred             eeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCC
Q psy2769         100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKS  178 (257)
Q Consensus       100 i~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~  178 (257)
                      ++.+   +.++|+|||++......... .......++..|+|||++.+..++.++||||||+++|+|++ |..||.....
T Consensus       245 ~~~~---~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~  320 (374)
T cd05106         245 LTDG---RVAKICDFGLARDIMNDSNY-VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV  320 (374)
T ss_pred             EeCC---CeEEEeeceeeeeccCCcce-eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc
Confidence            9765   88999999998765433211 11122335567999999988889999999999999999997 9999987533


Q ss_pred             ccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         179 DNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      ..   .+........   ....+..+|+.+.+++.+||+.||++||+++++.+.|++++
T Consensus       321 ~~---~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         321 NS---KFYKMVKRGY---QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             cH---HHHHHHHccc---CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            22   1111111111   11222457899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.2e-39  Score=267.18  Aligned_cols=202  Identities=21%  Similarity=0.219  Sum_probs=168.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|..++..+.+||+|+++++++.+.+..|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        39 ~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i  117 (321)
T cd05591          39 VDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGV  117 (321)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4457789999988877999999999999999999999999 9999988874 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++........   ......|++.|+|||++.+..++.++||||||+++|+|++
T Consensus       118 vHrDikp~Nill~~~---~~~kL~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t  191 (321)
T cd05591         118 IYRDLKLDNILLDAE---GHCKLADFGMCKEGILNGV---TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMA  191 (321)
T ss_pred             eccCCCHHHeEECCC---CCEEEeecccceecccCCc---cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhc
Confidence            999999999999766   8999999998865332211   1134568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      |..||....   ....+..+......     .+..++..+.+++.+||+.||++||++
T Consensus       192 g~~Pf~~~~---~~~~~~~i~~~~~~-----~p~~~~~~~~~ll~~~L~~dp~~R~~~  241 (321)
T cd05591         192 GQPPFEADN---EDDLFESILHDDVL-----YPVWLSKEAVSILKAFMTKNPNKRLGC  241 (321)
T ss_pred             CCCCCCCCC---HHHHHHHHHcCCCC-----CCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            999998743   33333333332221     224578999999999999999999943

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.4e-39  Score=267.12  Aligned_cols=206  Identities=17%  Similarity=0.190  Sum_probs=172.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++.++. ||||+++++++...+..|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        39 ~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i  116 (323)
T cd05571          39 VAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDV  116 (323)
T ss_pred             HHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456778999999998 999999999999999999999999 9999998874 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.......   .......|++.|+|||.+.+..++.++||||+||++|+|++
T Consensus       117 vHrDlkp~NIll~~~---~~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  190 (323)
T cd05571         117 VYRDLKLENLMLDKD---GHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC  190 (323)
T ss_pred             EeCCCCHHHEEECCC---CCEEEeeCCCCcccccCC---CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhc
Confidence            999999999999766   889999999886432221   11134568999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      |..||...   +.......+....     ...+..+++.+.++|.+||+.||++||     ++.++++
T Consensus       191 g~~Pf~~~---~~~~~~~~~~~~~-----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         191 GRLPFYNQ---DHEKLFELILMEE-----IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             CCCCCCCC---CHHHHHHHHHcCC-----CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            99999863   2233333332222     223367899999999999999999999     6777754

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.1e-39  Score=266.61  Aligned_cols=197  Identities=19%  Similarity=0.236  Sum_probs=168.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++..++..+++|||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        62 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i  139 (329)
T PTZ00263         62 VQHVAQEKSILMELS-HPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKDI  139 (329)
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            456889999999997 999999999999999999999999 9999999984 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.......      ....|++.|+|||.+.+..++.++|||||||++|+|++
T Consensus       140 vH~dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  210 (329)
T PTZ00263        140 IYRDLKPENLLLDNK---GHVKVTDFGFAKKVPDRT------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIA  210 (329)
T ss_pred             eecCCCHHHEEECCC---CCEEEeeccCceEcCCCc------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHc
Confidence            999999999999766   889999999987653321      34568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      |..||.+.   +....+..+......     .+..++..+.++|++||..||++||+
T Consensus       211 g~~pf~~~---~~~~~~~~i~~~~~~-----~p~~~~~~~~~li~~~L~~dP~~R~~  259 (329)
T PTZ00263        211 GYPPFFDD---TPFRIYEKILAGRLK-----FPNWFDGRARDLVKGLLQTDHTKRLG  259 (329)
T ss_pred             CCCCCCCC---CHHHHHHHHhcCCcC-----CCCCCCHHHHHHHHHHhhcCHHHcCC
Confidence            99999863   333333334333222     23568889999999999999999997

>KOG4721|consensus

Probab=100.00  E-value=2.5e-40  Score=272.14  Aligned_cols=207  Identities=18%  Similarity=0.287  Sum_probs=176.4

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR   91 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~   91 (257)
                      -.-+++.|.+|+ ||||+.|.|+|+....+|+||||| .|.|.++++. +..++......|..+|+.|+.|||.+.|+||
T Consensus       159 kETdIKHLRkLk-H~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHR  236 (904)
T KOG4721|consen  159 KETDIKHLRKLK-HPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHR  236 (904)
T ss_pred             hhhhHHHHHhcc-CcceeeEeeeecCCceeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhh
Confidence            345888999999 999999999999999999999999 9999999994 6789999999999999999999999999999


Q ss_pred             CCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCC
Q psy2769          92 DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKL  171 (257)
Q Consensus        92 dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~  171 (257)
                      |||.-||||..+   ..|||+|||-++.....    ...-.+.||..|||||++++.+.+.|.|||||||++|||+||+.
T Consensus       237 DLKSPNiLIs~~---d~VKIsDFGTS~e~~~~----STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~Ei  309 (904)
T KOG4721|consen  237 DLKSPNILISYD---DVVKISDFGTSKELSDK----STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEI  309 (904)
T ss_pred             ccCCCceEeecc---ceEEeccccchHhhhhh----hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCC
Confidence            999999999877   78999999998765432    12256789999999999999999999999999999999999999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         172 PWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       172 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      ||...+..-   .+.-+.....   .-.++..+|+-|.-|+++||...|.+||++.+++.-|.
T Consensus       310 PYkdVdssA---IIwGVGsNsL---~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  310 PYKDVDSSA---IIWGVGSNSL---HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             Cccccchhe---eEEeccCCcc---cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence            999864331   1111111111   22233789999999999999999999999999987654

>KOG0600|consensus

Probab=100.00  E-value=2e-39  Score=263.20  Aligned_cols=217  Identities=18%  Similarity=0.167  Sum_probs=182.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...-..+|+.+|++|. ||||+++.+..+..  +.+|+|+|||..+|.-++....-.|++.++..++.|++.||.|+|.+
T Consensus       159 ~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~  237 (560)
T KOG0600|consen  159 FPITAIREIKILRRLD-HPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR  237 (560)
T ss_pred             chHHHHHHHHHHHhcC-CCcccceeeEEEecCCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc
Confidence            3445678999999998 99999999988765  68999999999999999986566899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~  165 (257)
                      |++|||||..|||++.+   |.+||+|||++..+.......  ....+-|..|.|||++.|. .|+...|+||+|||+.|
T Consensus       238 gvlHRDIK~SNiLidn~---G~LKiaDFGLAr~y~~~~~~~--~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~E  312 (560)
T KOG0600|consen  238 GVLHRDIKGSNILIDNN---GVLKIADFGLARFYTPSGSAP--YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAE  312 (560)
T ss_pred             CeeeccccccceEEcCC---CCEEeccccceeeccCCCCcc--cccceEEeeccChHHhcCCcccccceeehhhhHHHHH
Confidence            99999999999999866   999999999999776654332  2567889999999999987 47999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCCh---------------------hhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP---------------------EAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |++|++.|.+.+..+....+.+++..+....+                     .+....+|....+|+..+|..||++|.
T Consensus       313 l~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~  392 (560)
T KOG0600|consen  313 LFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRG  392 (560)
T ss_pred             HHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccc
Confidence            99999999996554445555444433222222                     122456888999999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      |+.+.+.
T Consensus       393 tA~~aL~  399 (560)
T KOG0600|consen  393 TASSALQ  399 (560)
T ss_pred             cHHHHhc
Confidence            9988764

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-39  Score=264.77  Aligned_cols=206  Identities=20%  Similarity=0.249  Sum_probs=170.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++.++. ||||+++++++......++||||+ +++|.+++.. ...+++..+..++.|++.||.|||++|+
T Consensus        37 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  114 (312)
T cd05585          37 VTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNV  114 (312)
T ss_pred             HHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456778999999997 999999999999999999999999 9999999874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++........   ......|++.|+|||.+.+..++.++||||+|+++|+|++
T Consensus       115 ~HrDlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~t  188 (312)
T cd05585         115 IYRDLKPENILLDYQ---GHIALCDFGLCKLNMKDDD---KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLT  188 (312)
T ss_pred             EeCCCCHHHeEECCC---CcEEEEECcccccCccCCC---ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHh
Confidence            999999999999766   8899999999865322211   1134568999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||...   +..+....+....     ...+..+++.+.+++.+||..||.+||++..+.+
T Consensus       189 g~~pf~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e  243 (312)
T cd05585         189 GLPPFYDE---NVNEMYRKILQEP-----LRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQE  243 (312)
T ss_pred             CCCCcCCC---CHHHHHHHHHcCC-----CCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHH
Confidence            99999863   3333333333222     2333678999999999999999999986543333

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0605|consensus

Probab=100.00  E-value=3.9e-39  Score=263.36  Aligned_cols=229  Identities=19%  Similarity=0.238  Sum_probs=183.5

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+..++.|-.+|.... +|.|++++-.|++...+|+||||+ ||++..++.. ...++++.+..++.+++.|+..+|+.
T Consensus       183 ~Qv~hV~aERdiL~~~d-s~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~-~~~L~e~~arfYiaE~vlAI~~iH~~  260 (550)
T KOG0605|consen  183 NQVEHVRAERDILAEVD-SPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMR-KDTLTEDWARFYIAETVLAIESIHQL  260 (550)
T ss_pred             hhHHHHHHHHHHhhhcC-CCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHh-cCcCchHHHHHHHHHHHHHHHHHHHc
Confidence            45678899999999955 999999999999999999999999 9999999994 67899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCC--------------------CCCC------------------
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNC--------------------PPRI------------------  128 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~--------------------~~~~------------------  128 (257)
                      |++||||||+|+||+..   |.+||+|||++..+....                    ....                  
T Consensus       261 gyIHRDIKPdNlLiD~~---GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w  337 (550)
T KOG0605|consen  261 GYIHRDIKPDNLLIDAK---GHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTW  337 (550)
T ss_pred             CcccccCChhheeecCC---CCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHH
Confidence            99999999999999877   999999999985433210                    0000                  


Q ss_pred             ------CccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhc
Q psy2769         129 ------RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICE  202 (257)
Q Consensus       129 ------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (257)
                            -....+|||.|+|||++.+.+++..+|.||||||+|||+.|.+||.+-+   ..+...++...+.....+.. .
T Consensus       338 ~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~t---p~~T~rkI~nwr~~l~fP~~-~  413 (550)
T KOG0605|consen  338 KRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSET---PQETYRKIVNWRETLKFPEE-V  413 (550)
T ss_pred             HhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHHHhhhccCCCc-C
Confidence                  0113479999999999999999999999999999999999999999854   44444555555433322222 4


Q ss_pred             CCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCCCCcccccc
Q psy2769         203 GTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLL  254 (257)
Q Consensus       203 ~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  254 (257)
                      .++++..|+|.+|+. ||++|.-..    .++++..    ..+-...||+.|
T Consensus       414 ~~s~eA~DLI~rll~-d~~~RLG~~----G~~EIK~----HPfF~~v~W~~l  456 (550)
T KOG0605|consen  414 DLSDEAKDLITRLLC-DPENRLGSK----GAEEIKK----HPFFKGVDWDHL  456 (550)
T ss_pred             cccHHHHHHHHHHhc-CHHHhcCcc----cHHHHhc----CCccccCCcchh
Confidence            677999999999998 999998622    2222222    346677888765

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.9e-39  Score=266.53  Aligned_cols=203  Identities=20%  Similarity=0.260  Sum_probs=171.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++......|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        75 ~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i  152 (340)
T PTZ00426         75 VDHVFSERKILNYIN-HPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLIFEYLQSLNI  152 (340)
T ss_pred             HHHHHHHHHHHHhCC-CCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            456788999999998 999999999999999999999999 9999999984 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++......      .....|++.|+|||++.+..++.++|+||+||++|+|++
T Consensus       153 vHrDLkp~NILl~~~---~~ikL~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~  223 (340)
T PTZ00426        153 VYRDLKPENLLLDKD---GFIKMTDFGFAKVVDTR------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILV  223 (340)
T ss_pred             EccCCCHHHEEECCC---CCEEEecCCCCeecCCC------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhc
Confidence            999999999999766   89999999998765322      144578999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      |..||....   ....+..+.....     ..+..+++.+.+++++||+.||++|+     +++++++
T Consensus       224 G~~Pf~~~~---~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        224 GCPPFYANE---PLLIYQKILEGII-----YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             CCCCCCCCC---HHHHHHHHhcCCC-----CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            999998743   3333333333322     22366889999999999999999996     6666643

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.2e-38  Score=266.28  Aligned_cols=217  Identities=15%  Similarity=0.193  Sum_probs=174.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------------------
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------------------   61 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------------------   61 (257)
                      .+.+.+|+.++..+.+||||+++++++...+..++||||+ +|+|.+++....                           
T Consensus        82 ~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (375)
T cd05104          82 REALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMS  161 (375)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhccc
Confidence            4568899999999966999999999999999999999999 999999987421                           


Q ss_pred             -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q psy2769          62 -----------------------------------------------KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIK   94 (257)
Q Consensus        62 -----------------------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~   94 (257)
                                                                     ..++...+..++.|++.||.|||+.|++|+|||
T Consensus       162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk  241 (375)
T cd05104         162 CDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLA  241 (375)
T ss_pred             chhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCc
Confidence                                                           146778899999999999999999999999999


Q ss_pred             CCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-CCCCC
Q psy2769          95 PDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-GKLPW  173 (257)
Q Consensus        95 ~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-g~~p~  173 (257)
                      |+||+++.+   +.++|+|||++.......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||
T Consensus       242 p~Nill~~~---~~~kl~DfG~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~  317 (375)
T cd05104         242 ARNILLTHG---RITKICDFGLARDIRNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPY  317 (375)
T ss_pred             hhhEEEECC---CcEEEecCccceeccCccccc-ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCC
Confidence            999999765   789999999987654332111 1122345567999999999899999999999999999998 89999


Q ss_pred             CCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         174 QSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      ........  ....+....    ....+...|.++.+++..||+.||++||++.++++.|++.
T Consensus       318 ~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         318 PGMPVDSK--FYKMIKEGY----RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CCCCchHH--HHHHHHhCc----cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            87543221  112222111    1112245678999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.1e-38  Score=257.02  Aligned_cols=214  Identities=19%  Similarity=0.260  Sum_probs=176.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.++.++. ||||+++++++......++++||+ +++|.+++....               ..++...+..++
T Consensus        52 ~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  130 (283)
T cd05048          52 QQEFRQEAELMSDLQ-HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIA  130 (283)
T ss_pred             HHHHHHHHHHHHhcC-CcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHH
Confidence            356889999999998 999999999999888999999999 999999997531               457888999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.+||+.|++|+||||+||+++.+   +.++|+|||++.......... ......+++.|+|||.+.+..++.+
T Consensus       131 ~~l~~al~~lH~~~i~H~dlkp~Nil~~~~---~~~~L~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  206 (283)
T cd05048         131 IQIAAGMEYLSSHHFVHRDLAARNCLVGEG---LTVKISDFGLSRDIYSADYYR-VQSKSLLPVRWMPPEAILYGKFTTE  206 (283)
T ss_pred             HHHHHHHHHHHhCCeeccccccceEEEcCC---CcEEECCCcceeecccccccc-ccCCCcccccccCHHHhccCcCchh
Confidence            999999999999999999999999999766   889999999987543322111 1133456788999999988889999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|+|++ |..||.+....+   ....+...    .....+..+|+++.+++.+||+.||++||++.++.+.
T Consensus       207 sDv~slG~il~el~~~g~~p~~~~~~~~---~~~~i~~~----~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         207 SDIWSFGVVLWEIFSYGLQPYYGFSNQE---VIEMIRSR----QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHHcC----CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999998 999998754322   22222221    2222346789999999999999999999999999999


Q ss_pred             HHH
Q psy2769         233 FRN  235 (257)
Q Consensus       233 l~~  235 (257)
                      |++
T Consensus       280 l~~  282 (283)
T cd05048         280 LRS  282 (283)
T ss_pred             Hhc
Confidence            875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0660|consensus

Probab=100.00  E-value=2.5e-39  Score=253.35  Aligned_cols=225  Identities=15%  Similarity=0.155  Sum_probs=182.9

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeee-----CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTS-----GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ...++..+|+.+++.++ |+||+.+++.+..     -.-+|+|+|+|+.+|..+++. ++.++.+.+..+++|++.||.|
T Consensus        63 ~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~-~~~L~d~H~q~f~YQiLrgLKy  140 (359)
T KOG0660|consen   63 IDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKS-QQDLTDDHAQYFLYQILRGLKY  140 (359)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCcceEEeecccccccccceeEEehhHHhhHHHHHHHc-CccccHHHHHHHHHHHHHhcch
Confidence            34568899999999999 9999999998865     235899999999999999994 5559999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-CCCCCCcchHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDDLEALCY  161 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~Dv~slg~  161 (257)
                      +|+.+++|||+||.|++++.+   ..+||+|||+++..... ........++.|..|.|||++. ...|+...||||+||
T Consensus       141 iHSAnViHRDLKPsNll~n~~---c~lKI~DFGLAR~~~~~-~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGC  216 (359)
T KOG0660|consen  141 IHSANVIHRDLKPSNLLLNAD---CDLKICDFGLARYLDKF-FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGC  216 (359)
T ss_pred             hhcccccccccchhheeeccC---CCEEeccccceeecccc-CcccchhcceeeeeecCHHHHhccccccchhhhhhhhH
Confidence            999999999999999999887   88999999999887654 3333346789999999999885 447899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHH------------HHHH---------HH--HhhCChhhhhcCCcHHHHHHHHHHhcC
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRM------------QRVT---------EM--KLTMTPEAICEGTPPEFAEFLRYCRGL  218 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~------------~~~~---------~~--~~~~~~~~~~~~~~~~~~~li~~~l~~  218 (257)
                      |+.||++|++.|.+.+..+....+            ..+.         ..  ....+....+++.++...+|+.+||..
T Consensus       217 I~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~f  296 (359)
T KOG0660|consen  217 ILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVF  296 (359)
T ss_pred             HHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhcc
Confidence            999999999999985443321111            1111         00  111223455678899999999999999


Q ss_pred             CCCCCCChHHHHH--HHHHHHH
Q psy2769         219 AFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       219 ~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      ||.+|+|+++.++  .|..+-.
T Consensus       297 dP~kRita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  297 DPKKRITAEEALAHPYLAPYHD  318 (359)
T ss_pred             CccccCCHHHHhcChhhhhhcC
Confidence            9999999999876  5555544

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.4e-38  Score=273.43  Aligned_cols=209  Identities=20%  Similarity=0.202  Sum_probs=173.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+|+.++..+. ||||+++++++...+..|+||||+ +++|.+.+...   ...+++..+..++.|++.||.++|++
T Consensus       110 ~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~  188 (478)
T PTZ00267        110 AYARSELHCLAACD-HFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR  188 (478)
T ss_pred             HHHHHHHHHHHhCC-CCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            45778999999998 999999999999999999999999 99999988643   34689999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.++|+|||++.......... ......||+.|+|||++.+..++.++|||||||++|+|
T Consensus       189 ~ivHrDlkp~NIll~~~---~~~kL~DFgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el  264 (478)
T PTZ00267        189 KMMHRDLKSANIFLMPT---GIIKLGDFGFSKQYSDSVSLD-VASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYEL  264 (478)
T ss_pred             CEEECCcCHHhEEECCC---CcEEEEeCcCceecCCccccc-cccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHH
Confidence            99999999999999866   889999999998764432211 12455689999999999998899999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   ....+..+..+..    ...+..+++.+.++|..||..+|++||++++++.
T Consensus       265 ~tg~~Pf~~~~---~~~~~~~~~~~~~----~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        265 LTLHRPFKGPS---QREIMQQVLYGKY----DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HhCCCCCCCCC---HHHHHHHHHhCCC----CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            99999998642   2333333322221    1223568899999999999999999999998854

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=9.3e-39  Score=254.12  Aligned_cols=216  Identities=19%  Similarity=0.312  Sum_probs=174.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++.. ...++||||+ +++|.+++......+++..+..++.|++.||.+||+.|+
T Consensus        39 ~~~~~~E~~~l~~l~-h~~ii~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  116 (257)
T cd05115          39 RDEMMREAEIMHQLD-NPYIVRMIGVCEA-EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF  116 (257)
T ss_pred             HHHHHHHHHHHHhcC-CCCeEEEEEEEcC-CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence            456889999999997 9999999998864 4689999999 999999998556679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||.+.................++..|+|||.+.+..++.++||||||+++|++++
T Consensus       117 ~H~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~  193 (257)
T cd05115         117 VHRDLAARNVLLVNQ---HYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFS  193 (257)
T ss_pred             eecccchheEEEcCC---CcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhc
Confidence            999999999999766   88999999998754333211111112223568999999988888999999999999999996


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                       |..||......+   ....+..+.    .......+++++.+++.+||..+|++||++.++.+.|+.+.
T Consensus       194 ~g~~p~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~  256 (257)
T cd05115         194 YGQKPYKKMKGPE---VMSFIEQGK----RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY  256 (257)
T ss_pred             CCCCCcCcCCHHH---HHHHHHCCC----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence             999998754322   222222221    12233678899999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2e-38  Score=256.11  Aligned_cols=214  Identities=15%  Similarity=0.155  Sum_probs=169.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+.+.+|+.++..++ ||||+++++++..++..++||||+.+++.+.+......+++..+..++.|++.||.+||+.|+
T Consensus        43 ~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  121 (287)
T cd07848          43 VKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI  121 (287)
T ss_pred             chhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3456889999999998 999999999999999999999999444555555445679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.........  ......+++.|+|||++.+..++.++|+||+|+++|+|++
T Consensus       122 ~H~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~  196 (287)
T cd07848         122 VHRDIKPENLLISHN---DVLKLCDFGFARNLSEGSNA--NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSD  196 (287)
T ss_pred             ecCCCCHHHEEEcCC---CcEEEeeccCcccccccccc--cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHh
Confidence            999999999999766   88999999998765432211  1134568899999999998889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCCh---------------------------hhhhcCCcHHHHHHHHHHhcCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTP---------------------------EAICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      |+.||......+....+..   ...+.+.                           ......+|..+.+++++||+.||+
T Consensus       197 g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~  273 (287)
T cd07848         197 GQPLFPGESEIDQLFTIQK---VLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPT  273 (287)
T ss_pred             CCCCCCCCCHHHHHHHHHH---hhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcc
Confidence            9999987543222211111   1100000                           011124788899999999999999


Q ss_pred             CCCChHHHHH
Q psy2769         222 EEPNYGKLRD  231 (257)
Q Consensus       222 ~Rp~~~~~~~  231 (257)
                      +|||++++++
T Consensus       274 ~R~s~~~~l~  283 (287)
T cd07848         274 DRYLTEQCLN  283 (287)
T ss_pred             cCCCHHHHhc
Confidence            9999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=3.7e-38  Score=256.48  Aligned_cols=212  Identities=16%  Similarity=0.143  Sum_probs=167.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      ..+.+|+.+++.+. ||||+++++++.+....++||||++++|.+.+......+++..+..++.|++.||.|||+.|++|
T Consensus        48 ~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH  126 (303)
T cd07869          48 FTAIREASLLKGLK-HANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILH  126 (303)
T ss_pred             hhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            45788999999998 99999999999999999999999988999888865667999999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHhC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      +||||+||+++.+   +.++|+|||++........   ......+++.|+|||++.+. .++.++||||+|+++|+|++|
T Consensus       127 ~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g  200 (303)
T cd07869         127 RDLKPQNLLISDT---GELKLADFGLARAKSVPSH---TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQG  200 (303)
T ss_pred             CCCCHHHEEECCC---CCEEECCCCcceeccCCCc---cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence            9999999999765   8899999999865432211   11345678999999998764 478899999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhC--------------C--------h---hhh--hcCCcHHHHHHHHHHhcCCCCC
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTM--------------T--------P---EAI--CEGTPPEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~--------------~--------~---~~~--~~~~~~~~~~li~~~l~~~p~~  222 (257)
                      ..||.+..+.  ...+..+.......              .        +   ...  ...+++.+.+++.+||..||++
T Consensus       201 ~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~  278 (303)
T cd07869         201 VAAFPGMKDI--QDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKN  278 (303)
T ss_pred             CCCCCCCccH--HHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchh
Confidence            9999875332  22222221110000              0        0   000  0124577899999999999999


Q ss_pred             CCChHHHHH
Q psy2769         223 EPNYGKLRD  231 (257)
Q Consensus       223 Rp~~~~~~~  231 (257)
                      |||+.++++
T Consensus       279 R~s~~~~l~  287 (303)
T cd07869         279 RLSAQAALS  287 (303)
T ss_pred             ccCHHHHhc
Confidence            999998875

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0589|consensus

Probab=100.00  E-value=3.5e-39  Score=263.03  Aligned_cols=210  Identities=18%  Similarity=0.188  Sum_probs=184.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCc-cEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDY-NILVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~-~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      .+....+|+.++++++ ||||+.+.+.|..++. .|++|+|| ||++.+.+.... ..++++.+..|+.|++.|+.|||+
T Consensus        46 ~r~~A~~E~~lis~~~-hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~  124 (426)
T KOG0589|consen   46 ERRSAIQEMDLLSKLL-HPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE  124 (426)
T ss_pred             hhHHHHHHHHHHHhcc-CCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh
Confidence            3446789999999999 9999999999998887 99999999 999999999764 679999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .+|+|||||+.||+++++   +.++|+|||+++...+..   ......+||+.|++||++.+.+|+.|+|||||||++||
T Consensus       125 ~~iLHRDlK~~Nifltk~---~~VkLgDfGlaK~l~~~~---~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yE  198 (426)
T KOG0589|consen  125 NRVLHRDLKCANIFLTKD---KKVKLGDFGLAKILNPED---SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYE  198 (426)
T ss_pred             hhhhcccchhhhhhcccc---CceeecchhhhhhcCCch---hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHH
Confidence            999999999999999987   778999999998876543   12266899999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      |++-+++|.+   .+-...+.++....    ..+.+..++.+++.+|+.|+..+|..||++.+++..
T Consensus       199 m~~lk~aF~a---~~m~~Li~ki~~~~----~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  199 MCTLKPAFKA---SNMSELILKINRGL----YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHhcccccCc---cchHHHHHHHhhcc----CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            9999999998   34445555555544    223347899999999999999999999999999874

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.5e-38  Score=262.65  Aligned_cols=217  Identities=18%  Similarity=0.222  Sum_probs=168.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-----CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..++.+|+.+++.++ ||||+++++++...     ...|+||||++++|.+++.. ...+++..+..++.|++.||.|||
T Consensus        43 ~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH  120 (338)
T cd07859          43 ATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIH  120 (338)
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHH
Confidence            346889999999998 99999999987543     24799999998899998874 557999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC--CCCCCcchHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW--LDQSPRDDLEALCYT  162 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~Dv~slg~~  162 (257)
                      +.|++|+||||+||+++.+   +.++|+|||++.................+++.|+|||++.+  ..++.++||||||++
T Consensus       121 ~~~ivH~dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvv  197 (338)
T cd07859         121 TANVFHRDLKPKNILANAD---CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCI  197 (338)
T ss_pred             HCCeecCCCCHHHeEECCC---CcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHH
Confidence            9999999999999999766   89999999998754332222112234578999999999876  567889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHH------------HHH-----------HHHhhCChhhhhcCCcHHHHHHHHHHhcCC
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQ------------RVT-----------EMKLTMTPEAICEGTPPEFAEFLRYCRGLA  219 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~------------~~~-----------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  219 (257)
                      +|+|++|+.||.+.........+.            .+.           ....+.......+.+++.+.+++.+||+.|
T Consensus       198 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  277 (338)
T cd07859         198 FAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFD  277 (338)
T ss_pred             HHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcC
Confidence            999999999997643221111100            000           000111112223467888999999999999


Q ss_pred             CCCCCChHHHHH
Q psy2769         220 FSEEPNYGKLRD  231 (257)
Q Consensus       220 p~~Rp~~~~~~~  231 (257)
                      |++||+++++++
T Consensus       278 P~~Rpt~~e~l~  289 (338)
T cd07859         278 PKDRPTAEEALA  289 (338)
T ss_pred             cccCCCHHHHhc
Confidence            999999999986

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=9.9e-39  Score=261.66  Aligned_cols=205  Identities=21%  Similarity=0.219  Sum_probs=170.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+..|..++..+.+||||+++++++...+..|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||++|
T Consensus        38 ~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~  116 (320)
T cd05590          38 DVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKG  116 (320)
T ss_pred             HHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567788899988877999999999999999999999999 9999988874 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.+   +.++|+|||++........   ......|++.|+|||.+.+..++.++||||+|+++|+|+
T Consensus       117 ivH~dlkp~NIli~~~---~~~kL~DfG~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~  190 (320)
T cd05590         117 IIYRDLKLDNVLLDHE---GHCKLADFGMCKEGIFNGK---TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEML  190 (320)
T ss_pred             eEeCCCCHHHeEECCC---CcEEEeeCCCCeecCcCCC---cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHh
Confidence            9999999999999766   8899999999865322211   113456899999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGK  228 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  228 (257)
                      +|..||....   ....+..+.....     ..+..+++.+.+++++||+.||++||++.+
T Consensus       191 ~g~~Pf~~~~---~~~~~~~i~~~~~-----~~~~~~~~~~~~li~~~L~~dP~~R~~~~~  243 (320)
T cd05590         191 CGHAPFEAEN---EDDLFEAILNDEV-----VYPTWLSQDAVDILKAFMTKNPTMRLGSLT  243 (320)
T ss_pred             hCCCCCCCCC---HHHHHHHHhcCCC-----CCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            9999998743   3333333332221     223568899999999999999999999833

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0193|consensus

Probab=100.00  E-value=1.2e-39  Score=269.67  Aligned_cols=225  Identities=20%  Similarity=0.268  Sum_probs=189.9

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      +..+.|++|+.++++.+ |.||+-++|++..... .+|+.+| |.+|+..+...+..|+..+...|+.|++.|+.|||.+
T Consensus       430 ~qlqaFKnEVa~lkkTR-H~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK  507 (678)
T KOG0193|consen  430 EQLQAFKNEVAVLKKTR-HENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK  507 (678)
T ss_pred             HHHHHHHHHHHHHhhcc-hhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh
Confidence            45779999999999999 9999999999998876 9999999 9999999998788899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC---CCCCcchHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL---DQSPRDDLEALCYTL  163 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slg~~l  163 (257)
                      +|+|+|||..||++..+   +.|||+|||++..-... ..........+...|+|||+++-.   ++++.+||||||+++
T Consensus       508 ~IIHrDLKSnNIFl~~~---~kVkIgDFGLatvk~~w-~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~  583 (678)
T KOG0193|consen  508 NIIHRDLKSNNIFLHED---LKVKIGDFGLATVKTRW-SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW  583 (678)
T ss_pred             hhhhhhccccceEEccC---CcEEEecccceeeeeee-ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHH
Confidence            99999999999999876   89999999998765444 222233566789999999999643   678999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |||++|..||.. .  ..+..+..+.++-...........++.++.+|+..||..++++||.+.+|+..|+.++...+
T Consensus       584 YELltg~lPysi-~--~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~p  658 (678)
T KOG0193|consen  584 YELLTGELPYSI-Q--NRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLP  658 (678)
T ss_pred             HHHHhCcCCcCC-C--ChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccc
Confidence            999999999994 2  23333333444422233344457899999999999999999999999999999999998654

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.5e-38  Score=260.13  Aligned_cols=206  Identities=20%  Similarity=0.222  Sum_probs=169.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|..++..+.+||||+++++++......++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        39 ~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i  117 (316)
T cd05592          39 VECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGI  117 (316)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            3455677778877767999999999999999999999999 9999998874 5579999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.......   .......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       118 vH~dlkp~Nill~~~---~~~kL~Dfg~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~  191 (316)
T cd05592         118 IYRDLKLDNVLLDKD---GHIKIADFGMCKENMNGE---GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLI  191 (316)
T ss_pred             EeCCCCHHHeEECCC---CCEEEccCcCCeECCCCC---CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHh
Confidence            999999999999766   889999999987543322   11144568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH-HHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG-KLR  230 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~~~  230 (257)
                      |..||.+..   ....+..+...     .+..+..++..+.+++.+||+.||++||++. +++
T Consensus       192 G~~Pf~~~~---~~~~~~~i~~~-----~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         192 GQSPFHGED---EDELFDSILND-----RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             CCCCCCCCC---HHHHHHHHHcC-----CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            999998743   23333333221     2223356889999999999999999999874 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0610|consensus

Probab=100.00  E-value=6.7e-39  Score=254.61  Aligned_cols=227  Identities=23%  Similarity=0.315  Sum_probs=186.0

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +...+..-|-+||+.+. ||+++.+|..|+++...|++|||| ||+|..+++.+ ++.|++..++.++.+++.||.|||-
T Consensus       119 kKl~Ra~tE~eIL~~lD-HPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm  197 (459)
T KOG0610|consen  119 KKLKRAQTEREILSLLD-HPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM  197 (459)
T ss_pred             hHHHHHHHHHHHHHhcC-CCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh
Confidence            34567888999999998 999999999999999999999999 99999999876 6789999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCC------------------------------------------
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN------------------------------------------  123 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~------------------------------------------  123 (257)
                      +||+.|||||+||++-.+   |.+.|+||.++......                                          
T Consensus       198 lGivYRDLKPENILvred---GHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~  274 (459)
T KOG0610|consen  198 LGIVYRDLKPENILVRED---GHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDE  274 (459)
T ss_pred             hceeeccCCcceeEEecC---CcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccc
Confidence            999999999999999776   99999999876422110                                          


Q ss_pred             -----------CCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHH
Q psy2769         124 -----------CPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK  192 (257)
Q Consensus       124 -----------~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  192 (257)
                                 .+...+...++||..|+|||++.|..-+...|.|+||+.+|||+.|..||.+..+   .+.+.+|....
T Consensus       275 ~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~---~~Tl~NIv~~~  351 (459)
T KOG0610|consen  275 SASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN---KETLRNIVGQP  351 (459)
T ss_pred             cccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc---hhhHHHHhcCC
Confidence                       0011222346899999999999999999999999999999999999999999544   44455555554


Q ss_pred             hhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC----hHHHHHHHHHHHHhccccCCCCCccccccc
Q psy2769         193 LTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN----YGKLRDSFRNLLENKERCEFDLRYDWTLLE  255 (257)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  255 (257)
                      ..++..   +.++..++|||+++|.+||++|..    +++|        +++   .|-+-.+|..|.
T Consensus       352 l~Fp~~---~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI--------K~H---pFF~gVnWaLir  404 (459)
T KOG0610|consen  352 LKFPEE---PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI--------KRH---PFFEGVNWALIR  404 (459)
T ss_pred             CcCCCC---CcchhHHHHHHHHHhccChhhhhccccchHHh--------hcC---ccccCCChhhee
Confidence            444332   367788999999999999999997    4444        233   366777887653

>KOG0596|consensus

Probab=100.00  E-value=4.5e-39  Score=263.67  Aligned_cols=215  Identities=22%  Similarity=0.316  Sum_probs=172.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      +..+.+.+|+..|.+|++|..|++++||-..++.+|+|||+-..+|..+++.....+..-.++.+..|++.++..+|++|
T Consensus       401 qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g  480 (677)
T KOG0596|consen  401 QTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG  480 (677)
T ss_pred             HHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999999999999999999999999975544554588999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-----------CCCcchH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-----------QSPRDDL  156 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-----------~~~~~Dv  156 (257)
                      |||.||||.|+++.+    |.+||+|||++..+......... ...+||..||+||.+....           .+.++||
T Consensus       481 IVHSDLKPANFLlVk----G~LKLIDFGIA~aI~~DTTsI~k-dsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDv  555 (677)
T KOG0596|consen  481 IVHSDLKPANFLLVK----GRLKLIDFGIANAIQPDTTSIVK-DSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDV  555 (677)
T ss_pred             eeecCCCcccEEEEe----eeEEeeeechhcccCccccceee-ccccCcccccCHHHHhhccccccCCCcceeecCccch
Confidence            999999999999865    79999999999877666444333 6789999999999985442           4678999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||||||+|+|+.|+.||....  +....+..+..-.-....+..+..  .++.++++.||++||.+||++.+++.
T Consensus       556 WSLGCILYqMvYgktPf~~~~--n~~aKl~aI~~P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  556 WSLGCILYQMVYGKTPFGQII--NQIAKLHAITDPNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             hhhhhHHHHHHhcCCchHHHH--HHHHHHHhhcCCCccccccCCCCc--hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            999999999999999999752  222223333221111111111111  22899999999999999999999875

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.1e-38  Score=261.83  Aligned_cols=205  Identities=22%  Similarity=0.274  Sum_probs=171.3

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ..+.+|+.++..+. ||||+++++++..++..|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|++
T Consensus        45 ~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  122 (323)
T cd05584          45 AHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGII  122 (323)
T ss_pred             HHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEeCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            45678999999998 999999999999999999999999 9999999874 56788999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhC
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      |+||||+||+++.+   +.++|+|||++........   ......|++.|+|||.+.+..++.++||||||+++|+|++|
T Consensus       123 H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G  196 (323)
T cd05584         123 YRDLKPENILLDAQ---GHVKLTDFGLCKESIHEGT---VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTG  196 (323)
T ss_pred             cCCCCHHHeEECCC---CCEEEeeCcCCeecccCCC---cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcC
Confidence            99999999999766   8999999999865332211   11345689999999999988889999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      ..||....   ....+..+.....     ..+..+++.+.++|++||+.+|++||     +++++++
T Consensus       197 ~~pf~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         197 APPFTAEN---RKKTIDKILKGKL-----NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             CCCCCCCC---HHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            99998743   2333333333222     23367889999999999999999999     6777755

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG4717|consensus

Probab=100.00  E-value=6.5e-39  Score=261.33  Aligned_cols=208  Identities=19%  Similarity=0.268  Sum_probs=186.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ....+.+|++.++-++ ||||+++|.+..+...+|+|.|.- +|+|++++......+.++.+.+++.||+.|+.|.|+..
T Consensus        60 st~hlfqEVRCMKLVQ-HpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH  138 (864)
T KOG4717|consen   60 STGHLFQEVRCMKLVQ-HPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH  138 (864)
T ss_pred             hhhHHHHHHHHHHHhc-CcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh
Confidence            4557899999999999 999999999999888899999999 99999999988889999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l  166 (257)
                      +|||||||+|+++.  ...|.|||+|||++-.+.++    .......|...|.|||++.+..| .+..||||||||+|.|
T Consensus       139 VVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf~PG----~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyML  212 (864)
T KOG4717|consen  139 VVHRDLKPENVVFF--EKLGLVKLTDFGFSNKFQPG----KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYML  212 (864)
T ss_pred             hhcccCCcceeEEe--eecCceEeeeccccccCCCc----chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHH
Confidence            99999999999887  45589999999998777554    34477889999999999999988 4689999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|++||...++   .+.+..|..+++..+     ..++.++++||..||..||.+|.+.++|..
T Consensus       213 VCGq~PFqeAND---SETLTmImDCKYtvP-----shvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  213 VCGQPPFQEAND---SETLTMIMDCKYTVP-----SHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             HhCCCccccccc---hhhhhhhhcccccCc-----hhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            999999998544   445566777777766     778999999999999999999999999864

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.7e-38  Score=253.36  Aligned_cols=215  Identities=20%  Similarity=0.348  Sum_probs=176.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+|+.++..+. ||+|+++++++..+...+++|||+ +++|.+++... ...++...+..++.|++.||++||+.|
T Consensus        46 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  124 (263)
T cd05052          46 VEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN  124 (263)
T ss_pred             HHHHHHHHHHHHhCC-CCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999998 999999999999989999999999 99999998754 346889999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+..........  ......+..|+|||.+.+..++.++||||||+++|+|+
T Consensus       125 i~H~dlkp~nil~~~~---~~~kl~df~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~  199 (263)
T cd05052         125 FIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTA--HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA  199 (263)
T ss_pred             EeecccCcceEEEcCC---CcEEeCCCccccccccceeec--cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHH
Confidence            9999999999999766   889999999987654322111  12223456799999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      + |..||.+....   +....+..    ......+..+|..+.+++.+||..+|++||++.++.+.|++++
T Consensus       200 t~g~~p~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  263 (263)
T cd05052         200 TYGMSPYPGIDLS---QVYELLEK----GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF  263 (263)
T ss_pred             cCCCCCCCCCCHH---HHHHHHHC----CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence            8 99999864322   22222221    1122334678999999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=8.3e-39  Score=262.86  Aligned_cols=206  Identities=19%  Similarity=0.215  Sum_probs=169.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++.+||+|+++++++......|+||||+ +++|.+.+.. .+.+++..+..++.|++.||.|||++|+
T Consensus        39 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i  117 (327)
T cd05617          39 IDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHERGI  117 (327)
T ss_pred             HHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4567889999999987999999999999999999999999 9999988874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.......   .......|++.|+|||++.+..++.++||||||+++|+|++
T Consensus       118 vHrDlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~  191 (327)
T cd05617         118 IYRDLKLDNVLLDAD---GHIKLTDYGMCKEGLGPG---DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMA  191 (327)
T ss_pred             eccCCCHHHEEEeCC---CCEEEeccccceeccCCC---CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHh
Confidence            999999999999876   889999999886432211   11134578999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCcc----HHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         169 GKLPWQSIKSDN----EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       169 g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      |..||.......    .......+..     .....+..++..+.+++.+||+.||++|+++.
T Consensus       192 g~~pf~~~~~~~~~~~~~~~~~~~~~-----~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~  249 (327)
T cd05617         192 GRSPFDIITDNPDMNTEDYLFQVILE-----KPIRIPRFLSVKASHVLKGFLNKDPKERLGCQ  249 (327)
T ss_pred             CCCCCCccCCCcccccHHHHHHHHHh-----CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence            999997543221    1112222221     12223467889999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=8.9e-39  Score=262.73  Aligned_cols=207  Identities=17%  Similarity=0.182  Sum_probs=171.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ....+.+|+.+++.+. ||||+++++++...+..++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||++|
T Consensus        38 ~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~  115 (328)
T cd05593          38 EVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGK  115 (328)
T ss_pred             HHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456788999999998 999999999999999999999999 9999888874 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++.......   .......|++.|+|||.+.+..++.++|||||||++|+|+
T Consensus       116 ivHrDikp~NIll~~~---~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell  189 (328)
T cd05593         116 IVYRDLKLENLMLDKD---GHIKITDFGLCKEGITDA---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM  189 (328)
T ss_pred             eEecccCHHHeEECCC---CcEEEecCcCCccCCCcc---cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHh
Confidence            9999999999999766   889999999986432211   1113456899999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      +|..||.....   ......+...     ....+..+++.+.++|++||..||++||     ++.++++
T Consensus       190 tG~~Pf~~~~~---~~~~~~~~~~-----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         190 CGRLPFYNQDH---EKLFELILME-----DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             hCCCCCCCCCH---HHHHHHhccC-----CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence            99999986432   2222222221     1223367899999999999999999997     7887764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=7e-39  Score=262.89  Aligned_cols=206  Identities=18%  Similarity=0.208  Sum_probs=170.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++...+..|+||||+ +++|...+.. ...+++..+..++.|++.||.|||++|+
T Consensus        39 ~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i  116 (323)
T cd05595          39 VAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDV  116 (323)
T ss_pred             HHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345678999999998 999999999999999999999999 9999888874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.......   .......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       117 vH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~  190 (323)
T cd05595         117 VYRDIKLENLMLDKD---GHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC  190 (323)
T ss_pred             EecCCCHHHEEEcCC---CCEEecccHHhccccCCC---CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHh
Confidence            999999999999766   889999999876432221   11134568999999999998889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      |..||....   .......+.....     ..+..+++.+.++|.+||..||++||     ++.++++
T Consensus       191 g~~Pf~~~~---~~~~~~~~~~~~~-----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         191 GRLPFYNQD---HERLFELILMEEI-----RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             CCCCCCCCC---HHHHHHHHhcCCC-----CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            999998643   2222222222221     22367899999999999999999998     6777654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=2.3e-38  Score=255.52  Aligned_cols=209  Identities=21%  Similarity=0.252  Sum_probs=170.7

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+.+|+.++.++. |++|+++++++.+++..++++||+ +++|.+.+... ...+++..+..++.|++.||.|||+.|+
T Consensus        45 ~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05631          45 AMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERI  123 (285)
T ss_pred             HHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            45788999999998 999999999999999999999999 99998887643 3468999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.......    ......|+..|+|||.+.+..++.++||||+||++|+|++
T Consensus       124 iH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~  196 (285)
T cd05631         124 VYRDLKPENILLDDR---GHIRISDLGLAVQIPEGE----TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQ  196 (285)
T ss_pred             EeCCCCHHHEEECCC---CCEEEeeCCCcEEcCCCC----eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHh
Confidence            999999999999765   889999999987653321    1134568999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-----hHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-----YGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~~~  231 (257)
                      |..||...........+....    ..........+++.+.+++++||+.||.+||+     ++++++
T Consensus       197 g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         197 GQSPFRKRKERVKREEVDRRV----KEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             CCCCCCCCCcchhHHHHHHHh----hcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            999998754432222221111    11222333568999999999999999999997     555543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=2.1e-38  Score=252.10  Aligned_cols=215  Identities=19%  Similarity=0.306  Sum_probs=174.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++.. ...+++|||+ +++|.+++.. ...+++..+..++.|++.||.++|+.|+
T Consensus        40 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i  116 (257)
T cd05116          40 KDELLREANVMQQLD-NPYIVRMIGICEA-ESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNF  116 (257)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEcC-CCcEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            457889999999997 9999999998864 4578999999 8999999874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.................++..|+|||.+.+..++.++|+||||+++|+|++
T Consensus       117 ~H~dlkp~nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t  193 (257)
T cd05116         117 VHRDLAARNVLLVTQ---HYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFS  193 (257)
T ss_pred             eecccchhhEEEcCC---CeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHh
Confidence            999999999999865   88999999998765443221111122234578999999988888999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                       |..||.....   ......+....    ....+..+|+.+.++|.+||+.||++||++++|...|+++.
T Consensus       194 ~g~~p~~~~~~---~~~~~~i~~~~----~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~~  256 (257)
T cd05116         194 YGQKPYKGMKG---NEVTQMIESGE----RMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNYY  256 (257)
T ss_pred             CCCCCCCCCCH---HHHHHHHHCCC----CCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhccc
Confidence             9999987433   22223332221    22233678999999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=7.7e-39  Score=263.26  Aligned_cols=205  Identities=17%  Similarity=0.201  Sum_probs=167.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+..|..++..+.+||||+++++++......|+||||+ +++|.+.+.. .+.+++..+..++.|++.||.|||++|+
T Consensus        39 ~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i  117 (329)
T cd05588          39 IDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGI  117 (329)
T ss_pred             HHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4457889999999977999999999999999999999999 9999888874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.......   .......|++.|+|||++.+..++.++|+||+|+++|+|++
T Consensus       118 vH~dlkp~Nili~~~---~~~kL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~  191 (329)
T cd05588         118 IYRDLKLDNVLLDAE---GHIKLTDYGMCKEGIRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  191 (329)
T ss_pred             EecCCCHHHeEECCC---CCEEECcCccccccccCC---CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHH
Confidence            999999999999766   889999999886422211   11244578999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCcc-----H-HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 GKLPWQSIKSDN-----E-ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 g~~p~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      |..||......+     . ......+...     ....+..++..+.+++++||+.||.+||++
T Consensus       192 g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  250 (329)
T cd05588         192 GRSPFDIVGMSDNPDQNTEDYLFQVILEK-----QIRIPRSLSVKASSVLKGFLNKDPKERLGC  250 (329)
T ss_pred             CCCCcccccccccccccchHHHHHHHHcC-----CCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            999997432211     1 1111222221     222336788999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.7e-39  Score=258.62  Aligned_cols=212  Identities=20%  Similarity=0.347  Sum_probs=170.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|++.+.+++ ||||++++|++...+..++|+||+ +++|.+++... ...++...+..++.|++.||.|||+.+
T Consensus        45 ~~~~~~e~~~l~~l~-h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~  123 (259)
T PF07714_consen   45 EEEFLNEIQILRKLR-HPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN  123 (259)
T ss_dssp             HHHHHHHHHHHHTHS-BTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeeeeccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            578999999999996 999999999999877899999999 89999999975 568999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+++||+++.+   +.+||+|||+.......... ...........|+|||.+.+..++.++||||||+++||++
T Consensus       124 iiH~~l~~~nill~~~---~~~Kl~~f~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~  199 (259)
T PF07714_consen  124 IIHGNLSPSNILLDSN---GQVKLSDFGLSRPISEKSKY-KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEIL  199 (259)
T ss_dssp             EEEST-SGGGEEEETT---TEEEEESTTTGEETTTSSSE-EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccc---cccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999876   89999999998776322111 1123445778999999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      + |..||...   +..+....+.+..    .......+|..+.+++..||+.+|++||++.++.+.|
T Consensus       200 ~~~~~p~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  200 TLGKFPFSDY---DNEEIIEKLKQGQ----RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TTSSGTTTTS---CHHHHHHHHHTTE----ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cccccccccc---ccccccccccccc----cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            9 78998875   3333333332221    2223367899999999999999999999999998875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0032|consensus

Probab=100.00  E-value=2.2e-38  Score=260.99  Aligned_cols=213  Identities=21%  Similarity=0.270  Sum_probs=187.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++++.+||||+++++.|++....++|||+| ||.|.+.+...  .+++..+..++.|++.++.|+|+.|
T Consensus        78 ~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~g  155 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLG  155 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34689999999999999999999999999999999999999 99999999964  4999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCC-CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVREN-FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+|+||+|+++..... .+.++++|||++.....    ........||+.|+|||++...+++..+|+||+|+++|.|
T Consensus       156 vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~----~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiL  231 (382)
T KOG0032|consen  156 VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP----GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYIL  231 (382)
T ss_pred             ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC----CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHH
Confidence            999999999999987643 45899999999988765    2233677899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|.+||.+..   .......+..+...+..+.. ..++..+.++|+.|+..||..|+++.++++
T Consensus       232 L~G~~PF~~~~---~~~~~~~i~~~~~~f~~~~w-~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  232 LSGVPPFWGET---EFEIFLAILRGDFDFTSEPW-DDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             hhCCCCCcCCC---hhHHHHHHHcCCCCCCCCCc-cccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            99999999843   33334466666665554444 788999999999999999999999999987

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=4.5e-38  Score=253.11  Aligned_cols=213  Identities=18%  Similarity=0.270  Sum_probs=175.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-------------CCCCHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-------------KRFSLKTVLMLADQ   75 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-------------~~~~~~~~~~~~~~   75 (257)
                      .+.+.+|++++.++. ||||+++++++......+++|||+ +++|.+++....             ..+++..+..++.|
T Consensus        52 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  130 (280)
T cd05049          52 RKDFEREAELLTNFQ-HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ  130 (280)
T ss_pred             HHHHHHHHHHHHhcC-CCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHH
Confidence            467899999999998 999999999999999999999999 999999997531             34788899999999


Q ss_pred             HHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcch
Q psy2769          76 MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDD  155 (257)
Q Consensus        76 i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D  155 (257)
                      ++.|+.+||+.|++|+||+|+||+++.+   +.++|+|||.+.......... ......++..|+|||.+.+..++.++|
T Consensus       131 i~~~l~~lH~~~i~h~dlkp~nili~~~---~~~kl~d~g~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  206 (280)
T cd05049         131 IASGMVYLASQHFVHRDLATRNCLVGYD---LVVKIGDFGMSRDVYTTDYYR-VGGHTMLPIRWMPPESIMYRKFTTESD  206 (280)
T ss_pred             HHHHHHHHhhCCeeccccccceEEEcCC---CeEEECCcccceecccCccee-cCCCCcccceecChhhhccCCcchhhh
Confidence            9999999999999999999999999876   899999999987543321111 112334567899999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         156 LEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       156 v~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |||||+++|+|++ |..||......   .....+....    .......+|..+.+++.+||..||++||++.++++.|+
T Consensus       207 i~slG~il~e~~~~g~~p~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         207 VWSFGVVLWEIFTYGKQPWYGLSNE---EVIECITQGR----LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHHcCC----cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            9999999999998 99999874332   2223332221    11223568899999999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG0611|consensus

Probab=100.00  E-value=6e-39  Score=254.87  Aligned_cols=206  Identities=19%  Similarity=0.291  Sum_probs=178.2

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      +..-.+.+|++++..|. ||||+++|.+|+..+.+.+||||. +|.|++++.. .+.+++.++..+++||++|+.|.|++
T Consensus        95 qDlvhIRREIeIMSsLN-HPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSe-r~~LsErEaRhfFRQIvSAVhYCHkn  172 (668)
T KOG0611|consen   95 QDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDKIVIVMEYASGGELYDYISE-RGSLSEREARHFFRQIVSAVHYCHKN  172 (668)
T ss_pred             HHHHHHHHHHHHHhhcC-CCceeehhhhhcCCceEEEEEEecCCccHHHHHHH-hccccHHHHHHHHHHHHHHHHHHhhc
Confidence            34447899999999998 999999999999999999999999 9999999996 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~  165 (257)
                      +++|||||.+||+++.+   +++||.|||++-.+...    .-..++.|++.|.+||+.++.+| ++..|-||||+++|-
T Consensus       173 rVvHRDLKLENILLD~N---~NiKIADFGLSNly~~~----kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYt  245 (668)
T KOG0611|consen  173 RVVHRDLKLENILLDQN---NNIKIADFGLSNLYADK----KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYT  245 (668)
T ss_pred             cceecccchhheeecCC---CCeeeeccchhhhhccc----cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHH
Confidence            99999999999999877   89999999998665432    23367899999999999999998 789999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+.|..||++.   +....+..|..+.+..      +.-|....-||+.||..||++|.|++++..
T Consensus       246 LVyGtMPFDG~---Dhk~lvrQIs~GaYrE------P~~PSdA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  246 LVYGTMPFDGR---DHKRLVRQISRGAYRE------PETPSDASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             HhhcccccCCc---hHHHHHHHhhcccccC------CCCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence            99999999984   3333334444444332      345667889999999999999999999865

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=4.2e-38  Score=253.05  Aligned_cols=209  Identities=21%  Similarity=0.235  Sum_probs=168.7

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+..|++++.++. ||||+++++++..+.+.++||||+ +++|.+.+... ...++...+..++.|++.||.+||+.|+
T Consensus        38 ~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  116 (277)
T cd05607          38 KMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI  116 (277)
T ss_pred             HHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            34567999999997 999999999999999999999999 99998888643 3468899999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++........    .....++..|+|||.+.+..++.++|+||+||++|+|++
T Consensus       117 vH~dikp~Nili~~~---~~~~l~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~  189 (277)
T cd05607         117 VYRDMKPENVLLDDQ---GNCRLSDLGLAVELKDGKT----ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVA  189 (277)
T ss_pred             EEccCChHhEEEcCC---CCEEEeeceeeeecCCCce----eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHh
Confidence            999999999999766   8899999999876543211    133468899999999998889999999999999999999


Q ss_pred             CCCCCCCCCCccHH-HHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEE-TRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||......... ..........    .......+++.+.+++.+||+.||++||++.++.+
T Consensus       190 g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         190 GRTPFKDHKEKVAKEELKRRTLEDE----VKFEHQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             CCCCCCCCcchhhHHHHHHHhhccc----cccccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            99999864332221 1111111111    11112468899999999999999999999977653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=5.2e-38  Score=253.84  Aligned_cols=219  Identities=18%  Similarity=0.265  Sum_probs=179.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc------------CCCCHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS------------KRFSLKTVLMLADQM   76 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~------------~~~~~~~~~~~~~~i   76 (257)
                      .+.+.+|+.++.++. ||+|+++++++......++++||+ +++|.+++....            ..+++..+..++.|+
T Consensus        51 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql  129 (288)
T cd05093          51 RKDFHREAELLTNLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQI  129 (288)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHH
Confidence            446889999999998 999999999999999999999999 999999997432            248999999999999


Q ss_pred             HHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchH
Q psy2769          77 ISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL  156 (257)
Q Consensus        77 ~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv  156 (257)
                      +.||.+||+.|++|+||||+||+++.+   +.++|+|||.+.......... ......++..|+|||.+.+..++.++|+
T Consensus       130 ~~aL~~lH~~~i~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDi  205 (288)
T cd05093         130 AAGMVYLASQHFVHRDLATRNCLVGEN---LLVKIGDFGMSRDVYSTDYYR-VGGHTMLPIRWMPPESIMYRKFTTESDV  205 (288)
T ss_pred             HHHHHHHHhCCeeecccCcceEEEccC---CcEEeccCCccccccCCceee-cCCCCCccccccCHHHhccCCCCchhhH
Confidence            999999999999999999999999766   889999999987543322111 1123345678999999998888999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         157 EALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       157 ~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ||||+++++|++ |..||.....   ......+......    .....+|+.+.+++.+||+.+|.+||++.++.+.|++
T Consensus       206 wslG~il~~l~t~g~~p~~~~~~---~~~~~~i~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~  278 (288)
T cd05093         206 WSLGVVLWEIFTYGKQPWYQLSN---NEVIECITQGRVL----QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQN  278 (288)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcCCcC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence            999999999998 9999987533   2233333332211    1224678899999999999999999999999999999


Q ss_pred             HHHhc
Q psy2769         236 LLENK  240 (257)
Q Consensus       236 ~~~~~  240 (257)
                      +.+..
T Consensus       279 ~~~~~  283 (288)
T cd05093         279 LAKAS  283 (288)
T ss_pred             HHHhc
Confidence            88754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-38  Score=262.03  Aligned_cols=208  Identities=18%  Similarity=0.238  Sum_probs=173.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++......|+||||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        45 ~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i  122 (333)
T cd05600          45 VRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHELGY  122 (333)
T ss_pred             HHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            456788999999998 999999999999999999999999 9999999974 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.....      ......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       123 vH~dlkp~Nil~~~~---~~~kL~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~  193 (333)
T cd05600         123 IHRDLKPENFLIDAS---GHIKLTDFGLSKGIVT------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLC  193 (333)
T ss_pred             cccCCCHHHEEECCC---CCEEEEeCcCCccccc------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhh
Confidence            999999999999766   8899999999875433      1145578999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhh---cCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAIC---EGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.....   .+....+.........+...   ..+++.+.+++.+||..+|++||+++++++
T Consensus       194 g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~  256 (333)
T cd05600         194 GFPPFSGSTP---NETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN  256 (333)
T ss_pred             CCCCCCCCCH---HHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence            9999987433   22223332222111111111   256899999999999999999999999875

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=6.4e-38  Score=252.67  Aligned_cols=222  Identities=19%  Similarity=0.176  Sum_probs=172.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+|+.+++++. ||||+++++++...  ...+++|||+ +++|.+++..  ..+++..+..++.|++.||.+||+.
T Consensus        50 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~  126 (283)
T cd05080          50 TSGWKKEINILKTLY-HENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQ  126 (283)
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456789999999997 99999999987653  3588999999 9999999873  5699999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++.................++..|+|||.+.+...+.++||||||+++++|
T Consensus       127 ~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el  203 (283)
T cd05080         127 HYIHRDLAARNVLLDND---RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYEL  203 (283)
T ss_pred             CeeccccChheEEEcCC---CcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHH
Confidence            99999999999999766   889999999987654322111111223456679999999888889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHH--------HHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEET--------RMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      ++|..||......-...        ....................+|..+.+++.+||+.+|++||+++++++.|+++.
T Consensus       204 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         204 LTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             HhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            99999987643211000        000011100011111223567899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.4e-38  Score=260.75  Aligned_cols=211  Identities=22%  Similarity=0.270  Sum_probs=171.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|+.++..+.+||+|+++++++...+..++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  126 (332)
T cd05614          48 VEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGI  126 (332)
T ss_pred             HHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3457789999999988999999999999999999999999 9999999874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~  167 (257)
                      +||||||+||+++.+   +.++|+|||++.........  ......|++.|+|||.+.+.. ++.++||||||+++|+|+
T Consensus       127 vHrDlkp~Nili~~~---~~~kl~DfG~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  201 (332)
T cd05614         127 VYRDIKLENILLDSE---GHVVLTDFGLSKEFLSEEKE--RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELL  201 (332)
T ss_pred             EecCCCHHHeEECCC---CCEEEeeCcCCccccccCCC--ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhh
Confidence            999999999999866   89999999998764332211  113457899999999998754 688999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHH-HHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRM-QRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      +|..||...........+ ..+..     ..+..+..+++.+.+++.+||+.||++||     +++++++
T Consensus       202 tg~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         202 TGASPFTLEGERNTQSEVSRRILK-----CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             cCCCCCCCCCCCCCHHHHHHHHhc-----CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            999999764333222222 12221     12233356889999999999999999999     5556653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.4e-38  Score=258.30  Aligned_cols=202  Identities=21%  Similarity=0.238  Sum_probs=168.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+..|..++..+.+||||+++++++...+..|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        39 ~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~i  117 (318)
T cd05570          39 VECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHERGI  117 (318)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4456788899988877999999999999999999999999 9999988874 4579999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.......   .......+++.|+|||.+.+..++.++|+||+||++|+|++
T Consensus       118 vH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~  191 (318)
T cd05570         118 IYRDLKLDNVLLDSE---GHIKIADFGMCKEGILGG---VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA  191 (318)
T ss_pred             EccCCCHHHeEECCC---CcEEecccCCCeecCcCC---CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh
Confidence            999999999999766   889999999886432211   11134568999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      |..||....   .......+....     ...+..++..+.++|++||..||.+||++
T Consensus       192 G~~pf~~~~---~~~~~~~i~~~~-----~~~~~~~~~~~~~li~~~l~~dP~~R~s~  241 (318)
T cd05570         192 GQSPFEGDD---EDELFQSILEDE-----VRYPRWLSKEAKSILKSFLTKNPEKRLGC  241 (318)
T ss_pred             CCCCCCCCC---HHHHHHHHHcCC-----CCCCCcCCHHHHHHHHHHccCCHHHcCCC
Confidence            999998643   222222222221     12235688999999999999999999998

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=4.2e-38  Score=251.54  Aligned_cols=216  Identities=14%  Similarity=0.259  Sum_probs=177.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++.++. ||||+++++++...+..+++||++ +++|.+++......++...+..++.|++.|+.+||+.|+
T Consensus        49 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i  127 (266)
T cd05033          49 RLDFLTEASIMGQFD-HPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY  127 (266)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            456888999999998 999999999999999999999999 999999998655679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||.+........... .....++..|+|||.+.+..++.++||||||+++|++++
T Consensus       128 ~H~di~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~  203 (266)
T cd05033         128 VHRDLAARNILVNSN---LVCKVSDFGLSRRLEDSEATYT-TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS  203 (266)
T ss_pred             ccCCCCcceEEEcCC---CCEEECccchhhccccccccee-ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHc
Confidence            999999999999766   8899999999887642221111 122345678999999998889999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                       |..||.......   ....+....    ..+....+|+.+.+++.+||+.+|++||+++++++.|.+++
T Consensus       204 ~g~~p~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~  266 (266)
T cd05033         204 YGERPYWDMSNQD---VIKAVEDGY----RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI  266 (266)
T ss_pred             cCCCCCCCCCHHH---HHHHHHcCC----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence             999997643322   222222111    11122568899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3.3e-38  Score=259.47  Aligned_cols=205  Identities=19%  Similarity=0.214  Sum_probs=167.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|+.++.++.+||||+++++++......++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||++|+
T Consensus        39 ~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i  117 (329)
T cd05618          39 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGI  117 (329)
T ss_pred             HHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3457789999988877999999999999999999999999 9999888774 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.......   .......|++.|+|||++.+..++.++|+||||+++|+|++
T Consensus       118 vH~Dikp~Nili~~~---~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  191 (329)
T cd05618         118 IYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  191 (329)
T ss_pred             eeCCCCHHHEEECCC---CCEEEeeCCccccccCCC---CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhh
Confidence            999999999999776   889999999886432211   11244578999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcc------HHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 GKLPWQSIKSDN------EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      |..||.......      .......+..     ....++..++..+.+++++||+.||++||++
T Consensus       192 g~~Pf~~~~~~~~~~~~~~~~~~~~i~~-----~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         192 GRSPFDIVGSSDNPDQNTEDYLFQVILE-----KQIRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CCCCCccCCCcCCcccccHHHHHHHHhc-----CCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            999996422111      1111122222     1222346788999999999999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=3.8e-38  Score=251.96  Aligned_cols=216  Identities=16%  Similarity=0.265  Sum_probs=176.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++..++..+++|||+ +++|.+++......++..++..++.|++.||.+||+.|+
T Consensus        49 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  127 (267)
T cd05066          49 RRDFLSEASIMGQFD-HPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY  127 (267)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            457889999999997 999999999999999999999999 899999998655678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||.+.................++..|++||.+.+..++.++|+||||+++|++++
T Consensus       128 ~h~dlkp~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~  204 (267)
T cd05066         128 VHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS  204 (267)
T ss_pred             eehhhchhcEEECCC---CeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhc
Confidence            999999999999765   88999999998765433211111112233568999999998889999999999999999886


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                       |..||.......   ....+... .   .......+|+.+.+++.+|++.+|++||++.++++.|.++
T Consensus       205 ~g~~p~~~~~~~~---~~~~~~~~-~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         205 YGERPYWEMSNQD---VIKAIEEG-Y---RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CCCCCcccCCHHH---HHHHHhCC-C---cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence             999998754322   22222221 1   1122256789999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=3.4e-38  Score=256.02  Aligned_cols=218  Identities=16%  Similarity=0.248  Sum_probs=176.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.++.++.+||||+++++++...+..++++||+ +++|.+++....               ..++...+..++
T Consensus        46 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  125 (297)
T cd05089          46 HRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA  125 (297)
T ss_pred             HHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHH
Confidence            3568889999999966999999999999888999999999 899999997431               247889999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.+||+.|++|+||||+||+++.+   +.++|+|||++.......    .......+..|+|||.+.+..++.+
T Consensus       126 ~qi~~al~~lH~~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~  198 (297)
T cd05089         126 SDVATGMQYLSEKQFIHRDLAARNVLVGEN---LASKIADFGLSRGEEVYV----KKTMGRLPVRWMAIESLNYSVYTTK  198 (297)
T ss_pred             HHHHHHHHHHHHCCcccCcCCcceEEECCC---CeEEECCcCCCcccccee----ccCCCCcCccccCchhhccCCCCch
Confidence            999999999999999999999999999765   889999999875322110    1011223457999999988888999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|+|++ |..||......+   ....+...    .....+..++..+.+++.+||..+|.+||+++++++.
T Consensus       199 ~DvwSlG~il~el~t~g~~pf~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         199 SDVWSFGVLLWEIVSLGGTPYCGMTCAE---LYEKLPQG----YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHHhcC----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999997 999998743322   22222211    1112235688999999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |++++....
T Consensus       272 l~~~~~~~~  280 (297)
T cd05089         272 LSRMLEARK  280 (297)
T ss_pred             HHHHHHhhc
Confidence            999998665

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0604|consensus

Probab=100.00  E-value=7.5e-39  Score=244.93  Aligned_cols=217  Identities=17%  Similarity=0.150  Sum_probs=185.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+..++|+++--...+||||+.++++++.    ...+.+|||.+ ||.|++.++.+ ...|++.++..++.||..|+.||
T Consensus        98 s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~l  177 (400)
T KOG0604|consen   98 SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYL  177 (400)
T ss_pred             CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHH
Confidence            45678899988888899999999998864    34678999999 99999999975 55799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+++|.||||||+|+|....+.+..+||+|||++..-....    ...+...|+.|.|||++-...++...|+||+||++
T Consensus       178 H~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~----~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVim  253 (400)
T KOG0604|consen  178 HSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG----DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIM  253 (400)
T ss_pred             HhcchhhccCChhheeeecCCCCcceEecccccccccCCCc----cccCCcccccccCHHHhCchhcCCCCCccchhHHH
Confidence            99999999999999999988888899999999998654322    23566789999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCccH-HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNE-ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |-|++|.+||........ -.+..+|..+.+.++.++ ++.+|+..+++|+.+|..+|++|.|++++++
T Consensus       254 YIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pE-Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  254 YILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPE-WSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             HHhhcCCCcccccCCccCChhHHhHhhccCccCCChh-HhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            999999999998655432 233445666666665554 4789999999999999999999999999876

>KOG1095|consensus

Probab=100.00  E-value=7.9e-39  Score=283.19  Aligned_cols=223  Identities=16%  Similarity=0.227  Sum_probs=190.2

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh------cCCCCHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC------SKRFSLKTVLMLADQMISR   79 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~------~~~~~~~~~~~~~~~i~~~   79 (257)
                      .+....|.+|..++..+. ||||++++|++.+....++++||| ||+|..+++..      ...++..+...++.+++.|
T Consensus       736 ~~~~~~Fl~Ea~~m~~f~-HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G  814 (1025)
T KOG1095|consen  736 EQEVSDFLKEALLMSKFD-HPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKG  814 (1025)
T ss_pred             HHHHHHHHHHHHHHhcCC-CcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhh
Confidence            456778999999999999 999999999999999999999999 99999999986      5679999999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEAL  159 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~sl  159 (257)
                      +.||++++++||||..+|++++..   ..+||+|||+++.+.....-... ....-+..|||||.+....++.++|||||
T Consensus       815 ~~YLe~~~fvHRDLAaRNCLL~~~---r~VKIaDFGlArDiy~~~yyr~~-~~a~lPvkWm~PEsl~d~iFtskSDvWsF  890 (1025)
T KOG1095|consen  815 MNYLESKHFVHRDLAARNCLLDER---RVVKIADFGLARDIYDKDYYRKH-GEAMLPVKWMPPESLKDGIFTSKSDVWSF  890 (1025)
T ss_pred             hHHHHhCCCcCcchhhhheeeccc---CcEEEcccchhHhhhhchheecc-CccccceecCCHHHHhhcccccccchhhh
Confidence            999999999999999999999876   88999999999865554332222 22345679999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         160 CYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       160 g~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      ||++||+++ |..||.+..+.+....  -...++.+.     ++.||..+.+++..||+.+|++||++..|++.+.++..
T Consensus       891 GVllWEifslG~~PY~~~~n~~v~~~--~~~ggRL~~-----P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  891 GVLLWEIFSLGATPYPSRSNFEVLLD--VLEGGRLDP-----PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             HHHHHHHHhCCCCCCCCcchHHHHHH--HHhCCccCC-----CCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence            999999999 9999998655443222  222222222     27899999999999999999999999999999998887


Q ss_pred             hcc
Q psy2769         239 NKE  241 (257)
Q Consensus       239 ~~~  241 (257)
                      ...
T Consensus       964 ~~~  966 (1025)
T KOG1095|consen  964 AAL  966 (1025)
T ss_pred             hhc
Confidence            544

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=3.3e-38  Score=259.07  Aligned_cols=203  Identities=19%  Similarity=0.210  Sum_probs=168.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+..|..++..+.++++|+++++++...+..|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||++|
T Consensus        43 ~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (324)
T cd05587          43 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSKG  121 (324)
T ss_pred             HHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34567889999999986677999999999989999999999 9999998874 557899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++........   ......|++.|+|||++.+..++.++|+||+|+++|+|+
T Consensus       122 ivH~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell  195 (324)
T cd05587         122 IIYRDLKLDNVMLDAE---GHIKIADFGMCKENIFGGK---TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML  195 (324)
T ss_pred             eEecCCCHHHeEEcCC---CCEEEeecCcceecCCCCC---ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHH
Confidence            9999999999999766   8899999998764322111   113456899999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      +|+.||....   ....+..+.....     ..+..+++.+.+++.+||+.||.+|++.
T Consensus       196 tG~~pf~~~~---~~~~~~~i~~~~~-----~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         196 AGQPPFDGED---EDELFQSIMEHNV-----SYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             hCCCCCCCCC---HHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            9999998643   3333333333222     2235788999999999999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=9.9e-38  Score=261.92  Aligned_cols=219  Identities=17%  Similarity=0.195  Sum_probs=177.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------------------
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------------------   61 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------------------   61 (257)
                      .+.+.+|+.++.++..||||+++++++......|+||||+ +++|.+++....                           
T Consensus        84 ~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (400)
T cd05105          84 KQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADEST  163 (400)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccc
Confidence            4578899999999977999999999999999999999999 999999886421                           


Q ss_pred             --------------------------------------------------------------------CCCCHHHHHHHH
Q psy2769          62 --------------------------------------------------------------------KRFSLKTVLMLA   73 (257)
Q Consensus        62 --------------------------------------------------------------------~~~~~~~~~~~~   73 (257)
                                                                                          ..++...+..++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~  243 (400)
T cd05105         164 RSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFT  243 (400)
T ss_pred             cchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHH
Confidence                                                                                246778889999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.|||+.|++|+||||+||+++.+   +.++|+|||++......... .......++..|+|||.+.+..++.+
T Consensus       244 ~qi~~aL~~LH~~~ivH~dikp~Nill~~~---~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~  319 (400)
T cd05105         244 YQVARGMEFLASKNCVHRDLAARNVLLAQG---KIVKICDFGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFDNLYTTL  319 (400)
T ss_pred             HHHHHHHHHHHhCCeeCCCCChHhEEEeCC---CEEEEEeCCcceeccccccc-cccCCcCCCcceEChhhhcCCCCCch
Confidence            999999999999999999999999999866   78999999998765432211 11133456788999999998889999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|+|++ |..||........  ....+...    ........+|..+.+++.+||+.+|++||++.++.+.
T Consensus       320 ~DiwSlGvil~ellt~g~~P~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~  393 (400)
T cd05105         320 SDVWSYGILLWEIFSLGGTPYPGMIVDST--FYNKIKSG----YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDI  393 (400)
T ss_pred             hhHHHHHHHHHHHHHCCCCCCcccchhHH--HHHHHhcC----CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence            999999999999997 9999987533221  11122111    1112235788999999999999999999999999999


Q ss_pred             HHHHHH
Q psy2769         233 FRNLLE  238 (257)
Q Consensus       233 l~~~~~  238 (257)
                      |+++++
T Consensus       394 l~~l~~  399 (400)
T cd05105         394 VESLLP  399 (400)
T ss_pred             HHHHcC
Confidence            998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.2e-37  Score=252.18  Aligned_cols=218  Identities=18%  Similarity=0.249  Sum_probs=178.7

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLAD   74 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~~   74 (257)
                      +.+.+|+.++.++. ||||+++++++......++||||+ +++|.+++....               ..+++..+..++.
T Consensus        52 ~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  130 (291)
T cd05094          52 KDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS  130 (291)
T ss_pred             HHHHHHHHHHhcCC-CCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHH
Confidence            46889999999998 999999999999999999999999 999999997431               3478899999999


Q ss_pred             HHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcc
Q psy2769          75 QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRD  154 (257)
Q Consensus        75 ~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  154 (257)
                      |++.||++||++|++|+||+|+||+++.+   +.++|+|||.+........... .....++..|+|||.+.+..++.++
T Consensus       131 ~i~~al~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~dfg~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~  206 (291)
T cd05094         131 QIASGMVYLASQHFVHRDLATRNCLVGAN---LLVKIGDFGMSRDVYSTDYYRV-GGHTMLPIRWMPPESIMYRKFTTES  206 (291)
T ss_pred             HHHHHHHHHHhCCeeecccCcceEEEccC---CcEEECCCCcccccCCCceeec-CCCCCcceeecChHHhccCCCCchh
Confidence            99999999999999999999999999866   8999999999865433221111 1334567889999999988889999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         155 DLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       155 Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      ||||||+++|+|++ |..||......   ..+..+...    ........+|..+.+++.+||+.+|++||++.++.+.|
T Consensus       207 Di~slG~il~el~t~g~~p~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l  279 (291)
T cd05094         207 DVWSFGVILWEIFTYGKQPWFQLSNT---EVIECITQG----RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKIL  279 (291)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhCC----CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence            99999999999998 99999774332   222222221    12222356788999999999999999999999999999


Q ss_pred             HHHHHhc
Q psy2769         234 RNLLENK  240 (257)
Q Consensus       234 ~~~~~~~  240 (257)
                      +++.+..
T Consensus       280 ~~~~~~~  286 (291)
T cd05094         280 HALGKAT  286 (291)
T ss_pred             HHHHhhc
Confidence            9997744

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=5.4e-38  Score=249.55  Aligned_cols=211  Identities=15%  Similarity=0.218  Sum_probs=173.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++......+++|||+ +++|.+++......++...+..++.|++.||.|||+.|+
T Consensus        43 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  121 (256)
T cd05114          43 EEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF  121 (256)
T ss_pred             HHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            457889999999998 999999999999999999999999 999999988545568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||.+.........  ......++..|+|||.+.+..++.++|+||+|+++|+|++
T Consensus       122 ~H~dl~p~ni~i~~~---~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~  196 (256)
T cd05114         122 IHRDLAARNCLVSST---GVVKVSDFGMTRYVLDDEYT--SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFT  196 (256)
T ss_pred             cccccCcceEEEcCC---CeEEECCCCCccccCCCcee--ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHc
Confidence            999999999999765   88999999988654332111  1122335568999999998888999999999999999999


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                       |+.||.....   .+....+.....    ...+...+..+.+++.+||+.+|++||+++++++.|
T Consensus       197 ~g~~p~~~~~~---~~~~~~i~~~~~----~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         197 EGKMPFEKKSN---YEVVEMISRGFR----LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCCCCCCCCH---HHHHHHHHCCCC----CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence             8999987433   223333332221    112245678899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=5e-38  Score=257.06  Aligned_cols=207  Identities=20%  Similarity=0.215  Sum_probs=169.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+..|..++..+.+||+|+++++++...++.|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|
T Consensus        38 ~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~  116 (316)
T cd05620          38 DVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSKG  116 (316)
T ss_pred             hHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34456778888887767999999999999999999999999 9999998874 567899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.+   +.++|+|||++.......   .......|++.|+|||++.+..++.++||||+|+++|+|+
T Consensus       117 ivHrDlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~  190 (316)
T cd05620         117 IIYRDLKLDNVMLDRD---GHIKIADFGMCKENVFGD---NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEML  190 (316)
T ss_pred             eEecCCCHHHeEECCC---CCEEeCccCCCeecccCC---CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHH
Confidence            9999999999999766   889999999886432211   1124456899999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH-HHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG-KLR  230 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~~~  230 (257)
                      +|..||....   .......+...     .+..+..++..+.+++.+||+.||++||++. +++
T Consensus       191 ~g~~Pf~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         191 IGQSPFHGDD---EDELFESIRVD-----TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             hCCCCCCCCC---HHHHHHHHHhC-----CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            9999998643   22333322221     2223356889999999999999999999874 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=7.3e-38  Score=257.73  Aligned_cols=212  Identities=22%  Similarity=0.319  Sum_probs=169.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-K   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~   87 (257)
                      .+++.+|+.++.++. ||||+++++++..++..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+. +
T Consensus        47 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~  124 (331)
T cd06649          47 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQ  124 (331)
T ss_pred             HHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence            457899999999998 999999999999999999999999 9999999984 45689999999999999999999986 6


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++.......     .....++..|+|||++.+..++.++||||||+++|+|+
T Consensus       125 ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~  196 (331)
T cd06649         125 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELA  196 (331)
T ss_pred             EEcCCCChhhEEEcCC---CcEEEccCcccccccccc-----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHH
Confidence            9999999999999866   889999999986553321     13456899999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHH---------------------------------------HHHHHHhhCChhhh-hcCCcHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQ---------------------------------------RVTEMKLTMTPEAI-CEGTPPE  207 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~-~~~~~~~  207 (257)
                      +|+.||...........+.                                       ...........+.. ...+++.
T Consensus       197 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (331)
T cd06649         197 IGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPD  276 (331)
T ss_pred             hCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHH
Confidence            9999997533211110000                                       00000000001111 1246788


Q ss_pred             HHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         208 FAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       208 ~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.++|.+||..||++|||++++++
T Consensus       277 l~~li~~~L~~~P~~Rpt~~ell~  300 (331)
T cd06649         277 FQEFVNKCLIKNPAERADLKMLMN  300 (331)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhc
Confidence            999999999999999999999976

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=4.4e-38  Score=250.69  Aligned_cols=215  Identities=19%  Similarity=0.291  Sum_probs=176.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.+++.+. ||||+++++.+......++++|++ +++|.+++... ...++...+..++.|++.||++||+.
T Consensus        44 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~  122 (261)
T cd05072          44 SVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK  122 (261)
T ss_pred             hHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567889999999998 999999999999989999999999 99999998754 45688999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      +++|+||+|+||+++.+   +.++|+|||.+.........  ......++..|+|||.+.+..++.++|+||||+++|+|
T Consensus       123 ~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  197 (261)
T cd05072         123 NYIHRDLRAANVLVSES---LMCKIADFGLARVIEDNEYT--AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEI  197 (261)
T ss_pred             CeeccccchhhEEecCC---CcEEECCCccceecCCCcee--ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHH
Confidence            99999999999999866   88999999998765432211  11233456789999999888889999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      ++ |..||.......   ....+... .   ..+....+|..+.+++.+||+.+|++||+++++.+.|+++
T Consensus       198 ~t~g~~p~~~~~~~~---~~~~~~~~-~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         198 VTYGKIPYPGMSNSD---VMSALQRG-Y---RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HccCCCCCCCCCHHH---HHHHHHcC-C---CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            98 999998643322   22222211 1   1122256889999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.1e-39  Score=262.40  Aligned_cols=203  Identities=21%  Similarity=0.280  Sum_probs=169.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+..|+.++.++. ||||+++++++...+..|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        42 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i  119 (318)
T cd05582          42 RVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGI  119 (318)
T ss_pred             HHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            345678999999998 999999999999999999999999 9999998874 5579999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.......   .......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       120 ~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t  193 (318)
T cd05582         120 IYRDLKPENILLDEE---GHIKLTDFGLSKESIDHE---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT  193 (318)
T ss_pred             ecCCCCHHHeEECCC---CcEEEeeccCCcccCCCC---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeecc
Confidence            999999999999766   889999999886543321   11234568999999999998888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGK  228 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  228 (257)
                      |..||....   ....+..+.....     .++..+++.+.+++++||+.||++||++.+
T Consensus       194 g~~p~~~~~---~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         194 GSLPFQGKD---RKETMTMILKAKL-----GMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCCCCCCC---HHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            999998642   3333333332222     223568899999999999999999999655

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=4.1e-38  Score=256.20  Aligned_cols=218  Identities=17%  Similarity=0.254  Sum_probs=176.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      ...+.+|+.++.++.+||||+++++++..++..++++||+ +++|.+++....               ..++..++..++
T Consensus        51 ~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  130 (303)
T cd05088          51 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA  130 (303)
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH
Confidence            3467889999999966999999999999999999999999 999999997432               257889999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.+||+.|++|+||+|+||+++.+   +.++|+|||++.......    .......+..|+|||.+.+..++.+
T Consensus       131 ~qi~~al~~LH~~gi~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~  203 (303)
T cd05088         131 ADVARGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVYTTN  203 (303)
T ss_pred             HHHHHHHHHHHhCCccccccchheEEecCC---CcEEeCccccCcccchhh----hcccCCCcccccCHHHHhccCCccc
Confidence            999999999999999999999999999766   789999999875321110    1112234567999999988888999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++++|++ |..||......   +....+..   . ........+++.+.+++.+||+.+|++||++++++..
T Consensus       204 ~Di~slG~il~ellt~g~~p~~~~~~~---~~~~~~~~---~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         204 SDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLPQ---G-YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             ccchhhhhHHHHHHhcCCCCcccCChH---HHHHHHhc---C-CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999998 99999764332   22222211   1 1112224578899999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      +++++....
T Consensus       277 l~~~~~~~~  285 (303)
T cd05088         277 LNRMLEERK  285 (303)
T ss_pred             HHHHHHhhh
Confidence            999888655

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=4.4e-38  Score=250.12  Aligned_cols=211  Identities=18%  Similarity=0.238  Sum_probs=173.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++......+++|||+ +++|.+++......+++..+..++.|++.||++||+.|+
T Consensus        43 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  121 (256)
T cd05113          43 EDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF  121 (256)
T ss_pred             HHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456899999999998 999999999999888899999999 899999998655578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.........  ......++..|++||...+..++.++|+||||+++|+|++
T Consensus       122 ~H~dl~p~nili~~~---~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~  196 (256)
T cd05113         122 IHRDLAARNCLVDDQ---GCVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYS  196 (256)
T ss_pred             eccccCcceEEEcCC---CCEEECCCccceecCCCcee--ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhc
Confidence            999999999999765   88999999988755332111  1122335578999999998888999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                       |..||.......   ....+......    ......+..+.+++.+||+.+|.+||++.++++.+
T Consensus       197 ~g~~p~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         197 LGKMPYERFNNSE---TVEKVSQGLRL----YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI  255 (256)
T ss_pred             CCCCCcCcCCHHH---HHHHHhcCCCC----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence             999998754322   22233222111    12245688999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.2e-37  Score=250.68  Aligned_cols=210  Identities=22%  Similarity=0.259  Sum_probs=169.3

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      +.+..|+.+++.+. ||+|+++.+++......++||||+ +++|.+.+...   ...+++..+..++.|++.||.|||+.
T Consensus        38 ~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~  116 (280)
T cd05608          38 EGAMVEKRILAKVH-SRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR  116 (280)
T ss_pred             HHHHHHHHHHHhCC-CCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45678999999997 999999999999999999999999 99998887532   45689999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+.........   .....+++.|+|||.+.+..++.++|+||+|+++|+|
T Consensus       117 ~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el  190 (280)
T cd05608         117 RIIYRDLKPENVLLDND---GNVRISDLGLAVELKDGQSK---TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEM  190 (280)
T ss_pred             CcccCCCCHHHEEECCC---CCEEEeeCccceecCCCCcc---ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHH
Confidence            99999999999999765   88999999998765433211   1345688999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      ++|+.||............   .... .......+..+|+.+.+++.+||+.||++||     +++++++
T Consensus       191 ~~g~~pf~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         191 IAARGPFRARGEKVENKEL---KQRI-LNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HhCCCCCCCCCcchhHHHH---HHhh-cccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            9999999864332221111   1111 1112233356899999999999999999999     4555544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=5.9e-38  Score=250.90  Aligned_cols=217  Identities=14%  Similarity=0.210  Sum_probs=176.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. |||++++.+++...+..+++|||+ +++|.+++......++...+..++.|++.|+.+||+.|+
T Consensus        50 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  128 (268)
T cd05063          50 RQDFLSEASIMGQFS-HHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY  128 (268)
T ss_pred             HHHHHHHHHHHhcCC-CCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            456889999999997 999999999999999999999999 899999998655678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||++..................+..|+|||.+.+..++.++||||||+++|++++
T Consensus       129 ~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~  205 (268)
T cd05063         129 VHRDLAARNILVNSN---LECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS  205 (268)
T ss_pred             eccccchhhEEEcCC---CcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHh
Confidence            999999999999765   88999999998765433221111112223457999999988888999999999999999997


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                       |..||......   .....+...    ...+....++..+.+++.+||..+|++||++.++.+.|++++
T Consensus       206 ~g~~p~~~~~~~---~~~~~i~~~----~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~  268 (268)
T cd05063         206 FGERPYWDMSNH---EVMKAINDG----FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL  268 (268)
T ss_pred             CCCCCCCcCCHH---HHHHHHhcC----CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence             99999764332   222222211    111122467899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.7e-37  Score=252.51  Aligned_cols=217  Identities=16%  Similarity=0.216  Sum_probs=175.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++++.+||||+++++++...+..+++|||+ +++|.+++.... ..+++.++..++.|++.||.|||+.|
T Consensus        82 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~  161 (302)
T cd05055          82 REALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN  161 (302)
T ss_pred             HHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3468899999999966999999999999999999999999 899999997532 34899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++++|||.+.......... ......++..|+|||.+.+..++.++||||+|+++|+|+
T Consensus       162 ivH~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~  237 (302)
T cd05055         162 CIHRDLAARNVLLTHG---KIVKICDFGLARDIMNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIF  237 (302)
T ss_pred             eehhhhccceEEEcCC---CeEEECCCcccccccCCCcee-ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHH
Confidence            9999999999999765   789999999987554322111 112334567899999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      + |..||........   ........   .........++.+.+++.+||+.+|++||++.++++.|+++
T Consensus       238 t~g~~p~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         238 SLGSNPYPGMPVDSK---FYKLIKEG---YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             hCCCCCcCCCCchHH---HHHHHHcC---CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            8 9999987543221   11111111   11112245788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0580|consensus

Probab=100.00  E-value=6e-39  Score=238.16  Aligned_cols=206  Identities=23%  Similarity=0.290  Sum_probs=185.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      -.+++.+|+++...|+ ||||+++|++|-++...|+++||. .|+++..++.+ ..++++.....+..|++.|+.|+|..
T Consensus        65 v~~qlrREiEIqs~L~-hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k  143 (281)
T KOG0580|consen   65 VEHQLRREIEIQSHLR-HPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK  143 (281)
T ss_pred             chhhhhheeEeecccC-CccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC
Confidence            3457899999999999 999999999999999999999999 99999999855 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      +++||||||+|+|++..   +.+|++|||.+.....+     ......||..|++||...+...+...|+|++|++.||+
T Consensus       144 ~VIhRdiKpenlLlg~~---~~lkiAdfGwsV~~p~~-----kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yef  215 (281)
T KOG0580|consen  144 RVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSN-----KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEF  215 (281)
T ss_pred             CcccCCCCHHHhccCCC---CCeeccCCCceeecCCC-----CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHH
Confidence            99999999999999876   89999999998765322     22667899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.|.+||....   ..+.+.++.+....++     +.++....++|.+|+..+|.+|....++++
T Consensus       216 lvg~ppFes~~---~~etYkrI~k~~~~~p-----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  216 LVGLPPFESQS---HSETYKRIRKVDLKFP-----STISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             HhcCCchhhhh---hHHHHHHHHHccccCC-----cccChhHHHHHHHHhccCccccccHHHHhh
Confidence            99999999854   6677777877777666     789999999999999999999999998875

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.4e-37  Score=247.24  Aligned_cols=214  Identities=18%  Similarity=0.256  Sum_probs=176.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.++.++. ||||+++++.+.. ...++++|++ +++|.+.+.... ..+++..+..++.|++.||.+||+.|
T Consensus        40 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  117 (257)
T cd05040          40 MDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR  117 (257)
T ss_pred             HHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence            457889999999998 9999999999888 7899999999 999999998644 56899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.................++..|+|||.+.+..++.++||||||+++++|+
T Consensus       118 i~H~di~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~  194 (257)
T cd05040         118 FIHRDLAARNILLASD---DKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMF  194 (257)
T ss_pred             ccccccCcccEEEecC---CEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHH
Confidence            9999999999999876   8999999999877654322222212345678899999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      + |..||......   +....+...   .........+|..+.+++.+||..+|++||++.++.+.|.
T Consensus       195 t~g~~p~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         195 TYGEEPWAGLSGS---QILKKIDKE---GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             hCCCCCCCCCCHH---HHHHHHHhc---CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            8 99999864332   222222221   1112223567899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.9e-38  Score=249.77  Aligned_cols=213  Identities=15%  Similarity=0.278  Sum_probs=172.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.+++.+. ||||+++++++......++||||+ +++|.+++......+++..+..++.|++.||.|||+.|+
T Consensus        37 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  115 (252)
T cd05084          37 KAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC  115 (252)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            456899999999997 999999999999999999999999 999999997545568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+............ .....+..|+|||.+.+..++.++|+||||+++|+|++
T Consensus       116 ~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~  191 (252)
T cd05084         116 IHRDLAARNCLVTEK---NVLKISDFGMSREEEDGVYASTG-GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFS  191 (252)
T ss_pred             cccccchheEEEcCC---CcEEECccccCcccccccccccC-CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHh
Confidence            999999999999765   78999999998654322111100 11223457999999998889999999999999999997


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                       |..||.........   ..+..    .........+|..+.+++.+||..+|++||++.++.+.|+
T Consensus       192 ~~~~p~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         192 LGAVPYANLSNQQTR---EAIEQ----GVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CCCCCccccCHHHHH---HHHHc----CCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence             89999764332211   11111    1112233567899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0201|consensus

Probab=100.00  E-value=4.6e-40  Score=262.86  Aligned_cols=211  Identities=20%  Similarity=0.306  Sum_probs=181.2

Q ss_pred             CCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           6 VRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         6 ~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+...+.+.+|+.++..+. +|||.+.|+.+..+..++++|||| ||++.++++. ...+.+..+..++++++.|+.|+|
T Consensus        51 ~~deIediqqei~~Ls~~~-~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH  128 (467)
T KOG0201|consen   51 AEDEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLH  128 (467)
T ss_pred             cchhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHHHHHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhh
Confidence            3456678899999999999 899999999999999999999999 9999999994 444588999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      ..+.+|+|||+.||++..+   |.+|++|||.+..........   .+++||+.|||||++++..|+.++||||||++.+
T Consensus       129 ~~~kiHrDIKaanil~s~~---g~vkl~DfgVa~ql~~~~~rr---~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITai  202 (467)
T KOG0201|consen  129 SEKKIHRDIKAANILLSES---GDVKLADFGVAGQLTNTVKRR---KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAI  202 (467)
T ss_pred             hcceecccccccceeEecc---CcEEEEecceeeeeechhhcc---ccccccccccchhhhccccccchhhhhhhhHHHH
Confidence            9999999999999999876   899999999987765543221   6789999999999999989999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||.+|.+||..+.+...       .-.-....+|..-..+++.++++|..||..||+.||+|.++++
T Consensus       203 Ela~GePP~s~~hPmrv-------lflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  203 ELAKGEPPHSKLHPMRV-------LFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             HHhcCCCCCcccCcceE-------EEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            99999999998765221       1111122344444678999999999999999999999999875

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=3.1e-38  Score=259.31  Aligned_cols=202  Identities=20%  Similarity=0.200  Sum_probs=164.7

Q ss_pred             ccHHHHHH-HHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          12 RLFWERNF-YEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        12 ~~~~E~~~-~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+..|... +..+. ||||+++++++...+..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|++
T Consensus        41 ~~~~e~~~~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~gii  118 (325)
T cd05602          41 HIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIV  118 (325)
T ss_pred             HHHHHHHHHHHhCC-CCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            34455544 45565 999999999999999999999999 9999998874 56788999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhC
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      ||||||+||+++.+   +.++|+|||++........   ......|++.|+|||++.+..++.++||||+|+++|+|++|
T Consensus       119 HrDlkp~Nili~~~---~~~kl~DfG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g  192 (325)
T cd05602         119 YRDLKPENILLDSQ---GHIVLTDFGLCKENIEHNG---TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG  192 (325)
T ss_pred             ecCCCHHHeEECCC---CCEEEccCCCCcccccCCC---CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcC
Confidence            99999999999766   8899999999864322111   12445789999999999998999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHH
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKL  229 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  229 (257)
                      ..||...   +..+.+..+......     ..+.+++.+.+++.+||+.+|.+||++.+.
T Consensus       193 ~~pf~~~---~~~~~~~~i~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         193 LPPFYSR---NTAEMYDNILNKPLQ-----LKPNITNSARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             CCCCCCC---CHHHHHHHHHhCCcC-----CCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence            9999863   333333333332222     235789999999999999999999987653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=2.2e-38  Score=260.23  Aligned_cols=206  Identities=18%  Similarity=0.209  Sum_probs=170.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR-KK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~   87 (257)
                      ...+..|+.++..+. ||||+++++++......|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+ .|
T Consensus        39 ~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~  116 (325)
T cd05594          39 VAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKN  116 (325)
T ss_pred             HHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            456778999999998 999999999999999999999999 9999888874 5679999999999999999999997 79


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++........   ......|++.|+|||++.+..++.++||||||+++|+|+
T Consensus       117 ivHrDikp~NIll~~~---~~~kL~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~  190 (325)
T cd05594         117 VVYRDLKLENLMLDKD---GHIKITDFGLCKEGIKDGA---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM  190 (325)
T ss_pred             EEecCCCCCeEEECCC---CCEEEecCCCCeecCCCCc---ccccccCCcccCCHHHHccCCCCCccccccccceeeeec
Confidence            9999999999999766   8999999999865322211   113456899999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      +|..||....   .......+.....     ..+..+++.+.+++.+||+.||++|+     ++.++++
T Consensus       191 tG~~Pf~~~~---~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         191 CGRLPFYNQD---HEKLFELILMEEI-----RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             cCCCCCCCCC---HHHHHHHHhcCCC-----CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            9999998643   2222222222221     22356899999999999999999997     7887764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0585|consensus

Probab=100.00  E-value=1.3e-38  Score=256.74  Aligned_cols=210  Identities=21%  Similarity=0.257  Sum_probs=173.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      .+.+.+|+.++++|. ||||++++.+..+  ...+|+|+||| .|.+...-.  .+. +++.+++.++++++.||.|||.
T Consensus       152 ~ekv~~EIailKkl~-H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~--d~~els~~~Ar~ylrDvv~GLEYLH~  228 (576)
T KOG0585|consen  152 IEKVRREIAILKKLH-HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPP--DKPELSEQQARKYLRDVVLGLEYLHY  228 (576)
T ss_pred             HHHHHHHHHHHHhcC-CcCeeEEEEeecCcccCceEEEEEeccCCccccCCC--CcccccHHHHHHHHHHHHHHHHHHHh
Confidence            468999999999999 9999999999876  35799999999 776654333  444 8999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCC--CCCCCccCCCCcccccChhHhcCCC----CCCcchHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNC--PPRIRTRGLTGTARYASVNAHQWLD----QSPRDDLEAL  159 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~~aPE~~~~~~----~~~~~Dv~sl  159 (257)
                      +||+||||||+|+|++.+   |.+||+|||.+..+..+.  .........+|||.|+|||...+..    .+.+.||||+
T Consensus       229 QgiiHRDIKPsNLLl~~~---g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWal  305 (576)
T KOG0585|consen  229 QGIIHRDIKPSNLLLSSD---GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWAL  305 (576)
T ss_pred             cCeeccccchhheEEcCC---CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhh
Confidence            999999999999999876   999999999987664432  1122224568999999999997743    3678999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||++|-++.|+.||.+   ....+.+.+|......++..   +.+.+.+++||.+||.+||+.|.+..++..
T Consensus       306 GVTLYCllfG~~PF~~---~~~~~l~~KIvn~pL~fP~~---pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~  371 (576)
T KOG0585|consen  306 GVTLYCLLFGQLPFFD---DFELELFDKIVNDPLEFPEN---PEINEDLKDLIKRLLEKDPEQRITLPDIKL  371 (576)
T ss_pred             hhhHHHhhhccCCccc---chHHHHHHHHhcCcccCCCc---ccccHHHHHHHHHHhhcChhheeehhhhee
Confidence            9999999999999998   45666677777666655432   357888999999999999999999988753

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=8.6e-38  Score=256.60  Aligned_cols=200  Identities=22%  Similarity=0.229  Sum_probs=163.8

Q ss_pred             ccccHHHHHHHHHhc--CCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLH--GAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+..|..++..+.  +||||+++++++..++..|+||||+ +++|...+.  ...+++..+..++.|++.||.|||+.
T Consensus        43 ~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~  120 (324)
T cd05589          43 VESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHEN  120 (324)
T ss_pred             HHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            456777777765443  3999999999999999999999999 999988876  46799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++.......   .......|++.|+|||.+.+..++.++||||||+++|+|
T Consensus       121 ~ivHrdlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el  194 (324)
T cd05589         121 KIVYRDLKLDNLLLDTE---GFVKIADFGLCKEGMGFG---DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEM  194 (324)
T ss_pred             CeEecCCCHHHeEECCC---CcEEeCcccCCccCCCCC---CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHH
Confidence            99999999999999876   899999999876432221   112446789999999999998899999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      ++|..||....   .......+.....     ..+..+++.+.++|.+||+.||.+||+
T Consensus       195 ~~G~~pf~~~~---~~~~~~~i~~~~~-----~~p~~~~~~~~~li~~~L~~dP~~R~~  245 (324)
T cd05589         195 LVGESPFPGDD---EEEVFDSIVNDEV-----RYPRFLSREAISIMRRLLRRNPERRLG  245 (324)
T ss_pred             HhCCCCCCCCC---HHHHHHHHHhCCC-----CCCCCCCHHHHHHHHHHhhcCHhHcCC
Confidence            99999998743   2333333333222     223568999999999999999999994

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=5.2e-38  Score=257.82  Aligned_cols=201  Identities=19%  Similarity=0.217  Sum_probs=168.2

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+..|..++..+.+||+|+++++++...+..++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|++
T Consensus        45 ~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~iv  123 (323)
T cd05616          45 ECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKGII  123 (323)
T ss_pred             HHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            456778888888877899999999999999999999999 9999988874 56799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhC
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      ||||||+||+++.+   +.++|+|||++.......   .......|++.|+|||++.+..++.++|+|||||++|+|++|
T Consensus       124 HrDlkp~Nill~~~---~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg  197 (323)
T cd05616         124 YRDLKLDNVMLDSE---GHIKIADFGMCKENMWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG  197 (323)
T ss_pred             ecCCCHHHeEECCC---CcEEEccCCCceecCCCC---CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhC
Confidence            99999999999876   889999999986533221   111345689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      ..||....   .......+......     .+..+++.+.+++.+||+.+|++|++.
T Consensus       198 ~~Pf~~~~---~~~~~~~i~~~~~~-----~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         198 QAPFEGED---EDELFQSIMEHNVA-----YPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCCCCCC---HHHHHHHHHhCCCC-----CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            99998743   33333444433222     235688999999999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-37  Score=247.57  Aligned_cols=211  Identities=18%  Similarity=0.261  Sum_probs=172.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.+++.+. ||||+++++++...+..++++|++ +++|.+++......+++..+..++.|++.|+++||+.|+
T Consensus        43 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  121 (256)
T cd05059          43 EDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF  121 (256)
T ss_pred             HHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            346888999999998 999999999999989999999999 999999998655678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.........  ......++..|+|||.+.+..++.++|+||||+++|++++
T Consensus       122 ~H~dl~p~ni~i~~~---~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~  196 (256)
T cd05059         122 IHRDLAARNCLVGED---NVVKVSDFGLARYVLDDQYT--SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFS  196 (256)
T ss_pred             ccccccHhhEEECCC---CcEEECCcccceeccccccc--ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhc
Confidence            999999999999765   88999999988754332111  1112233457999999998889999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                       |..||......   +....+...    .....+..+|..+.+++.+||..+|++||++.++++.|
T Consensus       197 ~g~~p~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         197 EGKMPYERFSNS---EVVESVSAG----YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             cCCCCCCCCCHH---HHHHHHHcC----CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence             89999864332   222222211    11222356899999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.1e-38  Score=248.92  Aligned_cols=214  Identities=20%  Similarity=0.296  Sum_probs=175.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++++. ||||+++++++...+..+++||++ +++|.+++... ...++...+..++.|++.|+.+||+.|
T Consensus        45 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (261)
T cd05068          45 PKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN  123 (261)
T ss_pred             HHHHHHHHHHHHHCC-CCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999998 999999999999999999999999 99999999854 356899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||++.........  .......+..|+|||...+..++.++|+||||+++++|+
T Consensus       124 i~H~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~  198 (261)
T cd05068         124 YIHRDLAARNVLVGEN---NICKVADFGLARVIKEDIYE--AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIV  198 (261)
T ss_pred             eeeccCCcceEEEcCC---CCEEECCcceEEEccCCccc--ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999876   88999999998876532111  111222345799999999888899999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      + |+.||.+...   ......+... ..   ......++..+.+++.+|++.+|++||+++++...|+++
T Consensus       199 t~g~~p~~~~~~---~~~~~~~~~~-~~---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         199 TYGRMPYPGMTN---AEVLQQVDQG-YR---MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             hcCCCCCCCCCH---HHHHHHHHcC-CC---CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            9 9999987432   2222222221 11   112256789999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=8.3e-38  Score=252.92  Aligned_cols=218  Identities=15%  Similarity=0.230  Sum_probs=176.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-----------------------cCCCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-----------------------SKRFS   65 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-----------------------~~~~~   65 (257)
                      .+.+.+|+.++..+. ||||+++++.+...+..++++||+ +++|.+++...                       ...++
T Consensus        47 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  125 (290)
T cd05045          47 LRDLLSEFNLLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT  125 (290)
T ss_pred             HHHHHHHHHHHhhCC-CCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccC
Confidence            346888999999998 999999999999999999999999 89999998742                       13477


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh
Q psy2769          66 LKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH  145 (257)
Q Consensus        66 ~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  145 (257)
                      ...+..++.|++.||.+||+.|++|+||+|+||+++.+   +.++|+|||++........... .....++..|+|||.+
T Consensus       126 ~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~---~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~y~apE~~  201 (290)
T cd05045         126 MGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG---RKMKISDFGLSRDVYEEDSYVK-RSKGRIPVKWMAIESL  201 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCC---CcEEeccccccccccCccchhc-ccCCCCCccccCHHHH
Confidence            88999999999999999999999999999999999765   7899999999875433221111 1223356689999999


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         146 QWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       146 ~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      .+..++.++||||||+++++|++ |..||.+....   +....+.. ..   .......++..+.+++.+||+.+|++||
T Consensus       202 ~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~~-~~---~~~~~~~~~~~~~~~i~~cl~~~P~~Rp  274 (290)
T cd05045         202 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE---RLFNLLKT-GY---RMERPENCSEEMYNLMLTCWKQEPDKRP  274 (290)
T ss_pred             ccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHhC-CC---CCCCCCCCCHHHHHHHHHHccCCcccCC
Confidence            88889999999999999999998 99999764322   22222111 11   1112356889999999999999999999


Q ss_pred             ChHHHHHHHHHHHHh
Q psy2769         225 NYGKLRDSFRNLLEN  239 (257)
Q Consensus       225 ~~~~~~~~l~~~~~~  239 (257)
                      ++.++.+.|++++..
T Consensus       275 ~~~~i~~~l~~~~~~  289 (290)
T cd05045         275 TFADISKELEKMMVK  289 (290)
T ss_pred             CHHHHHHHHHHHHhc
Confidence            999999999998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.4e-37  Score=254.36  Aligned_cols=221  Identities=16%  Similarity=0.215  Sum_probs=177.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      ...+.+|+.++..+.+||||+++++++......++++||+ +++|.+++....               ..++..++..++
T Consensus        61 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  140 (314)
T cd05099          61 LADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCA  140 (314)
T ss_pred             HHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHH
Confidence            3467889999999977999999999999888999999999 999999997531               347888999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.|||++|++|+||||+||+++.+   +.++|+|||.+.......... ......++..|+|||.+.+..++.+
T Consensus       141 ~qi~~aL~~lH~~gi~H~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  216 (314)
T cd05099         141 YQVARGMEYLESRRCIHRDLAARNVLVTED---NVMKIADFGLARGVHDIDYYK-KTSNGRLPVKWMAPEALFDRVYTHQ  216 (314)
T ss_pred             HHHHHHHHHHHHCCeeeccccceeEEEcCC---CcEEEcccccccccccccccc-ccccCCCCccccCHHHHccCCcCcc
Confidence            999999999999999999999999999765   889999999987553321111 1122234467999999998888999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +|+||||+++|+|++ |..||......   .....+...    ........++..+.+++.+||+.+|++||++.++++.
T Consensus       217 ~DiwslG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~  289 (314)
T cd05099         217 SDVWSFGILMWEIFTLGGSPYPGIPVE---ELFKLLREG----HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEA  289 (314)
T ss_pred             chhhHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHcC----CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999998 89999764332   222222221    1112235678899999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |.++.....
T Consensus       290 l~~~~~~~~  298 (314)
T cd05099         290 LDKVLAAVS  298 (314)
T ss_pred             HHHHHHHhc
Confidence            999877443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=3.1e-37  Score=249.54  Aligned_cols=211  Identities=17%  Similarity=0.195  Sum_probs=168.7

Q ss_pred             cccHHHHHHHHHhc--CCCCCcEEEeeeee-----CCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLH--GAPGVPHVMGYGTS-----GDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        11 ~~~~~E~~~~~~l~--~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..+.+|+.+++.+.  .||||+++++++..     ....++++|+++++|.+++... ...+++..+..++.|++.||.|
T Consensus        46 ~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  125 (290)
T cd07862          46 LSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF  125 (290)
T ss_pred             HHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            35678888888875  49999999998752     3468999999988999998754 3458999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ||+.|++|+||||+||+++.+   +.++|+|||++......    .......+++.|+|||.+.+..++.++||||+|++
T Consensus       126 lH~~~iiH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i  198 (290)
T cd07862         126 LHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI  198 (290)
T ss_pred             HHHCCeeeCCCCHHHEEEcCC---CCEEEccccceEeccCC----cccccccccccccChHHHhCCCCCCccchHHHHHH
Confidence            999999999999999999766   88999999998765332    11144568999999999998889999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh----------------------CChhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT----------------------MTPEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      +|+|++|.+||.+....+   .+..+......                      ...+...+.+++.+.+++.+||+.||
T Consensus       199 l~el~~g~~~f~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  275 (290)
T cd07862         199 FAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP  275 (290)
T ss_pred             HHHHHcCCCCcCCCCHHH---HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCc
Confidence            999999999998754322   22222221100                      01122334678889999999999999


Q ss_pred             CCCCChHHHHH
Q psy2769         221 SEEPNYGKLRD  231 (257)
Q Consensus       221 ~~Rp~~~~~~~  231 (257)
                      ++||++.++++
T Consensus       276 ~~R~s~~~~l~  286 (290)
T cd07862         276 AKRISAYSALS  286 (290)
T ss_pred             hhcCCHHHHhc
Confidence            99999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1e-37  Score=254.54  Aligned_cols=215  Identities=18%  Similarity=0.198  Sum_probs=170.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ...+.+|+.++++++ ||||+++++++..++..++||||++++|.+++......++...+..++.|++.||.|||+.|++
T Consensus        48 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv  126 (309)
T cd07872          48 PCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVL  126 (309)
T ss_pred             chhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            346788999999998 9999999999999999999999997799998886566789999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      ||||+|+||+++.+   +.++|+|||++........   ......+++.|+|||.+.+. .++.++||||+|+++|+|++
T Consensus       127 H~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~t  200 (309)
T cd07872         127 HRDLKPQNLLINER---GELKLADFGLARAKSVPTK---TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS  200 (309)
T ss_pred             cCCCCHHHEEECCC---CCEEECccccceecCCCcc---ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence            99999999999766   8899999999865433211   11334678899999998654 57889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHH----------------hhCC------hhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMK----------------LTMT------PEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~----------------~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      |..||......+....+.+.....                ....      .......+++++.++|.+||..||.+|||+
T Consensus       201 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~  280 (309)
T cd07872         201 GRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISA  280 (309)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCH
Confidence            999998754333222222111000                0000      001123578899999999999999999999


Q ss_pred             HHHHH
Q psy2769         227 GKLRD  231 (257)
Q Consensus       227 ~~~~~  231 (257)
                      +++++
T Consensus       281 ~e~l~  285 (309)
T cd07872         281 EEAMK  285 (309)
T ss_pred             HHHhc
Confidence            99876

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0194|consensus

Probab=100.00  E-value=1.3e-38  Score=264.16  Aligned_cols=222  Identities=22%  Similarity=0.283  Sum_probs=186.7

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +.....+.+|++++..+. ||||++++|+......+++|||+| ||+|.++++..++.++..+...++.+.+.||+|||+
T Consensus       202 ~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~  280 (474)
T KOG0194|consen  202 KEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS  280 (474)
T ss_pred             HHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH
Confidence            345678999999999998 999999999999999999999999 999999999766679999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      ++++||||-.+|+|++.+   +.+||+|||++..-..   .........-+..|+|||.+....++.++||||+||++||
T Consensus       281 k~~IHRDIAARNcL~~~~---~~vKISDFGLs~~~~~---~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~E  354 (474)
T KOG0194|consen  281 KNCIHRDIAARNCLYSKK---GVVKISDFGLSRAGSQ---YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWE  354 (474)
T ss_pred             CCCcchhHhHHHheecCC---CeEEeCccccccCCcc---eeeccccccCcceecChhhhccCccccccchhheeeeEEe
Confidence            999999999999999876   6789999999764321   1111112245679999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      +++ |..||.+.....   ...++.....+...   +...|..+..++.+||..+|++||++.++.+.++.+.....
T Consensus       355 if~~g~~Py~g~~~~~---v~~kI~~~~~r~~~---~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  355 IFENGAEPYPGMKNYE---VKAKIVKNGYRMPI---PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             eeccCCCCCCCCCHHH---HHHHHHhcCccCCC---CCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            999 888999975443   33334332333222   25788899999999999999999999999999999988655

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=4.6e-38  Score=258.08  Aligned_cols=201  Identities=20%  Similarity=0.208  Sum_probs=164.4

Q ss_pred             cccHHHHHHH-HHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNFY-EKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~~-~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+..|...+ +.+. ||||+++++.+......++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        40 ~~~~~e~~~~~~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~gi  117 (323)
T cd05575          40 KHIMAERNVLLKNVK-HPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNI  117 (323)
T ss_pred             HHHHHHHHHHHhhCC-CCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3455565544 5565 999999999999999999999999 9999998874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.......   .......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       118 vH~dikp~NIll~~~---~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~  191 (323)
T cd05575         118 IYRDLKPENILLDSQ---GHVVLTDFGLCKEGIEHS---KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLY  191 (323)
T ss_pred             EeCCCCHHHeEECCC---CcEEEeccCCCcccccCC---CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhc
Confidence            999999999999766   899999999876432211   11134568999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      |..||...   +..+....+.....     ...+.+++.+.++|++||+.||++||++.
T Consensus       192 g~~pf~~~---~~~~~~~~i~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         192 GLPPFYSR---DTAEMYDNILNKPL-----RLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCCCCCCC---CHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            99999864   33333333333222     22356899999999999999999999885

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=8.6e-38  Score=255.78  Aligned_cols=219  Identities=15%  Similarity=0.202  Sum_probs=177.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+++.+|+.+++.+. ||||+++++++... ..+++++++ +|+|.+++......++...+..++.|++.||.|||+.|+
T Consensus        53 ~~~~~~e~~~l~~l~-h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  130 (316)
T cd05108          53 NKEILDEAYVMASVD-NPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL  130 (316)
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence            457889999999998 99999999998765 478999999 999999998656678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++............ .....+..|+|||.+.+..++.++||||||+++|++++
T Consensus       131 iH~dlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~-~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t  206 (316)
T cd05108         131 VHRDLAARNVLVKTP---QHVKITDFGLAKLLGADEKEYHA-EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT  206 (316)
T ss_pred             eccccchhheEecCC---CcEEEccccccccccCCCcceec-cCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHc
Confidence            999999999999766   78999999999765443221111 22234668999999999899999999999999999997


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                       |..||.+.....    +..+......   ......++..+.+++.+||..+|++||++.+++..+.++.+...
T Consensus       207 ~g~~p~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~  273 (316)
T cd05108         207 FGSKPYDGIPASE----ISSILEKGER---LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  273 (316)
T ss_pred             CCCCCCCCCCHHH----HHHHHhCCCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence             999998743222    1222221111   12225678899999999999999999999999999998887554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.9e-38  Score=262.58  Aligned_cols=215  Identities=14%  Similarity=0.150  Sum_probs=168.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.++++|. ||||+++++++......++++|+++++|.+++.. ...++...+..++.|++.||.|||+.||+
T Consensus       127 ~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~Iv  204 (391)
T PHA03212        127 RGGTATEAHILRAIN-HPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRII  204 (391)
T ss_pred             hhhhHHHHHHHHhCC-CCCCCCEeEEEEECCeeEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            356789999999998 9999999999999999999999998899888874 45789999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhC
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      ||||||+||+++.+   +.++|+|||++........  .......||+.|+|||++.+..++.++||||||+++|+|++|
T Consensus       205 HrDiKP~NIll~~~---~~vkL~DFG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg  279 (391)
T PHA03212        205 HRDIKAENIFINHP---GDVCLGDFGAACFPVDINA--NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC  279 (391)
T ss_pred             cCCCChHhEEEcCC---CCEEEEeCCcccccccccc--cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence            99999999999766   8899999999864322111  111345799999999999998899999999999999999999


Q ss_pred             CCCCCCCCCc----cHHHHHHHHHHHHh-------------------------hC-----ChhhhhcCCcHHHHHHHHHH
Q psy2769         170 KLPWQSIKSD----NEETRMQRVTEMKL-------------------------TM-----TPEAICEGTPPEFAEFLRYC  215 (257)
Q Consensus       170 ~~p~~~~~~~----~~~~~~~~~~~~~~-------------------------~~-----~~~~~~~~~~~~~~~li~~~  215 (257)
                      ..||......    +....+..+.....                         ..     ........+|.++.++|.+|
T Consensus       280 ~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~m  359 (391)
T PHA03212        280 HDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKM  359 (391)
T ss_pred             CCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHH
Confidence            9887543211    01111111111000                         00     00011124677899999999


Q ss_pred             hcCCCCCCCChHHHHH
Q psy2769         216 RGLAFSEEPNYGKLRD  231 (257)
Q Consensus       216 l~~~p~~Rp~~~~~~~  231 (257)
                      |+.||++|||++++++
T Consensus       360 L~~dP~~Rpta~elL~  375 (391)
T PHA03212        360 LAFDAHHRPSAEALLD  375 (391)
T ss_pred             hcCChhhCCCHHHHhc
Confidence            9999999999999985

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.5e-37  Score=254.15  Aligned_cols=206  Identities=21%  Similarity=0.220  Sum_probs=169.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|..++..+.+||||+++++++.+.+..++||||+ +++|.+.+.. ...+++.++..++.|++.||.|||+.|+
T Consensus        39 ~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i  117 (316)
T cd05619          39 VECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGI  117 (316)
T ss_pred             HHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3456778888887766999999999999999999999999 9999999884 4578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++........   ......|+..|+|||.+.+..++.++||||+||++|+|++
T Consensus       118 vHrdikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~  191 (316)
T cd05619         118 VYRDLKLDNILLDTD---GHIKIADFGMCKENMLGDA---KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLI  191 (316)
T ss_pred             EeCCCCHHHEEECCC---CCEEEccCCcceECCCCCC---ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHh
Confidence            999999999999866   8899999999865322211   1134568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH-HHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG-KLR  230 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~~~  230 (257)
                      |..||....   .......+....     +..+..++..+.+++.+||..||++||++. ++.
T Consensus       192 G~~pf~~~~---~~~~~~~i~~~~-----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         192 GQSPFHGHD---EEELFQSIRMDN-----PCYPRWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             CCCCCCCCC---HHHHHHHHHhCC-----CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence            999998743   223333322211     222356888999999999999999999986 553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.3e-37  Score=253.83  Aligned_cols=221  Identities=18%  Similarity=0.218  Sum_probs=178.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.++..+.+||||+++++++...+..+++|||+ +++|.+++....               ..++..++..++
T Consensus        67 ~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  146 (307)
T cd05098          67 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCA  146 (307)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH
Confidence            3468889999999967999999999999999999999999 899999998532               247888999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.|||+.|++|+||+|+||+++.+   +.++|+|||.+.......... ......++..|+|||.+.+..++.+
T Consensus       147 ~qi~~aL~~lH~~gi~H~dlkp~Nill~~~---~~~kL~dfg~a~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  222 (307)
T cd05098         147 YQVARGMEYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFDRIYTHQ  222 (307)
T ss_pred             HHHHHHHHHHHHCCcccccccHHheEEcCC---CcEEECCCcccccccccchhh-ccccCCCccceeChHHhccCCCCcH
Confidence            999999999999999999999999999766   889999999986553321111 0112234568999999998888999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +|+||||+++|+|++ |..||....   .......+...    .....+..++..+.+++.+||..+|++||++.++++.
T Consensus       223 ~DvwslG~~l~el~~~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         223 SDVWSFGVLLWEIFTLGGSPYPGVP---VEELFKLLKEG----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCcCC---HHHHHHHHHcC----CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            999999999999998 889997632   22222222211    1122335688999999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |++++....
T Consensus       296 l~~~~~~~~  304 (307)
T cd05098         296 LDRILALTS  304 (307)
T ss_pred             HHHHHHHhh
Confidence            999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.1e-37  Score=250.52  Aligned_cols=215  Identities=16%  Similarity=0.247  Sum_probs=173.2

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS------KRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ..+.+|+.+++.+. ||||+++++++......+++|||+ +++|.+++....      ..+++..+..++.|++.||.||
T Consensus        54 ~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L  132 (277)
T cd05036          54 SDFLMEALIMSKFN-HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYL  132 (277)
T ss_pred             HHHHHHHHHHHhCC-CCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            46888999999998 999999999998888899999999 999999997542      2588899999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.+++|+||+|+||+++.++....++|+|||++.......... .......+..|+|||.+.+..++.++|||||||++
T Consensus       133 H~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il  211 (277)
T cd05036         133 EENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYR-KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL  211 (277)
T ss_pred             HHCCEeecccchheEEEeccCCCcceEeccCccccccCCcccee-cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHH
Confidence            99999999999999999876444579999999987653221111 11222345689999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         164 VYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       164 ~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |+|++ |..||.......   ....+..    ......+..+|..+.+++.+||+.+|++||++.++++.|.
T Consensus       212 ~el~~~g~~pf~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         212 WEIFSLGYMPYPGRTNQE---VMEFVTG----GGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHcCCCCCCCCCCHHH---HHHHHHc----CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            99997 999998743322   2222211    1112223678899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-37  Score=251.38  Aligned_cols=221  Identities=16%  Similarity=0.233  Sum_probs=172.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-----------CCCCHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-----------KRFSLKTVLMLADQMI   77 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-----------~~~~~~~~~~~~~~i~   77 (257)
                      .+.+.+|++++.++. |||++++++++......++||||+ +++|.+++....           ..++...+..++.|++
T Consensus        61 ~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~  139 (295)
T cd05097          61 RNDFLKEIKIMSRLK-NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIA  139 (295)
T ss_pred             HHHHHHHHHHHHhCC-CCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHH
Confidence            346888999999998 999999999999999999999999 999999986431           1367888999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||+|||+.|++|+||+|+||+++.+   +.++|+|||++.......... ......++..|+|||.+.+..++.++|+|
T Consensus       140 ~al~~lH~~~i~H~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw  215 (295)
T cd05097         140 SGMKYLASLNFVHRDLATRNCLVGNH---YTIKIADFGMSRNLYSGDYYR-IQGRAVLPIRWMAWESILLGKFTTASDVW  215 (295)
T ss_pred             HHHHHHHhcCeeccccChhhEEEcCC---CcEEecccccccccccCccee-ccCcCcCceeecChhhhccCCcCchhhHH
Confidence            99999999999999999999999765   789999999987543322111 11233456789999999988899999999


Q ss_pred             HHHHHHHHHHh--CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         158 ALCYTLVYFLR--GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       158 slg~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      |||+++++|++  |..||..............................+|+.+.+++.+||+.+|++||+++++.+.|++
T Consensus       216 SlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         216 AFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             HHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence            99999999988  6778876543222211111111111111112234678999999999999999999999999988863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2e-37  Score=249.36  Aligned_cols=218  Identities=15%  Similarity=0.177  Sum_probs=175.3

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .++..|+.++.++. ||||+++++++.. ...++++|++ +++|.+++......+++..+..++.|++.||.|||+.|++
T Consensus        54 ~~~~~~~~~l~~l~-h~~iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ii  131 (279)
T cd05111          54 QEITDHMLAMGSLD-HAYIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMV  131 (279)
T ss_pred             HHHHHHHHHHhcCC-CCCcceEEEEECC-CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            45677777888887 9999999998864 4578899999 9999999986566799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-  168 (257)
                      |+||||+||+++.+   +.++|+|||.+........... .....++..|++||.+.+..++.++||||||+++||+++ 
T Consensus       132 H~dlkp~nili~~~---~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~  207 (279)
T cd05111         132 HRNLAARNILLKSD---SIVQIADFGVADLLYPDDKKYF-YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSY  207 (279)
T ss_pred             ccccCcceEEEcCC---CcEEEcCCccceeccCCCcccc-cCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcC
Confidence            99999999999765   8899999999876543321111 123446678999999998889999999999999999998 


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |..||.+......    ..+....   ........++..+.+++.+||..+|++||++.++.+.|..+.++.+
T Consensus       208 g~~p~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~  273 (279)
T cd05111         208 GAEPYAGMRPHEV----PDLLEKG---ERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPP  273 (279)
T ss_pred             CCCCCCCCCHHHH----HHHHHCC---CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCc
Confidence            9999987532221    1111111   1111224577889999999999999999999999999999887665

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-37  Score=246.95  Aligned_cols=214  Identities=19%  Similarity=0.257  Sum_probs=173.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++.. ...+++|||+ +++|.+++.. ...+++..+..++.|++.||.+||..|+
T Consensus        40 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i  116 (257)
T cd05060          40 KKEFLREASVMAQLD-HPCIVRLIGVCKG-EPLMLVMELAPLGPLLKYLKK-RREIPVSDLKELAHQVAMGMAYLESKHF  116 (257)
T ss_pred             HHHHHHHHHHHHhcC-CCCeeeEEEEEcC-CceEEEEEeCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence            456888999999997 9999999998864 4689999999 8999999985 4478999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.................++..|+|||...+..++.++|+||||+++|++++
T Consensus       117 ~H~di~p~nili~~~---~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~  193 (257)
T cd05060         117 VHRDLAARNVLLVNR---HQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS  193 (257)
T ss_pred             eccCcccceEEEcCC---CcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHc
Confidence            999999999999766   88999999998765443322211122233467999999998889999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                       |..||......   .....+...    .....+..++..+.+++.+||..+|++||++.++.+.|++.
T Consensus       194 ~g~~p~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         194 YGAKPYGEMKGA---EVIAMLESG----ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             CCCCCcccCCHH---HHHHHHHcC----CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence             99999875332   222222221    12223367889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.7e-37  Score=250.29  Aligned_cols=213  Identities=18%  Similarity=0.265  Sum_probs=173.0

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh----------------cCCCCHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC----------------SKRFSLKTVLMLA   73 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~----------------~~~~~~~~~~~~~   73 (257)
                      ..+.+|+.+++++. ||||+++++++......|++|||+ +++|.+++...                ...+++..+..++
T Consensus        52 ~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  130 (283)
T cd05090          52 GEFQQEASLMAELH-HPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIA  130 (283)
T ss_pred             HHHHHHHHHHhhCC-CCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHH
Confidence            46889999999998 999999999999988999999999 89999998632                1247888899999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.|||+.|++|+||+|+||+++.+   +.++|+|||++.......... ......++..|+|||.+.+..++.+
T Consensus       131 ~~i~~al~~lH~~~i~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  206 (283)
T cd05090         131 IQIAAGMEYLSSHFFVHKDLAARNILIGEQ---LHVKISDLGLSREIYSADYYR-VQPKSLLPIRWMPPEAIMYGKFSSD  206 (283)
T ss_pred             HHHHHHHHHHHhcCeehhccccceEEEcCC---CcEEeccccccccccCCccee-cccCCCccceecChHHhccCCCCch
Confidence            999999999999999999999999999866   789999999987654332111 1133445678999999988888999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +|+||||+++|+|++ |..||.+...   ......+..    ......+..+++.+.+++.+||+.+|++||++.++.+.
T Consensus       207 ~Dv~slG~il~el~~~g~~p~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         207 SDIWSFGVVLWEIFSFGLQPYYGFSN---QEVIEMVRK----RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             hhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHc----CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            999999999999998 9999976432   222222221    11222336789999999999999999999999999988


Q ss_pred             HHH
Q psy2769         233 FRN  235 (257)
Q Consensus       233 l~~  235 (257)
                      |+.
T Consensus       280 l~~  282 (283)
T cd05090         280 LRS  282 (283)
T ss_pred             hhc
Confidence            864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=3e-37  Score=250.36  Aligned_cols=221  Identities=16%  Similarity=0.217  Sum_probs=172.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc----------CCCCHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS----------KRFSLKTVLMLADQMIS   78 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~----------~~~~~~~~~~~~~~i~~   78 (257)
                      .+.+.+|+.++..+. ||||+++++++...+..+++|||+ +++|.+++....          ..++..++..++.|++.
T Consensus        63 ~~~~~~E~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  141 (296)
T cd05095          63 RNDFLKEIKIMSRLK-DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIAS  141 (296)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHH
Confidence            356889999999997 999999999999989999999999 899999987531          23667889999999999


Q ss_pred             HHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHH
Q psy2769          79 RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEA  158 (257)
Q Consensus        79 ~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~s  158 (257)
                      ||++||+.|++|+||||+||+++.+   +.++|+|||++.......... .......+..|++||...+..++.++|+||
T Consensus       142 al~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~DiwS  217 (296)
T cd05095         142 GMKYLSSLNFVHRDLATRNCLVGKN---YTIKIADFGMSRNLYSGDYYR-IQGRAVLPIRWMSWESILLGKFTTASDVWA  217 (296)
T ss_pred             HHHHHHHCCeecccCChheEEEcCC---CCEEeccCcccccccCCccee-ccCcCcCccccCCHHHHhcCCccchhhhhH
Confidence            9999999999999999999999765   889999999987653332111 112234467899999988888999999999


Q ss_pred             HHHHHHHHHh--CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         159 LCYTLVYFLR--GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       159 lg~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ||+++|+|++  |..||..............................+|+.+.+++.+||..||++||++.++.+.|++
T Consensus       218 lG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         218 FGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            9999999998  7788876533222111111111110011111225678999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0584|consensus

Probab=100.00  E-value=3.2e-38  Score=262.26  Aligned_cols=210  Identities=21%  Similarity=0.323  Sum_probs=180.2

Q ss_pred             CCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCC--ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769           6 VRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD--YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         6 ~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~--~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      .+...++|..|+++|+.|+ ||||+++|++..+..  .+.+|+|.+ +|+|..|+++ .++++...+..|++||+.||.|
T Consensus        81 ~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk-~~~vn~kaik~W~RQILkGL~y  158 (632)
T KOG0584|consen   81 SPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKK-HRRVNIKAIKSWCRQILKGLVY  158 (632)
T ss_pred             ChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCceeeeeeecccCCcHHHHHHH-hccCCHHHHHHHHHHHHHHhhh
Confidence            3455689999999999999 999999999887654  488999999 9999999995 6789999999999999999999


Q ss_pred             HHhCC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          83 VHRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        83 lh~~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      ||++.  |+|||||.+||+|+  ++.|.|||+|+|++.....+..     ....|||.|||||.+. ..|+...||||||
T Consensus       159 LHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~s~a-----ksvIGTPEFMAPEmYE-E~YnE~VDVYaFG  230 (632)
T KOG0584|consen  159 LHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRKSHA-----KSVIGTPEFMAPEMYE-ENYNELVDVYAFG  230 (632)
T ss_pred             hhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhcccc-----ceeccCccccChHHHh-hhcchhhhhhhhh
Confidence            99886  99999999999998  5679999999999986544321     3468999999999998 6889999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++++||+|+..||..+.  +....+.++..+..+   ..+..--+++++++|.+|+.. ..+||++.+++.
T Consensus       231 MCmLEMvT~eYPYsEC~--n~AQIYKKV~SGiKP---~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  231 MCMLEMVTSEYPYSECT--NPAQIYKKVTSGIKP---AALSKVKDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHHHHhccCChhhhC--CHHHHHHHHHcCCCH---HHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            99999999999999984  456666676665443   333344578899999999999 999999999875

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.3e-37  Score=255.45  Aligned_cols=203  Identities=20%  Similarity=0.249  Sum_probs=168.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|..++..+.+|++|+++++++...+..|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||++|+
T Consensus        44 ~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~i  122 (323)
T cd05615          44 VECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRGI  122 (323)
T ss_pred             HHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4567789999988887889999999999999999999999 9999998874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.......   .......|++.|+|||++.+..++.++|+||+|+++|+|++
T Consensus       123 vHrDikp~Nill~~~---~~ikL~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt  196 (323)
T cd05615         123 IYRDLKLDNVMLDSE---GHIKIADFGMCKEHMVDG---VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA  196 (323)
T ss_pred             eccCCCHHHeEECCC---CCEEEeccccccccCCCC---ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHh
Confidence            999999999999866   889999999886532221   11134568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      |..||....   .......+......     .+..++..+.+++.+||+.+|.+|++..
T Consensus       197 G~~pf~~~~---~~~~~~~i~~~~~~-----~p~~~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         197 GQPPFDGED---EDELFQSIMEHNVS-----YPKSLSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             CCCCCCCCC---HHHHHHHHHhCCCC-----CCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence            999998743   33333333332222     2356889999999999999999999754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.6e-37  Score=251.91  Aligned_cols=221  Identities=18%  Similarity=0.253  Sum_probs=173.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc----------CCCCHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS----------KRFSLKTVLMLADQMI   77 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~----------~~~~~~~~~~~~~~i~   77 (257)
                      ..+.+.+|+.++.++. ||||+++++++..+...++++|++ +++|.+++....          ..+++..+..++.|++
T Consensus        62 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  140 (296)
T cd05051          62 AREDFLKEVKILSRLS-DPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIA  140 (296)
T ss_pred             HHHHHHHHHHHHHhcC-CCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHH
Confidence            3457888999999998 999999999999989999999999 999999997532          2689999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||++||+.|++|+||||+||+++.+   +.++|+|||.+........... .....++..|+|||.+.+..++.++|||
T Consensus       141 ~al~~LH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  216 (296)
T cd05051         141 SGMRYLESLNFVHRDLATRNCLVGKN---YTIKIADFGMSRNLYSSDYYRV-QGRAPLPIRWMAWESVLLGKFTTKSDVW  216 (296)
T ss_pred             HHHHHHHHcCccccccchhceeecCC---CceEEccccceeecccCcceee-cCcCCCCceecCHHHhhcCCCCccchhh
Confidence            99999999999999999999999876   8999999999875433221111 1334567789999999888889999999


Q ss_pred             HHHHHHHHHHh--CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         158 ALCYTLVYFLR--GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       158 slg~~l~~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |||+++|+|++  |..||..............................+|.++.+++.+||+.||++||++.++.+.|+
T Consensus       217 slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         217 AFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             hhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            99999999998  778887654322222111110000011111122457889999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-37  Score=249.47  Aligned_cols=214  Identities=17%  Similarity=0.242  Sum_probs=172.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.++.++.+||||+++++++...+..+++|||+ +++|.+++....               ..++..++..++
T Consensus        39 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  118 (270)
T cd05047          39 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA  118 (270)
T ss_pred             HHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH
Confidence            4568889999999977999999999999999999999999 999999997431               247889999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.+||+.|++|+||+|+||+++.+   +.++++|||++.......    .......+..|+|||.+.+..++.+
T Consensus       119 ~~i~~al~~lH~~~i~H~dikp~nili~~~---~~~kl~dfgl~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~~~~  191 (270)
T cd05047         119 ADVARGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVYTTN  191 (270)
T ss_pred             HHHHHHHHHHHHCCEeecccccceEEEcCC---CeEEECCCCCccccchhh----hccCCCCccccCChHHHccCCCCch
Confidence            999999999999999999999999999766   889999999875322110    1012223567999999988888999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +|+||||+++++|++ |..||......   .....+...    ........++..+.+++.+||..+|.+||++++++..
T Consensus       192 ~Di~slG~il~el~~~g~~pf~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  264 (270)
T cd05047         192 SDVWSYGVLLWEIVSLGGTPYCGMTCA---ELYEKLPQG----YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  264 (270)
T ss_pred             hhHHHHHHHHHHHHcCCCCCccccCHH---HHHHHHhCC----CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            999999999999997 99999764322   222222111    1112234678899999999999999999999999999


Q ss_pred             HHHHH
Q psy2769         233 FRNLL  237 (257)
Q Consensus       233 l~~~~  237 (257)
                      |++++
T Consensus       265 l~~~~  269 (270)
T cd05047         265 LNRML  269 (270)
T ss_pred             HHHhh
Confidence            98875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=2.4e-37  Score=246.12  Aligned_cols=213  Identities=23%  Similarity=0.312  Sum_probs=178.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh--------cCCCCHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC--------SKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~--------~~~~~~~~~~~~~~~i~~~l   80 (257)
                      .+.+.+|+.++..+. |++++++++++..+...+++|||+ +++|.+++...        ...+++..+..++.|++.||
T Consensus        40 ~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al  118 (262)
T cd00192          40 RKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM  118 (262)
T ss_pred             HHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHH
Confidence            567889999999998 999999999999988999999999 99999999865        37799999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .+||+.|++|+||+|+||+++.+   +.++|+|||.+........ ........++..|+|||...+..++.++||||+|
T Consensus       119 ~~lH~~~i~H~di~p~nili~~~---~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  194 (262)
T cd00192         119 EYLASKKFVHRDLAARNCLVGED---LVVKISDFGLSRDVYDDDY-YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFG  194 (262)
T ss_pred             HHHHcCCcccCccCcceEEECCC---CcEEEcccccccccccccc-cccccCCCcCccccCHHHhccCCcchhhccHHHH
Confidence            99999999999999999999876   8999999999877654321 1112445678899999999988889999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         161 YTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       161 ~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      +++++|++ |..||......   .....+..    ......+..+|..+.+++.+||..+|++||+++++++.|+
T Consensus       195 ~il~~l~~~g~~p~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         195 VLLWEIFTLGATPYPGLSNE---EVLEYLRK----GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HHHHHHHhcCCCCCCCCCHH---HHHHHHHc----CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            99999998 69999886332   22222222    1222233667899999999999999999999999998763

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=9.9e-38  Score=252.76  Aligned_cols=216  Identities=19%  Similarity=0.236  Sum_probs=175.2

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---------------cCCCCHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---------------SKRFSLKTVLMLAD   74 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~~~~   74 (257)
                      ..+.+|+.++.++.+||||+++++++..++..+++|||+ +++|.+++...               ...++...+..++.
T Consensus        60 ~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  139 (293)
T cd05053          60 SDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAY  139 (293)
T ss_pred             HHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHH
Confidence            457889999999966999999999999999999999999 99999999742               34688899999999


Q ss_pred             HHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcc
Q psy2769          75 QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRD  154 (257)
Q Consensus        75 ~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  154 (257)
                      |++.||.|||+.|++|+||+|+||+++.+   +.++|+|||.+.......... ......++..|+|||.+.+..++.++
T Consensus       140 qi~~al~~LH~~~ivH~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  215 (293)
T cd05053         140 QVARGMEFLASKKCIHRDLAARNVLVTED---HVMKIADFGLARDIHHIDYYR-KTTNGRLPVKWMAPEALFDRVYTHQS  215 (293)
T ss_pred             HHHHHHHHHHHCCccccccceeeEEEcCC---CeEEeCcccccccccccccee-ccCCCCCCccccCHHHhccCCcCccc
Confidence            99999999999999999999999999765   899999999987654322111 11222345679999999888899999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         155 DLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       155 Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      ||||||+++|++++ |..||.......   ....+...    ........++..+.+++.+||..+|++|||+.++++.|
T Consensus       216 Di~slG~il~el~~~g~~p~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l  288 (293)
T cd05053         216 DVWSFGVLLWEIFTLGGSPYPGIPVEE---LFKLLKEG----YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDL  288 (293)
T ss_pred             ceeehhhHHHHHhcCCCCCCCCCCHHH---HHHHHHcC----CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence            99999999999997 999998643222   22222211    11123356788999999999999999999999999999


Q ss_pred             HHHH
Q psy2769         234 RNLL  237 (257)
Q Consensus       234 ~~~~  237 (257)
                      ++++
T Consensus       289 ~~~~  292 (293)
T cd05053         289 DRML  292 (293)
T ss_pred             HHhh
Confidence            8875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=1.8e-37  Score=252.63  Aligned_cols=220  Identities=17%  Similarity=0.208  Sum_probs=178.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.++..+.+||||+++++++......+++|||+ +++|.+++....               ..++..++..++
T Consensus        64 ~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (304)
T cd05101          64 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCT  143 (304)
T ss_pred             HHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHH
Confidence            4568899999999966999999999999999999999999 899999998531               247788899999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.|||+.|++|+||||+||+++.+   +.++|+|||.+.......... ......++..|+|||.+.+..++.+
T Consensus       144 ~qi~~al~~LH~~givH~dlkp~Nili~~~---~~~kl~D~g~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  219 (304)
T cd05101         144 YQVARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDVNNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQ  219 (304)
T ss_pred             HHHHHHHHHHHHCCeeecccccceEEEcCC---CcEEECCCccceecccccccc-cccCCCCCceeeCchhhccCCCCch
Confidence            999999999999999999999999999765   889999999987654332111 1122345678999999988889999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|++++ |..||....   ..+....+....    .......++..+.+++.+||+.+|++||++.++++.
T Consensus       220 ~Di~slG~~l~el~~~g~~p~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         220 SDVWSFGVLMWEIFTLGGSPYPGIP---VEELFKLLKEGH----RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             hhHHHHHHHHHHHHcCCCCCcccCC---HHHHHHHHHcCC----cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            999999999999998 788887643   222222222211    112235688999999999999999999999999999


Q ss_pred             HHHHHHhc
Q psy2769         233 FRNLLENK  240 (257)
Q Consensus       233 l~~~~~~~  240 (257)
                      |++++.-.
T Consensus       293 l~~~~~~~  300 (304)
T cd05101         293 LDRILTLT  300 (304)
T ss_pred             HHHHHHhh
Confidence            99988743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1989|consensus

Probab=100.00  E-value=1.8e-38  Score=273.04  Aligned_cols=222  Identities=19%  Similarity=0.190  Sum_probs=180.9

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeee-ee------CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYG-TS------GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMI   77 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~-~~------~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~   77 (257)
                      ++..+.+.+|+.+++.|+||+|||.++|.. ..      ....+++|||| |++|.|++..+ ..+|++.++++|+.+++
T Consensus        75 e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~  154 (738)
T KOG1989|consen   75 EEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVC  154 (738)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHH
Confidence            455678899999999999999999999932 21      12478999999 89999999976 55699999999999999


Q ss_pred             HHHHHHHhCC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-C-----CccCCCCcccccChhHh---c
Q psy2769          78 SRLEHVHRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-I-----RTRGLTGTARYASVNAH---Q  146 (257)
Q Consensus        78 ~~l~~lh~~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~-----~~~~~~~~~~~~aPE~~---~  146 (257)
                      .|+++||...  |+|||||.+|||++.+   +..||||||.+.......... .     ..-..+-|+.|+|||.+   .
T Consensus       155 ~AVa~mH~~~pPiIHRDLKiENvLls~~---g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlys  231 (738)
T KOG1989|consen  155 EAVAAMHYLKPPIIHRDLKIENVLLSAD---GNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYS  231 (738)
T ss_pred             HHHHHHhcCCCccchhhhhhhheEEcCC---CCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhc
Confidence            9999999988  9999999999999876   899999999986433322100 0     00133578999999987   5


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         147 WLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       147 ~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      +.+++.|+|||+|||++|-|+....||..-...       .|..+.+.+++.   +.++..+.+||+.||+.||.+||++
T Consensus       232 g~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l-------aIlng~Y~~P~~---p~ys~~l~~LI~~mL~~nP~~RPnI  301 (738)
T KOG1989|consen  232 GLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL-------AILNGNYSFPPF---PNYSDRLKDLIRTMLQPNPDERPNI  301 (738)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-------eEEeccccCCCC---ccHHHHHHHHHHHHhccCcccCCCH
Confidence            667899999999999999999999999974221       244455555543   5788999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcc
Q psy2769         227 GKLRDSFRNLLENKE  241 (257)
Q Consensus       227 ~~~~~~l~~~~~~~~  241 (257)
                      -+++..+.++.....
T Consensus       302 ~Qv~~~~~~l~~~~~  316 (738)
T KOG1989|consen  302 YQVLEEIFELANKPC  316 (738)
T ss_pred             HHHHHHHHHHhcCCC
Confidence            999999988877443

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2e-37  Score=249.52  Aligned_cols=213  Identities=18%  Similarity=0.259  Sum_probs=173.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc--------------CCCCHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS--------------KRFSLKTVLMLAD   74 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~--------------~~~~~~~~~~~~~   74 (257)
                      .+.+.+|+.++..+. ||||+++++++......++++||+ +++|.+++....              ..++...+..++.
T Consensus        51 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  129 (280)
T cd05092          51 RQDFQREAELLTVLQ-HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIAS  129 (280)
T ss_pred             HHHHHHHHHHHhcCC-CCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHH
Confidence            457889999999997 999999999999988999999999 999999997532              3478899999999


Q ss_pred             HHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcc
Q psy2769          75 QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRD  154 (257)
Q Consensus        75 ~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  154 (257)
                      |++.|++|||+.|++|+||+|+||+++.+   +.++|+|||++.......... ......+++.|+|||.+.+..++.++
T Consensus       130 qi~~al~~LH~~~i~H~dlkp~nil~~~~---~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~  205 (280)
T cd05092         130 QIASGMVYLASLHFVHRDLATRNCLVGQG---LVVKIGDFGMSRDIYSTDYYR-VGGRTMLPIRWMPPESILYRKFTTES  205 (280)
T ss_pred             HHHHHHHHHHHCCeecccccHhhEEEcCC---CCEEECCCCceeEcCCCceee-cCCCccccccccCHHHhccCCcCchh
Confidence            99999999999999999999999999765   889999999986543321111 11233456789999999988899999


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         155 DLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       155 Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      ||||||+++|+|++ |..||......   .....+....    .......+|+.+.+++.+||+.||++||+++++.+.|
T Consensus       206 Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l  278 (280)
T cd05092         206 DIWSFGVVLWEIFTYGKQPWYQLSNT---EAIECITQGR----ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRL  278 (280)
T ss_pred             hHHHHHHHHHHHHcCCCCCCccCCHH---HHHHHHHcCc----cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence            99999999999998 99999764332   2222222221    1122356889999999999999999999999999887


Q ss_pred             H
Q psy2769         234 R  234 (257)
Q Consensus       234 ~  234 (257)
                      +
T Consensus       279 ~  279 (280)
T cd05092         279 Q  279 (280)
T ss_pred             h
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.7e-37  Score=258.90  Aligned_cols=214  Identities=13%  Similarity=0.133  Sum_probs=172.6

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR   91 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~   91 (257)
                      ...+|+.+++++. ||||+++++++......|++||+++++|.+++. ....+++..+..++.|++.||.|||+.||+||
T Consensus       132 ~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHr  209 (392)
T PHA03207        132 TPGREIDILKTIS-HRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHR  209 (392)
T ss_pred             cHHHHHHHHHhcC-CCCccceeeeEeeCCEEEEEehhcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence            4578999999998 999999999999999999999999889999885 45679999999999999999999999999999


Q ss_pred             CCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCC
Q psy2769          92 DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKL  171 (257)
Q Consensus        92 dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~  171 (257)
                      ||||+||+++.+   +.++|+|||++......... .......|++.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       210 Dlkp~Nill~~~---~~~~l~DfG~a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~  285 (392)
T PHA03207        210 DVKTENIFLDEP---ENAVLGDFGAACKLDAHPDT-PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNV  285 (392)
T ss_pred             CCCHHHEEEcCC---CCEEEccCccccccCccccc-ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            999999999766   88999999998765443221 11245679999999999999889999999999999999999999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHhhC---------------------------Chhhh--hcCCcHHHHHHHHHHhcCCCCC
Q psy2769         172 PWQSIKSDNEETRMQRVTEMKLTM---------------------------TPEAI--CEGTPPEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       172 p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~--~~~~~~~~~~li~~~l~~~p~~  222 (257)
                      ||.+.........+..+.......                           ..+..  ...++..+.++|.+||..||++
T Consensus       286 pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~  365 (392)
T PHA03207        286 TLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEF  365 (392)
T ss_pred             CCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhh
Confidence            998765443333332222211100                           00000  1245678899999999999999


Q ss_pred             CCChHHHHH
Q psy2769         223 EPNYGKLRD  231 (257)
Q Consensus       223 Rp~~~~~~~  231 (257)
                      ||++.+++.
T Consensus       366 Rpsa~e~l~  374 (392)
T PHA03207        366 RPSAQDILS  374 (392)
T ss_pred             CCCHHHHhh
Confidence            999999876

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2.4e-37  Score=244.92  Aligned_cols=211  Identities=16%  Similarity=0.257  Sum_probs=172.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ..+.+|+.++.++. ||||+++++++......+++|||+ +++|.+++......+++..+..++.|++.||.++|+.|++
T Consensus        37 ~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~  115 (250)
T cd05085          37 IKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCI  115 (250)
T ss_pred             HHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            46889999999997 999999999999988999999999 9999999875555689999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-  168 (257)
                      |+||+|+||+++.+   +.++++|||++..........  .....++..|+|||.+.+..++.++|+||||+++|++++ 
T Consensus       116 H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~  190 (250)
T cd05085         116 HRDLAARNCLVGEN---NVLKISDFGMSRQEDDGIYSS--SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSL  190 (250)
T ss_pred             ecccChheEEEcCC---CeEEECCCccceecccccccc--CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcC
Confidence            99999999999765   889999999986543322111  122344567999999998888999999999999999998 


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |..||.......   ....+...    ........+|..+.+++.+|++.+|++||++.++.+.|+
T Consensus       191 g~~p~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         191 GVCPYPGMTNQQ---AREQVEKG----YRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCCCCCCCCHHH---HHHHHHcC----CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            999998753322   22222211    112233568899999999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=3.3e-37  Score=253.93  Aligned_cols=212  Identities=22%  Similarity=0.294  Sum_probs=168.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-K   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~   87 (257)
                      .+.+.+|+.+++.+. ||||+++++++..++..++||||+ +++|.+++.. .+.+++..+..++.|++.||.|||+. +
T Consensus        47 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~  124 (333)
T cd06650          47 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHK  124 (333)
T ss_pred             HHHHHHHHHHHHHCC-CCcccceeEEEEECCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            356889999999998 999999999999999999999999 9999999984 55689999999999999999999975 7


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++.......     .....++..|+|||.+.+..++.++|+|||||++|+|+
T Consensus       125 ivH~dlkp~Nili~~~---~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~  196 (333)
T cd06650         125 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA  196 (333)
T ss_pred             EEecCCChhhEEEcCC---CCEEEeeCCcchhhhhhc-----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999999766   789999999886543221     13346889999999999888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHH-------------------------------------HHHHHHHhhCChhhhh-cCCcHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRM-------------------------------------QRVTEMKLTMTPEAIC-EGTPPEFA  209 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~-~~~~~~~~  209 (257)
                      +|..||............                                     ..+.........+... ..++.++.
T Consensus       197 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (333)
T cd06650         197 IGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQ  276 (333)
T ss_pred             HCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHH
Confidence            999999764322111100                                     0000000011111111 23678899


Q ss_pred             HHHHHHhcCCCCCCCChHHHHH
Q psy2769         210 EFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       210 ~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +++.+||+.||++||++++++.
T Consensus       277 ~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         277 DFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             HHHHHhccCCcccCcCHHHHhh
Confidence            9999999999999999999964

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.2e-37  Score=251.02  Aligned_cols=214  Identities=14%  Similarity=0.175  Sum_probs=173.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---------------cCCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---------------SKRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.++..+. ||||+++++++......++++||+ +++|.+++...               ...++...+..++
T Consensus        52 ~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (283)
T cd05091          52 REEFKHEAMMRSRLQ-HPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV  130 (283)
T ss_pred             HHHHHHHHHHHhcCC-CCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence            356888999999998 999999999999988999999999 89999998632               1347888899999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.++|++|++|+||||+||+++.+   +.++|+|||++......... .......+++.|+|||.+.+..++.+
T Consensus       131 ~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~  206 (283)
T cd05091         131 TQIAAGMEFLSSHHVVHKDLATRNVLVFDK---LNVKISDLGLFREVYAADYY-KLMGNSLLPIRWMSPEAIMYGKFSID  206 (283)
T ss_pred             HHHHHHHHHHHHcCccccccchhheEecCC---CceEecccccccccccchhe-eeccCccCCccccCHHHHhcCCCCcc
Confidence            999999999999999999999999999765   78999999987755332211 11133445778999999988889999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|+|++ |..||.+...   ......+...    ........+|..+.+++..||+.+|++||++++++..
T Consensus       207 ~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~i~~~----~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         207 SDIWSYGVVLWEVFSYGLQPYCGYSN---QDVIEMIRNR----QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHcC----CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            999999999999998 8889987433   2222332222    2222346789999999999999999999999999998


Q ss_pred             HHH
Q psy2769         233 FRN  235 (257)
Q Consensus       233 l~~  235 (257)
                      |+.
T Consensus       280 l~~  282 (283)
T cd05091         280 LRT  282 (283)
T ss_pred             hhC
Confidence            864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG4278|consensus

Probab=100.00  E-value=2.4e-38  Score=263.05  Aligned_cols=219  Identities=21%  Similarity=0.358  Sum_probs=191.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..++|++|+.+++.|+ |||+++++|+|+....+|+|+||| .|+|.++++++ ...++......++.||.+|+.||.++
T Consensus       306 eveEFLkEAAvMKeik-HpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk  384 (1157)
T KOG4278|consen  306 EVEEFLKEAAVMKEIK-HPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK  384 (1157)
T ss_pred             hHHHHHHHHHHHHhhc-CccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence            4678999999999999 999999999999999999999999 99999999987 44577888899999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      +++||||..+|+|+..+   ..||+.|||+++.......  +......-+..|.|||.+....++.++|||+|||++||+
T Consensus       385 nFIHRDLAARNCLVgEn---hiVKvADFGLsRlMtgDTY--TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEI  459 (1157)
T KOG4278|consen  385 NFIHRDLAARNCLVGEN---HIVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI  459 (1157)
T ss_pred             hhhhhhhhhhhcccccc---ceEEeeccchhhhhcCCce--ecccCccCcccccCcccccccccccchhhHHHHHHHHHH
Confidence            99999999999999876   8999999999987655432  222334456789999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      .| |-.||.+..-......+.+..++..+       ++||+.+.+|++.||+++|.+||++.++-.-|+.++...
T Consensus       460 ATYGMsPYPGidlSqVY~LLEkgyRM~~P-------eGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s  527 (1157)
T KOG4278|consen  460 ATYGMSPYPGIDLSQVYGLLEKGYRMDGP-------EGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS  527 (1157)
T ss_pred             HhcCCCCCCCccHHHHHHHHhccccccCC-------CCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence            98 99999998766666666555444433       899999999999999999999999999999998887644

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.6e-37  Score=247.42  Aligned_cols=212  Identities=17%  Similarity=0.245  Sum_probs=176.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++.+. ||||+++++++......+++|||+ +++|.+++... ...++...+..++.|++.||.+||+.|
T Consensus        46 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  124 (261)
T cd05148          46 QQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN  124 (261)
T ss_pred             HHHHHHHHHHHhcCC-CcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            567899999999998 999999999999999999999999 89999999853 456899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.........   .....++..|++||.+.+..++.++|+||||+++++|+
T Consensus       125 i~h~dl~~~nilv~~~---~~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~  198 (261)
T cd05148         125 SIHRDLAARNILVGED---LVCKVADFGLARLIKEDVYL---SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMF  198 (261)
T ss_pred             eeccccCcceEEEcCC---ceEEEccccchhhcCCcccc---ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999876   88999999988665332111   12334567899999998888899999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      + |..||....   ..+.+..+...    ........+|+.+.+++.+||..+|++||++.++.+.|+.
T Consensus       199 ~~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         199 TYGQVPYPGMN---NHEVYDQITAG----YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             cCCCCCCCcCC---HHHHHHHHHhC----CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            8 899998743   22222332221    1122236788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=3.3e-37  Score=245.85  Aligned_cols=214  Identities=19%  Similarity=0.259  Sum_probs=173.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.++.++. ||||+++++.+.. ...+++|||+ +++|.+++... ...++...+..++.|++.||+++|+.|
T Consensus        45 ~~~~~~E~~~l~~l~-~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (262)
T cd05071          45 PEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN  122 (262)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEECC-CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            457899999999998 9999999998754 4589999999 89999999853 345889999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.........  ......++..|+|||...+..++.++|+||||+++|+|+
T Consensus       123 i~H~dl~p~Nill~~~---~~~~L~dfg~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ell  197 (262)
T cd05071         123 YVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT  197 (262)
T ss_pred             ccccccCcccEEEcCC---CcEEeccCCceeeccccccc--cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999766   88999999998765433211  112334567899999998888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      + |..||......   ..+..+...    ........+|..+.+++.+|++.+|++||++.++.+.|++++
T Consensus       198 t~g~~p~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         198 TKGRVPYPGMVNR---EVLDQVERG----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             cCCCCCCCCCChH---HHHHHHhcC----CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            9 88899865332   222222111    111223568899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-37  Score=245.74  Aligned_cols=211  Identities=22%  Similarity=0.284  Sum_probs=173.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++......++++|++ +++|.+.+.. ...+++..+..++.|++.||.+||+.|+
T Consensus        48 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i  125 (263)
T cd06625          48 VNALECEIQLLKNLQ-HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILEGVEYLHSNMI  125 (263)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            346888999999997 999999999999999999999999 9999999874 4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.................++..|+|||.+.+...+.++||||+|+++|+|++
T Consensus       126 ~H~dl~p~nilv~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  202 (263)
T cd06625         126 VHRDIKGANILRDSA---GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT  202 (263)
T ss_pred             ecCCCCHHHEEEcCC---CCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHh
Confidence            999999999999766   88999999998765432211111123457789999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+.||.....   ........   ........+..++..+.+++++||..+|.+||++.++++
T Consensus       203 g~~p~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         203 EKPPWAEFEA---MAAIFKIA---TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             CCCCccccch---HHHHHHHh---ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence            9999986422   22222221   111223344678999999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=2.2e-37  Score=246.07  Aligned_cols=217  Identities=18%  Similarity=0.262  Sum_probs=173.8

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeee-eCCccEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGT-SGDYNILVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMIS   78 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~   78 (257)
                      |........+.+.+|+.++.++. |++++++++++. .++..++++||+ +++|.+++.... ..+++..+..++.|++.
T Consensus        35 k~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~  113 (256)
T cd05082          35 KCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE  113 (256)
T ss_pred             EEeCCCchHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence            33333344557889999999998 999999999754 456789999999 899999998543 34889999999999999


Q ss_pred             HHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHH
Q psy2769          79 RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEA  158 (257)
Q Consensus        79 ~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~s  158 (257)
                      ||++||+.|++|+||+|+||+++.+   +.++++|||++.......      .....+..|+|||.+.+..++.++||||
T Consensus       114 ~l~~lH~~~i~H~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~s  184 (256)
T cd05082         114 AMEYLEANNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVWS  184 (256)
T ss_pred             HHHHHHhCCEeccccchheEEEcCC---CcEEecCCccceeccccC------CCCccceeecCHHHHccCCCCchhhhHH
Confidence            9999999999999999999999766   899999999887543321      2233456899999999888899999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         159 LCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       159 lg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ||+++|+|++ |..||.....   ......+...    ........+|+.+.+++.+||..+|++||++.++.+.|++
T Consensus       185 lG~i~~~l~~~g~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         185 FGILLWEIYSFGRVPYPRIPL---KDVVPRVEKG----YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcC----CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            9999999997 9999976432   2222222211    1222336789999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=6.9e-37  Score=250.54  Aligned_cols=221  Identities=15%  Similarity=0.121  Sum_probs=165.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEeccCCCHHHHHHHh--------cCCCCHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELLGPSLEDLFQYC--------SKRFSLKTVLMLADQMISR   79 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~i~~~   79 (257)
                      ...+.+|+.+++++. ||||+++++++..  +...++++||++++|.+++...        ...+++..+..++.|++.|
T Consensus        42 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  120 (317)
T cd07868          42 SMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDG  120 (317)
T ss_pred             cHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHH
Confidence            446789999999998 9999999998854  4568999999988999988642        1258899999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeecc-CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLE  157 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~-~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~  157 (257)
                      |.|||+.|++|+||||+||++..+ ...+.+||+|||++.................+++.|+|||++.+. .++.++|+|
T Consensus       121 l~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  200 (317)
T cd07868         121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW  200 (317)
T ss_pred             HHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHH
Confidence            999999999999999999999643 234789999999997664433222222456789999999999774 578899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCcc------HHHHHHHHHHHHhh-----------CC----------------------hh
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDN------EETRMQRVTEMKLT-----------MT----------------------PE  198 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~-----------~~----------------------~~  198 (257)
                      |+||++|+|++|.+||.......      ....+..+......           ..                      .+
T Consensus       201 slG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (317)
T cd07868         201 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYME  280 (317)
T ss_pred             HHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHH
Confidence            99999999999999997533211      01111111110000           00                      00


Q ss_pred             hhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         199 AICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       199 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ......+..+.++|++||..||.+|||++++++
T Consensus       281 ~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         281 KHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             hcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence            001123456889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=3.5e-37  Score=245.45  Aligned_cols=213  Identities=18%  Similarity=0.287  Sum_probs=172.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.+++++. ||+++++++++.. ...+++|||+ +++|.+++... ...++...+..++.|++.||.+||+.
T Consensus        44 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~  121 (260)
T cd05069          44 MPEAFLQEAQIMKKLR-HDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM  121 (260)
T ss_pred             cHHHHHHHHHHHHhCC-CCCeeeEEEEEcC-CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3457889999999998 9999999998864 4689999999 88999999753 34588999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+.........  ......++..|+|||...+...+.++|+||||+++|+|
T Consensus       122 ~i~H~dl~~~Nill~~~---~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el  196 (260)
T cd05069         122 NYIHRDLRAANILVGDN---LVCKIADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL  196 (260)
T ss_pred             CEeecccCcceEEEcCC---CeEEECCCccceEccCCccc--ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHH
Confidence            99999999999999766   88999999998765432211  11223456789999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ++ |..||......   .....+...    .........|..+.+++.+||+.+|++||+++++.+.|++
T Consensus       197 ~t~g~~p~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         197 VTKGRVPYPGMVNR---EVLEQVERG----YRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HhCCCCCCCCCCHH---HHHHHHHcC----CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            99 99999874332   222222211    1122235688999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=3.3e-37  Score=247.80  Aligned_cols=212  Identities=19%  Similarity=0.242  Sum_probs=170.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------KRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~l   80 (257)
                      ..+.+|+.+++.+. ||||+++++++..+...+++|||+ +++|.+++....         ..++...+..++.|++.||
T Consensus        54 ~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  132 (277)
T cd05062          54 IEFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM  132 (277)
T ss_pred             HHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHH
Confidence            45788999999997 999999999999888999999999 999999987532         2356778899999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .|||+.|++|+||||+||+++.+   +.++++|||++............ ....++..|+|||.+.+..++.++|+||||
T Consensus       133 ~~lH~~~~vH~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  208 (277)
T cd05062         133 AYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYRKG-GKGLLPVRWMSPESLKDGVFTTYSDVWSFG  208 (277)
T ss_pred             HHHHHCCcccCCcchheEEEcCC---CCEEECCCCCccccCCcceeecC-CCCccCHhhcChhHhhcCCcCchhHHHHHH
Confidence            99999999999999999999866   88999999998654432211111 223456789999999988899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         161 YTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       161 ~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      +++|+|++ |..||.....   ......+...    ........++..+.+++.+||..+|++||++.++++.|+
T Consensus       209 ~~l~el~~~~~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         209 VVLWEIATLAEQPYQGMSN---EQVLRFVMEG----GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHHHHHcCCCCCCCCCCH---HHHHHHHHcC----CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            99999998 7899987432   2222222221    112223568889999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=3.7e-37  Score=246.15  Aligned_cols=216  Identities=22%  Similarity=0.289  Sum_probs=175.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+|+.+++++. ||||+++++++...+..++++||+ +++|.+++...   ...+++..+..++.|++.||.|||+
T Consensus        46 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  124 (267)
T cd08228          46 RQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS  124 (267)
T ss_pred             HHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            346788999999998 999999999999989999999999 89999888642   3458899999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||+|+||+++.+   +.++|+|||.+........   ......++..|+|||.+.+...+.++|+||+|+++|+
T Consensus       125 ~~i~H~dl~~~nil~~~~---~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~e  198 (267)
T cd08228         125 RRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE  198 (267)
T ss_pred             CCeeCCCCCHHHEEEcCC---CCEEECccccceeccchhH---HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence            999999999999999766   7899999998876543221   1123468889999999998888999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |++|..||..... +.......+....   .++.....++..+.+++.+||..+|++||++.++++.++++
T Consensus       199 l~~g~~p~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         199 MAALQSPFYGDKM-NLFSLCQKIEQCD---YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HhcCCCCCccccc-cHHHHHHHHhcCC---CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            9999999976332 2222222222111   11111245778899999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=1.8e-37  Score=258.75  Aligned_cols=209  Identities=18%  Similarity=0.204  Sum_probs=170.0

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|+.++..+. ||||+++++++.+....++||||+ +++|.+++.  ...+++..+..++.|++.||.|||+.|++
T Consensus        88 ~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~--~~~l~~~~~~~~~~qi~~aL~~LH~~~iv  164 (370)
T cd05596          88 AFFWEERDIMAHAN-SEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMS--NYDIPEKWARFYTAEVVLALDAIHSMGFI  164 (370)
T ss_pred             HHHHHHHHHHHhCC-CCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            45778999999998 999999999999999999999999 999999887  35689999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC----CCCCcchHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL----DQSPRDDLEALCYTLVY  165 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~----~~~~~~Dv~slg~~l~~  165 (257)
                      ||||||+||+++.+   +.++|+|||.+.........  ......|++.|+|||.+.+.    .++.++|||||||++|+
T Consensus       165 HrDLkp~NILl~~~---~~~kL~DfG~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilye  239 (370)
T cd05596         165 HRDVKPDNMLLDKS---GHLKLADFGTCMKMDANGMV--RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE  239 (370)
T ss_pred             ccCCCHHHEEEcCC---CCEEEEeccceeeccCCCcc--cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHH
Confidence            99999999999766   89999999998765432211  11345789999999998754    36889999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCC--CCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE--EPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp~~~~~~~  231 (257)
                      |++|..||....   ....+..+.........+. ...+|..+.++|.+||..+|.+  |++++++++
T Consensus       240 lltG~~Pf~~~~---~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         240 MLVGDTPFYADS---LVGTYSKIMDHKNSLTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             HHhCCCCcCCCC---HHHHHHHHHcCCCcCCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            999999998743   2333344433222221111 1357899999999999999988  999999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=2.2e-37  Score=247.72  Aligned_cols=216  Identities=13%  Similarity=0.267  Sum_probs=174.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|+.++..+. ||||+++++++..+...+++|||+ +++|.+++......+++.++..++.|++.||.+||+.|+
T Consensus        49 ~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~  127 (269)
T cd05065          49 RRDFLSEASIMGQFD-HPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY  127 (269)
T ss_pred             HHHHHHHHHHHHhCC-CcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            457889999999998 999999999999999999999999 899999998656678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCC--CCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGL--TGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~--~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      +|+||+|+||+++.+   +.++++|||.+................  ..+..|+|||.+.+..++.++||||+|+++||+
T Consensus       128 ~H~dl~p~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~  204 (269)
T cd05065         128 VHRDLAARNILVNSN---LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV  204 (269)
T ss_pred             eecccChheEEEcCC---CcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHH
Confidence            999999999999765   789999999886544322111110111  123579999999988899999999999999998


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      ++ |..||.......   ....+... ..   ......+|..+.+++.+||..+|++||++++++..|+++
T Consensus       205 l~~g~~p~~~~~~~~---~~~~i~~~-~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         205 MSYGERPYWDMSNQD---VINAIEQD-YR---LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             hcCCCCCCCCCCHHH---HHHHHHcC-Cc---CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            86 999998643322   22222111 11   112256889999999999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=6.3e-37  Score=245.13  Aligned_cols=215  Identities=17%  Similarity=0.238  Sum_probs=167.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS----KRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+|+.+++.+. ||||+++++.+......++||||+ +++|.+++....    ...+...+..++.|++.||+|||+
T Consensus        40 ~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  118 (269)
T cd05042          40 LLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ  118 (269)
T ss_pred             HHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence            45788999999997 999999999999989999999999 999999998542    234677889999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-------CCCCCcchHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-------LDQSPRDDLEA  158 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~Dv~s  158 (257)
                      .|++|+||||+||+++.+   +.++++|||.+............ ....++..|+|||++..       ...+.++||||
T Consensus       119 ~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws  194 (269)
T cd05042         119 ADFIHSDLALRNCQLTAD---LSVKIGDYGLALEQYPEDYYITK-DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWS  194 (269)
T ss_pred             cCEecccccHhheEecCC---CcEEEeccccccccccchheecc-CCCCCcccccCHHHHhhccccccccccchhhHHHH
Confidence            999999999999999876   88999999987643222111111 23345677999999753       34578999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         159 LCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       159 lg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      ||+++|+|++ |..||....+.+.  ....+.........+.....+++.+.+++..|+ .||++||+++++++.|
T Consensus       195 lG~~l~el~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         195 LGVTMWELFTAADQPYPDLSDEQV--LKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             HHHHHHHHHhCCCCCCCcCCHHHH--HHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            9999999998 7889886533221  111122222333344445678899999999999 5999999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=3.4e-37  Score=244.79  Aligned_cols=210  Identities=20%  Similarity=0.207  Sum_probs=173.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.++..+. ||||+++++.+.++...++++||+ +++|.+++... ...+++..+..++.|++.||.+||+.
T Consensus        41 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~  119 (255)
T cd08219          41 AVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK  119 (255)
T ss_pred             HHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            4567888999999998 999999999999999999999999 89999988753 45689999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++++|||.+.........   .....+++.|+|||++.+..++.++|+||+|+++|+|
T Consensus       120 ~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l  193 (255)
T cd08219         120 RVLHRDIKSKNIFLTQN---GKVKLGDFGSARLLTSPGAY---ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYEL  193 (255)
T ss_pred             CcccCCCCcceEEECCC---CcEEEcccCcceeecccccc---cccccCCccccCHHHHccCCcCchhhhhhhchhheeh
Confidence            99999999999999765   88999999998765432211   1345688899999999998899999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      ++|..||....   .......+...    .....+..++..+.+++.+||+.||++||++.+++..
T Consensus       194 ~~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         194 CTLKHPFQANS---WKNLILKVCQG----SYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             hhccCCCCCCC---HHHHHHHHhcC----CCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            99999998632   22222222221    1122335688899999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=5.5e-37  Score=247.38  Aligned_cols=224  Identities=19%  Similarity=0.187  Sum_probs=173.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+|+.+++++. |||++++.+++...  ...+++|||+ +++|.+++......++...+..++.|++.||.++|+.
T Consensus        50 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~  128 (284)
T cd05079          50 IADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR  128 (284)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            457889999999998 99999999988764  5689999999 9999999975555689999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+.................++..|+|||.+.+..++.++||||||+++|+|
T Consensus       129 gi~H~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el  205 (284)
T cd05079         129 QYVHRDLAARNVLVESE---HQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYEL  205 (284)
T ss_pred             CeeecccchheEEEcCC---CCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhh
Confidence            99999999999999765   889999999987654432211111334567789999999888889999999999999999


Q ss_pred             HhCCCCCCCCCCc--------cHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         167 LRGKLPWQSIKSD--------NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       167 ~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      +++..|+......        ...................+....++..+.+++.+||+.+|++||+++++++.+++++
T Consensus       206 lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~  284 (284)
T cd05079         206 LTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL  284 (284)
T ss_pred             hcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence            9976654321100        0000001111111111122233678899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0607|consensus

Probab=100.00  E-value=6e-38  Score=242.08  Aligned_cols=229  Identities=19%  Similarity=0.239  Sum_probs=189.9

Q ss_pred             CccCCCC--CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy2769           1 MKVEPVR--NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMI   77 (257)
Q Consensus         1 ~k~~~~~--~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~   77 (257)
                      ||+..+.  ..+.++.+|++++..+++|+||++++++|+++..+|+|||-+ ||+|.+.+.. .+.|++.++..+..+|+
T Consensus       108 VKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~-~~~F~E~EAs~vvkdia  186 (463)
T KOG0607|consen  108 VKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQK-RKHFNEREASRVVKDIA  186 (463)
T ss_pred             hhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHH-hhhccHHHHHHHHHHHH
Confidence            3554442  457899999999999999999999999999999999999999 9999999985 67899999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC----CCCCccCCCCcccccChhHhc-----CC
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP----PRIRTRGLTGTARYASVNAHQ-----WL  148 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~~aPE~~~-----~~  148 (257)
                      .||.|||.+||.|||+||+||+-..-..-.-+|||||.+...+.....    ..+...+.+|+..|||||+..     ..
T Consensus       187 ~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~  266 (463)
T KOG0607|consen  187 SALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQAT  266 (463)
T ss_pred             HHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccc
Confidence            999999999999999999999987544445689999988765433321    122234678999999999873     23


Q ss_pred             CCCCcchHHHHHHHHHHHHhCCCCCCCCCCcc------------HHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHh
Q psy2769         149 DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDN------------EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       149 ~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      .|+.+.|.||||+++|-|+.|.+||.+.-..+            .......|..+.+.++... +..+|.+..++|..++
T Consensus       267 ~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkd-WahIS~eakdlisnLl  345 (463)
T KOG0607|consen  267 FYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD-WAHISSEAKDLISNLL  345 (463)
T ss_pred             cccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhh-hHHhhHHHHHHHHHHH
Confidence            57899999999999999999999998865433            3555667777777776554 4689999999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..++.+|.++.+++.
T Consensus       346 vrda~~rlsa~~vln  360 (463)
T KOG0607|consen  346 VRDAKQRLSAAQVLN  360 (463)
T ss_pred             hccHHhhhhhhhccC
Confidence            999999999988876

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=5.5e-37  Score=244.27  Aligned_cols=213  Identities=17%  Similarity=0.270  Sum_probs=172.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.+++++. ||+++++++++.. ...+++|||+ +++|.+++... ...+++..+..++.|++.||.+||+.
T Consensus        44 ~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~  121 (260)
T cd05070          44 SPESFLEEAQIMKKLR-HDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM  121 (260)
T ss_pred             CHHHHHHHHHHHHhcC-CCceEEEEeEECC-CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3457899999999998 9999999998864 4589999999 89999999753 34589999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+.........  ......++..|+|||...+..++.++|+||||+++|+|
T Consensus       122 ~i~H~di~p~Nili~~~---~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  196 (260)
T cd05070         122 NYIHRDLRSANILVGDG---LVCKIADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL  196 (260)
T ss_pred             CcccCCCccceEEEeCC---ceEEeCCceeeeeccCcccc--cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHH
Confidence            99999999999999865   88999999998765432211  11223355679999999888889999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ++ |..||......   +....+..    ..........|..+.+++.+||..+|++||+++++.+.|++
T Consensus       197 ~~~g~~p~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         197 VTKGRVPYPGMNNR---EVLEQVER----GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HhcCCCCCCCCCHH---HHHHHHHc----CCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            99 89999864322   22222221    11222335688999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.1e-36  Score=251.04  Aligned_cols=219  Identities=19%  Similarity=0.266  Sum_probs=174.4

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHhc---------------------------
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYCS---------------------------   61 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~~---------------------------   61 (257)
                      +.+.+|+.++.++.+||||+++++++.. +...++++||+ +++|.+++....                           
T Consensus        55 ~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (337)
T cd05054          55 KALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLD  134 (337)
T ss_pred             HHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccc
Confidence            4577899999999669999999998764 45788999999 999999986421                           


Q ss_pred             ---------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCe
Q psy2769          62 ---------------------------------KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNT  108 (257)
Q Consensus        62 ---------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~  108 (257)
                                                       ..+++..+..++.|++.||.|||+.||+||||||.||+++.+   +.
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~---~~  211 (337)
T cd05054         135 SVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN---NV  211 (337)
T ss_pred             cCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC---Cc
Confidence                                             257889999999999999999999999999999999999865   78


Q ss_pred             EEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHH
Q psy2769         109 VYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQR  187 (257)
Q Consensus       109 ~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~  187 (257)
                      ++|+|||++..+...... .......++..|+|||.+.+..++.++|||||||++++|++ |..||........   ...
T Consensus       212 vkL~DfG~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~---~~~  287 (337)
T cd05054         212 VKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE---FCR  287 (337)
T ss_pred             EEEeccccchhcccCcch-hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH---HHH
Confidence            999999998765332211 11133455678999999999999999999999999999997 9999986433221   111


Q ss_pred             HHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         188 VTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      .....   ........+++.+.+++.+||+.+|++||+++++++.|++++..
T Consensus       288 ~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~  336 (337)
T cd05054         288 RLKEG---TRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE  336 (337)
T ss_pred             HHhcc---CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            11111   11122246788999999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=9.4e-38  Score=256.47  Aligned_cols=202  Identities=20%  Similarity=0.202  Sum_probs=164.7

Q ss_pred             cccHHHHHHH-HHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNFY-EKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~~-~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+..|...+ +.+. ||||+++++++..++..++||||+ +++|...+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        40 ~~~~~e~~~~l~~~~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~gi  117 (325)
T cd05604          40 KHIMAERNVLLKNVK-HPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINI  117 (325)
T ss_pred             HHHHHHHHHHHHhCC-CCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4556666654 4455 999999999999999999999999 9999888874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.......   .......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       118 vH~Dlkp~NIll~~~---~~~kL~DfG~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~  191 (325)
T cd05604         118 VYRDLKPENILLDSQ---GHVVLTDFGLCKEGIAQS---DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLY  191 (325)
T ss_pred             eecCCCHHHeEECCC---CCEEEeecCCcccCCCCC---CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhc
Confidence            999999999999766   889999999986432211   11144568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGK  228 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  228 (257)
                      |..||...   +..+....+.....     ...+..+..+.+++++|+..+|.+||++.+
T Consensus       192 G~~pf~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         192 GLPPFYCR---DVAEMYDNILHKPL-----VLRPGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             CCCCCCCC---CHHHHHHHHHcCCc-----cCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence            99999864   33333333333222     222568899999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0663|consensus

Probab=100.00  E-value=1.9e-37  Score=240.42  Aligned_cols=213  Identities=18%  Similarity=0.166  Sum_probs=173.3

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .-.+|+.++.+++ ||||+.+..+...  -+.+|+|||||..+|..++....++|+..++..+..|++.|+.|||+.+|+
T Consensus       121 tsLREIniLl~~~-H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wil  199 (419)
T KOG0663|consen  121 TSLREINILLKAR-HPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWIL  199 (419)
T ss_pred             hhHHHHHHHHhcC-CCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeE
Confidence            4579999999999 9999999887653  346999999999999999998888999999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~  168 (257)
                      |||||++|++++..   |.+||+|||+++.++......   ...+-|..|.|||++.+.. |+...|+||+|||+.|+++
T Consensus       200 HRDLK~SNLLm~~~---G~lKiaDFGLAR~ygsp~k~~---T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~  273 (419)
T KOG0663|consen  200 HRDLKTSNLLLSHK---GILKIADFGLAREYGSPLKPY---TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLT  273 (419)
T ss_pred             ecccchhheeeccC---CcEEecccchhhhhcCCcccC---cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHh
Confidence            99999999999766   999999999999886653322   4567899999999998875 6889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCCh-----------------------hhhh-cCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTP-----------------------EAIC-EGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~-~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      +.+.|.+...-+....+.+....+....+                       ..+. ..+++.-.+++..+|..||.+|.
T Consensus       274 ~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~  353 (419)
T KOG0663|consen  274 QKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRI  353 (419)
T ss_pred             cCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccc
Confidence            99999985444433333322211110000                       0010 12557888999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      |+++.++
T Consensus       354 tA~~~L~  360 (419)
T KOG0663|consen  354 TAEDGLK  360 (419)
T ss_pred             cHHHhhc
Confidence            9998865

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1e-36  Score=241.95  Aligned_cols=209  Identities=20%  Similarity=0.233  Sum_probs=174.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.++..+. ||||+++++++...+..++++||+ +++|.+++... ...++...+..++.|++.||.+||+.
T Consensus        42 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~  120 (256)
T cd08529          42 EREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK  120 (256)
T ss_pred             HHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567889999999998 999999999999999999999999 99999999864 46789999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+.........   .....+++.|+|||+..+..++.++|+||||+++++|
T Consensus       121 ~i~h~dl~~~nili~~~---~~~~l~df~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  194 (256)
T cd08529         121 KILHRDIKSLNLFLDAY---DNVKIGDLGVAKLLSDNTNF---ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYEC  194 (256)
T ss_pred             CcccCCCCcceEEEeCC---CCEEEcccccceeccCccch---hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHH
Confidence            99999999999999876   88999999998765443211   1334678899999999998889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   .......+...    ..+.....++..+.+++.+||+.+|++||++.++++
T Consensus       195 ~~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         195 CTGKHPFDANN---QGALILKIIRG----VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HhCCCCCCCCC---HHHHHHHHHcC----CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            99999998643   22222222221    122223468899999999999999999999998875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=5.5e-37  Score=246.74  Aligned_cols=219  Identities=16%  Similarity=0.190  Sum_probs=175.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++... ..+++++++ +++|.+.+......+++..+..++.|++.||.|||+.|+
T Consensus        53 ~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  130 (279)
T cd05109          53 NKEILDEAYVMAGVG-SPYVCRLLGICLTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL  130 (279)
T ss_pred             HHHHHHHHHHHHhcC-CCCCceEEEEEcCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            446788999999998 99999999998754 478999999 999999998656679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++........... .....++..|+|||...+..++.++||||||+++|||++
T Consensus       131 iH~dlkp~Nil~~~~---~~~kL~dfG~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t  206 (279)
T cd05109         131 VHRDLAARNVLVKSP---NHVKITDFGLARLLDIDETEYH-ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMT  206 (279)
T ss_pred             eccccccceEEEcCC---CcEEECCCCceeecccccceee-cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHc
Confidence            999999999999765   7899999999876543221111 122334678999999998889999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                       |..||.........   ..+...    ........++..+.+++.+||+.||+.||++.++++.|+++....+
T Consensus       207 ~g~~p~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~  273 (279)
T cd05109         207 FGAKPYDGIPAREIP---DLLEKG----ERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPS  273 (279)
T ss_pred             CCCCCCCCCCHHHHH---HHHHCC----CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCc
Confidence             99999864332221   111111    1112235688999999999999999999999999999988866553

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=5.5e-37  Score=245.59  Aligned_cols=217  Identities=19%  Similarity=0.307  Sum_probs=176.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++... ..+++|||+ +++|.+++......++...+..++.|++.||.+||+.|+
T Consensus        51 ~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~  128 (270)
T cd05056          51 REKFLQEAYIMRQFD-HPHIVKLIGVITEN-PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRF  128 (270)
T ss_pred             HHHHHHHHHHHHhCC-CCchhceeEEEcCC-CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            457889999999998 99999999988764 578999999 999999998655568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||++.......... . ....++..|+|||.+....++.++||||||++++++++
T Consensus       129 ~H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~-~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~  203 (270)
T cd05056         129 VHRDIAARNVLVSSP---DCVKLGDFGLSRYLEDESYYK-A-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM  203 (270)
T ss_pred             eccccChheEEEecC---CCeEEccCceeeeccccccee-c-CCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHH
Confidence            999999999999866   889999999987654331111 1 12234567999999988888999999999999999886


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                       |..||.......   ....+....    ....+..+|..+.+++.+|+..+|++||++.++++.|.++.++.
T Consensus       204 ~g~~pf~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~  269 (270)
T cd05056         204 LGVKPFQGVKNND---VIGRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE  269 (270)
T ss_pred             cCCCCCCCCCHHH---HHHHHHcCC----cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence             999998754332   222222211    11233678999999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.5e-37  Score=246.32  Aligned_cols=220  Identities=16%  Similarity=0.199  Sum_probs=179.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.+++++. ||||+++++++.. ...++++||+ +++|.+++......+++..+..++.|++.||+|||+.|+
T Consensus        53 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  130 (279)
T cd05057          53 NKEILDEAYVMASVD-HPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRL  130 (279)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            356888999999997 9999999999887 6799999999 999999998655679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+............ ....++..|+|||.+....++.++|+||+|++++++++
T Consensus       131 ~H~di~p~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~  206 (279)
T cd05057         131 VHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDEKEYHA-EGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMT  206 (279)
T ss_pred             EecccCcceEEEcCC---CeEEECCCcccccccCcccceec-CCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhc
Confidence            999999999999765   78999999998765433221111 12223568999999988888999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKER  242 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~  242 (257)
                       |..||......+   ....+...    .....+..++..+.+++.+||..+|..||++.++.+.|+++.+...+
T Consensus       207 ~g~~p~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~  274 (279)
T cd05057         207 FGAKPYEGIPAVE---IPDLLEKG----ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQR  274 (279)
T ss_pred             CCCCCCCCCCHHH---HHHHHhCC----CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCcc
Confidence             999998753322   22222211    11222355778899999999999999999999999999999886653

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=7.4e-38  Score=257.67  Aligned_cols=211  Identities=20%  Similarity=0.235  Sum_probs=171.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||+|+++++++......++||||+ +++|.+++......+++..+..++.|++.||.+||+.|+
T Consensus        45 ~~~~~~e~~i~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i  123 (330)
T cd05601          45 VSFFEEERDILSISN-SPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY  123 (330)
T ss_pred             HHHHHHHHHHHHhCC-CCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            456788999998887 999999999999999999999999 999999998655789999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc------CCCCCCcchHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ------WLDQSPRDDLEALCYT  162 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~~Dv~slg~~  162 (257)
                      +||||||+||+++.+   +.++|+|||++.........  ......+++.|+|||++.      +..++.++||||||++
T Consensus       124 ~H~Dlkp~NIll~~~---~~~kL~Dfg~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i  198 (330)
T cd05601         124 VHRDIKPENVLIDRT---GHIKLADFGSAARLTANKMV--NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVI  198 (330)
T ss_pred             EcccCchHheEECCC---CCEEeccCCCCeECCCCCce--eeecccCCccccCHHHhccccccccCCCCCcceeecccce
Confidence            999999999999766   89999999998765443221  113346899999999987      4456789999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|+|++|..||.....   ...+..+.........+. ...+++.+.++++.||. +|++||++++++.
T Consensus       199 l~el~~g~~Pf~~~~~---~~~~~~i~~~~~~~~~~~-~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         199 AYEMIYGRSPFHEGTS---AKTYNNIMNFQRFLKFPE-DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             eeeeccCCCCCCCCCH---HHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            9999999999987432   233333332221111111 13578999999999997 9999999998864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.3e-37  Score=245.76  Aligned_cols=210  Identities=21%  Similarity=0.290  Sum_probs=173.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++......|+++|++ +++|.+++......+++..+..++.|++.|+.+||+.|+
T Consensus        42 ~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i  120 (256)
T cd06612          42 LQEIIKEISILKQCD-SPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKK  120 (256)
T ss_pred             HHHHHHHHHHHHhCC-CCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            567999999999996 999999999999999999999999 899999998656778999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+........   ......++..|+|||.+.+..++.++||||+|+++|+|++
T Consensus       121 ~H~dl~~~ni~~~~~---~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~  194 (256)
T cd06612         121 IHRDIKAGNILLNEE---GQAKLADFGVSGQLTDTMA---KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAE  194 (256)
T ss_pred             ccCCCCcceEEECCC---CcEEEcccccchhcccCcc---ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999866   8899999999876543321   1133457889999999998888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.........   ..+..  ...........++..+.+++.+||+.+|++||++.+++.
T Consensus       195 g~~p~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         195 GKPPYSDIHPMRAI---FMIPN--KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             CCCCCCCcchhhhh---hhhcc--CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            99999874332211   11111  111111122457788999999999999999999998875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=5.6e-37  Score=245.36  Aligned_cols=217  Identities=18%  Similarity=0.266  Sum_probs=174.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC------SKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~------~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ....+.+|+.+++.+. ||||+++++++......++++||+ +++|.+++...      ...++..++..++.|++.||.
T Consensus        42 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  120 (269)
T cd05044          42 EKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV  120 (269)
T ss_pred             hHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence            4557889999999998 999999999999888999999999 99999999753      234788999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccC--CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRE--NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEAL  159 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~--~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~sl  159 (257)
                      |||+.+++|+||+|+||+++.+.  ....++++|||++........... .....++..|+|||.+.+..++.++|||||
T Consensus       121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  199 (269)
T cd05044         121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRK-EGEGLLPVRWMAPESLLDGKFTTQSDVWSF  199 (269)
T ss_pred             HHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccccccccccc-CcccCCCccccCHHHHccCCcccchhHHHH
Confidence            99999999999999999998752  123799999999865533221111 123345678999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         160 CYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       160 g~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |+++|+|++ |..||.....   .+....+...    ........+|+.+.+++.+||..+|++||+++++.+.|+
T Consensus       200 G~il~ellt~g~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         200 GVLMWEILTLGQQPYPALNN---QEVLQHVTAG----GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHHHHcCCCCCcccCH---HHHHHHHhcC----CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            999999998 9999976432   2222222211    111223567899999999999999999999999998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-37  Score=247.44  Aligned_cols=209  Identities=21%  Similarity=0.238  Sum_probs=169.5

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+.+|+.++..+. ||+|+++++.+..+...+++|||+ +++|.+.+... ...+++..+..++.|++.||.|||+.|+
T Consensus        45 ~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05605          45 AMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI  123 (285)
T ss_pred             HHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            45678999999997 999999999999988999999999 99999888643 3568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++........    .....++..|+|||.+.+..++.++||||+|+++|++++
T Consensus       124 vH~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~  196 (285)
T cd05605         124 VYRDLKPENILLDDY---GHIRISDLGLAVEIPEGET----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIE  196 (285)
T ss_pred             EecCCCHHHEEECCC---CCEEEeeCCCceecCCCCc----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHH
Confidence            999999999999765   8899999999876432211    133468899999999998889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      |..||.+.......+.+....    .......+..+++.+.+++.+||..||.+||     +++++++
T Consensus       197 g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         197 GKSPFRQRKEKVKREEVERRV----KEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             CCCCCCCCchhhHHHHHHHHh----hhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            999998754332222221111    1111223356889999999999999999999     6666643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-37  Score=258.60  Aligned_cols=213  Identities=21%  Similarity=0.276  Sum_probs=174.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++..+. ||+|+++++++.++...|+||||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|
T Consensus        44 ~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g  121 (350)
T cd05573          44 QIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR-KDVFPEETARFYIAELVLALDSVHKLG  121 (350)
T ss_pred             HHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456888999999998 999999999999999999999999 9999999985 467999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCC--------------------------CCCCCccCCCCcccccC
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNC--------------------------PPRIRTRGLTGTARYAS  141 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~a  141 (257)
                      ++||||||+||+++.+   +.++|+|||++.......                          ..........|++.|+|
T Consensus       122 iiH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  198 (350)
T cd05573         122 FIHRDIKPDNILIDAD---GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIA  198 (350)
T ss_pred             eeccCCCHHHeEECCC---CCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccC
Confidence            9999999999999876   889999999987654432                          00011234578999999


Q ss_pred             hhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCC
Q psy2769         142 VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       142 PE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      ||.+.+..++.++|||||||++|+|++|..||....   .......+.........+. ...+|+.+.++|.+|+. +|.
T Consensus       199 PE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~---~~~~~~~i~~~~~~~~~p~-~~~~~~~~~~li~~ll~-dp~  273 (350)
T cd05573         199 PEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT---LQETYNKIINWKESLRFPP-DPPVSPEAIDLICRLLC-DPE  273 (350)
T ss_pred             HHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC---HHHHHHHHhccCCcccCCC-CCCCCHHHHHHHHHHcc-Chh
Confidence            999999999999999999999999999999998753   3333333333111111111 13479999999999997 999


Q ss_pred             CCCC-hHHHHH
Q psy2769         222 EEPN-YGKLRD  231 (257)
Q Consensus       222 ~Rp~-~~~~~~  231 (257)
                      +||+ ++++++
T Consensus       274 ~R~~s~~~ll~  284 (350)
T cd05573         274 DRLGSFEEIKS  284 (350)
T ss_pred             hcCCCHHHHhc
Confidence            9998 998875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=7.2e-37  Score=243.60  Aligned_cols=213  Identities=19%  Similarity=0.319  Sum_probs=173.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.++.+++ ||||+++++++.. ...++++|++ +++|.+++... +..++..++..++.|++.||.+||+.
T Consensus        44 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~  121 (260)
T cd05067          44 SPEAFLAEANLMKQLQ-HPRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK  121 (260)
T ss_pred             cHHHHHHHHHHHHhcC-CcCeeeEEEEEcc-CCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            3467899999999998 9999999998754 5689999999 99999998753 45689999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++++|||.+.........  ......++..|+|||.+.+..++.++|+||||++++++
T Consensus       122 ~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el  196 (260)
T cd05067         122 NYIHRDLRAANILVSET---LCCKIADFGLARLIEDNEYT--AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI  196 (260)
T ss_pred             CeecccccHHhEEEcCC---CCEEEccCcceeecCCCCcc--cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHH
Confidence            99999999999999866   88999999998765432111  11233456789999999988889999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ++ |..||.......   ....+...    ...+.....|..+.+++.+||+.+|++||+++++.+.|+.
T Consensus       197 ~~~g~~p~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         197 VTYGRIPYPGMTNPE---VIQNLERG----YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HhCCCCCCCCCChHH---HHHHHHcC----CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            98 999998754322   22222211    1112335678899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=2.3e-36  Score=253.61  Aligned_cols=218  Identities=19%  Similarity=0.215  Sum_probs=175.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------------------
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------------------   61 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------------------   61 (257)
                      .+.+.+|+.++.++.+||||+++++++...+..++|+||+ +|+|.+++....                           
T Consensus        84 ~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (401)
T cd05107          84 KQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQ  163 (401)
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccc
Confidence            3468899999999987999999999999988999999999 999999997431                           


Q ss_pred             ----------------------------------------------------------------------CCCCHHHHHH
Q psy2769          62 ----------------------------------------------------------------------KRFSLKTVLM   71 (257)
Q Consensus        62 ----------------------------------------------------------------------~~~~~~~~~~   71 (257)
                                                                                            ..++...+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  243 (401)
T cd05107         164 RKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVG  243 (401)
T ss_pred             cccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHH
Confidence                                                                                  1356677889


Q ss_pred             HHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCC
Q psy2769          72 LADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS  151 (257)
Q Consensus        72 ~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  151 (257)
                      ++.|++.||.|||+.|++|+||||+||+++.+   +.++|+|||++......... .......++..|+|||.+.+..++
T Consensus       244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~---~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~  319 (401)
T cd05107         244 FSYQVANGMEFLASKNCVHRDLAARNVLICEG---KLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFNNLYT  319 (401)
T ss_pred             HHHHHHHHHHHHhcCCcCcccCCcceEEEeCC---CEEEEEecCcceeccccccc-ccCCCcCCCCceeChHHhcCCCCC
Confidence            99999999999999999999999999999765   78999999998764332111 111234567889999999988889


Q ss_pred             CcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         152 PRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      .++|+||||+++|||++ |..||........  ....+...    .....+..++..+.+++.+||..+|+.||++.+++
T Consensus       320 ~~~DvwslGvil~e~l~~g~~P~~~~~~~~~--~~~~~~~~----~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell  393 (401)
T cd05107         320 TLSDVWSFGILLWEIFTLGGTPYPELPMNEQ--FYNAIKRG----YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLV  393 (401)
T ss_pred             cHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--HHHHHHcC----CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            99999999999999998 8999976533221  11111111    11122356789999999999999999999999999


Q ss_pred             HHHHHHH
Q psy2769         231 DSFRNLL  237 (257)
Q Consensus       231 ~~l~~~~  237 (257)
                      +.|++++
T Consensus       394 ~~L~~~~  400 (401)
T cd05107         394 HLVGDLL  400 (401)
T ss_pred             HHHHHHh
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=2e-37  Score=257.28  Aligned_cols=206  Identities=21%  Similarity=0.301  Sum_probs=165.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. |+||+++++++...+..++||||+ +++|.+.     ...++..+..++.|++.||.|||+.|+
T Consensus       116 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~i  189 (353)
T PLN00034        116 RRQICREIEILRDVN-HPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHI  189 (353)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceeeeEeccCCeEEEEEecCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            456889999999998 999999999999999999999999 8887542     335677888999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----CCCCCcchHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----LDQSPRDDLEALCYTL  163 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~Dv~slg~~l  163 (257)
                      +|+||||+||+++.+   +.++|+|||++.........   .....|+..|+|||.+..     ...+.++|||||||++
T Consensus       190 vHrDlkp~NIll~~~---~~~kL~DfG~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil  263 (353)
T PLN00034        190 VHRDIKPSNLLINSA---KNVKIADFGVSRILAQTMDP---CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSI  263 (353)
T ss_pred             eecCCCHHHEEEcCC---CCEEEcccccceeccccccc---ccccccCccccCccccccccccCcCCCcchhHHHHHHHH
Confidence            999999999999866   88999999998765432211   134578999999998743     2345689999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|+.||......+.......+..    .........++..+.++|.+||+.||++||++.++++
T Consensus       264 ~el~~g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        264 LEFYLGRFPFGVGRQGDWASLMCAICM----SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHhc----cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999985433332222222211    1222333578899999999999999999999999976

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6.3e-37  Score=249.04  Aligned_cols=212  Identities=18%  Similarity=0.198  Sum_probs=169.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ...+.+|+.+++++. ||||+++++++......++|+||++++|.+++......++...+..++.|++.||.+||+.|++
T Consensus        48 ~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~  126 (301)
T cd07873          48 PCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVL  126 (301)
T ss_pred             hhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            346788999999998 9999999999999999999999998899998886566789999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||++........   ......+++.|+|||.+.+. .++.++||||||+++|+|++
T Consensus       127 H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t  200 (301)
T cd07873         127 HRDLKPQNLLINER---GELKLADFGLARAKSIPTK---TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMST  200 (301)
T ss_pred             CCCCCHHHEEECCC---CcEEECcCcchhccCCCCC---cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHh
Confidence            99999999999766   8899999999865432211   11334568899999998764 46889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhh-----------------CC--------hhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLT-----------------MT--------PEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~~--------~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      |..||.......   ....+......                 ..        .......+++.+.++|.+||..||.+|
T Consensus       201 g~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R  277 (301)
T cd07873         201 GRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKR  277 (301)
T ss_pred             CCCCCCCCCHHH---HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccC
Confidence            999998743322   22211111000                 00        011124578889999999999999999


Q ss_pred             CChHHHHH
Q psy2769         224 PNYGKLRD  231 (257)
Q Consensus       224 p~~~~~~~  231 (257)
                      ||++++++
T Consensus       278 ~t~~eil~  285 (301)
T cd07873         278 ISAEEAMK  285 (301)
T ss_pred             cCHHHHhc
Confidence            99999876

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=9.6e-37  Score=243.72  Aligned_cols=217  Identities=21%  Similarity=0.264  Sum_probs=176.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      .+.+.+|+.+++.+. ||||+++++++..++..++++|++ +++|.+++...   ...+++..+..++.|++.||.+||+
T Consensus        46 ~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  124 (267)
T cd08229          46 RADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS  124 (267)
T ss_pred             HHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            357888999999997 999999999999999999999999 89999988742   3468999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||+|+||+++.+   +.++++|||.+.........   .....++..|+|||.+.+...+.++|+||+|+++|+
T Consensus       125 ~~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~  198 (267)
T cd08229         125 RRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE  198 (267)
T ss_pred             CCeecCCCCHHHEEEcCC---CCEEECcchhhhccccCCcc---cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHH
Confidence            999999999999999765   78999999988665432211   133468889999999998888999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      |++|..||..... +.......+....   .++.....+++.+.+++.+||+.+|++|||++++.+.++++.
T Consensus       199 l~~g~~p~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         199 MAALQSPFYGDKM-NLYSLCKKIEQCD---YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHhCCCCcccccc-hHHHHhhhhhcCC---CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            9999999976432 1222222222111   111112457889999999999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0658|consensus

Probab=100.00  E-value=1.4e-37  Score=243.92  Aligned_cols=220  Identities=19%  Similarity=0.222  Sum_probs=176.7

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCC-----ccEEEEeccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGD-----YNILVMELLGPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-----~~~~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ---+|+.+++.+. ||||+++.-+|.+..     ...+||||+..+|.++++..   +..++...+.-+..|++.||+||
T Consensus        63 ~knrEl~im~~l~-HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL  141 (364)
T KOG0658|consen   63 YKNRELQIMRKLD-HPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL  141 (364)
T ss_pred             cCcHHHHHHHhcC-CcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH
Confidence            3457999999888 999999988776421     46799999999999999964   67899999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~  162 (257)
                      |+.||+||||||.|+|++.  .+|.+||||||++..+..+.+.    ..+..+..|.|||.+.+. .|+.+.||||.||+
T Consensus       142 h~~~IcHRDIKPqNlLvD~--~tg~LKicDFGSAK~L~~~epn----iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV  215 (364)
T KOG0658|consen  142 HSHGICHRDIKPQNLLVDP--DTGVLKICDFGSAKVLVKGEPN----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCV  215 (364)
T ss_pred             HhcCcccCCCChheEEEcC--CCCeEEeccCCcceeeccCCCc----eeEEEeccccCHHHHcCccccCceeEEhhhhHH
Confidence            9999999999999999985  4589999999999988765433    567789999999999877 57999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHH---------Hhh-----------CChhh-hhcCCcHHHHHHHHHHhcCCCC
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEM---------KLT-----------MTPEA-ICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------~~~-----------~~~~~-~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      +.||+.|++.|.+.+..+....+.++...         ...           ..+.+ .....+++..+++.++|..+|.
T Consensus       216 ~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~  295 (364)
T KOG0658|consen  216 MAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPS  295 (364)
T ss_pred             HHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChh
Confidence            99999999999995554444443332211         000           00111 3356889999999999999999


Q ss_pred             CCCChHHHHH--HHHHHHH
Q psy2769         222 EEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       222 ~Rp~~~~~~~--~l~~~~~  238 (257)
                      +|.++.+++.  ++.++..
T Consensus       296 ~R~~~~~~l~h~fFdelr~  314 (364)
T KOG0658|consen  296 KRLSALEALAHPFFDELRD  314 (364)
T ss_pred             hcCCHHHHhcchhhHHhhC
Confidence            9999988754  4444444

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.7e-37  Score=244.08  Aligned_cols=209  Identities=22%  Similarity=0.305  Sum_probs=173.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+++.+|+.++.++. |+||+++++++......+++||++ +++|.+++.... ..+++..+..++.|++.||.+||+.|
T Consensus        44 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~  122 (256)
T cd05039          44 AQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN  122 (256)
T ss_pred             HHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            567899999999998 999999999999888999999999 899999998543 36899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.......      .....+..|+|||.+.+..++.++|+||||+++++++
T Consensus       123 i~H~di~p~Nili~~~---~~~~l~d~g~~~~~~~~~------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~  193 (256)
T cd05039         123 FVHRDLAARNVLVSED---LVAKVSDFGLAKEASQGQ------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY  193 (256)
T ss_pred             ccchhcccceEEEeCC---CCEEEccccccccccccc------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHH
Confidence            9999999999999766   889999999987653221      1223456799999998888899999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      + |..||.......   ....+...    ........+|+.+.+++.+||..+|++||++.++++.|++
T Consensus       194 ~~g~~p~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         194 SFGRVPYPRIPLKD---VVPHVEKG----YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             hcCCCCCCCCCHHH---HHHHHhcC----CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence            7 999998653222   22222211    1112235688999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=6.1e-37  Score=243.21  Aligned_cols=210  Identities=20%  Similarity=0.274  Sum_probs=170.7

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+.+|+.++.++. |||++++++++..+. .+++|||+ +++|.+++... ...++...+..++.|++.||.++|+
T Consensus        41 ~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~  118 (254)
T cd05083          41 VTAQAFLEETAVMTKLH-HKNLVRLLGVILHNG-LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES  118 (254)
T ss_pred             chHHHHHHHHHHHHhCC-CCCcCeEEEEEcCCC-cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34467899999999998 999999999987654 79999999 89999999854 3458899999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++||||+|+||+++.+   +.++|+|||++.......      .....+..|+|||.+.+..++.++|+||||+++|+
T Consensus       119 ~~~~H~dl~p~nili~~~---~~~kl~Dfg~~~~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~e  189 (254)
T cd05083         119 KKLVHRDLAARNILVSED---GVAKVSDFGLARVGSMGV------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE  189 (254)
T ss_pred             CCeeccccCcceEEEcCC---CcEEECCCccceeccccC------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHH
Confidence            999999999999999766   889999999886543211      22234568999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      |++ |..||.......   ....+... ..   ......+|..+.+++.+||+.+|+.||+++++.+.|++
T Consensus       190 l~~~g~~p~~~~~~~~---~~~~~~~~-~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         190 VFSYGRAPYPKMSLKE---VKECVEKG-YR---MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHhCCCCCCccCCHHH---HHHHHhCC-CC---CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            997 999998754322   22222211 11   11225688999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-37  Score=243.57  Aligned_cols=213  Identities=20%  Similarity=0.263  Sum_probs=172.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.+++ ||||+++++++......+++|||+ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        43 ~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~  121 (262)
T cd06613          43 DFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG  121 (262)
T ss_pred             hHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567899999999998 999999999999999999999999 89999998865468999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC---CCCCcchHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL---DQSPRDDLEALCYTLV  164 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slg~~l~  164 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+........   ......++..|+|||.+.+.   ..+.++|+||+|+++|
T Consensus       122 i~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~  195 (262)
T cd06613         122 KIHRDIKGANILLTED---GDVKLADFGVSAQLTATIA---KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAI  195 (262)
T ss_pred             ceecCCChhhEEECCC---CCEEECccccchhhhhhhh---ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHH
Confidence            9999999999999866   8899999999876543211   11334678889999999776   7788999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|++|..||.......   ....+...............++..+.+++.+||..+|++||++.+++.
T Consensus       196 ~~~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         196 ELAELQPPMFDLHPMR---ALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHhCCCCCCCCCHHH---HHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            9999999998754322   222222221111111122456788999999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=2.1e-36  Score=241.69  Aligned_cols=215  Identities=21%  Similarity=0.271  Sum_probs=176.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      .+.+.+|+.++.++. |++++++++++..++..+++|||+ +++|.+++...   ...++...+..++.+++.||.+||+
T Consensus        46 ~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  124 (267)
T cd08224          46 RQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS  124 (267)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence            567889999999997 999999999999999999999999 89999998743   3458999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||+|+||+++.+   +.++++|||.+.........   .....++..|.|||.+.+..++.++|+||+|+++|+
T Consensus       125 ~~i~h~dl~p~nil~~~~---~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~  198 (267)
T cd08224         125 KRIMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTA---AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE  198 (267)
T ss_pred             CCEecCCcChhhEEECCC---CcEEEeccceeeeccCCCcc---cceecCCccccCHHHhccCCCCchhcHHHHHHHHHH
Confidence            999999999999999766   88999999998765433211   133467889999999998889999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhh-cCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAIC-EGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |++|..||..... +.......+.....    ++.+ ..++..+.++|.+||..+|++||++.++++.|+++
T Consensus       199 l~~g~~p~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         199 MAALQSPFYGDKM-NLYSLCKKIEKCDY----PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHHCCCCcccCCc-cHHHHHhhhhcCCC----CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            9999999975331 22222222222111    1111 36788999999999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.3e-36  Score=242.47  Aligned_cols=207  Identities=15%  Similarity=0.179  Sum_probs=164.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|+.++..+. ||||+++++++..+...+++|||+ +++|..++......+++..+..++.|++.||+|||+.|+
T Consensus        48 ~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  126 (262)
T cd05077          48 SLAFFETASMMRQVS-HKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDL  126 (262)
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCe
Confidence            346778889999998 999999999999888999999999 889988887555679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCC----CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-CCCCCCcchHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVREN----FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDDLEALCYTL  163 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~----~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~Dv~slg~~l  163 (257)
                      +|+||+|+||+++.+..    ...++++|||.+......       ....++..|+|||.+. +..++.++||||||+++
T Consensus       127 vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l  199 (262)
T cd05077         127 VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR-------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTL  199 (262)
T ss_pred             ECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-------ccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence            99999999999976421    124899999987654322       3345778899999987 45678899999999999


Q ss_pred             HHHH-hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         164 VYFL-RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       164 ~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      |+|+ +|..||........    .........     .....++++.+++.+||+.||++||++.++++.+
T Consensus       200 ~el~~~~~~p~~~~~~~~~----~~~~~~~~~-----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         200 WEICYNGEIPLKDKTLAEK----ERFYEGQCM-----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HHHHhCCCCCCCCcchhHH----HHHHhcCcc-----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            9997 58888876432211    111111111     1133567899999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=8.2e-37  Score=243.46  Aligned_cols=218  Identities=17%  Similarity=0.237  Sum_probs=171.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeee-eCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGT-SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++.+. ||||+++++++. .+...++++||+ +++|.+++.......+...+..++.|++.||.|||+.+
T Consensus        40 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  118 (262)
T cd05058          40 VEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK  118 (262)
T ss_pred             HHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457788999999997 999999999765 455689999999 99999999865556778888999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||+|+||+++.+   +.++|+|||++.......... .......++..|+|||.+.+..++.++||||||+++|+|
T Consensus       119 i~H~dlk~~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  195 (262)
T cd05058         119 FVHRDLAARNCMLDES---FTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL  195 (262)
T ss_pred             ccccccCcceEEEcCC---CcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHH
Confidence            9999999999999765   789999999886543221100 111233456789999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      ++ |.+||....   .......+...    ........+|+.+.+++.+||..+|++||++.++++.|++++.
T Consensus       196 ~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         196 MTRGAPPYPDVD---SFDITVYLLQG----RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HcCCCCCCCCCC---HHHHHHHHhcC----CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            99 566676532   22222222211    1112224578899999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=9.8e-37  Score=251.39  Aligned_cols=221  Identities=18%  Similarity=0.211  Sum_probs=178.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.++.++.+||||+++++++...+..++++||+ +++|.+++....               ..++..++..++
T Consensus        61 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  140 (334)
T cd05100          61 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCA  140 (334)
T ss_pred             HHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH
Confidence            4578899999999966999999999999988999999999 999999997531               247778899999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.|||+.|++|+||+|+||+++.+   +.++|+|||.+.......... ......++..|+|||.+.+..++.+
T Consensus       141 ~qi~~al~~LH~~givH~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  216 (334)
T cd05100         141 YQVARGMEYLASQKCIHRDLAARNVLVTED---NVMKIADFGLARDVHNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQ  216 (334)
T ss_pred             HHHHHHHHHHHHCCeeccccccceEEEcCC---CcEEECCcccceecccccccc-cccCCCcCceEcCHHHhccCCcCch
Confidence            999999999999999999999999999766   889999999987654322111 1122334567999999999889999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|+|++ |..||....   ..+....+...    ........++..+.+++.+||+.+|++||++.++++.
T Consensus       217 ~Di~slG~il~el~~~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         217 SDVWSFGVLLWEIFTLGGSPYPGIP---VEELFKLLKEG----HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             hhhHHHHHHHHHHHhcCCCCCCCCC---HHHHHHHHHcC----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            999999999999998 889997643   22222222211    1122235678899999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |+++.....
T Consensus       290 l~~~~~~~~  298 (334)
T cd05100         290 LDRVLTVTS  298 (334)
T ss_pred             HHHHhhhcC
Confidence            999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=9.6e-37  Score=245.74  Aligned_cols=223  Identities=19%  Similarity=0.205  Sum_probs=175.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.+++.+. ||||+++++++..  ....+++|||+ +++|.+++......++...+..++.|++.||.+||+.
T Consensus        50 ~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~  128 (284)
T cd05038          50 RSDFEREIEILRTLD-HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ  128 (284)
T ss_pred             HHHHHHHHHHHHhCC-CCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            567999999999997 9999999999877  55789999999 9999999986555699999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+.................++..|++||...+...+.++|+||||+++++|
T Consensus       129 ~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el  205 (284)
T cd05038         129 RYIHRDLAARNILVESE---DLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYEL  205 (284)
T ss_pred             CeecCCCCHHhEEEcCC---CCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhhee
Confidence            99999999999999876   889999999987765332211111223455679999999888889999999999999999


Q ss_pred             HhCCCCCCCCCCccHH--------HHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEE--------TRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      ++|..|+.........        .....+...............+|..+.+++.+||..+|++||++.++++.|+++
T Consensus       206 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         206 FTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             eccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            9999998653221100        001111111111111122356788999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=9.7e-37  Score=244.33  Aligned_cols=215  Identities=13%  Similarity=0.233  Sum_probs=171.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee------CCccEEEEecc-CCCHHHHHHHh-----cCCCCHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS------GDYNILVMELL-GPSLEDLFQYC-----SKRFSLKTVLMLADQMI   77 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~------~~~~~~v~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~~~~i~   77 (257)
                      .+.+.+|+.++..+. ||||+++++++..      ....++++||+ +++|.+++...     ...++...+..++.|++
T Consensus        44 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  122 (272)
T cd05075          44 MEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIA  122 (272)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHH
Confidence            456888999999997 9999999997642      12578999999 89999887532     24588999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||+|||+.|++|+||||+||+++.+   +.++|+|||++........... .....+++.|++||...+..++.++|+|
T Consensus       123 ~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~~~~~pe~~~~~~~~~~~Di~  198 (272)
T cd05075         123 SGMEYLSSKSFIHRDLAARNCMLNEN---MNVCVADFGLSKKIYNGDYYRQ-GRIAKMPVKWIAIESLADRVYTTKSDVW  198 (272)
T ss_pred             HHHHHHHHCCeeccccchhheEEcCC---CCEEECCCCcccccCcccceec-CCcccCCcccCCHHHccCCCcChHHHHH
Confidence            99999999999999999999999765   8899999999876543321111 1233456789999999998899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       158 slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |||+++|+|++ |..||.....   ......+....    .......++..+.+++.+||+.+|++||+++++++.|+++
T Consensus       199 slG~il~el~~~g~~p~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         199 SFGVTMWEIATRGQTPYPGVEN---SEIYDYLRQGN----RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHcCC----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99999999999 8999986432   23223332221    1122356889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-37  Score=256.51  Aligned_cols=212  Identities=20%  Similarity=0.271  Sum_probs=170.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++.++...|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        45 ~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i  122 (364)
T cd05599          45 VAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLGY  122 (364)
T ss_pred             HHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345778999999998 999999999999999999999999 9999999884 5579999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-----------------------------------CCccCC
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-----------------------------------IRTRGL  133 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-----------------------------------~~~~~~  133 (257)
                      +||||||+||+++.+   +.++|+|||++..+.......                                   ......
T Consensus       123 vH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (364)
T cd05599         123 IHRDIKPDNLLLDAK---GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYST  199 (364)
T ss_pred             EeccCCHHHeEECCC---CCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccc
Confidence            999999999999766   899999999986543221000                                   000124


Q ss_pred             CCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHH
Q psy2769         134 TGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR  213 (257)
Q Consensus       134 ~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  213 (257)
                      .||+.|+|||++.+..++.++|||||||++|+|++|..||....   .......+.........+. ...+++.+.++|.
T Consensus       200 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~---~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~  275 (364)
T cd05599         200 VGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDN---PQETYRKIINWKETLQFPD-EVPLSPEAKDLIK  275 (364)
T ss_pred             ccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCC---HHHHHHHHHcCCCccCCCC-CCCCCHHHHHHHH
Confidence            68999999999999889999999999999999999999998743   2333333332222211111 1357899999999


Q ss_pred             HHhcCCCCCCCC---hHHHHH
Q psy2769         214 YCRGLAFSEEPN---YGKLRD  231 (257)
Q Consensus       214 ~~l~~~p~~Rp~---~~~~~~  231 (257)
                      +|+. +|.+|++   +++++.
T Consensus       276 ~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         276 RLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             HHcc-CHhhcCCCCCHHHHhc
Confidence            9996 9999998   777755

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-36  Score=243.44  Aligned_cols=212  Identities=18%  Similarity=0.257  Sum_probs=172.7

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------KRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~l   80 (257)
                      ..+.+|+.++..+. ||||+++++++......+++|||+ +++|.+++....         ..+++..+..++.|++.||
T Consensus        54 ~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  132 (277)
T cd05032          54 IEFLNEASVMKEFN-CHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGM  132 (277)
T ss_pred             HHHHHHHHHHHhCC-CCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHH
Confidence            46788999999997 999999999999999999999999 899999997431         2367889999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .|||+.|++|+||+|+||+++.+   +.++|+|||.+......... .......++..|+|||.+.+..++.++||||||
T Consensus       133 ~~lH~~~i~H~di~p~nill~~~---~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  208 (277)
T cd05032         133 AYLAAKKFVHRDLAARNCMVAED---LTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFG  208 (277)
T ss_pred             HHHHhCCccccccChheEEEcCC---CCEEECCcccchhhccCccc-ccCCCCCccccccCHHHHhcCCCCcccchHHHH
Confidence            99999999999999999999876   88999999988654433211 111334567789999999888899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         161 YTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       161 ~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      +++|++++ |..||.....   ......+..    ......+..+|..+.+++.+||..+|++|||+.++++.|+
T Consensus       209 ~il~el~t~g~~p~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         209 VVLWEMATLAEQPYQGLSN---EEVLKFVID----GGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHHHHhhccCCCCCccCCH---HHHHHHHhc----CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            99999998 9999976432   222222221    1122233567899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0577|consensus

Probab=100.00  E-value=4.9e-38  Score=259.68  Aligned_cols=205  Identities=21%  Similarity=0.257  Sum_probs=179.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      -+.+.+|+..+.+|. |||++.+.|+|......|+|||||-||-.|++....+++.+.++..|+.+.+.||+|||+++.+
T Consensus        70 WqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~I  148 (948)
T KOG0577|consen   70 WQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRI  148 (948)
T ss_pred             HHHHHHHHHHHHhcc-CCCcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            357899999999999 9999999999999999999999998888999998889999999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC---CCCCcchHHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL---DQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slg~~l~~l  166 (257)
                      |||||..||+++..   |.|||+|||.+....+.       ..++|||.|||||++...   .|+-++||||||+++.|+
T Consensus       149 HRDiKAGNILLse~---g~VKLaDFGSAsi~~PA-------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIEL  218 (948)
T KOG0577|consen  149 HRDIKAGNILLSEP---GLVKLADFGSASIMAPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL  218 (948)
T ss_pred             hhhccccceEecCC---CeeeeccccchhhcCch-------hcccCCccccchhHheeccccccCCccceeeccchhhhh
Confidence            99999999999766   99999999998765443       678999999999998544   578899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ...++|+.+++   ....+..|.+...+...   ...++..|+.+++.||..-|.+|||.+++++
T Consensus       219 AERkPPlFnMN---AMSALYHIAQNesPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  219 AERKPPLFNMN---AMSALYHIAQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             hhcCCCccCch---HHHHHHHHHhcCCCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            99999998864   34444555555444322   2568999999999999999999999988764

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.3e-36  Score=253.22  Aligned_cols=212  Identities=19%  Similarity=0.223  Sum_probs=167.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||+|+++++.+.+....|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||
T Consensus        45 ~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~gi  122 (363)
T cd05628          45 VGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGF  122 (363)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            356788999999997 999999999999999999999999 9999999984 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC--------------------------------CCCccCCCCc
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP--------------------------------RIRTRGLTGT  136 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~--------------------------------~~~~~~~~~~  136 (257)
                      +||||||+||+++.+   +.++|+|||++.........                                ........||
T Consensus       123 vHrDlKp~NILi~~~---~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt  199 (363)
T cd05628         123 IHRDIKPDNLLLDSK---GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGT  199 (363)
T ss_pred             EecCCCHHHeEECCC---CCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCC
Confidence            999999999999766   88999999998654321100                                0001234799


Q ss_pred             ccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHh
Q psy2769         137 ARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       137 ~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +.|+|||++.+..++.++|||||||++|+|++|..||....   ..+.+..+.........+. ...+++.+.++|.+++
T Consensus       200 ~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~---~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~  275 (363)
T cd05628         200 PDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET---PQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFC  275 (363)
T ss_pred             ccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC---HHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHc
Confidence            99999999999899999999999999999999999998743   3333344433222111111 1347889999999876


Q ss_pred             cCCCC---CCCChHHHHH
Q psy2769         217 GLAFS---EEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~---~Rp~~~~~~~  231 (257)
                      . +|.   .||+++++++
T Consensus       276 ~-~~~~r~~r~~~~ei~~  292 (363)
T cd05628         276 C-EWEHRIGAPGVEEIKT  292 (363)
T ss_pred             C-ChhhcCCCCCHHHHhC
Confidence            4 444   4578888865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3.1e-36  Score=243.52  Aligned_cols=216  Identities=17%  Similarity=0.239  Sum_probs=173.0

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------KRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~l   80 (257)
                      ..+.+|+.+++.+. ||||+++++++......+++|||+ +++|.+++....         ..++...+..++.|++.||
T Consensus        54 ~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l  132 (288)
T cd05061          54 IEFLNEASVMKGFT-CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM  132 (288)
T ss_pred             HHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence            35778999999997 999999999999888999999999 999999997531         2345678899999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .|||+.|++|+||||+||+++.+   +.++|+|||++............ ....++..|+|||.+.+..++.++|+||||
T Consensus       133 ~~lH~~~i~H~dikp~nili~~~---~~~~L~Dfg~~~~~~~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~DvwslG  208 (288)
T cd05061         133 AYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIYETDYYRKG-GKGLLPVRWMAPESLKDGVFTTSSDMWSFG  208 (288)
T ss_pred             HHHHhCCCcCCCCChheEEEcCC---CcEEECcCCcccccccccccccc-CCCcccccccCHHHhccCCCChHhHHHHHH
Confidence            99999999999999999999865   88999999988754332211111 223456789999999988889999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         161 YTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       161 ~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      +++|+|++ |..||.....   .+....+...    ........+++.+.+++.+||+.+|++||++.++++.|++.+.
T Consensus       209 ~~l~el~~~~~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         209 VVLWEITSLAEQPYQGLSN---EQVLKFVMDG----GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             HHHHHHHhCCCCCCCCCCH---HHHHHHHHcC----CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence            99999998 7889986432   2222222211    1112235678899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=3.6e-37  Score=252.63  Aligned_cols=201  Identities=19%  Similarity=0.180  Sum_probs=163.4

Q ss_pred             cccHHHHHH-HHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNF-YEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~-~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+.+|... ++.+. ||||+++++++.+.+..++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        40 ~~~~~e~~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i  117 (321)
T cd05603          40 NHIMAERNVLLKNLK-HPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNI  117 (321)
T ss_pred             HHHHHHHHHHHHhCC-CCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345556554 55565 999999999999999999999999 9999888874 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.......   .......+++.|+|||.+.+..++.++|||||||++|+|++
T Consensus       118 vH~Dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~  191 (321)
T cd05603         118 IYRDLKPENILLDSQ---GHVVLTDFGLCKEGVEPE---ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLY  191 (321)
T ss_pred             EeccCCHHHeEECCC---CCEEEccCCCCccCCCCC---CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhc
Confidence            999999999999766   899999999876432211   11144568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      |..||...   +.......+....     ...+...+..+.+++.+||+.+|.+||++.
T Consensus       192 g~~pf~~~---~~~~~~~~i~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         192 GLPPFYSR---DVSQMYDNILHKP-----LQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCCCCCCC---CHHHHHHHHhcCC-----CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            99999874   3333333333222     223356788999999999999999999763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1e-36  Score=245.49  Aligned_cols=210  Identities=16%  Similarity=0.251  Sum_probs=169.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. |||++++++++...+..++++||+ +++|..++......+++..+..++.|++.||.+||+.|+
T Consensus        46 ~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i  124 (282)
T cd06643          46 LEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI  124 (282)
T ss_pred             HHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            456788999999997 999999999999999999999999 899988877545679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcchHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDDLEALCYTL  163 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slg~~l  163 (257)
                      +|+||+|+||+++.+   +.++++|||++........   ......++..|+|||.+.     +..++.++|+||+|+++
T Consensus       125 ~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil  198 (282)
T cd06643         125 IHRDLKAGNILFTLD---GDIKLADFGVSAKNTRTIQ---RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL  198 (282)
T ss_pred             eecCCCcccEEEccC---CCEEEcccccccccccccc---ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHH
Confidence            999999999999765   8899999999865433211   113456889999999984     34567899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||.....   ......+.....  .....+..++..+.++|.+||+.+|++||+++++++
T Consensus       199 ~el~~g~~p~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         199 IEMAQIEPPHHELNP---MRVLLKIAKSEP--PTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             HHHccCCCCccccCH---HHHHHHHhhcCC--CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999987432   222222222111  111223567889999999999999999999988764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG4257|consensus

Probab=100.00  E-value=1e-37  Score=259.13  Aligned_cols=218  Identities=18%  Similarity=0.291  Sum_probs=188.5

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ....+.|..|..+++.+. ||||++++|++... ..++|||.+ -|.|.++++.+...++......+++|++.+|+|||+
T Consensus       432 ~d~tekflqEa~iMrnfd-HphIikLIGv~~e~-P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeS  509 (974)
T KOG4257|consen  432 PDDTEKFLQEASIMRNFD-HPHIIKLIGVCVEQ-PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLES  509 (974)
T ss_pred             hhhHHHHHHHHHHHHhCC-Ccchhheeeeeecc-ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh
Confidence            456789999999999998 99999999999865 599999999 999999999888899999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .++|||||..+||++.+.   ..|||+|||+++.......-..  ..-.-+..|||||.++-..++..+|||+|||++||
T Consensus       510 krfVHRDIAaRNiLVsSp---~CVKLaDFGLSR~~ed~~yYka--S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWE  584 (974)
T KOG4257|consen  510 KRFVHRDIAARNILVSSP---QCVKLADFGLSRYLEDDAYYKA--SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWE  584 (974)
T ss_pred             hchhhhhhhhhheeecCc---ceeeecccchhhhccccchhhc--cccccceeecCccccchhcccchhhHHHHHHHHHH
Confidence            999999999999999765   7899999999987655432211  23345678999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      ++. |-.||.+..+.+.--.+++   +    ...+.++.||+.+..++.+||+.+|.+||++.++...|.+++.
T Consensus       585 Il~lGvkPfqgvkNsDVI~~iEn---G----eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  585 ILSLGVKPFQGVKNSDVIGHIEN---G----ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             HHHhcCCccccccccceEEEecC---C----CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            987 9999999887764322222   2    2333448999999999999999999999999999999998887

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.5e-36  Score=243.20  Aligned_cols=215  Identities=16%  Similarity=0.293  Sum_probs=173.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEecc-CCCHHHHHHHh-----cCCCCHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELL-GPSLEDLFQYC-----SKRFSLKTVLMLADQMI   77 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~~~~i~   77 (257)
                      ...+.+|+..++.+. ||||+++++++....      ..++++||+ +++|..++...     ...+++..+..++.|++
T Consensus        45 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~  123 (273)
T cd05035          45 IEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIA  123 (273)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHH
Confidence            346889999999998 999999999876544      379999999 99999988643     24689999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||.|+|+.|++|+||||+||+++.+   +.++|+|||.+............ .....+..|+|||.+.+..++.++|||
T Consensus       124 ~aL~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~Dv~  199 (273)
T cd05035         124 LGMEYLSNRNFIHRDLAARNCMLRED---MTVCVADFGLSKKIYSGDYYRQG-RIAKMPVKWIAIESLADRVYTSKSDVW  199 (273)
T ss_pred             HHHHHHHhCCeeccccchheEEECCC---CeEEECCccceeecccccccccc-ccccCCccccCHhhcccCCCCcccchH
Confidence            99999999999999999999999765   88999999998765433221111 223346789999999888899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       158 slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |||+++|+|++ |..||.....   .+.+..+...    .....+..+++.+.+++.+||+.||++||++.++.+.|+++
T Consensus       200 SlG~il~el~~~g~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         200 AFGVTMWEIATRGQTPYPGVEN---HEIYDYLRHG----NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcC----CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999999998 8999976432   2222332222    12223467889999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-36  Score=242.65  Aligned_cols=214  Identities=17%  Similarity=0.273  Sum_probs=175.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.+++++. ||+|+++++++......+++||++ +++|.+++... ...++...+..++.+++.|+.+||+.
T Consensus        44 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~  122 (261)
T cd05034          44 SPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR  122 (261)
T ss_pred             CHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3567899999999998 999999999999888899999999 99999999854 35789999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++++|||.+.........  .......+..|+|||.+.+...+.++|+||+|++++++
T Consensus       123 ~i~h~di~p~nili~~~---~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l  197 (261)
T cd05034         123 NYIHRDLAARNILVGEN---LVCKIADFGLARLIEDDEYT--AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEI  197 (261)
T ss_pred             CcccCCcchheEEEcCC---CCEEECccccceeccchhhh--hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHH
Confidence            99999999999999876   89999999998765432111  11222345689999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ++ |..||.+...   ...+..+...    .........|..+.+++.+||..+|++||+++++.+.|++
T Consensus       198 ~t~g~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         198 VTYGRVPYPGMTN---REVLEQVERG----YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HhCCCCCCCCCCH---HHHHHHHHcC----CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            98 9999976432   2233332221    1112225678999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=1.3e-36  Score=245.74  Aligned_cols=214  Identities=18%  Similarity=0.278  Sum_probs=171.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------------CCCCHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------------KRFSLK   67 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------------~~~~~~   67 (257)
                      .+.+.+|+.++.++. ||||+++++++..+...++++||+ +++|.+++....                     ..++..
T Consensus        52 ~~~~~~ei~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  130 (288)
T cd05050          52 QADFQREAALMAEFD-HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCT  130 (288)
T ss_pred             HHHHHHHHHHHHhcC-CCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHH
Confidence            456888999999997 999999999999988999999999 899999997431                     246788


Q ss_pred             HHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC
Q psy2769          68 TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW  147 (257)
Q Consensus        68 ~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  147 (257)
                      .+..++.|++.||.++|+.|++|+||+|+||+++.+   +.++++|||.+........... ......+..|+|||.+.+
T Consensus       131 ~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~  206 (288)
T cd05050         131 EQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYYKA-SENDAIPIRWMPPESIFY  206 (288)
T ss_pred             HHHHHHHHHHHHHHHHHhCCeecccccHhheEecCC---CceEECccccceecccCccccc-cCCCccChhhcCHHHHhc
Confidence            899999999999999999999999999999999766   8899999998865433211111 122334567999999998


Q ss_pred             CCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         148 LDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       148 ~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      ..++.++||||||+++|+|++ |..||.+...   .+....+....    .......+|..+.+++.+||+.+|++||++
T Consensus       207 ~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  279 (288)
T cd05050         207 NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH---EEVIYYVRDGN----VLSCPDNCPLELYNLMRLCWSKLPSDRPSF  279 (288)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHhcCC----CCCCCCCCCHHHHHHHHHHcccCcccCCCH
Confidence            889999999999999999997 8889876432   22222222221    112235678999999999999999999999


Q ss_pred             HHHHHHHHH
Q psy2769         227 GKLRDSFRN  235 (257)
Q Consensus       227 ~~~~~~l~~  235 (257)
                      .++.+.|++
T Consensus       280 ~el~~~l~~  288 (288)
T cd05050         280 ASINRILQR  288 (288)
T ss_pred             HHHHHHhhC
Confidence            999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=3.5e-36  Score=240.88  Aligned_cols=216  Identities=19%  Similarity=0.252  Sum_probs=167.6

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS----KRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+|+.++.++. ||||+++++++.+....++||||+ +++|.+++....    ...+...+..++.|++.|+.|||+
T Consensus        40 ~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  118 (269)
T cd05087          40 MKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK  118 (269)
T ss_pred             HHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            36888999999998 999999999999888899999999 899999997531    245677888999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-------CCCCcchHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-------DQSPRDDLEA  158 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-------~~~~~~Dv~s  158 (257)
                      .|++|+||||+||+++.+   +.++|+|||.+.......... ......++..|+|||++.+.       .++.++|+||
T Consensus       119 ~~i~H~dlkp~nil~~~~---~~~kL~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diws  194 (269)
T cd05087         119 NNFIHSDLALRNCLLTAD---LTVKIGDYGLSHNKYKEDYYV-TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWS  194 (269)
T ss_pred             CCEeccccCcceEEEcCC---CcEEECCccccccccCcceee-cCCCcCCcccccCHhHhccccccccccCCCccchhHH
Confidence            999999999999999765   889999999886433221111 11234567889999998643       3478999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         159 LCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       159 lg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      ||+++|+|++ |..||.........  ...+.........+......++.+.+++.+|+ .+|++||+++++...|.
T Consensus       195 lG~~l~el~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         195 LGVTIWELFELGSQPYRHLSDEQVL--TYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHHHHHHHhCCCCCCCCCChHHHH--HHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            9999999996 99999875432221  11122222333333333467888999999999 68999999999997763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.5e-36  Score=255.92  Aligned_cols=216  Identities=19%  Similarity=0.205  Sum_probs=166.6

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeC--------CccEEEEeccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHH
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSG--------DYNILVMELLGPSLEDLFQYC---SKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~--------~~~~~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ...+|+.+++.+. ||||+++++++...        ..+++||||++++|.+++...   ...+++..+..++.|++.||
T Consensus       105 ~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL  183 (440)
T PTZ00036        105 YKNRELLIMKNLN-HINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRAL  183 (440)
T ss_pred             hHHHHHHHHHhcC-CCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Confidence            4567999999998 99999998876432        246799999988888877642   46799999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEAL  159 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~sl  159 (257)
                      +|||+.||+||||||+||+++.+  .+.+||+|||++.......    ......+++.|+|||++.+. .++.++|||||
T Consensus       184 ~yLH~~~IiHrDLKp~NILl~~~--~~~vkL~DFGla~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl  257 (440)
T PTZ00036        184 AYIHSKFICHRDLKPQNLLIDPN--THTLKLCDFGSAKNLLAGQ----RSVSYICSRFYRAPELMLGATNYTTHIDLWSL  257 (440)
T ss_pred             HHHHHCCEecCCcCHHHEEEcCC--CCceeeeccccchhccCCC----CcccCCCCcCccCHHHhcCCCCCCcHHHHHHH
Confidence            99999999999999999999754  2479999999997654322    11345688999999998764 57899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh-----------------C---C----hhhhhcCCcHHHHHHHHHH
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT-----------------M---T----PEAICEGTPPEFAEFLRYC  215 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------~---~----~~~~~~~~~~~~~~li~~~  215 (257)
                      ||++|+|++|.+||.+....+..   ..+.+....                 +   .    ...++...|+++.++|.+|
T Consensus       258 Gvil~elltG~~pf~~~~~~~~~---~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~  334 (440)
T PTZ00036        258 GCIIAEMILGYPIFSGQSSVDQL---VRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQF  334 (440)
T ss_pred             HHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHH
Confidence            99999999999999875433222   222111000                 0   0    0112235778999999999


Q ss_pred             hcCCCCCCCChHHHHH--HHHHHH
Q psy2769         216 RGLAFSEEPNYGKLRD--SFRNLL  237 (257)
Q Consensus       216 l~~~p~~Rp~~~~~~~--~l~~~~  237 (257)
                      |..||.+||++.+++.  .++++.
T Consensus       335 L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        335 LKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             CCCChhHCcCHHHHhCChhHHhhh
Confidence            9999999999999874  555543

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-36  Score=240.08  Aligned_cols=213  Identities=16%  Similarity=0.280  Sum_probs=173.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.+++++. ||+|+++++++......++++|++ +++|.+++......++...+..++.+++.||.+||+.|+
T Consensus        36 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i  114 (251)
T cd05041          36 KRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC  114 (251)
T ss_pred             HHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            457889999999998 999999999999999999999999 999999997655678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+........... ......+..|+|||.+.+..++.++|+||||+++++|++
T Consensus       115 ~h~di~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t  190 (251)
T cd05041         115 IHRDLAARNCLVGEN---NVLKISDFGMSREEEGGIYTVS-DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFS  190 (251)
T ss_pred             ehhhcCcceEEEcCC---CcEEEeeccccccccCCcceec-cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHh
Confidence            999999999999766   8899999999875432211111 012234567999999988888999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                       |..||.........   ..+...    .....+..+|..+.+++.+||..+|++||+++++++.|+
T Consensus       191 ~~~~p~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         191 LGDTPYPGMSNQQTR---ERIESG----YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             ccCCCCccCCHHHHH---HHHhcC----CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence             88999775432221   112111    111223567899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=8.8e-37  Score=254.48  Aligned_cols=210  Identities=18%  Similarity=0.220  Sum_probs=168.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++.++...|+||||+ +++|.+++.  ...+++..+..++.|++.||.+||+.||
T Consensus        87 ~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~--~~~~~~~~~~~~~~qil~aL~~LH~~~I  163 (370)
T cd05621          87 SAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS--NYDVPEKWAKFYTAEVVLALDAIHSMGL  163 (370)
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            345778999999987 999999999999999999999999 999999997  3468999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC----CCCcchHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD----QSPRDDLEALCYTLV  164 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~~~Dv~slg~~l~  164 (257)
                      +||||||+||+++.+   +.+||+|||++........  .......||+.|+|||++.+..    ++.++|+||+|+++|
T Consensus       164 vHrDLKp~NILl~~~---~~~kL~DFG~a~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ily  238 (370)
T cd05621         164 IHRDVKPDNMLLDKH---GHLKLADFGTCMKMDETGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF  238 (370)
T ss_pred             EecCCCHHHEEECCC---CCEEEEecccceecccCCc--eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHH
Confidence            999999999999766   8999999999876543211  1114567999999999997643    678999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCC--CCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE--EPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp~~~~~~~  231 (257)
                      +|++|..||....   ....+..+.........+. ...+++.+.+++..||..++.+  |++++++++
T Consensus       239 ell~G~~Pf~~~~---~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~  303 (370)
T cd05621         239 EMLVGDTPFYADS---LVGTYSKIMDHKNSLNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ  303 (370)
T ss_pred             HHHhCCCCCCCCC---HHHHHHHHHhCCcccCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence            9999999998743   3333344433222222111 1357889999999999755543  789988866

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=2.5e-36  Score=243.99  Aligned_cols=214  Identities=17%  Similarity=0.184  Sum_probs=167.1

Q ss_pred             cccHHHHHHHHHhc--CCCCCcEEEeeeee-----CCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLH--GAPGVPHVMGYGTS-----GDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        11 ~~~~~E~~~~~~l~--~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..+.+|+.+++.++  +||||+++++++..     ....++++|++.++|.+++... ...+++..+..++.|++.||.|
T Consensus        44 ~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~  123 (288)
T cd07863          44 LSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDF  123 (288)
T ss_pred             hHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence            35678999988885  59999999998764     2457999999977999988754 3458999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      +|+.|++|+||||+||+++.+   +.++|+|||++.......    ......++..|+|||++.+..++.++||||+|++
T Consensus       124 lH~~~ivH~dikp~Nili~~~---~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~  196 (288)
T cd07863         124 LHANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSCQM----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI  196 (288)
T ss_pred             HHhCCeecCCCCHHHEEECCC---CCEEECccCccccccCcc----cCCCccccccccCchHhhCCCCCCcchhhhHHHH
Confidence            999999999999999999766   889999999987653321    1134567889999999998889999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHH----Hh---------------hCChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEM----KL---------------TMTPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~---------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      +|+|++|.+||...........+......    ..               ........+.+++.+.+++.+||..||++|
T Consensus       197 l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  276 (288)
T cd07863         197 FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKR  276 (288)
T ss_pred             HHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccC
Confidence            99999999999764333222221111100    00               001122334678889999999999999999


Q ss_pred             CChHHHHH
Q psy2769         224 PNYGKLRD  231 (257)
Q Consensus       224 p~~~~~~~  231 (257)
                      |++.+++.
T Consensus       277 ~t~~~~l~  284 (288)
T cd07863         277 ISAFRALQ  284 (288)
T ss_pred             CCHHHHhc
Confidence            99998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.2e-36  Score=255.88  Aligned_cols=217  Identities=16%  Similarity=0.167  Sum_probs=168.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ...+.+|+.++++|. ||||+++++++..++..+++++++.++|.+++......+++..+..++.|++.||.|||+.||+
T Consensus       204 ~~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv  282 (461)
T PHA03211        204 YASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGII  282 (461)
T ss_pred             ccCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            345779999999998 9999999999999999999999998899998876556799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhC
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      |+||||+||+++.+   +.++|+|||++.......... ......||..|+|||++.+..++.++|||||||++|||++|
T Consensus       283 HrDLKP~NILl~~~---~~vkL~DFGla~~~~~~~~~~-~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g  358 (461)
T PHA03211        283 HRDIKTENVLVNGP---EDICLGDFGAACFARGSWSTP-FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVH  358 (461)
T ss_pred             ECcCCHHHEEECCC---CCEEEcccCCceecccccccc-cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHc
Confidence            99999999999765   789999999987654322111 11345689999999999999999999999999999999998


Q ss_pred             CCCCCCCCCc-----cHHHHHHHHHHHHhh---CC-------------------h-------hhhhcCCcHHHHHHHHHH
Q psy2769         170 KLPWQSIKSD-----NEETRMQRVTEMKLT---MT-------------------P-------EAICEGTPPEFAEFLRYC  215 (257)
Q Consensus       170 ~~p~~~~~~~-----~~~~~~~~~~~~~~~---~~-------------------~-------~~~~~~~~~~~~~li~~~  215 (257)
                      ..|+......     ........+......   +.                   .       -.....++..+.++|.+|
T Consensus       359 ~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~m  438 (461)
T PHA03211        359 TASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRA  438 (461)
T ss_pred             CCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHH
Confidence            7655432211     111111111111100   00                   0       000123556899999999


Q ss_pred             hcCCCCCCCChHHHHH
Q psy2769         216 RGLAFSEEPNYGKLRD  231 (257)
Q Consensus       216 l~~~p~~Rp~~~~~~~  231 (257)
                      |..||++|||+.++++
T Consensus       439 L~~DP~~RPsa~elL~  454 (461)
T PHA03211        439 LTFDGARRPSAAELLR  454 (461)
T ss_pred             cccChhhCcCHHHHhh
Confidence            9999999999999976

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3.7e-36  Score=242.55  Aligned_cols=223  Identities=19%  Similarity=0.174  Sum_probs=169.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.++.++. ||||+++++++..  ....++|+||+ +++|.+++......+++..+..++.|++.||.+||+.
T Consensus        49 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~  127 (284)
T cd05081          49 LRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK  127 (284)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            447889999999998 9999999997643  34689999999 9999999985555689999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++|+||||+++++|
T Consensus       128 ~i~H~dlkp~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  204 (284)
T cd05081         128 RYVHRDLATRNILVESE---NRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL  204 (284)
T ss_pred             CceeccCCHhhEEECCC---CeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHH
Confidence            99999999999999766   889999999987654332211111222344569999999988899999999999999999


Q ss_pred             HhCCCCCCCCCCccH---------HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         167 LRGKLPWQSIKSDNE---------ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      ++|..|+......-.         ......................++..+.+++.+||+.+|++|||+.++.+.|+++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         205 FTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             hhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            998776543221100         0000001000001111122356788999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.3e-36  Score=254.78  Aligned_cols=213  Identities=20%  Similarity=0.226  Sum_probs=167.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++.+....++||||+ +++|.+++.. ...+++..+..++.|++.||.+||+.||
T Consensus        45 ~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~gi  122 (381)
T cd05626          45 VAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMGF  122 (381)
T ss_pred             HHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456889999999998 999999999999999999999999 9999999874 5578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-------------------------------------------
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-------------------------------------------  125 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-------------------------------------------  125 (257)
                      +||||||+||+++.+   +.++|+|||++..+.....                                           
T Consensus       123 vHrDlKp~Nili~~~---~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (381)
T cd05626         123 IHRDIKPDNILIDLD---GHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQ  199 (381)
T ss_pred             eecCCcHHHEEECCC---CCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccc
Confidence            999999999999765   8899999998753311000                                           


Q ss_pred             -CCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCC
Q psy2769         126 -PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT  204 (257)
Q Consensus       126 -~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (257)
                       .........||+.|+|||.+.+..++.++|||||||++|||++|..||......   .....+.........+ ....+
T Consensus       200 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~~-~~~~~  275 (381)
T cd05626         200 HQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPT---ETQLKVINWENTLHIP-PQVKL  275 (381)
T ss_pred             ccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHH---HHHHHHHccccccCCC-CCCCC
Confidence             000012346999999999999888999999999999999999999999874322   2222222211111111 11357


Q ss_pred             cHHHHHHHHHHh--cCCCCCCCChHHHHH
Q psy2769         205 PPEFAEFLRYCR--GLAFSEEPNYGKLRD  231 (257)
Q Consensus       205 ~~~~~~li~~~l--~~~p~~Rp~~~~~~~  231 (257)
                      ++++.++|.+|+  ..++..||+++++++
T Consensus       276 s~~~~dli~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         276 SPEAVDLITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             CHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            899999999955  455556999999976

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.2e-37  Score=255.47  Aligned_cols=212  Identities=21%  Similarity=0.253  Sum_probs=166.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++.+....|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        45 ~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~gi  122 (377)
T cd05629          45 LAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKLGF  122 (377)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456788999999997 999999999999999999999999 9999999874 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC------------CC-----------------------------
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP------------PR-----------------------------  127 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~------------~~-----------------------------  127 (257)
                      +||||||+||+++.+   +.++|+|||++..+.....            ..                             
T Consensus       123 vHrDlkp~NIll~~~---~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (377)
T cd05629         123 IHRDIKPDNILIDRG---GHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKK  199 (377)
T ss_pred             eccCCCHHHEEECCC---CCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh
Confidence            999999999999766   8899999998853321100            00                             


Q ss_pred             ---CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCC
Q psy2769         128 ---IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT  204 (257)
Q Consensus       128 ---~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (257)
                         .......||+.|+|||++.+..++.++||||+||++|+|++|..||.....   ...+..+.........+. ...+
T Consensus       200 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~-~~~~  275 (377)
T cd05629         200 NRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENS---HETYRKIINWRETLYFPD-DIHL  275 (377)
T ss_pred             cccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCH---HHHHHHHHccCCccCCCC-CCCC
Confidence               000124689999999999998899999999999999999999999986432   233333332211111111 1357


Q ss_pred             cHHHHHHHHHHhcCCCCCC---CChHHHHH
Q psy2769         205 PPEFAEFLRYCRGLAFSEE---PNYGKLRD  231 (257)
Q Consensus       205 ~~~~~~li~~~l~~~p~~R---p~~~~~~~  231 (257)
                      +..+.++|.+||. +|.+|   +++.+++.
T Consensus       276 s~~~~dli~~lL~-~~~~r~~r~~~~~~l~  304 (377)
T cd05629         276 SVEAEDLIRRLIT-NAENRLGRGGAHEIKS  304 (377)
T ss_pred             CHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence            8899999999997 77765   58887765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.6e-36  Score=253.11  Aligned_cols=208  Identities=19%  Similarity=0.232  Sum_probs=166.2

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|+.++..+. ||||+++++.+..+...++||||+ +++|.+++.  ...+++..+..++.|++.||.+||++|++
T Consensus        88 ~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~iv  164 (371)
T cd05622          88 AFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSMGFI  164 (371)
T ss_pred             HHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            45678899999887 999999999999999999999999 999999987  35689999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC----CCCcchHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD----QSPRDDLEALCYTLVY  165 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~~~Dv~slg~~l~~  165 (257)
                      ||||||+||+++.+   +.++|+|||++........  .......||+.|+|||++.+..    ++.++|||||||++|+
T Consensus       165 HrDLkp~NIll~~~---~~ikL~DfG~a~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilye  239 (371)
T cd05622         165 HRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE  239 (371)
T ss_pred             eCCCCHHHEEECCC---CCEEEEeCCceeEcCcCCc--ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHH
Confidence            99999999999766   8899999999876543211  1113557999999999997643    6789999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCC---CCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE---EPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~---Rp~~~~~~~  231 (257)
                      |++|..||...   +.......+.........+. ...++..+.++|..||. +|..   |++++++++
T Consensus       240 ll~G~~Pf~~~---~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~  303 (371)
T cd05622         240 MLVGDTPFYAD---SLVGTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLT-DREVRLGRNGVEEIKR  303 (371)
T ss_pred             HHhCCCCCCCC---CHHHHHHHHHcCCCcccCCC-cCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhc
Confidence            99999999873   33333344433222211111 24688999999999997 4444   667777765

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=4.8e-36  Score=239.69  Aligned_cols=209  Identities=20%  Similarity=0.299  Sum_probs=172.1

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|+.+++++. ||||+++++++......++++||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|++
T Consensus        51 ~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~iv  128 (267)
T cd06628          51 DALAREIALLKELQ-HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGII  128 (267)
T ss_pred             HHHHHHHHHHHhcC-CCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            46788999999998 999999999999999999999999 9999999984 46789999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC---CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR---IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |+||+|+||+++.+   +.++|+|||.+..........   .......++..|+|||.+.+..++.++|+||+|+++|+|
T Consensus       129 H~di~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l  205 (267)
T cd06628         129 HRDIKGANILVDNK---GGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEM  205 (267)
T ss_pred             cccCCHHHEEEcCC---CCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHH
Confidence            99999999999766   889999999987664321111   111234578899999999988889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.....   ...+..+..    ...+..+..++..+.+++++||+.+|++||++.++++
T Consensus       206 ~~g~~p~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         206 LTGKHPFPDCTQ---LQAIFKIGE----NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             hhCCCCCCCccH---HHHHHHHhc----cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            999999987432   222222222    1222334678899999999999999999999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0983|consensus

Probab=100.00  E-value=1.3e-37  Score=235.55  Aligned_cols=213  Identities=22%  Similarity=0.382  Sum_probs=179.2

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH-RK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~   86 (257)
                      ...++++..+.++..-.++|+|++.+|+|..+...++.||.|+..+..+++...+.+++.-+.++...+++||.||- ++
T Consensus       132 ee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH  211 (391)
T KOG0983|consen  132 EENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH  211 (391)
T ss_pred             HHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc
Confidence            34567888999999988899999999999999889999999988888888877788999999999999999999995 77


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC---CCCCcchHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL---DQSPRDDLEALCYTL  163 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slg~~l  163 (257)
                      |++|||+||+|||++..   |++|+||||++-.+..+...    ....|.+.|||||.+.-.   .|+.++||||||+++
T Consensus       212 ~viHRDvKPSNILlDe~---GniKlCDFGIsGrlvdSkAh----trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITl  284 (391)
T KOG0983|consen  212 GVIHRDVKPSNILLDER---GNIKLCDFGISGRLVDSKAH----TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITL  284 (391)
T ss_pred             ceeecccCccceEEccC---CCEEeecccccceeeccccc----ccccCCccccCccccCCCCCCccchhhhhhhhccch
Confidence            99999999999999876   99999999998766554322    456799999999998543   578899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +||.||+.||.+++  ...+.+.++.....+..+..  .++++.|.+++..||..|+.+||.+.++++
T Consensus       285 veLaTg~yPy~~c~--tdFe~ltkvln~ePP~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  285 VELATGQYPYKGCK--TDFEVLTKVLNEEPPLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             hhhhcccCCCCCCC--ccHHHHHHHHhcCCCCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            99999999999863  34555555555333333322  459999999999999999999999998875

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=4e-36  Score=241.13  Aligned_cols=206  Identities=17%  Similarity=0.215  Sum_probs=165.6

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ..+.+|+.+++.+. ||||+++++++......++||||+ +++|..++......+++..+..++.|++.||.|||+.|++
T Consensus        61 ~~~~~~~~~~~~l~-h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ii  139 (274)
T cd05076          61 LAFFETASLMSQVS-HIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLV  139 (274)
T ss_pred             HHHHHHHHHHhcCC-CCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCcc
Confidence            46778888998888 999999999999999999999999 9999998875566789999999999999999999999999


Q ss_pred             ccCCCCCceEeeccC----CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRE----NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLV  164 (257)
Q Consensus        90 H~dl~~~nili~~~~----~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~  164 (257)
                      |+||||+||+++.++    ....++++|||.+......       ....++..|+|||.+.+ ..++.++||||||+++|
T Consensus       140 H~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~  212 (274)
T cd05076         140 HGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLL  212 (274)
T ss_pred             CCCCCcccEEEeccCcccCccceeeecCCccccccccc-------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHH
Confidence            999999999997542    2245899999987543221       23456788999998875 45789999999999999


Q ss_pred             HHH-hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         165 YFL-RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       165 ~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      +++ +|..||..........    ........     +...++.+.+++.+||+.+|++||++.++++.|
T Consensus       213 el~~~g~~p~~~~~~~~~~~----~~~~~~~~-----~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         213 EICFDGEVPLKERTPSEKER----FYEKKHRL-----PEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             HHHhCCCCCccccChHHHHH----HHHhccCC-----CCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            985 6999998754322211    11111111     134567799999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-36  Score=248.81  Aligned_cols=213  Identities=19%  Similarity=0.208  Sum_probs=167.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||+|+++++++..+++.|+||||+ +++|.+++......+++..+..++.|++.||.|||++|+
T Consensus        45 ~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (331)
T cd05597          45 TACFREERDVLVNGD-RRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY  123 (331)
T ss_pred             HHHHHHHHHHHHhCC-CCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            445788999999987 999999999999999999999999 999999998656679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----CCCCCcchHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----LDQSPRDDLEALCYTL  163 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~Dv~slg~~l  163 (257)
                      +||||||+||+++.+   +.++|+|||++.........  ......|++.|+|||++..     ..++.++||||+||++
T Consensus       124 vH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l  198 (331)
T cd05597         124 VHRDIKPDNVLLDKN---GHIRLADFGSCLRLLADGTV--QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCM  198 (331)
T ss_pred             EECCCCHHHEEECCC---CCEEEEECCceeecCCCCCc--cccceeccccccCHHHHhhccccccCCCCcceeehhhhHH
Confidence            999999999999766   88999999998765433211  1123468999999999863     3467899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCC--CCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE--EPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp~~~~~~~  231 (257)
                      |+|++|..||....   ..+.+..+.........+.....+|+.+.+++++|+..++++  |++++++++
T Consensus       199 ~el~~g~~Pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~  265 (331)
T cd05597         199 YEMLYGETPFYAES---LVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD  265 (331)
T ss_pred             HHHhhCCCCCCCCC---HHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            99999999998643   223333333222222222223458999999999998654433  678877765

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0196|consensus

Probab=100.00  E-value=4.1e-38  Score=266.87  Aligned_cols=229  Identities=14%  Similarity=0.257  Sum_probs=196.6

Q ss_pred             CCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769           5 PVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         5 ~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ..+..+..|+.|+.|+-++. ||||+++-|+.+......+|+||| .|+|..+++.+.+.|+..++..+++.|+.|+.||
T Consensus       669 ytekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYL  747 (996)
T KOG0196|consen  669 YTEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYL  747 (996)
T ss_pred             ccHHHHhhhhhhhhhcccCC-CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHH
Confidence            33456678999999999998 999999999999999999999999 9999999998888899999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      .++|+|||||..+|||++++   -.+|++|||+++.+.........+..-.-+.+|.|||.+...+.+..+||||+|+++
T Consensus       748 sdm~YVHRDLAARNILVNsn---LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVm  824 (996)
T KOG0196|consen  748 SDMNYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM  824 (996)
T ss_pred             hhcCchhhhhhhhheeeccc---eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEE
Confidence            99999999999999999877   899999999999775554332222233345799999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccc
Q psy2769         164 VYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKER  242 (257)
Q Consensus       164 ~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~  242 (257)
                      ||+++ |+.||=.+.+.+.-+.+...    +..+++   .+||..++.|+..||++|-.+||++.+|+..|.+++.+...
T Consensus       825 WEVmSyGERPYWdmSNQdVIkaIe~g----yRLPpP---mDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~S  897 (996)
T KOG0196|consen  825 WEVMSYGERPYWDMSNQDVIKAIEQG----YRLPPP---MDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNS  897 (996)
T ss_pred             EEecccCCCcccccchHHHHHHHHhc----cCCCCC---CCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchh
Confidence            99887 99999887665544433332    222222   68999999999999999999999999999999999998764


Q ss_pred             cC
Q psy2769         243 CE  244 (257)
Q Consensus       243 ~~  244 (257)
                      .+
T Consensus       898 Lk  899 (996)
T KOG0196|consen  898 LK  899 (996)
T ss_pred             hc
Confidence            43

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=3.9e-36  Score=242.52  Aligned_cols=209  Identities=22%  Similarity=0.261  Sum_probs=171.0

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+.+|+.++.++. |++++.+++.+.+++..|++|||+ +++|.+.+... ...+++..+..++.|++.||.|||+.|+
T Consensus        45 ~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05630          45 SMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI  123 (285)
T ss_pred             HHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            35678999999997 999999999999999999999999 99999988643 3468999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.......    ......++..|+|||.+.+..++.++|+||+|+++|+|++
T Consensus       124 iH~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~  196 (285)
T cd05630         124 VYRDLKPENILLDDH---GHIRISDLGLAVHVPEGQ----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA  196 (285)
T ss_pred             EeCCCCHHHEEECCC---CCEEEeeccceeecCCCc----cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHh
Confidence            999999999999765   789999999886543221    1133468999999999998889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-----hHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-----YGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~~~  231 (257)
                      |..||...................    .......+++.+.+++.+||+.||++||+     ++++++
T Consensus       197 g~~Pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         197 GQSPFQQRKKKIKREEVERLVKEV----QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             CCCCCCCCCccchHHHHHhhhhhh----hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            999998754432222222221111    11233568899999999999999999999     677765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=3.4e-36  Score=242.72  Aligned_cols=213  Identities=16%  Similarity=0.156  Sum_probs=168.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ...+.+|+.+++++. ||||+++++++.+....++++||++++|.+.+......+++..+..++.|++.||.+||+.|++
T Consensus        43 ~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~  121 (284)
T cd07839          43 PSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVL  121 (284)
T ss_pred             ccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence            356788999999998 9999999999999999999999998899988875566799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||++.........   .....++..|+|||.+.+.. ++.++||||+|+++|+|++
T Consensus       122 H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~t  195 (284)
T cd07839         122 HRDLKPQNLLINKN---GELKLADFGLARAFGIPVRC---YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN  195 (284)
T ss_pred             cCCCCHHHEEEcCC---CcEEECccchhhccCCCCCC---cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHh
Confidence            99999999999866   88999999998755332211   13345788999999987654 6889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhh------------------------CChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLT------------------------MTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |..|+.....  ..+.+..+......                        .......+.+++.+.++|++||+.||.+||
T Consensus       196 g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~  273 (284)
T cd07839         196 AGRPLFPGND--VDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRI  273 (284)
T ss_pred             cCCCCcCCCC--HHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcC
Confidence            9888654322  22222222111000                        000112245788999999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      |++++++
T Consensus       274 t~~~il~  280 (284)
T cd07839         274 SAEEALQ  280 (284)
T ss_pred             CHHHHhc
Confidence            9998865

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.1e-36  Score=255.43  Aligned_cols=212  Identities=19%  Similarity=0.230  Sum_probs=167.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||+|+++++.+.++...|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.||
T Consensus        45 ~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~~~i  122 (382)
T cd05625          45 VAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHKMGF  122 (382)
T ss_pred             HHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456888999999998 999999999999999999999999 9999999874 4578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-------------------------------------------
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-------------------------------------------  125 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-------------------------------------------  125 (257)
                      +||||||+||+++.+   +.++|+|||++..+.....                                           
T Consensus       123 vHrDlKp~NILl~~~---g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (382)
T cd05625         123 IHRDIKPDNILIDRD---GHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQ  199 (382)
T ss_pred             ecCCCCHHHEEECCC---CCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence            999999999999766   8999999998753321000                                           


Q ss_pred             -CCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCC
Q psy2769         126 -PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT  204 (257)
Q Consensus       126 -~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (257)
                       .........||+.|+|||++.+..++.++||||+||++|+|++|..||.....   .+....+.........+ ....+
T Consensus       200 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~p-~~~~~  275 (382)
T cd05625         200 HQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTP---LETQMKVINWQTSLHIP-PQAKL  275 (382)
T ss_pred             cccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCH---HHHHHHHHccCCCcCCC-CcccC
Confidence             00001234689999999999998999999999999999999999999987432   22222222211111111 11467


Q ss_pred             cHHHHHHHHHHhcCCCCCCCC---hHHHHH
Q psy2769         205 PPEFAEFLRYCRGLAFSEEPN---YGKLRD  231 (257)
Q Consensus       205 ~~~~~~li~~~l~~~p~~Rp~---~~~~~~  231 (257)
                      ++.+.++|.+|+ .+|.+|++   ++++++
T Consensus       276 s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         276 SPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             CHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            899999999986 69999997   666653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=5.3e-36  Score=239.70  Aligned_cols=217  Identities=14%  Similarity=0.195  Sum_probs=167.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..+.+.+|+.++..+. ||||+++++.+......+++|||+ +++|.+++...   ....+...+..++.|++.||.|||
T Consensus        38 ~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH  116 (268)
T cd05086          38 EQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH  116 (268)
T ss_pred             HHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence            3457889999999997 999999999999988999999999 89999999753   234667788899999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-------CCCCCcchHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-------LDQSPRDDLE  157 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-------~~~~~~~Dv~  157 (257)
                      +.+++|+||||+||+++.+   +.++|+|||++......... .......++..|+|||++..       ..++.++|||
T Consensus       117 ~~~i~H~dikp~nil~~~~---~~~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diw  192 (268)
T cd05086         117 KHNFLHSDLALRNCFLTSD---LTVKVGDYGIGPSRYKEDYI-ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVW  192 (268)
T ss_pred             HCCeeccCCccceEEEcCC---ccEEecccccccccCcchhh-hcccCCcCcccccCchhcccccCccccCCCCCcchhH
Confidence            9999999999999999766   88999999987532211111 11133457889999999753       2346789999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHH-HHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         158 ALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVT-EMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       158 slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |||+++|+|++ |..||......   +.+..+. ........+.....+++.+.+++..|| .+|++||+++++.+.|.
T Consensus       193 slG~~l~el~~~~~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         193 ALGVTLWELFENAAQPYSHLSDR---EVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            99999999997 57788764332   2222222 222223334444668889999999999 78999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=3.4e-36  Score=241.91  Aligned_cols=207  Identities=22%  Similarity=0.305  Sum_probs=172.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||+|+++++++..+...++||||+ +++|.+++.  ...++...+..++.|++.||.++|+.++
T Consensus        46 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~~~l~~lh~~~i  122 (277)
T cd06640          46 IEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEKK  122 (277)
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            457888999999997 999999999999999999999999 999999887  4578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||.+........   ......++..|+|||.+.+...+.++|+||||+++|+|++
T Consensus       123 vH~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~t  196 (277)
T cd06640         123 IHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK  196 (277)
T ss_pred             cCcCCChhhEEEcCC---CCEEEcccccceeccCCcc---ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHH
Confidence            999999999999866   7899999999876543321   1133457888999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      |..||.......   ....+    .....+.....+|..+.+++.+||..+|++||++.+++..
T Consensus       197 g~~p~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         197 GEPPNSDMHPMR---VLFLI----PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             CCCCCCCcChHh---Hhhhh----hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            999998753322   11111    1112233345678899999999999999999999999664

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.7e-36  Score=245.92  Aligned_cols=208  Identities=21%  Similarity=0.320  Sum_probs=170.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. |||++++++.+......|+|+||+ +++|.+++.  ...++..++..++.|++.||.+||+.|+
T Consensus        61 ~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL~~LH~~gi  137 (296)
T cd06654          61 KELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQV  137 (296)
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            456888999999987 999999999999999999999999 999999887  4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.........   .....+++.|+|||.+.+...+.++|+||||+++|+|++
T Consensus       138 ~H~dLkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~  211 (296)
T cd06654         138 IHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE  211 (296)
T ss_pred             ccCCCCHHHEEEcCC---CCEEECccccchhccccccc---cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHh
Confidence            999999999999765   78999999987654332111   133468889999999998888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||......   ........  ...........+++.+.+++.+||..+|++||++.++++
T Consensus       212 g~~pf~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         212 GEPPYLNENPL---RALYLIAT--NGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             CCCCCCCCCHH---HhHHHHhc--CCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            99999764321   11111111  111111223567889999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.4e-36  Score=242.87  Aligned_cols=212  Identities=17%  Similarity=0.185  Sum_probs=168.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++.++. ||||+++++++...+..++|+||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        50 ~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  127 (267)
T cd06646          50 FSLIQQEIFMVKECK-HCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSKGK  127 (267)
T ss_pred             HHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            345788999999998 999999999999999999999999 8999998874 4578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~  165 (257)
                      +|+|++|+||+++.+   +.++|+|||++........   ......++..|+|||.+.   ....+.++|+||+|+++|+
T Consensus       128 ~H~dl~p~nill~~~---~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~e  201 (267)
T cd06646         128 MHRDIKGANILLTDN---GDVKLADFGVAAKITATIA---KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIE  201 (267)
T ss_pred             cccCCCHHHEEECCC---CCEEECcCccceeeccccc---ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHH
Confidence            999999999999765   7899999999876543211   113346788999999985   3346789999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      |++|..||........   ...+...............++..+.+++++||..+|++||+++++++.
T Consensus       202 l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         202 LAELQPPMFDLHPMRA---LFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             HHhCCCCccccchhhh---heeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            9999999976432211   111111111111111124578899999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=2.3e-36  Score=243.21  Aligned_cols=218  Identities=16%  Similarity=0.245  Sum_probs=175.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYCS-------KRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~~-------~~~~~~~~~~~~~~i~~~l   80 (257)
                      .+.+.+|+.+++++. ||||+++++++.. ....+++++++ +++|.+++....       ..++...+..++.|++.||
T Consensus        52 ~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l  130 (280)
T cd05043          52 VTLLLQESCLLYGLS-HQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGM  130 (280)
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence            456888999999997 9999999998765 46789999999 899999987532       4588999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .|||+.+++|+||+|+||+++.+   +.++++|||++..+......... ....++..|+|||.+.+..++.++||||||
T Consensus       131 ~~LH~~~i~H~di~p~nil~~~~---~~~kl~d~g~~~~~~~~~~~~~~-~~~~~~~~y~apE~~~~~~~~~~~Di~slG  206 (280)
T cd05043         131 SYLHKRGVIHKDIAARNCVIDEE---LQVKITDNALSRDLFPMDYHCLG-DNENRPVKWMALESLVNKEYSSASDVWSFG  206 (280)
T ss_pred             HHHHHCCEeecccCHhhEEEcCC---CcEEECCCCCcccccCCceEEeC-CCCCcchhccCHHHHhcCCCCchhhHHHhH
Confidence            99999999999999999999766   88999999998755332211111 223456789999999988899999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         161 YTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       161 ~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      +++|++++ |..||.....   ......+... .   .......+|+.+.+++.+||..+|++||++.++++.|+++.+.
T Consensus       207 ~~l~el~~~g~~p~~~~~~---~~~~~~~~~~-~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         207 VLLWELMTLGQTPYVEIDP---FEMAAYLKDG-Y---RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             HHHHHHhcCCCCCcCcCCH---HHHHHHHHcC-C---CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            99999998 9999987432   2222222211 1   1112246789999999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=7.5e-37  Score=255.94  Aligned_cols=213  Identities=19%  Similarity=0.217  Sum_probs=168.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++..+. ||+|+++++.+..++..|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|
T Consensus        44 ~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (376)
T cd05598          44 QAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMG  121 (376)
T ss_pred             hHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456888999999998 999999999999999999999999 9999999984 456899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC----------------------------------------CC
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP----------------------------------------PR  127 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~----------------------------------------~~  127 (257)
                      |+||||||+||+++.+   +.++|+|||++..+.....                                        ..
T Consensus       122 ivHrDlkp~Nill~~~---~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (376)
T cd05598         122 FIHRDIKPDNILIDRD---GHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQR  198 (376)
T ss_pred             eEeCCCCHHHEEECCC---CCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhccc
Confidence            9999999999999766   8899999998753311000                                        00


Q ss_pred             CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHH
Q psy2769         128 IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPE  207 (257)
Q Consensus       128 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (257)
                      .......|++.|+|||++.+..++.++|||||||++|+|++|..||......   +....+.........+ ....+++.
T Consensus       199 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~~i~~~~~~~~~~-~~~~~s~~  274 (376)
T cd05598         199 CLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPA---ETQLKVINWETTLHIP-SQAKLSRE  274 (376)
T ss_pred             ccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHH---HHHHHHhccCccccCC-CCCCCCHH
Confidence            0011346899999999999989999999999999999999999999875332   2222222211111111 11457889


Q ss_pred             HHHHHHHHhcCCCCCCC---ChHHHHH
Q psy2769         208 FAEFLRYCRGLAFSEEP---NYGKLRD  231 (257)
Q Consensus       208 ~~~li~~~l~~~p~~Rp---~~~~~~~  231 (257)
                      +.++|.+|+ .+|.+|+   +++++++
T Consensus       275 ~~~li~~l~-~~p~~R~~~~t~~ell~  300 (376)
T cd05598         275 ASDLILRLC-CGAEDRLGKNGADEIKA  300 (376)
T ss_pred             HHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence            999999987 5999999   7777764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=3.4e-36  Score=239.74  Aligned_cols=213  Identities=16%  Similarity=0.271  Sum_probs=173.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.+++++. |++|+++++.+.. ...+++|||+ +++|.+++... ...++...+..++.|++.||.+||+.
T Consensus        44 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~  121 (260)
T cd05073          44 SVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR  121 (260)
T ss_pred             HHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            3467889999999998 9999999999887 6789999999 89999999853 44678889999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+..+.......  .....++..|+|||.+.+..++.++|+||||++++++
T Consensus       122 ~i~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l  196 (260)
T cd05073         122 NYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTA--REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI  196 (260)
T ss_pred             CccccccCcceEEEcCC---CcEEECCCcceeeccCCCccc--ccCCcccccccCHhHhccCCcCccccchHHHHHHHHH
Confidence            99999999999999765   899999999987654332111  1223456779999999988889999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ++ |..||.......   ....+...    .........+..+.+++.+||+.+|++||+++++.+.|+.
T Consensus       197 ~t~g~~p~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         197 VTYGRIPYPGMSNPE---VIRALERG----YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HhcCCCCCCCCCHHH---HHHHHhCC----CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            98 999998743322   22222211    1112235688899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.8e-36  Score=259.52  Aligned_cols=210  Identities=21%  Similarity=0.227  Sum_probs=171.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC--------ccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD--------YNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMI   77 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~--------~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~   77 (257)
                      ...+.+|+.++..+. |++++++++.+....        ..++||||+ +++|.+.+...   ...+++..+..++.|++
T Consensus        75 ~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll  153 (496)
T PTZ00283         75 KNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVL  153 (496)
T ss_pred             HHHHHHHHHHHhcCC-CCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence            456788999999998 999999988765432        368999999 99999998753   35689999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||.|+|+.|++||||||+||+++.+   +.++|+|||++.......... ......|++.|+|||.+.+..++.++|||
T Consensus       154 ~aL~~lH~~~IiHrDLKP~NILl~~~---~~vkL~DFGls~~~~~~~~~~-~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVw  229 (496)
T PTZ00283        154 LAVHHVHSKHMIHRDIKSANILLCSN---GLVKLGDFGFSKMYAATVSDD-VGRTFCGTPYYVAPEIWRRKPYSKKADMF  229 (496)
T ss_pred             HHHHHHHhCCEecCCCCHHHEEEeCC---CCEEEEecccCeecccccccc-ccccccCCcceeCHHHhCCCCCCcHHHHH
Confidence            99999999999999999999999876   889999999987654332211 11456789999999999998999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |||+++|+|++|..||...   +....+..+...    .....+..+++.+.+++.+||+.||.+||++.++++
T Consensus       230 SlGvilyeLltG~~Pf~~~---~~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        230 SLGVLLYELLTLKRPFDGE---NMEEVMHKTLAG----RYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             HHHHHHHHHHHCCCCCCCC---CHHHHHHHHhcC----CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            9999999999999999863   222222222221    222334678999999999999999999999999875

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=3.5e-36  Score=251.56  Aligned_cols=215  Identities=17%  Similarity=0.168  Sum_probs=168.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-----ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-----YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-----~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..++.+|+.++..++ ||||+++++++....     ..|+|+||++++|.+.+.. ...++...+..++.|++.||.|||
T Consensus        43 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH  120 (372)
T cd07853          43 CKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLH  120 (372)
T ss_pred             HHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccceEEEEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence            356889999999998 999999999998765     7899999998888888763 567999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTL  163 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l  163 (257)
                      +.|++|+||||+||+++.+   +.++|+|||++.........  ......++..|+|||.+.+. .++.++||||+||++
T Consensus       121 ~~~ivH~dlkp~Nili~~~---~~~kL~Dfg~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  195 (372)
T cd07853         121 SAGILHRDIKPGNLLVNSN---CVLKICDFGLARVEEPDESK--HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIF  195 (372)
T ss_pred             hCCeeCCCCChHHEEECCC---CCEEeccccceeecccCccc--cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHH
Confidence            9999999999999999866   89999999998764332211  11334678899999999875 468899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHH----------------H--HhhCChh------hhhcCCcHHHHHHHHHHhcCC
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTE----------------M--KLTMTPE------AICEGTPPEFAEFLRYCRGLA  219 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~----------------~--~~~~~~~------~~~~~~~~~~~~li~~~l~~~  219 (257)
                      |+|++|+.||.+.........+.....                .  ......+      ......++.+.++|.+||..|
T Consensus       196 ~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d  275 (372)
T cd07853         196 AELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFD  275 (372)
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCC
Confidence            999999999987543322221111000                0  0000000      112346788999999999999


Q ss_pred             CCCCCChHHHHH
Q psy2769         220 FSEEPNYGKLRD  231 (257)
Q Consensus       220 p~~Rp~~~~~~~  231 (257)
                      |++||+++++++
T Consensus       276 P~~R~t~~e~l~  287 (372)
T cd07853         276 PDKRISAADALA  287 (372)
T ss_pred             hhhCcCHHHHhc
Confidence            999999999875

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0574|consensus

Probab=100.00  E-value=1.6e-38  Score=243.80  Aligned_cols=219  Identities=21%  Similarity=0.259  Sum_probs=184.5

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISR   79 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~   79 (257)
                      ||..+++...+++.+|+.+++++. .|+++++||.+-...-+++||||| .|++.+.++.+++.++++++..+++..+.|
T Consensus        63 IK~VPV~sDLQEIIKEISIMQQC~-S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKG  141 (502)
T KOG0574|consen   63 IKKVPVDTDLQEIIKEISIMQQCK-SKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKG  141 (502)
T ss_pred             EEecCccchHHHHHHHHHHHHHcC-CchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhH
Confidence            466777888999999999999999 999999999777777799999999 899999999889999999999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEAL  159 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~sl  159 (257)
                      |.|||...=+|||||..||+++.+   |..||.|||.+-.+.......   .+..||+.|+|||++..-.|+.++|||||
T Consensus       142 L~YLH~~~KIHRDIKAGNILLNT~---G~AKLADFGVAGQLTDTMAKR---NTVIGTPFWMAPEVI~EIGY~~~ADIWSL  215 (502)
T KOG0574|consen  142 LQYLHDLKKIHRDIKAGNILLNTD---GIAKLADFGVAGQLTDTMAKR---NTVIGTPFWMAPEVIEEIGYDTKADIWSL  215 (502)
T ss_pred             HHHHHHHHHHHhhcccccEEEccc---chhhhhhccccchhhhhHHhh---CccccCcccccHHHHHHhccchhhhHhhh
Confidence            999999999999999999999877   999999999986654433222   56689999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++..||..|++||....+-..   +.-+  ...+.+....+..++.+|.+++++||-.+|++|-|+.++.+
T Consensus       216 GITaIEMAEG~PPYsDIHPMRA---IFMI--PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  216 GITAIEMAEGRPPYSDIHPMRA---IFMI--PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             cchhhhhhcCCCCcccccccce---eEec--cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            9999999999999998543211   1100  01111122223568889999999999999999999988865

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=3.9e-36  Score=240.23  Aligned_cols=210  Identities=18%  Similarity=0.191  Sum_probs=167.6

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ..+.+|+.+++.+. ||||+++++.+...+..++++||+ +++|.+++.. .+.+++.++..++.|++.|+.|||+.|++
T Consensus        51 ~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  128 (267)
T cd06645          51 AVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSKGKM  128 (267)
T ss_pred             HHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            45778999999997 999999999999999999999999 8999998874 56799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |+||+|+||+++.+   +.++|+|||.+........   ......++..|+|||.+.   ...++.++|+||+||++|+|
T Consensus       129 H~dlkp~nili~~~---~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l  202 (267)
T cd06645         129 HRDIKGANILLTDN---GHVKLADFGVSAQITATIA---KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIEL  202 (267)
T ss_pred             cCCCCHHHEEECCC---CCEEECcceeeeEccCccc---ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHH
Confidence            99999999999765   8899999999876543211   113456889999999974   44578899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.......   ....................++..+.+++.+||+.+|++||+++++++
T Consensus       203 ~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         203 AELQPPMFDLHPMR---ALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             hcCCCCcccccchh---hHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            99999997643221   111111111111111111357888999999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=5.2e-36  Score=238.33  Aligned_cols=206  Identities=17%  Similarity=0.204  Sum_probs=166.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++.. ...++|+||+ +++|.+++......++...+..++.|++.||.|||+.|+
T Consensus        45 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  122 (259)
T cd05037          45 SLAFFETASLMSQLS-HKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKL  122 (259)
T ss_pred             HHHHHHHHHHHHcCC-CcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            567889999999997 9999999999887 6789999999 999999998655478999999999999999999999999


Q ss_pred             cccCCCCCceEeeccC----CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC--CCCCcchHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRE----NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL--DQSPRDDLEALCYT  162 (257)
Q Consensus        89 ~H~dl~~~nili~~~~----~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slg~~  162 (257)
                      +|+||||+||+++.+.    ....++++|||++......       ....++..|+|||.+.+.  .++.++|+||+|++
T Consensus       123 ~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~  195 (259)
T cd05037         123 VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR-------EERVERIPWIAPECIRNGQASLTIAADKWSFGTT  195 (259)
T ss_pred             ecccCccceEEEecCccccCCceeEEeCCCCcccccccc-------cccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence            9999999999998763    1227999999998764331       344567789999999877  67899999999999


Q ss_pred             HHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         163 LVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       163 l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      +|++++ |..||...........   . .......     ......+.+++.+||..+|++||++.++++.|
T Consensus       196 ~~~l~~~~~~p~~~~~~~~~~~~---~-~~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         196 LLEICSNGEEPLSTLSSSEKERF---Y-QDQHRLP-----MPDCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHHHHhCCCCCcccCCchhHHHH---H-hcCCCCC-----CCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            999998 6888877542221111   1 1111111     22236799999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=6.6e-36  Score=244.71  Aligned_cols=221  Identities=15%  Similarity=0.133  Sum_probs=164.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEeccCCCHHHHHHHh--------cCCCCHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELLGPSLEDLFQYC--------SKRFSLKTVLMLADQMISR   79 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~i~~~   79 (257)
                      ...+.+|+.++.++. ||||+++++++..  +...++++||++++|.+++...        ...+++..+..++.|++.|
T Consensus        42 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~a  120 (317)
T cd07867          42 SMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDG  120 (317)
T ss_pred             cHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHH
Confidence            346789999999998 9999999998853  4578999999988998888632        1248889999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeecc-CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLE  157 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~-~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~  157 (257)
                      |.|||+.|++|+||||+||++..+ ..++.++|+|||++.................+++.|+|||.+.+. .++.++|||
T Consensus       121 L~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw  200 (317)
T cd07867         121 IHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIW  200 (317)
T ss_pred             HHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHH
Confidence            999999999999999999999543 234789999999997665433222222445788999999999764 478899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccH------HHHHHHHHHH---------------------HhhC-----C-------hh
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNE------ETRMQRVTEM---------------------KLTM-----T-------PE  198 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~------~~~~~~~~~~---------------------~~~~-----~-------~~  198 (257)
                      |+|+++|+|++|.+||........      ...+..+...                     ....     .       .+
T Consensus       201 SlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (317)
T cd07867         201 AIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYME  280 (317)
T ss_pred             hHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhh
Confidence            999999999999999975332110      0001000000                     0000     0       00


Q ss_pred             hhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         199 AICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       199 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ......+..+.+++.+||..||.+|||++++++
T Consensus       281 ~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         281 KHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             cccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence            001123556889999999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-36  Score=243.05  Aligned_cols=210  Identities=16%  Similarity=0.259  Sum_probs=170.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++.+......++||||+ +++|.+++......+++..+..++.|++.||.+||+.|+
T Consensus        46 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i  124 (280)
T cd06611          46 LEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV  124 (280)
T ss_pred             HHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            456888999999998 999999999999999999999999 999999988666779999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcchHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDDLEALCYTL  163 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slg~~l  163 (257)
                      +|+||+|+||+++.+   +.++|+|||.+........   ......+++.|+|||.+.     ...++.++|+||+|+++
T Consensus       125 ~h~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il  198 (280)
T cd06611         125 IHRDLKAGNILLTLD---GDVKLADFGVSAKNKSTLQ---KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITL  198 (280)
T ss_pred             ccCCCChhhEEECCC---CCEEEccCccchhhccccc---ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHH
Confidence            999999999999766   8899999998765433211   113346788999999985     33467799999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||.....   ...+..+.....  ........++..+.+++.+||+.+|++||+++++++
T Consensus       199 ~~l~~g~~p~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         199 IELAQMEPPHHELNP---MRVLLKILKSEP--PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             HHHHhCCCCcccCCH---HHHHHHHhcCCC--CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence            999999999987432   222222222111  111123568889999999999999999999999865

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=8.2e-36  Score=236.91  Aligned_cols=209  Identities=19%  Similarity=0.201  Sum_probs=174.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+|+.+++++. |+||+++++++......+++|||+ +++|.+.+... ...++...+..++.|++.||.+||+.|
T Consensus        43 ~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08221          43 RRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG  121 (256)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456889999999997 999999999999999999999999 99999999854 456899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+........   ......+++.|+|||...+...+.++|+||+|+++++|+
T Consensus       122 i~h~dl~p~ni~~~~~---~~~kl~d~~~~~~~~~~~~---~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~  195 (256)
T cd08221         122 ILHRDIKTLNIFLTKA---GLIKLGDFGISKILGSEYS---MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELL  195 (256)
T ss_pred             ccccCCChHhEEEeCC---CCEEECcCcceEEcccccc---cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHH
Confidence            9999999999999866   7899999999876544321   113456889999999998888889999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +|..||...   +..+....+....    .......++..+.+++.+||..+|++||++.++++.
T Consensus       196 ~g~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         196 TLKRTFDAT---NPLNLVVKIVQGN----YTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HCCCCCCCC---CHHHHHHHHHcCC----CCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            999999763   2333333332222    122225678999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.3e-36  Score=238.39  Aligned_cols=207  Identities=17%  Similarity=0.215  Sum_probs=166.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++.+. |||++++++++..+...++||||+ +++|.+++......+++..+..++.|++.||.|||+.|+
T Consensus        43 ~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (258)
T cd05078          43 SESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGL  121 (258)
T ss_pred             HHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            356788999999997 999999999999988999999999 999999998655578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCC-----CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVREN-----FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYT  162 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~-----~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~  162 (257)
                      +|+||||+||+++.++.     .+.++++|||.+......       ....++..|+|||.+.+. .++.++|+||+|++
T Consensus       122 iH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~  194 (258)
T cd05078         122 THGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK-------EILLERIPWVPPECIENPQNLSLAADKWSFGTT  194 (258)
T ss_pred             ecCCCccceEEEecccccccCCCceEEecccccccccCCc-------hhccccCCccCchhccCCCCCCchhhHHHHHHH
Confidence            99999999999986521     134799999987654321       334577889999999874 46889999999999


Q ss_pred             HHHHHhC-CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         163 LVYFLRG-KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       163 l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      +|+|++| ..||.......   .. .....     ....+...+..+.+++.+||+.+|++||+++++++.|
T Consensus       195 l~~l~~g~~~~~~~~~~~~---~~-~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         195 LWEIFSGGDKPLSALDSQK---KL-QFYED-----RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             HHHHHcCCCCChhhccHHH---HH-HHHHc-----cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            9999998 56665532221   11 11111     1122245667899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=3.1e-36  Score=250.75  Aligned_cols=212  Identities=17%  Similarity=0.215  Sum_probs=163.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ....+.+|+.+++.+. ||||+++++++....      ..|++|||++++|.+.+.   ..++...+..++.|++.||.|
T Consensus        63 ~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~  138 (359)
T cd07876          63 HAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGIKH  138 (359)
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHh---ccCCHHHHHHHHHHHHHHHHH
Confidence            3456788999999998 999999999886543      479999999778877765   358899999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ||+.|++||||||+||+++.+   +.++|+|||++.......    ......++..|+|||.+.+..++.++||||+|++
T Consensus       139 LH~~~ivHrDlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i  211 (359)
T cd07876         139 LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTACTNF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI  211 (359)
T ss_pred             HHhCCcccCCCCHHHEEECCC---CCEEEecCCCccccccCc----cCCCCcccCCCCCchhccCCCCCcchhhHHHHHH
Confidence            999999999999999999866   899999999986543221    1134578899999999999899999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHH----------------H---HHHhhCC---hh------------hhhcCCcHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRV----------------T---EMKLTMT---PE------------AICEGTPPEF  208 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~----------------~---~~~~~~~---~~------------~~~~~~~~~~  208 (257)
                      +|+|++|..||.+....+....+...                .   .......   ..            ......++.+
T Consensus       212 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (359)
T cd07876         212 MGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQA  291 (359)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhH
Confidence            99999999999875432211111000                0   0000000   00            0011245678


Q ss_pred             HHHHHHHhcCCCCCCCChHHHHH
Q psy2769         209 AEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       209 ~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .++|.+||..||++|||+.++++
T Consensus       292 ~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         292 RDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             HHHHHHHhccCcccCCCHHHHhc
Confidence            99999999999999999999977

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=3.4e-36  Score=244.17  Aligned_cols=209  Identities=22%  Similarity=0.343  Sum_probs=171.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. |||++++++++......++|+||+ +++|.+++.  ...+++.++..++.|++.|+.+||+.|
T Consensus        59 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~~  135 (296)
T cd06655          59 KKELIINEILVMKELK-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVT--ETCMDEAQIAAVCRECLQALEFLHANQ  135 (296)
T ss_pred             hHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEEEEEecCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3457888999999998 999999999999999999999999 999999887  456899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||++.........   .....++..|+|||.+.+..++.++|+||||+++|+++
T Consensus       136 i~H~dL~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ll  209 (296)
T cd06655         136 VIHRDIKSDNVLLGMD---GSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMV  209 (296)
T ss_pred             cccCCCCHHHEEECCC---CCEEEccCccchhccccccc---CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999765   88999999987755433211   13346788999999999888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||......   .....+...  ..........+++.+.++|.+||..+|++||++.+++.
T Consensus       210 tg~~pf~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         210 EGEPPYLNENPL---RALYLIATN--GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             hCCCCCCCCCHH---HHHHHHHhc--CCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            999999874322   222222111  11111223568899999999999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-37  Score=251.21  Aligned_cols=201  Identities=20%  Similarity=0.197  Sum_probs=162.4

Q ss_pred             ccHHHHHHHHHhc--CCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          12 RLFWERNFYEKLH--GAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        12 ~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ....|..++..+.  +||+|+.+++.+......++||||+ +++|.+.+.. ...+++..+..++.|++.||+|||+.|+
T Consensus        39 ~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~i  117 (330)
T cd05586          39 HTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDI  117 (330)
T ss_pred             HHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3455777777664  6999999999999999999999999 9999988874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||||+||+++.+   +.++|+|||++........   ......|+..|+|||.+.+. .++.++||||+||++|+|+
T Consensus       118 vHrDlkp~Nili~~~---~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ell  191 (330)
T cd05586         118 VYRDLKPENILLDAT---GHIALCDFGLSKANLTDNK---TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMC  191 (330)
T ss_pred             EeccCCHHHeEECCC---CCEEEecCCcCcCCCCCCC---CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEec
Confidence            999999999999766   8899999999865322211   11445689999999998764 4789999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      +|..||...   +....+..+.........    ..+++.+.+++++||..||++||++
T Consensus       192 tG~~Pf~~~---~~~~~~~~i~~~~~~~~~----~~~~~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         192 CGWSPFYAE---DTQQMYRNIAFGKVRFPK----NVLSDEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             cCCCCCCCC---CHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCCHHHCCCC
Confidence            999999863   333333333332222211    3478899999999999999999953

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=5.8e-36  Score=237.79  Aligned_cols=211  Identities=17%  Similarity=0.246  Sum_probs=171.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+++++++. ||+++++++++......++++||+ +++|.+++......+++..+..++.|++.|+++||+.|+
T Consensus        43 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i  121 (256)
T cd05112          43 EEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV  121 (256)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            457899999999998 999999999999988999999999 999999998555568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.........  .......+..|+|||.+.+..++.++|+||+|+++|++++
T Consensus       122 ~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~  196 (256)
T cd05112         122 IHRDLAARNCLVGEN---QVVKVSDFGMTRFVLDDQYT--SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFS  196 (256)
T ss_pred             cccccccceEEEcCC---CeEEECCCcceeecccCccc--ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHc
Confidence            999999999999765   78999999988765332111  1122334568999999998888999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                       |..||....   .......+......    ......+..+.+++.+||+.+|++||+++++++.|
T Consensus       197 ~g~~p~~~~~---~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         197 EGKTPYENRS---NSEVVETINAGFRL----YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             CCCCCCCcCC---HHHHHHHHhCCCCC----CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence             999998633   22222222211111    11244688999999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=7e-36  Score=240.94  Aligned_cols=215  Identities=16%  Similarity=0.157  Sum_probs=167.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC--SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+|+.++.++. ||||+++++++..+...++||||+.++|.+++...  +..+++..+..++.|++.||.|||+.|
T Consensus        43 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~  121 (285)
T cd07861          43 PSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR  121 (285)
T ss_pred             hHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            356889999999998 99999999999999999999999977898888753  256899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||+|+||+++.+   +.++|+|||++.........   .....+++.|+|||.+.+. .++.++|+||||+++++|
T Consensus       122 i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l  195 (285)
T cd07861         122 VLHRDLKPQNLLIDNK---GVIKLADFGLARAFGIPVRV---YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEM  195 (285)
T ss_pred             eeecCCCHHHEEEcCC---CcEEECcccceeecCCCccc---ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHH
Confidence            9999999999999766   89999999998754332111   1234568899999998764 468899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHH---------------HHHHHhh------CChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQR---------------VTEMKLT------MTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~---------------~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      ++|..||..............               .......      .........+++++.++|++||..||++|||
T Consensus       196 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt  275 (285)
T cd07861         196 ATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS  275 (285)
T ss_pred             HHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC
Confidence            999999986432211110000               0000000      0001112457889999999999999999999


Q ss_pred             hHHHHH
Q psy2769         226 YGKLRD  231 (257)
Q Consensus       226 ~~~~~~  231 (257)
                      +.++++
T Consensus       276 ~~~ll~  281 (285)
T cd07861         276 AKKALN  281 (285)
T ss_pred             HHHHhc
Confidence            998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=3.4e-36  Score=243.73  Aligned_cols=210  Identities=17%  Similarity=0.255  Sum_probs=168.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++.+..++..++||||+ +++|..++......+++..+..++.|++.|+.+||+.|+
T Consensus        53 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i  131 (292)
T cd06644          53 LEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKI  131 (292)
T ss_pred             HHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            456888999999998 999999999999999999999999 899988877556678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcchHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDDLEALCYTL  163 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slg~~l  163 (257)
                      +|+||+|+||+++.+   +.++|+|||.+........   ......++..|+|||.+.     ...++.++|+||||+++
T Consensus       132 ~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il  205 (292)
T cd06644         132 IHRDLKAGNVLLTLD---GDIKLADFGVSAKNVKTLQ---RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITL  205 (292)
T ss_pred             eecCCCcceEEEcCC---CCEEEccCccceecccccc---ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHH
Confidence            999999999999765   8899999998765432211   113446788999999884     33467789999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||.....   ......+.....  ........++..+.+++.+||..+|++||+++++++
T Consensus       206 ~el~~g~~p~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         206 IEMAQIEPPHHELNP---MRVLLKIAKSEP--PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHHhcCCCCCccccH---HHHHHHHhcCCC--ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            999999999976432   222222211111  111223567889999999999999999999998865

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3.3e-36  Score=242.28  Aligned_cols=208  Identities=20%  Similarity=0.295  Sum_probs=166.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++......++++||+ +++|..+     ..+++..+..++.|++.||.|||+.|+
T Consensus        43 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i  116 (279)
T cd06619          43 QKQIMSELEILYKCD-SPYIIGFYGAFFVENRISICTEFMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKI  116 (279)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEEEecCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            356889999999997 999999999999999999999999 8887543     247888999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.......     .....++..|+|||.+.+..++.++|+||+|+++|+|++
T Consensus       117 ~H~dlkp~Nill~~~---~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~  188 (279)
T cd06619         117 LHRDVKPSNMLVNTR---GQVKLCDFGVSTQLVNSI-----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELAL  188 (279)
T ss_pred             eeCCCCHHHEEECCC---CCEEEeeCCcceeccccc-----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHh
Confidence            999999999999876   899999999987653321     134578899999999998889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhh-hhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEA-ICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||........................+. .....++.+.+++.+||..+|++||+++++++
T Consensus       189 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         189 GRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             CCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            9999976433221111111111111111111 12357788999999999999999999999876

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0667|consensus

Probab=100.00  E-value=1.5e-36  Score=253.86  Aligned_cols=173  Identities=20%  Similarity=0.226  Sum_probs=148.6

Q ss_pred             CccCCCC-CcccccHHHHHHHHHhcCC-----CCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHH
Q psy2769           1 MKVEPVR-NPVQRLFWERNFYEKLHGA-----PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLA   73 (257)
Q Consensus         1 ~k~~~~~-~~~~~~~~E~~~~~~l~~~-----~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~   73 (257)
                      ||+.+.+ ....+-..|+.+|..|..|     -|+++++++|...+++|+|+|.++.+|+++++.+ -..++...++.++
T Consensus       216 IKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~  295 (586)
T KOG0667|consen  216 IKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFA  295 (586)
T ss_pred             EEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHH
Confidence            3554443 3455677899999999843     4899999999999999999999999999999975 4569999999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .||+.||.+||+.||+|+||||+||++..- +...+|++|||++.......      ..+..+..|.|||++.|.+++.+
T Consensus       296 ~Qil~~L~~L~~l~IIHcDLKPENILL~~~-~r~~vKVIDFGSSc~~~q~v------ytYiQSRfYRAPEVILGlpY~~~  368 (586)
T KOG0667|consen  296 QQILTALLFLHELGIIHCDLKPENILLKDP-KRSRIKVIDFGSSCFESQRV------YTYIQSRFYRAPEVILGLPYDTA  368 (586)
T ss_pred             HHHHHHHHHHHhCCeeeccCChhheeeccC-CcCceeEEecccccccCCcc------eeeeeccccccchhhccCCCCCc
Confidence            999999999999999999999999999764 44689999999997654332      46678889999999999999999


Q ss_pred             chHHHHHHHHHHHHhCCCCCCCCCCcc
Q psy2769         154 DDLEALCYTLVYFLRGKLPWQSIKSDN  180 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~g~~p~~~~~~~~  180 (257)
                      .|+||||||++||++|.+.|.+.+..+
T Consensus       369 IDmWSLGCIlAEL~tG~PLfpG~ne~D  395 (586)
T KOG0667|consen  369 IDMWSLGCILAELFTGEPLFPGDNEYD  395 (586)
T ss_pred             cceeehhhhHHhHhcCccccCCCCHHH
Confidence            999999999999999999998854333

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=2.6e-36  Score=248.64  Aligned_cols=212  Identities=19%  Similarity=0.219  Sum_probs=169.2

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+..|+.++..+. |++|+++++.+.+....++||||+ +++|.+++......+++..+..++.|++.||.+||++|++
T Consensus        46 ~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ii  124 (332)
T cd05623          46 ACFREERDVLVNGD-NQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYV  124 (332)
T ss_pred             HHHHHHHHHHhhCC-CCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence            34778888888887 999999999999999999999999 9999999986567899999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----CCCCCcchHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----LDQSPRDDLEALCYTLV  164 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~Dv~slg~~l~  164 (257)
                      ||||||+||+++.+   +.++|+|||++.........  ......|++.|+|||++.+     ..++.++||||||+++|
T Consensus       125 HrDlkp~Nili~~~---~~~kL~DfG~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~  199 (332)
T cd05623         125 HRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGTV--QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMY  199 (332)
T ss_pred             ecCCCHHHEEECCC---CCEEEeecchheecccCCcc--eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHH
Confidence            99999999999766   88999999998755332211  1133568999999999863     35688999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCC--CCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE--EPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp~~~~~~~  231 (257)
                      +|++|..||...   +..+.+..+.........+.....+++.+.+++++|+..++.+  |++++++++
T Consensus       200 ell~g~~Pf~~~---~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~  265 (332)
T cd05623         200 EMLYGETPFYAE---SLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ  265 (332)
T ss_pred             HHhcCCCCCCCC---CHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence            999999999874   3333444443332222233333568999999999999665544  567777764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=4.5e-36  Score=244.22  Aligned_cols=217  Identities=16%  Similarity=0.214  Sum_probs=174.8

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      .+.+|+.++..+. ||||+++++++... ..+++++++ +++|.+++......++...+..++.|++.||.|||+.|++|
T Consensus        55 ~~~~e~~~~~~l~-h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH  132 (303)
T cd05110          55 EFMDEALIMASMD-HPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVH  132 (303)
T ss_pred             HHHHHHHHHHhCC-CCCcccEEEEEcCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence            6788999999997 99999999988754 477999999 89999998865557899999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-C
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-G  169 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-g  169 (257)
                      +||+|+||+++.+   +.++|+|||++.......... ......++..|++||.+.+..++.++||||||+++|++++ |
T Consensus       133 ~dikp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g  208 (303)
T cd05110         133 RDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEY-NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFG  208 (303)
T ss_pred             cccccceeeecCC---CceEEccccccccccCccccc-ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCC
Confidence            9999999999765   789999999987654332211 1123345678999999998889999999999999999997 8


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      ..||.+.......    .+......   ......++..+.+++..||..+|++||+++++++.|+++.+...
T Consensus       209 ~~p~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~  273 (303)
T cd05110         209 GKPYDGIPTREIP----DLLEKGER---LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ  273 (303)
T ss_pred             CCCCCCCCHHHHH----HHHHCCCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence            9999874322211    11111111   11225578899999999999999999999999999999876554

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9.6e-36  Score=256.87  Aligned_cols=216  Identities=18%  Similarity=0.157  Sum_probs=165.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC----SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+|+.++.++. ||||+++++++...+..++++++++++|.+++...    ........+..++.|++.||.|||+
T Consensus       207 ~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~  285 (501)
T PHA03210        207 AIQLENEILALGRLN-HENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD  285 (501)
T ss_pred             HHHHHHHHHHHHhCC-CCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence            346789999999998 99999999999999999999999988888887642    1234466788899999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      +||+||||||+||+++.+   +.++|+|||++..+......  ......|+..|+|||++.+..++.++|||||||++|+
T Consensus       286 ~gIiHrDLKP~NILl~~~---~~vkL~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  360 (501)
T PHA03210        286 KKLIHRDIKLENIFLNCD---GKIVLGDFGTAMPFEKEREA--FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLD  360 (501)
T ss_pred             CCeecCCCCHHHEEECCC---CCEEEEeCCCceecCccccc--ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHH
Confidence            999999999999999766   88999999999766443211  1134578999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHh----hCC---------------------hhh--hhcCCcHHHHHHHHHHhcC
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKL----TMT---------------------PEA--ICEGTPPEFAEFLRYCRGL  218 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~---------------------~~~--~~~~~~~~~~~li~~~l~~  218 (257)
                      |++|..++...........+..+.....    .++                     .+.  ....++..+.++|.+||..
T Consensus       361 ll~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~  440 (501)
T PHA03210        361 MLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTF  440 (501)
T ss_pred             HHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhcc
Confidence            9998754433222222222222111100    000                     000  0124667788999999999


Q ss_pred             CCCCCCChHHHHH
Q psy2769         219 AFSEEPNYGKLRD  231 (257)
Q Consensus       219 ~p~~Rp~~~~~~~  231 (257)
                      ||.+||++.+++.
T Consensus       441 DP~~Rpsa~elL~  453 (501)
T PHA03210        441 DWHLRPGAAELLA  453 (501)
T ss_pred             CcccCcCHHHHhh
Confidence            9999999999975

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-35  Score=238.75  Aligned_cols=206  Identities=19%  Similarity=0.316  Sum_probs=172.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.+++.+. ||||+++++++..+...++++|++ +++|.+++..  ..+++..+..++.|++.|+.+||+.++
T Consensus        43 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~~i  119 (274)
T cd06609          43 IEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP--GKLDETYIAFILREVLLGLEYLHEEGK  119 (274)
T ss_pred             HHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            456889999999998 999999999999999999999999 9999999884  378999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||.+........   ......++..|+|||.+.+..++.++|+||||+++|+|++
T Consensus       120 ~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~t  193 (274)
T cd06609         120 IHRDIKAANILLSEE---GDVKLADFGVSGQLTSTMS---KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAK  193 (274)
T ss_pred             ccCCCCHHHEEECCC---CCEEEcccccceeeccccc---ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999876   8899999999877654321   1134567889999999998889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcC-CcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEG-TPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||....   .......+...    ..+..... +|+.+.+++.+||..+|++||++++++.
T Consensus       194 g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         194 GEPPLSDLH---PMRVLFLIPKN----NPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             CCCCcccCc---hHHHHHHhhhc----CCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            999997643   22222222222    11222223 7889999999999999999999999965

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.6e-35  Score=244.98  Aligned_cols=220  Identities=21%  Similarity=0.274  Sum_probs=172.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHhc--------------------------
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYCS--------------------------   61 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~~--------------------------   61 (257)
                      ...+.+|+.++.++.+||||+++++++.. +...+++|||+ +++|.+++....                          
T Consensus        54 ~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (343)
T cd05103          54 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISED  133 (343)
T ss_pred             HHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhh
Confidence            44688999999999779999999998765 44678999999 999999987421                          


Q ss_pred             ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEee
Q psy2769          62 ----------------------------------------KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG  101 (257)
Q Consensus        62 ----------------------------------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~  101 (257)
                                                              ..++...+..++.|++.||+|||+.|++|+||||+||+++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~  213 (343)
T cd05103         134 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS  213 (343)
T ss_pred             hhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc
Confidence                                                    2367788899999999999999999999999999999997


Q ss_pred             ccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCcc
Q psy2769         102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDN  180 (257)
Q Consensus       102 ~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~  180 (257)
                      .+   +.++|+|||++........ ........++..|+|||.+.+..++.++|+||||+++|+|++ |..||.......
T Consensus       214 ~~---~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  289 (343)
T cd05103         214 EN---NVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  289 (343)
T ss_pred             CC---CcEEEEecccccccccCcc-hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH
Confidence            65   8899999999876432211 111123345677999999988888999999999999999997 999998743321


Q ss_pred             HHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         181 EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      .  ....+....    ....+...++.+.+++..||+.+|++||++.++++.|+++++.
T Consensus       290 ~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         290 E--FCRRLKEGT----RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             H--HHHHHhccC----CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            1  111111111    1112245678899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.2e-35  Score=238.33  Aligned_cols=213  Identities=19%  Similarity=0.321  Sum_probs=172.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc--------CCCCHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS--------KRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~--------~~~~~~~~~~~~~~i~~~l   80 (257)
                      .+.+.+|++++.++. ||||+++++++......+++|||+ +++|.+++....        ..++...+..++.|++.||
T Consensus        52 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l  130 (275)
T cd05046          52 QSEFRRELDMFRKLS-HKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM  130 (275)
T ss_pred             HHHHHHHHHHHHhcC-CcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHH
Confidence            357899999999997 999999999999888999999999 899999998532        1589999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      +|||+.|++|+||+|+||+++.+   +.++++|||++.......  ........++..|+|||.+.+...+.++||||||
T Consensus       131 ~~LH~~~i~H~dlkp~Nili~~~---~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG  205 (275)
T cd05046         131 DHLSNARFVHRDLAARNCLVSSQ---REVKVSLLSLSKDVYNSE--YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFG  205 (275)
T ss_pred             HHhhhcCcccCcCccceEEEeCC---CcEEEcccccccccCccc--ccccCCceeEEeecChhhhccCCCCchhhHHHHH
Confidence            99999999999999999999876   789999999876432221  1111333556789999999888889999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         161 YTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       161 ~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      ++++++++ |..||......   .....+.......   .....+|..+.+++.+||..+|++||++.++++.|.
T Consensus       206 ~~l~~l~~~~~~p~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         206 VLMWEVFTQGELPFYGLSDE---EVLNRLQAGKLEL---PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHHhCCCCCccccchH---HHHHHHHcCCcCC---CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            99999998 88899764322   2222222111111   122568899999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=7.3e-36  Score=238.42  Aligned_cols=211  Identities=17%  Similarity=0.213  Sum_probs=171.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|+.+++++. |+||+++.+++......++++||+ +++|.+++.. ...+++..+..++.|++.||++||+.|++
T Consensus        47 ~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  124 (265)
T cd06631          47 EKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNCVV  124 (265)
T ss_pred             HHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            46888999999998 999999999999999999999999 9999999974 45688999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC---CCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP---RIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |+||+|+||+++.+   +.++|+|||.+.........   ........++..|+|||.+.+...+.++|+||||++++++
T Consensus       125 H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l  201 (265)
T cd06631         125 HRDIKGNNVMLMPN---GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEM  201 (265)
T ss_pred             cCCcCHHhEEECCC---CeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHH
Confidence            99999999999766   89999999988754321111   1111334688899999999988889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||......   .....+...  ....+.....++..+.+++++||..+|++||++.+++.
T Consensus       202 ~~g~~p~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         202 ATGKPPLASMDRL---AAMFYIGAH--RGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HhCCCccccCChH---HHHHHhhhc--cCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            9999999864322   111111111  11222334678899999999999999999999998864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0594|consensus

Probab=100.00  E-value=7.5e-36  Score=234.13  Aligned_cols=214  Identities=17%  Similarity=0.166  Sum_probs=173.0

Q ss_pred             cccHHHHHHHHHhcCCCC-CcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPG-VPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCS---KRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~-i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l   80 (257)
                      ....+|+.+++.|+ |+| |+.+++++.+..      .+++|+||+..+|..++....   ..++...+..++.|++.||
T Consensus        55 ~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl  133 (323)
T KOG0594|consen   55 STAIREISLLKRLS-HANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGL  133 (323)
T ss_pred             chhhHHHHHHHHhC-CCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHH
Confidence            45689999999999 888 999999998876      789999999999999999765   4688899999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEAL  159 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~sl  159 (257)
                      +|+|++||+||||||.||+++++   |.+||+|||+++.+.-....   ....+.|..|.|||++.+. .++...|+||+
T Consensus       134 ~~~H~~~IlHRDLKPQNlLi~~~---G~lKlaDFGlAra~~ip~~~---yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~  207 (323)
T KOG0594|consen  134 AFLHSHGILHRDLKPQNLLISSS---GVLKLADFGLARAFSIPMRT---YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSL  207 (323)
T ss_pred             HHHHhCCeecccCCcceEEECCC---CcEeeeccchHHHhcCCccc---ccccEEEeeccCHHHhcCCCcCCCCcchHhH
Confidence            99999999999999999999876   99999999999855422211   2456789999999999887 67899999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCCh----------------------hhhhcCCcHHHHHHHHHHhc
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP----------------------EAICEGTPPEFAEFLRYCRG  217 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~li~~~l~  217 (257)
                      ||+++||+++++.|.+....+....+.++...+....+                      ....+..++...+++.+||.
T Consensus       208 GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~  287 (323)
T KOG0594|consen  208 GCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQ  287 (323)
T ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhc
Confidence            99999999999999986553333333332222111111                      11122344589999999999


Q ss_pred             CCCCCCCChHHHHH
Q psy2769         218 LAFSEEPNYGKLRD  231 (257)
Q Consensus       218 ~~p~~Rp~~~~~~~  231 (257)
                      .+|.+|.+++..+.
T Consensus       288 y~p~~R~Sa~~al~  301 (323)
T KOG0594|consen  288 YDPAKRISAKGALT  301 (323)
T ss_pred             cCcccCcCHHHHhc
Confidence            99999999998876

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9.3e-36  Score=247.50  Aligned_cols=212  Identities=17%  Similarity=0.215  Sum_probs=164.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      .....|+.+++++. ||||+++++++......++|+|++.++|.+++......+++..+..++.|++.||.|||++||+|
T Consensus       102 ~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH  180 (357)
T PHA03209        102 GTTLIEAMLLQNVN-HPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIH  180 (357)
T ss_pred             cccHHHHHHHHhCC-CCCCcChhheEEeCCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            34578999999998 99999999999999999999999988999998866778999999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGK  170 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~  170 (257)
                      |||||+||+++.+   +.++|+|||.+......    .......|+..|+|||++.+..++.++|||||||++|+|+++.
T Consensus       181 rDlkp~Nill~~~---~~~kl~DfG~a~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~  253 (357)
T PHA03209        181 RDVKTENIFINDV---DQVCIGDLGAAQFPVVA----PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYP  253 (357)
T ss_pred             CCCCHHHEEECCC---CCEEEecCccccccccC----cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcC
Confidence            9999999999766   88999999998643221    1113456899999999999988999999999999999999854


Q ss_pred             CC-CCCCCCccH------HHHHHHHHHHHhhCChhh------------------------------hhcCCcHHHHHHHH
Q psy2769         171 LP-WQSIKSDNE------ETRMQRVTEMKLTMTPEA------------------------------ICEGTPPEFAEFLR  213 (257)
Q Consensus       171 ~p-~~~~~~~~~------~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~li~  213 (257)
                      .| |........      ...+..+..... ..+..                              ....++..+.++|.
T Consensus       254 ~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  332 (357)
T PHA03209        254 STIFEDPPSTPEEYVKSCHSHLLKIISTLK-VHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVH  332 (357)
T ss_pred             CccccCCCCcHHHHHHHHHHHHHHHHHHhc-cChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHH
Confidence            44 443222110      111111111000 00000                              01245677888999


Q ss_pred             HHhcCCCCCCCChHHHHH
Q psy2769         214 YCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       214 ~~l~~~p~~Rp~~~~~~~  231 (257)
                      +||+.||++|||+.++++
T Consensus       333 ~mL~~dP~~Rpta~e~l~  350 (357)
T PHA03209        333 KMLTFDAAMRPSAEEILN  350 (357)
T ss_pred             HHHcCCcccCcCHHHHhc
Confidence            999999999999999875

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=6.8e-36  Score=237.38  Aligned_cols=212  Identities=21%  Similarity=0.345  Sum_probs=173.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+..|+.++..+. ||+|+++++++...+..+++||++ +++|.+++...... +++..+..++.|++.||++||+.
T Consensus        44 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~  122 (258)
T smart00219       44 QIEEFLREARIMRKLD-HPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK  122 (258)
T ss_pred             HHHHHHHHHHHHHhcC-CCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC
Confidence            4568899999999995 999999999999989999999999 99999999854333 99999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+...........  ....++..|+|||.+.+..++.++|+||+|+++++|
T Consensus       123 ~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l  197 (258)
T smart00219      123 NFIHRDLAARNCLVGEN---LVVKISDFGLSRDLYDDDYYKK--KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEI  197 (258)
T ss_pred             CeeecccccceEEEccC---CeEEEcccCCceeccccccccc--ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHH
Confidence            99999999999999866   7999999999876654321111  123367899999999888889999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      ++ |..||....   .......+....    .......+|..+.+++.+|+..+|++|||+.++++.|
T Consensus       198 ~~~g~~p~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      198 FTLGESPYPGMS---NEEVLEYLKKGY----RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HhCCCCCCCCCC---HHHHHHHHhcCC----CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            98 888888632   222223332222    1222355889999999999999999999999998754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.5e-35  Score=239.21  Aligned_cols=204  Identities=21%  Similarity=0.238  Sum_probs=166.4

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+.+|+.++..+. |++++.+.+.+..++..|++|||+ +++|.+.+... ...+++..+..++.|++.||.|||+.|+
T Consensus        45 ~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  123 (285)
T cd05632          45 SMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT  123 (285)
T ss_pred             HHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            45778999999997 999999999999999999999999 89998888643 3469999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.......    ......++..|+|||.+.+..++.++|+||+|+++|+|++
T Consensus       124 iH~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~----~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~  196 (285)
T cd05632         124 VYRDLKPENILLDDY---GHIRISDLGLAVKIPEGE----SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIE  196 (285)
T ss_pred             eecCCCHHHEEECCC---CCEEEecCCcceecCCCC----cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHh
Confidence            999999999999765   789999999886543221    1134568999999999998889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      |..||...........   +.... ..........+++.+.+++..||+.||++||++
T Consensus       197 g~~P~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05632         197 GQSPFRGRKEKVKREE---VDRRV-LETEEVYSAKFSEEAKSICKMLLTKDPKQRLGC  250 (285)
T ss_pred             CCCCCCCCCHHHHHHH---HHHhh-hccccccCccCCHHHHHHHHHHccCCHhHcCCC
Confidence            9999987533222111   11111 111122335688899999999999999999993

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-36  Score=239.87  Aligned_cols=211  Identities=22%  Similarity=0.299  Sum_probs=167.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISR   79 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~   79 (257)
                      .+.+.+|+.++.++.+||||+++++++....      ..+++|||+ +++|.+++...   +..+++..+..++.|++.|
T Consensus        46 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~a  125 (275)
T cd06608          46 EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRG  125 (275)
T ss_pred             HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence            4578899999999977999999999987544      489999999 89999998753   3679999999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-----CCCCcc
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-----DQSPRD  154 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~  154 (257)
                      |.+||+.|++|+||+|+||+++.+   +.++|+|||.+.........   .....++..|+|||.+...     .++.++
T Consensus       126 l~~lH~~~i~H~~l~p~ni~~~~~---~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  199 (275)
T cd06608         126 LAYLHENKVIHRDIKGQNILLTKN---AEVKLVDFGVSAQLDSTLGR---RNTFIGTPYWMAPEVIACDEQPDASYDARS  199 (275)
T ss_pred             HHHHhcCCcccCCCCHHHEEEccC---CeEEECCCccceecccchhh---hcCccccccccCHhHhcccccccCCccccc
Confidence            999999999999999999999866   88999999998765433211   1345688899999998543     357789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||||+|++++++++|..||.....   ......+......  .......+++.+.+++.+||..||++|||++++++
T Consensus       200 Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         200 DVWSLGITAIELADGKPPLCDMHP---MRALFKIPRNPPP--TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             cHHHhHHHHHHHHhCCCCccccch---HHHHHHhhccCCC--CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            999999999999999999976422   2222222221111  11111347789999999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.5e-35  Score=237.04  Aligned_cols=212  Identities=24%  Similarity=0.290  Sum_probs=169.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRF--SLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+.+|+.+++.++ ||||+++++++..++..++++||+ +++|.+.+......+  +...+..++.|++.||++||+
T Consensus        48 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  126 (268)
T cd06624          48 YVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD  126 (268)
T ss_pred             HHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            3457889999999998 999999999999999999999999 999999998543445  788899999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC--CCCcchHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD--QSPRDDLEALCYTL  163 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Dv~slg~~l  163 (257)
                      .|++|+||+|+||+++.+  .+.++|+|||.+........   ......++..|+|||.+.+..  ++.++|+||+|+++
T Consensus       127 ~~i~h~dl~p~nil~~~~--~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl  201 (268)
T cd06624         127 NQIVHRDIKGDNVLVNTY--SGVVKISDFGTSKRLAGINP---CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTI  201 (268)
T ss_pred             CCEeecCCCHHHEEEcCC--CCeEEEecchhheecccCCC---ccccCCCCccccChhhhccccccCCchhhhHHHHHHH
Confidence            999999999999999742  26899999999875533221   113345788999999986643  67899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||..........  ...   ......+..+..+++.+.+++.+||+.+|++||++.++++
T Consensus       202 ~~l~~g~~p~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         202 VEMATGKPPFIELGEPQAAM--FKV---GMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHHHhCCCCCccccChhhhH--hhh---hhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            99999999998643322111  111   1111222334568889999999999999999999999865

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG1187|consensus

Probab=100.00  E-value=1.8e-36  Score=249.15  Aligned_cols=222  Identities=21%  Similarity=0.259  Sum_probs=171.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-ccEEEEecc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-YNILVMELL-GPSLEDLFQYCSK-RFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-~~~~v~e~~-~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+|.+|+.++.+++ |||+++++|||...+ ..++|+||+ .|||.+.+..... .+++....+|+.+++.||+|||..
T Consensus       115 ~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~  193 (361)
T KOG1187|consen  115 EREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEG  193 (361)
T ss_pred             hhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccC
Confidence            355999999999999 999999999999888 599999999 8999999986544 889999999999999999999975


Q ss_pred             C---ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCC-CCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          87 K---IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGL-TGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        87 ~---i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~-~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      .   |+|||||+.||+++.+   .+.|++|||++......   ....... .||..|++||+...+..+.++||||||++
T Consensus       194 ~~~~iiHrDiKssNILLD~~---~~aKlsDFGLa~~~~~~---~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVv  267 (361)
T KOG1187|consen  194 CPPPIIHRDIKSSNILLDED---FNAKLSDFGLAKLGPEG---DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVV  267 (361)
T ss_pred             CCCCEecCCCCHHHeeECCC---CCEEccCccCcccCCcc---ccceeeecCCCCccCChhhhccCCcCcccccccchHH
Confidence            4   9999999999999877   89999999999544320   1111222 79999999999999889999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccH---HH-HHHHHHHH-HhhCChhhhh-cCCc-----HHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNE---ET-RMQRVTEM-KLTMTPEAIC-EGTP-----PEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~---~~-~~~~~~~~-~~~~~~~~~~-~~~~-----~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.|+++|+.+.+.......   .. ....+... .....++.+. ...+     ..+..+...|++.+|..||++.++.+
T Consensus       268 llElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  268 LLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            9999999988875431111   11 01111111 1111222222 2233     22667788999999999999999988


Q ss_pred             HHHHHHH
Q psy2769         232 SFRNLLE  238 (257)
Q Consensus       232 ~l~~~~~  238 (257)
                      .|+....
T Consensus       348 ~L~~~~~  354 (361)
T KOG1187|consen  348 ELEGILS  354 (361)
T ss_pred             HHHhhcc
Confidence            8855443

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.5e-35  Score=239.76  Aligned_cols=196  Identities=23%  Similarity=0.278  Sum_probs=167.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++..+...+++|||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        45 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qil~~l~~lH~~~i  122 (290)
T cd05580          45 VEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK-SGRFPEPVARFYAAQVVLALEYLHSLDI  122 (290)
T ss_pred             HHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            456888999999998 999999999999999999999999 9999999985 4679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++......      .....+++.|+|||.+.+...+.++|+||||+++|+|++
T Consensus       123 ~H~dl~p~nili~~~---~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  193 (290)
T cd05580         123 VYRDLKPENLLLDSD---GYIKITDFGFAKRVKGR------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA  193 (290)
T ss_pred             ecCCCCHHHEEECCC---CCEEEeeCCCccccCCC------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHh
Confidence            999999999999766   88999999998765433      144568889999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |..||....   .......+.....     ..+..++..+.+++.+||..+|.+|+
T Consensus       194 g~~p~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~R~  241 (290)
T cd05580         194 GYPPFFDDN---PIQIYEKILEGKV-----RFPSFFSPDAKDLIRNLLQVDLTKRL  241 (290)
T ss_pred             CCCCCCCCC---HHHHHHHHhcCCc-----cCCccCCHHHHHHHHHHccCCHHHcc
Confidence            999998643   2222233332222     23356789999999999999999999

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=9e-36  Score=246.52  Aligned_cols=207  Identities=20%  Similarity=0.288  Sum_probs=164.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.+++.+. ||||+++++++...      ...|+++++++++|.+++.  ...+++..+..++.|++.||.||
T Consensus        58 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~L  134 (343)
T cd07878          58 ARRTYRELRLLKHMK-HENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYI  134 (343)
T ss_pred             HHHHHHHHHHHHhcC-CCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            345778999999998 99999999987543      3468999999999998887  46799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      |+.|++|+||||+||+++.+   +.++|+|||++......      .....+++.|+|||.+.+ ..++.++||||+|++
T Consensus       135 H~~~ivHrdikp~Nil~~~~---~~~kl~Dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  205 (343)
T cd07878         135 HSAGIIHRDLKPSNVAVNED---CELRILDFGLARQADDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  205 (343)
T ss_pred             HHCCeecccCChhhEEECCC---CCEEEcCCccceecCCC------cCCccccccccCchHhcCCccCCchhhhHhHHHH
Confidence            99999999999999999866   88999999998764332      134578999999999877 467889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh--------------------------CChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT--------------------------MTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|+|++|..||........   +..+......                          ..........++.+.+++.+||
T Consensus       206 l~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL  282 (343)
T cd07878         206 MAELLKGKALFPGNDYIDQ---LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKML  282 (343)
T ss_pred             HHHHHHCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHc
Confidence            9999999999976432221   1111110000                          0001122356777899999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++|||+.++++
T Consensus       283 ~~dp~~R~s~~ell~  297 (343)
T cd07878         283 VLDSDKRISASEALA  297 (343)
T ss_pred             CCChhhCCCHHHHhc
Confidence            999999999999985

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=2.1e-35  Score=236.61  Aligned_cols=210  Identities=21%  Similarity=0.303  Sum_probs=166.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ...+..|+.++.++.+||||+++++++...      ...+++|||+ +++|.+++... ...+++..+..++.|++.|++
T Consensus        46 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~  125 (272)
T cd06637          46 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS  125 (272)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            456889999999997799999999998753      4588999999 89999998853 356899999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----CCCCCcchH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----LDQSPRDDL  156 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~Dv  156 (257)
                      |||+.+++|+||+|+||+++.+   +.++|+|||++........   ......++..|+|||++.+     ..++.++|+
T Consensus       126 ~LH~~~ivh~dl~~~nili~~~---~~~~l~Dfg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv  199 (272)
T cd06637         126 HLHQHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL  199 (272)
T ss_pred             HHHHCCCccCCCCHHHEEECCC---CCEEEccCCCceecccccc---cCCcccccccccCHhHhccccCcCCCCCchhhH
Confidence            9999999999999999999866   7899999999875433211   1134568889999999863     356789999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||+|+++|+|++|..||.......   .......   ..........++..+.+++.+||..+|.+||++.++++
T Consensus       200 ~slGv~l~el~~g~~p~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         200 WSLGITAIEMAEGAPPLCDMHPMR---ALFLIPR---NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHHHHHHHHHhCCCCccccCHHH---HHHHHhc---CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            999999999999999997643221   1111111   11111122457889999999999999999999998864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.8e-35  Score=263.10  Aligned_cols=221  Identities=22%  Similarity=0.337  Sum_probs=175.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh----------cCCCCHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC----------SKRFSLKTVLMLADQMIS   78 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~----------~~~~~~~~~~~~~~~i~~   78 (257)
                      .+++.+|+.++.++. ||||+++++++..++..+++|||+ |++|.+++...          ....+...+..++.|++.
T Consensus        46 ~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~  124 (932)
T PRK13184         46 KKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICA  124 (932)
T ss_pred             HHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHH
Confidence            457889999999998 999999999999999999999999 99999998742          123556778899999999


Q ss_pred             HHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCC---------------CCCCCccCCCCcccccChh
Q psy2769          79 RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNC---------------PPRIRTRGLTGTARYASVN  143 (257)
Q Consensus        79 ~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~~~~aPE  143 (257)
                      ||++||+.|++||||||+||+++.+   +.++|+|||++.......               ..........||+.|+|||
T Consensus       125 AL~yLHs~GIIHRDLKPeNILLd~d---g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE  201 (932)
T PRK13184        125 TIEYVHSKGVLHRDLKPDNILLGLF---GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPE  201 (932)
T ss_pred             HHHHHHHCCccccCCchheEEEcCC---CCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHH
Confidence            9999999999999999999999766   889999999987652111               0001112356899999999


Q ss_pred             HhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhh--hcCCcHHHHHHHHHHhcCCCC
Q psy2769         144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAI--CEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       144 ~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~  221 (257)
                      .+.+..++.++||||+||++|+|++|..||........   ...    .....+...  ...+|+.+.+++.+|++.||+
T Consensus       202 ~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki---~~~----~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~  274 (932)
T PRK13184        202 RLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI---SYR----DVILSPIEVAPYREIPPFLSQIAMKALAVDPA  274 (932)
T ss_pred             HhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh---hhh----hhccChhhccccccCCHHHHHHHHHHccCChh
Confidence            99999999999999999999999999999986322111   110    000111111  146889999999999999999


Q ss_pred             CCC-ChHHHHHHHHHHHHhcc
Q psy2769         222 EEP-NYGKLRDSFRNLLENKE  241 (257)
Q Consensus       222 ~Rp-~~~~~~~~l~~~~~~~~  241 (257)
                      +|| +++++.+.|++++....
T Consensus       275 kR~ss~eeLl~~Le~~lq~~p  295 (932)
T PRK13184        275 ERYSSVQELKQDLEPHLQGSP  295 (932)
T ss_pred             hCcCHHHHHHHHHHHHHhcCc
Confidence            997 67888999998887543

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=4.7e-36  Score=249.29  Aligned_cols=211  Identities=17%  Similarity=0.186  Sum_probs=162.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.+++.+. ||||+++++++...      ...+++|||+++++.+.+.   ..++...+..++.|++.||.||
T Consensus        60 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~l~~~~~~~~~~qi~~aL~~L  135 (355)
T cd07874          60 AKRAYRELVLMKCVN-HKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL  135 (355)
T ss_pred             HHHHHHHHHHHHHhC-CCchhceeeeeeccccccccceeEEEhhhhcccHHHHHh---hcCCHHHHHHHHHHHHHHHHHH
Confidence            456778999999998 99999999987643      3479999999778877776   3588999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.|++||||||+||+++.+   +.++|+|||++.......    ......++..|+|||.+.+..++.++||||||+++
T Consensus       136 H~~givHrDikp~Nill~~~---~~~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il  208 (355)
T cd07874         136 HSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM  208 (355)
T ss_pred             HhCCcccCCCChHHEEECCC---CCEEEeeCcccccCCCcc----ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHH
Confidence            99999999999999999766   889999999987543321    11345789999999999998899999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHH-------------------HHHhhC---------------ChhhhhcCCcHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVT-------------------EMKLTM---------------TPEAICEGTPPEFA  209 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~-------------------~~~~~~---------------~~~~~~~~~~~~~~  209 (257)
                      |+|++|..||.+..............                   ......               .........+..+.
T Consensus       209 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (355)
T cd07874         209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR  288 (355)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHH
Confidence            99999999998743221111100000                   000000               00001122356789


Q ss_pred             HHHHHHhcCCCCCCCChHHHHH
Q psy2769         210 EFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       210 ~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|.+||..||++|||++++++
T Consensus       289 ~li~~mL~~dP~~Rps~~ell~  310 (355)
T cd07874         289 DLLSKMLVIDPAKRISVDEALQ  310 (355)
T ss_pred             HHHHHHhcCCchhcCCHHHHhc
Confidence            9999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=6.8e-36  Score=238.89  Aligned_cols=215  Identities=20%  Similarity=0.289  Sum_probs=174.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++++++ ||||+++++++...+..++|+||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        47 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i  124 (268)
T cd06630          47 VEALRKEIRLMARLN-HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQI  124 (268)
T ss_pred             HHHHHHHHHHHHHcC-CCceehhhceeccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            457889999999998 999999999999999999999999 9999999874 4578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC-CccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI-RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||+|+||+++.+  ...++|+|||.+........... ......++..|+|||.+.+..++.++|+||+|+++++++
T Consensus       125 ~H~~i~~~nil~~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~  202 (268)
T cd06630         125 IHRDVKGANLLIDST--GQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMA  202 (268)
T ss_pred             ecCCCCHHHEEEcCC--CCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHH
Confidence            999999999999754  24699999999876654321111 112346788999999998888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||...........+..+   ......+.....+++.+.+++.+||..+|++||++.++++
T Consensus       203 ~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         203 TAKPPWNAEKHSNHLALIFKI---ASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             hCCCCCCCCCCcchHHHHHHH---hccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            999999765433333322222   1122233344567889999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=2.7e-36  Score=244.29  Aligned_cols=208  Identities=21%  Similarity=0.305  Sum_probs=169.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++.+...+..+++|||+ +++|.+++.  ...+++..+..++.|++.||.+||+.|+
T Consensus        63 ~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~i  139 (292)
T cd06658          63 RELLFNEVVIMRDYH-HENVVDMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQGV  139 (292)
T ss_pred             HHHHHHHHHHHHhCC-CCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            456889999999997 999999999999999999999999 899998886  4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.........   .....++..|+|||...+..++.++|+||+|+++|++++
T Consensus       140 vH~dlkp~Nill~~~---~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~  213 (292)
T cd06658         140 IHRDIKSDSILLTSD---GRIKLSDFGFCAQVSKEVPK---RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID  213 (292)
T ss_pred             eecCCCHHHEEEcCC---CCEEEccCcchhhccccccc---CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999766   88999999988654332211   133568889999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.....   ...+..+... .. ........++..+.+++.+||..+|.+||+++++++
T Consensus       214 g~~p~~~~~~---~~~~~~~~~~-~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         214 GEPPYFNEPP---LQAMRRIRDN-LP-PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             CCCCCCCCCH---HHHHHHHHhc-CC-CccccccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            9999986432   2222222211 11 111112357888999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG1094|consensus

Probab=100.00  E-value=9e-37  Score=251.65  Aligned_cols=225  Identities=14%  Similarity=0.190  Sum_probs=189.9

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+.+..|.+|+++|.+|+ ||||++++|.|..++.+|+|+||+ .|+|.+++.... .........+++.||++|++||.
T Consensus       576 ~~~r~~F~kEIkiLsqLk-hPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe  654 (807)
T KOG1094|consen  576 KNARNDFLKEIKILSRLK-HPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE  654 (807)
T ss_pred             hhHHHHHHHHHHHHhccC-CCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH
Confidence            345678999999999997 999999999999999999999999 999999999652 22455677889999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.++||||+.++|+|++.+   .++||+|||+++.+-....-... ...+-+.+|+|+|.+..++.+.++|+|+||+++|
T Consensus       655 s~nfVHrd~a~rNcLv~~e---~~iKiadfgmsR~lysg~yy~vq-gr~vlpiRwmawEsillgkFttaSDvWafgvTlw  730 (807)
T KOG1094|consen  655 SLNFVHRDLATRNCLVDGE---FTIKIADFGMSRNLYSGDYYRVQ-GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLW  730 (807)
T ss_pred             hhchhhccccccceeecCc---ccEEecCcccccccccCCceeee-cceeeeeeehhHHHHHhccccchhhhhhhHHHHH
Confidence            9999999999999999876   89999999999876655433332 5667789999999999999999999999999999


Q ss_pred             HHHh--CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         165 YFLR--GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       165 ~l~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |+++  .+.||..+.+....+....+......-.....+.-||..+.+++-.||..|..+||+++++...|.+.
T Consensus       731 E~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  731 EVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             HHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            9876  79999998777665555444433333333445578999999999999999999999999999888764

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=6.2e-36  Score=240.38  Aligned_cols=206  Identities=19%  Similarity=0.287  Sum_probs=170.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++..+...++|+||+ +++|.+.+.  ...+++..+..++.|++.|+.|||+.|+
T Consensus        46 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i  122 (277)
T cd06642          46 IEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSERK  122 (277)
T ss_pred             HHHHHHHHHHHHcCC-CCccHhhhcccccCCceEEEEEccCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            457889999999997 999999999999999999999999 899999887  4678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||++........   ......++..|+|||.+.+..++.++|+||||+++++|++
T Consensus       123 vH~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t  196 (277)
T cd06642         123 IHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAK  196 (277)
T ss_pred             eccCCChheEEEeCC---CCEEEccccccccccCcch---hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHh
Confidence            999999999999766   8899999999865543211   1123457889999999998888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||........   ...+..    ...+.....++..+.+++.+||+.+|++||++.+++.
T Consensus       197 g~~p~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         197 GEPPNSDLHPMRV---LFLIPK----NSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             CCCCCcccchhhH---Hhhhhc----CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            9999976432221   111111    1122233567888999999999999999999999987

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.6e-35  Score=237.64  Aligned_cols=213  Identities=17%  Similarity=0.223  Sum_probs=166.6

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|+.++.++. |||++++++++..+...++++||+ +++|..+.. ....+++..+..++.|++.||.+||+.|++
T Consensus        45 ~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~  122 (286)
T cd07847          45 KIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEK-NPRGVPEHLIKKIIWQTLQAVNFCHKHNCI  122 (286)
T ss_pred             HHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            45788999999998 999999999999999999999999 666555544 455799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||.+.........   .....++..|+|||.+.+. .++.++|+||+|+++|+|++
T Consensus       123 H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~  196 (286)
T cd07847         123 HRDVKPENILITKQ---GQIKLCDFGFARILTGPGDD---YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLT  196 (286)
T ss_pred             ecCCChhhEEEcCC---CcEEECccccceecCCCccc---ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHh
Confidence            99999999999766   88999999998766443211   1334577899999998763 46889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHH-----H-----------hh-------CChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEM-----K-----------LT-------MTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~-----~-----------~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      |..||.+....+....+......     .           ..       .......+.++..+.+++.+||..+|++||+
T Consensus       197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  276 (286)
T cd07847         197 GQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS  276 (286)
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC
Confidence            99999875433222111110000     0           00       0011223467889999999999999999999


Q ss_pred             hHHHHH
Q psy2769         226 YGKLRD  231 (257)
Q Consensus       226 ~~~~~~  231 (257)
                      +.+++.
T Consensus       277 ~~eil~  282 (286)
T cd07847         277 CEELLE  282 (286)
T ss_pred             HHHHhc
Confidence            998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=7.6e-36  Score=237.43  Aligned_cols=209  Identities=26%  Similarity=0.412  Sum_probs=169.8

Q ss_pred             HHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy2769          14 FWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD   92 (257)
Q Consensus        14 ~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~d   92 (257)
                      .+|+.++..+. ||||+++++++......+++||++ +++|.+++. ....++...+..++.|++.||.+||+.|++|+|
T Consensus        46 ~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~d  123 (260)
T PF00069_consen   46 IREIKILRRLR-HPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRD  123 (260)
T ss_dssp             HHHHHHHHHHT-BTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred             hhhhhcccccc-cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc
Confidence            45999999996 999999999999999999999999 779999998 467789999999999999999999999999999


Q ss_pred             CCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-CCCCCCcchHHHHHHHHHHHHhCCC
Q psy2769          93 IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDDLEALCYTLVYFLRGKL  171 (257)
Q Consensus        93 l~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~Dv~slg~~l~~l~~g~~  171 (257)
                      |+|+||+++.+   +.++|+|||.+......   ........++..|.|||.+. +...+.++|+||+|+++++|++|..
T Consensus       124 ikp~NIl~~~~---~~~~l~Dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~  197 (260)
T PF00069_consen  124 IKPENILLDEN---GEVKLIDFGSSVKLSEN---NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKL  197 (260)
T ss_dssp             BSGGGEEESTT---SEEEESSGTTTEESTST---TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSS
T ss_pred             ccccccccccc---ccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999866   89999999998764211   12225567899999999998 7788999999999999999999999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         172 PWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       172 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||......+....+............. .....++.+.+++.+||+.||++||+++++++
T Consensus       198 p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  198 PFEESNSDDQLEIIEKILKRPLPSSSQ-QSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             SSTTSSHHHHHHHHHHHHHTHHHHHTT-SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             ccccccchhhhhhhhhccccccccccc-ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999863333333333332222111100 01123478999999999999999999998864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=4.8e-36  Score=246.86  Aligned_cols=211  Identities=18%  Similarity=0.216  Sum_probs=166.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|..++..+. |++|+++++++...+..|+||||+ +++|.+++......+++..+..++.|++.||.++|++|++
T Consensus        46 ~~~~~e~~~l~~~~-~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~ii  124 (331)
T cd05624          46 ACFREERNVLVNGD-CQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYV  124 (331)
T ss_pred             HHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            44778888888887 999999999999999999999999 9999999986567899999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----CCCCCcchHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----LDQSPRDDLEALCYTLV  164 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~Dv~slg~~l~  164 (257)
                      |+||||+||+++.+   +.++|+|||++.........  ......|++.|+|||++.+     ..++.++|+||+|+++|
T Consensus       125 HrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~  199 (331)
T cd05624         125 HRDIKPDNVLLDMN---GHIRLADFGSCLKMNQDGTV--QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMY  199 (331)
T ss_pred             eccCchHHEEEcCC---CCEEEEeccceeeccCCCce--eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhh
Confidence            99999999999766   88999999998765433211  1123568999999999876     35678999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCC--CCChHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE--EPNYGKLR  230 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp~~~~~~  230 (257)
                      +|++|..||....   ..+.+..+.........+.....+++.+.+++.+|+..++++  |+++++++
T Consensus       200 ell~g~~Pf~~~~---~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~  264 (331)
T cd05624         200 EMLYGETPFYAES---LVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFK  264 (331)
T ss_pred             hhhhCCCCccCCC---HHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHh
Confidence            9999999998643   233333333322222223333567899999999999865544  34566554

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1e-35  Score=239.66  Aligned_cols=211  Identities=21%  Similarity=0.289  Sum_probs=167.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee------CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS------GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~------~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ....+..|+.+++++.+||||+++++++..      ....+++|||+ +++|.+++... ...+++..+..++.|++.|+
T Consensus        55 ~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al  134 (282)
T cd06636          55 EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGL  134 (282)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHH
Confidence            345688899999999779999999998853      45789999999 88999999853 34588889999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcch
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDD  155 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~D  155 (257)
                      .|||+.|++|+|++|+||+++.+   +.++|+|||.+........   ......++..|+|||.+.     ...++.++|
T Consensus       135 ~~LH~~~ivH~dl~~~nili~~~---~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~D  208 (282)
T cd06636         135 AHLHAHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDYRSD  208 (282)
T ss_pred             HHHHHCCcccCCCCHHHEEECCC---CCEEEeeCcchhhhhcccc---CCCcccccccccCHhhcCcccCcCcCCCcccc
Confidence            99999999999999999999766   7899999998765432211   113456888999999985     335678999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         156 LEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       156 v~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +||||+++|+|++|..||......   ..+..+.   ...........+|..+.++|++||..||.+||++.++++
T Consensus       209 vwslG~~l~el~~g~~p~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         209 IWSLGITAIEMAEGAPPLCDMHPM---RALFLIP---RNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             hhHHHHHHHHHHhCCCCccccCHH---hhhhhHh---hCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            999999999999999999764321   2111111   111222222468899999999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-35  Score=242.93  Aligned_cols=213  Identities=22%  Similarity=0.292  Sum_probs=170.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.++..+. ||+|+++++.+..+...|++|||+ +++|.+++... ...+++..+..++.|++.||+|||+.
T Consensus        44 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~  122 (316)
T cd05574          44 KVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL  122 (316)
T ss_pred             HHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456888999999998 999999999999999999999999 99999998853 35789999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC--------------------------CCCccCCCCccccc
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP--------------------------RIRTRGLTGTARYA  140 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~  140 (257)
                      |++|+||||+||+++.+   +.++|+|||++.........                          ........|+..|+
T Consensus       123 ~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~  199 (316)
T cd05574         123 GIVYRDLKPENILLHES---GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYI  199 (316)
T ss_pred             CeeccCCChHHeEEcCC---CCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCc
Confidence            99999999999999866   88999999987654332110                          00112346788999


Q ss_pred             ChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         141 SVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       141 aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      |||.+.+..++.++||||||+++|+|++|..||.....   ...+..+.........   ....++.+.+++.+||..+|
T Consensus       200 aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p  273 (316)
T cd05574         200 APEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR---DETFSNILKKEVTFPG---SPPVSSSARDLIRKLLVKDP  273 (316)
T ss_pred             CHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch---HHHHHHHhcCCccCCC---ccccCHHHHHHHHHHccCCH
Confidence            99999988889999999999999999999999986432   2223333222221111   12378999999999999999


Q ss_pred             CCCCC----hHHHHH
Q psy2769         221 SEEPN----YGKLRD  231 (257)
Q Consensus       221 ~~Rp~----~~~~~~  231 (257)
                      ++||+    +++++.
T Consensus       274 ~~R~s~~~~~~~ll~  288 (316)
T cd05574         274 SKRLGSKRGAAEIKQ  288 (316)
T ss_pred             hHCCCchhhHHHHHc
Confidence            99999    655554

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=6.5e-36  Score=249.25  Aligned_cols=208  Identities=17%  Similarity=0.198  Sum_probs=163.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.+++.+. ||||+++++++...      ...|+||||++++|.+.+.   ..++...+..++.|++.||.||
T Consensus        67 ~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~L  142 (364)
T cd07875          67 AKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL  142 (364)
T ss_pred             HHHHHHHHHHHHhcC-CCCccccceeecccccccccCeEEEEEeCCCCCHHHHHH---hcCCHHHHHHHHHHHHHHHHHH
Confidence            456788999999998 99999999987543      3579999999888888776   3588899999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.|++||||||+||+++.+   +.++|+|||++.......    ......++..|+|||++.+..++.++||||||+++
T Consensus       143 H~~~ivH~Dlkp~NIll~~~---~~~kL~DfG~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il  215 (364)
T cd07875         143 HSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM  215 (364)
T ss_pred             hhCCeecCCCCHHHEEECCC---CcEEEEeCCCccccCCCC----cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHH
Confidence            99999999999999999766   899999999987543321    11345789999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhh-------------------CC------h------------hhhhcCCcH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLT-------------------MT------P------------EAICEGTPP  206 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------~~------~------------~~~~~~~~~  206 (257)
                      |+|++|..||.+......   ...+......                   .+      .            .......+.
T Consensus       216 ~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (364)
T cd07875         216 GEMIKGGVLFPGTDHIDQ---WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKAS  292 (364)
T ss_pred             HHHHhCCCCCCCCCHHHH---HHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccH
Confidence            999999999987533222   1111110000                   00      0            000011345


Q ss_pred             HHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         207 EFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       207 ~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .+.++|.+||..||.+|||++++++
T Consensus       293 ~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         293 QARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             HHHHHHHHhcCcCcccCCCHHHHhc
Confidence            7899999999999999999999876

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=3.7e-35  Score=233.23  Aligned_cols=208  Identities=20%  Similarity=0.214  Sum_probs=169.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.++.++. ||+++++.+.+.. +...++++|++ +++|.+.+... ...+++.++..++.+++.|+.+||+.
T Consensus        43 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~  121 (257)
T cd08223          43 RKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK  121 (257)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            446788999999998 9999999998764 44678999999 89999998854 45689999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+........   ......+++.|+|||.+.+..++.++|+||+|+++++|
T Consensus       122 ~i~H~di~p~nil~~~~---~~~~l~df~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l  195 (257)
T cd08223         122 HILHRDLKTQNVFLTRT---NIIKVGDLGIARVLENQCD---MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEM  195 (257)
T ss_pred             CeeccCCCchhEEEecC---CcEEEecccceEEecccCC---ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHH
Confidence            99999999999999765   8899999999876543221   11345688899999999998889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   .......+..+..    +.....+++.+.+++.+|++.+|++||++.++++
T Consensus       196 ~~g~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         196 ATLKHAFNAKD---MNSLVYRIIEGKL----PPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HcCCCCCCCCC---HHHHHHHHHhcCC----CCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            99999998632   2222222222221    1223568899999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG4645|consensus

Probab=100.00  E-value=9.6e-38  Score=276.60  Aligned_cols=213  Identities=24%  Similarity=0.296  Sum_probs=181.2

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .....+.+|..++..++ |||+++++|+-.+.+..++.|||| +|+|.++++. ++..++.....+..|++.|++|||++
T Consensus      1276 k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~-gri~dE~vt~vyt~qll~gla~LH~~ 1353 (1509)
T KOG4645|consen 1276 KTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEH-GRIEDEMVTRVYTKQLLEGLAYLHEH 1353 (1509)
T ss_pred             ccCcchHHHHHHHHhcc-CccccccCceeecHHHHHHHHHHhccCcHHHHHHh-cchhhhhHHHHHHHHHHHHHHHHHhc
Confidence            34556889999999999 999999999999999999999999 9999999994 55677778888999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-CCCccCCCCcccccChhHhcCCC---CCCcchHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLTGTARYASVNAHQWLD---QSPRDDLEALCYT  162 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~---~~~~~Dv~slg~~  162 (257)
                      |||||||||.||+++.+   |.+|++|||.+..+.++... ........||+.|||||++.+..   -..++|||||||+
T Consensus      1354 gIVHRDIK~aNI~Ld~~---g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCV 1430 (1509)
T KOG4645|consen 1354 GIVHRDIKPANILLDFN---GLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCV 1430 (1509)
T ss_pred             CceecCCCccceeeecC---CcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccce
Confidence            99999999999999876   89999999999988776411 12224678999999999997654   4568999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.||+||+.||..+  ++....+.++..+..+    .++..++..-+++|..||..||..|.++.|+++
T Consensus      1431 VlEM~tGkrPW~~~--dne~aIMy~V~~gh~P----q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1431 VLEMATGKRPWAEL--DNEWAIMYHVAAGHKP----QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             EEEeecCCCchhhc--cchhHHHhHHhccCCC----CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            99999999999987  4456666666666544    334568999999999999999999998887765

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=8.3e-36  Score=240.93  Aligned_cols=213  Identities=21%  Similarity=0.310  Sum_probs=168.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQY----CSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+|+.++.++.+||||+++++++..+...+++||++++++.++...    ....+++..+..++.|++.||+|||+
T Consensus        46 ~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~  125 (288)
T cd06616          46 QKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE  125 (288)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            45688999999999889999999999998888999999998787766542    14679999999999999999999997


Q ss_pred             -CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC---CCCCcchHHHHHH
Q psy2769          86 -KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL---DQSPRDDLEALCY  161 (257)
Q Consensus        86 -~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slg~  161 (257)
                       .|++|+||+|+||+++.+   +.++|+|||++.........    ....++..|+|||.+.+.   .++.++||||+|+
T Consensus       126 ~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~  198 (288)
T cd06616         126 ELKIIHRDVKPSNILLDRN---GNIKLCDFGISGQLVDSIAK----TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGI  198 (288)
T ss_pred             cCCeeccCCCHHHEEEccC---CcEEEeecchhHHhccCCcc----ccccCccCccCHHHhccccccCCcchhhhhHHHH
Confidence             499999999999999766   88999999998655432111    334578899999999776   5788999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|+|++|..||....  .....+..+.....+.........++..+.+++.+||+.+|++||+++++++
T Consensus       199 il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         199 TLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             HHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999998643  2222222222111111111122358889999999999999999999999876

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG0199|consensus

Probab=100.00  E-value=1.3e-36  Score=255.20  Aligned_cols=213  Identities=17%  Similarity=0.242  Sum_probs=181.6

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +....|++|+.++.+|+ |||++++||...+ ....+|+|++ .|||.+.++.. ...|-......++.||+.|+.||..
T Consensus       153 ~~mddflrEas~M~~L~-H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes  230 (1039)
T KOG0199|consen  153 AIMDDFLREASHMLKLQ-HPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES  230 (1039)
T ss_pred             hhHHHHHHHHHHHHhcc-CcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh
Confidence            35678999999999999 9999999999987 5689999999 99999999973 4568889999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      ++++||||..+|+++...   ..|||+|||+.+.+..+...........-...|.|||.++...++.++|||++||++||
T Consensus       231 krlvHRDLAARNlllasp---rtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWE  307 (1039)
T KOG0199|consen  231 KRLVHRDLAARNLLLASP---RTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWE  307 (1039)
T ss_pred             hhhhhhhhhhhhheeccc---ceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHh
Confidence            999999999999999765   78999999999887776544433344556779999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      |++ |+-||.++......+.+.   .+. ....   +..||+.++++++.||+.+|++||++..|.+.
T Consensus       308 MFtyGEePW~G~~g~qIL~~iD---~~e-rLpR---Pk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  308 MFTYGEEPWVGCRGIQILKNID---AGE-RLPR---PKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             hhccCCCCCCCCCHHHHHHhcc---ccc-cCCC---CCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            999 899999976555444433   221 1121   27899999999999999999999999999743

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.3e-35  Score=239.56  Aligned_cols=211  Identities=24%  Similarity=0.330  Sum_probs=165.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeee-----eCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGT-----SGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~-----~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ..+.+|+.++.++.+||||+++++++.     .+...+++|||+ +++|.+++...   ...+++..+..++.|++.||.
T Consensus        59 ~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~  138 (286)
T cd06638          59 EEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ  138 (286)
T ss_pred             HHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence            467889999999977999999999874     345789999999 99999987632   356889999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----CCCCCcchH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----LDQSPRDDL  156 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~Dv  156 (257)
                      +||+.+++|+||+|+||+++.+   +.++++|||++........   ......++..|+|||.+..     ..++.++|+
T Consensus       139 ~lH~~~i~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv  212 (286)
T cd06638         139 HLHVNKTIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDV  212 (286)
T ss_pred             HHHhCCccccCCCHHhEEECCC---CCEEEccCCceeecccCCC---ccccccCCCcccChhhhchhhhccccccchhhh
Confidence            9999999999999999999866   7899999999876543211   1134468899999999853     346789999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      ||+|+++|+|++|..||......   ..+.......  ......+..++..+.+++.+||+.+|++||++.++++.
T Consensus       213 ~slGvi~~el~~g~~p~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         213 WSLGITAIELGDGDPPLADLHPM---RALFKIPRNP--PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             hhHHHHHHHHhcCCCCCCCCchh---HHHhhccccC--CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            99999999999999999875322   1111111111  11111123467889999999999999999999998763

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2.8e-35  Score=237.53  Aligned_cols=208  Identities=21%  Similarity=0.314  Sum_probs=170.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. |||++++++++...+..++++||+ +++|.+++..  ..++...+..++.|++.||++||+.|+
T Consensus        60 ~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i  136 (285)
T cd06648          60 RELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGV  136 (285)
T ss_pred             HHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            345788999999997 999999999999999999999999 9999999884  578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+........   ......++..|+|||.+.+..++.++|+||+|+++++|++
T Consensus       137 ~H~dl~p~Nil~~~~---~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~  210 (285)
T cd06648         137 IHRDIKSDSILLTSD---GRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVD  210 (285)
T ss_pred             ecCCCChhhEEEcCC---CcEEEcccccchhhccCCc---ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHh
Confidence            999999999999766   8999999998765433211   1133468889999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||....   .......+.....  ........++..+.+++++||+.+|++||++.++++
T Consensus       211 g~~p~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         211 GEPPYFNEP---PLQAMKRIRDNLP--PKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             CCCCCcCCC---HHHHHHHHHhcCC--CCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            999997632   2333333322211  111112347889999999999999999999998875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=6.5e-36  Score=242.62  Aligned_cols=209  Identities=21%  Similarity=0.311  Sum_probs=172.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++..+. |||++++++++..++..++++||+ +++|.+++.  ...+++..+..++.|++.||.+||+.|
T Consensus        61 ~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~  137 (297)
T cd06659          61 RRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQG  137 (297)
T ss_pred             hHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEEEEecCCCCCHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456889999999997 999999999999999999999999 899998776  457899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||++........   ......++..|+|||.+.+..++.++|+||+|+++++|+
T Consensus       138 ivH~dl~p~Nill~~~---~~~kL~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~  211 (297)
T cd06659         138 VIHRDIKSDSILLTLD---GRVKLSDFGFCAQISKDVP---KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMV  211 (297)
T ss_pred             eecCCCCHHHeEEccC---CcEEEeechhHhhcccccc---cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999766   8999999998865433221   113456889999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||....   ....+..+....  .........+++.+.+++++||..+|++||+++++++
T Consensus       212 ~g~~p~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         212 DGEPPYFSDS---PVQAMKRLRDSP--PPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             hCCCCCCCCC---HHHHHHHHhccC--CCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            9999998632   222222222211  1112223567889999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.4e-35  Score=243.79  Aligned_cols=219  Identities=15%  Similarity=0.178  Sum_probs=166.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      +.+.+|+.+++.+. ||||+++++++..++..++|+||+ +++|.+++... ...+++..+..++.|++.||.|||+.|+
T Consensus        44 ~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  122 (327)
T cd08227          44 TFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY  122 (327)
T ss_pred             HHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            45778999999997 999999999999999999999999 99999999754 3458999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC----CCccCCCCcccccChhHhcC--CCCCCcchHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR----IRTRGLTGTARYASVNAHQW--LDQSPRDDLEALCYT  162 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~--~~~~~~~Dv~slg~~  162 (257)
                      +|+||||+||+++.+   +.++++||+............    .......++..|+|||++.+  ..++.++||||+|++
T Consensus       123 iH~dlkp~Nil~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~i  199 (327)
T cd08227         123 VHRSVKASHILISVD---GKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT  199 (327)
T ss_pred             ecCCCChhhEEEecC---CcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHH
Confidence            999999999999876   789999998654332211100    00122346778999999976  357899999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhC-----------------------------------------Chhhhh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTM-----------------------------------------TPEAIC  201 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~  201 (257)
                      +|+|++|..||..........   .......+.                                         ......
T Consensus       200 l~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (327)
T cd08227         200 ACELANGHVPFKDMPATQMLL---EKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYN  276 (327)
T ss_pred             HHHHHHCCCCCCCcchhHHHH---HHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccc
Confidence            999999999998643322110   000000000                                         000111


Q ss_pred             cCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHH
Q psy2769         202 EGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNL  236 (257)
Q Consensus       202 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~  236 (257)
                      ..+++.+.+++.+||..||++|||++++++  .++++
T Consensus       277 ~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         277 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             cccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence            245778999999999999999999999986  45544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2.4e-35  Score=235.66  Aligned_cols=209  Identities=22%  Similarity=0.269  Sum_probs=166.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      +.+.+|+.+++++. ||||+++++++..  ....++++|++ +++|.+.+.. ...++......++.|++.||.+||+.|
T Consensus        49 ~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~  126 (266)
T cd06651          49 SALECEIQLLKNLQ-HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNM  126 (266)
T ss_pred             HHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            46888999999998 9999999998865  35688999999 8999999874 456899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++|+||+|+++|+++
T Consensus       127 i~H~~l~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~  203 (266)
T cd06651         127 IVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEML  203 (266)
T ss_pred             eeeCCCCHHHEEECCC---CCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHH
Confidence            9999999999999765   7899999999875533221111223345788999999999888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.....   ...+...   ......+..+..+++.+.+++ .||..+|++||+++++++
T Consensus       204 ~g~~pf~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         204 TEKPPWAEYEA---MAAIFKI---ATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             HCCCCccccch---HHHHHHH---hcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            99999986422   2222221   111122333456788899999 677799999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=4e-36  Score=250.10  Aligned_cols=208  Identities=19%  Similarity=0.212  Sum_probs=165.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++..+. ||+|+++++.+.+....|+||||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|
T Consensus        44 ~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~g  121 (360)
T cd05627          44 QVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQLG  121 (360)
T ss_pred             hHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456788999999997 999999999999999999999999 9999999874 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC--------------------------------CCCccCCCC
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP--------------------------------RIRTRGLTG  135 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~--------------------------------~~~~~~~~~  135 (257)
                      ++||||||+||+++.+   +.++|+|||++.........                                ........|
T Consensus       122 ivHrDLkp~NIli~~~---~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  198 (360)
T cd05627         122 FIHRDIKPDNLLLDAK---GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVG  198 (360)
T ss_pred             eEccCCCHHHEEECCC---CCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCC
Confidence            9999999999999766   89999999987644221100                                000123468


Q ss_pred             cccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHH
Q psy2769         136 TARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC  215 (257)
Q Consensus       136 ~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  215 (257)
                      |+.|+|||++.+..++.++|+|||||++|+|++|..||.....   ...+..+.........+. ...+++.+.++|.+|
T Consensus       199 t~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~---~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l  274 (360)
T cd05627         199 TPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP---QETYRKVMNWKETLVFPP-EVPISEKAKDLILRF  274 (360)
T ss_pred             CccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCH---HHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHh
Confidence            9999999999999999999999999999999999999987433   333333332211111111 124788999999998


Q ss_pred             hcCCCCCCCCh
Q psy2769         216 RGLAFSEEPNY  226 (257)
Q Consensus       216 l~~~p~~Rp~~  226 (257)
                      + .+|.+|++.
T Consensus       275 ~-~~p~~R~~~  284 (360)
T cd05627         275 C-TDSENRIGS  284 (360)
T ss_pred             c-cChhhcCCC
Confidence            7 599999964

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=3.2e-35  Score=239.72  Aligned_cols=212  Identities=21%  Similarity=0.318  Sum_probs=167.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR-KK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~   87 (257)
                      ..++.+|+.+++++. ||||+++++++..++..++++||+ +++|.+++.. ...+++..+..++.|++.||.|||+ .+
T Consensus        43 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~  120 (308)
T cd06615          43 RNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPENILGKISIAVLRGLTYLREKHK  120 (308)
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence            346889999999997 999999999999999999999999 8999999985 4678999999999999999999997 69


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.......     .....++..|+|||.+.+..++.++|+||||+++++|+
T Consensus       121 i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~  192 (308)
T cd06615         121 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMA  192 (308)
T ss_pred             EEECCCChHHEEEecC---CcEEEccCCCcccccccc-----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHH
Confidence            9999999999999766   889999999876543221     13456889999999998888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHH-----------------------------HHHHHhhCChhhhh-cCCcHHHHHHHHHHhc
Q psy2769         168 RGKLPWQSIKSDNEETRMQR-----------------------------VTEMKLTMTPEAIC-EGTPPEFAEFLRYCRG  217 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~  217 (257)
                      +|..||...........+..                             ..........+..+ ..++..+.+++.+||.
T Consensus       193 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  272 (308)
T cd06615         193 IGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLK  272 (308)
T ss_pred             hCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHcc
Confidence            99999975332111111000                             00000000011111 2367889999999999


Q ss_pred             CCCCCCCChHHHHH
Q psy2769         218 LAFSEEPNYGKLRD  231 (257)
Q Consensus       218 ~~p~~Rp~~~~~~~  231 (257)
                      .+|++||++.+++.
T Consensus       273 ~~P~~Rpt~~~ll~  286 (308)
T cd06615         273 KNPKERADLKELTK  286 (308)
T ss_pred             CChhhCcCHHHHhc
Confidence            99999999998876

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.2e-35  Score=234.48  Aligned_cols=208  Identities=19%  Similarity=0.189  Sum_probs=172.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+|+.+++++. ||||+++.+++...+..++++||+ +++|.+.+... ...+++.++..++.|++.|+.+||+.|
T Consensus        43 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08218          43 REESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK  121 (256)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            347889999999998 999999999999999999999999 99999998753 346889999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++++|||.+........   ......+++.|+|||.+.+...+.++|+||||+++++++
T Consensus       122 i~h~~l~~~nil~~~~---~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~  195 (256)
T cd08218         122 ILHRDIKSQNIFLTKD---GTIKLGDFGIARVLNSTVE---LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMC  195 (256)
T ss_pred             EecCCCCHHHEEEcCC---CCEEEeeccceeecCcchh---hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHH
Confidence            9999999999999765   7899999999876543221   113345788899999999888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||...   +.......+....    .+.....++..+.++|.+||+.+|++||++.++++
T Consensus       196 ~g~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         196 TLKHAFEAG---NMKNLVLKIIRGS----YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             cCCCCccCC---CHHHHHHHHhcCC----CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            999999763   2333333322222    22233568899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.6e-35  Score=236.83  Aligned_cols=214  Identities=19%  Similarity=0.312  Sum_probs=170.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR-K   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~   86 (257)
                      ....+.+|+.++..+. ||||+++++++......++|+||+ +++|.+++.. .+.++...+..++.+++.||.|||+ .
T Consensus        46 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~  123 (284)
T cd06620          46 VRKQILRELQIMHECR-SPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVH  123 (284)
T ss_pred             HHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            3467889999999998 999999999999999999999999 9999998874 4578999999999999999999996 6


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||++.......     .....++..|+|||.+.+..++.++|+||+|+++|++
T Consensus       124 ~i~H~dl~p~nil~~~~---~~~~l~d~gl~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l  195 (284)
T cd06620         124 RIMHRDIKPSNILVNSR---GQIKLCDFGVSGELINSI-----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIEL  195 (284)
T ss_pred             CeeccCCCHHHEEECCC---CcEEEccCCcccchhhhc-----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHH
Confidence            99999999999999765   889999999876542221     1334688999999999888889999999999999999


Q ss_pred             HhCCCCCCCCCCcc----HHHHHHHHHHHHhhCChhhhh-cCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         167 LRGKLPWQSIKSDN----EETRMQRVTEMKLTMTPEAIC-EGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       167 ~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      ++|..||.......    ....+............+... ..++..+.+++.+||..||++||+++++++.
T Consensus       196 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         196 ALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             HhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            99999998654321    011111111111111111111 2378889999999999999999999998864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.2e-35  Score=239.81  Aligned_cols=209  Identities=18%  Similarity=0.307  Sum_probs=170.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh-
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC--SKRFSLKTVLMLADQMISRLEHVHR-   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~-   85 (257)
                      ...+.+|+.+++++. ||||+++++.+...+..++++||+ +++|.+++...  ...+++..+..++.|++.||.|||+ 
T Consensus        43 ~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~  121 (286)
T cd06622          43 FNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE  121 (286)
T ss_pred             HHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            457889999999997 999999999999999999999999 99998888743  2378999999999999999999996 


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC------CCCcchHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD------QSPRDDLEAL  159 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~------~~~~~Dv~sl  159 (257)
                      .|++|+||+|+||+++.+   +.++|+|||.+.......     .....++..|+|||.+.+..      ++.++|+||+
T Consensus       122 ~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Diwsl  193 (286)
T cd06622         122 HNIIHRDVKPTNVLVNGN---GQVKLCDFGVSGNLVASL-----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSL  193 (286)
T ss_pred             CCEeeCCCCHHHEEECCC---CCEEEeecCCcccccCCc-----cccCCCccCccCcchhcCCCCCccCCCCcccchHhH
Confidence            699999999999999765   889999999886543221     13345788999999986543      4789999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+++|+|++|..||...........+..+..    ...+..+..++..+.+++.+||..+|++||+++++++
T Consensus       194 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         194 GLSILEMALGRYPYPPETYANIFAQLSAIVD----GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             HHHHHHHHhCCCCCCCcchhhHHHHHHHHhh----cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            9999999999999976433332222222221    2233344668999999999999999999999999887

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG2345|consensus

Probab=100.00  E-value=6.9e-37  Score=228.34  Aligned_cols=222  Identities=18%  Similarity=0.223  Sum_probs=174.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeee-----CCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTS-----GDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMIS   78 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-----~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~   78 (257)
                      ...+..++|++..++++ |||+++++++...     +...|++++|. .|||.+.++..   +..+++.++..++.+++.
T Consensus        60 ~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~  138 (302)
T KOG2345|consen   60 EDIEEALREIDNHRKFN-SPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICR  138 (302)
T ss_pred             HHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHH
Confidence            56778999999999999 8999999997653     33589999999 99999999976   447999999999999999


Q ss_pred             HHHHHHhCC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC------CccCCCCcccccChhHhcCC--
Q psy2769          79 RLEHVHRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI------RTRGLTGTARYASVNAHQWL--  148 (257)
Q Consensus        79 ~l~~lh~~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~--  148 (257)
                      ||.+||+..  +.|+||||.||++..+   +.++++|||.+....-......      .......|..|.|||.+.-.  
T Consensus       139 gL~~lH~~~~~yAH~DiKP~NILls~~---~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~  215 (302)
T KOG2345|consen  139 GLEALHEKEPPYAHRDIKPANILLSDS---GLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSH  215 (302)
T ss_pred             HHHHHhccCCcccccCCCcceeEecCC---CceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccC
Confidence            999999999  9999999999999765   8999999999864322211000      01234588999999998644  


Q ss_pred             -CCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         149 -DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       149 -~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                       ..+.++|||||||++|.|+.|..||.........-.+ .+.......+..   +.+|+.+.++|+.|+..||.+||++.
T Consensus       216 ~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL-Av~n~q~s~P~~---~~yse~l~~lik~mlqvdP~qRP~i~  291 (302)
T KOG2345|consen  216 CTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL-AVQNAQISIPNS---SRYSEALHQLIKSMLQVDPNQRPTIP  291 (302)
T ss_pred             cccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE-eeeccccccCCC---CCccHHHHHHHHHHhcCCcccCCCHH
Confidence             4588999999999999999999999864332111100 011112222211   45899999999999999999999999


Q ss_pred             HHHHHHHHHH
Q psy2769         228 KLRDSFRNLL  237 (257)
Q Consensus       228 ~~~~~l~~~~  237 (257)
                      +++..+.+++
T Consensus       292 ~ll~~~d~Li  301 (302)
T KOG2345|consen  292 ELLSKLDDLI  301 (302)
T ss_pred             HHHHHHHhhc
Confidence            9999887764

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=4.8e-35  Score=234.57  Aligned_cols=212  Identities=20%  Similarity=0.338  Sum_probs=169.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|+.++..+. |||++++++++......++|+||+ +++|.+++.. ...++...+..++.|++.||.+||+.|++
T Consensus        53 ~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~  130 (272)
T cd06629          53 KALRSEIETLKDLD-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRT-YGRFEEQLVRFFTEQVLEGLAYLHSKGIL  130 (272)
T ss_pred             HHHHHHHHHHHhcC-CCCcceEEEEeccCCceEEEEecCCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence            45788999999998 999999999999999999999999 9999999985 35789999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC--CCCcchHHHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD--QSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Dv~slg~~l~~l~  167 (257)
                      |+||+|+||+++.+   +.++++|||.+......... .......++..|+|||.+....  ++.++|+||+|+++++++
T Consensus       131 H~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~  206 (272)
T cd06629         131 HRDLKADNLLVDAD---GICKISDFGISKKSDDIYDN-DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMF  206 (272)
T ss_pred             ecCCChhhEEEcCC---CeEEEeeccccccccccccc-cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHH
Confidence            99999999999765   89999999998654322111 1113446788999999987654  788999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHH-hhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMK-LTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.....   ......+.... ....+......++..+.+++.+||+.+|++||+++++++
T Consensus       207 ~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         207 AGRRPWSDEEA---IAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             hCCCCCcCcch---HHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            99999975322   22222221111 111222333567899999999999999999999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=2e-35  Score=234.59  Aligned_cols=209  Identities=21%  Similarity=0.235  Sum_probs=172.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.+++++. ||+++++++.+..+...++|+|++ +++|.+++... ...+++..+..++.+++.|+.+||+.
T Consensus        42 ~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~  120 (256)
T cd08220          42 ERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK  120 (256)
T ss_pred             HHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3457889999999998 999999999999888999999999 99999999864 34589999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+  .+.++++|||.+........    .....++..|+|||.+.+...+.++|+||+|+++|+|
T Consensus       121 ~i~h~dl~~~nil~~~~--~~~~~l~d~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l  194 (256)
T cd08220         121 LILHRDLKTQNILLDKH--KMVVKIGDFGISKILSSKSK----AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYEL  194 (256)
T ss_pred             CeecCCCCHHHEEEcCC--CCEEEEccCCCceecCCCcc----ccccccCCcccCchhccCCCCCcccchHHHHHHHHHH
Confidence            99999999999999743  25789999999876644321    1345678899999999988889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||......   .....+..    .........+++.+.+++.+||..+|++|||+.+++.
T Consensus       195 ~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         195 ASLKRAFEAANLP---ALVLKIMS----GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HhCCCCcccCchH---HHHHHHHh----cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            9999999764322   22222221    1122233568899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-35  Score=238.42  Aligned_cols=212  Identities=17%  Similarity=0.189  Sum_probs=164.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      ..+.+|+.+++.+. ||||+++++++..+...++||||++++|.+++......+++..+..++.|++.||.|||+.|++|
T Consensus        48 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H  126 (291)
T cd07844          48 FTAIREASLLKDLK-HANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLH  126 (291)
T ss_pred             hhHHHHHHHHhhCC-CcceeeEEEEEecCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            45678999999998 99999999999999999999999977999988865667899999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHhC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      +||+|+||+++.+   +.++|+|||.+..........   ....++..|+|||.+.+ ..++.++||||+|+++|+|++|
T Consensus       127 ~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g  200 (291)
T cd07844         127 RDLKPQNLLISER---GELKLADFGLARAKSVPSKTY---SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATG  200 (291)
T ss_pred             ccCCHHHEEEcCC---CCEEECccccccccCCCCccc---cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhC
Confidence            9999999999766   889999999886543221111   22346788999999876 4578899999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhh-------------------------CChhhhhcCCc--HHHHHHHHHHhcCCCCC
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLT-------------------------MTPEAICEGTP--PEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~--~~~~~li~~~l~~~p~~  222 (257)
                      ..||......  .+....+......                         .........++  ..+.+++.+||+.+|++
T Consensus       201 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~  278 (291)
T cd07844         201 RPLFPGSTDV--EDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKK  278 (291)
T ss_pred             CCCCCCCccH--HHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCccc
Confidence            9999764321  1111111110000                         00001112334  77899999999999999


Q ss_pred             CCChHHHHH
Q psy2769         223 EPNYGKLRD  231 (257)
Q Consensus       223 Rp~~~~~~~  231 (257)
                      ||++.+++.
T Consensus       279 Rps~~e~l~  287 (291)
T cd07844         279 RISAAEAMK  287 (291)
T ss_pred             ccCHHHHhc
Confidence            999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1.6e-35  Score=239.05  Aligned_cols=210  Identities=23%  Similarity=0.332  Sum_probs=171.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. |+|++++++++......++++||+ +++|.+++......++...+..++.|++.||++||+.|+
T Consensus        59 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi  137 (286)
T cd06614          59 KELIINEILIMKDCK-HPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNV  137 (286)
T ss_pred             HHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            557889999999998 999999999999999999999999 899999999644479999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+........   ......++..|++||.+.+..++.++|+||||+++|+|++
T Consensus       138 ~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~  211 (286)
T cd06614         138 IHRDIKSDNILLSKD---GSVKLADFGFAAQLTKEKS---KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAE  211 (286)
T ss_pred             eeCCCChhhEEEcCC---CCEEECccchhhhhccchh---hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHh
Confidence            999999999999866   8899999998765433211   1123457789999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||......   .....+....  .........++..+.++|.+||+.+|.+||++.++++
T Consensus       212 g~~p~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         212 GEPPYLREPPL---RALFLITTKG--IPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             CCCCCCCCCHH---HHHHHHHhcC--CCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            99999864322   2212221111  1111112348899999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=5e-35  Score=238.33  Aligned_cols=216  Identities=21%  Similarity=0.219  Sum_probs=170.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++.+..+...+++|||+ +++|.+++.. ...+++..+..++.|++.||.|+|+.|+
T Consensus        45 ~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i  122 (305)
T cd05609          45 IQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGI  122 (305)
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            346778999999997 999999999999999999999999 9999999974 4578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC------------CCCccCCCCcccccChhHhcCCCCCCcchH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP------------RIRTRGLTGTARYASVNAHQWLDQSPRDDL  156 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv  156 (257)
                      +|+||+|+||+++.+   +.++++|||.+.........            ........++..|+|||.+.+...+.++|+
T Consensus       123 ~H~dl~p~NIll~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di  199 (305)
T cd05609         123 VHRDLKPDNLLITSM---GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDW  199 (305)
T ss_pred             cccCCchHHEEECCC---CCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhH
Confidence            999999999999765   88999999987532111000            000012356788999999988888999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ||||+++|++++|..||.+..   ..+...........  .+.....+|..+.+++.+||+.+|++||+...+.+.++.
T Consensus       200 ~slG~vl~el~~g~~pf~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         200 WAMGIILYEFLVGCVPFFGDT---PEELFGQVISDDIE--WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhcccC--CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            999999999999999998642   33333333322212  112223678999999999999999999997666665554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=9e-36  Score=237.81  Aligned_cols=210  Identities=23%  Similarity=0.396  Sum_probs=172.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR-K   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~   86 (257)
                      ..+.+.+|+.+++++. ||||+++++.+......++++|++ +++|.+++......+++..+..++.|++.||.++|+ .
T Consensus        42 ~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  120 (265)
T cd06605          42 IQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH  120 (265)
T ss_pred             HHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence            3457889999999998 999999999999999999999999 799999998655789999999999999999999999 9


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+........     ....++..|+|||.+.+..++.++|+||+|+++++|
T Consensus       121 ~i~H~dl~~~ni~~~~~---~~~~l~d~g~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l  192 (265)
T cd06605         121 KIIHRDVKPSNILVNSR---GQIKLCDFGVSGQLVNSLA-----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIEL  192 (265)
T ss_pred             CeecCCCCHHHEEECCC---CCEEEeecccchhhHHHHh-----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence            99999999999999865   8899999998765432211     225678899999999998899999999999999999


Q ss_pred             HhCCCCCCCCCCc--cHHHHHHHHHHHHhhCChhhhhcC-CcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSD--NEETRMQRVTEMKLTMTPEAICEG-TPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||......  ........+...    ..+..... ++..+.++|.+||..+|++||++.+++.
T Consensus       193 ~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         193 ATGRFPYPPENDPPDGIFELLQYIVNE----PPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HhCCCCCCccccccccHHHHHHHHhcC----CCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            9999999765321  122222222211    12222222 7889999999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.2e-34  Score=233.38  Aligned_cols=212  Identities=19%  Similarity=0.207  Sum_probs=165.6

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ...+|+.++.++.+|||++++++++.+.  +..++|+||+++++.+.+......+++.++..++.|++.||.+||+.|++
T Consensus        43 ~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~  122 (282)
T cd07831          43 NNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIF  122 (282)
T ss_pred             hHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence            3457999999998899999999999877  88999999997799988885556789999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.    +.++|+|||.+.........    ....++..|+|||.+.. ...+.++|+||+|+++|+|++
T Consensus       123 H~dl~p~ni~l~~----~~~kl~dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~  194 (282)
T cd07831         123 HRDIKPENILIKD----DILKLADFGSCRGIYSKPPY----TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS  194 (282)
T ss_pred             ecccCHHHEEEcC----CCeEEEecccccccccCCCc----CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHc
Confidence            9999999999964    78999999998765432211    23457889999998754 446889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHH-------H------hhC--------ChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEM-------K------LTM--------TPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~-------~------~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      |..||...+..+....+......       .      ...        ........+|..+.++|.+||+.+|++||+++
T Consensus       195 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  274 (282)
T cd07831         195 LFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAK  274 (282)
T ss_pred             CCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHH
Confidence            99999874332211111110000       0      000        01112246789999999999999999999999


Q ss_pred             HHHH
Q psy2769         228 KLRD  231 (257)
Q Consensus       228 ~~~~  231 (257)
                      +++.
T Consensus       275 ~~l~  278 (282)
T cd07831         275 QALR  278 (282)
T ss_pred             HHhh
Confidence            8875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG4279|consensus

Probab=100.00  E-value=8.8e-37  Score=256.42  Aligned_cols=214  Identities=23%  Similarity=0.286  Sum_probs=181.0

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRF--SLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~l   83 (257)
                      ....|-+..|+.+-++|+ |.||++++|.+..++++-+.||-+ ||||.++++..=+++  .+.++..+..||+.||.||
T Consensus       613 sr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYL  691 (1226)
T KOG4279|consen  613 SREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYL  691 (1226)
T ss_pred             chhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhh
Confidence            345677889999999999 999999999999999999999999 999999999653344  7889999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC--CCCCcchHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL--DQSPRDDLEALCY  161 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slg~  161 (257)
                      |+..|||||||-+|++++.  ..|.+||+|||-+..+...+   +.+.++.||.-|||||++..+  +|+..+|||||||
T Consensus       692 Hen~IVHRDIKGDNVLvNT--ySGvlKISDFGTsKRLAgin---P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GC  766 (1226)
T KOG4279|consen  692 HENKIVHRDIKGDNVLVNT--YSGVLKISDFGTSKRLAGIN---PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGC  766 (1226)
T ss_pred             hhcceeeccccCCcEEEee--ccceEEecccccchhhccCC---ccccccccchhhhChHhhccCCcCCCchhhhhhccc
Confidence            9999999999999999984  44899999999998876543   244889999999999999766  4789999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++.||.||++||..+....  ..+.++.   ..-..++++..++.+.+++|.+|+.+||.+||++.+++.
T Consensus       767 T~vEMATGrPPF~Elgspq--AAMFkVG---myKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  767 TMVEMATGRPPFVELGSPQ--AAMFKVG---MYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             eeEeeccCCCCeeecCChh--Hhhhhhc---ceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            9999999999999875432  2222221   112345556778889999999999999999999998864

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=4e-35  Score=233.06  Aligned_cols=208  Identities=23%  Similarity=0.346  Sum_probs=172.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.++. ||+|+++++++......++++||+ +++|.+++.. ...+++..+..++.|++.||++||+.|
T Consensus        45 ~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (258)
T cd06632          45 AVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLGLEYLHDRN  122 (258)
T ss_pred             HHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3457889999999997 999999999999989999999999 8999999984 456899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.......    ......++..|++||.+.... ++.++|+||+|+++|+|
T Consensus       123 i~H~dl~~~ni~~~~~---~~~kl~d~~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l  195 (258)
T cd06632         123 TVHRDIKGANILVDTN---GVVKLADFGMAKQVVEFS----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEM  195 (258)
T ss_pred             cccCCCCHHHEEECCC---CCEEEccCccceeccccc----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHH
Confidence            9999999999999766   889999999887654332    113456788999999987766 88999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   .......+..   ....+..+..+++.+.+++.+||..+|++||++.+++.
T Consensus       196 ~~g~~pf~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         196 ATGKPPWSQLE---GVAAVFKIGR---SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HhCCCCcccCc---HHHHHHHHHh---cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            99999998754   2222222211   11223334678899999999999999999999998864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=5.9e-35  Score=235.61  Aligned_cols=213  Identities=20%  Similarity=0.212  Sum_probs=171.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.+++++. ||||+++++++......++|+||++++|.+++......+++..+..++.|++.||.+||+.|++
T Consensus        43 ~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~  121 (286)
T cd07832          43 PNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIM  121 (286)
T ss_pred             hHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            457889999999998 9999999999999999999999999999999986567799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++++|||.+........  .......++..|+|||.+.+. ..+.++||||+|+++++|++
T Consensus       122 H~dl~p~ni~~~~~---~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~t  196 (286)
T cd07832         122 HRDLKPANLLISAD---GVLKIADFGLARLFSEEEP--RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLN  196 (286)
T ss_pred             cCCcCHHHEEEcCC---CcEEEeeeeecccccCCCC--CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHc
Confidence            99999999999865   8899999999876544321  111345688899999998654 35889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhh-------------------------CChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLT-------------------------MTPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      |.+||.....   ...+..+......                         .......+..+..+.+++++||..+|++|
T Consensus       197 g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  273 (286)
T cd07832         197 GSPLFPGEND---IEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKR  273 (286)
T ss_pred             CCcCcCCCCH---HHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhC
Confidence            9888876332   2222222111000                         00112234677899999999999999999


Q ss_pred             CChHHHHH
Q psy2769         224 PNYGKLRD  231 (257)
Q Consensus       224 p~~~~~~~  231 (257)
                      |++++++.
T Consensus       274 ~~~~~~l~  281 (286)
T cd07832         274 LSAAEALR  281 (286)
T ss_pred             CCHHHHhh
Confidence            99998875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=3.4e-35  Score=236.11  Aligned_cols=207  Identities=25%  Similarity=0.279  Sum_probs=167.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.++++++ ||+++++++.+...+..|+|+||+ +++|.+.+.... ..+++..+..++.|++.||.+||+.|
T Consensus        37 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  115 (277)
T cd05577          37 EQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR  115 (277)
T ss_pred             hHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            445678999999998 999999999999989999999999 899999987543 36899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.......    ......++..|+|||.+.+..++.++|+||+|+++++|+
T Consensus       116 i~H~di~p~Nil~~~~---~~~~l~dfg~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~  188 (277)
T cd05577         116 IVYRDLKPENVLLDDH---GNVRISDLGLAVELKGGK----KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI  188 (277)
T ss_pred             cccCCCCHHHEEECCC---CCEEEccCcchhhhccCC----ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHh
Confidence            9999999999999766   889999999886543311    113446778999999998888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGK  228 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  228 (257)
                      +|..||...........+...   .. ......+..+++.+.++|.+||+.+|++||+..+
T Consensus       189 ~g~~p~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         189 AGRSPFRQRKEKVEKEELKRR---TL-EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             hCCCCCCCCcccccHHHHHhc---cc-cccccCCccCCHHHHHHHHHHccCChhHccCCCc
Confidence            999999875543222222111   11 1122233567999999999999999999994433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=6e-35  Score=232.80  Aligned_cols=211  Identities=25%  Similarity=0.332  Sum_probs=177.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR-K   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~   86 (257)
                      ..+.+.+|+.++.+++ ||+++++++++......++++||+ +++|.+++.. ...+++..+..++.|++.|+.++|+ .
T Consensus        42 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~  119 (264)
T cd06623          42 FRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKK-VGKIPEPVLAYIARQILKGLDYLHTKR  119 (264)
T ss_pred             HHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence            3567999999999999 999999999999999999999999 8999999985 4679999999999999999999999 9


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+..........   ....++..|+|||.+.+..++.++|+||||+++|+|
T Consensus       120 ~~~H~~l~~~ni~~~~~---~~~~l~df~~~~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l  193 (264)
T cd06623         120 HIIHRDIKPSNLLINSK---GEVKIADFGISKVLENTLDQC---NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLEC  193 (264)
T ss_pred             CCccCCCCHHHEEECCC---CCEEEccCccceecccCCCcc---cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHH
Confidence            99999999999999766   899999999987654432211   244678899999999988889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcC-CcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEG-TPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||..............+..    ...+..... +|..+.+++..||+.+|++||++.++++
T Consensus       194 ~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         194 ALGKFPFLPPGQPSFFELMQAICD----GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             HhCCCCCccccccCHHHHHHHHhc----CCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            999999988654333333333322    122222344 8899999999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=4.7e-35  Score=233.39  Aligned_cols=203  Identities=19%  Similarity=0.217  Sum_probs=168.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++.+. ||||+++++.+.++...++++||+ +++|.+++.. ...++...+..++.|++.||.++|+.|+
T Consensus        37 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~  114 (262)
T cd05572          37 QEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRGI  114 (262)
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            457889999999997 999999999999999999999999 9999999984 4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.......    ......++..|++||.+.+..++.++|+||+|+++|+|++
T Consensus       115 ~h~dl~~~nilv~~~---~~~~l~df~~~~~~~~~~----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~  187 (262)
T cd05572         115 IYRDLKPENLLLDSN---GYVKLVDFGFAKKLKSGQ----KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLT  187 (262)
T ss_pred             ccCCCCHHHEEEcCC---CCEEEeeCCcccccCccc----ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHh
Confidence            999999999999766   889999999987654432    1134567889999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      |..||..... +.......+....   .....+...++.+.+++.+||..+|++||+
T Consensus       188 g~~p~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~  240 (262)
T cd05572         188 GRPPFGEDDE-DPMEIYNDILKGN---GKLEFPNYIDKAAKDLIKQLLRRNPEERLG  240 (262)
T ss_pred             CCCCcCCCCC-CHHHHHHHHhccC---CCCCCCcccCHHHHHHHHHHccCChhhCcC
Confidence            9999987543 2233333332111   122233456889999999999999999998

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=3.9e-35  Score=239.20  Aligned_cols=204  Identities=21%  Similarity=0.267  Sum_probs=166.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      +.+.+|+.++..+. ||||+++.+++.++...++|+||+.+++.+.+......+++..+..++.|++.||.|||+.|++|
T Consensus        60 ~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H  138 (307)
T cd06607          60 QDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIH  138 (307)
T ss_pred             HHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence            46889999999998 99999999999999999999999988888888755667999999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHHHH
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +||+|+||+++.+   +.++|+|||++......       ....++..|+|||.+.   ...++.++||||||+++|+|+
T Consensus       139 ~dl~p~nIl~~~~---~~~kL~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~  208 (307)
T cd06607         139 RDIKAGNILLTEP---GTVKLADFGSASLVSPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA  208 (307)
T ss_pred             cCCCcccEEECCC---CCEEEeecCcceecCCC-------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHH
Confidence            9999999999766   88999999988654322       3346788999999874   345788999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.....   ......+....   .+......++..+.+++.+||..+|++||++.+++.
T Consensus       209 tg~~p~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         209 ERKPPLFNMNA---MSALYHIAQND---SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             cCCCCCCCccH---HHHHHHHhcCC---CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            99999976432   22222221111   111112347888999999999999999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.4e-35  Score=240.66  Aligned_cols=208  Identities=20%  Similarity=0.317  Sum_probs=170.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++..+...++||||+ +++|.+++.  ...++...+..++.|++.||.+||+.|+
T Consensus        60 ~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~i  136 (297)
T cd06656          60 KELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALDFLHSNQV  136 (297)
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEecCCEEEEeecccCCCCHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            356788999999997 999999999999999999999999 999999987  4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.........   .....+++.|+|||.+.+..++.++|+||+|+++|++++
T Consensus       137 ~H~dL~p~Nili~~~---~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~t  210 (297)
T cd06656         137 IHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE  210 (297)
T ss_pred             ccCCCCHHHEEECCC---CCEEECcCccceEccCCccC---cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHh
Confidence            999999999999765   88999999988765433211   133467889999999998888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.......   ....+..  ........+..+++.+.+++.+||..+|++||+++++++
T Consensus       211 g~~pf~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         211 GEPPYLNENPLR---ALYLIAT--NGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             CCCCCCCCCcch---heeeecc--CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999997643211   1111111  111111223567888999999999999999999999877

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-35  Score=234.78  Aligned_cols=208  Identities=21%  Similarity=0.299  Sum_probs=169.5

Q ss_pred             cccccHHHHHHHHHhc--CCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLH--GAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+.+|+.+++.+.  .||+++++++++..+...+++|||+ +++|.+++..  ..+++..+..++.|++.||.+||+
T Consensus        42 ~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~  119 (277)
T cd06917          42 DVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHK  119 (277)
T ss_pred             hHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3456889999999997  5999999999999988999999999 9999999873  478999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLV  164 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~  164 (257)
                      .|++|+||+|+||+++.+   +.++++|||.+.........   .....++..|+|||.+.+. .++.++|+||||+++|
T Consensus       120 ~~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~  193 (277)
T cd06917         120 VGVIHRDIKAANILVTNT---GNVKLCDFGVAALLNQNSSK---RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIY  193 (277)
T ss_pred             CCcccCCcCHHHEEEcCC---CCEEEccCCceeecCCCccc---cccccCCcceeCHHHhccCCccccchhHHHHHHHHH
Confidence            999999999999999865   88999999998766543311   1344688899999998754 4688999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhc-CCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICE-GTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|++|..||.......   ....+..    ...+.... .++..+.+++.+||..||++||++.++++
T Consensus       194 ~ll~g~~p~~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         194 EMATGNPPYSDVDAFR---AMMLIPK----SKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHhCCCCCCCCChhh---hhhcccc----CCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            9999999998643221   1111111    11122222 37889999999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1e-34  Score=232.13  Aligned_cols=201  Identities=18%  Similarity=0.257  Sum_probs=162.3

Q ss_pred             HHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q psy2769          16 ERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIK   94 (257)
Q Consensus        16 E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~   94 (257)
                      |+.....+.+||||+++++.+...+..++||||+ +++|.+++.. ...+++.++..++.|++.||.+||+.|++|+||+
T Consensus        58 e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~  136 (267)
T PHA03390         58 EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK-EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIK  136 (267)
T ss_pred             hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence            4444444556999999999999989999999999 9999999985 3489999999999999999999999999999999


Q ss_pred             CCceEeeccCCCC-eEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCC
Q psy2769          95 PDNFLMGVRENFN-TVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW  173 (257)
Q Consensus        95 ~~nili~~~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~  173 (257)
                      |+||+++.+   + .++++|||.+......       ....++..|+|||.+.+..++.++|+||+|+++++|++|..||
T Consensus       137 p~nil~~~~---~~~~~l~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~  206 (267)
T PHA03390        137 LENVLYDRA---KDRIYLCDYGLCKIIGTP-------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPF  206 (267)
T ss_pred             HHHEEEeCC---CCeEEEecCccceecCCC-------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence            999999866   5 8999999988765322       2345788999999999888999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-hHHHHH
Q psy2769         174 QSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-YGKLRD  231 (257)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-~~~~~~  231 (257)
                      .........  ........  .........+|+.+.++|.+||+.+|.+||+ ++++++
T Consensus       207 ~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        207 KEDEDEELD--LESLLKRQ--QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             CCCCcchhh--HHHHHHhh--cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            864332211  11111111  1122233578999999999999999999995 588763

>KOG0579|consensus

Probab=100.00  E-value=3.8e-36  Score=250.55  Aligned_cols=212  Identities=15%  Similarity=0.237  Sum_probs=178.5

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.-|++||..+. ||+|+++++.|...+.++++.||| ||-...++-..+..+++.++..+++|++.||.|||+.
T Consensus        71 EELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~  149 (1187)
T KOG0579|consen   71 EELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ  149 (1187)
T ss_pred             hHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc
Confidence            45678899999999999 999999999988888999999999 8888888887788999999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcchHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDDLEALCY  161 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slg~  161 (257)
                      +|+|||||..|||+..+   |.++|.|||.+.......   ...-.+.|||.|||||+..     ..+|+.++||||||+
T Consensus       150 ~iIHRDLKAGNiL~Tld---GdirLADFGVSAKn~~t~---qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGI  223 (1187)
T KOG0579|consen  150 NIIHRDLKAGNILLTLD---GDIRLADFGVSAKNKSTR---QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGI  223 (1187)
T ss_pred             chhhhhccccceEEEec---CcEeeecccccccchhHH---hhhccccCCcccccchheeeccccCCCchhhhhHHhhhh
Confidence            99999999999999988   899999999876543321   1225688999999999874     447899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++.+|..+.+|-...+   ....+.++.+...+  .-..++.++.+|.+++.+||..||+.||++.++++
T Consensus       224 TLIEMAqiEPPHheln---pMRVllKiaKSePP--TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  224 TLIEMAQIEPPHHELN---PMRVLLKIAKSEPP--TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             HHHHHhccCCCccccc---hHHHHHHHhhcCCC--cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            9999999999988753   33334444433222  22234678999999999999999999999998864

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=4.4e-35  Score=231.67  Aligned_cols=210  Identities=22%  Similarity=0.324  Sum_probs=173.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.++. ||+++++.+++..+...++++||+ +++|.+++......++...+..++.|++.||.+||+.|
T Consensus        40 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  118 (253)
T cd05122          40 KKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG  118 (253)
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            4567899999999999 999999999999989999999999 89999999864467999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+........    .....++..|++||.+.+...+.++|+||||+++++|+
T Consensus       119 i~h~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~  191 (253)
T cd05122         119 IIHRDIKAANILLTSD---GEVKLIDFGLSAQLSDTKA----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA  191 (253)
T ss_pred             EecCCCCHHHEEEccC---CeEEEeecccccccccccc----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHH
Confidence            9999999999999865   8999999999876644321    14456888999999999888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||......   ...........+  .......++..+.+++.+||..||++|||+.++++
T Consensus       192 ~g~~p~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         192 EGKPPYSELPPM---KALFKIATNGPP--GLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             hCCCCCCCCchH---HHHHHHHhcCCC--CcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            999999874322   222222111111  11111234888999999999999999999999874

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=6.2e-35  Score=260.81  Aligned_cols=211  Identities=18%  Similarity=0.242  Sum_probs=166.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ....+..|+.++..|. ||||++++++|..  ...+|+||||+ +++|.+++...   ...+++..++.++.||+.||.|
T Consensus        55 ~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaY  133 (1021)
T PTZ00266         55 EKSQLVIEVNVMRELK-HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAY  133 (1021)
T ss_pred             HHHHHHHHHHHHHHcC-CCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            3457889999999998 9999999998854  45689999999 99999999753   3579999999999999999999


Q ss_pred             HHhC-------CccccCCCCCceEeeccC--------------CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccC
Q psy2769          83 VHRK-------KIVHRDIKPDNFLMGVRE--------------NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS  141 (257)
Q Consensus        83 lh~~-------~i~H~dl~~~nili~~~~--------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~a  141 (257)
                      ||+.       +|+|+||||+||+++.+.              ..+.++|+|||++.......    ......+++.|+|
T Consensus       134 LHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s----~~~s~vGTp~YmA  209 (1021)
T PTZ00266        134 CHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES----MAHSCVGTPYYWS  209 (1021)
T ss_pred             HHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc----cccccCCCccccC
Confidence            9985       499999999999996421              12458999999987543321    1134568999999


Q ss_pred             hhHhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCC
Q psy2769         142 VNAHQWL--DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLA  219 (257)
Q Consensus       142 PE~~~~~--~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  219 (257)
                      ||++.+.  .++.++|||||||++|+|++|..||.....  ....+..+...    + .......+..+.+||..||..+
T Consensus       210 PEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~--~~qli~~lk~~----p-~lpi~~~S~eL~dLI~~~L~~d  282 (1021)
T PTZ00266        210 PELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN--FSQLISELKRG----P-DLPIKGKSKELNILIKNLLNLS  282 (1021)
T ss_pred             HHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc--HHHHHHHHhcC----C-CCCcCCCCHHHHHHHHHHhcCC
Confidence            9998643  478899999999999999999999976432  22222222211    1 1111457889999999999999


Q ss_pred             CCCCCChHHHHH
Q psy2769         220 FSEEPNYGKLRD  231 (257)
Q Consensus       220 p~~Rp~~~~~~~  231 (257)
                      |.+||++.+++.
T Consensus       283 PeeRPSa~QlL~  294 (1021)
T PTZ00266        283 AKERPSALQCLG  294 (1021)
T ss_pred             hhHCcCHHHHhc
Confidence            999999999974

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=3.1e-35  Score=237.61  Aligned_cols=229  Identities=19%  Similarity=0.234  Sum_probs=179.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++.+||+|+++++.+..+...++||||+ +++|.+.+.. ...+++..+..++.|++.||.+||+.|+
T Consensus        48 ~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~  126 (288)
T cd05583          48 AEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGI  126 (288)
T ss_pred             HHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3457789999999988999999999999999999999999 8999998874 4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC--CCCcchHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD--QSPRDDLEALCYTLVYF  166 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Dv~slg~~l~~l  166 (257)
                      +|+||+|+||+++.+   +.++++|||++..+......  ......++..|++||...+..  .+.++|+||+|+++++|
T Consensus       127 ~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el  201 (288)
T cd05583         127 IYRDIKLENILLDSE---GHVVLTDFGLSKEFLAEEEE--RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFEL  201 (288)
T ss_pred             eccCCCHHHeEECCC---CCEEEEECcccccccccccc--ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHH
Confidence            999999999999765   88999999988765433211  112345788999999987665  67899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFD  246 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~  246 (257)
                      ++|..||...........+....   .. .....+..++..+.+++.+||+.+|++|||+.++.+.|...        .-
T Consensus       202 ~tg~~p~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~--------~~  269 (288)
T cd05583         202 LTGASPFTVDGEQNSQSEISRRI---LK-SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP--------FF  269 (288)
T ss_pred             HhCCCCcccCcccchHHHHHHHH---Hc-cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc--------cc
Confidence            99999997533222222221111   11 11223356888999999999999999999998877765442        33


Q ss_pred             CCcccccccc
Q psy2769         247 LRYDWTLLER  256 (257)
Q Consensus       247 ~~~~~~~~~~  256 (257)
                      ...+|..+++
T Consensus       270 ~~~~~~~~~~  279 (288)
T cd05583         270 QGIDWDDLAA  279 (288)
T ss_pred             ccCCHHHHhh
Confidence            4466766654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.3e-35  Score=232.01  Aligned_cols=208  Identities=22%  Similarity=0.286  Sum_probs=167.9

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      .+..|..++....+|||++++++++..++..++++||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|++|
T Consensus        42 ~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H  120 (260)
T cd05611          42 NVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIH  120 (260)
T ss_pred             HHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            34556666666656999999999999999999999999 9999999974 456899999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGK  170 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~  170 (257)
                      +||+|+||+++.+   +.++|+|||++......       ....++..|++||.+.+..++.++||||+|+++|+|++|.
T Consensus       121 ~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~-------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~  190 (260)
T cd05611         121 RDIKPENLLIDQT---GHLKLTDFGLSRNGLEN-------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY  190 (260)
T ss_pred             CCCCHHHeEECCC---CcEEEeecccceecccc-------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCC
Confidence            9999999999765   88999999988654321       3446788999999998888899999999999999999999


Q ss_pred             CCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         171 LPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       171 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      .||....   .......+....... .......+|+.+.+++.+||+.+|++||++..+.+.+.
T Consensus       191 ~p~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         191 PPFHAET---PDAVFDNILSRRINW-PEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             CCCCCCC---HHHHHHHHHhcccCC-CCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            9998643   233333333222221 22223468999999999999999999998876655443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.2e-35  Score=237.45  Aligned_cols=221  Identities=20%  Similarity=0.280  Sum_probs=170.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ...++.+|++++.++. ||||+++++++..  .+.++++|||+ +++|.+++...   ...++...+..++.|++.||.|
T Consensus        42 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~  120 (287)
T cd06621          42 LQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSY  120 (287)
T ss_pred             HHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence            3457899999999997 9999999998864  34689999999 99999887642   4568899999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ||+.|++|+||+|+||+++.+   +.++|+|||++........     ....++..|+|||.+.+..++.++|+||+|++
T Consensus       121 lH~~~i~H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~-----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i  192 (287)
T cd06621         121 LHSRKIIHRDIKPSNILLTRK---GQVKLCDFGVSGELVNSLA-----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLT  192 (287)
T ss_pred             HHHCCcccCCCCHHHEEEecC---CeEEEeecccccccccccc-----ccccCCccccCHHHhcCCCCCchhhHHHHHHH
Confidence            999999999999999999765   7899999998765432211     23456788999999998889999999999999


Q ss_pred             HHHHHhCCCCCCCCCC--ccHHHHHHHHHHHHhhCCh--hhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHH
Q psy2769         163 LVYFLRGKLPWQSIKS--DNEETRMQRVTEMKLTMTP--EAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNL  236 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~  236 (257)
                      +|+|++|..||.....  ....+....+.....+...  ......+++.+.+++.+||..+|++|||+.++++  .+++.
T Consensus       193 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         193 LLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             HHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence            9999999999987532  1222222222211111000  0000235678999999999999999999999987  55444


Q ss_pred             HH
Q psy2769         237 LE  238 (257)
Q Consensus       237 ~~  238 (257)
                      .+
T Consensus       273 ~~  274 (287)
T cd06621         273 MK  274 (287)
T ss_pred             cc
Confidence            44

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=6.3e-35  Score=233.03  Aligned_cols=216  Identities=19%  Similarity=0.259  Sum_probs=173.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC--SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+.+|+.+++.+. |++++++++.+..+...++++|++ +++|.+++...  ...+++..+..++.|++.||++||+
T Consensus        42 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~  120 (267)
T cd06610          42 SVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS  120 (267)
T ss_pred             HHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4567889999999997 999999999999999999999999 99999999854  2468999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTL  163 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l  163 (257)
                      .|++|+||+|+||+++.+   +.++|+|||.+.......... .......++..|++||.+... ..+.++|+||||+++
T Consensus       121 ~~i~h~~l~p~ni~~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~  197 (267)
T cd06610         121 NGQIHRDIKAGNILLGED---GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITA  197 (267)
T ss_pred             CCeecCCCCHHhEEEcCC---CCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHH
Confidence            999999999999999865   789999999887655432221 111344688899999998877 678999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhh-CChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLT-MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|++|+.||......   +........... .........+++.+.+++.+||..||++||++.++++
T Consensus       198 ~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         198 IELATGAAPYSKYPPM---KVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HHHHhCCCCccccChh---hhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            9999999999875332   222222221111 1111112367889999999999999999999998875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=6.7e-35  Score=236.23  Aligned_cols=210  Identities=20%  Similarity=0.204  Sum_probs=166.8

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+|+.++.++. ||||+++++++...  ...|+++||++++|.+++......+++..+..++.|++.||.|||+.|++
T Consensus        50 ~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~  128 (293)
T cd07843          50 TSLREINILLKLQ-HPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWIL  128 (293)
T ss_pred             hHHHHHHHHHhcC-CCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            4678999999998 99999999998776  78999999997799999886555799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||.+.........   .....++..|+|||.+.+.. .+.++|+||+|+++++|++
T Consensus       129 H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~  202 (293)
T cd07843         129 HRDLKTSNLLLNNR---GILKICDFGLAREYGSPLKP---YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLT  202 (293)
T ss_pred             eccCCHHHEEECCC---CcEEEeecCceeeccCCccc---cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHh
Confidence            99999999999766   89999999988765443211   13345788999999987654 5889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhh--------------------------CChhhhhcC-CcHHHHHHHHHHhcCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLT--------------------------MTPEAICEG-TPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~-~~~~~~~li~~~l~~~p~  221 (257)
                      |..||........   +.++......                          .....+... +++.+.++|++||+.+|+
T Consensus       203 g~~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  279 (293)
T cd07843         203 KKPLFPGKSEIDQ---LNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA  279 (293)
T ss_pred             CCCCCCCCChHHH---HHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence            9999987543222   2222111000                          000111112 488899999999999999


Q ss_pred             CCCChHHHHH
Q psy2769         222 EEPNYGKLRD  231 (257)
Q Consensus       222 ~Rp~~~~~~~  231 (257)
                      +||++++++.
T Consensus       280 ~R~t~~ell~  289 (293)
T cd07843         280 KRISAEDALK  289 (293)
T ss_pred             ccCCHHHHhc
Confidence            9999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0603|consensus

Probab=100.00  E-value=1e-35  Score=248.18  Aligned_cols=202  Identities=19%  Similarity=0.195  Sum_probs=169.4

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ....+|+.++....+||||+++.+.+.+..+.|+|||.+ |+-+.+.+.. ...+. .++..|+.+|+.++.+||++|++
T Consensus       360 ~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~-~~~~~-~e~~~w~~~lv~Av~~LH~~gvv  437 (612)
T KOG0603|consen  360 DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRS-KPEFC-SEASQWAAELVSAVDYLHEQGVV  437 (612)
T ss_pred             cccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHh-cchhH-HHHHHHHHHHHHHHHHHHhcCee
Confidence            346788999999999999999999999999999999999 8887777773 33343 78888999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhC
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      |||+||+||++.  ++.+.++|+|||.+......      .....-|..|.|||++...+++..+|+||||+++|+|++|
T Consensus       438 hRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G  509 (612)
T KOG0603|consen  438 HRDLKPGNILLD--GSAGHLRLTYFGFWSELERS------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTG  509 (612)
T ss_pred             ecCCChhheeec--CCCCcEEEEEechhhhCchh------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhC
Confidence            999999999995  23388999999999766443      1344567899999999999999999999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.||......  .+...++...+.+       ..+|+..++|+.+||+.||.+||+++++..
T Consensus       510 ~tp~~~~P~~--~ei~~~i~~~~~s-------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  510 RTLFAAHPAG--IEIHTRIQMPKFS-------ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             CCccccCCch--HHHHHhhcCCccc-------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            9999986544  3333333332222       679999999999999999999999999864

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-34  Score=236.21  Aligned_cols=222  Identities=15%  Similarity=0.112  Sum_probs=168.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEeccCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELLGPSLEDLFQYC----SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..+.+.+|+.++.++. ||||+++++++...  ...++|+|++++++.+.+...    ...+++..+..++.|++.||.|
T Consensus        45 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~  123 (316)
T cd07842          45 ISQSACREIALLRELK-HENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHY  123 (316)
T ss_pred             ccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHH
Confidence            3456788999999998 99999999999887  789999999987888887643    2368899999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccC-CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRE-NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALC  160 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg  160 (257)
                      ||+.|++|+||+|+||+++.++ .++.++|+|||++.................++..|+|||.+.+. .++.++|+||||
T Consensus       124 lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  203 (316)
T cd07842         124 LHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIG  203 (316)
T ss_pred             HHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHH
Confidence            9999999999999999998711 13899999999987654432211122334578889999988764 468899999999


Q ss_pred             HHHHHHHhCCCCCCCCCCcc------HHHHHHHHHHHHh---------------------h-----CC----hhhhh--c
Q psy2769         161 YTLVYFLRGKLPWQSIKSDN------EETRMQRVTEMKL---------------------T-----MT----PEAIC--E  202 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~---------------------~-----~~----~~~~~--~  202 (257)
                      +++++|++|..||.......      ....+..+.....                     .     ..    .....  .
T Consensus       204 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd07842         204 CIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHK  283 (316)
T ss_pred             HHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhcc
Confidence            99999999999998654332      0111111111000                     0     00    00000  1


Q ss_pred             CCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         203 GTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       203 ~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ..+..+.+++.+||+.||++||++.++++
T Consensus       284 ~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         284 KPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            56778999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=2.3e-34  Score=233.24  Aligned_cols=214  Identities=14%  Similarity=0.149  Sum_probs=166.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCc-----cEEEEeccCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDY-----NILVMELLGPSLEDLFQYC----SKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~-----~~~v~e~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ...+.+|+.++.++.+||||+++++++.....     .+++|||+.++|.+++...    ...+++..+..++.|++.||
T Consensus        44 ~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L  123 (295)
T cd07837          44 PPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGV  123 (295)
T ss_pred             chHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHH
Confidence            34688899999999878999999999887655     7999999966899888753    23589999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEAL  159 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~sl  159 (257)
                      .|||+.|++|+||+|+||+++.  +++.++|+|||.+..+.......   ....+++.|+|||.+.+. .++.++|+|||
T Consensus       124 ~~LH~~~i~H~dl~~~nil~~~--~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~sl  198 (295)
T cd07837         124 AHCHKHGVMHRDLKPQNLLVDK--QKGLLKIADLGLGRAFSIPVKSY---THEIVTLWYRAPEVLLGSTHYSTPVDIWSV  198 (295)
T ss_pred             HHHHHCCeeecCCChHHEEEec--CCCeEEEeecccceecCCCcccc---CCcccccCCCChHHhhCCCCCCchHHHHHH
Confidence            9999999999999999999986  13789999999987653321111   223567889999988654 46889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHh-----------------------hCChhhhhcCCcHHHHHHHHHHh
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKL-----------------------TMTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      |+++|+|++|..||.......   ....+.....                       +.......+.+++.+.++|.+||
T Consensus       199 G~~l~~l~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  275 (295)
T cd07837         199 GCIFAEMSRKQPLFPGDSELQ---QLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKML  275 (295)
T ss_pred             HHHHHHHHcCCCCCCCCCHHH---HHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHc
Confidence            999999999999998743222   1111111100                       00111122457889999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++||++++++.
T Consensus       276 ~~~P~~R~~~~eil~  290 (295)
T cd07837         276 RYDPAKRISAKAALT  290 (295)
T ss_pred             cCChhhcCCHHHHhc
Confidence            999999999998864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=2.7e-34  Score=232.84  Aligned_cols=207  Identities=25%  Similarity=0.423  Sum_probs=156.6

Q ss_pred             HhcCCCCCcEEEeeeeeCC----ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q psy2769          22 KLHGAPGVPHVMGYGTSGD----YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN   97 (257)
Q Consensus        22 ~l~~~~~i~~~~~~~~~~~----~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~n   97 (257)
                      .+. |++++++++++....    ..+++++++..++.+.+.. ....++..+..++.|++.||.|||+.+++||||||+|
T Consensus        79 ~~~-h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~N  156 (294)
T PHA02882         79 NID-HLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKR-IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPEN  156 (294)
T ss_pred             cCC-CCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHh-hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence            344 899999999766543    3478888887788887774 3446788899999999999999999999999999999


Q ss_pred             eEeeccCCCCeEEEEeCCcceecCCCCCCC----CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCC
Q psy2769          98 FLMGVRENFNTVYLVDFGLAVDFCPNCPPR----IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW  173 (257)
Q Consensus        98 ili~~~~~~~~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~  173 (257)
                      |+++.+   +.++|+|||++..+.......    .......||+.|+|||.+.+..++.++||||+||++++|++|..||
T Consensus       157 ill~~~---~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~  233 (294)
T PHA02882        157 IMVDGN---NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPW  233 (294)
T ss_pred             EEEcCC---CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence            999765   789999999987664322111    1112346999999999999999999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         174 QSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      ................-.............+|+.+.++++.|+..+|++||+++++.+.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        234 KGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             CccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            886433221111110000000011111256789999999999999999999999999876

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.1e-34  Score=232.01  Aligned_cols=211  Identities=20%  Similarity=0.284  Sum_probs=171.6

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh-
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHR-   85 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~-   85 (257)
                      .++.+|+.++.+..+||||+++++++..++..+++|||+ +++|.+++...   ...++...+..++.|++.||.+||+ 
T Consensus        53 ~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  132 (269)
T cd08528          53 GDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE  132 (269)
T ss_pred             HHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC
Confidence            456778888887556999999999999999999999999 89999988542   4568999999999999999999996 


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||+|+||+++.+   +.++|+|||.+.......    ......++..|++||...+..++.++|+||||+++|+
T Consensus       133 ~~i~H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~  205 (269)
T cd08528         133 KRIVHRDLTPNNIMLGED---DKVTITDFGLAKQKQPES----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQ  205 (269)
T ss_pred             CceeecCCCHHHEEECCC---CcEEEecccceeeccccc----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHH
Confidence            789999999999999766   889999999987654332    1244568889999999998888999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |++|..||....   .......+......   +.....+++.+.+++.+||+.||++||++.++.+.++
T Consensus       206 l~~g~~p~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         206 MCTLQPPFYSTN---MLSLATKIVEAVYE---PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHhCCCcccccC---HHHHHHHHhhccCC---cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            999999997632   22222222222111   1111357889999999999999999999999988775

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=9.7e-35  Score=231.96  Aligned_cols=210  Identities=20%  Similarity=0.253  Sum_probs=166.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.++.++. ||||+++++++...  ..++++|||+ +++|.+++.. ...+++..+..++.|++.||.+||+.
T Consensus        48 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~  125 (265)
T cd06652          48 VNALECEIQLLKNLL-HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILEGVSYLHSN  125 (265)
T ss_pred             HHHHHHHHHHHHhcC-CCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            346788999999998 99999999988763  4678999999 8999999874 45688999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+.................++..|+|||.+.+...+.++|+||||+++|+|
T Consensus       126 ~i~H~dl~p~nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el  202 (265)
T cd06652         126 MIVHRDIKGANILRDSV---GNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEM  202 (265)
T ss_pred             CEecCCCCHHHEEecCC---CCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHH
Confidence            99999999999999765   889999999887543321111111334688899999999888889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.....   ...+...   ......+..+...+..+.+++.+|+ .+|++||++++++.
T Consensus       203 ~~g~~p~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~  260 (265)
T cd06652         203 LTEKPPWAEFEA---MAAIFKI---ATQPTNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR  260 (265)
T ss_pred             hhCCCCCCccch---HHHHHHH---hcCCCCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence            999999986421   2222221   1111122233567788999999999 59999999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=2.3e-34  Score=235.61  Aligned_cols=206  Identities=20%  Similarity=0.247  Sum_probs=168.5

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      ..+.+|+.++.++. |||++++++++..+...++||||+.+++.+.+......+++..+..++.|++.||.+||+.|++|
T Consensus        70 ~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H  148 (317)
T cd06635          70 QDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH  148 (317)
T ss_pred             HHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            46888999999998 99999999999999999999999977888888755667999999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHHHH
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +||+|+||+++.+   +.++|+|||++......       ....++..|+|||.+.   +...+.++|+||+|+++|+|+
T Consensus       149 ~dL~p~Nil~~~~---~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~  218 (317)
T cd06635         149 RDIKAGNILLTEP---GQVKLADFGSASIASPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA  218 (317)
T ss_pred             CCCCcccEEECCC---CCEEEecCCCccccCCc-------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHH
Confidence            9999999999765   88999999987643221       3446788999999974   345788999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF  233 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l  233 (257)
                      +|..||....   ....+..+......   ......+++.+.+++.+||+.+|.+||++.++++..
T Consensus       219 ~g~~p~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         219 ERKPPLFNMN---AMSALYHIAQNESP---TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             hCCCCCCCcc---HHHHHHHHHhccCC---CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            9999998642   22222222222111   111245788899999999999999999999998743

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=233.33  Aligned_cols=214  Identities=16%  Similarity=0.184  Sum_probs=168.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+.+.+|+.+++++. ||||+++++++..++..++++||+++++.+.+......+++..+..++.|++.||.+||+.|+
T Consensus        43 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  121 (288)
T cd07833          43 VKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNI  121 (288)
T ss_pred             chhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3467899999999999 999999999999999999999999555555555445679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+|++|+||+++.+   +.++|+|||.+.........  ......++..|+|||.+.+. .++.++|+||+|+++|+|+
T Consensus       122 ~H~dl~~~ni~~~~~---~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~  196 (288)
T cd07833         122 IHRDIKPENILVSES---GVLKLCDFGFARALRARPAS--PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELL  196 (288)
T ss_pred             ecCCCCHHHeEECCC---CCEEEEeeecccccCCCccc--cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHH
Confidence            999999999999865   88999999998765544321  11345678899999999888 7889999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCC---------------------------hhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMT---------------------------PEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      +|..||......+   .+..+........                           .......+|..+.++|++||..+|
T Consensus       197 ~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  273 (288)
T cd07833         197 DGEPLFPGDSDID---QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDP  273 (288)
T ss_pred             hCCCCCCCCCHHH---HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCc
Confidence            9999998643222   1111111100000                           001112358889999999999999


Q ss_pred             CCCCChHHHHH
Q psy2769         221 SEEPNYGKLRD  231 (257)
Q Consensus       221 ~~Rp~~~~~~~  231 (257)
                      ++||++++++.
T Consensus       274 ~~Rps~~~il~  284 (288)
T cd07833         274 KERLTCDELLQ  284 (288)
T ss_pred             hhcccHHHHhc
Confidence            99999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=1.2e-34  Score=233.65  Aligned_cols=215  Identities=16%  Similarity=0.199  Sum_probs=167.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS--KRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++.+. ||||+++++++...+..++||||+.++|.+++....  ..+++..+..++.|++.||.+||+.|
T Consensus        42 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (284)
T cd07836          42 PSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR  120 (284)
T ss_pred             hHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456788999999997 999999999999999999999999779998887543  46899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||+|+||+++.+   +.++++|||.+.........   .....++..|++||.+.+. .++.++|+||+|+++|++
T Consensus       121 i~h~dl~p~ni~~~~~---~~~~l~d~g~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l  194 (284)
T cd07836         121 VLHRDLKPQNLLINKR---GELKLADFGLARAFGIPVNT---FSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEM  194 (284)
T ss_pred             eeeCCCCHHHEEECCC---CcEEEeecchhhhhcCCccc---cccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence            9999999999999765   88999999988654332111   1234567889999998664 468899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHh-----------------h----CChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKL-----------------T----MTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      ++|..||...........+........                 +    .......+.+++.+.+++.+|++.||++||+
T Consensus       195 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~  274 (284)
T cd07836         195 ITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS  274 (284)
T ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC
Confidence            999999987543322221111100000                 0    0001122356788999999999999999999


Q ss_pred             hHHHHH
Q psy2769         226 YGKLRD  231 (257)
Q Consensus       226 ~~~~~~  231 (257)
                      +.++++
T Consensus       275 ~~~~l~  280 (284)
T cd07836         275 AHDALQ  280 (284)
T ss_pred             HHHHhc
Confidence            998874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=5.1e-35  Score=235.86  Aligned_cols=211  Identities=16%  Similarity=0.175  Sum_probs=166.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|+.++.++. ||||+++++++..+...+++|||+.++|.+++... ...+++..+..++.|++.||+|||+.|++
T Consensus        44 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~  122 (284)
T cd07860          44 STAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVL  122 (284)
T ss_pred             hHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            46889999999998 99999999999999999999999977898888753 45689999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++++|||.+.........   .....++..|+|||.+.+.. .+.++|+||||+++|+|++
T Consensus       123 H~~l~p~nill~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t  196 (284)
T cd07860         123 HRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRT---YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT  196 (284)
T ss_pred             cCCCCHHHEEECCC---CCEEEeeccchhhcccCccc---cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHH
Confidence            99999999999876   88999999988654332111   12334678899999887654 5788999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHH------------------hh------CChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMK------------------LT------MTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~------------------~~------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |..||......+.   ...+....                  ..      .........+++.+.++|.+||+.||++||
T Consensus       197 g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  273 (284)
T cd07860         197 RRALFPGDSEIDQ---LFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI  273 (284)
T ss_pred             CCCCCCCCCHHHH---HHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCC
Confidence            9999986432221   11111100                  00      001112245788899999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      ++++++.
T Consensus       274 t~~~~l~  280 (284)
T cd07860         274 SAKAALA  280 (284)
T ss_pred             CHHHHhc
Confidence            9998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=7e-35  Score=235.88  Aligned_cols=211  Identities=21%  Similarity=0.271  Sum_probs=166.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-----CccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-----DYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ...+.+|+.++.++.+|||++++++++...     ...++|+||+ +++|.+++...   ...+++..+..++.|++.||
T Consensus        62 ~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al  141 (291)
T cd06639          62 DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGL  141 (291)
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHH
Confidence            356788999999996699999999988643     3689999999 99999988642   45789999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-----CCCcch
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-----QSPRDD  155 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-----~~~~~D  155 (257)
                      .+||+.|++|+||+|+||+++.+   +.++|+|||.+.........   .....++..|+|||.+....     .+.++|
T Consensus       142 ~~lH~~~ivH~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D  215 (291)
T cd06639         142 QHLHNNRIIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLR---RNTSVGTPFWMAPEVIACEQQYDYSYDARCD  215 (291)
T ss_pred             HHHHhCCeeccCCCHHHEEEcCC---CCEEEeecccchhccccccc---ccCccCCccccChhhhcCCCCcccccCCccc
Confidence            99999999999999999999766   78999999998765432211   13346788999999986442     578999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         156 LEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       156 v~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +||+|+++|+|++|..||......   ..+..+.....  ........++..+.++|.+||+.+|++||++.+++.
T Consensus       216 i~slGvi~~el~~g~~p~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         216 VWSLGITAIELGDGDPPLFDMHPV---KTLFKIPRNPP--PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCcHH---HHHHHHhcCCC--CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            999999999999999999875322   22222221111  111112456778999999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.8e-34  Score=235.38  Aligned_cols=206  Identities=21%  Similarity=0.247  Sum_probs=167.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+++.+|+.+++.+. |||++++.+++......++|+||+.+++.+.+......+++..+..++.|++.|+.+||+.|++
T Consensus        59 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~  137 (308)
T cd06634          59 WQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI  137 (308)
T ss_pred             HHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence            346778999999997 9999999999999889999999997788888775566789999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |+||+|+||+++.+   +.++++|||.+......       ....++..|+|||.+.   ....+.++||||||+++|+|
T Consensus       138 H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el  207 (308)
T cd06634         138 HRDVKAGNILLSEP---GLVKLGDFGSASIMAPA-------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL  207 (308)
T ss_pred             cCCCCHHhEEECCC---CcEEECCcccceeecCc-------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHH
Confidence            99999999999765   88999999988654322       3346788999999985   34567899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      ++|..||.....   ......+.....   +......++..+.++|++||..+|++||+++++++.
T Consensus       208 ~~g~~p~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         208 AERKPPLFNMNA---MSALYHIAQNES---PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HcCCCCCccccH---HHHHHHHhhcCC---CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            999999876432   222222222111   111124688899999999999999999999988753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-35  Score=236.07  Aligned_cols=212  Identities=17%  Similarity=0.197  Sum_probs=172.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ...+.+|+.+++++. ||+|+++++++..+...++++||+++++.+.+......+++..+..++.|++.||.+||+.|++
T Consensus        42 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~  120 (283)
T cd05118          42 PKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL  120 (283)
T ss_pred             HHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            356888999999998 9999999999999999999999997799998886556899999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||.+.........   .....++..|+|||.+.+. ..+.++|+||+|+++|+|++
T Consensus       121 H~dl~p~nili~~~---~~~~l~df~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~t  194 (283)
T cd05118         121 HRDLKPENLLINTE---GVLKLADFGLARSFGSPVRP---YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLS  194 (283)
T ss_pred             ecCcCHHHEEECCC---CcEEEeeeeeeEecCCCccc---ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHh
Confidence            99999999999865   88999999998776544211   1334578899999999876 67899999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHH-------------------------hhCChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMK-------------------------LTMTPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      |..||......   +.+..+....                         .....+...+.++..+.++|.+||++||.+|
T Consensus       195 g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R  271 (283)
T cd05118         195 RRPLFPGKSEI---DQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKR  271 (283)
T ss_pred             CCCCCCCCCHH---HHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccC
Confidence            99999764322   2222211110                         0011122334678899999999999999999


Q ss_pred             CChHHHHH
Q psy2769         224 PNYGKLRD  231 (257)
Q Consensus       224 p~~~~~~~  231 (257)
                      |++.+++.
T Consensus       272 p~~~~ll~  279 (283)
T cd05118         272 ITAEQALA  279 (283)
T ss_pred             cCHHHHhh
Confidence            99999874

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=9.3e-35  Score=235.91  Aligned_cols=219  Identities=16%  Similarity=0.146  Sum_probs=171.3

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      ..+..|+.++.++. ||||+++++++......++||||++++|.+++......+++..+..++.|++.||.+||+.|++|
T Consensus        47 ~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H  125 (298)
T cd07841          47 FTALREIKLLQELK-HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILH  125 (298)
T ss_pred             HHHHHHHHHHhhcC-CCCChhhhheeecCCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence            35678999999998 99999999999998899999999999999999853337999999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHhC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      +||+|+||+++.+   +.++|+|||++.........   .....++..|+|||.+.+ ..++.++|+||+|+++++|++|
T Consensus       126 ~dl~p~nill~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g  199 (298)
T cd07841         126 RDLKPNNLLIASD---GVLKLADFGLARSFGSPNRK---MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLR  199 (298)
T ss_pred             cCCChhhEEEcCC---CCEEEccceeeeeccCCCcc---ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcC
Confidence            9999999999866   88999999998766443211   133456788999999865 3568899999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHh-----------------------hCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKL-----------------------TMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      .+||.......   .+.++.....                       ...........+..+.++|.+||+.+|++||++
T Consensus       200 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~  276 (298)
T cd07841         200 VPFLPGDSDID---QLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITA  276 (298)
T ss_pred             CccccCCccHH---HHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCH
Confidence            88887643322   2222211100                       000111224567889999999999999999999


Q ss_pred             HHHHHHHHHHHHhcc
Q psy2769         227 GKLRDSFRNLLENKE  241 (257)
Q Consensus       227 ~~~~~~l~~~~~~~~  241 (257)
                      .++++  ..++.+..
T Consensus       277 ~e~l~--~~~~~~~~  289 (298)
T cd07841         277 RQALE--HPYFSNDP  289 (298)
T ss_pred             HHHhh--CccccCCC
Confidence            99987  34444433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=7.5e-35  Score=238.19  Aligned_cols=217  Identities=15%  Similarity=0.198  Sum_probs=168.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.+++.++ ||||+++++++...+..+++|||+ +++|.+++... ...+++..+..++.|++.||.|||++
T Consensus        42 ~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~  120 (314)
T cd08216          42 DLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK  120 (314)
T ss_pred             HHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4567999999999998 999999999999999999999999 89999999854 45688999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC----CCCCccCCCCcccccChhHhcCC--CCCCcchHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP----PRIRTRGLTGTARYASVNAHQWL--DQSPRDDLEALC  160 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slg  160 (257)
                      |++|+||+|+||+++.+   +.++++||+.+........    .........++..|+|||.+.+.  .++.++|+||+|
T Consensus       121 ~ivH~dlk~~Nili~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G  197 (314)
T cd08216         121 GFIHRSVKASHILLSGD---GKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVG  197 (314)
T ss_pred             CeecCCCCcceEEEecC---CceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHH
Confidence            99999999999999866   8899999998765433211    01111234567789999998763  578899999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHH--------hh--------------------CChhhhhcCCcHHHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK--------LT--------------------MTPEAICEGTPPEFAEFL  212 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~--------------------~~~~~~~~~~~~~~~~li  212 (257)
                      +++|+|++|..||.......  .....+....        .+                    .........++..+.+++
T Consensus       198 ~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  275 (314)
T cd08216         198 ITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFV  275 (314)
T ss_pred             HHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHH
Confidence            99999999999998753221  1111111000        00                    000011123456789999


Q ss_pred             HHHhcCCCCCCCChHHHHH
Q psy2769         213 RYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       213 ~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ..||..||++||+++++++
T Consensus       276 ~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         276 ELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             HHHhhcCCCcCcCHHHHhc
Confidence            9999999999999999977

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=8e-35  Score=235.63  Aligned_cols=208  Identities=22%  Similarity=0.306  Sum_probs=169.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. |||++++++.+...+..+++|||+ +++|.+++.  ...+++..+..++.|++.|++++|+.|+
T Consensus        61 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~gi  137 (292)
T cd06657          61 RELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLKALSVLHAQGV  137 (292)
T ss_pred             HHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            446888999999998 999999999999999999999999 899998876  4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+........   ......++..|++||.+.+..++.++|+||+|+++|+|++
T Consensus       138 vH~dl~p~Nilv~~~---~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~t  211 (292)
T cd06657         138 IHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD  211 (292)
T ss_pred             ecCCCCHHHEEECCC---CCEEEcccccceecccccc---cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999866   7899999998765433211   1133467889999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.....   ......+... .+. .......+++.+.+++.+||..+|.+||++.++++
T Consensus       212 g~~p~~~~~~---~~~~~~~~~~-~~~-~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         212 GEPPYFNEPP---LKAMKMIRDN-LPP-KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             CCCCCCCCCH---HHHHHHHHhh-CCc-ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            9999986322   2222222211 111 11112467889999999999999999999999877

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=3.3e-34  Score=231.99  Aligned_cols=212  Identities=15%  Similarity=0.157  Sum_probs=163.7

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      ..+.+|+.++..+. |+||+++++++..+...++|+||+++++.+.+......++...+..++.|++.||.+||+.|++|
T Consensus        48 ~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H  126 (291)
T cd07870          48 FTAIREASLLKGLK-HANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILH  126 (291)
T ss_pred             HHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            35788999999998 99999999999999899999999988888877654556888899999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHhC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      +||+|+||+++.+   +.++|+|||++.........   .....++..|+|||.+.+. .++.++|+||||+++|+|++|
T Consensus       127 ~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g  200 (291)
T cd07870         127 RDLKPQNLLISYL---GELKLADFGLARAKSIPSQT---YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQG  200 (291)
T ss_pred             CCCChHHEEEcCC---CcEEEeccccccccCCCCCC---CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhC
Confidence            9999999999766   88999999988653322111   1334568899999998764 468899999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHh-------------h------------CChhhhh--cCCcHHHHHHHHHHhcCCCCC
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKL-------------T------------MTPEAIC--EGTPPEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~-------------~------------~~~~~~~--~~~~~~~~~li~~~l~~~p~~  222 (257)
                      ..||......  .+.+..+.....             +            .......  -..++.+.+++.+|+..||++
T Consensus       201 ~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~  278 (291)
T cd07870         201 QPAFPGVSDV--FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKD  278 (291)
T ss_pred             CCCCCCchhH--HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCccc
Confidence            9999865331  122221111000             0            0000000  123567999999999999999


Q ss_pred             CCChHHHHH
Q psy2769         223 EPNYGKLRD  231 (257)
Q Consensus       223 Rp~~~~~~~  231 (257)
                      |||+++++.
T Consensus       279 R~t~~~~l~  287 (291)
T cd07870         279 RISAQDALL  287 (291)
T ss_pred             CcCHHHHhc
Confidence            999998764

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.9e-34  Score=229.88  Aligned_cols=208  Identities=22%  Similarity=0.284  Sum_probs=171.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+++.+|+.+++++. ||||+++++++..  ....++++||+ +++|.+++...   ...+++..+..++.|++.||.++
T Consensus        43 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~l  121 (265)
T cd08217          43 KQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYEC  121 (265)
T ss_pred             HHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            456888999999998 9999999997754  45689999999 99999999754   45789999999999999999999


Q ss_pred             H-----hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHH
Q psy2769          84 H-----RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEA  158 (257)
Q Consensus        84 h-----~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~s  158 (257)
                      |     +.+++|+||+|+||+++.+   +.++++|||.+.........   .....+++.|+|||.+.+...+.++|+||
T Consensus       122 H~~~~~~~~i~h~dl~p~nili~~~---~~~kl~d~g~~~~~~~~~~~---~~~~~~~~~~~~pE~~~~~~~~~~~Dv~s  195 (265)
T cd08217         122 HNRSDPGNTVLHRDLKPANIFLDAN---NNVKLGDFGLAKILGHDSSF---AKTYVGTPYYMSPEQLNHMSYDEKSDIWS  195 (265)
T ss_pred             hcCccccCcceecCCCHHHEEEecC---CCEEEecccccccccCCccc---ccccccCCCccChhhhcCCCCCchhHHHH
Confidence            9     8999999999999999866   89999999998776443211   13456889999999999888899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         159 LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       159 lg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||+++++|++|..||....   .......+..    ...+.....++..+.+++.+|+..+|++||++.++++
T Consensus       196 lG~il~~l~~g~~p~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         196 LGCLIYELCALSPPFTARN---QLQLASKIKE----GKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HHHHHHHHHHCCCcccCcC---HHHHHHHHhc----CCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            9999999999999998743   2222222222    2223344678899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG1163|consensus

Probab=100.00  E-value=9.5e-35  Score=216.43  Aligned_cols=256  Identities=51%  Similarity=0.950  Sum_probs=235.0

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ||+++.+.....+..|..++..|++...|+.+.-++....+-.+||+..|+||.+++..+++.++..++.-++.|++.-+
T Consensus        45 iK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~Ri  124 (341)
T KOG1163|consen   45 IKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRI  124 (341)
T ss_pred             EEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHH
Confidence            68899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC----CCCCccCCCCcccccChhHhcCCCCCCcchH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDL  156 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv  156 (257)
                      .|+|.++++||||||+|++..-+.....+.++|||++..+-....    +........||..|.+-....+...+.+.|+
T Consensus       125 EyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDm  204 (341)
T KOG1163|consen  125 EYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDM  204 (341)
T ss_pred             HHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhh
Confidence            999999999999999999998877778899999999987654331    1111244579999999888888888999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      -|+|+++.++-.|..||.++...+....+++|.+.+.+.+.+..+.++|.+|.-.+..|....-++-|++.-+...++-+
T Consensus       205 eSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL  284 (341)
T KOG1163|consen  205 ESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL  284 (341)
T ss_pred             hhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccccCCCCCccccccccC
Q psy2769         237 LENKERCEFDLRYDWTLLERK  257 (257)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~  257 (257)
                      +.+.+ ...|..+||+-|++|
T Consensus       285 fr~ln-~~~d~iyDW~~lkqk  304 (341)
T KOG1163|consen  285 FRTLN-HQYDYIYDWTMLKQK  304 (341)
T ss_pred             Hhhcc-ccCCeEeeHHHHHHH
Confidence            99888 889999999998875

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=3.8e-35  Score=233.39  Aligned_cols=208  Identities=23%  Similarity=0.259  Sum_probs=172.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.++. ||||+++++.+..+...++++||+ +++|.+.+.. ...+++..+..++.|++.||.+||+.|
T Consensus        43 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (258)
T cd05578          43 SVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQ-KVKFSEEQVKFWICEIVLALEYLHSKG  120 (258)
T ss_pred             HHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467889999999997 999999999999999999999999 9999999885 357999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.......    ......++..|+|||.+.+...+.++|+||+|+++|+|+
T Consensus       121 i~h~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  193 (258)
T cd05578         121 IIHRDIKPDNILLDEQ---GHVHITDFNIATKVTPDT----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECL  193 (258)
T ss_pred             eeccCCCHHHeEEcCC---CCEEEeecccccccCCCc----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHH
Confidence            9999999999999866   889999999987654432    113456788999999999888899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh--HHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY--GKLR  230 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~--~~~~  230 (257)
                      +|..||.................     .....+..+|..+.++|.+||..||.+||++  .+++
T Consensus       194 ~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         194 RGKRPYRGHSRTIRDQIRAKQET-----ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             hCCCCCCCCCccHHHHHHHHhcc-----ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            99999997654322222221111     2233346788999999999999999999999  5443

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=2e-34  Score=228.83  Aligned_cols=211  Identities=23%  Similarity=0.325  Sum_probs=175.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.+++++. ||+|+++++.+...  ...++++|++ +++|.+++... ..+++..+..++.|++.||.+||+.
T Consensus        43 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~  120 (260)
T cd06606          43 LEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKF-GKLPEPVIRKYTRQILEGLAYLHSN  120 (260)
T ss_pred             HHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            567899999999999 99999999999887  7899999999 99999999853 4899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+|++|+||+++.+   +.++|+|||.+.......... ......++..|++||...+...+.++|+||||+++++|
T Consensus       121 ~~~h~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l  196 (260)
T cd06606         121 GIVHRDIKGANILVDSD---GVVKLADFGCAKRLGDIETGE-GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEM  196 (260)
T ss_pred             CccccCCCHHHEEEcCC---CCEEEcccccEEecccccccc-cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence            99999999999999875   899999999988765543210 11445688899999999988899999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....  +.......+..   ....+..+..++..+.+++.+|+..+|++||++.+++.
T Consensus       197 ~~g~~p~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         197 ATGKPPWSELG--NPMAALYKIGS---SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HhCCCCCCCCC--chHHHHHhccc---cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            99999998754  22222222211   12223344667899999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.6e-34  Score=235.82  Aligned_cols=218  Identities=18%  Similarity=0.171  Sum_probs=169.4

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+|+.++.+++ ||||+++++++...  +..++||||++++|.+++......+++..+..++.|++.||.+||+.|++
T Consensus        52 ~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~  130 (309)
T cd07845          52 SSLREITLLLNLR-HPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFII  130 (309)
T ss_pred             hhhHHHHHHHhCC-CCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            4678999999998 99999999998754  46899999998799999886567799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||.+..........   ....++..|+|||.+.+ ..++.++|+||+|+++|+|++
T Consensus       131 H~dl~p~nil~~~~---~~~kL~dfg~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~  204 (309)
T cd07845         131 HRDLKVSNLLLTDK---GCLKIADFGLARTYGLPAKPM---TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLA  204 (309)
T ss_pred             cCCCCHHHEEECCC---CCEEECccceeeecCCccCCC---CcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHh
Confidence            99999999999765   889999999987664432111   23345778999999876 456889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhh-------------------C------ChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLT-------------------M------TPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------~------~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      |..||......   ..+..+......                   .      .........++.+.++|.+||..||++|
T Consensus       205 g~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R  281 (309)
T cd07845         205 HKPLLPGKSEI---EQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKR  281 (309)
T ss_pred             CCCCCCCCCHH---HHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhC
Confidence            99999874332   222222221000                   0      0001112358889999999999999999


Q ss_pred             CChHHHHHHHHHHHHhcc
Q psy2769         224 PNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       224 p~~~~~~~~l~~~~~~~~  241 (257)
                      |++++++.  ..++...+
T Consensus       282 ~t~~~il~--h~~f~~~~  297 (309)
T cd07845         282 ATAEEALE--SSYFKEKP  297 (309)
T ss_pred             cCHHHHhc--ChhhccCC
Confidence            99999885  34444433

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=2.3e-34  Score=231.53  Aligned_cols=205  Identities=24%  Similarity=0.330  Sum_probs=161.9

Q ss_pred             cHHHHHHHHHh--cCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          13 LFWERNFYEKL--HGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        13 ~~~E~~~~~~l--~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+|..++..+  .+||+|+.+++++...+..++||||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|++
T Consensus        41 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~iv  119 (279)
T cd05633          41 ALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVV  119 (279)
T ss_pred             HHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcC
Confidence            44555444444  25899999999999888999999999 9999988874 55799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||||+||+++.+   +.++++|||++.......     .....++..|+|||.+.+ ..++.++|+||+|+++++|++
T Consensus       120 H~dikp~Nil~~~~---~~~~l~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~  191 (279)
T cd05633         120 YRDLKPANILLDEH---GHVRISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLR  191 (279)
T ss_pred             CCCCCHHHEEECCC---CCEEEccCCcceeccccC-----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHh
Confidence            99999999999766   889999999986543321     133468999999999864 557889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      |..||.......... ...   .... .....+..+++.+.++|.+||..||++||     +++++++
T Consensus       192 g~~pf~~~~~~~~~~-~~~---~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         192 GHSPFRQHKTKDKHE-IDR---MTLT-VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             CCCCcCCCCCcCHHH-HHH---Hhhc-CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            999998654433221 111   1111 12233467889999999999999999999     4666654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.4e-34  Score=232.02  Aligned_cols=215  Identities=15%  Similarity=0.248  Sum_probs=169.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEecc-CCCHHHHHHHh-----cCCCCHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELL-GPSLEDLFQYC-----SKRFSLKTVLMLADQMI   77 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~~~~i~   77 (257)
                      .+.+.+|+.++.++. ||||+++++++....      ..+++++|+ +++|.+++...     ...++...+..++.|++
T Consensus        45 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~  123 (273)
T cd05074          45 IEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIA  123 (273)
T ss_pred             HHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHH
Confidence            346788999999998 999999999886532      247889999 89998877532     12578899999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||+|||+.|++|+||+|+||+++.+   +.++++|||.+............ ....+++.|++||.+.+...+.++|||
T Consensus       124 ~~l~~lH~~~i~H~dikp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~sDi~  199 (273)
T cd05074         124 SGMEYLSSKNFIHRDLAARNCMLNEN---MTVCVADFGLSKKIYSGDYYRQG-CASKLPVKWLALESLADNVYTTHSDVW  199 (273)
T ss_pred             HHHHHHHhCCEeecccchhhEEEcCC---CCEEECcccccccccCCcceecC-CCccCchhhcCHhHHhcCccchhhhhH
Confidence            99999999999999999999999765   88999999998765433211111 233456789999999988889999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       158 slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |||+++|+|++ |..||.....   ......+...    ........++..+.+++.+||+.+|++||++.+++..|+++
T Consensus       200 slG~il~el~~~g~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         200 AFGVTMWEIMTRGQTPYAGVEN---SEIYNYLIKG----NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHhhCCCCCCCCCCH---HHHHHHHHcC----CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999999998 8999986432   2222222221    11122256788999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.9e-34  Score=229.97  Aligned_cols=212  Identities=24%  Similarity=0.330  Sum_probs=170.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++++. |++|+++++.+...+..++++||+ +++|.+++.. ...+++..+..++.+++.||.+||+.|
T Consensus        42 ~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~  119 (264)
T cd06626          42 TIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHG  119 (264)
T ss_pred             HHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEEecCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence            4567899999999998 999999999999888999999999 9999999884 456889999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCC-ccCCCCcccccChhHhcCCC---CCCcchHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR-TRGLTGTARYASVNAHQWLD---QSPRDDLEALCYTL  163 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~-~~~~~~~~~~~aPE~~~~~~---~~~~~Dv~slg~~l  163 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+............ .....++..|+|||.+.+..   .+.++||||+|+++
T Consensus       120 i~H~dl~~~nil~~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il  196 (264)
T cd06626         120 IVHRDIKPANIFLDHN---GVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVV  196 (264)
T ss_pred             cccCCCCHHHEEECCC---CCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHH
Confidence            9999999999999765   88999999998766443322111 12346788999999998766   78899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhh--cCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAIC--EGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +++++|..||......  ......+...    ..+..+  ..+++.+.+++..||+.+|++||++.+++.
T Consensus       197 ~~l~~g~~pf~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         197 LEMATGKRPWSELDNE--FQIMFHVGAG----HKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHhCCCCccCCcch--HHHHHHHhcC----CCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            9999999999865322  1111111111    111111  245888999999999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=7.4e-35  Score=232.22  Aligned_cols=215  Identities=21%  Similarity=0.224  Sum_probs=172.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++++. ||||+++++.+..+...|+++|++ +++|.+++.. ...+++..+..++.|++.||++||+.|
T Consensus        36 ~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~  113 (265)
T cd05579          36 QVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN-VGSLDEDVARIYIAEIVLALEYLHSNG  113 (265)
T ss_pred             HHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            4557889999999998 999999999999999999999999 8999999985 347899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-----CCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-----RIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ++|+||+|+||+++.+   +.++|+|||++.........     ........++..|++||...+...+.++|+||||++
T Consensus       114 i~H~di~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~  190 (265)
T cd05579         114 IIHRDLKPDNILIDSN---GHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCI  190 (265)
T ss_pred             eecCCCCHHHeEEcCC---CCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHH
Confidence            9999999999999876   88999999987654332110     011134467889999999988888999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      ++++++|..||....   .......+......  .+.. ..++..+.+++.+||+.+|++||++..+.+.+.
T Consensus       191 ~~~l~~g~~p~~~~~---~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         191 LYEFLVGIPPFHGET---PEEIFQNILNGKIE--WPED-VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHhCCCCCCCCC---HHHHHHHHhcCCcC--CCcc-ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            999999999998643   22323333222211  1111 224899999999999999999999966655443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=5.2e-35  Score=237.23  Aligned_cols=212  Identities=22%  Similarity=0.370  Sum_probs=168.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR-KKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i   88 (257)
                      ...+..|+.++..+.+||||+++++++..+...+++||++++++.+++......+++..+..++.|++.|++|||+ .|+
T Consensus        57 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i  136 (296)
T cd06618          57 NKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGV  136 (296)
T ss_pred             HHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence            3456778888888878999999999999999999999999888888887656689999999999999999999997 699


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC----CCCcchHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD----QSPRDDLEALCYTLV  164 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~~~Dv~slg~~l~  164 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.........    ....++..|+|||.+.+..    .+.++|+||||+++|
T Consensus       137 ~H~dl~p~nill~~~---~~~kL~dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  209 (296)
T cd06618         137 IHRDVKPSNILLDAS---GNVKLCDFGISGRLVDSKAK----TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLV  209 (296)
T ss_pred             ecCCCcHHHEEEcCC---CCEEECccccchhccCCCcc----cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHH
Confidence            999999999999765   89999999998655332111    2335778999999987653    688999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +|++|..||.....  ..+.+..+.......  ......++..+.+++.+||+.||++||++++++..
T Consensus       210 el~~g~~p~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         210 ELATGQFPYKNCKT--EFEVLTKILQEEPPS--LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHhCCCCCCcchh--HHHHHHHHhcCCCCC--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            99999999976322  122222222221111  11112478899999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=8.4e-35  Score=240.05  Aligned_cols=239  Identities=15%  Similarity=0.197  Sum_probs=176.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-----CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..++.+|+.++++++ ||||+++++++...     ...++++|+++++|.+.+.  ...+++..+..++.|++.||.+||
T Consensus        47 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH  123 (336)
T cd07849          47 CQRTLREIKILRRFK-HENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIH  123 (336)
T ss_pred             HHHHHHHHHHHHhCC-CCCcCchhheeecccccccceEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            456788999999998 99999999876543     3579999999889988876  567999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTL  163 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l  163 (257)
                      +.|++|+||+|+||+++.+   +.++|+|||++.................++..|+|||.+.+ ..++.++||||+|+++
T Consensus       124 ~~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil  200 (336)
T cd07849         124 SANVLHRDLKPSNLLLNTN---CDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCIL  200 (336)
T ss_pred             hCCeeccCCCHHHEEECCC---CCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHH
Confidence            9999999999999999766   88999999998765443222212234567889999998755 4578899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHH------------HHHH-----------HhhCChhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQR------------VTEM-----------KLTMTPEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~------------~~~~-----------~~~~~~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      |+|++|+.||...........+..            +...           ..........+..++.+.+++.+||+.+|
T Consensus       201 ~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP  280 (336)
T cd07849         201 AEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNP  280 (336)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCCh
Confidence            999999999976432111111000            0000           00001112234567889999999999999


Q ss_pred             CCCCChHHHHHH--HHHHHHhcc-cc-CCCCCcccccc
Q psy2769         221 SEEPNYGKLRDS--FRNLLENKE-RC-EFDLRYDWTLL  254 (257)
Q Consensus       221 ~~Rp~~~~~~~~--l~~~~~~~~-~~-~~~~~~~~~~~  254 (257)
                      ++||++.++++.  +++...... .. ..+.++|.+.+
T Consensus       281 ~~Rpt~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~  318 (336)
T cd07849         281 HKRITVEEALAHPYLEQYHDPSDEPVAEEPFPFDFELF  318 (336)
T ss_pred             hhCcCHHHHhcCccccccCCCCCcccCCCCCChhhccc
Confidence            999999999874  666654321 11 13445555543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.7e-34  Score=232.56  Aligned_cols=208  Identities=23%  Similarity=0.367  Sum_probs=165.0

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHRK-   86 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~-   86 (257)
                      ..+..|+....+..+||||+++++++..++..++++||+.++|.+++...   ...+++..+..++.|++.||.|||++ 
T Consensus        44 ~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  123 (283)
T cd06617          44 KRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL  123 (283)
T ss_pred             HHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            45667877766766799999999999988899999999988998888753   34689999999999999999999997 


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC----CCCCCcchHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW----LDQSPRDDLEALCYT  162 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~----~~~~~~~Dv~slg~~  162 (257)
                      +++|+||+|+||+++.+   +.++|+|||.+.......    ......++..|+|||.+.+    ..++.++|+||+|++
T Consensus       124 ~i~h~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~  196 (283)
T cd06617         124 SVIHRDVKPSNVLINRN---GQVKLCDFGISGYLVDSV----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGIT  196 (283)
T ss_pred             CeecCCCCHHHEEECCC---CCEEEeeccccccccccc----ccccccCCccccChhhcCCcccccccCccccchhhHHH
Confidence            99999999999999766   889999999987653321    1123457889999999865    345789999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhh-hcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAI-CEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|+|++|..||......  .+.+..+....    .+.. ...+|+.+.++|.+||..+|++||+++++++
T Consensus       197 l~~l~~g~~p~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         197 MIELATGRFPYDSWKTP--FQQLKQVVEEP----SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHHHHhCCCCCCccccC--HHHHHHHHhcC----CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999753321  12222222111    1111 1357899999999999999999999999976

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=2e-34  Score=228.70  Aligned_cols=209  Identities=21%  Similarity=0.225  Sum_probs=175.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..+.+.+|+++++.++ |||++++.+.+..+...++++|++ +++|.+.+...   ...++...+..++.+++.||.+||
T Consensus        42 ~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh  120 (258)
T cd08215          42 EREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH  120 (258)
T ss_pred             HHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            4557889999999998 999999999999889999999999 89999999865   377999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.|++|+||+|+||+++.+   +.++|+|||.+........   ......+++.|+|||...+...+.++|+||+|++++
T Consensus       121 ~~~~~H~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~  194 (258)
T cd08215         121 SRKILHRDIKPQNIFLTSN---GLVKLGDFGISKVLSSTVD---LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLY  194 (258)
T ss_pred             hCCEecccCChHHeEEcCC---CcEEECCccceeecccCcc---eecceeeeecccChhHhccCCCCccccHHHHHHHHH
Confidence            9999999999999999765   8899999999876544321   113456888999999998888899999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|++|..||....   ........    ........+..++..+.+++.+||..+|++||++.++++
T Consensus       195 ~l~~g~~p~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         195 ELCTLKHPFEGEN---LLELALKI----LKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHcCCCCCCCCc---HHHHHHHH----hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            9999999997643   22222222    222233344578899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=2.2e-34  Score=231.43  Aligned_cols=206  Identities=20%  Similarity=0.289  Sum_probs=171.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++..+...++|+||+ +++|.+++.  ...++...+..++.|++.|+.+||+.|+
T Consensus        46 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i  122 (277)
T cd06641          46 IEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKK  122 (277)
T ss_pred             HHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHccCCe
Confidence            456888999999998 999999999999999999999999 899999887  4578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||++........   ......++..|+|||.+.+...+.++|+||+|+++|+|++
T Consensus       123 ~h~dl~p~Ni~i~~~---~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~  196 (277)
T cd06641         123 IHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAK  196 (277)
T ss_pred             ecCCCCHHhEEECCC---CCEEEeecccceecccchh---hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHc
Confidence            999999999999765   8899999998866533211   1133467889999999988888899999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.....   ......+..    ...+.....++..+.+++.+||..+|.+||++.+++.
T Consensus       197 g~~p~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         197 GEPPHSELHP---MKVLFLIPK----NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             CCCCCCccch---HHHHHHHhc----CCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999986432   222222211    1223334568899999999999999999999999988

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=3.7e-34  Score=234.01  Aligned_cols=204  Identities=22%  Similarity=0.290  Sum_probs=166.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      +.+.+|+.++..+. |||++++++++.+....+++|||+.+++.+.+......+++.++..++.|++.||.|||+.|++|
T Consensus        66 ~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H  144 (313)
T cd06633          66 QDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIH  144 (313)
T ss_pred             HHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence            46788999999998 99999999999999999999999977888888765667899999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHHHH
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +||+|+||+++.+   +.++|+|||.+......       ....++..|+|||.+.   +..++.++|+||||+++|+|+
T Consensus       145 ~dl~p~nili~~~---~~~kL~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~  214 (313)
T cd06633         145 RDIKAGNILLTEP---GQVKLADFGSASKSSPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA  214 (313)
T ss_pred             CCCChhhEEECCC---CCEEEeecCCCcccCCC-------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHH
Confidence            9999999999765   88999999987532211       3456788999999984   345788999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||......   .....+....   .+......++..+.+++.+||+.+|.+||++.+++.
T Consensus       215 ~g~~p~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         215 ERKPPLFNMNAM---SALYHIAQND---SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             hCCCCCCCCChH---HHHHHHHhcC---CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999874322   2222222111   111122457788999999999999999999998875

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.5e-34  Score=248.21  Aligned_cols=221  Identities=17%  Similarity=0.145  Sum_probs=163.8

Q ss_pred             cccHHHHHHHHHhcC-----CCCCcEEEeeeeeC-CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHG-----APGVPHVMGYGTSG-DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~-----~~~i~~~~~~~~~~-~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .....|+.++..+..     +++++++++++... .+.|+||++++++|.+++.. ...+++..+..++.|++.||.|||
T Consensus       170 ~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH  248 (467)
T PTZ00284        170 RDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFH  248 (467)
T ss_pred             HHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEeccCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            346778888888861     34588888888754 57899999999999998874 467999999999999999999999


Q ss_pred             h-CCccccCCCCCceEeeccCC-------------CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC
Q psy2769          85 R-KKIVHRDIKPDNFLMGVREN-------------FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ  150 (257)
Q Consensus        85 ~-~~i~H~dl~~~nili~~~~~-------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  150 (257)
                      + .||+||||||+||+++.++.             ...+||+|||.+......      .....+|+.|+|||++.+..+
T Consensus       249 ~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~------~~~~~gt~~Y~APE~~~~~~~  322 (467)
T PTZ00284        249 TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS------RTAIVSTRHYRSPEVVLGLGW  322 (467)
T ss_pred             hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCccc------cccccCCccccCcHHhhcCCC
Confidence            7 69999999999999976521             125999999987532211      145678999999999999999


Q ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHH--------------------Hh---hCChhh-h------
Q psy2769         151 SPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEM--------------------KL---TMTPEA-I------  200 (257)
Q Consensus       151 ~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~---~~~~~~-~------  200 (257)
                      +.++|||||||++|||++|+.||......+....+......                    ..   +...+. .      
T Consensus       323 ~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (467)
T PTZ00284        323 MYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARA  402 (467)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcc
Confidence            99999999999999999999999875432222221111000                    00   000000 0      


Q ss_pred             ----hcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         201 ----CEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       201 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                          ....++.+.+||.+||..||++||+++++++  .+.++..
T Consensus       403 ~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        403 RPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             cchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence                0012355789999999999999999999987  5555433

>KOG0200|consensus

Probab=100.00  E-value=1.2e-34  Score=254.11  Aligned_cols=222  Identities=18%  Similarity=0.248  Sum_probs=184.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLM   71 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~   71 (257)
                      ...+.+..|+++++.+..||||+.+.|+++.++..++|+||+ .|+|.++++...               ..++..+...
T Consensus       343 ~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLls  422 (609)
T KOG0200|consen  343 SEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLS  422 (609)
T ss_pred             HHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHH
Confidence            346789999999999999999999999999999999999999 999999999654               2388999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCC
Q psy2769          72 LADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS  151 (257)
Q Consensus        72 ~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  151 (257)
                      ++.||+.|+.||++..++|||+..+||++..+   ..+||+|||+++................-+..|||||.+....++
T Consensus       423 fa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~---~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft  499 (609)
T KOG0200|consen  423 FAYQIANGMEYLASVPCVHRDLAARNVLITKN---KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFT  499 (609)
T ss_pred             HHHHHHHHHHHHhhCCccchhhhhhhEEecCC---CEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccc
Confidence            99999999999999999999999999999876   899999999998655543222111111135569999999999999


Q ss_pred             CcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         152 PRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      .++||||+|+++||+++ |..||.+....  .+.+..+..+    ...+.+..+++++.++++.||+.+|++||++.++.
T Consensus       500 ~kSDVWSfGI~L~EifsLG~~PYp~~~~~--~~l~~~l~~G----~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  500 SKSDVWSFGILLWEIFTLGGTPYPGIPPT--EELLEFLKEG----NRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECV  573 (609)
T ss_pred             ccchhhHHHHHHHHHhhCCCCCCCCCCcH--HHHHHHHhcC----CCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence            99999999999999999 99999985422  2223333333    22233477899999999999999999999999999


Q ss_pred             HHHHHHHH
Q psy2769         231 DSFRNLLE  238 (257)
Q Consensus       231 ~~l~~~~~  238 (257)
                      +.+...+.
T Consensus       574 ~~~~~~l~  581 (609)
T KOG0200|consen  574 EFFEKHLQ  581 (609)
T ss_pred             HHHHHHHH
Confidence            99999664

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.3e-34  Score=230.07  Aligned_cols=210  Identities=19%  Similarity=0.191  Sum_probs=170.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.+++.+. ||||+++++.+......++++||+ +++|.+++... ...+++..+..++.|++.||.+||+.
T Consensus        42 ~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (257)
T cd08225          42 EKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR  120 (257)
T ss_pred             hhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456789999999998 999999999999999999999999 99999998754 33578999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      +++|+||+|+||+++.+  ...++++|||.+........   ......+++.|+|||...+..++.++|+||+|++++++
T Consensus       121 ~i~H~dl~~~nil~~~~--~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l  195 (257)
T cd08225         121 KILHRDIKSQNIFLSKN--GMVAKLGDFGIARQLNDSME---LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYEL  195 (257)
T ss_pred             CcccccCCHHHEEEcCC--CCeEEecccccchhccCCcc---cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence            99999999999999754  23579999998876543321   11334688899999999888889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   ..+....+...    ........++..+.+++.+||..+|++||+++++++
T Consensus       196 ~~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         196 CTLKHPFEGNN---LHQLVLKICQG----YFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HhCCCCCCCcc---HHHHHHHHhcc----cCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            99999997642   22222222211    122233567889999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=1.3e-34  Score=238.13  Aligned_cols=232  Identities=18%  Similarity=0.241  Sum_probs=175.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++.+++.. ....++++|+++++|.+++.  ...++...+..++.|++.||.+||+.|+
T Consensus        53 ~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~i  129 (328)
T cd07856          53 AKRTYRELKLLKHLR-HENIISLSDIFISPLEDIYFVTELLGTDLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAGV  129 (328)
T ss_pred             hHHHHHHHHHHHhcC-CCCeeeEeeeEecCCCcEEEEeehhccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            456889999999998 9999999998865 55789999999889988887  4568889999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||+|+||+++.+   +.++|+|||.+......      .....++..|+|||.+.+ ..++.++|+||+|+++++|+
T Consensus       130 iH~dl~p~Nili~~~---~~~~l~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~  200 (328)
T cd07856         130 VHRDLKPSNILINEN---CDLKICDFGLARIQDPQ------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEML  200 (328)
T ss_pred             ccCCCCHHHEeECCC---CCEEeCccccccccCCC------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHH
Confidence            999999999999765   88999999988643221      133467888999998766 46789999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHH---------------------HH--HhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVT---------------------EM--KLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~---------------------~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      +|..||...........+....                     ..  ....+.......+++.+.++|.+||..+|++||
T Consensus       201 tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~  280 (328)
T cd07856         201 EGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRI  280 (328)
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCC
Confidence            9999997643322111111100                     00  001112223356788999999999999999999


Q ss_pred             ChHHHHHH--HHHHHHhccccCCCCCccccc
Q psy2769         225 NYGKLRDS--FRNLLENKERCEFDLRYDWTL  253 (257)
Q Consensus       225 ~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~  253 (257)
                      ++++++..  ++.....-.+.-..+.+||..
T Consensus       281 t~~ell~~~~~~~~~~~~~~~~~~~~~~~~~  311 (328)
T cd07856         281 SAAEALAHPYLAPYHDPTDEPVAEEKFDWSF  311 (328)
T ss_pred             CHHHHhcCCccccccCCccccCchhhcCCch
Confidence            99998763  433333322333445677753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-34  Score=233.18  Aligned_cols=211  Identities=15%  Similarity=0.157  Sum_probs=167.7

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ..+.+|+.+++.+. ||+++++++++......++++||++++|.+++.... ..+++..+..++.|++.||.+||+.+++
T Consensus        43 ~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~  121 (283)
T cd07835          43 STAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVL  121 (283)
T ss_pred             hHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            46788999999998 999999999999999999999999879999887533 3689999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||.+..........   ....++..|+|||.+.+. .++.++|+||+|+++|+|++
T Consensus       122 H~dl~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~  195 (283)
T cd07835         122 HRDLKPQNLLIDRE---GALKLADFGLARAFGVPVRTY---THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVN  195 (283)
T ss_pred             CCCCCHHHEEEcCC---CcEEEeecccccccCCCcccc---CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHh
Confidence            99999999999865   899999999986543321111   223467889999988664 46889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHH------------------------hhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMK------------------------LTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |..||......   .....+.+..                        ...........+++.+.+++.+||+.+|++||
T Consensus       196 g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  272 (283)
T cd07835         196 RRPLFPGDSEI---DQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI  272 (283)
T ss_pred             CCCCCCCCCHH---HHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCc
Confidence            99999864321   1111111110                        00111223356788999999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      +++++++
T Consensus       273 t~~~il~  279 (283)
T cd07835         273 SAKAALQ  279 (283)
T ss_pred             CHHHHhc
Confidence            9998874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG0586|consensus

Probab=100.00  E-value=1.3e-35  Score=246.40  Aligned_cols=205  Identities=23%  Similarity=0.275  Sum_probs=178.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++.|. ||||++++.+......+|+||||+ +|.+++++.. ..++.+.++..++.|+++|++|+|+++|
T Consensus        99 ~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~-~gr~~e~~ar~~F~q~vsaveYcH~k~i  176 (596)
T KOG0586|consen   99 RQKLGREVDIMKSLN-HPNIVKLFSVIETEATLYLVMEYASGGELFDYLVK-HGRMKEKEARAKFRQIVSAVEYCHSKNI  176 (596)
T ss_pred             HHHHHHHHHHHHhcC-CcceeeeeeeeeecceeEEEEEeccCchhHHHHHh-cccchhhhhhhhhHHHHHHHHHHhhcce
Confidence            456899999999999 999999999999999999999999 9999999995 5667779999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l~  167 (257)
                      +|+|||.+|++++.+   -++||+|||++..+....    ......|++.|.|||+..+..+ ++++|+||+|+++|-|+
T Consensus       177 vHrdLk~eNilL~~~---mnikIaDfgfS~~~~~~~----~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV  249 (596)
T KOG0586|consen  177 VHRDLKAENILLDEN---MNIKIADFGFSTFFDYGL----MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALV  249 (596)
T ss_pred             eccccchhhcccccc---cceeeeccccceeecccc----cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeee
Confidence            999999999999876   679999999998876442    3377889999999999999887 78999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .|..||++..-   .+.-.++..+++..+     ..++.++.++|+++|..+|.+|++++++++
T Consensus       250 ~GsLPFDG~~l---k~Lr~rvl~gk~rIp-----~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  250 EGSLPFDGQNL---KELRPRVLRGKYRIP-----FYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             ecccccCCccc---ccccchheeeeeccc-----ceeechhHHHHHHhhccCccccCCHHHhhh
Confidence            99999997432   222233333444333     668889999999999999999999999965

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=6.8e-34  Score=231.96  Aligned_cols=213  Identities=19%  Similarity=0.196  Sum_probs=163.4

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCC--------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGD--------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~--------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+|+.+++++. ||+|+++++++....        ..++++||++++|.+.+......+++.++..++.|++.||.+|
T Consensus        57 ~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~l  135 (310)
T cd07865          57 TALREIKILQLLK-HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYI  135 (310)
T ss_pred             HHHHHHHHHHhCC-CCCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            4578999999998 999999999876543        4599999998899988885555799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCCC-CCCcchHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCY  161 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~  161 (257)
                      |+.|++|+||+|+||+++.+   +.++|+|||.+.......... .......++..|+|||.+.+.. .+.++|+||+|+
T Consensus       136 H~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~  212 (310)
T cd07865         136 HRNKILHRDMKAANILITKD---GILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGC  212 (310)
T ss_pred             HHCCeeccCCCHHHEEECCC---CcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHH
Confidence            99999999999999999766   899999999987654332111 1113345778899999987653 678999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhh--------------------------h-hcCCcHHHHHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA--------------------------I-CEGTPPEFAEFLRY  214 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~-~~~~~~~~~~li~~  214 (257)
                      ++|+|++|..||...........+..+.   .......                          . ....+..+.++|.+
T Consensus       213 ~l~el~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~  289 (310)
T cd07865         213 IMAEMWTRSPIMQGNTEQHQLTLISQLC---GSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDK  289 (310)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHh---CCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHH
Confidence            9999999999998744322222222211   1000000                          0 01135678899999


Q ss_pred             HhcCCCCCCCChHHHHH
Q psy2769         215 CRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       215 ~l~~~p~~Rp~~~~~~~  231 (257)
                      ||..||++||+++++++
T Consensus       290 ~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         290 LLVLDPAKRIDADTALN  306 (310)
T ss_pred             HhcCChhhccCHHHHhc
Confidence            99999999999998874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=5.4e-34  Score=231.05  Aligned_cols=212  Identities=17%  Similarity=0.151  Sum_probs=165.6

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ..+.+|+.+++++. ||||+++++++..+...++||||++++|.+.+... ...++...+..++.|++.||.+||++|++
T Consensus        46 ~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~  124 (294)
T PLN00009         46 STAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVL  124 (294)
T ss_pred             HHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            46788999999997 99999999999999999999999977888888643 33467888999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+  ++.++++|||++.........   .....+++.|+|||.+.+. .++.++||||+|+++|+|++
T Consensus       125 H~dl~p~nill~~~--~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~t  199 (294)
T PLN00009        125 HRDLKPQNLLIDRR--TNALKLADFGLARAFGIPVRT---FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN  199 (294)
T ss_pred             CCCCCcceEEEECC--CCEEEEcccccccccCCCccc---cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence            99999999999743  257999999998654332111   1234568899999998664 56889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHh------------------------hCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKL------------------------TMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |..||......+.   +..+.....                        ..........+++.+.+++.+|++.+|++||
T Consensus       200 g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp  276 (294)
T PLN00009        200 QKPLFPGDSEIDE---LFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI  276 (294)
T ss_pred             CCCCCCCCCHHHH---HHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc
Confidence            9999986432221   111111000                        0001112245788899999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      +++++++
T Consensus       277 s~~~~l~  283 (294)
T PLN00009        277 TARAALE  283 (294)
T ss_pred             CHHHHhc
Confidence            9999876

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=2.4e-34  Score=232.67  Aligned_cols=205  Identities=19%  Similarity=0.226  Sum_probs=164.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++.+||+|+++++.+..+...++|+||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i  126 (290)
T cd05613          48 TEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGI  126 (290)
T ss_pred             HHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            3567889999999988999999999999988999999999 9999999884 4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC--CCCCcchHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL--DQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slg~~l~~l  166 (257)
                      +|+||+|+||+++.+   +.++|+|||++........  .......++..|+|||.+.+.  ..+.++||||+|+++|+|
T Consensus       127 ~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~l  201 (290)
T cd05613         127 IYRDIKLENILLDSN---GHVVLTDFGLSKEFHEDEV--ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYEL  201 (290)
T ss_pred             eccCCCHHHeEECCC---CCEEEeeCccceecccccc--cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHH
Confidence            999999999999766   8999999999876533211  111345688899999998753  357899999999999999


Q ss_pred             HhCCCCCCCCCCccH-HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         167 LRGKLPWQSIKSDNE-ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      ++|..||........ ......+...     .+.....+++.+.+++.+||..+|++||+
T Consensus       202 l~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ll~~~l~~~p~~R~~  256 (290)
T cd05613         202 LTGASPFTVDGEKNSQAEISRRILKS-----EPPYPQEMSALAKDIIQRLLMKDPKKRLG  256 (290)
T ss_pred             hcCCCCCCcCCccccHHHHHHHhhcc-----CCCCCccCCHHHHHHHHHHhcCCHHHhcC
Confidence            999999975332222 2222221111     11223568889999999999999999984

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1.9e-34  Score=232.66  Aligned_cols=211  Identities=18%  Similarity=0.203  Sum_probs=166.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++......++++||+ +++|.++.. ....+++..+..++.|++.||+|||+.|+
T Consensus        44 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  121 (286)
T cd07846          44 KKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK-YPNGLDESRVRKYLFQILRGIEFCHSHNI  121 (286)
T ss_pred             hHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            346788999999998 999999999999999999999999 777766555 34568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+|++|+||+++.+   +.++++|||++.........   .....++..|+|||...+. ..+.++||||||+++++|+
T Consensus       122 ~h~~l~p~ni~~~~~---~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~  195 (286)
T cd07846         122 IHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEV---YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEML  195 (286)
T ss_pred             cccCCCHHHEEECCC---CcEEEEeeeeeeeccCCccc---cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHH
Confidence            999999999999766   88999999998765443211   1345678899999998764 4578899999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhC--------------------------ChhhhhcCCcHHHHHHHHHHhcCCCC
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTM--------------------------TPEAICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      +|..||.....   .+...++.......                          ......+.++..+.+++.+||..+|+
T Consensus       196 ~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  272 (286)
T cd07846         196 TGEPLFPGDSD---IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPD  272 (286)
T ss_pred             cCCCCCCCCch---HHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcc
Confidence            99999975332   11111111100000                          00112346788999999999999999


Q ss_pred             CCCChHHHHH
Q psy2769         222 EEPNYGKLRD  231 (257)
Q Consensus       222 ~Rp~~~~~~~  231 (257)
                      +||++.++++
T Consensus       273 ~Rp~~~~il~  282 (286)
T cd07846         273 DRPSSSQLLH  282 (286)
T ss_pred             cchhHHHHhc
Confidence            9999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=6.4e-35  Score=236.37  Aligned_cols=208  Identities=21%  Similarity=0.318  Sum_probs=168.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. |||++++++++...+..++|+||+ +++|.+++.  ...++...+..++.|++.||.+||+.|+
T Consensus        60 ~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~l~~~~~~~i~~~l~~al~~LH~~gi  136 (293)
T cd06647          60 KELIINEILVMRENK-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQV  136 (293)
T ss_pred             HHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEEEEecCCCCcHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            456888999999998 999999999999999999999999 999999987  3568899999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.........   .....+++.|++||.+.+...+.++|+||||+++|++++
T Consensus       137 ~H~dL~p~Nili~~~---~~~kL~dfg~~~~~~~~~~~---~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~  210 (293)
T cd06647         137 IHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE  210 (293)
T ss_pred             eeccCCHHHEEEcCC---CCEEEccCcceecccccccc---cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999766   78999999987655433211   133467888999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.......   ....+....  .........++..+.+++++||+.+|++||++++++.
T Consensus       211 g~~pf~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         211 GEPPYLNENPLR---ALYLIATNG--TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             CCCCCCCCChhh---heeehhcCC--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999998643221   111111111  1111112456788999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=6.4e-34  Score=228.85  Aligned_cols=205  Identities=22%  Similarity=0.283  Sum_probs=163.0

Q ss_pred             cHHHHHHHHHh--cCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          13 LFWERNFYEKL--HGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        13 ~~~E~~~~~~l--~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +..|..++..+  .+||+|+.+.+++...+..++||||+ |++|.+++.. ...+++..+..++.|++.||.|||+.+++
T Consensus        41 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~  119 (278)
T cd05606          41 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVV  119 (278)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            44455444443  24899999999999999999999999 9999988874 56799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||++..+.....     ....++..|+|||.+.+. .++.++|+||+|+++|+|++
T Consensus       120 H~di~p~nili~~~---~~~kl~dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~  191 (278)
T cd05606         120 YRDLKPANILLDEH---GHVRISDLGLACDFSKKKP-----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR  191 (278)
T ss_pred             cCCCCHHHEEECCC---CCEEEccCcCccccCccCC-----cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh
Confidence            99999999999766   7899999999865533211     344688999999999754 57889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      |..||................     ......+..+++.+.+++++||..+|.+||     +++++++
T Consensus       192 g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         192 GHSPFRQHKTKDKHEIDRMTL-----TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             CCCCCCCCCccchHHHHHHhh-----ccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            999998754333222111111     112223356789999999999999999999     7777763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.1e-34  Score=237.19  Aligned_cols=223  Identities=15%  Similarity=0.184  Sum_probs=176.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-----ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-----YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-----~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ..+.+.+|+.+++.+. ||||+++.+++....     ..|++|+|++++|.+++.. ...+++..+..++.|++.||.+|
T Consensus        42 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~L  119 (330)
T cd07834          42 DAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYL  119 (330)
T ss_pred             hhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            3467899999999998 999999999987764     7899999997789888874 44899999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~  162 (257)
                      |+.|++|+||+|+||+++.+   +.++|+|||.+.................++..|+|||.+.+. ..+.++|+||+|++
T Consensus       120 H~~gi~H~dlkp~nili~~~---~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~i  196 (330)
T cd07834         120 HSANVIHRDLKPSNILVNSN---CDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCI  196 (330)
T ss_pred             HhCCeecCCCCHHHEEEcCC---CCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHH
Confidence            99999999999999999866   899999999988765442111122445678899999999887 78899999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHh--------------------------hCChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKL--------------------------TMTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +++|++|..||......   +.+..+.....                          ..........++..+.++|.+||
T Consensus       197 l~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  273 (330)
T cd07834         197 FAELLTRKPLFPGRDYI---DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKML  273 (330)
T ss_pred             HHHHHcCCCCcCCCCHH---HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHc
Confidence            99999999999875322   21222111100                          01111223457889999999999


Q ss_pred             cCCCCCCCChHHHHH--HHHHHHHh
Q psy2769         217 GLAFSEEPNYGKLRD--SFRNLLEN  239 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~--~l~~~~~~  239 (257)
                      +.+|++||++++++.  .+++....
T Consensus       274 ~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         274 VFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             cCChhhCCCHHHHHhCccHHhhccc
Confidence            999999999999987  46655543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG1165|consensus

Probab=100.00  E-value=8.5e-34  Score=220.22  Aligned_cols=254  Identities=46%  Similarity=0.798  Sum_probs=232.9

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ||+++.+...-++..|...++.|.+.++|+++|-++..+.+..+|+|.+|.||.|++..++++|+..++.-++.|++.-+
T Consensus        58 IKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~ri  137 (449)
T KOG1165|consen   58 IKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRI  137 (449)
T ss_pred             EEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHH
Confidence            68899988888999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccC--CCCeEEEEeCCcceecCCCCCC----CCCccCCCCcccccChhHhcCCCCCCcc
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRE--NFNTVYLVDFGLAVDFCPNCPP----RIRTRGLTGTARYASVNAHQWLDQSPRD  154 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~--~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~  154 (257)
                      .++|++.++.|||||+|+||..-+  +...+-++|||++.........    ........||..||+-....+.+.+.+.
T Consensus       138 e~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRD  217 (449)
T KOG1165|consen  138 EYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRD  217 (449)
T ss_pred             HHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhh
Confidence            999999999999999999998632  2357899999999876544311    1112445799999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |+-|||=++++.+-|..||.++...+..+.+++|...+...+....+.++|.++..-++.....+..+-|+++-+...+.
T Consensus       218 DLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~  297 (449)
T KOG1165|consen  218 DLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFD  297 (449)
T ss_pred             hHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccccCCCCCccccccc
Q psy2769         235 NLLENKERCEFDLRYDWTLLE  255 (257)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~  255 (257)
                      +++...+ .+.|..+||..+-
T Consensus       298 dvldr~g-~t~Dg~yDW~~ln  317 (449)
T KOG1165|consen  298 DVLDRLG-ETDDGEYDWMGLN  317 (449)
T ss_pred             HHHHhcC-CcccccccccccC
Confidence            9999999 9999999998764

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=7.6e-34  Score=234.28  Aligned_cols=212  Identities=17%  Similarity=0.200  Sum_probs=168.1

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR   91 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~   91 (257)
                      .+.+|+.++.++. ||||+++++++......+++||++.++|.+++.. ...+++..+..++.|++.||.+||+.|++|+
T Consensus        66 ~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~  143 (335)
T PTZ00024         66 TTLRELKIMNEIK-HENIMGLVDVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHR  143 (335)
T ss_pred             hHHHHHHHHHhCC-CcceeeeeEEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            4778999999998 9999999999999999999999998899999874 5679999999999999999999999999999


Q ss_pred             CCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-----------CCCCccCCCCcccccChhHhcCCC-CCCcchHHHH
Q psy2769          92 DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-----------PRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEAL  159 (257)
Q Consensus        92 dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-----------~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~sl  159 (257)
                      ||+|+||+++.+   +.++|+|||.+........           .........++..|+|||.+.+.. .+.++|+||+
T Consensus       144 dl~~~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl  220 (335)
T PTZ00024        144 DLSPANIFINSK---GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSV  220 (335)
T ss_pred             cccHHHeEECCC---CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHH
Confidence            999999999766   8899999999876542110           011112234677899999987643 5889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh-----------------------CChhhhhcCCcHHHHHHHHHHh
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT-----------------------MTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      |+++|+|++|..||......   ..+..+......                       ..........+..+.++|..||
T Consensus       221 G~~l~el~tg~~p~~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  297 (335)
T PTZ00024        221 GCIFAELLTGKPLFPGENEI---DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLL  297 (335)
T ss_pred             HHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHc
Confidence            99999999999999875332   222222221100                       0011122456788999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      +.+|++||++++++.
T Consensus       298 ~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        298 KLNPLERISAKEALK  312 (335)
T ss_pred             CCCchhccCHHHHhc
Confidence            999999999999986

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.5e-34  Score=226.17  Aligned_cols=210  Identities=20%  Similarity=0.255  Sum_probs=168.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+|+.+++++. ||+|+++++++.+.  ...++++|++ +++|.+++.. ...+++..+..++.|++.||.+||+.
T Consensus        48 ~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~  125 (264)
T cd06653          48 VNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQGVSYLHSN  125 (264)
T ss_pred             HHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            347888999999998 99999999998754  4578999999 8999999884 45688999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+.................++..|+|||.+.+...+.++|+||||++++++
T Consensus       126 ~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  202 (264)
T cd06653         126 MIVHRDIKGANILRDSA---GNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEM  202 (264)
T ss_pred             CEecCCCCHHHEEEcCC---CCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHH
Confidence            99999999999999765   789999999987654322211222345688899999999988889999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   ....+..+   ......+..+..+++.+.+++.+||. +|..||++.+++.
T Consensus       203 ~~g~~p~~~~~---~~~~~~~~---~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         203 LTEKPPWAEYE---AMAAIFKI---ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HhCCCCCCccC---HHHHHHHH---HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            99999998642   22222221   21222334457788999999999998 5799999997764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=4e-34  Score=232.57  Aligned_cols=215  Identities=18%  Similarity=0.140  Sum_probs=166.3

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCC----------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGD----------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~----------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ..+.+|+.++.++. |||++++++++.+..          ..++++||+++++.+.+......+++..+..++.|++.||
T Consensus        51 ~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL  129 (302)
T cd07864          51 ITAIREIKILRQLN-HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGL  129 (302)
T ss_pred             HHHHHHHHHHHhCC-CCCeeeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            45678999999998 999999999887644          7899999997788888875455799999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEAL  159 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~sl  159 (257)
                      +|||+.|++|+||+|+||+++.+   +.++|+|||.+.........  ......++..|+|||.+.+. ..+.++||||+
T Consensus       130 ~~LH~~~i~H~dl~p~nili~~~---~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~sl  204 (302)
T cd07864         130 NYCHKKNFLHRDIKCSNILLNNK---GQIKLADFGLARLYNSEESR--PYTNKVITLWYRPPELLLGEERYGPAIDVWSC  204 (302)
T ss_pred             HHHHhCCeecCCCCHHHEEECCC---CcEEeCcccccccccCCccc--ccccceeccCccChHHhcCCCCCCchhHHHHH
Confidence            99999999999999999999766   88999999998765443211  11223457789999988654 46889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhC----------------------ChhhhhcCCcHHHHHHHHHHhc
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTM----------------------TPEAICEGTPPEFAEFLRYCRG  217 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~li~~~l~  217 (257)
                      |+++++|++|+.||...........+........+.                      ........+|..+.+++.+||.
T Consensus       205 G~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  284 (302)
T cd07864         205 GCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLT  284 (302)
T ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHcc
Confidence            999999999999998643322222222211111000                      0011224578999999999999


Q ss_pred             CCCCCCCChHHHHH
Q psy2769         218 LAFSEEPNYGKLRD  231 (257)
Q Consensus       218 ~~p~~Rp~~~~~~~  231 (257)
                      .+|++||++.++++
T Consensus       285 ~~P~~Rp~~~~il~  298 (302)
T cd07864         285 LDPSKRCTAEEALN  298 (302)
T ss_pred             CChhhCCCHHHHhc
Confidence            99999999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3.1e-34  Score=236.52  Aligned_cols=218  Identities=14%  Similarity=0.168  Sum_probs=168.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..+.+.+|+.+++++. ||||+++++++..    ....++|+||++++|.+.+.. ...+++..+..++.|++.||.+||
T Consensus        47 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH  124 (334)
T cd07855          47 LAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIH  124 (334)
T ss_pred             chHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3456788999999998 9999999998753    346899999997789888874 456999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      +.|++|+||+|+||+++.+   +.++|+|||.+.......... .......++..|+|||.+.+ ..++.++|+||+|++
T Consensus       125 ~~~ivH~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~  201 (334)
T cd07855         125 SANVIHRDLKPSNLLVNED---CELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCI  201 (334)
T ss_pred             HCCeecCCCCHHHEEEcCC---CcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHH
Confidence            9999999999999999866   899999999987654432111 11123468889999999866 357889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHH-----------------HH------HHHhhCChhhhhcCCcHHHHHHHHHHhcCC
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQR-----------------VT------EMKLTMTPEAICEGTPPEFAEFLRYCRGLA  219 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~-----------------~~------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  219 (257)
                      +|+|++|..||...........+..                 +.      ...............++.+.++|++||+.+
T Consensus       202 l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  281 (334)
T cd07855         202 FAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFD  281 (334)
T ss_pred             HHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCC
Confidence            9999999999976432211111000                 00      000111122333567899999999999999


Q ss_pred             CCCCCChHHHHH
Q psy2769         220 FSEEPNYGKLRD  231 (257)
Q Consensus       220 p~~Rp~~~~~~~  231 (257)
                      |++||++++++.
T Consensus       282 P~~Rpt~~~~l~  293 (334)
T cd07855         282 PEERITVEQALQ  293 (334)
T ss_pred             hhhCcCHHHHHh
Confidence            999999998876

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=4e-34  Score=237.56  Aligned_cols=219  Identities=16%  Similarity=0.190  Sum_probs=167.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...+.+|+.+++++. ||||+++++++...      ...|+|+||++++|.+.+..   .++...+..++.|++.||.+|
T Consensus        59 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~L  134 (353)
T cd07850          59 AKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHL  134 (353)
T ss_pred             HHHHHHHHHHHHhcC-CCCCcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHH
Confidence            346778999999998 99999999988643      35799999998899888773   389999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.|++|+||||+||+++.+   +.++|+|||.+........    .....++..|+|||.+.+..++.++||||+|+++
T Consensus       135 H~~gi~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l  207 (353)
T cd07850         135 HSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFM----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM  207 (353)
T ss_pred             HhCCeeeCCCCHHHEEECCC---CCEEEccCccceeCCCCCC----CCCCcccccccCHHHHhCCCCCCchhhHhHHHHH
Confidence            99999999999999999766   8899999999876543211    1344678899999999998999999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHH-------------------HHHHhhCC---hhh-------------hhcCCcHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRV-------------------TEMKLTMT---PEA-------------ICEGTPPEF  208 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~~~~~---~~~-------------~~~~~~~~~  208 (257)
                      ++|++|..||...........+...                   ........   ...             .....+..+
T Consensus       208 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (353)
T cd07850         208 GEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQA  287 (353)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHH
Confidence            9999999999864322211111000                   00000000   000             011346678


Q ss_pred             HHHHHHHhcCCCCCCCChHHHHH--HHHHHHHh
Q psy2769         209 AEFLRYCRGLAFSEEPNYGKLRD--SFRNLLEN  239 (257)
Q Consensus       209 ~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~~  239 (257)
                      .++|.+||..||++||++.+++.  .++.....
T Consensus       288 ~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~  320 (353)
T cd07850         288 RDLLSKMLVIDPEKRISVDDALQHPYINVWYDP  320 (353)
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcChhHhhccCC
Confidence            99999999999999999999976  45555443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0986|consensus

Probab=100.00  E-value=9.8e-35  Score=233.37  Aligned_cols=231  Identities=23%  Similarity=0.263  Sum_probs=188.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ......++|-.++.++. .|+|+.+--.|++.+.+|+|+..| ||+|.--+... +..|++..+..++.+|+.||.+||+
T Consensus       227 ~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~  305 (591)
T KOG0986|consen  227 KGETMALNEKQILEKVS-SPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR  305 (591)
T ss_pred             hhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh
Confidence            34456788999999998 899999988999999999999999 99987655532 4579999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .+||.||+||+|||++.+   |.++|+|+|++..+....+.    ..++||..|||||++.+..|+...|.|||||++|+
T Consensus       306 ~~iVYRDLKPeNILLDd~---GhvRISDLGLAvei~~g~~~----~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYe  378 (591)
T KOG0986|consen  306 RRIVYRDLKPENILLDDH---GHVRISDLGLAVEIPEGKPI----RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYE  378 (591)
T ss_pred             cceeeccCChhheeeccC---CCeEeeccceEEecCCCCcc----ccccCcccccCHHHHcCCcccCCccHHHHHhHHHH
Confidence            999999999999999876   99999999999988665432    55699999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCC
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEF  245 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~  245 (257)
                      |+.|+.||.........+.+.+..    ...+.+....+|++.+++.+.+|+.||.+|.-...-   =.+-.+.   ..+
T Consensus       379 mi~G~sPFr~~KeKvk~eEvdrr~----~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~---ga~evk~---Hpf  448 (591)
T KOG0986|consen  379 MIAGHSPFRQRKEKVKREEVDRRT----LEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGE---GAQEVKE---HPF  448 (591)
T ss_pred             HHcccCchhhhhhhhhHHHHHHHH----hcchhhcccccCHHHHHHHHHHHccCHHHhccCCCc---Ccchhhh---Ccc
Confidence            999999999876655554433321    223445558899999999999999999999865421   0111122   335


Q ss_pred             CCCcccccccc
Q psy2769         246 DLRYDWTLLER  256 (257)
Q Consensus       246 ~~~~~~~~~~~  256 (257)
                      -...+|..||.
T Consensus       449 Fk~lnw~rlea  459 (591)
T KOG0986|consen  449 FKDLNWRRLEA  459 (591)
T ss_pred             cccCCHhHHhc
Confidence            66688887764

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-33  Score=227.76  Aligned_cols=211  Identities=16%  Similarity=0.209  Sum_probs=167.6

Q ss_pred             cccHHHHHHHHHhc--CCCCCcEEEeeeeeCCc-----cEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLH--GAPGVPHVMGYGTSGDY-----NILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        11 ~~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~~-----~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..+.+|+.++.++.  .||+++++++++.....     .+++||+++++|.+++.... ..+++..+..++.|++.||.+
T Consensus        43 ~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~  122 (287)
T cd07838          43 LSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDF  122 (287)
T ss_pred             hhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHH
Confidence            45778988888885  49999999999987766     89999999778999887543 368999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ||+.|++|+||+|+||+++.+   +.++|+|||.+.........    ....++..|+|||.+.+..++.++|+||+|++
T Consensus       123 LH~~~i~h~~l~~~nili~~~---~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~  195 (287)
T cd07838         123 LHSHRIVHRDLKPQNILVTSD---GQVKIADFGLARIYSFEMAL----TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCI  195 (287)
T ss_pred             HHHCCeeeccCChhhEEEccC---CCEEEeccCcceeccCCccc----ccccccccccChHHhccCCCCCcchhhhHHHH
Confidence            999999999999999999876   88999999998765433211    23457888999999998888999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHh----------------------hCChhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKL----------------------TMTPEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      +|+|++|.+||......   +.+.++.+...                      ........+..++.+.+++.+||+.||
T Consensus       196 l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  272 (287)
T cd07838         196 FAELFRRRPLFRGTSEA---DQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNP  272 (287)
T ss_pred             HHHHHhCCCcccCCChH---HHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCC
Confidence            99999999999874332   22222222100                      001112223456788999999999999


Q ss_pred             CCCCChHHHHH
Q psy2769         221 SEEPNYGKLRD  231 (257)
Q Consensus       221 ~~Rp~~~~~~~  231 (257)
                      ++||++++++.
T Consensus       273 ~~Rp~~~~il~  283 (287)
T cd07838         273 HKRISAFEALQ  283 (287)
T ss_pred             ccCCCHHHHhc
Confidence            99999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=8.1e-34  Score=234.32  Aligned_cols=217  Identities=18%  Similarity=0.196  Sum_probs=167.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+|+.++.++.+||||+++++++...  ...++|+|+++++|.+.+..  ..+++..+..++.|++.||.+||+.|
T Consensus        50 ~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~  127 (337)
T cd07852          50 AQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGN  127 (337)
T ss_pred             hhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            456778999999995599999999988643  36899999997799988873  37889999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC--CCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP--RIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLV  164 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~  164 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.........  ........++..|+|||.+.+ ...+.++|+||+|+++|
T Consensus       128 i~H~dl~p~nill~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~  204 (337)
T cd07852         128 VIHRDLKPSNILLNSD---CRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILG  204 (337)
T ss_pred             eecCCCCHHHEEEcCC---CcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHH
Confidence            9999999999999876   89999999988765443211  112234568889999998765 35688999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHH-----------------------HHHhhCChhhhhcCCcHHHHHHHHHHhcCCCC
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVT-----------------------EMKLTMTPEAICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      +|++|+.||...........+....                       ..............++..+.++|..||+.+|+
T Consensus       205 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~  284 (337)
T cd07852         205 EMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPN  284 (337)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcc
Confidence            9999999997643322111111000                       00000111222345788999999999999999


Q ss_pred             CCCChHHHHH
Q psy2769         222 EEPNYGKLRD  231 (257)
Q Consensus       222 ~Rp~~~~~~~  231 (257)
                      +||++.++++
T Consensus       285 ~Rps~~~il~  294 (337)
T cd07852         285 KRLTAEEALE  294 (337)
T ss_pred             cccCHHHHhh
Confidence            9999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-33  Score=227.01  Aligned_cols=212  Identities=17%  Similarity=0.175  Sum_probs=169.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+..|+.+++++. ||+++++++++......++++|+++++|.+++......++...+..++.|++.||.+||+.|++
T Consensus        42 ~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~  120 (282)
T cd07829          42 PSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRIL  120 (282)
T ss_pred             cHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            356788999999998 9999999999999899999999997799999986545799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||+|+||+++.+   +.++|+|||.+..........   ....++..|+|||.+.+. ..+.++|+||||++++++++
T Consensus       121 H~~l~~~ni~~~~~---~~~~l~d~g~~~~~~~~~~~~---~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~  194 (282)
T cd07829         121 HRDLKPQNILINRD---GVLKLADFGLARAFGIPLRTY---THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMIT  194 (282)
T ss_pred             cCCCChheEEEcCC---CCEEEecCCcccccCCCcccc---CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHh
Confidence            99999999999765   889999999887654332111   233456789999998776 67889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhh------------------------CChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLT------------------------MTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |..||.......   .+.++......                        .......+..+..+.+++++||..+|++||
T Consensus       195 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp  271 (282)
T cd07829         195 GKPLFPGDSEID---QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI  271 (282)
T ss_pred             CCCCCCCccHHH---HHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCC
Confidence            999997743222   22222111000                        001112234578899999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      ++++++.
T Consensus       272 ~~~~~l~  278 (282)
T cd07829         272 SAKEALK  278 (282)
T ss_pred             CHHHHhh
Confidence            9999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.6e-34  Score=224.78  Aligned_cols=208  Identities=22%  Similarity=0.348  Sum_probs=173.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|++++.++. ||+++++++++..+...++++|++ +++|.+++.. ...+++..+..++.|++.|+.+||+.|
T Consensus        42 ~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~  119 (254)
T cd06627          42 ALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK-FGPFPESLVAVYVYQVLQGLAYLHEQG  119 (254)
T ss_pred             HHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            4467899999999998 999999999999989999999999 8999999885 467999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.........   .....++..|++||...+...+.++|+||+|+++++|+
T Consensus       120 i~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~  193 (254)
T cd06627         120 VIHRDIKAANILTTKD---GVVKLADFGVATKLNDVSKD---DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELL  193 (254)
T ss_pred             cccCCCCHHHEEECCC---CCEEEeccccceecCCCccc---ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHH
Confidence            9999999999999765   88999999998876544321   13456788999999998888889999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.....   .........    .........++..+.+++.+||..+|++||++.+++.
T Consensus       194 ~g~~p~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         194 TGNPPYYDLNP---MAALFRIVQ----DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             hCCCCCCCccH---HHHHHHHhc----cCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            99999986432   111111111    1222334678899999999999999999999998864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.4e-34  Score=225.15  Aligned_cols=203  Identities=23%  Similarity=0.282  Sum_probs=170.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+..|+.+++++. ||+|+++++.+..+...+++||++ +++|.+++.. ...+++..+..++.|++.|+.++|+.++
T Consensus        37 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lh~~~~  114 (250)
T cd05123          37 VEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK-EGRFSEERARFYAAEIVLALEYLHSLGI  114 (250)
T ss_pred             HHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            447889999999998 999999999999999999999999 9999999984 4468999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+........   ......++..|++||...+...+.++|+||||+++|++++
T Consensus       115 ~H~~l~p~ni~~~~~---~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~  188 (250)
T cd05123         115 IYRDLKPENILLDAD---GHIKLTDFGLAKELSSEGS---RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLT  188 (250)
T ss_pred             eecCCCcceEEEcCC---CcEEEeecCcceecccCCC---cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHH
Confidence            999999999999766   8899999999876544321   1244567889999999988888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGK  228 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~  228 (257)
                      |..||.....   ......+...     ....+...+..+.+++++||..||++||++.+
T Consensus       189 g~~p~~~~~~---~~~~~~~~~~-----~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         189 GKPPFYAEDR---KEIYEKILKD-----PLRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             CCCCCCCCCH---HHHHHHHhcC-----CCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            9999976432   3333333321     22233567899999999999999999999944

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=5.5e-34  Score=229.12  Aligned_cols=210  Identities=24%  Similarity=0.347  Sum_probs=173.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++.+||||+++++++..++..+++||++ +++|.+++.. ...++...+..++.|++.||.+||+.|+
T Consensus        45 ~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~~~l~~Lh~~~~  123 (280)
T cd05581          45 VKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK-YGSLDEKCTRFYAAEILLALEYLHSKGI  123 (280)
T ss_pred             HHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3568889999999987999999999999989999999999 9999999985 4479999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-----------------CCccCCCCcccccChhHhcCCCCC
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-----------------IRTRGLTGTARYASVNAHQWLDQS  151 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~aPE~~~~~~~~  151 (257)
                      +|+||+|+||+++.+   +.++++|||.+..........                 .......++..|+|||...+...+
T Consensus       124 ~H~dl~~~ni~i~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~  200 (280)
T cd05581         124 IHRDLKPENILLDKD---MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAG  200 (280)
T ss_pred             eecCCCHHHeEECCC---CCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCC
Confidence            999999999999766   889999999987654432210                 111334578899999999888889


Q ss_pred             CcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh----H
Q psy2769         152 PRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY----G  227 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~----~  227 (257)
                      .++|+||||++++++++|..||....   .......+......     .+..+|+.+.+++.+||+.+|++||++    +
T Consensus       201 ~~~Di~slG~~l~~l~~g~~p~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~  272 (280)
T cd05581         201 KSSDLWALGCIIYQMLTGKPPFRGSN---EYLTFQKILKLEYS-----FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYD  272 (280)
T ss_pred             hhhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHHHHHhcCCC-----CCCccCHHHHHHHHHHhcCCHhhCCCcccCHH
Confidence            99999999999999999999999753   22223333322222     225678999999999999999999999    6


Q ss_pred             HHHH
Q psy2769         228 KLRD  231 (257)
Q Consensus       228 ~~~~  231 (257)
                      +++.
T Consensus       273 ~ll~  276 (280)
T cd05581         273 ELKA  276 (280)
T ss_pred             HHhc
Confidence            6653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.4e-33  Score=232.10  Aligned_cols=222  Identities=15%  Similarity=0.159  Sum_probs=167.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++.+. ||||+++++++..+...++++||+ ++++.+++... ...+++..+..++.|++.||.|||+.|
T Consensus        43 ~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  121 (328)
T cd08226          43 LKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG  121 (328)
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            467888999998888 999999999999999999999999 89999998854 346899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC----CccCCCCcccccChhHhcCC--CCCCcchHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI----RTRGLTGTARYASVNAHQWL--DQSPRDDLEALCY  161 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slg~  161 (257)
                      ++|+||||+||+++.+   +.++++||+.+...........    ......++..|+|||++.+.  .++.++||||+|+
T Consensus       122 ivHrDlkp~Nill~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~  198 (328)
T cd08226         122 YIHRNIKASHILISGD---GLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGI  198 (328)
T ss_pred             eecCCCCHHHEEEeCC---CcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHH
Confidence            9999999999999866   8899999976433222111100    00112345679999999764  4688999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHh--------------------------------------h----CChhh
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKL--------------------------------------T----MTPEA  199 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------------------~----~~~~~  199 (257)
                      ++|+|++|..||........   .........                                      .    .....
T Consensus       199 ~l~el~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (328)
T cd08226         199 TACELATGRVPFQDMLRTQM---LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTP  275 (328)
T ss_pred             HHHHHHhCCCCCCCcChHHH---HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccch
Confidence            99999999999987532211   111000000                                      0    00001


Q ss_pred             hhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         200 ICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       200 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      ....+++.+.+++++||..||++|||++++++  .++...+
T Consensus       276 ~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         276 SSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             hhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence            12346778999999999999999999999964  5555544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.1e-33  Score=224.61  Aligned_cols=206  Identities=18%  Similarity=0.184  Sum_probs=171.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+|+.+++.+. ||||+++.+++......++++||+ +++|.+++...   ...+++..+..++.|++.||++||+
T Consensus        43 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~  121 (256)
T cd08530          43 REDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE  121 (256)
T ss_pred             HHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            456788999999998 999999999999889999999999 99999998753   3568999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||+|+||+++.+   +.++++|||.+......     ......++..|++||.+.+...+.++|+||+|+++++
T Consensus       122 ~~i~h~~l~~~ni~~~~~---~~~kl~d~g~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~  193 (256)
T cd08530         122 QKILHRDLKSANILLVAN---DLVKIGDLGISKVLKKN-----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYE  193 (256)
T ss_pred             CCcccCCCCcceEEEecC---CcEEEeeccchhhhccC-----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHH
Confidence            999999999999999865   78999999998765443     1133467889999999998888999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +++|..||.....   .+....+.    ....+.....++..+.+++.+||..+|++||++.+++.
T Consensus       194 l~~g~~p~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         194 MATFAPPFEARSM---QDLRYKVQ----RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHhCCCCCCCCCH---HHHHHHHh----cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            9999999987432   22222222    12222333568889999999999999999999998864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=2e-33  Score=231.49  Aligned_cols=218  Identities=17%  Similarity=0.197  Sum_probs=166.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      .+.+.+|+.+++++.+||||+++++.+..    ....++++++++++|.+.+.. ...+++..+..++.|++.||.+||+
T Consensus        45 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~  123 (332)
T cd07857          45 AKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHS  123 (332)
T ss_pred             HHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            45678899999999879999999987543    245788999998899998873 5679999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-CCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTL  163 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l  163 (257)
                      .|++|+||||+||+++.+   +.++|+|||.+......... ........++..|+|||.+.+ ..++.++|+||+|+++
T Consensus       124 ~givH~dlkp~Nili~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l  200 (332)
T cd07857         124 ANVLHRDLKPGNLLVNAD---CELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCIL  200 (332)
T ss_pred             CCcccCCCCHHHeEEcCC---CCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHH
Confidence            999999999999999766   88999999998765433211 111134568899999998866 4578999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHH------------HHHHHHHH-----------hhCChhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         164 VYFLRGKLPWQSIKSDNEETR------------MQRVTEMK-----------LTMTPEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~------------~~~~~~~~-----------~~~~~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      +++++|.+||...........            +..+....           ............+..+.+++.+||+.||
T Consensus       201 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  280 (332)
T cd07857         201 AELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDP  280 (332)
T ss_pred             HHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCc
Confidence            999999999986432111110            00000000           0011112234567889999999999999


Q ss_pred             CCCCChHHHHH
Q psy2769         221 SEEPNYGKLRD  231 (257)
Q Consensus       221 ~~Rp~~~~~~~  231 (257)
                      ++||++++++.
T Consensus       281 ~~R~t~~~ll~  291 (332)
T cd07857         281 TKRISVEEALE  291 (332)
T ss_pred             ccCCCHHHHhc
Confidence            99999999865

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=8.1e-34  Score=234.27  Aligned_cols=222  Identities=15%  Similarity=0.150  Sum_probs=170.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-----CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ...+.+|+.++..+. ||||+++++++...     ...++++||++++|.+++.. ...+++..+..++.|++.||.+||
T Consensus        48 ~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH  125 (337)
T cd07858          48 AKRTLREIKLLRHLD-HENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIH  125 (337)
T ss_pred             hHHHHHHHHHHHhcC-CCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence            346778999999997 99999999987643     34799999998899988874 567999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTL  163 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l  163 (257)
                      +.|++|+||+|+||+++.+   +.++|+|||++.......   .......++..|+|||.+.+ ..++.++|+||||+++
T Consensus       126 ~~~i~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  199 (337)
T cd07858         126 SANVLHRDLKPSNLLLNAN---CDLKICDFGLARTTSEKG---DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIF  199 (337)
T ss_pred             hCCEecCCCCHHHEEEcCC---CCEEECcCccccccCCCc---ccccccccccCccChHHHhcCCCCCCcccHHHHHHHH
Confidence            9999999999999999766   889999999987653321   11134467889999998865 4578999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHH--------------------HHh---hCChhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTE--------------------MKL---TMTPEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      |+|++|..||.+.........+.....                    ...   ........+.+++.+.++|++||+.+|
T Consensus       200 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P  279 (337)
T cd07858         200 AELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDP  279 (337)
T ss_pred             HHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCCh
Confidence            999999999976432111111111000                    000   001112235688999999999999999


Q ss_pred             CCCCChHHHHHH--HHHHHHh
Q psy2769         221 SEEPNYGKLRDS--FRNLLEN  239 (257)
Q Consensus       221 ~~Rp~~~~~~~~--l~~~~~~  239 (257)
                      ++||+++++++-  ++.+...
T Consensus       280 ~~Rps~~ell~h~~~~~~~~~  300 (337)
T cd07858         280 SKRITVEEALAHPYLASLHDP  300 (337)
T ss_pred             hhccCHHHHHcCcchhhhcCc
Confidence            999999999874  6655443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=7.5e-34  Score=229.14  Aligned_cols=213  Identities=19%  Similarity=0.215  Sum_probs=167.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++.+. |||++++++++...  +..++|+||++++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        42 ~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~  120 (287)
T cd07840          42 PITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG  120 (287)
T ss_pred             hHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            346788999999998 99999999999887  789999999977999988754467999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.........  ......++..|+|||.+.+. .++.++||||||+++|+|
T Consensus       121 ~~h~dl~p~nil~~~~---~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el  195 (287)
T cd07840         121 ILHRDIKGSNILINND---GVLKLADFGLARPYTKRNSA--DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAEL  195 (287)
T ss_pred             ceeccCcHHHeEEcCC---CCEEEccccceeeccCCCcc--cccccccccccCCceeeEccccCChHHHHHHHHHHHHHH
Confidence            9999999999999866   89999999998766543211  11334567889999987654 568899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCC-------------------------hhhhhcC-CcHHHHHHHHHHhcCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMT-------------------------PEAICEG-TPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~-~~~~~~~li~~~l~~~p  220 (257)
                      ++|..||........   ...+........                         ....... +++.+.+++++||..+|
T Consensus       196 ~t~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P  272 (287)
T cd07840         196 FLGKPIFQGSTELEQ---LEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDP  272 (287)
T ss_pred             HhCCCCCCCCChHHH---HHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCCh
Confidence            999999987543222   122211100000                         0011122 38889999999999999


Q ss_pred             CCCCChHHHHH
Q psy2769         221 SEEPNYGKLRD  231 (257)
Q Consensus       221 ~~Rp~~~~~~~  231 (257)
                      ++||++.++++
T Consensus       273 ~~Rp~~~~~l~  283 (287)
T cd07840         273 KKRISADQALQ  283 (287)
T ss_pred             hhCcCHHHHhh
Confidence            99999998875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.2e-33  Score=233.72  Aligned_cols=217  Identities=17%  Similarity=0.165  Sum_probs=163.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--------------CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--------------DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQ   75 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--------------~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~   75 (257)
                      .+.+.+|+.++++++ ||||+++++.+...              ...++++||++++|.+.+.  ...+++..+..++.|
T Consensus        46 ~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~q  122 (342)
T cd07854          46 VKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQ  122 (342)
T ss_pred             HHHHHHHHHHHHhcC-CCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHH
Confidence            456888999999997 99999999876543              3578999999779988876  457899999999999


Q ss_pred             HHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcc
Q psy2769          76 MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRD  154 (257)
Q Consensus        76 i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~  154 (257)
                      ++.||.+||+.|++|+||+|+||+++.+  ++.++++|||.+.................++..|+|||.+.+ ..++.++
T Consensus       123 i~~aL~~LH~~givH~dikp~Nili~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  200 (342)
T cd07854         123 LLRGLKYIHSANVLHRDLKPANVFINTE--DLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAI  200 (342)
T ss_pred             HHHHHHHHHhCCcccCCCCHHHEEEcCC--CceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchh
Confidence            9999999999999999999999999743  267899999998765332211111123357889999998754 4578899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH----------------HHH------HHhhCChhhhhcCCcHHHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQR----------------VTE------MKLTMTPEAICEGTPPEFAEFL  212 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~----------------~~~------~~~~~~~~~~~~~~~~~~~~li  212 (257)
                      ||||||+++|+|++|..||..............                ...      .............++..+.+++
T Consensus       201 DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  280 (342)
T cd07854         201 DMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFL  280 (342)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHH
Confidence            999999999999999999976432211111000                000      0000111222346788999999


Q ss_pred             HHHhcCCCCCCCChHHHHH
Q psy2769         213 RYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       213 ~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .+||..||.+||++++++.
T Consensus       281 ~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         281 EQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HHHhCCCchhccCHHHHhC
Confidence            9999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0612|consensus

Probab=100.00  E-value=2.8e-34  Score=251.87  Aligned_cols=224  Identities=20%  Similarity=0.223  Sum_probs=184.7

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ....-|..|-.++..-. .+=|++++-.|.+..++|+||||+ ||+|..++.... +++++-+..++..|+.||.-+|+.
T Consensus       117 ~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~m  194 (1317)
T KOG0612|consen  117 AETACFREERDIMVFGN-SEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSM  194 (1317)
T ss_pred             hhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhc
Confidence            34445677777777665 888999999999999999999999 999999999766 899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----CCCCCcchHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----LDQSPRDDLEALCY  161 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~Dv~slg~  161 (257)
                      |+|||||||+|||++.+   |.++|.|||.+......+..  .....+|||.|.|||++..     +.|+..+|.||+||
T Consensus       195 gyVHRDiKPDNvLld~~---GHikLADFGsClkm~~dG~V--~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV  269 (1317)
T KOG0612|consen  195 GYVHRDIKPDNVLLDKS---GHIKLADFGSCLKMDADGTV--RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGV  269 (1317)
T ss_pred             cceeccCCcceeEeccc---CcEeeccchhHHhcCCCCcE--EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHH
Confidence            99999999999999877   99999999998776644332  2267799999999999953     35789999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC---hHHHHHHHHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN---YGKLRDSFRNLLE  238 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~~~~~l~~~~~  238 (257)
                      ++|||+.|..||+.   +...+.+.+|..-+-.+.-|.. ..+|+...+||.+++ -+|+.|..   ++++.        
T Consensus       270 ~~YEMlyG~TPFYa---dslveTY~KIm~hk~~l~FP~~-~~VSeeakdLI~~ll-~~~e~RLgrngiedik--------  336 (1317)
T KOG0612|consen  270 FMYEMLYGETPFYA---DSLVETYGKIMNHKESLSFPDE-TDVSEEAKDLIEALL-CDREVRLGRNGIEDIK--------  336 (1317)
T ss_pred             HHHHHHcCCCcchH---HHHHHHHHHHhchhhhcCCCcc-cccCHHHHHHHHHHh-cChhhhcccccHHHHH--------
Confidence            99999999999998   5667777777666444433322 459999999999999 78888876   55442        


Q ss_pred             hccccCCCCCcccccc
Q psy2769         239 NKERCEFDLRYDWTLL  254 (257)
Q Consensus       239 ~~~~~~~~~~~~~~~~  254 (257)
                      +   ..|....||..|
T Consensus       337 ~---HpFF~g~~W~~i  349 (1317)
T KOG0612|consen  337 N---HPFFEGIDWDNI  349 (1317)
T ss_pred             h---CccccCCChhhh
Confidence            2   347777888776

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=1.6e-33  Score=224.23  Aligned_cols=205  Identities=19%  Similarity=0.217  Sum_probs=168.1

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+..|+.++..+. ||||+++++++......++++||+ +++|.+++...   ...+++..+..++.|++.||.+||+.|
T Consensus        48 ~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (260)
T cd08222          48 QANQEAQLLSKLD-HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR  126 (260)
T ss_pred             HHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            4667899999998 999999999999888999999999 99999988642   457899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.    +.++++|||.+........   ......+++.|+|||...+..++.++|+||+|+++|+|+
T Consensus       127 i~h~~l~~~nili~~----~~~~l~d~g~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~  199 (260)
T cd08222         127 ILHRDLKAKNIFLKN----NLLKIGDFGVSRLLMGSCD---LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMC  199 (260)
T ss_pred             ccccCCChhheEeec----CCEeecccCceeecCCCcc---cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence            999999999999963    4699999998876543321   113456788999999998888889999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||...   ........+..    ...+.....++..+.++|.+||..+|++||++.++++
T Consensus       200 ~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         200 CLAHAFEGQ---NFLSVVLRIVE----GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             hCCCCCCCc---cHHHHHHHHHc----CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            999999753   22222222222    2222333578889999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=2.1e-33  Score=229.23  Aligned_cols=217  Identities=17%  Similarity=0.163  Sum_probs=164.1

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeC--------CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSG--------DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--------~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..+.+|+.+++.+. ||||+++++++...        ..++++++|+++++.+.+......+++..+..++.|++.||.+
T Consensus        52 ~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~  130 (311)
T cd07866          52 ITALREIKILKKLK-HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINY  130 (311)
T ss_pred             hhHHHHHHHHHhcC-CCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence            45788999999998 99999999877432        3469999999888888887555679999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC--------CccCCCCcccccChhHhcCC-CCCCc
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI--------RTRGLTGTARYASVNAHQWL-DQSPR  153 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~~-~~~~~  153 (257)
                      ||+.|++|+||+|+||+++.+   +.++|+|||++...........        ......+++.|+|||.+.+. .++.+
T Consensus       131 lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  207 (311)
T cd07866         131 LHENHILHRDIKAANILIDNQ---GILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTA  207 (311)
T ss_pred             HHhCCeecCCCCHHHEEECCC---CCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCch
Confidence            999999999999999999766   8999999998875543321111        01223467889999988654 46889


Q ss_pred             chHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHH----------------------hhCChhhhhcCCcHHHHHH
Q psy2769         154 DDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK----------------------LTMTPEAICEGTPPEFAEF  211 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l  211 (257)
                      +||||+|+++|+|++|.+||...........+.......                      .+.........+++.+.++
T Consensus       208 ~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (311)
T cd07866         208 VDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDL  287 (311)
T ss_pred             hHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHH
Confidence            999999999999999999998644332222211111000                      0000111123455789999


Q ss_pred             HHHHhcCCCCCCCChHHHHH
Q psy2769         212 LRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       212 i~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.+||..+|.+|||+.+++.
T Consensus       288 i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         288 LSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             HHHHcccCcccCcCHHHHhc
Confidence            99999999999999988864

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2e-33  Score=226.35  Aligned_cols=213  Identities=19%  Similarity=0.233  Sum_probs=166.2

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      ...+|+..+.++.+||+++++++++..++..++||||++++|.+.+.... ..++...+..++.|++.+|.+||+.|++|
T Consensus        43 ~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H  122 (283)
T cd07830          43 MNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFH  122 (283)
T ss_pred             HHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            34568999999988999999999999999999999999889999888543 47899999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHhC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      +||+|+||+++.+   +.++|+|||.+........    .....++..|+|||.+.+ ...+.++|+||||+++++|++|
T Consensus       123 ~dl~~~ni~i~~~---~~~~l~d~~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g  195 (283)
T cd07830         123 RDLKPENLLVSGP---EVVKIADFGLAREIRSRPP----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTL  195 (283)
T ss_pred             CCCChhhEEEcCC---CCEEEeecccceeccCCCC----cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhC
Confidence            9999999999866   8999999999876543211    133567889999998754 4568899999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHH------------------H----hhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEM------------------K----LTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~------------------~----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      ..||......+...........                  .    ............+..+.+++++||..+|++||+++
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  275 (283)
T cd07830         196 RPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTAS  275 (283)
T ss_pred             CCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHH
Confidence            9999765332221111110000                  0    00001111223468899999999999999999999


Q ss_pred             HHHH
Q psy2769         228 KLRD  231 (257)
Q Consensus       228 ~~~~  231 (257)
                      +++.
T Consensus       276 ei~~  279 (283)
T cd07830         276 QALQ  279 (283)
T ss_pred             HHhh
Confidence            8864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.9e-33  Score=232.63  Aligned_cols=207  Identities=19%  Similarity=0.276  Sum_probs=165.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCc------cEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDY------NILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~------~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.+++++. |||++++.+++.....      .++|+|+++++|.+++.  ...+++..+..++.|++.||.+|
T Consensus        58 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~ql~~aL~~L  134 (343)
T cd07851          58 AKRTYRELRLLKHMD-HENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVK--CQKLSDDHIQFLVYQILRGLKYI  134 (343)
T ss_pred             HHHHHHHHHHHHhcc-CCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            345778999999997 9999999988765544      89999999999999988  46799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~  162 (257)
                      |+.|++|+||+|+||+++.+   +.++|+|||.+......      .....++..|+|||.+.+. ..+.++||||+|++
T Consensus       135 H~~gi~H~dlkp~Nill~~~---~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~  205 (343)
T cd07851         135 HSAGIIHRDLKPSNIAVNED---CELKILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  205 (343)
T ss_pred             HHCCeecCCCCHHHeEECCC---CCEEEcccccccccccc------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHH
Confidence            99999999999999999766   88999999998765332      1345678899999998653 56889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh-----------------------C---ChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT-----------------------M---TPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~---~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|++++|..||......   ..+..+......                       .   ........+++.+.+++.+||
T Consensus       206 l~elltg~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l  282 (343)
T cd07851         206 MAELLTGKTLFPGSDHI---DQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKML  282 (343)
T ss_pred             HHHHHhCCCCCCCCChH---HHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhC
Confidence            99999999999864332   222222111000                       0   001122356889999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      +.+|++|||+.+++.
T Consensus       283 ~~~P~~Rpt~~ell~  297 (343)
T cd07851         283 VLDPDKRITAAEALA  297 (343)
T ss_pred             CCChhhCCCHHHHhc
Confidence            999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.7e-33  Score=228.92  Aligned_cols=214  Identities=19%  Similarity=0.254  Sum_probs=167.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.+++.+. ||||+++++++..+.      ..++|+++++++|.+++.  ...+++..+..++.|++.||.+|
T Consensus        58 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~L  134 (343)
T cd07880          58 AKRAYRELRLLKHMK-HENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYI  134 (343)
T ss_pred             HHHHHHHHHHHHhcC-CCCccceeeeecCCccccccceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            346789999999998 999999999887543      358999999889998887  46799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      |+.|++|+||+|+||+++.+   +.++++|||.+......      .....+++.|+|||.+.+ ...+.++|+||+|++
T Consensus       135 H~~gi~H~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~l  205 (343)
T cd07880         135 HAAGIIHRDLKPGNLAVNED---CELKILDFGLARQTDSE------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCI  205 (343)
T ss_pred             HhCCeecCCCCHHHEEEcCC---CCEEEeecccccccccC------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHH
Confidence            99999999999999999765   88999999998754321      133467889999999876 357889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh-----------------------C---ChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT-----------------------M---TPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~---~~~~~~~~~~~~~~~li~~~l  216 (257)
                      ++++++|..||.......   ....+......                       .   ........+++.+.++|.+|+
T Consensus       206 l~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  282 (343)
T cd07880         206 MAEMLTGKPLFKGHDHLD---QLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKML  282 (343)
T ss_pred             HHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHc
Confidence            999999999998643221   11111110000                       0   011223467888999999999


Q ss_pred             cCCCCCCCChHHHH--HHHHHHHH
Q psy2769         217 GLAFSEEPNYGKLR--DSFRNLLE  238 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~--~~l~~~~~  238 (257)
                      +.||++||++.+++  ..++.+..
T Consensus       283 ~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         283 VLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             CCChhhCCCHHHHhcCccHhhhcC
Confidence            99999999999987  35555433

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0690|consensus

Probab=100.00  E-value=1.9e-34  Score=223.46  Aligned_cols=209  Identities=19%  Similarity=0.214  Sum_probs=177.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      +....-|-++++..+ ||++..+.-.|++.+++|+||||. ||.|.--+. +.+.+++..+..+..+|+.||.|||+++|
T Consensus       212 VAHTlTE~RVL~~~~-HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLs-rer~FsE~RtRFYGaEIvsAL~YLHs~~i  289 (516)
T KOG0690|consen  212 VAHTLTENRVLQNCR-HPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLS-RERVFSEDRTRFYGAEIVSALGYLHSRNI  289 (516)
T ss_pred             hhhhhhHHHHHHhcc-CcHHHHhhhhhccCceEEEEEEEccCceEeeehh-hhhcccchhhhhhhHHHHHHhhhhhhCCe
Confidence            444566788888888 999999999999999999999999 999887776 36789999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |.||+|.+|.++++|   |.+||+|||++..-...   ......+.|||.|+|||++....|+...|.|.+||++|||++
T Consensus       290 vYRDlKLENLlLDkD---GHIKitDFGLCKE~I~~---g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmC  363 (516)
T KOG0690|consen  290 VYRDLKLENLLLDKD---GHIKITDFGLCKEEIKY---GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMC  363 (516)
T ss_pred             eeeechhhhheeccC---CceEeeecccchhcccc---cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHh
Confidence            999999999999888   99999999998754332   223378899999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC--ChHHHHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP--NYGKLRDSFR  234 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp--~~~~~~~~l~  234 (257)
                      |+.||.+.   +..+...-|......++     ..++++...|+..+|..||.+|.  ..++..+.++
T Consensus       364 GRLPFyn~---dh~kLFeLIl~ed~kFP-----r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  364 GRLPFYNK---DHEKLFELILMEDLKFP-----RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             ccCccccc---chhHHHHHHHhhhccCC-----ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence            99999984   44444444544444444     78999999999999999999997  3566655544

>KOG0696|consensus

Probab=100.00  E-value=2.3e-34  Score=229.34  Aligned_cols=224  Identities=20%  Similarity=0.262  Sum_probs=185.2

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR   91 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~   91 (257)
                      -..|-++|.-...-|++++++.+|++-+++|+||||+ ||+|---++. -+++.+..+..++.+|+-||.+||++||+.|
T Consensus       396 tm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ-~GkFKEp~AvFYAaEiaigLFFLh~kgIiYR  474 (683)
T KOG0696|consen  396 TMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYR  474 (683)
T ss_pred             eehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHH-hcccCCchhhhhhHHHHHHhhhhhcCCeeee
Confidence            4455556555555688999999999999999999999 9999887774 5678999999999999999999999999999


Q ss_pred             CCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCC
Q psy2769          92 DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKL  171 (257)
Q Consensus        92 dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~  171 (257)
                      |||.+||+++.+   |.+||.|||++.....   ....+.++.||+.|+|||++...+|+..+|.||+||++|||+.|++
T Consensus       475 DLKLDNvmLd~e---GHiKi~DFGmcKEni~---~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQp  548 (683)
T KOG0696|consen  475 DLKLDNVMLDSE---GHIKIADFGMCKENIF---DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP  548 (683)
T ss_pred             eccccceEeccC---CceEeeeccccccccc---CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCC
Confidence            999999999877   9999999999865332   2333478899999999999999999999999999999999999999


Q ss_pred             CCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCCCCccc
Q psy2769         172 PWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDW  251 (257)
Q Consensus       172 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~~~~~~  251 (257)
                      ||.+   .+..+..+.|..-....+     ..+|.+..++++..|...|.+|..+.---+   +-++.+   .+-...||
T Consensus       549 PFdG---eDE~elF~aI~ehnvsyP-----KslSkEAv~ickg~ltK~P~kRLGcg~~ge---~di~~H---~FFR~iDW  614 (683)
T KOG0696|consen  549 PFDG---EDEDELFQAIMEHNVSYP-----KSLSKEAVAICKGLLTKHPGKRLGCGPEGE---RDIREH---PFFRRIDW  614 (683)
T ss_pred             CCCC---CCHHHHHHHHHHccCcCc-----ccccHHHHHHHHHHhhcCCccccCCCCccc---cchhhC---cchhhccH
Confidence            9998   566666677766554444     678999999999999999999975422111   223333   37788999


Q ss_pred             cccccC
Q psy2769         252 TLLERK  257 (257)
Q Consensus       252 ~~~~~~  257 (257)
                      +.||++
T Consensus       615 ek~E~~  620 (683)
T KOG0696|consen  615 EKLERR  620 (683)
T ss_pred             HHHhhc
Confidence            999874

>KOG0614|consensus

Probab=100.00  E-value=1.6e-34  Score=235.15  Aligned_cols=224  Identities=20%  Similarity=0.248  Sum_probs=187.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|-+++..+. +|+|+++|-.|.++...|++||.| ||.|+..++. .+.|+..++..++.-++.|+.|||++||
T Consensus       464 qeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~i  541 (732)
T KOG0614|consen  464 QEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGI  541 (732)
T ss_pred             HHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhhHHhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCc
Confidence            457889999999999 999999999999999999999999 9999999996 6689999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +.|||||+|++++.+   |-+||.|||++..+..+.    .++++.||+.|.|||++.+..-+..+|.||||++++||++
T Consensus       542 IYRDLKPENllLd~~---Gy~KLVDFGFAKki~~g~----KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~  614 (732)
T KOG0614|consen  542 IYRDLKPENLLLDNR---GYLKLVDFGFAKKIGSGR----KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLT  614 (732)
T ss_pred             eeccCChhheeeccC---CceEEeehhhHHHhccCC----ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHc
Confidence            999999999999876   999999999999886653    4488999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh-HHHHHHHHHHHHhccccCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY-GKLRDSFRNLLENKERCEFDL  247 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-~~~~~~l~~~~~~~~~~~~~~  247 (257)
                      |.+||.+.++   ...+..|.++.....   ++..++....++|+++...+|.+|.-. ..=+.-+++-..=.+      
T Consensus       615 G~pPFs~~dp---mktYn~ILkGid~i~---~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g------  682 (732)
T KOG0614|consen  615 GSPPFSGVDP---MKTYNLILKGIDKIE---FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG------  682 (732)
T ss_pred             CCCCCCCCch---HHHHHHHHhhhhhhh---cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc------
Confidence            9999999544   344444444332222   226788899999999999999999852 222333333333333      


Q ss_pred             Cccccccc
Q psy2769         248 RYDWTLLE  255 (257)
Q Consensus       248 ~~~~~~~~  255 (257)
                       +||+-|.
T Consensus       683 -fdweglr  689 (732)
T KOG0614|consen  683 -FDWEGLR  689 (732)
T ss_pred             -CChhhhh
Confidence             7887664

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.3e-33  Score=221.93  Aligned_cols=192  Identities=23%  Similarity=0.202  Sum_probs=155.2

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR   91 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~   91 (257)
                      +.+|...+.... ||||+++++++......+++|||+ +++|.+++.. ...+++..+..++.|++.||.++|+.|++|+
T Consensus        32 ~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~  109 (237)
T cd05576          32 YSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCR  109 (237)
T ss_pred             hhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeecc
Confidence            345555555555 899999999999999999999999 8999999875 4468999999999999999999999999999


Q ss_pred             CCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCC
Q psy2769          92 DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKL  171 (257)
Q Consensus        92 dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~  171 (257)
                      ||||+||+++.+   +.++++|||.+.......      ....++..|+|||...+..++.++|+||+|+++|+|++|..
T Consensus       110 dlkp~Nil~~~~---~~~~l~df~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~  180 (237)
T cd05576         110 DLNPNNILLDDR---GHIQLTYFSRWSEVEDSC------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKT  180 (237)
T ss_pred             CCCHHHEEEcCC---CCEEEecccchhcccccc------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcc
Confidence            999999999866   889999999876543321      23345678999999988888999999999999999999998


Q ss_pred             CCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         172 PWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       172 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      |+.......        .    .......+..+++.+.+++.+||+.||++||++.
T Consensus       181 ~~~~~~~~~--------~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         181 LVECHPSGI--------N----THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             hhhcCchhc--------c----cccccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence            876432110        0    0001112256788999999999999999999873

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0671|consensus

Probab=100.00  E-value=1.8e-34  Score=227.26  Aligned_cols=218  Identities=17%  Similarity=0.194  Sum_probs=174.6

Q ss_pred             CCcccccHHHHHHHHHhcCC-C----CCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGA-P----GVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~-~----~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ...++..+-|+++++++..+ |    -++++.++|...++.|+|+|.+|.|+++++..+ -.+++..++..++.|++.++
T Consensus       126 ~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv  205 (415)
T KOG0671|consen  126 DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESV  205 (415)
T ss_pred             HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHH
Confidence            44566778899999999533 2    378888999999999999999999999999964 45799999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccC-----------------CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChh
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRE-----------------NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVN  143 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~-----------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE  143 (257)
                      ++||+.+++|.||||+||++.+..                 .+..++++|||.+......      ....+.|..|.|||
T Consensus       206 ~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~------hs~iVsTRHYRAPE  279 (415)
T KOG0671|consen  206 AFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH------HSTIVSTRHYRAPE  279 (415)
T ss_pred             HHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC------cceeeeccccCCch
Confidence            999999999999999999998642                 1346899999999764332      15668899999999


Q ss_pred             HhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC-----------------hh--------
Q psy2769         144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-----------------PE--------  198 (257)
Q Consensus       144 ~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~--------  198 (257)
                      ++.+.+++.++||||+|||++|+++|...|+...+.+...+++++.+. .+..                 ++        
T Consensus       280 ViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp-~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~  358 (415)
T KOG0671|consen  280 VILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGP-IPSRMIKKTRKEKYFRRGRLDWPEVSSKGKS  358 (415)
T ss_pred             heeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCC-CcHHHhhhhhhHhhhhcccccCccccccccc
Confidence            999999999999999999999999999999987766655565554331 1100                 00        


Q ss_pred             -----------hhhcCCc---HHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         199 -----------AICEGTP---PEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       199 -----------~~~~~~~---~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                                 .....-+   ..+-+|+++||..||.+|+|+.|++.
T Consensus       359 k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  359 KYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             hhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence                       0000111   24789999999999999999998864

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.4e-33  Score=230.01  Aligned_cols=207  Identities=18%  Similarity=0.270  Sum_probs=162.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.++.+++ ||||+++++++...      ...++++++++++|.+++.  ...+++..+..++.|++.||.||
T Consensus        60 ~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~L  136 (345)
T cd07877          60 AKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYI  136 (345)
T ss_pred             HHHHHHHHHHHHHcC-CCcccceeeeeeecccccccccEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            346778999999998 99999999987643      3468888888999988887  45699999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      |+.|++|+||+|+||+++.+   +.++|+|||++......      .....++..|+|||.+.+ ..++.++||||+|++
T Consensus       137 H~~~ivH~dlkp~NIll~~~---~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~i  207 (345)
T cd07877         137 HSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  207 (345)
T ss_pred             HHCCeeecCCChHHEEEcCC---CCEEEeccccccccccc------ccccccCCCccCHHHHhCccCCCchhhHHHHHHH
Confidence            99999999999999999866   88999999988653221      134567889999999876 457889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHh-----------------------hC---ChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKL-----------------------TM---TPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------------~~---~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|+|++|..||........   +..+.....                       ..   .........++.+.++|.+||
T Consensus       208 l~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  284 (345)
T cd07877         208 MAELLTGRTLFPGTDHIDQ---LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  284 (345)
T ss_pred             HHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHc
Confidence            9999999999976432221   111111100                       00   001111246788999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||.+||++.++++
T Consensus       285 ~~dp~~R~t~~e~l~  299 (345)
T cd07877         285 VLDSDKRITAAQALA  299 (345)
T ss_pred             CCChhhcCCHHHHhc
Confidence            999999999999876

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.9e-33  Score=229.58  Aligned_cols=213  Identities=18%  Similarity=0.257  Sum_probs=164.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...+.+|+.++..+. ||||+++++++....      ..+++++++..+|.+...   ..+++..+..++.|++.||++|
T Consensus        58 ~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~L  133 (342)
T cd07879          58 AKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYI  133 (342)
T ss_pred             hhHHHHHHHHHHhcC-CCCccchhheecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            345788999999997 999999999887543      458999999777766543   4689999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      |+.|++||||+|+||+++.+   +.++|+|||++......      .....++..|+|||.+.+ ..++.++|+||||++
T Consensus       134 H~~~i~H~dlkp~NIll~~~---~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvi  204 (342)
T cd07879         134 HSAGIIHRDLKPGNLAVNED---CELKILDFGLARHADAE------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCI  204 (342)
T ss_pred             HHCCcccCCCCHHHEEECCC---CCEEEeeCCCCcCCCCC------CCCceeeecccChhhhcCccccCchHHHHHHHHH
Confidence            99999999999999999866   89999999998653221      133457888999999876 457889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHH-----------------------hhC---ChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMK-----------------------LTM---TPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------~~~---~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|+|++|+.||.+.....   .+..+....                       ...   ......+..++.+.++|.+||
T Consensus       205 l~el~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  281 (342)
T cd07879         205 MAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKML  281 (342)
T ss_pred             HHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHc
Confidence            999999999998643221   111111100                       000   011112457788999999999


Q ss_pred             cCCCCCCCChHHHHH--HHHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      +.||.+||++++++.  .++.+..
T Consensus       282 ~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         282 ELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             CCChhhCcCHHHHhcCcchhhccc
Confidence            999999999999984  5666544

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG2052|consensus

Probab=100.00  E-value=6.8e-33  Score=222.26  Aligned_cols=234  Identities=22%  Similarity=0.299  Sum_probs=182.6

Q ss_pred             CccCCCCCcccccHHHHHHHHH--hcCCCCCcEEEeeeeeCC----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEK--LHGAPGVPHVMGYGTSGD----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLA   73 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~--l~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~   73 (257)
                      ||+++.... ....+|.+++++  |+ |+||+.+++.-..+.    .+++|++|. .|||+|++.  ...++.+...+++
T Consensus       239 VKiF~srdE-~SWfrEtEIYqTvmLR-HENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~La  314 (513)
T KOG2052|consen  239 VKIFSSRDE-RSWFRETEIYQTVMLR-HENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLA  314 (513)
T ss_pred             EEEecccch-hhhhhHHHHHHHHHhc-cchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHH
Confidence            466666655 457889999988  45 999999998765443    589999999 999999999  4789999999999


Q ss_pred             HHHHHHHHHHH--------hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCC-CCCCCCccCCCCcccccChhH
Q psy2769          74 DQMISRLEHVH--------RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN-CPPRIRTRGLTGTARYASVNA  144 (257)
Q Consensus        74 ~~i~~~l~~lh--------~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~~~~~~~~~aPE~  144 (257)
                      ..++.||++||        +-.|.|||||+.||++.++   +.+-|+|+|++...... ..........+||.+|||||+
T Consensus       315 lS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn---~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEv  391 (513)
T KOG2052|consen  315 LSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEV  391 (513)
T ss_pred             HHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccC---CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHH
Confidence            99999999999        3359999999999999877   99999999999877665 334444467899999999999


Q ss_pred             hcCC------CCCCcchHHHHHHHHHHHHhC----------CCCCCCCCCccH--HHHHHHHHHHHhhCChhhhhcCCc-
Q psy2769         145 HQWL------DQSPRDDLEALCYTLVYFLRG----------KLPWQSIKSDNE--ETRMQRVTEMKLTMTPEAICEGTP-  205 (257)
Q Consensus       145 ~~~~------~~~~~~Dv~slg~~l~~l~~g----------~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-  205 (257)
                      +...      .....+||||||+++||+..+          ++||.+..+.+.  .++..-+.-.+.....+..+...| 
T Consensus       392 Ldetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~  471 (513)
T KOG2052|consen  392 LDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPA  471 (513)
T ss_pred             hhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHH
Confidence            8543      234579999999999998752          778888765543  333333333333333333333333 


Q ss_pred             -HHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         206 -PEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       206 -~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                       ..+.++++.||..+|..|-|+-.+.+.|.++.+...
T Consensus       472 l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~e  508 (513)
T KOG2052|consen  472 LRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSDE  508 (513)
T ss_pred             HHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcChh
Confidence             358889999999999999999999999999986443

>KOG0669|consensus

Probab=100.00  E-value=3.5e-33  Score=209.45  Aligned_cols=217  Identities=18%  Similarity=0.140  Sum_probs=170.1

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeee--------CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTS--------GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~--------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ....+|+.+++.|+ |+|++.++..|.+        ...+|+|+.+|..+|.-++.....+++..++.+++.+++.||.|
T Consensus        61 italreikiL~~lk-Henv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~  139 (376)
T KOG0669|consen   61 ITALREIKILQLLK-HENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYY  139 (376)
T ss_pred             HHHHHHHHHHHHhc-chhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHH
Confidence            35678999999999 9999999887753        23589999999999999999767789999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-CCCCccCCCCcccccChhHhcCC-CCCCcchHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-PRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALC  160 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg  160 (257)
                      +|+..|+|||+|+.|++|+.+   +.++|.|||+++.+..+.. ..++-..++-|..|.+||.+.+. .++++.|+|..|
T Consensus       140 iHr~kilHRDmKaaNvLIt~d---gilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAg  216 (376)
T KOG0669|consen  140 IHRNKILHRDMKAANVLITKD---GILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAG  216 (376)
T ss_pred             HHHhhHHhhcccHhhEEEcCC---ceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHH
Confidence            999999999999999999887   9999999999977665432 22222346679999999999876 579999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChh---------------------------hhhcCCcHHHHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPE---------------------------AICEGTPPEFAEFLR  213 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~  213 (257)
                      |++.+|++|.+.+.+.........+...+..--+..++                           -.+..-+++..+++.
T Consensus       217 CimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle  296 (376)
T KOG0669|consen  217 CIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLE  296 (376)
T ss_pred             HHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHH
Confidence            99999999999888754332222222211110000000                           001233457889999


Q ss_pred             HHhcCCCCCCCChHHHHH
Q psy2769         214 YCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       214 ~~l~~~p~~Rp~~~~~~~  231 (257)
                      +++..||.+|++++++++
T Consensus       297 ~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  297 KLLKLDPTKRIDADQALN  314 (376)
T ss_pred             HHhccCcccCcchHhhhc
Confidence            999999999999998865

>KOG0695|consensus

Probab=100.00  E-value=2.8e-33  Score=218.09  Aligned_cols=233  Identities=19%  Similarity=0.266  Sum_probs=188.1

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .....++-|-.++....++|+++-++.+|.+...+++|.||+ ||+|-=-++ +.+.++++.+..+..+|+.||.|||++
T Consensus       292 edidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlmfhmq-rqrklpeeharfys~ei~lal~flh~r  370 (593)
T KOG0695|consen  292 EDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ-RQRKLPEEHARFYSAEICLALNFLHER  370 (593)
T ss_pred             ccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcceeeehh-hhhcCcHHHhhhhhHHHHHHHHHHhhc
Confidence            456788889999999999999999999999999999999999 998865555 367799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+.+|+|.+|++++..   |.+||+|+|++..-..   +...+.++.|||.|.|||++.+..|....|.|+||++++||
T Consensus       371 giiyrdlkldnvlldae---ghikltdygmcke~l~---~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfem  444 (593)
T KOG0695|consen  371 GIIYRDLKLDNVLLDAE---GHIKLTDYGMCKEGLG---PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM  444 (593)
T ss_pred             CeeeeeccccceEEccC---CceeecccchhhcCCC---CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHH
Confidence            99999999999999877   9999999999865332   22334788999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCc----cH-HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         167 LRGKLPWQSIKSD----NE-ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       167 ~~g~~p~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      +.|+.||.-..-.    +. ....+-+.......+     ..++-....+++..|++||.+|....--. .+.++..   
T Consensus       445 magrspfdivgm~n~d~ntedylfqvilekqirip-----rslsvkas~vlkgflnkdp~erlgc~~~~-g~~dik~---  515 (593)
T KOG0695|consen  445 MAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIP-----RSLSVKASHVLKGFLNKDPKERLGCRPQT-GFSDIKS---  515 (593)
T ss_pred             HcCCCCcceecCCCcccchhHHHHHHHhhhccccc-----ceeehhhHHHHHHhhcCCcHHhcCCCccc-chhhhhc---
Confidence            9999999753221    22 223333333333333     55677788899999999999997543211 4444433   


Q ss_pred             ccCCCCCccccccccC
Q psy2769         242 RCEFDLRYDWTLLERK  257 (257)
Q Consensus       242 ~~~~~~~~~~~~~~~~  257 (257)
                       ..+-...||+.+|+|
T Consensus       516 -h~ffr~idwd~leqk  530 (593)
T KOG0695|consen  516 -HAFFRSIDWDLLEQK  530 (593)
T ss_pred             -chhhhhCCHHHHhhc
Confidence             335568999999997

>KOG4236|consensus

Probab=100.00  E-value=9.6e-34  Score=231.79  Aligned_cols=210  Identities=21%  Similarity=0.290  Sum_probs=178.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .-+.+++|+.+++.+. ||.|+.+...|++.+..++|||-+.|+..+.+-.. .+++++.....++.||+.||.|||-++
T Consensus       606 qesqlR~EVaILq~l~-HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn  684 (888)
T KOG4236|consen  606 QESQLRNEVAILQNLH-HPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN  684 (888)
T ss_pred             hHHHHHHHHHHHHhcC-CCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc
Confidence            3367999999999999 99999999999999999999999966666666544 678999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+|+||||+||++.+.++-.++||||||+++.++...    -....+||+.|+|||++.+..++..-|+||+|+++|--+
T Consensus       685 IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsL  760 (888)
T KOG4236|consen  685 IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSL  760 (888)
T ss_pred             eeeccCCchheeeccCCCCCceeeccccceeecchhh----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEe
Confidence            9999999999999988778899999999999875532    115678999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKL  229 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  229 (257)
                      +|..||+..  .+..+.+++    ...+.++.-+..+++...++|..+|+..-++|-+.+..
T Consensus       761 SGTFPFNEd--EdIndQIQN----AaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~  816 (888)
T KOG4236|consen  761 SGTFPFNED--EDINDQIQN----AAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKS  816 (888)
T ss_pred             cccccCCCc--cchhHHhhc----cccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhh
Confidence            999999873  333333333    33333444456789999999999999999999887654

>KOG1024|consensus

Probab=100.00  E-value=6.1e-32  Score=213.98  Aligned_cols=221  Identities=20%  Similarity=0.274  Sum_probs=181.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeee-eCCccEEEEecc-CCCHHHHHHHh-------cCCCCHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGT-SGDYNILVMELL-GPSLEDLFQYC-------SKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~-------~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ...+..|.-.+--+. |||+..+.+... +...+++++.++ -|+|..++..+       .+.++..+...++.|++.|+
T Consensus       331 v~~~L~es~lly~~s-H~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am  409 (563)
T KOG1024|consen  331 VNLLLQESMLLYGAS-HPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAM  409 (563)
T ss_pred             HHHHHHHHHHHhcCc-CCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHH
Confidence            445666776666777 999999998765 445788999999 89999999843       34577788999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .+||++|++|.||..+|++|+..   -++||+|-.+++.+-+.....-. -....+..||+||.+.+..++..+|+||||
T Consensus       410 ~hlh~~~ViHkDiAaRNCvIdd~---LqVkltDsaLSRDLFP~DYhcLG-DnEnRPvkWMslEal~n~~yssasDvWsfG  485 (563)
T KOG1024|consen  410 EHLHNHGVIHKDIAARNCVIDDQ---LQVKLTDSALSRDLFPGDYHCLG-DNENRPVKWMSLEALQNSHYSSASDVWSFG  485 (563)
T ss_pred             HHHHhcCcccchhhhhcceehhh---eeEEeccchhccccCcccccccC-CCCCCcccccCHHHHhhhhhcchhhhHHHH
Confidence            99999999999999999999755   89999999999877666555444 223467799999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         161 YTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       161 ~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      +++|||+| |+.|+...++   .+....+.++..-    ..+-+||+++..++..||+..|++||+++|+..+|.++-.+
T Consensus       486 VllWELmtlg~~PyaeIDP---fEm~~ylkdGyRl----aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q  558 (563)
T KOG1024|consen  486 VLLWELMTLGKLPYAEIDP---FEMEHYLKDGYRL----AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ  558 (563)
T ss_pred             HHHHHHHhcCCCCccccCH---HHHHHHHhcccee----cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence            99999999 9999998644   4443444333211    12267999999999999999999999999999999999877


Q ss_pred             ccc
Q psy2769         240 KER  242 (257)
Q Consensus       240 ~~~  242 (257)
                      .++
T Consensus       559 lt~  561 (563)
T KOG1024|consen  559 LTR  561 (563)
T ss_pred             Hhh
Confidence            653

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=8.4e-32  Score=211.54  Aligned_cols=209  Identities=25%  Similarity=0.276  Sum_probs=170.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+..++++. |++++++++++......++++|++ +++|.+++... ..++...+..++.+++.++.+||+.|+
T Consensus        31 ~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i  108 (244)
T smart00220       31 RERILREISILKKLK-HPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKR-GRLSEDEARFYARQILSALEYLHSNGI  108 (244)
T ss_pred             HHHHHHHHHHHHhCC-CCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHcCe
Confidence            578999999999996 999999999999888999999999 77999998853 338999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++++|||.+.......    ......++..|++||...+...+.++|+||+|++++++++
T Consensus       109 ~h~~i~~~ni~~~~~---~~~~l~d~~~~~~~~~~~----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~  181 (244)
T smart00220      109 IHRDLKPENILLDED---GHVKLADFGLARQLDPGG----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLT  181 (244)
T ss_pred             ecCCcCHHHeEECCC---CcEEEccccceeeecccc----ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999866   889999999987764432    1244567889999999988888899999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.....  ..............  .......++..+.+++.+|+..+|++||++.++++
T Consensus       182 ~~~p~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      182 GKPPFPGDDQ--LLELFKKIGKPKPP--FPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             CCCCCCCCCc--HHHHHHHHhccCCC--CccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            9999976422  22222222211111  11111128889999999999999999999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG4250|consensus

Probab=99.98  E-value=3.8e-32  Score=228.97  Aligned_cols=230  Identities=21%  Similarity=0.300  Sum_probs=177.2

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELL-GPSLEDLFQYC--SKRFSLKTVLMLADQMI   77 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~   77 (257)
                      ...+++.-+|++++++|+ |||||+.+++-++.      ....++|||| ||||..+++..  ...+++.+...++.++.
T Consensus        52 ~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~  130 (732)
T KOG4250|consen   52 LRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLV  130 (732)
T ss_pred             cchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHH
Confidence            345678889999999999 99999999976543      3678999999 99999999864  45799999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccC-CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-CCCCCCcch
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRE-NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDD  155 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-~~~~~~~~D  155 (257)
                      .||.|||+.||+||||||.||++.... ...-.||+|||.++.+..+.    .....+||+.|++||... ...++...|
T Consensus       131 ~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----~~~S~vGT~~YLhPel~E~q~~y~~tVD  206 (732)
T KOG4250|consen  131 SALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----LFTSLVGTEEYLHPELYERQKKYTATVD  206 (732)
T ss_pred             HHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC----eeeeecCchhhcChHHHhhccCcCceee
Confidence            999999999999999999999987754 33457999999998775543    236789999999999998 578899999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCCcc-HHHH-HHHHHHHHhh------------CCh-------hhhhcCCcHHHHHHHHH
Q psy2769         156 LEALCYTLVYFLRGKLPWQSIKSDN-EETR-MQRVTEMKLT------------MTP-------EAICEGTPPEFAEFLRY  214 (257)
Q Consensus       156 v~slg~~l~~l~~g~~p~~~~~~~~-~~~~-~~~~~~~~~~------------~~~-------~~~~~~~~~~~~~li~~  214 (257)
                      .|||||++|+..||..||......- ..+. ...+.+.+..            +.+       ....+.+-..+.+.+..
T Consensus       207 LWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~  286 (732)
T KOG4250|consen  207 LWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLAS  286 (732)
T ss_pred             hhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHH
Confidence            9999999999999999997654431 1111 1111111100            000       00111222346678889


Q ss_pred             HhcCCCCCCC--ChHHHHHHHHHHHHhcc
Q psy2769         215 CRGLAFSEEP--NYGKLRDSFRNLLENKE  241 (257)
Q Consensus       215 ~l~~~p~~Rp--~~~~~~~~l~~~~~~~~  241 (257)
                      +|..+|++|.  ...++-..+..+++..-
T Consensus       287 ~L~~~~~~~~~~~~~~~Fa~~~dIL~~~v  315 (732)
T KOG4250|consen  287 MLEWNPRKRGHEGFDRFFAEVDDILNLKV  315 (732)
T ss_pred             HHhhhHHHhCCCCcchHHHHHHHHHhhhe
Confidence            9999999999  77777777777776543

>KOG1027|consensus

Probab=99.98  E-value=1.1e-32  Score=235.45  Aligned_cols=215  Identities=20%  Similarity=0.232  Sum_probs=172.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh--cCCCCH-HHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC--SKRFSL-KTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~--~~~~~~-~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .....+|+..++.-..||||+++|+.-.+..+.|+..|.|..+|.++++..  ...... ........|+++||++||+.
T Consensus       546 ~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl  625 (903)
T KOG1027|consen  546 FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL  625 (903)
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc
Confidence            345678999999999999999999999999999999999999999999952  111111 35577889999999999999


Q ss_pred             CccccCCCCCceEeeccC--CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRE--NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~--~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +|+||||||.||||...+  ...+++|+|||++...........+.....||..|.|||++.....+..+||||+||++|
T Consensus       626 ~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfy  705 (903)
T KOG1027|consen  626 KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFY  705 (903)
T ss_pred             ccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEE
Confidence            999999999999998732  235789999999999888776666667788999999999999988888999999999999


Q ss_pred             HHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         165 YFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       165 ~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.++ |.+||......+     .+|..+......-+  +.-.....+||.+|++.+|..||++.+++.
T Consensus       706 YvltgG~HpFGd~~~R~-----~NIl~~~~~L~~L~--~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  706 YVLTGGSHPFGDSLERQ-----ANILTGNYTLVHLE--PLPDCEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             EEecCCccCCCchHHhh-----hhhhcCccceeeec--cCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence            9998 599998743221     22333322221111  111127999999999999999999999964

>KOG1025|consensus

Probab=99.98  E-value=1.8e-32  Score=233.99  Aligned_cols=222  Identities=17%  Similarity=0.241  Sum_probs=190.9

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ....++..|+..+.++. |||++++++++..+. +.+|++|+ .|+|.++++.....+..+..+.|..||++|+.|||++
T Consensus       740 ~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q  817 (1177)
T KOG1025|consen  740 KASIELLDEALRMASLD-HPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ  817 (1177)
T ss_pred             hhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc
Confidence            34568999999999998 999999999999876 88999999 9999999998888899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      +++||||-.+|+|+..-   ..+|+.|||++............ ..-.-...|+|-|.+....++.++||||+||++||+
T Consensus       818 rlVHrdLaaRNVLVksP---~hvkitdfgla~ll~~d~~ey~~-~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWEl  893 (1177)
T KOG1025|consen  818 RLVHRDLAARNVLVKSP---NHVKITDFGLAKLLAPDEKEYSA-PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL  893 (1177)
T ss_pred             chhhhhhhhhheeecCC---CeEEEEecchhhccCcccccccc-cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence            99999999999999754   78999999999877665433322 333456789999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKER  242 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~  242 (257)
                      +| |..|+.+....+....+....+       -+.++.++-++.-++-+||..|++.||+++++.+.+.++.+...+
T Consensus       894 mTFGa~Py~gi~~~eI~dlle~geR-------LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqr  963 (1177)
T KOG1025|consen  894 MTFGAKPYDGIPAEEIPDLLEKGER-------LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQR  963 (1177)
T ss_pred             HhcCCCccCCCCHHHhhHHHhcccc-------CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcce
Confidence            99 9999999766554444433322       222378999999999999999999999999999999999887664

>KOG0587|consensus

Probab=99.98  E-value=4.4e-32  Score=232.97  Aligned_cols=214  Identities=22%  Similarity=0.315  Sum_probs=176.5

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeee-----CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTS-----GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISR   79 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-----~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~   79 (257)
                      ....++++.|.++++.+.+|||++.++++|..     ++.+++||||| |||..|+.+.. +.++.+..+..|++.++.|
T Consensus        56 ~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrg  135 (953)
T KOG0587|consen   56 EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRG  135 (953)
T ss_pred             ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHH
Confidence            45567899999999999999999999998864     45799999999 99999999965 6789999999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-----CCCCcc
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-----DQSPRD  154 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~~  154 (257)
                      +++||...++|+|||-.||+++.+   +.|||+|||.+..+......   ..+..||+.|||||++...     .++.++
T Consensus       136 l~HLH~nkviHRDikG~NiLLT~e---~~VKLvDFGvSaQldsT~gr---RnT~iGtP~WMAPEViac~e~~d~tyd~R~  209 (953)
T KOG0587|consen  136 LAHLHNNKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDSTVGR---RNTFIGTPYWMAPEVIACDESPDATYDYRS  209 (953)
T ss_pred             HHHHhhcceeeecccCceEEEecc---CcEEEeeeeeeeeeeccccc---ccCcCCCcccccceeeecccCCCCCccccc
Confidence            999999999999999999999987   99999999998776554322   2677899999999998644     357789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+||||++..||..|.+|+..+.+.   ..+..+.+.  +.+...-+..++.+|.++|..||..|..+||+..++++
T Consensus       210 D~WsLGITaIEladG~PPl~DmHPm---raLF~IpRN--PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  210 DLWSLGITAIEMAEGAPPLCDMHPM---RALFLIPRN--PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             chhhccceeehhcCCCCCccCcchh---hhhccCCCC--CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            9999999999999999999886432   111111111  11111124678899999999999999999999887753

>KOG0666|consensus

Probab=99.98  E-value=8.9e-32  Score=207.32  Aligned_cols=221  Identities=16%  Similarity=0.121  Sum_probs=173.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEeccCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELLGPSLEDLFQYC----SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ....-+|+.++..|+ |||++.+..+|.. +...++++||...+|+++++..    .+.++...+..++.||+.|+.|||
T Consensus        71 S~SAcREiaL~REl~-h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH  149 (438)
T KOG0666|consen   71 SMSACREIALLRELK-HPNVISLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH  149 (438)
T ss_pred             CHHHHHHHHHHHHhc-CCcchhHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh
Confidence            346778999999999 9999999988876 7789999999999999999854    356888999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccC-CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRE-NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYT  162 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~  162 (257)
                      +..++||||||.||++..++ ..|.|||+|+|+++.+.....+.......+-|..|.|||.+.|. .|++..|||++|||
T Consensus       150 ~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCI  229 (438)
T KOG0666|consen  150 SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCI  229 (438)
T ss_pred             hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHH
Confidence            99999999999999998763 35899999999999887765554444566789999999999887 47999999999999


Q ss_pred             HHHHHhCCCCCCCCCCcc------HHHHHHHHHHHHhhC---Ch-----------------------------hhhhcCC
Q psy2769         163 LVYFLRGKLPWQSIKSDN------EETRMQRVTEMKLTM---TP-----------------------------EAICEGT  204 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~-----------------------------~~~~~~~  204 (257)
                      +.||++-++.|.+.....      ....+.+|.......   .+                             -.....-
T Consensus       230 faElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k  309 (438)
T KOG0666|consen  230 FAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVK  309 (438)
T ss_pred             HHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCC
Confidence            999999888886632111      112222222210000   00                             0001234


Q ss_pred             cHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         205 PPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       205 ~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++...+|+.++|..||.+|+|+++.++
T Consensus       310 ~~~a~~LL~klL~yDP~kRIta~qAle  336 (438)
T KOG0666|consen  310 DPSALDLLQKLLTYDPIKRITAEQALE  336 (438)
T ss_pred             CchHHHHHHHHhccCchhhccHHHHhc
Confidence            566889999999999999999998876

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.98  E-value=2.6e-31  Score=246.57  Aligned_cols=217  Identities=16%  Similarity=0.219  Sum_probs=162.3

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCC
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH---RKK   87 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~   87 (257)
                      ....|+..+.+++ ||||+++++++.+....++||||+ +++|.++++    .+++..+..++.|++.|++|+|   +.+
T Consensus       729 ~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~  803 (968)
T PLN00113        729 IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPA  803 (968)
T ss_pred             ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            3456799999997 999999999999999999999999 999999997    3789999999999999999999   679


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|||+||+||+++.+   +..++. ++........       ....++..|+|||++.+..++.++||||+|+++|||+
T Consensus       804 iiH~dlkp~Nil~~~~---~~~~~~-~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~  872 (968)
T PLN00113        804 VVVGNLSPEKIIIDGK---DEPHLR-LSLPGLLCTD-------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELL  872 (968)
T ss_pred             eecCCCCHHhEEECCC---CceEEE-eccccccccC-------CCccccccccCcccccCCCCCcccchhhHHHHHHHHH
Confidence            9999999999999765   445543 4433221111       2336788999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCcc-HHHHHHHHHH--HHh-hCChhhh------hcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         168 RGKLPWQSIKSDN-EETRMQRVTE--MKL-TMTPEAI------CEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       168 ~g~~p~~~~~~~~-~~~~~~~~~~--~~~-~~~~~~~------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      +|+.||....... ......+...  ... ....+..      .......+.+++.+||+.+|++||++.++++.|+++.
T Consensus       873 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~  952 (968)
T PLN00113        873 TGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESAS  952 (968)
T ss_pred             hCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhh
Confidence            9999996432211 1000000000  000 0000000      0112235778999999999999999999999999998


Q ss_pred             HhccccC
Q psy2769         238 ENKERCE  244 (257)
Q Consensus       238 ~~~~~~~  244 (257)
                      +....+.
T Consensus       953 ~~~~~~~  959 (968)
T PLN00113        953 RSSSSCV  959 (968)
T ss_pred             ccccccc
Confidence            8655444

>KOG0662|consensus

Probab=99.97  E-value=5.9e-32  Score=193.50  Aligned_cols=215  Identities=17%  Similarity=0.146  Sum_probs=175.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .....+|+-+++.|+ |.||+++++...++..+-+|+|+|..+|..++...++.++.+.+..++.|++.||.|.|+++++
T Consensus        45 pssalreicllkelk-hknivrl~dvlhsdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvl  123 (292)
T KOG0662|consen   45 PSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVL  123 (292)
T ss_pred             cHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhh
Confidence            346789999999999 9999999999998888999999999999999998899999999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~  168 (257)
                      |||+||.|.+++.+   |.+|+.|||+++.++-...   +-...+-|..|.+|.++.+.. ++...|+||.||++.|+..
T Consensus       124 hrdlkpqnllin~n---gelkladfglarafgipvr---cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelan  197 (292)
T KOG0662|consen  124 HRDLKPQNLLINRN---GELKLADFGLARAFGIPVR---CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN  197 (292)
T ss_pred             hccCCcceEEeccC---CcEEecccchhhhcCCceE---eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhh
Confidence            99999999999877   9999999999987754321   113456789999999998876 6889999999999999987


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChh---------------------hhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPE---------------------AICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                       |++.|.+.+-.+....+.++........++                     .+.+.++..-++++++++.-+|.+|+++
T Consensus       198 agrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisa  277 (292)
T KOG0662|consen  198 AGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISA  277 (292)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCH
Confidence             888888854444444433332222221222                     2223344456799999999999999999


Q ss_pred             HHHHH
Q psy2769         227 GKLRD  231 (257)
Q Consensus       227 ~~~~~  231 (257)
                      ++.++
T Consensus       278 eaalq  282 (292)
T KOG0662|consen  278 EAALQ  282 (292)
T ss_pred             HHHhc
Confidence            87754

>KOG1006|consensus

Probab=99.97  E-value=3.8e-33  Score=210.53  Aligned_cols=215  Identities=22%  Similarity=0.296  Sum_probs=175.1

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC----SKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...++++.|.++..+-.++|+|+++||..-..+-.++.||.|..||..+.+.-    ...+++.-+.+++--.+.||.||
T Consensus       104 keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yL  183 (361)
T KOG1006|consen  104 KEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYL  183 (361)
T ss_pred             HHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHH
Confidence            35678999999999998999999999998888889999999999987777643    56799999999999999999999


Q ss_pred             H-hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC--CCCCcchHHHHH
Q psy2769          84 H-RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL--DQSPRDDLEALC  160 (257)
Q Consensus        84 h-~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slg  160 (257)
                      - ...|+|||+||+|||++..   |.+||||||.+-.+..+..    .....|...|+|||.+...  .++.++||||||
T Consensus       184 K~~lkiIHRDvKPSNILldr~---G~vKLCDFGIcGqLv~SiA----kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLG  256 (361)
T KOG1006|consen  184 KEELKIIHRDVKPSNILLDRH---GDVKLCDFGICGQLVDSIA----KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLG  256 (361)
T ss_pred             HHHhhhhhccCChhheEEecC---CCEeeecccchHhHHHHHH----hhhccCCccccChhccCCccCCcchhhhhhhhc
Confidence            6 6689999999999999877   8999999999865544321    1445788999999998543  578999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhh-hhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA-ICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++++|+.||..|+..-  .+..+.+..+..+..+..... ..-.++.++..+|.-|+.+|-+.||+++++++
T Consensus       257 ITL~EvAtG~fPyr~w--~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  257 ITLYEVATGNFPYRKW--DSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             ceEeeeecCCCCcchH--HHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            9999999999999874  234555555555444432211 11347888999999999999999999999976

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=3.1e-30  Score=229.24  Aligned_cols=104  Identities=30%  Similarity=0.446  Sum_probs=95.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+..|+.++..++ ||+|+++++.+......|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||..||
T Consensus        48 ~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gI  125 (669)
T cd05610          48 VHQVQAERDALALSK-SPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGI  125 (669)
T ss_pred             HHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            367888999999998 999999999999999999999999 9999999874 4568999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      +|+||||+||+++.+   +.++|+|||++.
T Consensus       126 iHrDLKP~NILl~~~---g~vkL~DFGls~  152 (669)
T cd05610         126 IHRDLKPDNMLISNE---GHIKLTDFGLSK  152 (669)
T ss_pred             EeCCccHHHEEEcCC---CCEEEEeCCCCc
Confidence            999999999999765   889999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0608|consensus

Probab=99.97  E-value=1.1e-30  Score=217.98  Aligned_cols=208  Identities=20%  Similarity=0.244  Sum_probs=167.3

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ++.+..++.|-.||..-- ++-|+++|-.|.+++.+|+||+|+ ||++-.++-. -+-|.++.++.++.++..|+.+.|+
T Consensus       670 rnQvaHVKAERDILAEAD-n~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHk  747 (1034)
T KOG0608|consen  670 RNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHK  747 (1034)
T ss_pred             hhhhhhhhhhhhhHhhcC-CcceEEEEEEeccCCceEEEEeccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHh
Confidence            345567888999998887 899999999999999999999999 9999988874 5679999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCC---------------------------------------CC
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNC---------------------------------------PP  126 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~---------------------------------------~~  126 (257)
                      +|++||||||+||||+.|   |.+||+|||++..+....                                       ..
T Consensus       748 mGFIHRDiKPDNILIDrd---GHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~  824 (1034)
T KOG0608|consen  748 MGFIHRDIKPDNILIDRD---GHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQ  824 (1034)
T ss_pred             ccceecccCccceEEccC---CceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhh
Confidence            999999999999999988   999999999986432211                                       00


Q ss_pred             CCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcH
Q psy2769         127 RIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPP  206 (257)
Q Consensus       127 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (257)
                      ....-..+||+.|+|||++....++..+|.||.||++|||+.|++||-..........+..   .. .+..-.....+++
T Consensus       825 r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~n---w~-~~l~~~~~~~ls~  900 (1034)
T KOG0608|consen  825 RILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVIN---WR-NFLHIPYQGNLSK  900 (1034)
T ss_pred             hhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeee---hh-hccccccccccCH
Confidence            0001234799999999999999999999999999999999999999988665544332222   11 1222223367899


Q ss_pred             HHHHHHHHHhcCCCCCCC
Q psy2769         207 EFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       207 ~~~~li~~~l~~~p~~Rp  224 (257)
                      ++.++|.++. .+++.|.
T Consensus       901 e~~~li~kLc-~sad~RL  917 (1034)
T KOG0608|consen  901 EALDLIQKLC-CSADSRL  917 (1034)
T ss_pred             HHHHHHHHHh-cChhhhh
Confidence            9999999887 5677775

>KOG3653|consensus

Probab=99.97  E-value=4e-30  Score=207.79  Aligned_cols=228  Identities=22%  Similarity=0.249  Sum_probs=179.6

Q ss_pred             CcccccHHHHHHHHHh-cCCCCCcEEEeeeeeCC----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKL-HGAPGVPHVMGYGTSGD----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l-~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      +.++.+.+|-+++... ..|+||+++++.-....    ..++|++|. .|+|.+++.  ...+++....+++..++.||+
T Consensus       244 ~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa  321 (534)
T KOG3653|consen  244 QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLA  321 (534)
T ss_pred             HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHH
Confidence            4567899999998874 24999999999876544    789999999 999999999  567999999999999999999


Q ss_pred             HHHh---------CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC--
Q psy2769          82 HVHR---------KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ--  150 (257)
Q Consensus        82 ~lh~---------~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~--  150 (257)
                      |||+         ..|+|||||.+|||+..|   .++-|+|||++..+.+..+.... ...+||.+|||||++.+.--  
T Consensus       322 ~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D---lTccIaDFGLAl~~~p~~~~~d~-~~qVGT~RYMAPEvLEgainl~  397 (534)
T KOG3653|consen  322 HLHEELPRGDHHKPPIAHRDLKSKNVLVKND---LTCCIADFGLALRLEPGKPQGDT-HGQVGTRRYMAPEVLEGAINLQ  397 (534)
T ss_pred             HhcccCCcCCCCCCccccccccccceEEccC---CcEEeeccceeEEecCCCCCcch-hhhhhhhhhcCHHHHhhhcccc
Confidence            9994         469999999999999777   99999999999998877655544 44899999999999976521  


Q ss_pred             ----CCcchHHHHHHHHHHHHhCCC------------CCCC--CCCccHHHHHHHHHHHHhhCChhhhh--cCCcHHHHH
Q psy2769         151 ----SPRDDLEALCYTLVYFLRGKL------------PWQS--IKSDNEETRMQRVTEMKLTMTPEAIC--EGTPPEFAE  210 (257)
Q Consensus       151 ----~~~~Dv~slg~~l~~l~~g~~------------p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  210 (257)
                          -.+.||||+|.++|||+++..            ||..  .......++...+.+.+.....+..+  .....-+.+
T Consensus       398 d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~e  477 (534)
T KOG3653|consen  398 DRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCE  477 (534)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHH
Confidence                246899999999999998533            3331  11223344444454444443333332  233456899


Q ss_pred             HHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         211 FLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       211 li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      .+..||+.|++.|.|+.-+.+.+.++.+..+
T Consensus       478 t~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~  508 (534)
T KOG3653|consen  478 TIEECWDHDAEARLTAGCVEERMAELMMLWE  508 (534)
T ss_pred             HHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence            9999999999999999999999999988664

>KOG1164|consensus

Probab=99.97  E-value=2.5e-28  Score=199.86  Aligned_cols=239  Identities=37%  Similarity=0.675  Sum_probs=194.6

Q ss_pred             ccHHHHHHHHHhc---CCCCCcEEEeee-eeCCccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          12 RLFWERNFYEKLH---GAPGVPHVMGYG-TSGDYNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        12 ~~~~E~~~~~~l~---~~~~i~~~~~~~-~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+..|..++..+.   +.++++.+++.+ ......++||+.+|.+|.++..... +.++..++..++.|++.+|.++|+.
T Consensus        62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~  141 (322)
T KOG1164|consen   62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK  141 (322)
T ss_pred             cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence            7999999999998   457999999999 5777899999999999999997654 7899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccC--CCCeEEEEeCCcce--ecCCCCC-----CCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          87 KIVHRDIKPDNFLMGVRE--NFNTVYLVDFGLAV--DFCPNCP-----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~--~~~~~~l~df~~~~--~~~~~~~-----~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      |++||||||.|++++...  ....+.+.|||+++  .+.....     .........||..|.++....+.+.+.+.|+|
T Consensus       142 G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDle  221 (322)
T KOG1164|consen  142 GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLE  221 (322)
T ss_pred             CcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhh
Confidence            999999999999998653  22579999999998  3322221     11111345699999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      |+++++.++..|..||...................   .........|..+.++...+-..+...+|++..+...+++..
T Consensus       222 s~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~  298 (322)
T KOG1164|consen  222 SLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKL---LTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF  298 (322)
T ss_pred             hHHHHHHHHhcCCCCCccccccchHHHHHHHhhhh---ccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence            99999999999999998876544433222222211   111123446678999999999999999999999999999999


Q ss_pred             HhccccCCCCCcccccc
Q psy2769         238 ENKERCEFDLRYDWTLL  254 (257)
Q Consensus       238 ~~~~~~~~~~~~~~~~~  254 (257)
                      ...+ .+.+.++||+.-
T Consensus       299 ~~~~-~~~~~~~dw~~~  314 (322)
T KOG1164|consen  299 DSEG-SKEDSPFDWEVK  314 (322)
T ss_pred             HhcC-CCCCCCCccccc
Confidence            9887 888899999853

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.97  E-value=3.1e-29  Score=188.22  Aligned_cols=168  Identities=18%  Similarity=0.213  Sum_probs=129.4

Q ss_pred             CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCc
Q psy2769          51 PSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRT  130 (257)
Q Consensus        51 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~  130 (257)
                      |||.+++...+..+++.++..++.|++.||.|||+.+      ||+||+++.+   +.+++  ||.+......       
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~---~~~~~--fG~~~~~~~~-------   62 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWD---GLLKL--DGSVAFKTPE-------   62 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCc---cceee--ccceEeeccc-------
Confidence            6899999866677999999999999999999999998      9999999766   78888  9988654332       


Q ss_pred             cCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChh--hhhcCCcH--
Q psy2769         131 RGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPE--AICEGTPP--  206 (257)
Q Consensus       131 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--  206 (257)
                       ...+++.|+|||++.+..++.++||||+|+++|+|++|..||.......  ..+..+........+.  .....++.  
T Consensus        63 -~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (176)
T smart00750       63 -QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS--AILEILLNGMPADDPRDRSNLESVSAAR  139 (176)
T ss_pred             -cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc--HHHHHHHHHhccCCccccccHHHHHhhh
Confidence             2257899999999999999999999999999999999999997643221  1222222221111110  11122333  


Q ss_pred             HHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         207 EFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       207 ~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      .+.+++.+||..+|++||++.++++.+.....+
T Consensus       140 ~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~  172 (176)
T smart00750      140 SFADFMRVCASRLPQRREAANHYLAHCRALFAE  172 (176)
T ss_pred             hHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence            699999999999999999999999987766543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0670|consensus

Probab=99.97  E-value=1.7e-31  Score=218.02  Aligned_cols=214  Identities=19%  Similarity=0.156  Sum_probs=170.9

Q ss_pred             CcccccHHHHHHHHHhcCC-----CCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGA-----PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS--KRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~-----~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l   80 (257)
                      ..++.=++|+++|++|...     -++++++-.|.+.+++|+|+|.+..+|.++++..+  -.+....+..++.|++.||
T Consensus       470 ~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflAL  549 (752)
T KOG0670|consen  470 VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLAL  549 (752)
T ss_pred             HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHH
Confidence            4566778999999999843     47899999999999999999999999999999874  3577789999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .+|-+.|++|.||||+|||++..  ...+||||||.+.....+.     ...+.-+..|.|||++.|.+|+...|+||+|
T Consensus       550 klLK~c~vlHaDIKPDNiLVNE~--k~iLKLCDfGSA~~~~ene-----itPYLVSRFYRaPEIiLG~~yd~~iD~WSvg  622 (752)
T KOG0670|consen  550 KLLKKCGVLHADIKPDNILVNES--KNILKLCDFGSASFASENE-----ITPYLVSRFYRAPEIILGLPYDYPIDTWSVG  622 (752)
T ss_pred             HHHHhcCeeecccCccceEeccC--cceeeeccCcccccccccc-----ccHHHHHHhccCcceeecCcccCCccceeec
Confidence            99999999999999999999853  4679999999997654331     1445566789999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCCh----------------------------------------h--
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP----------------------------------------E--  198 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~--  198 (257)
                      |++|||+||+..|.+.++.   .++...+..+.+++.                                        |  
T Consensus       623 ctLYElYtGkIlFpG~TNN---~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtk  699 (752)
T KOG0670|consen  623 CTLYELYTGKILFPGRTNN---QMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTK  699 (752)
T ss_pred             eeeEEeeccceecCCCCcH---HHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcch
Confidence            9999999999999985443   333333333222220                                        0  


Q ss_pred             h------hhcCCc-------HHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         199 A------ICEGTP-------PEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       199 ~------~~~~~~-------~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .      ..+.+|       ..+.+|+..||..||++|.+..+.+.
T Consensus       700 dl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  700 DLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             hHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            0      001123       35889999999999999999987754

>KOG0665|consensus

Probab=99.97  E-value=1.7e-30  Score=200.70  Aligned_cols=213  Identities=15%  Similarity=0.176  Sum_probs=167.4

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ....+..+|..++..+. |+||++++.+|+-..      ..|+|||++..+|.+.+.   ..++=+++..+++|++.|+.
T Consensus        57 ~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik  132 (369)
T KOG0665|consen   57 THAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIK  132 (369)
T ss_pred             ccchhhhhhhhhhhhhc-ccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHH
Confidence            34567889999999999 999999999997533      579999999999999888   35677899999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY  161 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~  161 (257)
                      ++|+.||+||||||+||++..+   +.+|+.|||++......    .....++.+..|.|||++.+..+...+||||+||
T Consensus       133 ~lhs~~IihRdLkPsnivv~~~---~~lKi~dfg~ar~e~~~----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGc  205 (369)
T KOG0665|consen  133 HLHSAGIIHRDLKPSNIVVNSD---CTLKILDFGLARTEDTD----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC  205 (369)
T ss_pred             HHHhcceeecccCcccceecch---hheeeccchhhcccCcc----cccCchhheeeccCchheeccCCcccchhhhhhh
Confidence            9999999999999999999877   89999999999765433    2336778899999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHH--------------HhhCChh--------hh------------hcCCcHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEM--------------KLTMTPE--------AI------------CEGTPPE  207 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------------~~~~~~~--------~~------------~~~~~~~  207 (257)
                      ++.||++|...|.+...-+....+......              ....+.+        +.            ...-+..
T Consensus       206 i~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~  285 (369)
T KOG0665|consen  206 IMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSL  285 (369)
T ss_pred             HHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHH
Confidence            999999999999874433322211110000              0000000        00            0012234


Q ss_pred             HHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         208 FAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       208 ~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .++++.+||..||++|.+++++++
T Consensus       286 ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  286 ARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             HHHHHHHhhccChhhcccHHHHhc
Confidence            889999999999999999999875

>KOG0984|consensus

Probab=99.97  E-value=3e-30  Score=188.25  Aligned_cols=175  Identities=20%  Similarity=0.293  Sum_probs=146.1

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+..++...|+++..+...+|+++++||..-+..-.++.||.|..||..+.+.-   ++.+++..+.+++-.++.||.||
T Consensus        85 ~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L  164 (282)
T KOG0984|consen   85 SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFL  164 (282)
T ss_pred             hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHH
Confidence            345668889999999998899999999988888889999999999998777653   67899999999999999999999


Q ss_pred             Hh-CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC----CCCCCcchHHH
Q psy2769          84 HR-KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW----LDQSPRDDLEA  158 (257)
Q Consensus        84 h~-~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~----~~~~~~~Dv~s  158 (257)
                      |+ ..++|||+||.|||++.+   |++|+||||.+-.+..+...    ....|...|+|||.+..    ..|+-++||||
T Consensus       165 ~~kL~vIHRDvKPsNiLIn~~---GqVKiCDFGIsG~L~dSiAk----t~daGCkpYmaPEri~~e~n~~gY~vksDvWS  237 (282)
T KOG0984|consen  165 HSKLSVIHRDVKPSNILINYD---GQVKICDFGISGYLVDSIAK----TMDAGCKPYMAPERINPELNQKGYSVKSDVWS  237 (282)
T ss_pred             HHHhhhhhccCCcceEEEccC---CcEEEcccccceeehhhhHH----HHhcCCCccCChhhcCcccCcccceeehhhhh
Confidence            95 589999999999999888   99999999998766554321    22568889999998853    36788999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCccHHHHHHHHHH
Q psy2769         159 LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTE  190 (257)
Q Consensus       159 lg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  190 (257)
                      ||+++.||.+++.||..-  ....+.+..+..
T Consensus       238 LGItmiElA~lr~PY~~w--~tpF~qLkqvVe  267 (282)
T KOG0984|consen  238 LGITMIEMAILRFPYESW--GTPFQQLKQVVE  267 (282)
T ss_pred             hhhhhhhhhhcccccccc--CCHHHHHHHHhc
Confidence            999999999999999863  344444444443

>KOG1035|consensus

Probab=99.96  E-value=1.2e-29  Score=224.38  Aligned_cols=181  Identities=22%  Similarity=0.290  Sum_probs=133.9

Q ss_pred             ccEEEEecc-CCCHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          41 YNILVMELL-GPSLEDLFQYCSKRF-SLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        41 ~~~~v~e~~-~~~L~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .+|+=|||| ..++.++++. +... .....++++++|+.||+|+|++||+||||||.||+++.+   +.|||+|||++.
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~-N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~---~~VKIGDFGLAt  745 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRR-NHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSR---NSVKIGDFGLAT  745 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHh-cccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCC---CCeeecccccch
Confidence            368999999 6666666663 3322 578899999999999999999999999999999999866   889999999987


Q ss_pred             ecC---CC------------CCCCCCccCCCCcccccChhHhcCCC---CCCcchHHHHHHHHHHHHhCCCCCCCCCCcc
Q psy2769         119 DFC---PN------------CPPRIRTRGLTGTARYASVNAHQWLD---QSPRDDLEALCYTLVYFLRGKLPWQSIKSDN  180 (257)
Q Consensus       119 ~~~---~~------------~~~~~~~~~~~~~~~~~aPE~~~~~~---~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~  180 (257)
                      ...   ..            ..........+||..|+|||++.+..   ++.|+|+||||++++||+   .||...  -+
T Consensus       746 ~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~Ts--ME  820 (1351)
T KOG1035|consen  746 DLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTS--ME  820 (1351)
T ss_pred             hhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCch--HH
Confidence            621   00            01111224578999999999997665   899999999999999997   466541  23


Q ss_pred             HHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         181 EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ....+..+..+..+.+ +.+...--+.-..+|+.|++.||++||||.+++.
T Consensus       821 Ra~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  821 RASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence            3333444443333333 1112222234678999999999999999999875

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.96  E-value=1.1e-29  Score=230.51  Aligned_cols=196  Identities=15%  Similarity=0.098  Sum_probs=142.3

Q ss_pred             CCCcEEEeeee-------eCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceE
Q psy2769          27 PGVPHVMGYGT-------SGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL   99 (257)
Q Consensus        27 ~~i~~~~~~~~-------~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nil   99 (257)
                      +||+.++++|.       ....++.++|+++++|.+++......++..++..++.||+.||.|||++||+||||||+||+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiL  112 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFV  112 (793)
T ss_pred             HHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence            68888888872       23467888998899999999854566999999999999999999999999999999999999


Q ss_pred             eecc----------------CCCCeEEEEeCCcceecCCCCC-------------CCCCccCCCCcccccChhHhcCCCC
Q psy2769         100 MGVR----------------ENFNTVYLVDFGLAVDFCPNCP-------------PRIRTRGLTGTARYASVNAHQWLDQ  150 (257)
Q Consensus       100 i~~~----------------~~~~~~~l~df~~~~~~~~~~~-------------~~~~~~~~~~~~~~~aPE~~~~~~~  150 (257)
                      ++..                ...+.++++|||++........             .........+|+.|+|||++.+..+
T Consensus       113 l~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~  192 (793)
T PLN00181        113 MSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSS  192 (793)
T ss_pred             EcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCC
Confidence            9642                1224566777776653211000             0000012457889999999999999


Q ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         151 SPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       151 ~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      +.++|||||||++|||++|..|+....     ..+..+....   .++.... ..+...+++..||+.+|.+||++.+++
T Consensus       193 ~~~sDVwSlGviL~ELl~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~L~~~P~~Rps~~eil  263 (793)
T PLN00181        193 NCASDVYRLGVLLFELFCPVSSREEKS-----RTMSSLRHRV---LPPQILL-NWPKEASFCLWLLHPEPSCRPSMSELL  263 (793)
T ss_pred             CchhhhhhHHHHHHHHhhCCCchhhHH-----HHHHHHHHhh---cChhhhh-cCHHHHHHHHHhCCCChhhCcChHHHh
Confidence            999999999999999999888765321     1111111111   1111112 234567899999999999999999996


Q ss_pred             H
Q psy2769         231 D  231 (257)
Q Consensus       231 ~  231 (257)
                      +
T Consensus       264 ~  264 (793)
T PLN00181        264 Q  264 (793)
T ss_pred             h
Confidence            5

>KOG1151|consensus

Probab=99.96  E-value=1.7e-29  Score=203.34  Aligned_cols=219  Identities=19%  Similarity=0.226  Sum_probs=168.7

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+..+..-+|..+-+.|. ||.|+++|++|.- .+.+|-|.||| |.+|.=+++ ..+.+++.++..|+.||+.||.||.
T Consensus       508 eNYhKHAcREyrIHKeLD-HpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLK-QhklmSEKEARSIiMQiVnAL~YLN  585 (775)
T KOG1151|consen  508 ENYHKHACREYRIHKELD-HPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLK-QHKLMSEKEARSIIMQIVNALKYLN  585 (775)
T ss_pred             hhHHHHHHHHHhhhhccC-cceeeeeeeeeeeccccceeeeeecCCCchhHHHH-hhhhhhHHHHHHHHHHHHHHHHHHh
Confidence            455667778999999998 9999999999974 45799999999 777766666 5788999999999999999999998


Q ss_pred             hC--CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC----CCCccCCCCcccccChhHhcCC----CCCCcc
Q psy2769          85 RK--KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP----RIRTRGLTGTARYASVNAHQWL----DQSPRD  154 (257)
Q Consensus        85 ~~--~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~----~~~~~~  154 (257)
                      +.  -|+|-||||.||++.....-|.+||+|||++.........    ..-+....||..|++||.+...    ..+.+.
T Consensus       586 EikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKV  665 (775)
T KOG1151|consen  586 EIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKV  665 (775)
T ss_pred             ccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccce
Confidence            65  4999999999999987656689999999998765443211    1112345799999999988644    357899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH-HHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRV-TEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      ||||+||++|.-+.|+-||........--....| ......+++.   +.++.+..++|++||+..-++|.+..++.
T Consensus       666 DVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K---PvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  666 DVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK---PVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             eeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC---CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            9999999999999999999874322111111111 1112222222   56888999999999999999999877764

>KOG0668|consensus

Probab=99.96  E-value=6.9e-29  Score=183.97  Aligned_cols=220  Identities=15%  Similarity=0.222  Sum_probs=167.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+.+|+.+++.|.|+|||+++++...+  +..+.+|+|++ ..+...+..    .++.-.+..++.+++.||.|+|+
T Consensus        75 kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS  150 (338)
T KOG0668|consen   75 KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHS  150 (338)
T ss_pred             HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHh
Confidence            456799999999999999999999998865  44678999999 777666555    47888999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLV  164 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~  164 (257)
                      +||.|||+||.|++++..  ...++|+|+|++....+...-    ..++.+..|-.||.+.... ++..-|+|||||++.
T Consensus       151 ~GImHRDVKPhNvmIdh~--~rkLrlIDWGLAEFYHp~~eY----nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA  224 (338)
T KOG0668|consen  151 MGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA  224 (338)
T ss_pred             cCcccccCCcceeeechh--hceeeeeecchHhhcCCCcee----eeeeehhhcCCchheeechhccccHHHHHHHHHHH
Confidence            999999999999999853  367999999999887765322    3456777889999987654 678899999999999


Q ss_pred             HHHhCCCCCCCC-CCccHHHHHHHHHHH----------HhhCC-------------------hhhhhcCCcHHHHHHHHH
Q psy2769         165 YFLRGKLPWQSI-KSDNEETRMQRVTEM----------KLTMT-------------------PEAICEGTPPEFAEFLRY  214 (257)
Q Consensus       165 ~l~~g~~p~~~~-~~~~~~~~~~~~~~~----------~~~~~-------------------~~~~~~~~~~~~~~li~~  214 (257)
                      .|+..+-||... ++.+....+.++...          .....                   .+....-.+++..+++.+
T Consensus       225 ~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldk  304 (338)
T KOG0668|consen  225 SMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDK  304 (338)
T ss_pred             HHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHH
Confidence            999877776543 333433333332111          11110                   111112356889999999


Q ss_pred             HhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         215 CRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       215 ~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      +|..|.++|+|+.+.+.  .+....+
T Consensus       305 lLrYDHqeRlTakEam~HpyF~~~~~  330 (338)
T KOG0668|consen  305 LLRYDHQERLTAKEAMAHPYFAPVRE  330 (338)
T ss_pred             HHhhccccccchHHHhcCchHHHHHH
Confidence            99999999999999875  4444444

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.96  E-value=1e-27  Score=184.05  Aligned_cols=177  Identities=26%  Similarity=0.382  Sum_probs=155.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+..++.+. +++++++++++......++++|++ +++|.+++......++...+..++.+++.++.+||+.|+
T Consensus        35 ~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~  113 (215)
T cd00180          35 LEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGI  113 (215)
T ss_pred             HHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            367999999999998 899999999999988999999999 799999998543478999999999999999999999999


Q ss_pred             cccCCCCCceEeec-cCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGV-RENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        89 ~H~dl~~~nili~~-~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l  166 (257)
                      +|+||+|.||+++. +   +.++|+|||.+........   ......+...|.+||..... ..+.++|+|++|++++++
T Consensus       114 ~H~dl~~~ni~~~~~~---~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         114 IHRDLKPENILLDSDN---GKVKLADFGLSKLLTSDKS---LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             eccCCCHhhEEEeCCC---CcEEEecCCceEEccCCcc---hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            99999999999986 4   7899999999876644321   11345678899999999887 778999999999999998


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                                                             ..+.+++..|+..+|++||++.++++.
T Consensus       188 ---------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ---------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ---------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                                                   458899999999999999999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1152|consensus

Probab=99.95  E-value=9e-29  Score=204.38  Aligned_cols=155  Identities=23%  Similarity=0.304  Sum_probs=140.3

Q ss_pred             ccHHHHHHHHHhc--CCCCCcEEEeeeeeCCccEEEEecc--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          12 RLFWERNFYEKLH--GAPGVPHVMGYGTSGDYNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        12 ~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~~~~~v~e~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+--|+.||.+|+  .|+||++++++|++++++|++||..  |.+|+++++ ...++++.++..++.|++.|+++||+.|
T Consensus       612 tVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE-~kp~m~E~eAk~IFkQV~agi~hlh~~~  690 (772)
T KOG1152|consen  612 TVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIE-FKPRMDEPEAKLIFKQVVAGIKHLHDQG  690 (772)
T ss_pred             ccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhh-ccCccchHHHHHHHHHHHhccccccccC
Confidence            4667999999997  5799999999999999999999998  789999999 4778999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l  166 (257)
                      |+|||||-+|+.++.+   |.+||+|||.+....++. -    -.++||..|.|||++.|.+| +...|||++|+++|-+
T Consensus       691 ivhrdikdenvivd~~---g~~klidfgsaa~~ksgp-f----d~f~gtv~~aapevl~g~~y~gk~qdiwalgillyti  762 (772)
T KOG1152|consen  691 IVHRDIKDENVIVDSN---GFVKLIDFGSAAYTKSGP-F----DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTI  762 (772)
T ss_pred             ceecccccccEEEecC---CeEEEeeccchhhhcCCC-c----ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEE
Confidence            9999999999999877   999999999987654331 1    46789999999999999987 7899999999999999


Q ss_pred             HhCCCCCCC
Q psy2769         167 LRGKLPWQS  175 (257)
Q Consensus       167 ~~g~~p~~~  175 (257)
                      +..+.||.+
T Consensus       763 vykenpyyn  771 (772)
T KOG1152|consen  763 VYKENPYYN  771 (772)
T ss_pred             EeccCCCcC
Confidence            999999975

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=4.3e-27  Score=204.72  Aligned_cols=187  Identities=18%  Similarity=0.131  Sum_probs=127.2

Q ss_pred             eeCCccEEEEecc-CCCHHHHHHHhcCC-------------------CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q psy2769          37 TSGDYNILVMELL-GPSLEDLFQYCSKR-------------------FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD   96 (257)
Q Consensus        37 ~~~~~~~~v~e~~-~~~L~~~~~~~~~~-------------------~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~   96 (257)
                      ......++|+||+ +++|.+++......                   .....+..++.|++.||.|||+.||+||||||+
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~  284 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ  284 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHH
Confidence            3456789999999 99999998743211                   112346689999999999999999999999999


Q ss_pred             ceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC----------------------CCCcc
Q psy2769          97 NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD----------------------QSPRD  154 (257)
Q Consensus        97 nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----------------------~~~~~  154 (257)
                      ||+++.+  .+.+||+|||++..+......  ......+++.|+|||.+....                      ++.++
T Consensus       285 NILl~~~--~~~~KL~DFGlA~~l~~~~~~--~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~  360 (566)
T PLN03225        285 NIIFSEG--SGSFKIIDLGAAADLRVGINY--IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF  360 (566)
T ss_pred             HEEEeCC--CCcEEEEeCCCcccccccccc--CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence            9999742  368999999999754332211  124567889999999764322                      23456


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHh----------hCChh------hhhcCCcHHHHHHHHHHhcC
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKL----------TMTPE------AICEGTPPEFAEFLRYCRGL  218 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----------~~~~~------~~~~~~~~~~~~li~~~l~~  218 (257)
                      ||||+||++|||+++..++..    +.......+.....          ....+      +.....+....+||.+||..
T Consensus       361 DVwSlGviL~el~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~  436 (566)
T PLN03225        361 DIYSAGLIFLQMAFPNLRSDS----NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF  436 (566)
T ss_pred             ccHHHHHHHHHHHhCcCCCch----HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence            999999999999987655432    11111111110000          00000      00111223455899999999


Q ss_pred             CCCCCCChHHHHH
Q psy2769         219 AFSEEPNYGKLRD  231 (257)
Q Consensus       219 ~p~~Rp~~~~~~~  231 (257)
                      ||++|||++++++
T Consensus       437 dP~kR~ta~e~L~  449 (566)
T PLN03225        437 KGRQRISAKAALA  449 (566)
T ss_pred             CcccCCCHHHHhC
Confidence            9999999999986

>KOG0664|consensus

Probab=99.95  E-value=1.1e-28  Score=187.53  Aligned_cols=215  Identities=16%  Similarity=0.173  Sum_probs=161.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-----CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      -+++.+|+.++..++ |.|++..+++..-.     ..+|+++|.+..+|...+- ....++.+.+.-+++||+.||.|||
T Consensus        96 ~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKIIV-SPQ~Ls~DHvKVFlYQILRGLKYLH  173 (449)
T KOG0664|consen   96 CKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKIIV-SPQALTPDHVKVFVYQILRGLKYLH  173 (449)
T ss_pred             HHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhheec-cCCCCCcchhhhhHHHHHhhhHHHh
Confidence            457899999999999 99999998876532     2478888888777777666 3778999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTL  163 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l  163 (257)
                      +.||+||||||.|.+++++   ..+||||||+++.........  ....+-|..|.|||++.|. .|+...||||+||++
T Consensus       174 sA~ILHRDIKPGNLLVNSN---CvLKICDFGLARvee~d~~~h--MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIF  248 (449)
T KOG0664|consen  174 TANILHRDIKPGNLLVNSN---CILKICDFGLARTWDQRDRLN--MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIF  248 (449)
T ss_pred             hcchhhccCCCccEEeccC---ceEEecccccccccchhhhhh--hHHHHHHHHhccHHHhhcchhhcCccceehhhHHH
Confidence            9999999999999999877   899999999998654432111  1233567899999999877 478899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHH------------HHHh------hCChhh--hhc------CCcHHHHHHHHHHhc
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVT------------EMKL------TMTPEA--ICE------GTPPEFAEFLRYCRG  217 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~------------~~~~------~~~~~~--~~~------~~~~~~~~li~~~l~  217 (257)
                      .|++.++..|....+-...+.+....            ++..      ....+.  ...      ....+...++..++.
T Consensus       249 aELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~  328 (449)
T KOG0664|consen  249 AELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLH  328 (449)
T ss_pred             HHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhC
Confidence            99999999998755443333322211            1100      000010  011      122346788889999


Q ss_pred             CCCCCCCChHHHHH
Q psy2769         218 LAFSEEPNYGKLRD  231 (257)
Q Consensus       218 ~~p~~Rp~~~~~~~  231 (257)
                      .||+.|.+-++.+.
T Consensus       329 ~d~dkris~~~A~~  342 (449)
T KOG0664|consen  329 FDPDKRISVEEALQ  342 (449)
T ss_pred             CCCcccccHhhhcc
Confidence            99999998776654

>KOG1345|consensus

Probab=99.95  E-value=5.5e-28  Score=183.27  Aligned_cols=219  Identities=18%  Similarity=0.215  Sum_probs=167.4

Q ss_pred             ccCCCC-CcccccHHHHHHHHHhcCCCCCcEEEe-eeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy2769           2 KVEPVR-NPVQRLFWERNFYEKLHGAPGVPHVMG-YGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMIS   78 (257)
Q Consensus         2 k~~~~~-~~~~~~~~E~~~~~~l~~~~~i~~~~~-~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~   78 (257)
                      |..+.+ .....|.+|.+---.|..|.||+.-|+ .|++.+..++++|++ .|+|.+-+.  ...+.+....+++.|+++
T Consensus        55 Kavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~--~~GigE~~~K~v~~ql~S  132 (378)
T KOG1345|consen   55 KAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVE--AAGIGEANTKKVFAQLLS  132 (378)
T ss_pred             eccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcC--cccccHHHHHHHHHHHHH
Confidence            444444 345678889888888888999998876 578888899999999 999988777  567889999999999999


Q ss_pred             HHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-----CCCCc
Q psy2769          79 RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-----DQSPR  153 (257)
Q Consensus        79 ~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~~~~  153 (257)
                      |+.|+|+.++||||||.+||||... +..++|+||||.....+...      .....+..|.+||.....     ...+.
T Consensus       133 Ai~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k~g~tV------~~~~~~~~y~~pe~~~~~~ne~~~~~ps  205 (378)
T KOG1345|consen  133 AIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRKVGTTV------KYLEYVNNYHAPELCDTVVNEKLVVNPS  205 (378)
T ss_pred             HHHHhhccchhhcccccceEEEecC-CccEEEeeecccccccCcee------hhhhhhcccCCcHHHhhccccceEeccc
Confidence            9999999999999999999999864 33599999999987654432      333456788899876432     24788


Q ss_pred             chHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHH--HhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         154 DDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEM--KLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|+|.||++++..++|..||......+  ..+.+..+.  ......|..+..+++.+..+.++-|..++.+|=...+..+
T Consensus       206 ~D~WqfGIi~f~cltG~~PWQka~~~d--~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  206 TDIWQFGIIFFYCLTGKFPWQKASIMD--KPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             ccchheeeeeeeeecCCCcchhhhccC--chHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence            999999999999999999999543322  222222222  2222445555778888999999999999999944444433

>KOG1290|consensus

Probab=99.95  E-value=7.3e-27  Score=189.65  Aligned_cols=103  Identities=22%  Similarity=0.360  Sum_probs=88.0

Q ss_pred             CccCCC-CCcccccHHHHHHHHHhcCC-------CCCcEEEeeeeeC----CccEEEEeccCCCHHHHHHHh-cCCCCHH
Q psy2769           1 MKVEPV-RNPVQRLFWERNFYEKLHGA-------PGVPHVMGYGTSG----DYNILVMELLGPSLEDLFQYC-SKRFSLK   67 (257)
Q Consensus         1 ~k~~~~-~~~~~~~~~E~~~~~~l~~~-------~~i~~~~~~~~~~----~~~~~v~e~~~~~L~~~~~~~-~~~~~~~   67 (257)
                      |||.+. ....+....|+.+|++++.+       ..|++++|.|...    .++|+|+|++|.+|..++... -+.++..
T Consensus       108 lKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~  187 (590)
T KOG1290|consen  108 LKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLS  187 (590)
T ss_pred             EEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHH
Confidence            355444 34567889999999999743       4699999999764    489999999999999999976 4679999


Q ss_pred             HHHHHHHHHHHHHHHHH-hCCccccCCCCCceEeecc
Q psy2769          68 TVLMLADQMISRLEHVH-RKKIVHRDIKPDNFLMGVR  103 (257)
Q Consensus        68 ~~~~~~~~i~~~l~~lh-~~~i~H~dl~~~nili~~~  103 (257)
                      .+..|++|++.||.||| +.||+|.||||+|||+..+
T Consensus       188 ~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  188 CVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            99999999999999999 5699999999999999865

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.94  E-value=1e-25  Score=192.00  Aligned_cols=215  Identities=21%  Similarity=0.204  Sum_probs=147.1

Q ss_pred             ccHHHHHHHHHhcCCC----CCcEEEeeeee--------CCccEEEEecc-CCCHHHHHHHhc-----------------
Q psy2769          12 RLFWERNFYEKLHGAP----GVPHVMGYGTS--------GDYNILVMELL-GPSLEDLFQYCS-----------------   61 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~----~i~~~~~~~~~--------~~~~~~v~e~~-~~~L~~~~~~~~-----------------   61 (257)
                      ....|+.++.++++++    +++++++++..        .+..++|+||+ +++|.+++....                 
T Consensus       218 ~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l  297 (507)
T PLN03224        218 TGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKI  297 (507)
T ss_pred             hhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCch
Confidence            3445777888887333    23566666643        34689999999 999999886321                 


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCC
Q psy2769          62 ------KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG  135 (257)
Q Consensus        62 ------~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~  135 (257)
                            ..++...+..++.|++.||.++|+.+++|+||||+||+++.+   +.++|+|||++.........  .......
T Consensus       298 ~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~---~~~kL~DFGla~~~~~~~~~--~~~~g~~  372 (507)
T PLN03224        298 PDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVD---GQVKIIDFGAAVDMCTGINF--NPLYGML  372 (507)
T ss_pred             hhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCC---CcEEEEeCcCccccccCCcc--CccccCC
Confidence                  123556788999999999999999999999999999999866   78999999998654332111  1122345


Q ss_pred             cccccChhHhcCCCC----------------------CCcchHHHHHHHHHHHHhCCC-CCCCCCCccHHH-H----HHH
Q psy2769         136 TARYASVNAHQWLDQ----------------------SPRDDLEALCYTLVYFLRGKL-PWQSIKSDNEET-R----MQR  187 (257)
Q Consensus       136 ~~~~~aPE~~~~~~~----------------------~~~~Dv~slg~~l~~l~~g~~-p~~~~~~~~~~~-~----~~~  187 (257)
                      ++.|+|||.+.....                      ..+.|+||+||++++|++|.. ||......+... .    ...
T Consensus       373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~  452 (507)
T PLN03224        373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNR  452 (507)
T ss_pred             CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHH
Confidence            789999998854321                      234799999999999999875 776432211110 0    000


Q ss_pred             HHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCC---CCCCChHHHHH
Q psy2769         188 VTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAF---SEEPNYGKLRD  231 (257)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p---~~Rp~~~~~~~  231 (257)
                      .................++...+++.+||..+|   .+|+|++++++
T Consensus       453 ~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        453 WRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             HHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            000000011111235678889999999999765   78999999874

>KOG1167|consensus

Probab=99.94  E-value=2.2e-26  Score=183.88  Aligned_cols=219  Identities=21%  Similarity=0.298  Sum_probs=166.1

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      .+...++.+|++++..+.|+.||.++.+++-.++..++|+||+ .....+++.    .++...+..+++.++.||.++|+
T Consensus        75 ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~  150 (418)
T KOG1167|consen   75 TSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHK  150 (418)
T ss_pred             ccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhc
Confidence            3456789999999999999999999999999999999999999 777777777    47789999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCccee-----------------cCC-CC-----------------------
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD-----------------FCP-NC-----------------------  124 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~-----------------~~~-~~-----------------------  124 (257)
                      .||+||||||.|++.+.  ..+.-.|+|||++..                 ..+ ..                       
T Consensus       151 ~GIvHRDiKpsNFL~n~--~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~  228 (418)
T KOG1167|consen  151 NGIVHRDIKPSNFLYNR--RTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCND  228 (418)
T ss_pred             cCccccCCCcccccccc--ccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCC
Confidence            99999999999999984  346789999999871                 111 00                       


Q ss_pred             CCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHHHH------H-----
Q psy2769         125 PPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPWQSIKSDNE-ETRMQRVTE------M-----  191 (257)
Q Consensus       125 ~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~------~-----  191 (257)
                      ........+.||+.|.|||++...+ .+.+.||||.|+++.-++++..||....++.. ...+..+..      .     
T Consensus       229 ~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g  308 (418)
T KOG1167|consen  229 GRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPG  308 (418)
T ss_pred             CccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCC
Confidence            0000112456999999999997765 58899999999999999999999876544321 000000000      0     


Q ss_pred             H---------------------------hh-----CChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         192 K---------------------------LT-----MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       192 ~---------------------------~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .                           .+     ..........|..+.+++++|+..||.+|+++++.+.
T Consensus       309 ~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  309 RILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             ceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence            0                           00     0011112234558999999999999999999998864

>KOG0576|consensus

Probab=99.94  E-value=2.3e-27  Score=198.91  Aligned_cols=211  Identities=18%  Similarity=0.203  Sum_probs=171.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+-++...+ ||||+.+++.+......++.|||| ||+|.+... ....+++.++...+++.+.|++|||..|
T Consensus        55 d~~~iqqei~~~~dc~-h~nivay~gsylr~dklwicMEycgggslQdiy~-~TgplselqiayvcRetl~gl~ylhs~g  132 (829)
T KOG0576|consen   55 DFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYH-VTGPLSELQIAYVCRETLQGLKYLHSQG  132 (829)
T ss_pred             cccccccceeeeecCC-CcChHHHHhhhhhhcCcEEEEEecCCCcccceee-ecccchhHHHHHHHhhhhccchhhhcCC
Confidence            4567889999999998 999999999999999999999999 999988777 3678999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh---cCCCCCCcchHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH---QWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~---~~~~~~~~~Dv~slg~~l~  164 (257)
                      =.|||||-.||+++..   |-+|+.|||.+..++......   ..+.||+.|+|||+.   +...+...+|||++|+...
T Consensus       133 k~hRdiKGanilltd~---gDvklaDfgvsaqitati~Kr---ksfiGtpywmapEvaaverkggynqlcdiwa~gitAi  206 (829)
T KOG0576|consen  133 KIHRDIKGANILLTDE---GDVKLADFGVSAQITATIAKR---KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAI  206 (829)
T ss_pred             cccccccccceeeccc---CceeecccCchhhhhhhhhhh---hcccCCccccchhHHHHHhcccccccccccccccchh
Confidence            9999999999999766   889999999987765543222   678899999999986   4557899999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      |+..-++|.....+-..   +.-..+.....+..+-...+++.|+++++.++..+|.+||+++.++
T Consensus       207 el~eLqpplfdlhpmr~---l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL  269 (829)
T KOG0576|consen  207 ELGELQPPLFDLHPMRA---LFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLL  269 (829)
T ss_pred             hhhhcCCcccccchHHH---HHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence            99877777665432221   1111111111122222356889999999999999999999998764

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.93  E-value=8e-25  Score=170.11  Aligned_cols=161  Identities=27%  Similarity=0.346  Sum_probs=138.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+..+..+. |++++++++++......++++|++ +++|.+++......++...+..++.+++.++.++|+.+
T Consensus        40 ~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  118 (225)
T smart00221       40 QREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG  118 (225)
T ss_pred             HHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4568899999999997 999999999999888999999999 77999999853322899999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh-cCCCCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH-QWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~-~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+|++|.||+++.+   +.++|+|||.+.........  ......++..|++||.. .....+.++|+|++|+++++|
T Consensus       119 i~h~di~~~ni~v~~~---~~~~l~d~g~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l  193 (225)
T smart00221      119 IVHRDLKPENILLGMD---GLVKLADFGLARFIHRDLAA--LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYEL  193 (225)
T ss_pred             eecCCCCHHHEEEcCC---CCEEEeeCceeeEecCcccc--cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHH
Confidence            9999999999999866   88999999998776543211  11345677889999998 666677899999999999999


Q ss_pred             HhCCCCCCC
Q psy2769         167 LRGKLPWQS  175 (257)
Q Consensus       167 ~~g~~p~~~  175 (257)
                      ++|+.||..
T Consensus       194 ~~g~~pf~~  202 (225)
T smart00221      194 LWGPEPFSG  202 (225)
T ss_pred             HHCCCCccc
Confidence            999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0590|consensus

Probab=99.92  E-value=3.9e-26  Score=198.50  Aligned_cols=214  Identities=15%  Similarity=0.188  Sum_probs=170.1

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD   92 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~d   92 (257)
                      +..|+.+-.++. |||++...+.+.......-.||||.++|+.++.. ...++..++..++.|++.|+.|+|+.|+.|+|
T Consensus       368 i~sE~~i~~~l~-h~~~~e~l~~~~~~~~~~~~mE~~~~Dlf~~~~~-~~~~~~~e~~c~fKqL~~Gv~y~h~~Giahrd  445 (601)
T KOG0590|consen  368 ITSEFCIGSSLS-HPNIIETLDIVQEIDGILQSMEYCPYDLFSLVMS-NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRD  445 (601)
T ss_pred             hhhheeeccccc-CCchhhhHHHHhhcccchhhhhcccHHHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhcCceecc
Confidence            455666666677 9999888777665554444599993399999984 45799999999999999999999999999999


Q ss_pred             CCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-CCCccCCCCcccccChhHhcCCCCC-CcchHHHHHHHHHHHHhCC
Q psy2769          93 IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLTGTARYASVNAHQWLDQS-PRDDLEALCYTLVYFLRGK  170 (257)
Q Consensus        93 l~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~-~~~Dv~slg~~l~~l~~g~  170 (257)
                      +|++|+++..+   |.+||+|||.+..+...... ........|...|+|||.+.+..+. ...||||.|+++..|.+|+
T Consensus       446 lK~enll~~~~---g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~  522 (601)
T KOG0590|consen  446 LKLENLLVTEN---GILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGR  522 (601)
T ss_pred             CccccEEEecC---CceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCC
Confidence            99999999887   89999999998776654332 1222567899999999999999885 4789999999999999999


Q ss_pred             CCCCCCCCccHH-HHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         171 LPWQSIKSDNEE-TRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       171 ~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .||......+.. .......+......+..+...+|...+.+|.+||+.+|.+|.|+++|++
T Consensus       523 ~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  523 FPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             CccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            999886655432 1222222333334455566788999999999999999999999999875

>KOG0195|consensus

Probab=99.90  E-value=1.4e-23  Score=159.82  Aligned_cols=208  Identities=12%  Similarity=0.129  Sum_probs=163.4

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK--   87 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~--   87 (257)
                      .|..|.-.+..+. ||||..+++.|....++.++..|+ .+||+.++... +--.+-.++.+++.+++.|++|||+..  
T Consensus       233 dfneefp~lrifs-hpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~  311 (448)
T KOG0195|consen  233 DFNEEFPALRIFS-HPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPM  311 (448)
T ss_pred             hhhhhCcceeeec-CCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchh
Confidence            4666776666666 999999999999999999999999 99999999964 334667799999999999999999875  


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCC---CcchHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS---PRDDLEALCYTLV  164 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~---~~~Dv~slg~~l~  164 (257)
                      |..--++...++++.+ -+.++...|-.++...          ....-.+.|++||.+...+.+   ..+|+|||++++|
T Consensus       312 ipr~~lns~hvmided-ltarismad~kfsfqe----------~gr~y~pawmspealqrkped~n~raadmwsfaillw  380 (448)
T KOG0195|consen  312 IPRFYLNSKHVMIDED-LTARISMADTKFSFQE----------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLW  380 (448)
T ss_pred             hhhhhcccceEEecch-hhhheecccceeeeec----------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHH
Confidence            4455688889999875 2234445554443221          334457899999999877543   4799999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      |+.|.+.||....+-+.      ..+.........+++++++.+.+++..|++-||.+||.++.++-.|+++.
T Consensus       381 el~trevpfadlspmec------gmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  381 ELNTREVPFADLSPMEC------GMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HhhccccccccCCchhh------hhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            99999999998765432      22223334455666899999999999999999999999999999999874

>KOG4158|consensus

Probab=99.88  E-value=8.2e-22  Score=157.36  Aligned_cols=204  Identities=16%  Similarity=0.162  Sum_probs=151.9

Q ss_pred             hcCCCCCcEEEeeeee---------------------------CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHH
Q psy2769          23 LHGAPGVPHVMGYGTS---------------------------GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQ   75 (257)
Q Consensus        23 l~~~~~i~~~~~~~~~---------------------------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~   75 (257)
                      |..||||+.+.++|.+                           ...+|+||.....||.+++.  ....+.....-++.|
T Consensus       272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~--~~~~s~r~~~~~laQ  349 (598)
T KOG4158|consen  272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLW--TRHRSYRTGRVILAQ  349 (598)
T ss_pred             cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHh--cCCCchHHHHHHHHH
Confidence            4469999999987743                           23579999999999999999  466889999999999


Q ss_pred             HHHHHHHHHhCCccccCCCCCceEeeccCC-CCeEEEEeCCcceecCCCC---CCCCCccCCCCcccccChhHhcCCCC-
Q psy2769          76 MISRLEHVHRKKIVHRDIKPDNFLMGVREN-FNTVYLVDFGLAVDFCPNC---PPRIRTRGLTGTARYASVNAHQWLDQ-  150 (257)
Q Consensus        76 i~~~l~~lh~~~i~H~dl~~~nili~~~~~-~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~~aPE~~~~~~~-  150 (257)
                      +++|+.|||++|+.|||+|++||++..+++ -..+.+.|||++---....   +-.......-|....+|||+....+- 
T Consensus       350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp  429 (598)
T KOG4158|consen  350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP  429 (598)
T ss_pred             HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence            999999999999999999999999987633 3478999999864322211   11111123447778899999876542 


Q ss_pred             -----CCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         151 -----SPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       151 -----~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                           ..++|.|+.|.+.||+++...||...-.-.. +.... .+    ...+.+++.+|+.+++++..+|+.||.+|++
T Consensus       430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L-~~r~Y-qe----~qLPalp~~vpp~~rqlV~~lL~r~pskRvs  503 (598)
T KOG4158|consen  430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL-DTRTY-QE----SQLPALPSRVPPVARQLVFDLLKRDPSKRVS  503 (598)
T ss_pred             ceeeccchhhhhhhhhhHHHHhccCCcccccchhee-chhhh-hh----hhCCCCcccCChHHHHHHHHHhcCCccccCC
Confidence                 3589999999999999999999987221111 10011 11    1234455789999999999999999999998


Q ss_pred             hHHHHHHHH
Q psy2769         226 YGKLRDSFR  234 (257)
Q Consensus       226 ~~~~~~~l~  234 (257)
                      ..-..+-+.
T Consensus       504 p~iAANvl~  512 (598)
T KOG4158|consen  504 PNIAANVLN  512 (598)
T ss_pred             ccHHHhHHH
Confidence            765444433

>KOG1023|consensus

Probab=99.88  E-value=2.5e-22  Score=167.84  Aligned_cols=215  Identities=16%  Similarity=0.192  Sum_probs=168.8

Q ss_pred             HHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCCCCce
Q psy2769          21 EKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI-VHRDIKPDNF   98 (257)
Q Consensus        21 ~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-~H~dl~~~ni   98 (257)
                      +.+. |.|+.+++|.+..+...++|.+|| .|+|.|.+......++.-....+.++++.||.|+|..-+ +|+.++..|+
T Consensus         2 ~~l~-h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    2 RQLD-HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             cccc-hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            3455 999999999999999999999999 999999999767778888999999999999999997765 9999999999


Q ss_pred             EeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-------CCCcchHHHHHHHHHHHHhCCC
Q psy2769          99 LMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-------QSPRDDLEALCYTLVYFLRGKL  171 (257)
Q Consensus        99 li~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-------~~~~~Dv~slg~~l~~l~~g~~  171 (257)
                      +++..   ..+|++|||+....... ..............|.|||.+.+..       .+.++|+||+|++++|+++.+.
T Consensus        81 lvd~~---w~lklt~~Gl~~~~~~~-~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~  156 (484)
T KOG1023|consen   81 LVDSR---WVLKLTDFGLNSLLEET-AEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG  156 (484)
T ss_pred             eeeee---EEEEechhhhccccccc-ccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence            99877   89999999997655321 0111112233566899999997752       3677999999999999999999


Q ss_pred             CCCCCCCc-cHHHHHHHHHHHHhhCChhhhh--cCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         172 PWQSIKSD-NEETRMQRVTEMKLTMTPEAIC--EGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       172 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ||...... +..+.+.++.........|.+.  ...++.+..+++.||..+|..||+++++...++.+.+..
T Consensus       157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~  228 (484)
T KOG1023|consen  157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG  228 (484)
T ss_pred             ccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence            99885433 2345555555522222222222  146667999999999999999999999999888887754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.86  E-value=1.1e-19  Score=148.81  Aligned_cols=220  Identities=24%  Similarity=0.307  Sum_probs=167.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS--KRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+|+.++..+..+++++.+.+.+......+++++++ ++++.+++....  ..++......+..|++.++.++|+.
T Consensus        41 ~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~  120 (384)
T COG0515          41 VERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK  120 (384)
T ss_pred             HHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            5678999999999994448999999997777789999999 999997777432  2799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCC-eEEEEeCCcceecCCCCCCCC---CccCCCCcccccChhHhcC---CCCCCcchHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFN-TVYLVDFGLAVDFCPNCPPRI---RTRGLTGTARYASVNAHQW---LDQSPRDDLEAL  159 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~-~~~l~df~~~~~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~---~~~~~~~Dv~sl  159 (257)
                      |++|+|+||.||+++..   + .++++|||.+...........   ......++..|++||.+.+   ...+...|+|++
T Consensus       121 ~~~hrd~kp~nil~~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~  197 (384)
T COG0515         121 GIIHRDIKPENILLDRD---GRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSL  197 (384)
T ss_pred             CeeccCCCHHHeeecCC---CCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHH
Confidence            99999999999999865   5 799999999875544332211   2366789999999999988   567889999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCc-cHHHHHHHHHHHHhhCChhhhhcCC----cHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         160 CYTLVYFLRGKLPWQSIKSD-NEETRMQRVTEMKLTMTPEAICEGT----PPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      |++++++++|..||...... ........+.....+..........    ...+.+++..++..+|..|.+.......
T Consensus       198 g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         198 GITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            99999999999997765431 1122222222222110011111111    2578999999999999999988766554

>KOG0603|consensus

Probab=99.83  E-value=4.6e-21  Score=160.91  Aligned_cols=212  Identities=21%  Similarity=0.249  Sum_probs=170.0

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      ....|-.++..++++|+++++.-.+..+...+++.++. |+.+...+.. ...+++.....+...++-++.++|+.|+++
T Consensus        42 ~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiy  120 (612)
T KOG0603|consen   42 HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAY  120 (612)
T ss_pred             ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence            56778889999999999999999999999999999999 8887776663 556888888899999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGK  170 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~  170 (257)
                      +|+|++||+++.+   |.+++.|||.++.....       ....|+..|+|||+.+  +....+|.||+|++.++|++|.
T Consensus       121 rd~k~enilld~~---Ghi~~tdfglske~v~~-------~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~  188 (612)
T KOG0603|consen  121 RDYKLENVLLLLE---GHIKLTDFGLSKEAVKE-------KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGT  188 (612)
T ss_pred             hcccccceeeccc---CccccCCchhhhHhHhh-------hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCC
Confidence            9999999999877   89999999998765443       2227899999999999  4567899999999999999999


Q ss_pred             CCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh--HHHHHHHHHHHHhccccCCCCC
Q psy2769         171 LPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY--GKLRDSFRNLLENKERCEFDLR  248 (257)
Q Consensus       171 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~--~~~~~~l~~~~~~~~~~~~~~~  248 (257)
                      .||..       +...+|...+..++     ...+....+++++++..+|..|.-.  +.+.+..+        ..+-..
T Consensus       189 ~pf~~-------~~~~~Il~~~~~~p-----~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~--------h~f~~~  248 (612)
T KOG0603|consen  189 LPFGG-------DTMKRILKAELEMP-----RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQ--------HEFFQS  248 (612)
T ss_pred             CCCch-------HHHHHHhhhccCCc-----hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhc--------cchhee
Confidence            99997       22333443333333     5677889999999999999999744  33333322        224455


Q ss_pred             cccccccc
Q psy2769         249 YDWTLLER  256 (257)
Q Consensus       249 ~~~~~~~~  256 (257)
                      .||..++.
T Consensus       249 i~~~~l~~  256 (612)
T KOG0603|consen  249 IDWNELEA  256 (612)
T ss_pred             eeHhhHhh
Confidence            67766554

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.82  E-value=1.2e-20  Score=148.83  Aligned_cols=162  Identities=22%  Similarity=0.272  Sum_probs=110.0

Q ss_pred             ccEEEEeccCCCHHHHHHHh---cCC---CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeC
Q psy2769          41 YNILVMELLGPSLEDLFQYC---SKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDF  114 (257)
Q Consensus        41 ~~~~v~e~~~~~L~~~~~~~---~~~---~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df  114 (257)
                      +.+++|+.+.++|.+++...   ...   ........+..|++..+++||..|++|+||+|+|++++.+   |.++|+||
T Consensus       113 n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~---G~v~Lg~F  189 (288)
T PF14531_consen  113 NRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQD---GGVFLGDF  189 (288)
T ss_dssp             SEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TT---S-EEE--G
T ss_pred             hhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCC---CCEEEcCh
Confidence            35788888899999887642   221   2234456677999999999999999999999999999877   99999999


Q ss_pred             CcceecCCCCCCCCCccCCCCcccccChhHhcCC--------CCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH
Q psy2769         115 GLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL--------DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQ  186 (257)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--------~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~  186 (257)
                      +.....+...      .....+..|.+||.....        .++.+.|.|+||+++|.|++|..||...........  
T Consensus       190 ~~~~r~g~~~------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~--  261 (288)
T PF14531_consen  190 SSLVRAGTRY------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW--  261 (288)
T ss_dssp             GGEEETTEEE------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG--
T ss_pred             HHHeecCcee------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc--
Confidence            9887654421      113345778999977432        457889999999999999999999997544321111  


Q ss_pred             HHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         187 RVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                                .-..+..+|+.++.||+.+|+.+|.+|
T Consensus       262 ----------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 ----------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             ----------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             ----------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence                      111224788999999999999999987

>KOG1240|consensus

Probab=99.82  E-value=1.4e-20  Score=166.34  Aligned_cols=200  Identities=16%  Similarity=0.120  Sum_probs=144.4

Q ss_pred             HHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEe
Q psy2769          21 EKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM  100 (257)
Q Consensus        21 ~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili  100 (257)
                      ..+..+||...+.-...++.-.|+|-+|...+|+|.+.. ..-+..-+.+-++.|++.||.-.|+.||+|||||.+||++
T Consensus        75 ~~l~~~pn~lPfqk~~~t~kAAylvRqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILi  153 (1431)
T KOG1240|consen   75 FALMKAPNCLPFQKVLVTDKAAYLVRQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILI  153 (1431)
T ss_pred             HHhhcCCcccchHHHHHhhHHHHHHHHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEE
Confidence            344559999999888888888999999999999999984 3346677888999999999999999999999999999999


Q ss_pred             eccCCCCeEEEEeCCcceecCCCC--CCCCCc--cCCCCcccccChhHhcCC----------C-CCCcchHHHHHHHHHH
Q psy2769         101 GVRENFNTVYLVDFGLAVDFCPNC--PPRIRT--RGLTGTARYASVNAHQWL----------D-QSPRDDLEALCYTLVY  165 (257)
Q Consensus       101 ~~~~~~~~~~l~df~~~~~~~~~~--~~~~~~--~~~~~~~~~~aPE~~~~~----------~-~~~~~Dv~slg~~l~~  165 (257)
                      ++=   .-+.|+||...+..-...  +....-  -+......|.|||.+...          + .+++-||||+||++.|
T Consensus       154 TSW---NW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaE  230 (1431)
T KOG1240|consen  154 TSW---NWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAE  230 (1431)
T ss_pred             eee---chhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHH
Confidence            864   678999998764322211  110000  012244589999987542          1 4678999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcC-CcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEG-TPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +++ |++||.--   .   .... ..+. ...++..... -+..++++|..|++.||++|.++++.++.
T Consensus       231 Lf~Eg~PlF~LS---Q---L~aY-r~~~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  231 LFLEGRPLFTLS---Q---LLAY-RSGN-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHhcCCCcccHH---H---HHhH-hccC-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            998 78888631   0   0000 0000 1111111111 12369999999999999999999998875

>KOG1033|consensus

Probab=99.78  E-value=2.4e-19  Score=147.92  Aligned_cols=171  Identities=23%  Similarity=0.310  Sum_probs=131.2

Q ss_pred             ccEEEEecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcc
Q psy2769          41 YNILVMELL-GPSLEDLFQYC--SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA  117 (257)
Q Consensus        41 ~~~~v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~  117 (257)
                      ++++.|++| ..+|.+++..+  ....+......++.|+..|+.|   +|.+|+|++|.||++..+   ..++|+|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d---~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDD---DQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccc---hhhhhhhhhhe
Confidence            689999999 99999999743  3456677899999999999999   999999999999999766   78999999998


Q ss_pred             eecCCCC---CCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh
Q psy2769         118 VDFCPNC---PPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT  194 (257)
Q Consensus       118 ~~~~~~~---~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  194 (257)
                      .......   +........+||..|++||.+.+..++.++|||+||++++|++.   +|..     ..+...........
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~---~f~T-----~~er~~t~~d~r~g  475 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI---QFST-----QFERIATLTDIRDG  475 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH---Hhcc-----HHHHHHhhhhhhcC
Confidence            7654432   12223356689999999999999999999999999999999985   2221     22222222222333


Q ss_pred             CChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         195 MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       195 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      ..++.+..++|. -.+++.+++...|..||++
T Consensus       476 ~ip~~~~~d~p~-e~~ll~~lls~~p~~RP~~  506 (516)
T KOG1033|consen  476 IIPPEFLQDYPE-EYTLLQQLLSPSPEERPSA  506 (516)
T ss_pred             CCChHHhhcCcH-HHHHHHHhcCCCcccCchH
Confidence            334445455555 5789999999999999933

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.77  E-value=2.9e-18  Score=128.92  Aligned_cols=149  Identities=19%  Similarity=0.153  Sum_probs=111.5

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      .+.+|++++++|.+++++++++++    +..+++|+|+ |.+|.+....        ....++.|+..+|.++|+.|++|
T Consensus        47 l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvH  114 (218)
T PRK12274         47 LARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAH  114 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCcc
Confidence            578999999999878999999996    3468999999 8888654321        11346789999999999999999


Q ss_pred             cCC-CCCceEeeccCCCCeEEEEeCCcceecCCCCCC----C-CC-----ccCCCCcccccChhHhcCC-CCC-CcchHH
Q psy2769          91 RDI-KPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP----R-IR-----TRGLTGTARYASVNAHQWL-DQS-PRDDLE  157 (257)
Q Consensus        91 ~dl-~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~----~-~~-----~~~~~~~~~~~aPE~~~~~-~~~-~~~Dv~  157 (257)
                      +|| ||.||+++.+   +.++|+|||++.........    . ..     ......++.+++|+...-. ..+ ...+.+
T Consensus       115 rDL~kp~NILv~~~---g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~  191 (218)
T PRK12274        115 NDLAKEANWLVQED---GSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWF  191 (218)
T ss_pred             CCCCCcceEEEcCC---CCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHH
Confidence            999 7999999765   78999999999865433210    0 00     0112356778888765443 223 467888


Q ss_pred             HHHHHHHHHHhCCCCCCC
Q psy2769         158 ALCYTLVYFLRGKLPWQS  175 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~  175 (257)
                      +.|+-+|.++|+..+.-+
T Consensus       192 ~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        192 ATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HhcchHHHHHhccCCccc
Confidence            999999999998877654

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.76  E-value=1.2e-18  Score=133.51  Aligned_cols=126  Identities=13%  Similarity=0.200  Sum_probs=96.7

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeC--------CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSG--------DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~--------~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      +.+|+..+.++. ||+|+.+.+++...        ...+++|||+ |.+|.+...     +++    ....++..++..+
T Consensus        82 ~e~Ea~~l~rL~-~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~l  151 (232)
T PRK10359         82 YENLIVQTDRVR-SEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESL  151 (232)
T ss_pred             HHHHHHHHHHHH-HCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHH
Confidence            579999999998 99999999986643        3578999999 889987643     333    2456899999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.|++|||++|.|++++.+   + ++++|||.........          .     ...+.....+..++|+|+||+++
T Consensus       152 H~~gi~H~Dikp~Nili~~~---g-i~liDfg~~~~~~e~~----------a-----~d~~vler~y~~~~di~~lg~~~  212 (232)
T PRK10359        152 HQHGMVSGDPHKGNFIVSKN---G-LRIIDLSGKRCTAQRK----------A-----KDRIDLERHYGIKNEIKDLGYYL  212 (232)
T ss_pred             HHcCCccCCCChHHEEEeCC---C-EEEEECCCcccccchh----------h-----HHHHHHHhHhcccccccceeEee
Confidence            99999999999999999865   6 9999999875431110          0     01133444566789999999988


Q ss_pred             HHHH
Q psy2769         164 VYFL  167 (257)
Q Consensus       164 ~~l~  167 (257)
                      ..+.
T Consensus       213 ~~~~  216 (232)
T PRK10359        213 LIYK  216 (232)
T ss_pred             hHHH
Confidence            7653

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.75  E-value=3.8e-18  Score=140.14  Aligned_cols=123  Identities=23%  Similarity=0.198  Sum_probs=92.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCc-EEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVP-HVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~-~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+++++++. |++++ .++++    +..++||||+ |++|.. ..  .  ..   ...++.+++.+|.++|+.|
T Consensus        65 ~~~~~~E~~iL~~L~-h~~iv~~l~~~----~~~~LVmE~~~G~~L~~-~~--~--~~---~~~~~~~i~~aL~~lH~~g  131 (365)
T PRK09188         65 RHLAAREIRALKTVR-GIGVVPQLLAT----GKDGLVRGWTEGVPLHL-AR--P--HG---DPAWFRSAHRALRDLHRAG  131 (365)
T ss_pred             HHHHHHHHHHHHhcc-CCCCCcEEEEc----CCcEEEEEccCCCCHHH-hC--c--cc---hHHHHHHHHHHHHHHHHCC
Confidence            456899999999998 88876 55553    3579999999 888862 21  1  11   1467899999999999999


Q ss_pred             ccccCC-CCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC-----CccCCCCcccccChhHhcCC
Q psy2769          88 IVHRDI-KPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI-----RTRGLTGTARYASVNAHQWL  148 (257)
Q Consensus        88 i~H~dl-~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~-----~~~~~~~~~~~~aPE~~~~~  148 (257)
                      |+|||| ||+||+++.+   +.++|+|||++..+........     ......+++.|.+||.+...
T Consensus       132 IiHrDL~KP~NILv~~~---~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~  195 (365)
T PRK09188        132 ITHNDLAKPQNWLMGPD---GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR  195 (365)
T ss_pred             CeeCCCCCcceEEEcCC---CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence            999999 9999999755   7899999999987655431111     11244577788999988544

>PRK10345 hypothetical protein; Provisional

Probab=99.69  E-value=2.9e-16  Score=119.90  Aligned_cols=105  Identities=18%  Similarity=0.292  Sum_probs=84.0

Q ss_pred             cccccHHHHHHHHHhc----CCCCCcEEEeeeeeCC---c-cEEEEec--c-CCCHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLH----GAPGVPHVMGYGTSGD---Y-NILVMEL--L-GPSLEDLFQYCSKRFSLKTVLMLADQMI   77 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~----~~~~i~~~~~~~~~~~---~-~~~v~e~--~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~   77 (257)
                      ..+.+.+|+.++..+.    .||||++++++++++.   . +.+|+||  + ++||.+++..  ..+++.  ..++.+++
T Consensus        39 ~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~--~~~~e~--~~~~~~~L  114 (210)
T PRK10345         39 GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ--CRYEED--VAQLRQLL  114 (210)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc--ccccHh--HHHHHHHH
Confidence            3457999999999995    3899999999998863   3 3378999  4 5899999974  346655  35678888


Q ss_pred             HHH-HHHHhCCccccCCCCCceEeeccC-CCCeEEEEe-CCcc
Q psy2769          78 SRL-EHVHRKKIVHRDIKPDNFLMGVRE-NFNTVYLVD-FGLA  117 (257)
Q Consensus        78 ~~l-~~lh~~~i~H~dl~~~nili~~~~-~~~~~~l~d-f~~~  117 (257)
                      .++ .|||+.+|+|+||||+||+++... +...++|+| ||..
T Consensus       115 ~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345        115 KKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             HHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            777 899999999999999999998643 335899999 4543

>KOG0606|consensus

Probab=99.69  E-value=5.7e-17  Score=143.41  Aligned_cols=145  Identities=24%  Similarity=0.269  Sum_probs=113.5

Q ss_pred             HHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC------------CCCCccCCCCcccccChh
Q psy2769          76 MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP------------PRIRTRGLTGTARYASVN  143 (257)
Q Consensus        76 i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~------------~~~~~~~~~~~~~~~aPE  143 (257)
                      ++.++.|+|..||+|+|+||+|.+|..-   |.+|++|||+.+.......            .........||+.|.|||
T Consensus       152 mvla~Eylh~ygivhrdlkpdnllIT~m---GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe  228 (1205)
T KOG0606|consen  152 MVLAVEYLHSYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE  228 (1205)
T ss_pred             hhHHhHhhccCCeecCCCCCCcceeeec---ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChh
Confidence            3778999999999999999999999876   9999999999765433221            111113347999999999


Q ss_pred             HhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       144 ~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      ++.-..|+...|.|++|+++|+.+.|+.||.+.   ...+.+..+....  ..+++--..++++.++++.++|.++|..|
T Consensus       229 VilrqgygkpvdwwamGiIlyeFLVgcvpffGd---tpeelfg~visd~--i~wpE~dea~p~Ea~dli~~LL~qnp~~R  303 (1205)
T KOG0606|consen  229 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD---TPEELFGQVISDD--IEWPEEDEALPPEAQDLIEQLLRQNPLCR  303 (1205)
T ss_pred             hhhhhccCCCccHHHHHHHHHHHheeeeeccCC---CHHHHHhhhhhhh--ccccccCcCCCHHHHHHHHHHHHhChHhh
Confidence            999999999999999999999999999999984   3444444443332  23333346788999999999999999999


Q ss_pred             C-ChHH
Q psy2769         224 P-NYGK  228 (257)
Q Consensus       224 p-~~~~  228 (257)
                      - +..+
T Consensus       304 lgt~ga  309 (1205)
T KOG0606|consen  304 LGTGGA  309 (1205)
T ss_pred             cccchh
Confidence            7 4433

>KOG1166|consensus

Probab=99.67  E-value=4.2e-16  Score=139.59  Aligned_cols=198  Identities=23%  Similarity=0.284  Sum_probs=146.8

Q ss_pred             CCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeecc--
Q psy2769          27 PGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR--  103 (257)
Q Consensus        27 ~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~--  103 (257)
                      +-|.++.......+--++|++|. .|||.+++. ..+.+++..++.++.|++..+..||..+|+||||||+|+++...  
T Consensus       754 ~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~  832 (974)
T KOG1166|consen  754 PSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREIC  832 (974)
T ss_pred             cchHHHHHHHccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccC
Confidence            34455555444455678999999 999999999 57889999999999999999999999999999999999999752  


Q ss_pred             --CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccH
Q psy2769         104 --ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNE  181 (257)
Q Consensus       104 --~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~  181 (257)
                        ++...++|+|||.+......... ..-....+|-.+-.+|...|.+|+..+|.|.++.+++-|+.|+.--  ..+...
T Consensus       833 ~~~~~~~l~lIDfG~siDm~lfp~~-~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--~~~g~~  909 (974)
T KOG1166|consen  833 ADSDSKGLYLIDFGRSIDMKLFPDG-TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--VKNGSS  909 (974)
T ss_pred             CCCcccceEEEecccceeeeEcCCC-cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--hcCCcc
Confidence              33457999999998765544322 2224567888999999999999999999999999999999885432  111110


Q ss_pred             HHHHHHHHHHHhhCChhhhhcCCc-HHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         182 ETRMQRVTEMKLTMTPEAICEGTP-PEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ......            +...+- .-..++...+|+.|-..=|.+.++...|++.+.+.
T Consensus       910 ~~~~~~------------~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~  957 (974)
T KOG1166|consen  910 WMVKTN------------FPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH  957 (974)
T ss_pred             eecccc------------chhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence            000000            000111 22667888888877777788899999888887754

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.66  E-value=6.9e-16  Score=116.66  Aligned_cols=98  Identities=20%  Similarity=0.228  Sum_probs=76.8

Q ss_pred             HHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCcccc
Q psy2769          14 FWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV-HRKKIVHR   91 (257)
Q Consensus        14 ~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~H~   91 (257)
                      ..|+..+.++. +++++....+...  ..++||||+ |+++..... ....++...+..++.|++.+|.++ |+.|++|+
T Consensus        67 ~~E~~~l~~l~-~~~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~-~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHr  142 (190)
T cd05147          67 EKEMRNLKRLV-TAGIPCPEPILLK--SHVLVMEFIGDDGWAAPRL-KDAPLSESKARELYLQVIQIMRILYQDCRLVHA  142 (190)
T ss_pred             HHHHHHHHHHH-HCCCCCCcEEEec--CCEEEEEEeCCCCCcchhh-hcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence            34999999998 6666433332222  248999999 655544432 246789999999999999999998 79999999


Q ss_pred             CCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          92 DIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        92 dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      ||||+||+++.    +.++|+|||++..
T Consensus       143 DlkP~NIli~~----~~v~LiDFG~a~~  166 (190)
T cd05147         143 DLSEYNLLYHD----GKLYIIDVSQSVE  166 (190)
T ss_pred             CCCHHHEEEEC----CcEEEEEcccccc
Confidence            99999999972    5799999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.63  E-value=2.7e-15  Score=113.74  Aligned_cols=99  Identities=21%  Similarity=0.276  Sum_probs=78.8

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcc
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDL-FQYCSKRFSLKTVLMLADQMISRLEHVHR-KKIV   89 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~   89 (257)
                      +..|...+.++. ++++.....+...  ..++||||+ |+++... +.  ...++...+..++.|++.++.++|. .|++
T Consensus        66 ~~~E~~~l~~l~-~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~--~~~~~~~~~~~i~~~l~~~l~~lH~~~giv  140 (190)
T cd05145          66 AEKEFRNLKRLY-EAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLK--DVPLEEEEAEELYEQVVEQMRRLYQEAGLV  140 (190)
T ss_pred             HHHHHHHHHHHH-hCCCCCceEEEec--CCEEEEEEecCCCchhhhhh--hccCCHHHHHHHHHHHHHHHHHHHHhCCEe
Confidence            467899999998 8876444333322  248999999 6544333 33  4567888999999999999999999 9999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceec
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDF  120 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~  120 (257)
                      |+||||+||+++ +   +.++|+|||++...
T Consensus       141 HrDlkP~NIll~-~---~~~~liDFG~a~~~  167 (190)
T cd05145         141 HGDLSEYNILYH-D---GKPYIIDVSQAVEL  167 (190)
T ss_pred             cCCCChhhEEEE-C---CCEEEEEcccceec
Confidence            999999999997 4   78999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0590|consensus

Probab=99.60  E-value=2.9e-17  Score=143.38  Aligned_cols=217  Identities=19%  Similarity=0.208  Sum_probs=170.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH-h
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSK-RFSLKTVLMLADQMISRLEHVH-R   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh-~   85 (257)
                      ...++..|..+-+.+.+|+|++.+++........+++.++. |+++.+.+..... ..+...+..++.|+..++.|+| .
T Consensus        63 ~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~  142 (601)
T KOG0590|consen   63 SSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE  142 (601)
T ss_pred             hhhhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcc
Confidence            34456668888888888999999999999999999999999 9999988832233 6777888999999999999999 9


Q ss_pred             CCccccCCCCCceEeeccCCCC-eEEEEeCCcceecCCCCCCCCCccCCCC-cccccChhHhcCC-CCCCcchHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFN-TVYLVDFGLAVDFCPNCPPRIRTRGLTG-TARYASVNAHQWL-DQSPRDDLEALCYT  162 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~-~~~~~aPE~~~~~-~~~~~~Dv~slg~~  162 (257)
                      .++.|+|++|+|.+++..   + .+++.|||++..+..............| ++.|.|||...+. ...+..|+||.|++
T Consensus       143 ~~~~h~~ikP~n~~l~~s---~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~  219 (601)
T KOG0590|consen  143 NGVTHRDIKPSNSLLDES---GSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIV  219 (601)
T ss_pred             cccccCCCCCccchhccC---CCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccc
Confidence            999999999999999876   5 8999999999887773233333356677 9999999999885 45788999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.-+++|..||.........  +......+ .......+..++....+++.+++..+|..|.+.+++..
T Consensus       220 l~~~~~g~~p~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  220 LSAMLTGELPWDFPSRKDGR--YSSWKSNK-GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             ccccccCCCCcccccccccc--ceeecccc-cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            99999999999886544321  11111111 11112223678888999999999999999999887743

>KOG1266|consensus

Probab=99.55  E-value=4.9e-15  Score=116.25  Aligned_cols=196  Identities=13%  Similarity=0.070  Sum_probs=138.9

Q ss_pred             HHHHHhcCCCCCcEEEeeeeeCC-----ccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC-
Q psy2769          18 NFYEKLHGAPGVPHVMGYGTSGD-----YNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHRKK-   87 (257)
Q Consensus        18 ~~~~~l~~~~~i~~~~~~~~~~~-----~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~-   87 (257)
                      +-+.++- |.||++++.|..+..     ...++.||+ .|++.+++++.   .+.+......+|+.||+.||.|||+.. 
T Consensus       119 dnllqlv-HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  119 DNLLQLV-HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHH-HHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            3445555 889999999887543     578999999 99999999864   567888999999999999999999775 


Q ss_pred             -ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCC---CCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          88 -IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNC---PPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        88 -i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                       ++|+++..+.|++..+   +.+|+.- +.-.....+.   .... .....+.+.|.+||.-.....+-.+|||++|+..
T Consensus       198 piihgnlTc~tifiq~n---gLIkig~-~ap~s~h~s~~~~~~~E-k~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA  272 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHN---GLIKIGS-VAPDSTHPSVNSTREAE-KSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA  272 (458)
T ss_pred             ccccCCcchhheeecCC---ceEEecc-cCccccchhhhhhhHhh-hhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence             9999999999999755   7666632 2111111111   1111 1234567889999987777778899999999999


Q ss_pred             HHHHhCCCC-CCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         164 VYFLRGKLP-WQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       164 ~~l~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      ++|..++.- -..-......+.+.++..+..           ..-=++++..|+.-.|..||++..++
T Consensus       273 lemailEiq~tnseS~~~~ee~ia~~i~~le-----------n~lqr~~i~kcl~~eP~~rp~ar~ll  329 (458)
T KOG1266|consen  273 LEMAILEIQSTNSESKVEVEENIANVIIGLE-----------NGLQRGSITKCLEGEPNGRPDARLLL  329 (458)
T ss_pred             HHHHHheeccCCCcceeehhhhhhhheeecc-----------CccccCcCcccccCCCCCCcchhhhh
Confidence            999877653 232222233333333322211           11135689999999999999998764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.54  E-value=5e-14  Score=107.64  Aligned_cols=96  Identities=26%  Similarity=0.435  Sum_probs=78.0

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .++.+|+.++..+. +++++....++......+++||++ |++|.+.+....  .      .++.+++.+|.++|+.|++
T Consensus        42 ~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~--~------~~~~~i~~~l~~lH~~gi~  112 (199)
T TIGR03724        42 ERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN--D------ELLREIGRLVGKLHKAGIV  112 (199)
T ss_pred             HHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH--H------HHHHHHHHHHHHHHHCCee
Confidence            45778999999998 665544444444556679999999 999998876311  1      7899999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      |+|++|.||+++ +   +.++++|||.+..
T Consensus       113 H~Dl~~~Nil~~-~---~~~~liDfg~a~~  138 (199)
T TIGR03724       113 HGDLTTSNIIVR-D---DKLYLIDFGLGKY  138 (199)
T ss_pred             cCCCCcceEEEE-C---CcEEEEECCCCcC
Confidence            999999999997 4   7899999998754

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.53  E-value=7.8e-14  Score=107.57  Aligned_cols=99  Identities=27%  Similarity=0.430  Sum_probs=84.2

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .++.+|+.++..+. +++++....++......+++|||+ |++|.+.+...    .. ....++.+++.+|.++|+.|++
T Consensus        44 ~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~----~~-~~~~i~~~i~~~l~~lH~~~i~  117 (211)
T PRK14879         44 ERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSN----GM-EELELSREIGRLVGKLHSAGII  117 (211)
T ss_pred             HHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhc----cH-HHHHHHHHHHHHHHHHHhCCcc
Confidence            35788999999998 888776666666667789999999 99999988732    12 7888999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      |+|++|.||+++ +   +.++++|||.+..
T Consensus       118 H~Dl~p~Nil~~-~---~~~~liDf~~a~~  143 (211)
T PRK14879        118 HGDLTTSNMILS-G---GKIYLIDFGLAEF  143 (211)
T ss_pred             cCCCCcccEEEE-C---CCEEEEECCcccC
Confidence            999999999997 3   6799999998743

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.53  E-value=1.2e-13  Score=108.23  Aligned_cols=100  Identities=20%  Similarity=0.293  Sum_probs=79.0

Q ss_pred             ccccHHHHHHHHHhcCCCCC--cEEEeeeeeC-C---ccEEEEecc-C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGV--PHVMGYGTSG-D---YNILVMELL-G-PSLEDLFQYCSKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i--~~~~~~~~~~-~---~~~~v~e~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ..++.+|+.++..|. +++|  +..+++.... .   ..++|+|++ | .+|.+++..  ..++...    +.+++.++.
T Consensus        84 ~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~----~~~i~~~l~  156 (239)
T PRK01723         84 RTRAFAEFRLLAQLY-EAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE--APLSEEQ----WQAIGQLIA  156 (239)
T ss_pred             hhHHHHHHHHHHHHH-hCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHH----HHHHHHHHH
Confidence            456888999999998 7664  6777764432 2   235999999 5 689888873  4455543    578999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      ++|+.||+|+||+|.||+++.+   +.++|+|||.+..
T Consensus       157 ~lH~~GI~HrDlkp~NILv~~~---~~v~LIDfg~~~~  191 (239)
T PRK01723        157 RFHDAGVYHADLNAHNILLDPD---GKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHCCCCCCCCCchhEEEcCC---CCEEEEECCCccc
Confidence            9999999999999999999765   6899999998754

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.50  E-value=1.2e-13  Score=120.66  Aligned_cols=95  Identities=27%  Similarity=0.485  Sum_probs=83.2

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +++.+|+.++..++ +++++....++......++||||+ |++|.+++.         ....++.+++.+|.++|+.|++
T Consensus       381 ~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~gii  450 (535)
T PRK09605        381 ERTRAEARLLSEAR-RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIV  450 (535)
T ss_pred             HHHHHHHHHHHhhc-ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCc
Confidence            46889999999998 899988877777777789999999 999998876         3467899999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      |||+||+||+++ +   +.++++|||++..
T Consensus       451 HrDlkp~NILl~-~---~~~~liDFGla~~  476 (535)
T PRK09605        451 HGDLTTSNFIVR-D---DRLYLIDFGLGKY  476 (535)
T ss_pred             cCCCChHHEEEE-C---CcEEEEeCccccc
Confidence            999999999993 3   6899999999854

>smart00090 RIO RIO-like kinase

Probab=99.47  E-value=2.5e-13  Score=106.22  Aligned_cols=99  Identities=21%  Similarity=0.293  Sum_probs=78.2

Q ss_pred             ccHHHHHHHHHhcC-CCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC-c
Q psy2769          12 RLFWERNFYEKLHG-APGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK-I   88 (257)
Q Consensus        12 ~~~~E~~~~~~l~~-~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-i   88 (257)
                      .+.+|+..+.++.. ...+++++++.    ..++|||++ |.+|...... ...+....+..++.|++.++.++|+.| +
T Consensus        96 ~~~~E~~~L~~L~~~~i~~p~~~~~~----~~~lV~E~~~g~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~g~i  170 (237)
T smart00090       96 WAEKEFRNLQRLYEAGVPVPKPIAWR----RNVLVMEFIGGDGLPAPRLK-DVEPEEEEEFELYDDILEEMRKLYKEGEL  170 (237)
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeeEec----CceEEEEEecCCcccccccc-cCCcchHHHHHHHHHHHHHHHHHHhcCCE
Confidence            35789999999973 24456666542    358999999 6677655431 344666677899999999999999999 9


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      +|+|++|+||+++ +   +.++++|||.+..
T Consensus       171 iH~Dikp~NIli~-~---~~i~LiDFg~a~~  197 (237)
T smart00090      171 VHGDLSEYNILVH-D---GKVVIIDVSQSVE  197 (237)
T ss_pred             EeCCCChhhEEEE-C---CCEEEEEChhhhc
Confidence            9999999999997 4   7899999998754

>KOG0601|consensus

Probab=99.44  E-value=2e-13  Score=115.09  Aligned_cols=213  Identities=17%  Similarity=0.124  Sum_probs=165.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHH----HHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMIS----RLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~----~l~~lh   84 (257)
                      ...+=.+|+...+++..|++.++.+..++.++..++-+|.|+.+|.++-......++...++..+.+...    |+.++|
T Consensus       160 ~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h  239 (524)
T KOG0601|consen  160 DSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH  239 (524)
T ss_pred             ccccccchhhcccccCccccccccCcccccCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccC
Confidence            3445677888889999899999989999999999999999998888887754555788888888999888    999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC--CCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP--RIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ..+++|.|++|.|++...+.  ...+++|||....+....-.  ........+...|++||..++ -++..+|+|++|.+
T Consensus       240 s~~~~~~~~kp~~i~~~~~~--~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev  316 (524)
T KOG0601|consen  240 SNNIVHDDLKPANIFTTSDW--TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEV  316 (524)
T ss_pred             CCcccccccchhheeccccc--ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhh
Confidence            99999999999999997553  67899999999887765411  111122367889999999888 45789999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.+..++..+.....+..       ..+......+.++..+.+..+...+..+++.+|..|+++..+.+
T Consensus       317 ~l~~~l~~~~~~~g~~~~-------W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  317 ILEAILGSHLPSVGKNSS-------WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             hHhhHhhcccccCCCCCC-------ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            999988766655432211       11111112444555667777888999999999999999887754

>KOG1243|consensus

Probab=99.44  E-value=4.1e-12  Score=108.61  Aligned_cols=146  Identities=13%  Similarity=0.083  Sum_probs=112.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH-RKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i   88 (257)
                      .+...+-++-++.++ ||+|+++++.++.++..|+|+|.+- .|..++..    ++.......+.||+.||.||| +.++
T Consensus        53 ~~~~~~A~k~lKtlR-HP~Il~yL~t~e~~~~~ylvTErV~-Pl~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~l  126 (690)
T KOG1243|consen   53 TELAKRAVKRLKTLR-HPNILSYLDTTEEEGTLYLVTERVR-PLETVLKE----LGKEEVCLGLFQILAALSFLNDDCNL  126 (690)
T ss_pred             hHHHHHHHHHhhhcc-CchhhhhhhhhcccCceEEEeeccc-cHHHHHHH----hHHHHHHHHHHHHHHHHHHHhccCCe
Confidence            345778889999999 9999999999999999999999972 34556663    336677888999999999997 7789


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+-+.|+++..   |..+|++|..+........   ..........|..|+.+....  ...|.|.||+++++++.
T Consensus       127 vHgNv~~~SVfVn~~---GeWkLggle~v~~~~~~~~---~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~n  198 (690)
T KOG1243|consen  127 VHGNVCKDSVFVNES---GEWKLGGLELVSKASGFNA---PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFN  198 (690)
T ss_pred             eeccEeeeeEEEcCC---CcEEEeeeEEEeccccCCc---ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhC
Confidence            999999999999887   9999999998765433321   112222333455665544333  34799999999999999


Q ss_pred             C
Q psy2769         169 G  169 (257)
Q Consensus       169 g  169 (257)
                      |
T Consensus       199 g  199 (690)
T KOG1243|consen  199 G  199 (690)
T ss_pred             c
Confidence            8

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.40  E-value=2e-12  Score=94.01  Aligned_cols=99  Identities=24%  Similarity=0.352  Sum_probs=83.5

Q ss_pred             ccccHHHHHHHHHhcCC-CCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-
Q psy2769          10 VQRLFWERNFYEKLHGA-PGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~-~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-   86 (257)
                      ...+.+|+.++..+.++ .++++++.++...+..++++|++ +.++..+        +......++.+++.+++.+|.. 
T Consensus        35 ~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~  106 (155)
T cd05120          35 GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLP  106 (155)
T ss_pred             hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCC
Confidence            45799999999999844 68999999988878899999999 6655432        4566677889999999999985 


Q ss_pred             --CccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          87 --KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        87 --~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                        +++|+|++|+||+++..   +.++++|||.+..
T Consensus       107 ~~~i~H~Dl~~~Nil~~~~---~~~~l~Df~~~~~  138 (155)
T cd05120         107 LLVLCHGDLHPGNILVDDG---KILGIIDWEYAGY  138 (155)
T ss_pred             ceEEEecCCCcceEEEECC---cEEEEEecccccC
Confidence              79999999999999864   7899999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.37  E-value=2.9e-12  Score=97.80  Aligned_cols=94  Identities=20%  Similarity=0.305  Sum_probs=75.0

Q ss_pred             ccHHHHHHHHHhcCCC--CCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          12 RLFWERNFYEKLHGAP--GVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~--~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ....|..++..+. ++  .++..++.    ...+++|||+ |++|.....       ......++.+++.++.++|+.|+
T Consensus        79 ~~~~E~~~l~~l~-~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~gi  146 (198)
T cd05144          79 AAQKEFAALKALY-EEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHGI  146 (198)
T ss_pred             HHHHHHHHHHHHH-HcCCCCCceeec----CCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCCC
Confidence            3678999999997 55  45555553    3468999999 888765432       13456788999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceec
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF  120 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~  120 (257)
                      +|+||+|+||+++.+   +.++++|||.+...
T Consensus       147 ~H~Dl~p~Nill~~~---~~~~liDfg~~~~~  175 (198)
T cd05144         147 IHGDLSEFNILVDDD---EKIYIIDWPQMVST  175 (198)
T ss_pred             CcCCCCcccEEEcCC---CcEEEEECCccccC
Confidence            999999999999765   89999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=99.29  E-value=9e-11  Score=95.79  Aligned_cols=202  Identities=13%  Similarity=0.193  Sum_probs=142.1

Q ss_pred             ccEEEEecc-C-CCHHHHHHHh--c---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEe
Q psy2769          41 YNILVMELL-G-PSLEDLFQYC--S---KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVD  113 (257)
Q Consensus        41 ~~~~v~e~~-~-~~L~~~~~~~--~---~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~d  113 (257)
                      .+.++|..+ | ..+..+++-.  .   ....+..+.+.++.++.+.+.||..|.+-||++++|++++.+   +.|.|.|
T Consensus        84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~---~~V~LVd  160 (637)
T COG4248          84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDD---SKVVLVD  160 (637)
T ss_pred             eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecC---ceEEEEc
Confidence            377888887 4 2333333221  1   236678899999999999999999999999999999999766   8899998


Q ss_pred             CCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcchHHHHHHHHHHHHhC-CCCCCCCCCccH----HH
Q psy2769         114 FGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDDLEALCYTLVYFLRG-KLPWQSIKSDNE----ET  183 (257)
Q Consensus       114 f~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slg~~l~~l~~g-~~p~~~~~~~~~----~~  183 (257)
                      -.......+    .+.....+|.+.|.+||.-+     +...+...|.|.||+++++++.| .+||.+......    .+
T Consensus       161 sDsfqi~~n----g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E  236 (637)
T COG4248         161 SDSFQINAN----GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLE  236 (637)
T ss_pred             ccceeeccC----CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcch
Confidence            776554322    12225568999999999865     44567889999999999998875 999988653321    11


Q ss_pred             HHHHHHHHHh--------hCCh---hhhhcCCcHHHHHHHHHHhcC--CCCCCCChHHHHHHHHHHHHhccccCCCCCcc
Q psy2769         184 RMQRVTEMKL--------TMTP---EAICEGTPPEFAEFLRYCRGL--AFSEEPNYGKLRDSFRNLLENKERCEFDLRYD  250 (257)
Q Consensus       184 ~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~li~~~l~~--~p~~Rp~~~~~~~~l~~~~~~~~~~~~~~~~~  250 (257)
                        ..|..+.+        ...+   ..=+.-+|+.+..+..+|+..  ++.-|||++.+..-|.++-.+...|+.+-.-.
T Consensus       237 --~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a~H~  314 (637)
T COG4248         237 --TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSAMHV  314 (637)
T ss_pred             --hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhccccc
Confidence              01111111        1111   111245788999999999954  46789999999998888888777666544333


Q ss_pred             c
Q psy2769         251 W  251 (257)
Q Consensus       251 ~  251 (257)
                      |
T Consensus       315 y  315 (637)
T COG4248         315 Y  315 (637)
T ss_pred             c
Confidence            4

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.27  E-value=2.4e-11  Score=91.38  Aligned_cols=98  Identities=18%  Similarity=0.279  Sum_probs=75.5

Q ss_pred             cHHHHHHHHHhcCC-CCCcEEEeeeeeCCccEEEEeccCCC-HH-HHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCc
Q psy2769          13 LFWERNFYEKLHGA-PGVPHVMGYGTSGDYNILVMELLGPS-LE-DLFQYCSKRFSLKTVLMLADQMISRLEHV-HRKKI   88 (257)
Q Consensus        13 ~~~E~~~~~~l~~~-~~i~~~~~~~~~~~~~~~v~e~~~~~-L~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i   88 (257)
                      .++|+..|+++... -++|+++++    ...++||||++++ +. ..++  ...++...+..+..+++.+|..+ |+.|+
T Consensus        73 a~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk--d~~~~~~~~~~i~~~i~~~l~~l~H~~gl  146 (197)
T cd05146          73 AEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK--DAKLNDEEMKNAYYQVLSMMKQLYKECNL  146 (197)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh--ccccCHHHHHHHHHHHHHHHHHHHHhCCe
Confidence            34899999999844 468888875    3578999999542 21 1222  23455667778889999999988 89999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceec
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF  120 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~  120 (257)
                      +|||+++.||++..    +.+.++|||.+...
T Consensus       147 VHGDLs~~NIL~~~----~~v~iIDF~qav~~  174 (197)
T cd05146         147 VHADLSEYNMLWHD----GKVWFIDVSQSVEP  174 (197)
T ss_pred             ecCCCCHHHEEEEC----CcEEEEECCCceeC
Confidence            99999999999963    57999999988654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG3087|consensus

Probab=99.24  E-value=9.5e-11  Score=85.45  Aligned_cols=109  Identities=22%  Similarity=0.244  Sum_probs=85.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCC--CHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGP--SLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~--~L~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      +++..+|++++.++. .-.|.--.-++.+...-+++|||..|  ++.+++...-.. ........++..+-..+.-||..
T Consensus        54 r~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n  132 (229)
T KOG3087|consen   54 RKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN  132 (229)
T ss_pred             HHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC
Confidence            467889999999998 44665555566666667899999944  888888865322 33333377888888899999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      +++||||..+||++.++..+..+.++|||++..
T Consensus       133 diiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  133 DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             CeecccccccceEEecCCCcCceEEEeecchhc
Confidence            999999999999999887767789999999864

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=1.3e-10  Score=84.94  Aligned_cols=97  Identities=27%  Similarity=0.429  Sum_probs=73.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+..+|+.++.++. --.|+.-.-++.+.....++|||. |..|.+.+...        ...++..+-.-+.-||+.||
T Consensus        43 r~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~gi  113 (204)
T COG3642          43 RERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAGI  113 (204)
T ss_pred             HHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcCe
Confidence            456788999999998 334444444444555678999999 88888788842        24456666666788999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      +|||++++||++..+    .+.++|||++..
T Consensus       114 vHGDLTtsNiIl~~~----~i~~IDfGLg~~  140 (204)
T COG3642         114 VHGDLTTSNIILSGG----RIYFIDFGLGEF  140 (204)
T ss_pred             ecCCCccceEEEeCC----cEEEEECCcccc
Confidence            999999999999753    599999999863

>KOG0606|consensus

Probab=99.19  E-value=6.4e-12  Score=112.08  Aligned_cols=213  Identities=18%  Similarity=0.140  Sum_probs=156.3

Q ss_pred             CCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccC
Q psy2769          26 APGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRE  104 (257)
Q Consensus        26 ~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~  104 (257)
                      +|.++...-.+.-....++++++. +++|...+.. ....+++-+......+..++.+||...+.|+|++|.|.+...+ 
T Consensus       863 ~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~-~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~-  940 (1205)
T KOG0606|consen  863 SPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHN-SGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYD-  940 (1205)
T ss_pred             CCceecccCCCCCCCCcchhhHHhccCCchhhhhc-CCCcccccccchhHHHHhhhhccccchhhcccccccchhhccc-
Confidence            344444444455566789999999 9999988884 3356777778888889999999999989999999999999766 


Q ss_pred             CCCeEEEEeCCcceecCCC---------------------C-----CC--CCCccCCCCcccccChhHhcCCCCCCcchH
Q psy2769         105 NFNTVYLVDFGLAVDFCPN---------------------C-----PP--RIRTRGLTGTARYASVNAHQWLDQSPRDDL  156 (257)
Q Consensus       105 ~~~~~~l~df~~~~~~~~~---------------------~-----~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv  156 (257)
                        +..++.+|+........                     .     ..  ........+|+.|.+||.+.+..-...+|.
T Consensus       941 --gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~ 1018 (1205)
T KOG0606|consen  941 --GHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADW 1018 (1205)
T ss_pred             --CCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchh
Confidence              77888888732211110                     0     00  011234579999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |++|+++++.++|.+||........   ...+..+  ..+++......+....+++...+..+|.+|..+..-.      
T Consensus      1019 ~~~g~~l~e~l~g~pp~na~tpq~~---f~ni~~~--~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~------ 1087 (1205)
T KOG0606|consen 1019 WSSGVCLFEVLTGIPPFNAETPQQI---FENILNR--DIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAA------ 1087 (1205)
T ss_pred             hhhhhhhhhhhcCCCCCCCcchhhh---hhccccC--CCCCCCCccccChhhhhhhhhhhccCchhccCccccc------
Confidence            9999999999999999998544332   2223222  2345555567888999999999999999998765221      


Q ss_pred             HHhccccCCCCCccccccc
Q psy2769         237 LENKERCEFDLRYDWTLLE  255 (257)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~  255 (257)
                        ..++..+....+|++|.
T Consensus      1088 --e~k~~~~~~~~~~~~l~ 1104 (1205)
T KOG0606|consen 1088 --EVKGHPFFQDVDWENLA 1104 (1205)
T ss_pred             --ccccCCccCCCCccccc
Confidence              12235577788888875

>KOG2137|consensus

Probab=99.15  E-value=9.7e-12  Score=106.71  Aligned_cols=157  Identities=16%  Similarity=0.134  Sum_probs=110.1

Q ss_pred             HHHHHHHHHHHHHHHHHh-CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-CCC-----CccCCCCccccc
Q psy2769          68 TVLMLADQMISRLEHVHR-KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-PRI-----RTRGLTGTARYA  140 (257)
Q Consensus        68 ~~~~~~~~i~~~l~~lh~-~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-~~~-----~~~~~~~~~~~~  140 (257)
                      ....=+.+++.|+.++|. .++||++|.|++|.++..   +..||++|+++........ +..     ...-......|.
T Consensus       100 ~~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~---~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~  176 (700)
T KOG2137|consen  100 DGFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVNAN---GDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFL  176 (700)
T ss_pred             HhhhhhhcccchhhhhccCcceeecccchhheeeccC---cceeeccchhhhccCCCCccccccCCCCCChhhccCcccc
Confidence            333345566689999995 489999999999999877   8899999998876554221 000     001123456899


Q ss_pred             ChhHhcCCCCCCcchHHHHHHHHHHHH-hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCC
Q psy2769         141 SVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLA  219 (257)
Q Consensus       141 aPE~~~~~~~~~~~Dv~slg~~l~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  219 (257)
                      |||++.+...+..+|+||+|+++|.++ .|+..+..........    ...........-....+|.++++-+.+++..+
T Consensus       177 apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~----~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~  252 (700)
T KOG2137|consen  177 APEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS----FSRNLLNAGAFGYSNNLPSELRESLKKLLNGD  252 (700)
T ss_pred             cchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh----hhhcccccccccccccCcHHHHHHHHHHhcCC
Confidence            999999988899999999999999998 4666665533322111    11112222222222679999999999999999


Q ss_pred             CCCCCChHHHHH
Q psy2769         220 FSEEPNYGKLRD  231 (257)
Q Consensus       220 p~~Rp~~~~~~~  231 (257)
                      +.-||++..+..
T Consensus       253 ~~~rp~~~~l~~  264 (700)
T KOG2137|consen  253 SAVRPTLDLLLS  264 (700)
T ss_pred             cccCcchhhhhc
Confidence            999997776643

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.15  E-value=2e-10  Score=85.31  Aligned_cols=94  Identities=19%  Similarity=0.271  Sum_probs=72.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+.+...+++++.+...  ..++|||++ |.++.+. .        ......+.+++.+++.||+.++
T Consensus        36 ~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~G~~l~~~-~--------~~~~~~~~~l~~~l~~LH~~~~  104 (170)
T cd05151          36 LINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIEGSELLTE-D--------FSDPENLEKIAKLLKKLHSSPL  104 (170)
T ss_pred             ccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecCCCccccc-c--------ccCHHHHHHHHHHHHHHhCCCC
Confidence            34578999999999855556777776543  357999999 7766542 0        1113456789999999999885


Q ss_pred             -----cccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          89 -----VHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        89 -----~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                           +|+|++|.||+++ +   +.++++||+.+.
T Consensus       105 ~~~~~~HgD~~~~Nil~~-~---~~~~liDf~~a~  135 (170)
T cd05151         105 PDLVPCHNDLLPGNFLLD-D---GRLWLIDWEYAG  135 (170)
T ss_pred             CCceeecCCCCcCcEEEE-C---CeEEEEeccccc
Confidence                 9999999999997 3   579999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.14  E-value=3.5e-10  Score=85.44  Aligned_cols=96  Identities=26%  Similarity=0.382  Sum_probs=69.7

Q ss_pred             HHHHHHHHHhcCC-CCCcEEEeeeeeCCccEEEEecc-CCCHH-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcc
Q psy2769          14 FWERNFYEKLHGA-PGVPHVMGYGTSGDYNILVMELL-GPSLE-DLFQYCSKRFSLKTVLMLADQMISRLEHVHR-KKIV   89 (257)
Q Consensus        14 ~~E~~~~~~l~~~-~~i~~~~~~~~~~~~~~~v~e~~-~~~L~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~i~   89 (257)
                      ..|...+..+.++ -.+++.++..    ..+++|||+ ++++. ..+....  . ...+..++.+++.++.++|. .|++
T Consensus        65 ~~e~~~l~~l~~~~~~~~~~~~~~----~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~iv  137 (187)
T cd05119          65 EKEFRNLKRLYEAGVPVPKPIDLN----RHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAGLV  137 (187)
T ss_pred             HHHHHHHHHHHHcCCCCCceEecC----CCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccCcC
Confidence            4677777777633 2356665542    368999999 63322 1112111  1 16778899999999999999 9999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceec
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDF  120 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~  120 (257)
                      |+|++|+||+++ +   +.++++|||.+...
T Consensus       138 H~Dl~p~Nili~-~---~~~~liDfg~a~~~  164 (187)
T cd05119         138 HGDLSEYNILVD-D---GKVYIIDVPQAVEI  164 (187)
T ss_pred             cCCCChhhEEEE-C---CcEEEEECcccccc
Confidence            999999999998 4   78999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.04  E-value=3.6e-09  Score=83.96  Aligned_cols=106  Identities=22%  Similarity=0.229  Sum_probs=81.2

Q ss_pred             ccHHHHHHHHHhcCCCC--CcEEEeeeee-----CCccEEEEecc-CC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q psy2769          12 RLFWERNFYEKLHGAPG--VPHVMGYGTS-----GDYNILVMELL-GP-SLEDLFQYC-SKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~--i~~~~~~~~~-----~~~~~~v~e~~-~~-~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      .+.+|...+.+|. .-+  .+...++++.     ....++|+|++ +. +|.+++... ....+......++.++...++
T Consensus        74 ~a~rE~~~l~~L~-~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~  152 (268)
T PRK15123         74 GADREWRAIHRLH-EVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVR  152 (268)
T ss_pred             HHHHHHHHHHHHH-HcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHH
Confidence            4789999999996 333  3344445543     23478999999 43 798888632 345667778899999999999


Q ss_pred             HHHhCCccccCCCCCceEeecc----CCCCeEEEEeCCcce
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVR----ENFNTVYLVDFGLAV  118 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~----~~~~~~~l~df~~~~  118 (257)
                      -||+.|++|+|+++.||++..+    .....+.++||+.+.
T Consensus       153 ~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        153 DMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            9999999999999999999752    234689999999875

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.02  E-value=1.3e-09  Score=92.69  Aligned_cols=102  Identities=25%  Similarity=0.373  Sum_probs=72.1

Q ss_pred             ccHHHHHHHHHhc----CCCC--CcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHH-HHHHH
Q psy2769          12 RLFWERNFYEKLH----GAPG--VPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMIS-RLEHV   83 (257)
Q Consensus        12 ~~~~E~~~~~~l~----~~~~--i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~-~l~~l   83 (257)
                      .+.+|+..+.++.    ++++  +++++.  ......+++|||+ |.+|.+.........+   ...++..++. .+..+
T Consensus       199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql  273 (437)
T TIGR01982       199 DLRREAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQV  273 (437)
T ss_pred             CHHHHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHH
Confidence            4666777777764    3344  344443  2234579999999 9999887763222232   2345555555 36778


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecC
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC  121 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~  121 (257)
                      |..|++|+|++|.||++..+   +.++++|||++..+.
T Consensus       274 ~~~g~~H~D~hPgNilv~~~---g~i~liDfG~~~~l~  308 (437)
T TIGR01982       274 LRDGFFHADLHPGNIFVLKD---GKIIALDFGIVGRLS  308 (437)
T ss_pred             HhCCceeCCCCcccEEECCC---CcEEEEeCCCeeECC
Confidence            99999999999999999766   889999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0601|consensus

Probab=99.02  E-value=1.7e-10  Score=97.53  Aligned_cols=198  Identities=16%  Similarity=0.068  Sum_probs=143.1

Q ss_pred             HHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q psy2769          14 FWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD   92 (257)
Q Consensus        14 ~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~d   92 (257)
                      ..|+.+...+..|.+.+..+..+....+.++-.||| ++++..... ....+++...+++..|++.++.++|++.++|.|
T Consensus       313 l~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~-~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d  391 (524)
T KOG0601|consen  313 LGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSV-TSQMLDEDPRLRLTAQILTALNVIHSKLFVHLD  391 (524)
T ss_pred             hhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhH-HHHhcCcchhhhhHHHHHhccccccchhhhccc
Confidence            457777777877888888777666666778999999 777766553 356788899999999999999999999999999


Q ss_pred             CCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcc-cc-cChhHhcCCCCCCcchHHHHHHHHHHHHhCC
Q psy2769          93 IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTA-RY-ASVNAHQWLDQSPRDDLEALCYTLVYFLRGK  170 (257)
Q Consensus        93 l~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~-~~-~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~  170 (257)
                      ++|.||++..++  +..++.||+....+.-..      ....+.. .| .++..........++|++|||..+.+..++.
T Consensus       392 ~~psni~i~~~~--~~~~~~~~~~~t~~~~~~------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~  463 (524)
T KOG0601|consen  392 VKPSNILISNDG--FFSKLGDFGCWTRLAFSS------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGS  463 (524)
T ss_pred             ccccceeeccch--hhhhccccccccccceec------ccccccccccccchhhccccccccccccccccccccccccCc
Confidence            999999997642  678899999876532221      1122222 33 3566666777889999999999999988875


Q ss_pred             CCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         171 LPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       171 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ..-......      ..+..+..+..     .+.+..+..+.+.+...++..||.+.++..
T Consensus       464 ~ls~~~~~~------~~i~~~~~p~~-----~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~  513 (524)
T KOG0601|consen  464 PLSESGVQS------LTIRSGDTPNL-----PGLKLQLQVLLKVMINPDRKRRPSAVELSL  513 (524)
T ss_pred             ccCcccccc------eeeecccccCC-----CchHHhhhhhhhhhcCCccccchhhhhhcc
Confidence            432221111      12233333322     344577888999999999999998877643

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.01  E-value=7.4e-10  Score=83.04  Aligned_cols=101  Identities=28%  Similarity=0.373  Sum_probs=68.8

Q ss_pred             ccccHHHHHHHHHhcCCC-CCcEEEeeeeeCCccEEEEeccC--CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHh
Q psy2769          10 VQRLFWERNFYEKLHGAP-GVPHVMGYGTSGDYNILVMELLG--PSLEDLFQYCSKRFSLKTVLMLADQMISRLEH-VHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~-~i~~~~~~~~~~~~~~~v~e~~~--~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~-lh~   85 (257)
                      ..+..+|.+.|.++.... ++|+++++.    ..++||||++  |.....+..  ..++......++.+++..+.. +|+
T Consensus        52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~l~~--~~~~~~~~~~~~~~il~~~~~~~~~  125 (188)
T PF01163_consen   52 REWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPRLKD--VDLSPEEPKELLEEILEEIIKMLHK  125 (188)
T ss_dssp             HHHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGCHHH--CGGGGSTHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhhHHh--ccccchhHHHHHHHHHHHHHHHHHh
Confidence            457888999999998553 688888653    3579999996  554444442  222244566777888885544 689


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceec
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF  120 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~  120 (257)
                      .|++|||+++.||+++.    +.+.++|||.+...
T Consensus       126 ~givHGDLs~~NIlv~~----~~~~iIDf~qav~~  156 (188)
T PF01163_consen  126 AGIVHGDLSEYNILVDD----GKVYIIDFGQAVDS  156 (188)
T ss_dssp             TTEEESS-STTSEEEET----TCEEE--GTTEEET
T ss_pred             cCceecCCChhhEEeec----ceEEEEecCcceec
Confidence            99999999999999975    37999999988654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.99  E-value=9.9e-09  Score=78.74  Aligned_cols=109  Identities=24%  Similarity=0.360  Sum_probs=86.5

Q ss_pred             cccccHHHHHHHHHhcCCCC--CcEEEeeeeeCC----ccEEEEecc-C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPG--VPHVMGYGTSGD----YNILVMELL-G-PSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~--i~~~~~~~~~~~----~~~~v~e~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ...+..+|...+..|. .-+  .++.+++.+...    ..++|+|++ + .+|.+++.... ..+......++.++...+
T Consensus        54 ~~~ra~~E~~~~~~L~-~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-~~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   54 RRSRAKREWRNLQRLR-EAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-QLDPSQRRELLRALARLI  131 (206)
T ss_pred             cchHHHHHHHHHHHHH-HcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-ccchhhHHHHHHHHHHHH
Confidence            3457889999999987 332  566677666532    358999999 4 47888888422 367778889999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      +-||+.|++|+|+++.||++..++....+.++||+.+..
T Consensus       132 ~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  132 AKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            999999999999999999999874445899999998764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3741|consensus

Probab=98.93  E-value=6.2e-08  Score=81.32  Aligned_cols=179  Identities=15%  Similarity=0.181  Sum_probs=128.5

Q ss_pred             HHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc--CCCHHHHHHHh--------------cCCCCHHHHHHHH
Q psy2769          14 FWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL--GPSLEDLFQYC--------------SKRFSLKTVLMLA   73 (257)
Q Consensus        14 ~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~--~~~L~~~~~~~--------------~~~~~~~~~~~~~   73 (257)
                      ..-+++++++. |+|++++.++|.+    +..+++|++|.  .++|.++.-..              +...++..++.++
T Consensus       321 t~lve~wkkl~-h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~  399 (655)
T KOG3741|consen  321 TSLVEAWKKLC-HTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYI  399 (655)
T ss_pred             hHHHHHHHHhc-cCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHH
Confidence            44588999999 9999999998873    44689999998  78898877532              2346678999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|+..||.++|+.|+..+-+.+.+|+++.+   .+++|...|..-......               .  +.+.   ...+
T Consensus       400 ~QLtaaL~sIHssGLAck~L~~~kIlv~G~---~RIriS~C~i~Dvl~~d~---------------~--~~le---~~Qq  456 (655)
T KOG3741|consen  400 SQLTAALYSIHSSGLACKTLDLKKILVTGK---MRIRISGCGIMDVLQEDP---------------T--EPLE---SQQQ  456 (655)
T ss_pred             HHHHHHHHHHHhcCceeecccHhHeEeeCc---ceEEEecccceeeecCCC---------------C--cchh---HHhh
Confidence            999999999999999999999999999854   578888777654432211               0  1111   1346


Q ss_pred             chHHHHHHHHHHHHhCCC-CCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         154 DDLEALCYTLVYFLRGKL-PWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .|.-.||.+++.|.+|.. -|..   ......  +         ...+...++.+++++|..+...++++ -++.+++.
T Consensus       457 ~D~~~lG~ll~aLAt~~~ns~~~---d~~~~s--~---------~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp  520 (655)
T KOG3741|consen  457 NDLRDLGLLLLALATGTENSNRT---DSTQSS--H---------LTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLP  520 (655)
T ss_pred             hhHHHHHHHHHHHhhcccccccc---cchHHH--H---------HHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHH
Confidence            899999999999999842 2222   111111  0         11112567788899999998888886 35666554

>PRK09902 hypothetical protein; Provisional

Probab=98.84  E-value=6.1e-08  Score=73.37  Aligned_cols=110  Identities=12%  Similarity=0.061  Sum_probs=84.2

Q ss_pred             CcccccHHHHHHHHHhcC--CCCCcEEEeeeee----CCccEEEEeccC--CCHHHHHHHh-cCCCCHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHG--APGVPHVMGYGTS----GDYNILVMELLG--PSLEDLFQYC-SKRFSLKTVLMLADQMIS   78 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~--~~~i~~~~~~~~~----~~~~~~v~e~~~--~~L~~~~~~~-~~~~~~~~~~~~~~~i~~   78 (257)
                      .....|.+|+..+++|..  .| ++++......    ....++|+|-++  .+|.+++... -.+.+......++.++..
T Consensus        61 ~g~ptf~rE~~~L~~L~~~GvP-VP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~  139 (216)
T PRK09902         61 FGRPTIVREVAVIKELERAGVI-VPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVAL  139 (216)
T ss_pred             CCchHHHHHHHHHHHHHHcCCC-CCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHH
Confidence            356789999999999972  34 5555522222    124789999885  8898888642 235677888899999999


Q ss_pred             HHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          79 RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        79 ~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      .++-||+.|+.|+|+.+.||+++.++ ...+.++||+.++.
T Consensus       140 ~ia~LH~~Gv~Hgdly~khIll~~~g-~~~v~lIDlEk~r~  179 (216)
T PRK09902        140 AFKKMHSVNRQHGCCYVRHIYVKTEG-KAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHCCCcCCCCCHhheeecCCC-CeeEEEEEhhccch
Confidence            99999999999999999999997542 23599999998754

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.72  E-value=6.6e-08  Score=74.91  Aligned_cols=106  Identities=25%  Similarity=0.307  Sum_probs=76.3

Q ss_pred             ccccHHHHHHHHHhcCC-CCCcEEEeeeeeC---CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGA-PGVPHVMGYGTSG---DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~-~~i~~~~~~~~~~---~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ...+.+|+.++..+..+ ..+++++.+....   +..+++||++ |.++.+.+.  ...++......++.+++.+|..||
T Consensus        39 ~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH  116 (223)
T cd05154          39 AHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLL--RPELSPEERRALARALADTLAALH  116 (223)
T ss_pred             cccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCC--CCCCCHHHHHHHHHHHHHHHHHHh
Confidence            56789999999999843 3478888877654   3578999999 877766442  123555566666666666666666


Q ss_pred             h--------------------------------------------------------CCccccCCCCCceEeeccCCCCe
Q psy2769          85 R--------------------------------------------------------KKIVHRDIKPDNFLMGVRENFNT  108 (257)
Q Consensus        85 ~--------------------------------------------------------~~i~H~dl~~~nili~~~~~~~~  108 (257)
                      +                                                        ..++|+|+.+.||+++.+ ..+.
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~  195 (223)
T cd05154         117 SVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRV  195 (223)
T ss_pred             CCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcE
Confidence            2                                                        346899999999999762 1267


Q ss_pred             EEEEeCCcce
Q psy2769         109 VYLVDFGLAV  118 (257)
Q Consensus       109 ~~l~df~~~~  118 (257)
                      +.++||+.+.
T Consensus       196 ~~iID~e~~~  205 (223)
T cd05154         196 VAVLDWELAT  205 (223)
T ss_pred             EEEEeccccc
Confidence            8999999874

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.65  E-value=1.2e-07  Score=82.05  Aligned_cols=101  Identities=21%  Similarity=0.280  Sum_probs=63.9

Q ss_pred             cHHHHHHHHHhc----CCC--CCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCC-----CCHHHHHHHHHHHHHHH
Q psy2769          13 LFWERNFYEKLH----GAP--GVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKR-----FSLKTVLMLADQMISRL   80 (257)
Q Consensus        13 ~~~E~~~~~~l~----~~~--~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~-----~~~~~~~~~~~~i~~~l   80 (257)
                      +.+|+..+.++.    +.+  .|++++.-+  ....++||||+ |+++.++-......     +....+..++.|+    
T Consensus       203 ~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~--st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi----  276 (537)
T PRK04750        203 LMREAANASQLRRNFEDSDMLYVPEVYWDY--CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV----  276 (537)
T ss_pred             HHHHHHHHHHHHHHccCCCCeecceeeccc--CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH----
Confidence            455665565554    222  234444322  34578999999 99998753311222     3333344444444    


Q ss_pred             HHHHhCCccccCCCCCceEeeccC-CCCeEEEEeCCcceecCC
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRE-NFNTVYLVDFGLAVDFCP  122 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~-~~~~~~l~df~~~~~~~~  122 (257)
                         ...|++|+|++|.||+++.++ ..++++++|||++..+..
T Consensus       277 ---f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 ---FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             ---HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence               468999999999999998761 123899999999876544

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.40  E-value=1e-06  Score=68.71  Aligned_cols=97  Identities=22%  Similarity=0.306  Sum_probs=73.8

Q ss_pred             ccccHHHHHHHHHhcCC-CCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGA-PGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~-~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      +...++|..+|++|.+. -.+|+.+++-    ...+|||+. |..|..      -+++.+....++..|+.-+..+-..|
T Consensus       153 Rl~A~rEf~~L~~L~~~G~~VP~P~~~n----RHaVvMe~ieG~eL~~------~r~~~en~~~il~~il~~~~~~~~~G  222 (304)
T COG0478         153 RLAAEREFEALQRLYPEGVKVPKPIAWN----RHAVVMEYIEGVELYR------LRLDVENPDEILDKILEEVRKAYRRG  222 (304)
T ss_pred             HHHHHHHHHHHHHhhhcCCCCCCccccc----cceeeeehcccceeec------ccCcccCHHHHHHHHHHHHHHHHHcC
Confidence            44678899999999844 3678877743    567999999 644432      22345566667777777777777999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      ++|||+++-||+++.|   |.+.++||--+..
T Consensus       223 iVHGDlSefNIlV~~d---g~~~vIDwPQ~v~  251 (304)
T COG0478         223 IVHGDLSEFNILVTED---GDIVVIDWPQAVP  251 (304)
T ss_pred             ccccCCchheEEEecC---CCEEEEeCccccc
Confidence            9999999999999877   8899999986643

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.39  E-value=8.4e-07  Score=67.55  Aligned_cols=65  Identities=26%  Similarity=0.472  Sum_probs=50.9

Q ss_pred             ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          41 YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        41 ~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      ..+++|||+ |..|.+...     +++    .+...+..++.-+|+.|++|||.+|.|+++..    +.++++|++...
T Consensus       117 ~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~----~~i~iID~~~k~  182 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN----NGIRIIDTQGKR  182 (229)
T ss_pred             EEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC----CcEEEEECcccc
Confidence            456899999 877766543     333    24456777889999999999999999999975    359999998764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.33  E-value=6.2e-06  Score=64.16  Aligned_cols=50  Identities=20%  Similarity=0.139  Sum_probs=38.5

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCC-CcEEEeeeeeCCccEEEEecc-CC
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPG-VPHVMGYGTSGDYNILVMELL-GP   51 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~-i~~~~~~~~~~~~~~~v~e~~-~~   51 (257)
                      |+.+.......+.+|.+++..+.+..- +++++++...++...++|+++ |.
T Consensus        28 R~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~   79 (226)
T TIGR02172        28 KLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK   79 (226)
T ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence            444443445678999999999985544 789999988887888999999 64

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.24  E-value=1.3e-05  Score=63.16  Aligned_cols=46  Identities=26%  Similarity=0.321  Sum_probs=38.1

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDL   56 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~   56 (257)
                      ..+.+|++++..+.++-.+++++++...++..++||+++ |.++.+.
T Consensus        36 ~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150          36 YELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            468899999999987766889999888777789999999 7776643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.20  E-value=8.1e-06  Score=61.52  Aligned_cols=100  Identities=20%  Similarity=0.223  Sum_probs=78.0

Q ss_pred             HHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHh---CC
Q psy2769          14 FWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY--CSKRFSLKTVLMLADQMISRLEHVHR---KK   87 (257)
Q Consensus        14 ~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~---~~   87 (257)
                      ..|.-+++.+++.+++++++|+|.    .+++.|+. .+++......  .-...++..+.+++.+++..+.+++.   ..
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            458899999998789999999984    35688888 4555321000  01236789999999999999999986   45


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceec
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF  120 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~  120 (257)
                      +.-.|++++|+.++.+   +.++++|...+...
T Consensus        83 ~~lcDv~~~nfgv~~~---~~lk~iDld~v~~~  112 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDD---GRLKLIDLDDVFVE  112 (188)
T ss_pred             EEEeecchHHeEEeCC---CcEEEEechhcchh
Confidence            8889999999999866   88999999987543

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.19  E-value=3.7e-05  Score=58.27  Aligned_cols=103  Identities=23%  Similarity=0.368  Sum_probs=77.5

Q ss_pred             cccccHHHHHHHHHhc-----CCCCCcEEEeeeeeCCccEEEEecc-------CCCHHHHHHHhcCCCCHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLH-----GAPGVPHVMGYGTSGDYNILVMELL-------GPSLEDLFQYCSKRFSLKTVLMLADQM   76 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~-----~~~~i~~~~~~~~~~~~~~~v~e~~-------~~~L~~~~~~~~~~~~~~~~~~~~~~i   76 (257)
                      ......+|+.-+..+.     .+.+|++++|+.+++.-..+|+|..       +.||.+++.  ...++. .....+.+.
T Consensus        54 ~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~--~~~~~~-~~~~~L~~f  130 (199)
T PF10707_consen   54 RYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLK--EGGLTE-ELRQALDEF  130 (199)
T ss_pred             hhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHH--cCCccH-HHHHHHHHH
Confidence            3567888888888886     3578999999999988888999875       357888886  455666 444444443


Q ss_pred             HHHHHHHHhCCccccCCCCCceEeeccCCCC-eEEEEe-CCcc
Q psy2769          77 ISRLEHVHRKKIVHRDIKPDNFLMGVRENFN-TVYLVD-FGLA  117 (257)
Q Consensus        77 ~~~l~~lh~~~i~H~dl~~~nili~~~~~~~-~~~l~d-f~~~  117 (257)
                         ..+|-+.+|+.+|++|.||++....... .+.++| ||..
T Consensus       131 ---~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  131 ---KRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGEK  170 (199)
T ss_pred             ---HHHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCCCc
Confidence               4577889999999999999999875544 688887 5544

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG1035|consensus

Probab=98.13  E-value=1.9e-05  Score=72.79  Aligned_cols=201  Identities=15%  Similarity=0.064  Sum_probs=136.0

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCC----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ...+...-|...+.++. |+|+..++.|.....    ...+..++| +.++.+.+.. -...+..+.+.+..+...|+.+
T Consensus       224 ~~i~~~E~e~~~l~k~~-~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~  301 (1351)
T KOG1035|consen  224 KEIQTTEIELESLSKIA-HDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAY  301 (1351)
T ss_pred             HHHHHHHHHHHHHHhhc-cccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHH
Confidence            44556777888999998 999999999876432    334666778 7888877773 5678889999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEE--eCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCC--cchHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLV--DFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP--RDDLEA  158 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~--~~Dv~s  158 (257)
                      +|+..+.|.-+..+...-......+.+.++  ||+...........    .....+..+.+||.........  ..|+|.
T Consensus       302 ~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~----~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~  377 (1351)
T KOG1035|consen  302 LHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS----FSDLLAEIRNADEDLKENTAKKSRLTDLWC  377 (1351)
T ss_pred             HHHhccceeEEecccccccccCccceeecchhhhcccccCCCcccc----hhhcCccccccccccccccchhhhhhHHHH
Confidence            999866665555552222211222455555  88877665443221    3334566778888887765544  479999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         159 LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       159 lg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|.....+..|..+-....          ....-..       ........+...+|+.-++++|+++.+++.
T Consensus       378 lgll~~~~~~~~~i~~~~~----------~~~~~l~-------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~  433 (1351)
T KOG1035|consen  378 LGLLLLQLSQGEDISEKSA----------VPVSLLD-------VLSTSELLDALPKCLDEDSEERLSALELLT  433 (1351)
T ss_pred             HHHHHhhhhhcCccccccc----------chhhhhc-------cccchhhhhhhhhhcchhhhhccchhhhhh
Confidence            9999998877654332210          0000000       112225788999999999999999988866

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.88  E-value=8.4e-05  Score=57.57  Aligned_cols=99  Identities=21%  Similarity=0.309  Sum_probs=70.9

Q ss_pred             ccHHHHHHHHHhcCC-CCCcEEEeeeeeCCccEEEEeccCCCH--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q psy2769          12 RLFWERNFYEKLHGA-PGVPHVMGYGTSGDYNILVMELLGPSL--EDLFQYCSKRFSLKTVLMLADQMISRLEHVHR-KK   87 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~-~~i~~~~~~~~~~~~~~~v~e~~~~~L--~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~   87 (257)
                      ...+|..-|.++... =.+|+-+++.    ...+|||++|..-  .-.+.  .-.+..+++..+..+++..+.-|-. .|
T Consensus       114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~  187 (268)
T COG1718         114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAG  187 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcC
Confidence            567788889988732 2355555544    3679999995431  11111  2233444688888999999987766 99


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceec
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF  120 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~  120 (257)
                      +||+||+.-|||+. +   +.+.++|++-+...
T Consensus       188 LVHgDLSEyNiL~~-~---~~p~iID~~QaV~~  216 (268)
T COG1718         188 LVHGDLSEYNILVH-D---GEPYIIDVSQAVTI  216 (268)
T ss_pred             cccccchhhheEEE-C---CeEEEEECcccccc
Confidence            99999999999997 3   68999999988654

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.87  E-value=9.1e-05  Score=54.37  Aligned_cols=103  Identities=26%  Similarity=0.309  Sum_probs=76.9

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISR   79 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~   79 (257)
                      +|+...+..+..+..|+++++.+++....++++.|....    +.|||. |.+|.+.-..    .+.++    ...++..
T Consensus        50 ~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~~----i~me~i~G~~L~~~~~~----~~rk~----l~~vlE~  117 (201)
T COG2112          50 LKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGEDF----IRMEYIDGRPLGKLEIG----GDRKH----LLRVLEK  117 (201)
T ss_pred             EEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechhh----hhhhhhcCcchhhhhhc----ccHHH----HHHHHHH
Confidence            466667788889999999999999888899999988654    349999 7788776552    13333    3445555


Q ss_pred             HHHHHhCCccccCCC-CCceEeeccCCCCeEEEEeCCcce
Q psy2769          80 LEHVHRKKIVHRDIK-PDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        80 l~~lh~~~i~H~dl~-~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      -.-|-..||-|+.++ |...++..+   +.+.|+||..++
T Consensus       118 a~~LD~~GI~H~El~~~~k~vlv~~---~~~~iIDFd~At  154 (201)
T COG2112         118 AYKLDRLGIEHGELSRPWKNVLVND---RDVYIIDFDSAT  154 (201)
T ss_pred             HHHHHHhccchhhhcCCceeEEecC---CcEEEEEccchh
Confidence            556778999999997 555555433   579999999886

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.82  E-value=0.00017  Score=62.56  Aligned_cols=103  Identities=25%  Similarity=0.363  Sum_probs=68.1

Q ss_pred             cHHHHHHHHHhc----CCCC--CcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          13 LFWERNFYEKLH----GAPG--VPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        13 ~~~E~~~~~~l~----~~~~--i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +.+|+..+.+++    +.|.  ||+++-  +....-.++|||+ |..+.+.........+...+.....+++  +..+-.
T Consensus       208 y~~EA~n~~~~~~nf~~~~~v~VP~V~w--e~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~  283 (517)
T COG0661         208 YRREAANAERFRENFKDDPDVYVPKVYW--EYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLR  283 (517)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEeceeeh--hccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHh
Confidence            556666666664    3354  344443  3345578999999 9888888543344455433333222221  223335


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCC
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCP  122 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~  122 (257)
                      .|++|.|..|.||++..+   +++.+.|||+...+..
T Consensus       284 dgffHaDpHpGNi~v~~~---g~i~~lDfGi~g~l~~  317 (517)
T COG0661         284 DGFFHADPHPGNILVRSD---GRIVLLDFGIVGRLDP  317 (517)
T ss_pred             cCccccCCCccceEEecC---CcEEEEcCcceecCCH
Confidence            899999999999999877   9999999999866543

>KOG1235|consensus

Probab=97.78  E-value=0.00018  Score=62.24  Aligned_cols=90  Identities=23%  Similarity=0.291  Sum_probs=63.8

Q ss_pred             CcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccC-CC
Q psy2769          29 VPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRE-NF  106 (257)
Q Consensus        29 i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~-~~  106 (257)
                      ||+++-.+++  ...++|||+ |..+.|+-.-....++...+..-+.+...  .-+-..|++|+|-.|.||++.++. ..
T Consensus       266 VP~Vy~~~st--~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~--~qIf~~GffHaDPHPGNilv~~~~~~~  341 (538)
T KOG1235|consen  266 VPKVYWDLST--KRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL--EQIFKTGFFHADPHPGNILVRPNPEGD  341 (538)
T ss_pred             CCeehhhcCc--ceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH--HHHHhcCCccCCCCCCcEEEecCCCCC
Confidence            6666655543  478999999 88887776544566777755444444332  223457899999999999999652 45


Q ss_pred             CeEEEEeCCcceecCC
Q psy2769         107 NTVYLVDFGLAVDFCP  122 (257)
Q Consensus       107 ~~~~l~df~~~~~~~~  122 (257)
                      +.+.+.|||+...+..
T Consensus       342 ~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  342 EEIVLLDHGLYAVISH  357 (538)
T ss_pred             ccEEEEcccccccccH
Confidence            7899999999876543

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.68  E-value=0.00021  Score=55.96  Aligned_cols=52  Identities=19%  Similarity=0.305  Sum_probs=35.1

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCC--CCCcEEEeeeeeC---CccEEEEecc-CCCH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGA--PGVPHVMGYGTSG---DYNILVMELL-GPSL   53 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~--~~i~~~~~~~~~~---~~~~~v~e~~-~~~L   53 (257)
                      |+.+.......+.+|..++..|.++  -.++++++.....   ...+++|+++ |.++
T Consensus        24 R~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l   81 (235)
T cd05155          24 RLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETA   81 (235)
T ss_pred             EcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCC
Confidence            4444433455799999999999753  2467777665543   2458899998 7555

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.58  E-value=0.00023  Score=55.36  Aligned_cols=47  Identities=32%  Similarity=0.535  Sum_probs=32.9

Q ss_pred             cccccHHHHHHHHHhcCCC-CCcEEEeeeee---CCccEEEEecc-CCCHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAP-GVPHVMGYGTS---GDYNILVMELL-GPSLED   55 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~-~i~~~~~~~~~---~~~~~~v~e~~-~~~L~~   55 (257)
                      ....+.+|..++..+..+. .+++++.....   ....+++|+++ |.++..
T Consensus        33 ~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   33 AAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence            3467889999999998553 37888875433   33578999999 777776

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0576|consensus

Probab=97.58  E-value=2.2e-05  Score=68.12  Aligned_cols=150  Identities=18%  Similarity=0.147  Sum_probs=104.8

Q ss_pred             cccHHHHHHHHHhcCCCC-CcEEEeeeeeCCccEEEEecc-CC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          11 QRLFWERNFYEKLHGAPG-VPHVMGYGTSGDYNILVMELL-GP-SLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~-i~~~~~~~~~~~~~~~v~e~~-~~-~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ....-++++|.+++ ||| .+..++-++-+....+.++++ ++ +........+..+..-+...+.+.-..+++++|+.-
T Consensus       278 l~~rl~~eLLdK~n-~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~  356 (829)
T KOG0576|consen  278 LSRRLAIELLDKVN-NPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSY  356 (829)
T ss_pred             hhhHHHHHHHHHcc-CCCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccccc
Confidence            34566889999998 899 444455555566889999999 44 222222111222333445556666777888999876


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      =+|+|    ||+...    +..+..+|+....+....    ......+++.++|||+.....+..+.|+|++|.-..++.
T Consensus       357 ~~~~d----~~l~s~----~~~~~~~~~v~~~L~~~~----~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~a  424 (829)
T KOG0576|consen  357 KVHRD----NILGSE----EEVKLLDFAVPPQLTRTM----KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMA  424 (829)
T ss_pred             ccCcc----cccccc----cccccccccCCcccCccc----ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcC
Confidence            57887    776543    578999999876655432    225678999999999999999999999999998767766


Q ss_pred             hCCCCC
Q psy2769         168 RGKLPW  173 (257)
Q Consensus       168 ~g~~p~  173 (257)
                      -|.+|-
T Consensus       425 p~~pPr  430 (829)
T KOG0576|consen  425 PGLPPR  430 (829)
T ss_pred             CCCCCC
Confidence            665553

>PLN02876 acyl-CoA dehydrogenase

Probab=97.58  E-value=0.0004  Score=64.38  Aligned_cols=42  Identities=24%  Similarity=0.262  Sum_probs=32.8

Q ss_pred             cccHHHHHHHHHhcCCCC--CcEEEeeeeeC---CccEEEEecc-CCC
Q psy2769          11 QRLFWERNFYEKLHGAPG--VPHVMGYGTSG---DYNILVMELL-GPS   52 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~--i~~~~~~~~~~---~~~~~v~e~~-~~~   52 (257)
                      ..+.+|+.++..|.++++  +++++.++.+.   +..|+|||++ |..
T Consensus        83 ~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~  130 (822)
T PLN02876         83 HAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRI  130 (822)
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcc
Confidence            468899999999975554  58888887764   4688999999 543

>KOG2268|consensus

Probab=97.57  E-value=7.8e-05  Score=60.06  Aligned_cols=92  Identities=20%  Similarity=0.285  Sum_probs=68.7

Q ss_pred             ccHHHHHHHHHhcCCCC-CcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          12 RLFWERNFYEKLHGAPG-VPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~-i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ...+|...++.|..+.+ +|+.+++    ++.|+|||++ |.+|..+..       ......+...++.-+--|..+|++
T Consensus       156 aa~kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~-------v~d~~~ly~~lm~~Iv~la~~GlI  224 (465)
T KOG2268|consen  156 AATKEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRH-------VEDPPTLYDDLMGLIVRLANHGLI  224 (465)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeee-------cCChHHHHHHHHHHHHHHHHcCce
Confidence            45679999999986544 6777764    3578999999 887766544       122334445555556678899999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcc
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLA  117 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~  117 (257)
                      |||.+--||++..+   +.++++||--.
T Consensus       225 HgDFNEFNimv~dd---~~i~vIDFPQm  249 (465)
T KOG2268|consen  225 HGDFNEFNIMVKDD---DKIVVIDFPQM  249 (465)
T ss_pred             ecccchheeEEecC---CCEEEeechHh
Confidence            99999999999866   78999999644

>KOG1093|consensus

Probab=97.54  E-value=0.00027  Score=60.35  Aligned_cols=162  Identities=15%  Similarity=0.169  Sum_probs=98.4

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeC-CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSG-DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .++.....+++.++ |++.....++.... .+..+|+|+++.||.+....+.  +....          ++    .+|+.
T Consensus        27 ~~ilgr~~~lktl~-~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s----------~~----~~~~~   89 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQ-HDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDES----------LL----AHGVL   89 (725)
T ss_pred             HHHhhhhHHHHhhc-CccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhh----------hc----ccccc
Confidence            35677788899999 99999998877543 3578999999999999998532  21111          11    12222


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhC
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      |-               +.++.+| -+.    ..       .   .            .+..+++||||+|.++.++..|
T Consensus        90 ~~---------------~~~~~td-~~~----t~-------~---~------------~~~~pKsdVwsl~~i~~el~L~  127 (725)
T KOG1093|consen   90 HL---------------NIIYITD-HFL----TK-------Y---P------------SPIGPKSDVWSLGFIILELYLG  127 (725)
T ss_pred             ee---------------hhhhccc-ccc----cc-------C---C------------CCCCcchhhhhHHHHHHHHHHh
Confidence            21               2233444 000    00       0   0            0112499999999999999988


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhCChh----hhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTMTPE----AICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ...|......+..+.+.+...........    .+.-.++..+.++...|+-..|..||...++.+
T Consensus       128 ~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k  193 (725)
T KOG1093|consen  128 ISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSK  193 (725)
T ss_pred             hHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhc
Confidence            87777654443333333221111110000    112346777889999999999999997766644

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.00  E-value=0.0027  Score=50.43  Aligned_cols=100  Identities=20%  Similarity=0.228  Sum_probs=58.1

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHH--------------HHHHh-c-----CCCCHH-HH
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLED--------------LFQYC-S-----KRFSLK-TV   69 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~--------------~~~~~-~-----~~~~~~-~~   69 (257)
                      ...+|..+++.+..+.-.++++..+.    -++|++++ |.++..              .+..- .     ..++.. .+
T Consensus        37 ~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~  112 (256)
T TIGR02721        37 DRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARI  112 (256)
T ss_pred             cHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            45889999999986545677776543    36899999 655431              11111 1     112211 11


Q ss_pred             HHHHHHH---------HHHHHHHHh--------CCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          70 LMLADQM---------ISRLEHVHR--------KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        70 ~~~~~~i---------~~~l~~lh~--------~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      ..+..++         ...+..+..        ..++|+|+.|.||+++.+   + +.++||+.+..
T Consensus       113 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~~---~-~~lIDwE~a~~  175 (256)
T TIGR02721       113 AHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTPQ---G-LKLIDWEYASD  175 (256)
T ss_pred             HHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeCC---C-CEEEeccccCc
Confidence            1211111         111122211        258999999999999765   4 78999998743

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.00  E-value=0.003  Score=51.22  Aligned_cols=30  Identities=27%  Similarity=0.432  Sum_probs=25.6

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .+++|+|+.|.|++++.+   +.+.++||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~---~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGD---ELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCC---ceEEEeehhhhc
Confidence            479999999999999765   567899999874

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.75  E-value=0.007  Score=49.34  Aligned_cols=42  Identities=24%  Similarity=0.253  Sum_probs=30.6

Q ss_pred             cccccHHHHHHHHHhcCC-CCCcEEEeeeeeCC--ccEEEEecc-C
Q psy2769           9 PVQRLFWERNFYEKLHGA-PGVPHVMGYGTSGD--YNILVMELL-G   50 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~-~~i~~~~~~~~~~~--~~~~v~e~~-~   50 (257)
                      ......+|..++..+... --.+..++++..+.  ..+.||+++ |
T Consensus        64 ~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veG  109 (321)
T COG3173          64 SAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEG  109 (321)
T ss_pred             hhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecc
Confidence            345677888888888653 34666677777665  789999999 5

>KOG1826|consensus

Probab=96.50  E-value=0.00013  Score=69.45  Aligned_cols=156  Identities=11%  Similarity=-0.092  Sum_probs=105.3

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCC---HHHHHHHHHHHHHHHHHHHh
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFS---LKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ....|.+.....+ |+++.....-...  +..-+..++++ +|.+.+.+-.+....+   ..-+.....+.+.+..-.|.
T Consensus      1275 mll~e~de~~~~~-h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1275 MLLSERDELREAK-HYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred             hhhhhhhhhhhhh-ceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence            3444555555566 8887777664432  33567889999 9999999986632222   22222222232444555443


Q ss_pred             C-----CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          86 K-----KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        86 ~-----~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .     -.+|.++++.|.++..+   .+++++++|+.+...+...   .-+...+++.|++|++.+...++.++|+|..|
T Consensus      1354 ~tnlg~T~v~~~Lkf~lpmIVtn---y~v~~gk~gLdKIknp~~s---f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s 1427 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTN---YNVKLGKGGLDKIKNPVLS---FFGLELCSPIYVLQLIKNEIKFTKRSDILRRS 1427 (2724)
T ss_pred             cccCCccchhhhhhhhccceecC---CcccccccccccccCchHh---hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHH
Confidence            2     25899999999999866   7899999999872222111   11456788899999999998999899999999


Q ss_pred             HHHHHHHhCCCCCC
Q psy2769         161 YTLVYFLRGKLPWQ  174 (257)
Q Consensus       161 ~~l~~l~~g~~p~~  174 (257)
                      +.+|..-.|..+|-
T Consensus      1428 ~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1428 LSLYLRSDGNAYFI 1441 (2724)
T ss_pred             HHHHHHhcccHHHH
Confidence            99998766655543

>KOG2270|consensus

Probab=96.13  E-value=0.023  Score=47.11  Aligned_cols=101  Identities=21%  Similarity=0.256  Sum_probs=70.7

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV-HRKKIVH   90 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~H   90 (257)
                      ...+|++-|.++. .-.|+----+...  ...+||+++|.+-+-.-.-..-.++...+..+-.+++..+.-| |..++||
T Consensus       212 WAEKE~RNLkRl~-~aGIP~PePIlLk--~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVH  288 (520)
T KOG2270|consen  212 WAEKEMRNLKRLN-NAGIPCPEPILLK--NHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVH  288 (520)
T ss_pred             HHHHHHHHHHHHH-hcCCCCCCceeee--cceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceec
Confidence            4567999999997 4445433333222  3679999995433222221245677777877778888887665 6789999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      .||+--|+|+-.    |.+.++|-+-+..
T Consensus       289 ADLSEfN~Lyhd----G~lyiIDVSQSVE  313 (520)
T KOG2270|consen  289 ADLSEFNLLYHD----GKLYIIDVSQSVE  313 (520)
T ss_pred             cchhhhhheEEC----CEEEEEEcccccc
Confidence            999999999853    7899999887643

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.13  E-value=0.061  Score=44.58  Aligned_cols=85  Identities=21%  Similarity=0.184  Sum_probs=60.9

Q ss_pred             CCCCcEEEeeee-eCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCceEeecc
Q psy2769          26 APGVPHVMGYGT-SGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-KIVHRDIKPDNFLMGVR  103 (257)
Q Consensus        26 ~~~i~~~~~~~~-~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~H~dl~~~nili~~~  103 (257)
                      .++..+.+-+-. .....|++|++.|+++...-     .-..+++..++.+.+..++-+.+. ..-|+|+.-+||+++ .
T Consensus       284 ~~~~e~~~vv~~de~~y~yl~~kdhgt~is~ik-----~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~  357 (488)
T COG5072         284 SVFLETLKVVSLDETLYLYLHFKDHGTPISIIK-----ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-E  357 (488)
T ss_pred             chhhhcceEEecCCceEEEEEEecCCceeeeee-----cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-c
Confidence            444444443332 23356788888877764322     245678888888888877777644 578999999999997 4


Q ss_pred             CCCCeEEEEeCCccee
Q psy2769         104 ENFNTVYLVDFGLAVD  119 (257)
Q Consensus       104 ~~~~~~~l~df~~~~~  119 (257)
                         |++.|+||.+++.
T Consensus       358 ---GnvtLIDfklsRl  370 (488)
T COG5072         358 ---GNVTLIDFKLSRL  370 (488)
T ss_pred             ---CceEEEEeeeeec
Confidence               8999999999874

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=95.44  E-value=0.064  Score=44.36  Aligned_cols=30  Identities=20%  Similarity=0.465  Sum_probs=24.8

Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      ++|+|+.+.||+++.+  .+.++++||+.+..
T Consensus       184 ~CHnDl~~~NiL~~~~--~~~l~lID~EYag~  213 (330)
T PLN02421        184 FAHNDLLSGNLMLNED--EGKLYFIDFEYGSY  213 (330)
T ss_pred             EEECCCCcccEEEeCC--CCcEEEEcccccCC
Confidence            6899999999999742  25799999998743

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=95.42  E-value=0.2  Score=42.53  Aligned_cols=39  Identities=26%  Similarity=0.240  Sum_probs=30.1

Q ss_pred             cccccHHHHHHHHHhcCC--CCCcEEEeeeeeCCccEEEEecc
Q psy2769           9 PVQRLFWERNFYEKLHGA--PGVPHVMGYGTSGDYNILVMELL   49 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~--~~i~~~~~~~~~~~~~~~v~e~~   49 (257)
                      ..++...|.+.|..+...  ..+|+++.+..  ...++|||++
T Consensus        73 ~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~lVME~L  113 (401)
T PRK09550         73 TLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVTVMEDL  113 (401)
T ss_pred             cHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEEEEecC
Confidence            456778899999987643  46899998855  4578999998

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.41  E-value=0.045  Score=44.25  Aligned_cols=47  Identities=26%  Similarity=0.330  Sum_probs=32.5

Q ss_pred             ccCCCCCcccccHHHHHHHHHhc--CCCCCcEEEeeeeeCCccEEEEecc
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLH--GAPGVPHVMGYGTSGDYNILVMELL   49 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~~~~~v~e~~   49 (257)
                      |+.. ......|..|..-|+.|.  ..-.+|++++++...+..++++|++
T Consensus        46 K~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   46 KVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             EEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             EecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence            4433 344567999999999994  2445899999998887889999998

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PRK10593 hypothetical protein; Provisional

Probab=95.39  E-value=0.066  Score=43.59  Aligned_cols=72  Identities=25%  Similarity=0.175  Sum_probs=53.8

Q ss_pred             cccccHHHHHHHHHhcCC--CCCcEEEeeeee---CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGA--PGVPHVMGYGTS---GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~--~~i~~~~~~~~~---~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ....+.+|...+..|.++  -.++++++++..   .+..++|||++ |.++.+.      ..+......+..+++.+++-
T Consensus        50 ~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~~~------~~~~~~~~~l~~~l~~~La~  123 (297)
T PRK10593         50 TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVEAP------ARTPERWEQLKDQIVEGLLA  123 (297)
T ss_pred             cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecCCC------CCCHHHHHHHHHHHHHHHHH
Confidence            345899999999999865  468999988754   35689999999 7766541      12344556667788888888


Q ss_pred             HHhC
Q psy2769          83 VHRK   86 (257)
Q Consensus        83 lh~~   86 (257)
                      ||+.
T Consensus       124 LH~~  127 (297)
T PRK10593        124 WHRI  127 (297)
T ss_pred             HhCC
Confidence            9974

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.93  E-value=0.063  Score=43.87  Aligned_cols=30  Identities=30%  Similarity=0.533  Sum_probs=26.0

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .+++|+|+++.|++++.+   +.+.++||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~---~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGD---SVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECC---ceEEEeeccccc
Confidence            689999999999999865   567899999874

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.91  E-value=0.037  Score=43.18  Aligned_cols=31  Identities=23%  Similarity=0.348  Sum_probs=25.6

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .+++|+|+.+.||+++.+  ++.+.++||..+.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~--~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEE--KNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCC--CCCEEEEEcccCC
Confidence            368999999999999851  1579999999874

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PLN02756 S-methyl-5-thioribose kinase

Probab=94.76  E-value=0.34  Score=41.15  Aligned_cols=39  Identities=18%  Similarity=0.324  Sum_probs=28.7

Q ss_pred             cccccHHHHHHHHHhcCC--CCCcEEEeeeeeCCccEEEEecc
Q psy2769           9 PVQRLFWERNFYEKLHGA--PGVPHVMGYGTSGDYNILVMELL   49 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~--~~i~~~~~~~~~~~~~~~v~e~~   49 (257)
                      ...+-..|...|+.+...  ..+|+++.++.+  ..+++||++
T Consensus        77 ~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vlvME~L  117 (418)
T PLN02756         77 TKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALIGMRYL  117 (418)
T ss_pred             CccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEEEEeec
Confidence            455666777778777532  479999998884  467889999

>PTZ00384 choline kinase; Provisional

Probab=94.69  E-value=0.29  Score=41.33  Aligned_cols=37  Identities=16%  Similarity=0.143  Sum_probs=29.9

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCH
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSL   53 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L   53 (257)
                      -.+|..+++.+..+..-+++++.+..    +++.||+ |.++
T Consensus        99 R~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~efIeGr~l  136 (383)
T PTZ00384         99 NDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEWVEGNTM  136 (383)
T ss_pred             cHHHHHHHHHHHhCCCCCeEEEecCC----EEEEEEeccccC
Confidence            36799999999978888999998863    5889998 6554

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=94.66  E-value=0.22  Score=37.87  Aligned_cols=86  Identities=26%  Similarity=0.387  Sum_probs=60.8

Q ss_pred             ccccHHHHHHHHHhcCC--CCC--cEEEeeeeeC------------------CccEEEEecc-CCCHHHHHHHhcCCCCH
Q psy2769          10 VQRLFWERNFYEKLHGA--PGV--PHVMGYGTSG------------------DYNILVMELL-GPSLEDLFQYCSKRFSL   66 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~--~~i--~~~~~~~~~~------------------~~~~~v~e~~-~~~L~~~~~~~~~~~~~   66 (257)
                      ..-|..|.+.+.+|+.+  .++  ++++||..-.                  ....+|.|+. ...          .++.
T Consensus        98 ~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~  167 (207)
T PF13095_consen   98 ADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQI  167 (207)
T ss_pred             cChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccch
Confidence            44688999999999843  455  9999987422                  1235677776 322          1233


Q ss_pred             HHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcc
Q psy2769          67 KTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA  117 (257)
Q Consensus        67 ~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~  117 (257)
                      .    -+.+|..-+..+|+.||+-+|+++.|..        .-+|+|||.+
T Consensus       168 ~----~~~~~~~dl~~~~k~gI~~~Dv~~~ny~--------~G~lvDfs~~  206 (207)
T PF13095_consen  168 R----DIPQMLRDLKILHKLGIVPRDVKPRNYR--------GGKLVDFSSS  206 (207)
T ss_pred             h----HHHHHHHHHHHHHHCCeeeccCcccccc--------CCEEEecccC
Confidence            3    3456777788899999999999999987        1479999864

>PRK05231 homoserine kinase; Provisional

Probab=94.58  E-value=0.16  Score=41.75  Aligned_cols=30  Identities=27%  Similarity=0.418  Sum_probs=24.9

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .|++|+|+.+.||+++.+   ....++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~---~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGD---RLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECC---ceEEEEeccccc
Confidence            489999999999999744   445899999874

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=94.53  E-value=0.067  Score=42.82  Aligned_cols=49  Identities=22%  Similarity=0.400  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhC--CccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          67 KTVLMLADQMISRLEHVHRK--KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        67 ~~~~~~~~~i~~~l~~lh~~--~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      ......+..+-.++.-.+..  -++|+|+.|.|++.+..   +.+.|+||..+.
T Consensus       132 ~~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~---~~l~LIDWEyAg  182 (269)
T COG0510         132 HLLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDK---GGLFLIDWEYAG  182 (269)
T ss_pred             HHHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCC---CcEEEEecccCC
Confidence            34444555555666555544  58999999999999765   789999999874

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=94.24  E-value=0.45  Score=39.73  Aligned_cols=41  Identities=24%  Similarity=0.293  Sum_probs=29.0

Q ss_pred             CCcccccHHHHHHHHHhcCC-C-CCcEEEeeeeeCCccEEEEecc
Q psy2769           7 RNPVQRLFWERNFYEKLHGA-P-GVPHVMGYGTSGDYNILVMELL   49 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~-~-~i~~~~~~~~~~~~~~~v~e~~   49 (257)
                      +-..++..-|...|...... | .+|+++.+-.  ....++||++
T Consensus        40 pl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~--e~~~~vMEdL   82 (370)
T TIGR01767        40 PLTLDRARIESSALIRQGEHVPHLVPRIFHFDT--EMAVTVMEDL   82 (370)
T ss_pred             CCCccHHHHHHHHHHHhhccCccccCeEEEEcc--ccceehHhhC
Confidence            45566778888899887644 3 5788777554  4466889988

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=93.48  E-value=0.21  Score=40.81  Aligned_cols=29  Identities=31%  Similarity=0.583  Sum_probs=24.4

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .+++|||+.+.|++++.    +.+.++||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~----~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD----NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC----CcEEEEECcccc
Confidence            57899999999999974    357899999764

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.35  E-value=0.15  Score=41.50  Aligned_cols=32  Identities=25%  Similarity=0.399  Sum_probs=25.0

Q ss_pred             CccccCCCCCceEeecc-CCCCeEEEEeCCcce
Q psy2769          87 KIVHRDIKPDNFLMGVR-ENFNTVYLVDFGLAV  118 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~-~~~~~~~l~df~~~~  118 (257)
                      +++|+|+.+.||+++.+ ...+.+.++||+.+.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            57999999999999742 012568999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK10271 thiK thiamine kinase; Provisional

Probab=93.19  E-value=0.089  Score=39.49  Aligned_cols=29  Identities=24%  Similarity=0.430  Sum_probs=24.0

Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      -.+|+|+.|.|+++..+   + ++++||+.+..
T Consensus        78 ~p~H~D~~~~N~~~~~~---~-~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSAS---G-LRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECC---C-EEEEeCCcccC
Confidence            35899999999998654   4 88999998743

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=92.53  E-value=0.068  Score=41.04  Aligned_cols=30  Identities=33%  Similarity=0.525  Sum_probs=19.6

Q ss_pred             CccccCCCCCceEe-eccCCCCeEEEEeCCccee
Q psy2769          87 KIVHRDIKPDNFLM-GVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        87 ~i~H~dl~~~nili-~~~~~~~~~~l~df~~~~~  119 (257)
                      .++|+|+.+.||++ ..+   +.++++||..+..
T Consensus       144 v~cHnDl~~~Nil~~~~~---~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKD---GEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSS---SCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCC---CeEEEecHHHHhh
Confidence            57899999999999 434   7899999998753

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=92.27  E-value=0.35  Score=36.69  Aligned_cols=34  Identities=24%  Similarity=0.369  Sum_probs=26.2

Q ss_pred             hCCccccCCCCCceEeeccCC--CCeEEEEeCCcce
Q psy2769          85 RKKIVHRDIKPDNFLMGVREN--FNTVYLVDFGLAV  118 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~--~~~~~l~df~~~~  118 (257)
                      ...++|||+.+.|+++..++.  ...+.++||..+.
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            346899999999999976422  1268999999874

subfamily of choline kinases

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=92.11  E-value=0.25  Score=40.44  Aligned_cols=29  Identities=24%  Similarity=0.433  Sum_probs=25.6

Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      +++|+|+.++|++++.+   +.+.++||..+.
T Consensus       197 ~lcHgD~~~~Nvl~~~~---~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDET---RGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEcCC---CCEEEEEhhhcc
Confidence            79999999999999765   678999999874

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=91.05  E-value=0.18  Score=40.61  Aligned_cols=31  Identities=26%  Similarity=0.380  Sum_probs=24.6

Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      .++|+|+++.||+++.+  ...+.++||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDED--ARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCC--CCEEEEECcHhccc
Confidence            48999999999999753  13467999998753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02236 choline kinase

Probab=90.97  E-value=0.37  Score=40.15  Aligned_cols=99  Identities=14%  Similarity=0.181  Sum_probs=59.0

Q ss_pred             HHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHH--------------HHHh-cCC------CC-HHHHH
Q psy2769          14 FWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDL--------------FQYC-SKR------FS-LKTVL   70 (257)
Q Consensus        14 ~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~--------------~~~~-~~~------~~-~~~~~   70 (257)
                      .+|..+++.+..+.--+++++.+..+    .|++|+ +.++...              +... ...      ++ .+.+.
T Consensus        84 ~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~  159 (344)
T PLN02236         84 DDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLR  159 (344)
T ss_pred             HHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHH
Confidence            77999999999777778888877543    578887 6554311              1100 001      11 12222


Q ss_pred             HHHHHH-----------------HHHHHHH----H----hCCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          71 MLADQM-----------------ISRLEHV----H----RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        71 ~~~~~i-----------------~~~l~~l----h----~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .+..++                 ...+..|    .    ...++|+|+++.||+++.+  ++.+.++||+.+.
T Consensus       160 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~--~~~~~lID~Eya~  230 (344)
T PLN02236        160 NWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEE--TRAITIIDYEYAS  230 (344)
T ss_pred             HHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCC--CCcEEEEeehhcc
Confidence            332111                 1111111    1    2358999999999999742  2679999999875

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=90.42  E-value=0.41  Score=39.53  Aligned_cols=28  Identities=36%  Similarity=0.553  Sum_probs=24.1

Q ss_pred             ccccCCCCCceEeeccCCCC-eEEEEeCCcce
Q psy2769          88 IVHRDIKPDNFLMGVRENFN-TVYLVDFGLAV  118 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~-~~~l~df~~~~  118 (257)
                      ++|+|+.|+||+++.+   . .+.++||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~---~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDD---TDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCC---CCeeeEEEccccc
Confidence            8999999999999865   3 48899999763

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=89.74  E-value=0.3  Score=37.86  Aligned_cols=84  Identities=18%  Similarity=0.223  Sum_probs=53.6

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--CCc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR--KKI   88 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--~~i   88 (257)
                      -+.++..++.+..   .|+++..-  ......++.|.| .....             ..-.+.. =+.+|..+|+  .+.
T Consensus       104 ~y~nky~v~Armh---GilrL~ND--n~~~yGvIlE~Cy~~~i~-------------~~N~i~a-gi~~L~~fH~~~~~~  164 (308)
T PF07387_consen  104 LYFNKYRVFARMH---GILRLKND--NNYKYGVILERCYKIKIN-------------FSNFITA-GIKDLMDFHSENQHC  164 (308)
T ss_pred             hhhhhhhHHHHhh---heeEeecC--CCceeEEEEeeccCcccc-------------hhHHHHH-hHHHHHHhhccCCCe
Confidence            4566777776665   36666531  333466899998 33211             1111111 1345667783  468


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcc
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLA  117 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~  117 (257)
                      +|||.+|+||+-++.   |.+||.|-+..
T Consensus       165 lHGD~np~NiM~D~~---G~lKlVDP~~L  190 (308)
T PF07387_consen  165 LHGDCNPDNIMCDKF---GYLKLVDPVCL  190 (308)
T ss_pred             ecCCCChhheeecCC---CCEEecChhhh
Confidence            999999999999776   99999998765

The function of this family is unknown.

>PHA03111 Ser/Thr kinase; Provisional

Probab=89.57  E-value=0.97  Score=37.27  Aligned_cols=38  Identities=21%  Similarity=0.273  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHHHHHHHHHH----hCCccccCCCCCceEeecc
Q psy2769          66 LKTVLMLADQMISRLEHVH----RKKIVHRDIKPDNFLMGVR  103 (257)
Q Consensus        66 ~~~~~~~~~~i~~~l~~lh----~~~i~H~dl~~~nili~~~  103 (257)
                      .+-+..++.|++.-.-.+-    ....+|-||||+|||+-.+
T Consensus       278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence            4566777888765442332    3468999999999999865

>KOG4720|consensus

Probab=89.46  E-value=0.99  Score=36.49  Aligned_cols=39  Identities=28%  Similarity=0.288  Sum_probs=30.7

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHH
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLE   54 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~   54 (257)
                      .-.+|+...+.|..|..-+++++-|..+    +++||+ |.+|.
T Consensus       124 dre~Ev~afk~L~a~G~ap~Ly~tF~NG----Lvyefi~g~tL~  163 (391)
T KOG4720|consen  124 DRENEVIAFKLLAAYGFAPKLYGTFNNG----LVYEFIQGKTLE  163 (391)
T ss_pred             ccHHHHHHHHHHHHcCcChhhhheecCc----eEEeeecCcccC
Confidence            3467888899998889999999988643    888888 76653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	257
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		6e-74
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		2e-71
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		9e-71
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		1e-70
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		2e-61
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		1e-60
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		3e-60
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		1e-59
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		2e-59
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		2e-56
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		2e-56
3op5_A	364	Human Vaccinia-Related Kinase 1 Length = 364		1e-26
2kty_A	368	Solution Structure Of Human Vaccinia Related Kinase		2e-26
2lav_A	361	Nmr Solution Structure Of Human Vaccinia-Related Ki		3e-26
2v62_A	345	Structure Of Vaccinia-Related Kinase 2 Length = 345		4e-24
2jii_A	352	Structure Of Vaccinia Related Kinase 3 Length = 352		2e-17
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		9e-10
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-09
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-09
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-08
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		4e-08
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		6e-08
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		7e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		7e-08
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		7e-08
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		9e-08
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-07
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-07
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-07
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-07
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-07
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		1e-07
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-07
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		1e-07
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-07
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-07
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-07
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-07
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-07
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-07
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-07
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-07
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-07
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-07
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-07
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-07
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-07
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-07
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-07
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-07
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-07
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		2e-07
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		2e-07
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-07
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-07
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-07
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-07
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-07
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-07
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		2e-07
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-07
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-07
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		3e-07
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-07
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		3e-07
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-07
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		3e-07
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		3e-07
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-07
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		3e-07
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		3e-07
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		3e-07
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		3e-07
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-07
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-07
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-07
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-07
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-07
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-07
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-07
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-07
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-07
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-07
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		3e-07
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-07
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		4e-07
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		4e-07
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		4e-07
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-07
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		4e-07
4h58_A	275	Braf In Complex With Compound 3 Length = 275		4e-07
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-07
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		4e-07
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		4e-07
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		4e-07
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		4e-07
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		4e-07
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		5e-07
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		5e-07
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		7e-07
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		7e-07
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		7e-07
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		7e-07
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		8e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		9e-07
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		9e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		9e-07
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-06
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-06
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-06
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-06
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-06
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-06
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-06
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-06
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-06
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-06
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-06
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		3e-06
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		3e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		3e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		3e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-06
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-06
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-06
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		4e-06
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		4e-06
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-06
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-06
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		4e-06
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		4e-06
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-06
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		5e-06
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		6e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		6e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		6e-06
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		6e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		7e-06
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		7e-06
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		7e-06
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		8e-06
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		8e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		9e-06
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-05
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-05
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		3e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-05
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		3e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-05
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-05
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		4e-05
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		4e-05
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		4e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-05
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		4e-05
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-05
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		4e-05
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-05
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		4e-05
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		4e-05
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-05
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		5e-05
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		5e-05
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		5e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		5e-05
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-05
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-05
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		5e-05
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-05
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		5e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		5e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		5e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		5e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		5e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		6e-05
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		6e-05
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-05
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		6e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		6e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		6e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		6e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		6e-05
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		6e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		6e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		6e-05
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		6e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		6e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		6e-05
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		6e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		6e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		6e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		6e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		7e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		7e-05
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		7e-05
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		7e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		7e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		8e-05
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		8e-05
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		9e-05
3kk8_A	284	Camkii Substrate Complex A Length = 284		9e-05
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-04
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-04
3kk9_A	282	Camkii Substrate Complex B Length = 282		1e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-04
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		1e-04
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		1e-04
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-04
3soa_A	444	Full-Length Human Camkii Length = 444		1e-04
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		1e-04
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-04
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-04
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-04
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-04
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-04
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		1e-04
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		1e-04
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-04
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-04
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-04
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-04
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-04
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-04
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-04
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-04
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-04
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-04
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-04
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-04
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-04
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-04
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-04
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-04
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-04
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		2e-04
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-04
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-04
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-04
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-04
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-04
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-04
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-04
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-04
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-04
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-04
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		2e-04
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-04
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-04
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-04
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-04
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		2e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-04
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-04
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		2e-04
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-04
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-04
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		3e-04
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		3e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-04
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		3e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		3e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-04
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		3e-04
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-04
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		3e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-04
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		3e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		3e-04
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		3e-04
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		4e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-04
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		4e-04
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		4e-04
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		4e-04
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		4e-04
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		4e-04
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		4e-04
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		4e-04
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		4e-04
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		4e-04
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		4e-04
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		4e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		4e-04
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		4e-04
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		4e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		4e-04
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		4e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-04
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		4e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		4e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-04
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		5e-04
4exu_A	371	Mapk13, Inactive Form Length = 371		5e-04
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		5e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		5e-04
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		5e-04
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		5e-04
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		5e-04
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		5e-04
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		5e-04
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		5e-04
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		6e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		6e-04
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-04
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		6e-04
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		6e-04
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		6e-04
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		6e-04
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		6e-04
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		6e-04
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		6e-04
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		6e-04
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		6e-04
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-04
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		6e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		7e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		7e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		7e-04
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		7e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		7e-04
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		8e-04
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		8e-04
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		8e-04
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		8e-04
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		8e-04
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		8e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		8e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		8e-04
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		8e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		8e-04
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		8e-04
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		8e-04
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		8e-04
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		8e-04
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		8e-04
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		8e-04
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		8e-04
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		8e-04
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		8e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		8e-04
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		8e-04
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		8e-04
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		8e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		8e-04
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		8e-04
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		8e-04
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		8e-04
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		8e-04
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		8e-04
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		8e-04
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		8e-04
3hec_A	348	P38 In Complex With Imatinib Length = 348		8e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		8e-04
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		8e-04
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		8e-04
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		8e-04
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		8e-04
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		8e-04
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		8e-04
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		8e-04
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		8e-04
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		8e-04
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		8e-04
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		8e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-04
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		9e-04
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		9e-04
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		9e-04
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		9e-04
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		9e-04
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		9e-04
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		9e-04
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		9e-04
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		9e-04

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score =  273 bits (698), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 130/259 (50%), Positives = 178/259 (68%), Gaps = 5/259 (1%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y  L G  G+P+V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFC 96
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++ SLKTVLMLADQMI+R+E VH K  +HRDIKPDNFLMG+    N VY++DFGLA  +
Sbjct: 97  SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156
Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYASVN H  ++QS RDDLE+L Y L+YFLRG LPWQ +
Sbjct: 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216
Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K+  + EA+C G P EFA +  YCR L F ++P+Y  L+  FR+L
Sbjct: 217 KAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276
Query: 237 LENKERCEFDLRYDWTLLE 255
              +E  +FD  +DWT+L+
Sbjct: 277 FI-REGFQFDYVFDWTILK 294

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 123/259 (47%), Positives = 177/259 (68%), Gaps = 5/259 (1%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L  E  FY+ + G  G+P +   G  GDYN++VMELLGPSLEDLF +C
Sbjct: 39  IKLECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFC 98
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++FSLKTVL+LADQMISR+E++H K  +HRD+KPDNFLMG+ +  N VY++DFGLA  +
Sbjct: 99  SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158
Query: 121 ----CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YF  G LPWQ +
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218
Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  +  + +R++E K++   E +C+G P EF+ +L +CR L F ++P+Y  LR  FRNL
Sbjct: 219 KAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNL 278
Query: 237 LENKERCEFDLRYDWTLLE 255
             +++   +D  +DW +L+
Sbjct: 279 F-HRQGFSYDYVFDWNMLK 296

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score =  263 bits (671), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 123/259 (47%), Positives = 176/259 (67%), Gaps = 5/259 (1%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L  E   Y+ + G  G+P +   G  GDYN++VMELLGPSLEDLF +C
Sbjct: 37  IKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFC 96
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++FSLKTVL+LADQMISR+E++H K  +HRD+KPDNFLMG+ +  N VY++DFGLA  +
Sbjct: 97  SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 156
Query: 121 ----CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YF  G LPWQ +
Sbjct: 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 216
Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  +  + +R++E K++   E +C+G P EFA +L +CR L F ++P+Y  LR  FRNL
Sbjct: 217 KAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276
Query: 237 LENKERCEFDLRYDWTLLE 255
             +++   +D  +DW +L+
Sbjct: 277 F-HRQGFSYDYVFDWNMLK 294

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score =  263 bits (671), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 123/259 (47%), Positives = 176/259 (67%), Gaps = 5/259 (1%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L  E   Y+ + G  G+P +   G  GDYN++VMELLGPSLEDLF +C
Sbjct: 39  IKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFC 98
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++FSLKTVL+LADQMISR+E++H K  +HRD+KPDNFLMG+ +  N VY++DFGLA  +
Sbjct: 99  SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158
Query: 121 ----CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YF  G LPWQ +
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218
Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  +  + +R++E K++   E +C+G P EFA +L +CR L F ++P+Y  LR  FRNL
Sbjct: 219 KAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278
Query: 237 LENKERCEFDLRYDWTLLE 255
             +++   +D  +DW +L+
Sbjct: 279 F-HRQGFSYDYVFDWNMLK 296

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score =  231 bits (590), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 121/259 (46%), Positives = 169/259 (65%), Gaps = 8/259 (3%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGA-PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQY 59
           +K+EP+++   +L  E  FY++L  A  G+P V  +G  G YN +V+ELLGPSLEDLF  
Sbjct: 30  IKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYYFGPXGKYNAMVLELLGPSLEDLFDL 89
Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENF--NTVYLVDFGLA 117
           C + F+LKTVLM+A Q++SR+E+VH K +++RD+KP+NFL+G + N   + ++++DFGLA
Sbjct: 90  CDRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
Query: 118 VDFC-PNCPPRIRTR---GLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
            ++  P     I  R    LTGTARY S+N H   +QS RDDLEAL +  +YFLRG LPW
Sbjct: 150 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 209
Query: 174 QSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSF 233
           Q +K+D  + R Q++ + K     EA+CE  P E A +LRY R L F E+P+Y  LR  F
Sbjct: 210 QGLKADTLKERYQKIGDTKRNTPIEALCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLF 269
Query: 234 RNLLENKERCEFDLRYDWT 252
            +L E K    FD  YDW 
Sbjct: 270 TDLFEKKGYT-FDYAYDWV 287

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score =  229 bits (583), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/258 (45%), Positives = 166/258 (64%), Gaps = 7/258 (2%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+EP+++   +L  E  FY++L    GVP V  +G  G YN +V+ELLGPSLEDLF  C
Sbjct: 34  IKLEPIKSRAPQLHLEYRFYKQLSATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLC 93
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG--VRENFNTVYLVDFGLAV 118
            + F+LKTVLM+A Q+I+R+E+VH K +++RD+KP+NFL+G    +  + ++++DFGLA 
Sbjct: 94  DRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAK 153
Query: 119 DFC-PNCPPRIRTR---GLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
           ++  P     I  R    LTGTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 154 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 213
Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+D  + R Q++ + K     E +CE  P E A +LRY R L F E+P+Y  LR  F 
Sbjct: 214 GLKADTLKERYQKIGDTKRATPIEVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFT 273
Query: 235 NLLENKERCEFDLRYDWT 252
           +L  ++    FD  YDW 
Sbjct: 274 DLF-DRSGFVFDYEYDWA 290

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 120/257 (46%), Positives = 165/257 (64%), Gaps = 8/257 (3%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+EP+++   +L  E  FY++L    G+P V  +G  G YN +V+ELLGPSLEDLF  C
Sbjct: 39  IKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLC 98
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENF--NTVYLVDFGLAV 118
            + FSLKTVLM+A Q+ISR+E+VH K +++RD+KP+NFL+G   N     ++++DFGLA 
Sbjct: 99  DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
Query: 119 DFC-PNCPPRIRTR---GLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
           ++  P     I  R    LTGTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+D  + R Q++ + K     E +CE   PE A +LRY R L F E+P+Y  LR  F 
Sbjct: 219 GLKADTLKERYQKIGDTKRATPIEVLCENF-PEMATYLRYVRRLDFFEKPDYDYLRKLFT 277
Query: 235 NLLENKERCEFDLRYDW 251
           +L + K    FD  YDW
Sbjct: 278 DLFDRKGYM-FDYEYDW 293

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/257 (46%), Positives = 164/257 (63%), Gaps = 8/257 (3%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+EP+++   +L  E  FY++L    G+P V  +G  G YN +V+ELLGPSLEDLF  C
Sbjct: 60  IKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLC 119
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENF--NTVYLVDFGLAV 118
            + FSLKTVLM+A Q+ISR+E+VH K +++RD+KP+NFL+G   N     ++++DF LA 
Sbjct: 120 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 179
Query: 119 DFC-PNCPPRIRTR---GLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
           ++  P     I  R    LTGTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 180 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 239
Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+D  + R Q++ + K     E +CE   PE A +LRY R L F E+P+Y  LR  F 
Sbjct: 240 GLKADTLKERYQKIGDTKRATPIEVLCENF-PEMATYLRYVRRLDFFEKPDYDYLRKLFT 298
Query: 235 NLLENKERCEFDLRYDW 251
           +L + K    FD  YDW
Sbjct: 299 DLFDRKGYM-FDYEYDW 314

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 119/257 (46%), Positives = 164/257 (63%), Gaps = 8/257 (3%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+EP+++   +L  E  FY++L    G+P V  +G  G YN +V+ELLGPSLEDLF  C
Sbjct: 39  IKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLC 98
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENF--NTVYLVDFGLAV 118
            + FSLKTVLM+A Q+ISR+E+VH K +++RD+KP+NFL+G   N     ++++DF LA 
Sbjct: 99  DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
Query: 119 DFC-PNCPPRIRTR---GLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
           ++  P     I  R    LTGTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+D  + R Q++ + K     E +CE   PE A +LRY R L F E+P+Y  LR  F 
Sbjct: 219 GLKADTLKERYQKIGDTKRATPIEVLCENF-PEMATYLRYVRRLDFFEKPDYDYLRKLFT 277
Query: 235 NLLENKERCEFDLRYDW 251
           +L + K    FD  YDW
Sbjct: 278 DLFDRKGYM-FDYEYDW 293

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score =  215 bits (548), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 111/260 (42%), Positives = 159/260 (61%), Gaps = 7/260 (2%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K EP R+   +L  E   Y+ L G  G+P+V  +G  G +N+LV++LLGPSLEDL   C
Sbjct: 40  IKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLC 99
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG--VRENFNTVYLVDFGLAV 118
            ++FS+KTV M A QM++R++ +H K +V+RDIKPDNFL+G    +N N +Y+VDFG+  
Sbjct: 100 GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
Query: 119 DF----CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
            +         P    + L+GTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 219
Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+   + + +R+ E K +     +C G P EF +++ Y R LAF   P+Y  L+  F 
Sbjct: 220 GLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279
Query: 235 NLLENKERCEFDLRYDWTLL 254
            +LE     E D  +DW LL
Sbjct: 280 KVLERLNTTE-DENFDWNLL 298

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score =  215 bits (548), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 111/260 (42%), Positives = 159/260 (61%), Gaps = 7/260 (2%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K EP R+   +L  E   Y+ L G  G+P+V  +G  G +N+LV++LLGPSLEDL   C
Sbjct: 39  IKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLC 98
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG--VRENFNTVYLVDFGLAV 118
            ++FS+KTV M A QM++R++ +H K +V+RDIKPDNFL+G    +N N +Y+VDFG+  
Sbjct: 99  GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
Query: 119 DF----CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
            +         P    + L+GTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 159 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 218
Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+   + + +R+ E K +     +C G P EF +++ Y R LAF   P+Y  L+  F 
Sbjct: 219 GLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 278
Query: 235 NLLENKERCEFDLRYDWTLL 254
            +LE     E D  +DW LL
Sbjct: 279 KVLERLNTTE-DENFDWNLL 297

>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1 Length = 364

Iteration: 1
 Score =  116 bits (290), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 28/256 (10%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAP--------------GVPHVMGYG----TSGDYN 42
           +KVEP  N    LF E  FY++                   GVP   G G        Y 
Sbjct: 70  VKVEPSDN--GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR 127
Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
            ++M+  G  L+ +++  +KRFS KTVL L+ +++  LE++H  + VH DIK  N L+  
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 103 RENFNTVYLVDFGLAVDFCPNCPPRIRT----RGLTGTARYASVNAHQWLDQSPRDDLEA 158
           + N + VYLVD+GLA  +CP    +       R   GT  + S++AH  +  S R DLE 
Sbjct: 188 K-NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEI 246
Query: 159 LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAIC---EGTPPEFAEFLRYC 215
           L Y ++ +L G LPW+    D +  R  ++   +   +    C      P E A+++   
Sbjct: 247 LGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETV 306
Query: 216 RGLAFSEEPNYGKLRD 231
           + L ++E+P Y  LRD
Sbjct: 307 KLLDYTEKPLYENLRD 322

>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1 Length = 368

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 28/256 (10%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAP--------------GVPHVMGYG----TSGDYN 42
           +KVEP  N    LF E  FY++                   GVP   G G        Y 
Sbjct: 70  VKVEPSDNGP--LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR 127
Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
            ++M+  G  L+ +++  +KRFS KTVL L+ +++  LE++H  + VH DIK  N L+  
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 103 RENFNTVYLVDFGLAVDFCPNCPPRIR----TRGLTGTARYASVNAHQWLDQSPRDDLEA 158
           + N + VYLVD+GLA  +CP    +       R   GT  + S++AH  +  S R DLE 
Sbjct: 188 K-NPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEI 246
Query: 159 LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAIC---EGTPPEFAEFLRYC 215
           L Y ++ +L G LPW+    D +  R  ++   +   +    C   +  P E A+++   
Sbjct: 247 LGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETV 306
Query: 216 RGLAFSEEPNYGKLRD 231
           + L ++E+P Y  LRD
Sbjct: 307 KLLDYTEKPLYENLRD 322

>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1 Length = 361

Iteration: 1
 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 28/256 (10%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAP--------------GVPHVMGYG----TSGDYN 42
           +KVEP  N    LF E  FY++                   GVP   G G        Y 
Sbjct: 70  VKVEPSDNGP--LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR 127
Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
            ++M+  G  L+ +++  +KRFS KTVL L+ +++  LE++H  + VH DIK  N L+  
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY 187
Query: 103 RENFNTVYLVDFGLAVDFCPNCPPRIR----TRGLTGTARYASVNAHQWLDQSPRDDLEA 158
           + N + VYLVD+GLA  +CP    +       R   GT  + S++AH  +  S R DLE 
Sbjct: 188 K-NPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEI 246
Query: 159 LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAIC---EGTPPEFAEFLRYC 215
           L Y ++ +L G LPW+    D +  R  ++   +   +    C   +  P E A+++   
Sbjct: 247 LGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETV 306
Query: 216 RGLAFSEEPNYGKLRD 231
           + L ++E+P Y  LRD
Sbjct: 307 KLLDYTEKPLYENLRD 322

>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2 Length = 345

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 17/216 (7%)
Query: 28  GVPHVMGYGTSG----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV 83
           G+P   G G +      Y  +VME LG  L+ +    +  F   TVL L  +M+  LE++
Sbjct: 109 GIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQ-NGTFKKSTVLQLGIRMLDVLEYI 167
Query: 84  HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRT----RGLTGTARY 139
           H  + VH DIK  N L+G + N + VYL D+GL+  +CPN   +       +G  GT  +
Sbjct: 168 HENEYVHGDIKAANLLLGYK-NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEF 226
Query: 140 ASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA 199
            S++AH+ +  S R D+E L Y ++ +L GKLPW+    D     +Q      L   P++
Sbjct: 227 TSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD--PVAVQTAKTNLLDELPQS 284
Query: 200 ICEGTPP-----EFAEFLRYCRGLAFSEEPNYGKLR 230
           + +  P      E A+FL     LA+ E+PNY  L+
Sbjct: 285 VLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALK 320

>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3 Length = 352

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 24/258 (9%)
Query: 12  RLFWERNFYE------------KLHGAP--GVPHVMGYGTSGD-YNILVMELLGPSLEDL 56
           RLF E+NF++            KL+  P   +P  MG+G   D Y  LV+  LG SL+  
Sbjct: 88  RLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSA 147
Query: 57  FQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
                K   S ++VL +A +++  LE +H  + VH ++  +N  +   E+ + V L  +G
Sbjct: 148 LDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD-PEDQSQVTLAGYG 206
Query: 116 LAVDFCPNCPPRIRTRGL----TGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKL 171
            A  +CP+        G      G   + S++ H+    S R DL++L Y ++ +L G L
Sbjct: 207 FAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266
Query: 172 PWQSIKSDNEETRMQR---VTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGK 228
           PW +   + E+   Q+   V +    + P            ++L+    L + E+P Y  
Sbjct: 267 PWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAM 326
Query: 229 LRDSFRNLLENKERCEFD 246
           LR++   LL++     +D
Sbjct: 327 LRNNLEALLQDLRVSPYD 344

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T+    I+     G SL         +F +K ++ +A Q    ++++H K I+HRD
Sbjct: 86  MGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +      NTV + DFGLA +         +   L+G+  + +    +  D +P
Sbjct: 146 LKSNNIFL---HEDNTVKIGDFGLATEKS-RWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFA 209
              + D+ A    L   + G+LP+ +I  +N +  ++ V    L+     +    P    
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 210 EFLRYCRGLAFSEEPNYGKL 229
             +  C      E P++ ++
Sbjct: 260 RLMAECLKKKRDERPSFPRI 279

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 9/200 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +K ++ +A Q    ++++H K I+HRD
Sbjct: 86  MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +      NTV + DFGLA +         +   L+G+  + +    +  D +P
Sbjct: 146 LKSNNIFL---HEDNTVKIGDFGLATEKS-RWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFA 209
              + D+ A    L   + G+LP+ +I  +N +  ++ V    L+     +    P    
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 259
Query: 210 EFLRYCRGLAFSEEPNYGKL 229
             +  C      E P++ ++
Sbjct: 260 RLMAECLKKKRDERPSFPRI 279

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 85/200 (42%), Gaps = 9/200 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +K ++ +A Q    ++++H K I+HRD
Sbjct: 74  MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 133
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +      NTV + DFGLA           +   L+G+  + +    +  D +P
Sbjct: 134 LKSNNIFL---HEDNTVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFA 209
              + D+ A    L   + G+LP+ +I  +N +  ++ V    L+     +    P    
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIEMVGRGSLSPDLSKVRSNCPKRMK 247
Query: 210 EFLRYCRGLAFSEEPNYGKL 229
             +  C      E P++ ++
Sbjct: 248 RLMAECLKKKRDERPSFPRI 267

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANSFV 195
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S         S   DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 250

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 41  YNILVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           +  LVMELL     +LF+   K+  FS      +  +++S + H+H   +VHRD+KP+N 
Sbjct: 80  HTFLVMELLNGG--ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENL 137
Query: 99  LMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRD---D 155
           L     +   + ++DFG A    P+  P ++T     T  YA   A + L+Q+  D   D
Sbjct: 138 LFTDENDNLEIKIIDFGFARLKPPDNQP-LKTPCF--TLHYA---APELLNQNGYDESCD 191
Query: 156 LEALCYTLVYFLRGKLPWQS 175
           L +L   L   L G++P+QS
Sbjct: 192 LWSLGVILYTMLSGQVPFQS 211

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 63  RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCP 122
           RF  +      +++   L + H +K++HRDIKP+N LMG +     + + DFG +V    
Sbjct: 111 RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVH--- 164
Query: 123 NCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL---EALCYTLVYFLRGKLPWQSIKSD 179
              P +R R + GT  Y      +      + DL     LCY    FL G  P+ S  S 
Sbjct: 165 --APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE---FLVGMPPFDS-PSH 218
Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRY 214
            E  R  R+  + L   P  + +G+    ++ LRY
Sbjct: 219 TETHR--RIVNVDLKFPP-FLSDGSKDLISKLLRY 250

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 42/211 (19%)
Query: 38  SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           +G    +VME + G +L D+          + + ++AD     L   H+  I+HRD+KP 
Sbjct: 87  AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIAD-ACQALNFSHQNGIIHRDVKPA 145
Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N L+      N V +VDFG+A     +     +T  + GTA+Y S    +      R D+
Sbjct: 146 NILISAT---NAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 157 EALCYTLVYFLRGKLP----------WQSIKSD-------------------------NE 181
            +L   L   L G+ P          +Q ++ D                         N 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP 262
Query: 182 ETRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
           E R Q   EM+  +    +  G PPE  + L
Sbjct: 263 ENRYQTAAEMRADLV--RVHNGEPPEAPKVL 291

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 63  RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCP 122
           RF  +      +++   L + H +K++HRDIKP+N LMG +     + + DFG +V    
Sbjct: 110 RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVH--- 163
Query: 123 NCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL---EALCYTLVYFLRGKLPWQSIKSD 179
              P +R R + GT  Y      +      + DL     LCY    FL G  P+ S  S 
Sbjct: 164 --APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE---FLVGMPPFDS-PSH 217
Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRY 214
            E  R  R+  + L   P  + +G+    ++ LRY
Sbjct: 218 TETHR--RIVNVDLKFPP-FLSDGSKDLISKLLRY 249

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           KRFS      +  Q+ S + ++H+  IVHRD+KP+N L+  +E    + ++DFGL+  F 
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 122 PNCPPRIRTRGLTGTARYAS 141
            N   + R     GTA Y +
Sbjct: 176 QNTKMKDR----IGTAYYIA 191

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 68  PNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 125
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            KK++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 126 SKKVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRAALCGTLDYLPPEM 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQDTYKRISRVEFTF-PDFVTEGA 233
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 234 RDLISRLLKH 243

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           KRFS      +  Q+ S + ++H+  IVHRD+KP+N L+  +E    + ++DFGL+  F 
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 122 PNCPPRIRTRGLTGTARYAS 141
            N   + R     GTA Y +
Sbjct: 176 QNTKMKDR----IGTAYYIA 191

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           KRFS      +  Q+ S + ++H+  IVHRD+KP+N L+  +E    + ++DFGL+  F 
Sbjct: 116 KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175
Query: 122 PNCPPRIRTRGLTGTARYAS 141
            N   + R     GTA Y +
Sbjct: 176 QNTKMKDR----IGTAYYIA 191

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANAFV 193
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 248

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S LEH+H++ I++RD+KP+N L+   ++   V + D GLAV+       + +T+G  
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG---QTKTKGYA 350
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQS--IKSDNEETRMQRVTEMK 192
           GT  + +       +     D  AL  TL   +  + P+++   K +N+E + QRV E  
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK-QRVLEQA 409
Query: 193 LT 194
           +T
Sbjct: 410 VT 411

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S LEH+H++ I++RD+KP+N L+   ++   V + D GLAV+       + +T+G  
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG---QTKTKGYA 350
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQS--IKSDNEETRMQRVTEMK 192
           GT  + +       +     D  AL  TL   +  + P+++   K +N+E + QRV E  
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK-QRVLEQA 409
Query: 193 LT 194
           +T
Sbjct: 410 VT 411

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S LEH+H++ I++RD+KP+N L+   ++   V + D GLAV+       + +T+G  
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG---QTKTKGYA 350
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQS--IKSDNEETRMQRVTEMK 192
           GT  + +       +     D  AL  TL   +  + P+++   K +N+E + QRV E  
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK-QRVLEQA 409
Query: 193 LT 194
           +T
Sbjct: 410 VT 411

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 130
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 131 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEX 182
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 238
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 239 RDLISRLLKH 248

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S LEH+H++ I++RD+KP+N L+   ++   V + D GLAV+       + +T+G  
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG---QTKTKGYA 350
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQS--IKSDNEETRMQRVTEMK 192
           GT  + +       +     D  AL  TL   +  + P+++   K +N+E + QRV E  
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK-QRVLEQA 409
Query: 193 LT 194
           +T
Sbjct: 410 VT 411

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLN--EDMH-IQITDFGTAKVLSPES-KQARANSFV 192
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 247

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANSFV 196
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 251

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 7/131 (5%)
Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           LVME + GP+L +  +      S+ T +   +Q++  ++H H  +IVHRDIKP N L+  
Sbjct: 88  LVMEYIEGPTLSEYIE-SHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI-- 144
Query: 103 RENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT 162
            ++  T+ + DFG+A           +T  + GT +Y S    +        D+ ++   
Sbjct: 145 -DSNKTLKIFDFGIAKALSETS--LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIV 201
Query: 163 LVYFLRGKLPW 173
           L   L G+ P+
Sbjct: 202 LYEMLVGEPPF 212

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 125
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 126 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRAALCGTLDYLPPEM 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 233
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 234 RDLISRLLKH 243

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 30  PHVMGYGTS---GDYNILVME-LLGPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  S   GD   +VME L G SL D+  + C     +  V     + +  LE +H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 133
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVN 143
             +++HRDIK DN L+G+     +V L DFG    FC    P    R  + GT  + +  
Sbjct: 134 SNQVIHRDIKSDNILLGMD---GSVKLTDFG----FCAQITPEQSKRSXMVGTPYWMAPE 186
Query: 144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                   P+ D+ +L    +  + G+ P+
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 30  PHVMGYGTS---GDYNILVME-LLGPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  S   GD   +VME L G SL D+  + C     +  V     + +  LE +H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 133
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVN 143
             +++HRDIK DN L+G+     +V L DFG    FC    P    R  + GT  + +  
Sbjct: 134 SNQVIHRDIKSDNILLGMD---GSVKLTDFG----FCAQITPEQSKRSEMVGTPYWMAPE 186
Query: 144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                   P+ D+ +L    +  + G+ P+
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 198
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 253

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 30  PHVMGYGTS---GDYNILVME-LLGPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  S   GD   +VME L G SL D+  + C     +  V     + +  LE +H
Sbjct: 78  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 134
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVN 143
             +++HRDIK DN L+G+     +V L DFG    FC    P    R  + GT  + +  
Sbjct: 135 SNQVIHRDIKSDNILLGMD---GSVKLTDFG----FCAQITPEQSKRSXMVGTPYWMAPE 187
Query: 144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                   P+ D+ +L    +  + G+ P+
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 128
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 129 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRAALCGTLDYLPPEM 180
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 236
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 237 RDLISRLLKH 246

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 38  SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           +G    +VME + G +L D+          + + ++AD     L   H+  I+HRD+KP 
Sbjct: 87  AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIAD-ACQALNFSHQNGIIHRDVKPA 145
Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N ++      N V ++DFG+A     +     +T  + GTA+Y S    +      R D+
Sbjct: 146 NIMISA---TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 157 EALCYTLVYFLRGKLPWQSIKSDN 180
            +L   L   L G+ P+     D+
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPDS 226

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 30  PHVMGYGTS---GDYNILVME-LLGPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  S   GD   +VME L G SL D+  + C     +  V     + +  LE +H
Sbjct: 77  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 133
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVN 143
             +++HRDIK DN L+G+     +V L DFG    FC    P    R  + GT  + +  
Sbjct: 134 SNQVIHRDIKSDNILLGMD---GSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPE 186
Query: 144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                   P+ D+ +L    +  + G+ P+
Sbjct: 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 70  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA +         +   L+G+  + +    +  D++P
Sbjct: 130 LKSNNIFL--HEDL-TVKIGDFGLATEKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNP 185
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 200
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 255

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 196
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 251

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 193
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 248

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 98  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA +         +   L+G+  + +    +  D++P
Sbjct: 158 LKSNNIFL--HEDL-TVKIGDFGLATEKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNP 213
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 195
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 250

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 42/211 (19%)
Query: 38  SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           +G    +VME + G +L D+          + + ++AD     L   H+  I+HRD+KP 
Sbjct: 87  AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQALNFSHQNGIIHRDVKPA 145
Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N ++      N V ++DFG+A     +     +T  + GTA+Y S    +      R D+
Sbjct: 146 NIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 157 EALCYTLVYFLRGKLP----------WQSIKSD-------------------------NE 181
            +L   L   L G+ P          +Q ++ D                         N 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP 262
Query: 182 ETRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
           E R Q   EM+  +    +  G PPE  + L
Sbjct: 263 ENRYQTAAEMRADLV--RVHNGEPPEAPKVL 291

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 42/211 (19%)
Query: 38  SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           +G    +VME + G +L D+          + + ++AD     L   H+  I+HRD+KP 
Sbjct: 87  AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQALNFSHQNGIIHRDVKPA 145
Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N ++      N V ++DFG+A     +     +T  + GTA+Y S    +      R D+
Sbjct: 146 NIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 157 EALCYTLVYFLRGKLP----------WQSIKSD-------------------------NE 181
            +L   L   L G+ P          +Q ++ D                         N 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP 262
Query: 182 ETRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
           E R Q   EM+  +    +  G PPE  + L
Sbjct: 263 ENRYQTAAEMRADLV--RVHNGEPPEAPKVL 291

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 195
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 250

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 193
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 248

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           KRFS      +  Q++S + ++H+ KIVHRD+KP+N L+  +     + ++DFGL+  F 
Sbjct: 145 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF- 203
Query: 122 PNCPPRIRTRGLTGTARYAS 141
                +++ +   GTA Y +
Sbjct: 204 -EASKKMKDK--IGTAYYIA 220

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 195
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 250

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLN--EDMH-IQITDFGTAKVLSPES-KQARANXFV 192
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 247

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 193
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 248

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 42/211 (19%)
Query: 38  SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           +G    +VME + G +L D+          + + ++AD     L   H+  I+HRD+KP 
Sbjct: 87  AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQALNFSHQNGIIHRDVKPA 145
Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N ++      N V ++DFG+A     +     +T  + GTA+Y S    +      R D+
Sbjct: 146 NIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 157 EALCYTLVYFLRGKLP----------WQSIKSD-------------------------NE 181
            +L   L   L G+ P          +Q ++ D                         N 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP 262
Query: 182 ETRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
           E R Q   EM+  +    +  G PPE  + L
Sbjct: 263 ENRYQTAAEMRADLV--RVHNGEPPEAPKVL 291

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 90  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 149
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA +         +   L+G+  + +    +  D++P
Sbjct: 150 LKSNNIFL--HEDL-TVKIGDFGLATEKSRWSGSH-QFEQLSGSILWMAPEVIRMQDKNP 205
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T+    I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 70  MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA           +   L+G+  + +    +  D++P
Sbjct: 130 LKSNNIFL--HEDL-TVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           KRFS      +  Q++S + ++H+ KIVHRD+KP+N L+  +     + ++DFGL+  F 
Sbjct: 144 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF- 202
Query: 122 PNCPPRIRTRGLTGTARYAS 141
                +++ +   GTA Y +
Sbjct: 203 -EASKKMKDK--IGTAYYIA 219

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 125
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 126 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTDLCGTLDYLPPEM 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 233
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 234 RDLISRLLKH 243

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLN--EDMH-IQITDFGTAKVLSPES-KQARANXFV 177
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 232

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 126
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 127 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTDLCGTLDYLPPEM 178
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 234
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 235 RDLISRLLKH 244

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           KRFS      +  Q++S + ++H+ KIVHRD+KP+N L+  +     + ++DFGL+  F 
Sbjct: 121 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF- 179
Query: 122 PNCPPRIRTRGLTGTARYAS 141
                +++ +   GTA Y +
Sbjct: 180 -EASKKMKDK--IGTAYYIA 196

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 70  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 127
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 128 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRXXLCGTLDYLPPEM 179
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 235
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 236 RDLISRLLKH 245

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 125
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 126 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTDLCGTLDYLPPEM 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 233
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 234 RDLISRLLKH 243

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLN--EDMH-IQITDFGTAKVLSPES-KQARANXFV 170
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 225

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLN--EDMH-IQITDFGTAKVLSPES-KQARANXFV 173
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 228

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLN--EDMH-IQITDFGTAKVLSPES-KQARANXFV 171
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 226

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           KRFS      +  Q++S + ++H+ KIVHRD+KP+N L+  +     + ++DFGL+  F 
Sbjct: 127 KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF- 185
Query: 122 PNCPPRIRTRGLTGTARYAS 141
                +++ +   GTA Y +
Sbjct: 186 -EASKKMKDK--IGTAYYIA 202

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 130
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 131 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 182
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 238
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 239 RDLISRLLKH 248

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLN--EDMH-IQITDFGTAKVLSPES-KQARANXFV 172
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE    Q++ +++
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEYLIFQKIIKLE 227

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 65  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 122
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 123 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 174
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 230
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 231 RDLISRLLKH 240

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 128
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 129 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 180
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 236
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 237 RDLISRLLKH 246

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 130
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 131 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTDLCGTLDYLPPEM 182
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 238
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 239 RDLISRLLKH 248

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 85  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 142
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 143 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 194
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 250
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 251 RDLISRLLKH 260

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 128
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 129 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 180
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 236
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 237 RDLISRLLKH 246

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 128
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 129 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRXXLCGTLDYLPPEM 180
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 236
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 237 RDLISRLLKH 246

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 126
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 127 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRDTLCGTLDYLPPEM 178
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 234
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 235 RDLISRLLKH 244

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 67  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 124
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 125 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 176
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 232
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 233 RDLISRLLKH 242

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 125
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 126 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRXXLCGTLDYLPPEM 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 233
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 234 RDLISRLLKH 243

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 125
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 126 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 233
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 234 RDLISRLLKH 243

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 98  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA           +   L+G+  + +    +  D++P
Sbjct: 158 LKSNNIFL--HEDL-TVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 97  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 156
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA           +   L+G+  + +    +  D++P
Sbjct: 157 LKSNNIFL--HEDL-TVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 125
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 126 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTXLCGTLDYLPPEM 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 233
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 234 RDLISRLLKH 243

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           KRFS      +  Q++S + + H+ KIVHRD+KP+N L+  +     + ++DFGL+  F 
Sbjct: 121 KRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF- 179
Query: 122 PNCPPRIRTRGLTGTARYAS 141
                  + +   GTA Y +
Sbjct: 180 ---EASKKXKDKIGTAYYIA 196

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 72  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 131
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA           +   L+G+  + +    +  D++P
Sbjct: 132 LKSNNIFL--HEDL-TVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 70  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA           +   L+G+  + +    +  D++P
Sbjct: 130 LKSNNIFL--HEDL-TVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 129
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 130 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 181
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 237
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 238 RDLISRLLKH 247

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 68  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 125
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 126 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTELCGTLDYLPPEM 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 233
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 234 RDLISRLLKH 243

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 38  SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           +G    +VME + G +L D+          + + ++AD     L   H+  I+HRD+KP 
Sbjct: 104 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA-CQALNFSHQNGIIHRDVKPA 162
Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N ++      N V ++DFG+A     +     +T  + GTA+Y S    +      R D+
Sbjct: 163 NIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
Query: 157 EALCYTLVYFLRGKLPW 173
            +L   L   L G+ P+
Sbjct: 220 YSLGCVLYEVLTGEPPF 236

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 75  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA           +   L+G+  + +    +  D++P
Sbjct: 135 LKSNNIFL--HEDL-TVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T     I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 75  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E+  TV + DFGLA           +   L+G+  + +    +  D++P
Sbjct: 135 LKSNNIFL--HEDL-TVKIGDFGLAT-VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ A    L   + G+LP+ +I + ++
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 94  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 151
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 152 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRDDLCGTLDYLPPEM 203
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 259
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 260 RDLISRLLKH 269

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 94  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 151
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 152 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 203
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 259
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 260 RDLISRLLKH 269

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 128
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 129 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRDDLCGTLDYLPPEM 180
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 236
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 237 RDLISRLLKH 246

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 195
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE     ++ +++
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALG-CIIYQLVAGLP--PFRAGNEGLIFAKIIKLE 250

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 69  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 126
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +        P  R   L+GT  Y     
Sbjct: 127 SKRVIHRDIKPENLLLG---SAGELKIADFGWSCH-----APSSRRTTLSGTLDYLPPEM 178
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 234
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 235 RDLISRLLKH 244

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 30  PHVMGYGTS---GDYNILVME-LLGPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  S   GD   +VME L G SL D+  + C     +  V     + +  LE +H
Sbjct: 78  PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 134
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG-LTGTARYASVN 143
             +++HR+IK DN L+G+     +V L DFG    FC    P    R  + GT  + +  
Sbjct: 135 SNQVIHRNIKSDNILLGMD---GSVKLTDFG----FCAQITPEQSKRSTMVGTPYWMAPE 187
Query: 144 AHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                   P+ D+ +L    +  + G+ P+
Sbjct: 188 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E    G   ++L Q  SK F  +       ++ + L + H
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSK-FDEQRTATYITELANALSYCH 130
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 131 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRXXLXGTLDYLPPEM 182
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 238
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 239 RDLISRLLKH 248

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 33/187 (17%)
Query: 67  KTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCP-NCP 125
           K +  +  Q+ S L ++H + I HRDIKP+NFL    ++F  + LVDFGL+ +F   N  
Sbjct: 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF-EIKLVDFGLSKEFYKLNNG 226
Query: 126 PRIRTRGLTGTARYASVNAHQWLDQS--PRDDLEALCYTLVYFLRGKLPWQSIKSDNEET 183
                    GT  + +       ++S  P+ D  +    L   L G +P+  +   N+  
Sbjct: 227 EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGV---NDAD 283
Query: 184 RMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERC 243
            + +V   KL                            E PNY  L    R+LL N    
Sbjct: 284 TISQVLNKKLCF--------------------------ENPNYNVLSPLARDLLSNLLNR 317
Query: 244 EFDLRYD 250
             D R+D
Sbjct: 318 NVDERFD 324

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E    G   ++L Q  SK F  +       ++ + L + H
Sbjct: 73  PNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSK-FDEQRTATYITELANALSYCH 130
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + DFG +V       P  R   L GT  Y     
Sbjct: 131 SKRVIHRDIKPENLLLG---SAGELKIADFGWSVH-----APSSRRTTLCGTLDYLPPEM 182
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 238
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 239 RDLISRLLKH 248

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           +++S LE++H K I+HRD+KP+N L+   E+ + + + DFG A    P    + R     
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILL--NEDMH-IQITDFGTAKVLSPES-KQARANXFV 195
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMK 192
           GTA+Y S             DL AL   ++Y L   LP    ++ NE     ++ +++
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALG-CIIYQLVAGLP--PFRAGNEGLIFAKIIKLE 250

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 70  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 127
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + +FG +V       P  R   L GT  Y     
Sbjct: 128 SKRVIHRDIKPENLLLG---SAGELKIANFGWSVH-----APSSRRTTLCGTLDYLPPEM 179
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 235
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 236 RDLISRLLKH 245

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 20  YEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMI 77
           Y +L   P +  +     S D  I+V+E  G    +LF Y  +R   S +       Q+I
Sbjct: 57  YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG---NELFDYIVQRDKMSEQEARRFFQQII 113
Query: 78  SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           S +E+ HR KIVHRD+KP+N L+   E+ N V + DFGL+
Sbjct: 114 SAVEYCHRHKIVHRDLKPENLLLD--EHLN-VKIADFGLS 150

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L Q  SK F  +       ++ + L + H
Sbjct: 71  PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSK-FDEQRTATYITELANALSYCH 128
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G   +   + + +FG +V       P  R   L GT  Y     
Sbjct: 129 SKRVIHRDIKPENLLLG---SAGELKIANFGWSVH-----APSSRRTTLCGTLDYLPPEM 180
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL GK P++   ++  +   +R++ ++ T  P+ + EG 
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRISRVEFTF-PDFVTEGA 236
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 237 RDLISRLLKH 246

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 20  YEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMI 77
           Y +L   P +  +     S D  I+V+E  G    +LF Y  +R   S +       Q+I
Sbjct: 66  YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG---NELFDYIVQRDKMSEQEARRFFQQII 122
Query: 78  SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           S +E+ HR KIVHRD+KP+N L+   E+ N V + DFGL+
Sbjct: 123 SAVEYCHRHKIVHRDLKPENLLLD--EHLN-VKIADFGLS 159

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 20  YEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMI 77
           Y +L   P +  +     S D  I+V+E  G    +LF Y  +R   S +       Q+I
Sbjct: 67  YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG---NELFDYIVQRDKMSEQEARRFFQQII 123
Query: 78  SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           S +E+ HR KIVHRD+KP+N L+   E+ N V + DFGL+
Sbjct: 124 SAVEYCHRHKIVHRDLKPENLLLD--EHLN-VKIADFGLS 160

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 20  YEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMI 77
           Y +L   P +  +     S D  I+V+E  G    +LF Y  +R   S +       Q+I
Sbjct: 61  YLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG---NELFDYIVQRDKMSEQEARRFFQQII 117
Query: 78  SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           S +E+ HR KIVHRD+KP+N L+   E+ N V + DFGL+
Sbjct: 118 SAVEYCHRHKIVHRDLKPENLLLD--EHLN-VKIADFGLS 154

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 43  ILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +L++E L G  L D       + S   V+    Q    L+H+H   IVH DIKP+N +  
Sbjct: 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCE 183
Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP---RDDLEA 158
            ++  ++V ++DFGLA    P+   ++     T TA +A   A + +D+ P     D+ A
Sbjct: 184 TKKA-SSVKIIDFGLATKLNPDEIVKV----TTATAEFA---APEIVDREPVGFYTDMWA 235
Query: 159 LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
           +       L G  P+     D+ ET +Q V         +A      PE  +F++
Sbjct: 236 IGVLGYVLLSGLSPFAG--EDDLET-LQNVKRCDWEFDEDAFS-SVSPEAKDFIK 286

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/240 (21%), Positives = 102/240 (42%), Gaps = 13/240 (5%)
Query: 11  QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVL 70
           +R+  + +   K H  P +    G   +     + MEL+G   E L +        + + 
Sbjct: 68  KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG 127
Query: 71  MLADQMISRLEHVHRKK-IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
            +   ++  L ++  K  ++HRD+KP N L+  R     + L DFG++     +   + R
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDER---GQIKLCDFGISGRLVDD-KAKDR 183
Query: 130 TRGLTGTARYASVNAHQWL--DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQR 187
           + G         ++       D   R D+ +L  +LV    G+ P+++ K+D E   + +
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE--VLTK 241
Query: 188 VTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDL 247
           V + +  + P  +  G   +F  F++ C      + P Y KL +   + ++  E  E D+
Sbjct: 242 VLQEEPPLLPGHM--GFSGDFQSFVKDCLTKDHRKRPKYNKLLE--HSFIKRYETLEVDV 297

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 7   RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSL 66
           RN V+ +F E    + L     V     +    D  ++V  LLG  L    Q  +  F  
Sbjct: 56  RNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKE 114
Query: 67  KTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP 126
           +TV +   +++  L+++  ++I+HRD+KPDN L+   +    V++ DF +A       P 
Sbjct: 115 ETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAA----MLPR 167
Query: 127 RIRTRGLTGTARYAS---VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEET 183
             +   + GT  Y +    ++ +    S   D  +L  T    LRG+ P+  I+S     
Sbjct: 168 ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH-IRSSTSSK 226
Query: 184 RMQRVTEMKLTMTPEA 199
            +    E  +   P A
Sbjct: 227 EIVHTFETTVVTYPSA 242

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 16  ERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLE-DLFQYCSKRFSLKTVLMLAD 74
           E+   EK++    V     Y T     +++  + G  L+  ++      F     +  A 
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           ++   LE +HR++IV+RD+KP+N L+   ++   + + D GLAV    + P     +G  
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAV----HVPEGQTIKGRV 346
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTE 190
           GT  Y +    +    +   D  AL   L   + G+ P+Q  K   +   ++R+ +
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           FS   +   A ++I  LEH+H + +V+RD+KP N L+   +    V + D GLA DF   
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK 344
Query: 124 CPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEE 182
            P         GT  Y +    Q  +      D  +L   L   LRG  P++  K+ ++ 
Sbjct: 345 KP-----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK- 398
Query: 183 TRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
                +  M LTM  E + +   PE    L
Sbjct: 399 ---HEIDRMTLTMAVE-LPDSFSPELRSLL 424

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           FS   +   A ++I  LEH+H + +V+RD+KP N L+   +    V + D GLA DF   
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK 345
Query: 124 CPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEE 182
            P         GT  Y +    Q  +      D  +L   L   LRG  P++  K+ ++ 
Sbjct: 346 KP-----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK- 399
Query: 183 TRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
                +  M LTM  E + +   PE    L
Sbjct: 400 ---HEIDRMTLTMAVE-LPDSFSPELRSLL 425

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 41  YNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           ++ LV +L+  G   ED+     + +S         Q++  + H+H+  IVHRD+KP+N 
Sbjct: 104 FHYLVFDLVTGGELFEDIV--AREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENL 161
Query: 99  LMGVRENFNTVYLVDFGLAVD 119
           L+  +     V L DFGLA++
Sbjct: 162 LLASKCKGAAVKLADFGLAIE 182

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 8/176 (4%)
Query: 16  ERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLE-DLFQYCSKRFSLKTVLMLAD 74
           E+   EK++    V     Y T     +++  + G  L+  ++      F     +  A 
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           ++   LE +HR++IV+RD+KP+N L+   ++   + + D GLAV    + P     +G  
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAV----HVPEGQTIKGRV 346
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTE 190
           GT  Y +    +    +   D  AL   L   + G+ P+Q  K   +   ++R+ +
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK 402

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           FS   +   A ++I  LEH+H + +V+RD+KP N L+   +    V + D GLA DF   
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK 345
Query: 124 CPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEE 182
            P         GT  Y +    Q  +      D  +L   L   LRG  P++  K+ ++ 
Sbjct: 346 KP-----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK- 399
Query: 183 TRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
                +  M LTM  E + +   PE    L
Sbjct: 400 ---HEIDRMTLTMAVE-LPDSFSPELRSLL 425

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           FS   +   A ++I  LEH+H + +V+RD+KP N L+   +    V + D GLA DF   
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK 345
Query: 124 CPPRIRTRGLTGTARYASVNAHQ-WLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEE 182
            P         GT  Y +    Q  +      D  +L   L   LRG  P++  K+ ++ 
Sbjct: 346 KP-----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK- 399
Query: 183 TRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
                +  M LTM  E + +   PE    L
Sbjct: 400 ---HEIDRMTLTMAVE-LPDSFSPELRSLL 425

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 44  LVMELLGPSLEDLF-QYCSKRFSLKTVLM--LADQMISRLEHVHRK-KIVHRDIKPDNFL 99
           + MEL+  SL+  + Q   K  ++   ++  +A  ++  LEH+H K  ++HRD+KP N L
Sbjct: 83  ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 142
Query: 100 MGVRENFNTVYLVDFGL--------AVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS 151
           +        V + DFG+        A D    C P +    +        +N   +   S
Sbjct: 143 INA---LGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERIN-----PELNQKGY---S 191
Query: 152 PRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEF 211
            + D+ +L  T++     + P+     D+  T  Q++ ++    +P+   +    EF +F
Sbjct: 192 VKSDIWSLGITMIELAILRFPY-----DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDF 246
Query: 212 LRYCRGLAFSEEPNYGKL-RDSFRNLLENK 240
              C      E P Y +L +  F  L E+K
Sbjct: 247 TSQCLKKNSKERPTYPELMQHPFFTLHESK 276

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S + ++H+  IVHRDIKP+N L+  + +   + +VDFGL+  F  +   R R     
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR----L 209
Query: 135 GTARYAS 141
           GTA Y +
Sbjct: 210 GTAYYIA 216

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 7/123 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  L + H   I+HRD+KP+N L+  +EN   V L DFG+A+    +    +   G  
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG---LVAGGRV 194
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT 194
           GT  + +    +        D+      L   L G LP+   K    E   + + + K  
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFEGIIKGKYK 250
Query: 195 MTP 197
           M P
Sbjct: 251 MNP 253

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 63  RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCP 122
           +F+     ++  Q++S + ++H+  IVHRD+KP+N L+  +E    + +VDFGL+  F  
Sbjct: 132 KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-- 189
Query: 123 NCPPRIRTRGLTGTARYAS 141
               +++ R   GTA Y +
Sbjct: 190 ENQKKMKER--LGTAYYIA 206

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E L   L+     C    ++  V +   Q++  L + HR+K++HRD+KP N L+  R
Sbjct: 77  LVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINER 136
Query: 104 ENFNTVYLVDFGLA 117
                  L DFGLA
Sbjct: 137 GELK---LADFGLA 147

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L +    RF  +       ++ + L + H
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--RFDEQRTATYITELANALSYCH 129
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G         + DFG +V       P  R   L GT  Y     
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELK---IADFGWSVH-----APSSRRTTLCGTLDYLPPEM 181
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL G  P+++     +ET  +R++ ++ T  P+ + EG 
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA--HTYQET-YRRISRVEFTF-PDFVTEGA 237
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 238 RDLISRLLKH 247

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 11  QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLK--- 67
           Q L  E   ++ L     V ++  +  +G   I + ++ G SL  L +  SK   LK   
Sbjct: 64  QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR--SKWGPLKDNE 121
Query: 68  -TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP 126
            T+     Q++  L+++H  +IVHRDIK DN L+        + + DFG +       P 
Sbjct: 122 QTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYS--GVLKISDFGTSKRLAGINPC 179
Query: 127 RIRTRGLTGTARYASVNAHQWLDQSPRD-----DLEALCYTLVYFLRGKLPW 173
              T   TGT +Y    A + +D+ PR      D+ +L  T++    GK P+
Sbjct: 180 ---TETFTGTLQYM---APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 20  YEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC--SKRFSLKTVLMLADQMI 77
           Y KL   P +  +    T+    ++V+E  G    +LF Y    KR +         Q+I
Sbjct: 62  YLKLLRHPHIIKLYDVITTPTDIVMVIEYAGG---ELFDYIVEKKRMTEDEGRRFFQQII 118
Query: 78  SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG----- 132
             +E+ HR KIVHRD+KP+N L+   +N N V + DFGL+          I T G     
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLD--DNLN-VKIADFGLS---------NIMTDGNFLKT 166
Query: 133 LTGTARYAS---VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
             G+  YA+   +N   +    P  D+ +    L   L G+LP+
Sbjct: 167 SCGSPNYAAPEVINGKLY--AGPEVDVWSCGIVLYVMLVGRLPF 208

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           ++FS     ++  Q++S   ++H+  IVHRD+KP+N L+  +     + +VDFGL+  F 
Sbjct: 99  QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF- 157
Query: 122 PNCPPRIRTRGLTGTARYAS 141
                +++ R   GTA Y +
Sbjct: 158 -EVGGKMKER--LGTAYYIA 174

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 11  QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLK--- 67
           Q L  E   ++ L     V ++  +  +G   I + ++ G SL  L +  SK   LK   
Sbjct: 50  QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR--SKWGPLKDNE 107
Query: 68  -TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP 126
            T+     Q++  L+++H  +IVHRDIK DN L+        + + DFG +       P 
Sbjct: 108 QTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYS--GVLKISDFGTSKRLAGINPC 165
Query: 127 RIRTRGLTGTARYASVNAHQWLDQSPRD-----DLEALCYTLVYFLRGKLPWQSIKSDNE 181
              T   TGT +Y    A + +D+ PR      D+ +L  T++    GK P+  +     
Sbjct: 166 ---TETFTGTLQYM---APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL--GEP 217
Query: 182 ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
           +  M +V   K+   PE I E    E   F+  C
Sbjct: 218 QAAMFKVGMFKV--HPE-IPESMSAEAKAFILKC 248

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 16/190 (8%)
Query: 27  PGVPHVMGYGTSGDYNILVMEL--LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P +  + GY        L++E   LG    +L +    RF  +       ++ + L + H
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--RFDEQRTATYITELANALSYCH 129
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
            K+++HRDIKP+N L+G         + DFG +V       P  R   L GT  Y     
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELK---IADFGWSVH-----APSSRRDTLCGTLDYLPPEM 181
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +      + DL +L      FL G  P+++     +ET  +R++ ++ T  P+ + EG 
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFEA--HTYQET-YRRISRVEFTF-PDFVTEGA 237
Query: 205 PPEFAEFLRY 214
               +  L++
Sbjct: 238 RDLISRLLKH 247

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           ++FS     ++  Q++S   ++H+  IVHRD+KP+N L+  +     + +VDFGL+  F 
Sbjct: 116 QKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF- 174
Query: 122 PNCPPRIRTRGLTGTARYAS 141
                +++ R   GTA Y +
Sbjct: 175 -EVGGKMKER--LGTAYYIA 191

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 41  YNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           ++ LV +L+  G   ED+     + +S         Q++  + H H   IVHRD+KP+N 
Sbjct: 77  FHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENL 134
Query: 99  LMGVRENFNTVYLVDFGLAVD 119
           L+  +     V L DFGLA++
Sbjct: 135 LLASKSKGAAVKLADFGLAIE 155

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 44  LVMELLGPSLEDLF-QYCSKRFSLKTVLM--LADQMISRLEHVHRK-KIVHRDIKPDNFL 99
           + MEL+  SL+  + Q   K  ++   ++  +A  ++  LEH+H K  ++HRD+KP N L
Sbjct: 127 ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 186
Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY-ASVNAHQWLDQ---SPRDD 155
           +        V + DFG++     +    I      G   Y A    +  L+Q   S + D
Sbjct: 187 INA---LGQVKMCDFGISGYLVDSVAKTID----AGCKPYMAPERINPELNQKGYSVKSD 239
Query: 156 LEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
           + +L  T++     + P+     D+  T  Q++ ++    +P+   +    EF +F   C
Sbjct: 240 IWSLGITMIELAILRFPY-----DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQC 294
Query: 216 RGLAFSEEPNYGKL-RDSFRNLLENK 240
                 E P Y +L +  F  L E+K
Sbjct: 295 LKKNSKERPTYPELMQHPFFTLHESK 320

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 14/180 (7%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNI---LVMELLGP-SLEDL 56
           +K  PV + +Q +  E +  ++       PHV+ Y  S   N    +VME  G  S+ D+
Sbjct: 59  IKQVPVESDLQEIIKEISIMQQCDS----PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114
Query: 57  FQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGL 116
            +  +K  +   +  +    +  LE++H  + +HRDIK  N L+    +     L DFG+
Sbjct: 115 IRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGH---AKLADFGV 171
Query: 117 AVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
           A         R     + GT  + +    Q +  +   D+ +L  T +    GK P+  I
Sbjct: 172 AGQLTDXMAKR---NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 31  HVMGYGTSGDYNILVMELLGPSLEDLFQ-YCSKRFSLKTVLMLADQMISRLEHVHRK-KI 88
           H    G +G + ++V E+LG +L  L + Y  +   L  V  ++ Q++  L+++HR+  I
Sbjct: 94  HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGI 153
Query: 89  VHRDIKPDNFLMGVR---ENFNTVYLVDFGLAVDFCPNCPPRIRTR 131
           +H DIKP+N LM +    EN   + + D G A  +  +    I+TR
Sbjct: 154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 31  HVMGYGTSGDYNILVMELLGPSLEDLFQ-YCSKRFSLKTVLMLADQMISRLEHVHRK-KI 88
           H    G +G + ++V E+LG +L  L + Y  +   L  V  ++ Q++  L+++HR+  I
Sbjct: 94  HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGI 153
Query: 89  VHRDIKPDNFLMGVR---ENFNTVYLVDFGLAVDFCPNCPPRIRTR 131
           +H DIKP+N LM +    EN   + + D G A  +  +    I+TR
Sbjct: 154 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 41  YNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           ++ LV +L+  G   ED+     + +S         Q++  + H H   IVHRD+KP+N 
Sbjct: 77  FHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENL 134
Query: 99  LMGVRENFNTVYLVDFGLAVD 119
           L+  +     V L DFGLA++
Sbjct: 135 LLASKSKGAAVKLADFGLAIE 155

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLK--TVLMLADQMISRLEH 82
           G PGV  ++ +  + +  +LV+E   P+ +DLF Y +++  L          Q+++ ++H
Sbjct: 96  GHPGVIRLLDWFETQEGFMLVLERPLPA-QDLFDYITEKGPLGEGPSRCFFGQVVAAIQH 154
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H + +VHRDIK +N L+ +R       L+DFG
Sbjct: 155 CHSRGVVHRDIKDENILIDLRR--GCAKLIDFG 185

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 69  VLMLADQMISRLEHVHRKKIVHRDIKPDN-FLMGVRENFNTVYLVDFGLAVDFCPNCPPR 127
            L L +Q+   ++++H KK++HRD+KP N FL+  ++    V + DFGL      N   R
Sbjct: 138 ALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ----VKIGDFGLVTSL-KNDGKR 192
Query: 128 IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL 167
            R++   GT RY S       D     DL AL   L   L
Sbjct: 193 TRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 33  MGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRD 92
           MGY T  +  I+     G SL         +F +  ++ +A Q    ++++H K I+HRD
Sbjct: 98  MGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRD 157
Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
           +K +N  +   E   TV + DFGLA           +    TG+  + +    +  D +P
Sbjct: 158 MKSNNIFL--HEGL-TVKIGDFGLAT-VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 153 ---RDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
              + D+ +    L   + G+LP+  I + ++
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 2   KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS 61
           ++E VR   +R   E +   ++ G P +  ++    S  +  LV +L+     +LF Y +
Sbjct: 138 QLEEVREATRR---ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKG--ELFDYLT 192
Query: 62  KRFSL--KTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
           ++ +L  K    +   ++  +  +H   IVHRD+KP+N L+   ++   + L DFG    
Sbjct: 193 EKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFG---- 245
Query: 120 FCPNCPPRIRTRGLTGTARY 139
           F  +  P  + R L GT  Y
Sbjct: 246 FSCHLEPGEKLRELCGTPGY 265

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 61/239 (25%), Positives = 91/239 (38%), Gaps = 36/239 (15%)
Query: 40  DYNILVMEL-LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           +Y  LVME  +G  L  L     +R   +       +++  ++ VHR   VHRDIKPDN 
Sbjct: 134 NYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNI 193
Query: 99  LMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-------DQS 151
           L+   +    + L DFG  +         +R+    GT  Y S    Q +          
Sbjct: 194 LL---DRCGHIRLADFGSCLKL--RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYG 248
Query: 152 PRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEF 211
           P  D  AL         G+ P+    +D+      ++   K  ++   + EG P E  +F
Sbjct: 249 PECDWWALGVFAYEMFYGQTPFY---ADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDF 305
Query: 212 L---------RYCRGLA--FSEEP-----NYGKLRDSFRNLLENKE----RCEFDLRYD 250
           +         R  RG A  F   P     ++  LRDS      + E     C FDL  D
Sbjct: 306 IQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFDLVED 364

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 25/199 (12%)
Query: 44  LVMELLG--PSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           ++ME LG   +L+ L       F + T+L    +++  L+++H +K +HRDIK  N L+ 
Sbjct: 98  IIMEYLGGGSALDLLRAGPFDEFQIATML---KEILKGLDYLHSEKKIHRDIKAANVLLS 154
Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY 161
            + +   V L DFG+A         +I+     GT  + +    Q      + D+ +L  
Sbjct: 155 EQGD---VKLADFGVAGQLTDT---QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGI 208
Query: 162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFS 221
           T +   +G+ P       N +    RV  +     P  +       F EF+  C     +
Sbjct: 209 TAIELAKGEPP-------NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFIDAC----LN 257
Query: 222 EEPNYGKLRDSFRNLLENK 240
           ++P++   R + + LL++K
Sbjct: 258 KDPSF---RPTAKELLKHK 273

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 58  QYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           Q   K  S   V  L  QM++ L + H + +VH+D+KP+N L       + + ++DFGLA
Sbjct: 115 QARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Query: 118 VDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
             F  +      +    GTA Y +    +  D + + D+ +    + + L G LP+
Sbjct: 175 ELFKSDE----HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPF 225

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           +LF + S+R  F+   V +   +++  LEH+H+  I++RDIK +N L+   ++   V L 
Sbjct: 145 ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLT 201
Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE--ALCYTLVYFLRGK 170
           DFGL+ +F  +     R     GT  Y + +  +  D      ++  +L   +   L G 
Sbjct: 202 DFGLSKEFVADETE--RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGA 259
Query: 171 LPWQSIKSDNEETRMQR 187
            P+      N +  + R
Sbjct: 260 SPFTVDGEKNSQAEISR 276

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 11/171 (6%)
Query: 7   RNPVQRLFWERNFYEKLHGAPGVPHVMGY--GTSGDYNILVMELL--GPSLEDLFQYCSK 62
           R P+++++ E    +KL   P V  ++      + D+  +V EL+  GP +E       K
Sbjct: 77  RGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME---VPTLK 132
Query: 63  RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCP 122
             S          +I  +E++H +KI+HRDIKP N L+G       + + DFG++ +F  
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKG 189
Query: 123 NCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
           +      T G        S++  + +      D+ A+  TL  F+ G+ P+
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 17/190 (8%)
Query: 26  APGVPHVMGYGTSGDYNILVMELL-GPSLEDLF--QYCSKRFSLKTVLMLADQMISRLEH 82
           +P +  + G    G +  + MELL G SL  L   Q C         L    Q +  LE+
Sbjct: 144 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC---LPEDRALYYLGQALEGLEY 200
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG--LTGTARYA 140
           +H ++I+H D+K DN L+    + +   L DFG AV   P+   +    G  + GT  + 
Sbjct: 201 LHSRRILHGDVKADNVLL--SSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHM 258
Query: 141 SVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQS-------IKSDNEETRMQRVTEMKL 193
           +           + D+ + C  +++ L G  PW         +K  +E   ++ +     
Sbjct: 259 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCA 318
Query: 194 TMTPEAICEG 203
            +T +AI EG
Sbjct: 319 PLTAQAIQEG 328

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 13  LFWERNFYEKLHGAPGVPHVMGYGTSGDYN--------ILVMELLGPSLEDLFQYCSKR- 63
           +  E  F +KL G P +       + G           +L+ EL    L +  +    R 
Sbjct: 72  IIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG 131
Query: 64  -FSLKTVLMLADQMISRLEHVHRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
             S  TVL +  Q    ++H+HR+K  I+HRD+K +N L+    N  T+ L DFG A 
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFGSAT 186

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 41  YNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           ++ LV +L+  G   ED+     + +S         Q++  + H H+  +VHRD+KP+N 
Sbjct: 77  FHYLVFDLVTGGELFEDIV--AREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENL 134
Query: 99  LMGVRENFNTVYLVDFGLAVD 119
           L+  +     V L DFGLA++
Sbjct: 135 LLASKCKGAAVKLADFGLAIE 155

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 44  LVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVM+L+     +LF    +R  ++ K   ++  Q++S ++++H   IVHRD+KP+N L  
Sbjct: 83  LVMQLVSGG--ELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYL 140
Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTA 137
             E  + + + DFGL+         ++   G+  TA
Sbjct: 141 TPEENSKIMITDFGLS---------KMEQNGIMSTA 167

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
           Q++  + H H+  +VHRD+KP+N L+  +     V L DFGLA++
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE 173

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MX 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEE 182
           GT  Y +    +  +  +   D+ +    L   L G+LPW       +E
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L  +H + ++HRDIK D+
Sbjct: 220 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 277
Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   V L DFG         P   R + L GT  + +      L   P  D+ 
Sbjct: 278 ILL---THDGRVKLSDFGFCAQVSKEVP---RRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 332 SLGIMVIEMVDGEPPY 347

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L  +H + ++HRDIK D+
Sbjct: 143 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 200
Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   V L DFG         P   R + L GT  + +      L   P  D+ 
Sbjct: 201 ILL---THDGRVKLSDFGFCAQVSKEVP---RRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 255 SLGIMVIEMVDGEPPY 270

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 27  PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK 86
           P +  +  +  + DY I++  + G  L D     +KR    T  +   QM+  ++++H  
Sbjct: 200 PCIIKIKNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHEN 258
Query: 87  KIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            I+HRD+KP+N L+  +E    + + DFG
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDFG 287

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 17/190 (8%)
Query: 26  APGVPHVMGYGTSGDYNILVMELL-GPSLEDLF--QYCSKRFSLKTVLMLADQMISRLEH 82
           +P +  + G    G +  + MELL G SL  L   Q C         L    Q +  LE+
Sbjct: 125 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC---LPEDRALYYLGQALEGLEY 181
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG--LTGTARYA 140
           +H ++I+H D+K DN L+    + +   L DFG AV   P+   +    G  + GT  + 
Sbjct: 182 LHSRRILHGDVKADNVLL--SSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHM 239
Query: 141 SVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQS-------IKSDNEETRMQRVTEMKL 193
           +           + D+ + C  +++ L G  PW         +K  +E   ++ +     
Sbjct: 240 APEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCA 299
Query: 194 TMTPEAICEG 203
            +T +AI EG
Sbjct: 300 PLTAQAIQEG 309

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           DLF   SK   F+ + V     ++   L+H+H   I++RD+KP+N L+   +    + L 
Sbjct: 112 DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLT 168
Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLP 172
           DFGL+ +   +     +     GT  Y +         +   D  +    +   L G LP
Sbjct: 169 DFGLSKE---SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
Query: 173 WQSIKSDNEETRMQRVTEMKLTM----TPEA 199
           +Q    D +ET M  + + KL M    +PEA
Sbjct: 226 FQG--KDRKET-MTMILKAKLGMPQFLSPEA 253

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E + P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 71  GFSGVIRLLDWFERPDSFVLILERMEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 130 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 160

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           DLF   SK   F+ + V     ++   L+H+H   I++RD+KP+N L+   +    + L 
Sbjct: 113 DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLT 169
Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLP 172
           DFGL+ +   +     +     GT  Y +         +   D  +    +   L G LP
Sbjct: 170 DFGLSKE---SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
Query: 173 WQSIKSDNEETRMQRVTEMKLTM----TPEA 199
           +Q    D +ET M  + + KL M    +PEA
Sbjct: 227 FQG--KDRKET-MTMILKAKLGMPQFLSPEA 254

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 13/172 (7%)
Query: 44  LVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVMEL      +LF+    +  F       +   ++S + + H+  + HRD+KP+NFL  
Sbjct: 83  LVMELCTGG--ELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL 140
Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY 161
                + + L+DFGLA  F P     +RT+   GT  Y S    + L     D+  A   
Sbjct: 141 TDSPDSPLKLIDFGLAARFKPG--KMMRTK--VGTPYYVSPQVLEGLYGPECDEWSA--G 194
Query: 162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
            ++Y L    P  S  +D E   M ++ E   T  PE       P+    +R
Sbjct: 195 VMMYVLLCGYPPFSAPTDXE--VMLKIREGTFTF-PEKDWLNVSPQAESLIR 243

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           DLF   SK   F+ + V     ++   L+H+H   I++RD+KP+N L+   +    + L 
Sbjct: 112 DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLT 168
Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLP 172
           DFGL+ +   +     +     GT  Y +         +   D  +    +   L G LP
Sbjct: 169 DFGLSKE---SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
Query: 173 WQSIKSDNEETRMQRVTEMKLTM----TPEA 199
           +Q    D +ET M  + + KL M    +PEA
Sbjct: 226 FQG--KDRKET-MTMILKAKLGMPQFLSPEA 253

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+     +L Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 LVMELMDA---NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLAVDFCPN--CPPRIRTR 131
           ++  T+ ++DFGLA   C N    P + TR
Sbjct: 160 KSDCTLKILDFGLARTACTNFMMTPYVVTR 189

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 27  PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK 86
           P +  +  +  + DY I++  + G  L D     +KR    T  +   QM+  ++++H  
Sbjct: 214 PCIIKIKNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHEN 272
Query: 87  KIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            I+HRD+KP+N L+  +E    + + DFG
Sbjct: 273 GIIHRDLKPENVLLSSQEEDCLIKITDFG 301

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K+IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMN---IKIADFGFSNEFTVGG----KLDAFC 174
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G   YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 13/172 (7%)
Query: 44  LVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVMEL      +LF+    +  F       +   ++S + + H+  + HRD+KP+NFL  
Sbjct: 100 LVMELCTGG--ELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL 157
Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY 161
                + + L+DFGLA  F P     +RT+   GT  Y S    + L     D+  A   
Sbjct: 158 TDSPDSPLKLIDFGLAARFKPG--KMMRTK--VGTPYYVSPQVLEGLYGPECDEWSA--G 211
Query: 162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
            ++Y L    P  S  +D E   M ++ E   T  PE       P+    +R
Sbjct: 212 VMMYVLLCGYPPFSAPTDXE--VMLKIREGTFTF-PEKDWLNVSPQAESLIR 260

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 18/192 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 83  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 141
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++     +           GT  Y S   
Sbjct: 142 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 193
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            Q    S + D+ ++  +LV    G+ P   I S +    +  + +  +   P  +  G 
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYP---IGSGSGSMAIFELLDYIVNEPPPKLPSGV 250
Query: 205 -PPEFAEFLRYC 215
              EF +F+  C
Sbjct: 251 FSLEFQDFVNKC 262

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L  +H + ++HRDIK D+
Sbjct: 100 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 157
Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   V L DFG         P   R + L GT  + +      L   P  D+ 
Sbjct: 158 ILL---THDGRVKLSDFGFCAQVSKEVP---RRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 212 SLGIMVIEMVDGEPPY 227

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MX 168
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 8   NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLK 67
           +P   +  E    +KL+  P +  +  +  + DY I++  + G  L D     +KR    
Sbjct: 57  DPALNVETEIEILKKLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEA 114
Query: 68  TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
           T  +   QM+  ++++H   I+HRD+KP+N L+  +E    + + DFG
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 8   NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLK 67
           +P   +  E    +KL+  P +  +  +  + DY I++  + G  L D     +KR    
Sbjct: 57  DPALNVETEIEILKKLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEA 114
Query: 68  TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
           T  +   QM+  ++++H   I+HRD+KP+N L+  +E    + + DFG
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 8   NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLK 67
           +P   +  E    +KL+  P +  +  +  + DY I++  + G  L D     +KR    
Sbjct: 56  DPALNVETEIEILKKLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEA 113
Query: 68  TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
           T  +   QM+  ++++H   I+HRD+KP+N L+  +E    + + DFG
Sbjct: 114 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 161

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 27  PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK 86
           P +  +  +  + DY I++  + G  L D     +KR    T  +   QM+  ++++H  
Sbjct: 75  PCIIKIKNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 87  KIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            I+HRD+KP+N L+  +E    + + DFG
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFG 162

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 84  HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           H+  I HRD K  N L+   ++  T  L DFGLAV F P  PP   T G  GT RY +
Sbjct: 140 HKPSIAHRDFKSKNVLL---KSDLTAVLADFGLAVRFEPGKPPG-DTHGQVGTRRYMA 193

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 168
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 168
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MX 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 168
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MX 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MX 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 69  VLMLADQMISRLEHVHRKKIVHRDIKPDN-FLMGVRENFNTVYLVDFGLAVDFCPNCPPR 127
            L L +Q+   ++++H KK+++RD+KP N FL+  ++    V + DFGL      N   R
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ----VKIGDFGLVTSL-KNDGKR 178
Query: 128 IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL 167
            R++   GT RY S       D     DL AL   L   L
Sbjct: 179 XRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K+IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDADMN---IKIADFGFSNEFTVGG----KLDTFC 171
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G+  YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L  +H + ++HRDIK D+
Sbjct: 98  GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 155
Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   V L DFG         P   R + L GT  + +      L   P  D+ 
Sbjct: 156 ILL---THDGRVKLSDFGFCAQVSKEVP---RRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 210 SLGIMVIEMVDGEPPY 225

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 168
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 168
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 8   NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLK 67
           +P   +  E    +KL+  P +  +  +  + DY I++  + G  L D     +KR    
Sbjct: 63  DPALNVETEIEILKKLN-HPCIIKIKNFFDAEDYYIVLELMEGGELFDKV-VGNKRLKEA 120
Query: 68  TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
           T  +   QM+  ++++H   I+HRD+KP+N L+  +E    + + DFG
Sbjct: 121 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG 168

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 168
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L  +H + ++HRDIK D+
Sbjct: 89  GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 146
Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   V L DFG         P   R + L GT  + +      L   P  D+ 
Sbjct: 147 ILL---THDGRVKLSDFGFCAQVSKEVP---RRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 201 SLGIMVIEMVDGEPPY 216

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L  +H + ++HRDIK D+
Sbjct: 93  GDELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS 150
Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   V L DFG         P   R + L GT  + +      L   P  D+ 
Sbjct: 151 ILL---THDGRVKLSDFGFCAQVSKEVP---RRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 205 SLGIMVIEMVDGEPPY 220

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 168
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 111 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 166
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q+++ + ++H   I HRDIKP+N L+  R+N     + DFGLA  F  N   R+  + + 
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDERDNLK---ISDFGLATVFRYNNRERLLNK-MC 167
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           GT  Y +    +  +  +   D+ +    L   L G+LPW
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S+RF        A ++IS L  +H K I++RD+K DN L+   ++     L DFG+  + 
Sbjct: 118 SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEG 174
Query: 121 CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDN 180
             N    + T    GT  Y +    Q +   P  D  A+   L   L G  P+++   D+
Sbjct: 175 ICN---GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD 231

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
           Q++  + + H   IVHR++KP+N L+  +     V L DFGLA++
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 91  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 149
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++     +           GT  Y S   
Sbjct: 150 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 201
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 229

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 184
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++     +           GT  Y S   
Sbjct: 185 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 236
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 264

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 41  YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           Y IL     G   ++L + C+  F  +    + +++   L + H KK++HRDIKP+N L+
Sbjct: 99  YLILEYAPRGELYKELQKSCT--FDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLL 156
Query: 101 GVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL---E 157
                   + + DFG +V       P +R + + GT  Y      +    + + DL    
Sbjct: 157 ---GLKGELKIADFGWSVH-----APSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIG 208
Query: 158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRY 214
            LCY L   L G  P++S  S NE  R  R+ ++ L   P ++  G     ++ LR+
Sbjct: 209 VLCYEL---LVGNPPFES-ASHNETYR--RIVKVDLKF-PASVPTGAQDLISKLLRH 258

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
           Q++  + + H   IVHR++KP+N L+  +     V L DFGLA++
Sbjct: 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
           Q++  + + H   IVHR++KP+N L+  +     V L DFGLA++
Sbjct: 113 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ +  S+  S + V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 110 LVTTLMGADLNNIVK--SQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSN--VAVN 165
Query: 104 ENFNTVYLVDFGLA 117
           E+ + + ++DFGLA
Sbjct: 166 ED-SELRILDFGLA 178

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 LVMELMDANLXQVIQMELDHERMSYLLY---QMLXGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDXTLKILDFGLA 173

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
           Q++  + + H   IVHR++KP+N L+  +     V L DFGLA++
Sbjct: 112 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 156

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 49/239 (20%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 67  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG--------LAVDF----CPNCPPRIRT 130
            H   ++HRDIK +N L+ +  N   + L+DFG        +  DF      + P  IR 
Sbjct: 126 CHNXGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 183
Query: 131 RGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTE 190
                  RY   +A  W        L  L Y +V    G +P++    D E  R Q    
Sbjct: 184 H------RYHGRSAAVW-------SLGILLYDMVC---GDIPFE---HDEEIIRGQVFFR 224
Query: 191 MKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS--FRNLLENKERCEFDL 247
            +++            E    +R+C  L  S+ P + ++++    +++L  +E  E  L
Sbjct: 225 QRVSX-----------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHL 272

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 3   VEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSK 62
            E V+   +    E +   K+ G P +  +     +  +  LV +L+     +LF Y ++
Sbjct: 60  AEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTE 117
Query: 63  RFSL--KTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           + +L  K    +   ++  +  +H+  IVHRD+KP+N L+    N   + L DFG    F
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFG----F 170
Query: 121 CPNCPPRIRTRGLTGTARYAS 141
                P  + R + GT  Y +
Sbjct: 171 SCQLDPGEKLRSVCGTPSYLA 191

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 LVMELMDANLXQVIQMELDHERMSYLLY---QMLXGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDXTLKILDFGLA 173

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 99  LVMELMDANLXQVIQMELDHERMSYLLY---QMLXGIKHLHSAGIIHRDLKPSNI---VV 152
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 153 KSDXTLKILDFGLA 166

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 122
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++     +           GT  Y S   
Sbjct: 123 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
           Q++  + H H+  +VHR++KP+N L+  +     V L DFGLA++
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 122
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++     +           GT  Y S   
Sbjct: 123 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 30/198 (15%)
Query: 52  SLEDLFQYCSKRFSLKTVLM-LADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVY 110
           +L D  + C++      VL+ +A Q+ S +E++ +K  +HRD+   N L+G  EN + V 
Sbjct: 114 NLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG--EN-HVVK 170
Query: 111 LVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ--------SPRDDLEALCYT 162
           + DFGL+         R+ T G T TA   +    +W           S + D+ A    
Sbjct: 171 VADFGLS---------RLMT-GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL 220
Query: 163 LVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFS 221
           L      G  P+  I        +++   M+         EG PP+  E +R C   + +
Sbjct: 221 LWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQP-------EGCPPKVYELMRACWKWSPA 273
Query: 222 EEPNYGKLRDSFRNLLEN 239
           + P++ +   +F  +  +
Sbjct: 274 DRPSFAETHQAFETMFHD 291

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 122
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++     +           GT  Y S   
Sbjct: 123 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 3   VEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSK 62
            E V+   +    E +   K+ G P +  +     +  +  LV +L+     +LF Y ++
Sbjct: 47  AEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTE 104
Query: 63  RFSL--KTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           + +L  K    +   ++  +  +H+  IVHRD+KP+N L+    N   + L DFG    F
Sbjct: 105 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFG----F 157
Query: 121 CPNCPPRIRTRGLTGTARYAS 141
                P  + R + GT  Y +
Sbjct: 158 SCQLDPGEKLREVCGTPSYLA 178

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 9/136 (6%)
Query: 39  GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           GD   +VME L G +L D+  +   R + + +  +   ++  L ++H + ++HRDIK D+
Sbjct: 114 GDELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   + L DFG         P R   + L GT  + +      L      D+ 
Sbjct: 172 ILL---TSDGRIKLSDFGFCAQVSKEVPKR---KXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 158 ALCYTLVYFLRGKLPW 173
           +L   ++  + G+ P+
Sbjct: 226 SLGIMVIEMIDGEPPY 241

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 LVMELMDANLXQVIQMELDHERMSYLLY---QMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDXTLKILDFGLA 173

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 11/143 (7%)
Query: 55  DLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           DLF   SK   F+ + V     ++   L+H+H   I++RD+KP+N L+   +    + L 
Sbjct: 116 DLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL---DEEGHIKLT 172
Query: 113 DFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLP 172
           DFGL+ +   +     +     GT  Y +         S   D  +    +   L G LP
Sbjct: 173 DFGLSKEAIDH---EKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
Query: 173 WQSIKSDNEETRMQRVTEMKLTM 195
           +Q    D +ET M  + + KL M
Sbjct: 230 FQG--KDRKET-MTLILKAKLGM 249

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 173 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 203

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 122
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++     +           GT  Y S   
Sbjct: 123 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 122
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++     +           GT  Y S   
Sbjct: 123 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPER 174
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 202

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLSQVIQMELDHERMSYLLY---QMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 72  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 131 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 161

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 70  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 129 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 159

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLSQVIQMELDHERMSYLLY---QMLVGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLSQVIQMELDHERMSYLLY---QMLVGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLSQVIQMELDHERMSYLLY---QMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLSQVIQMELDHERMSYLLY---QMLVGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDATLKILDFGLA 173

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME +  S  +LF Y  K  R   K    L  Q++S +++ HR  +VHRD+KP+N L+ 
Sbjct: 93  MVMEYV--SGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD 150
Query: 102 VRENFNTVYLVDFGLA 117
              N     + DFGL+
Sbjct: 151 AHMNAK---IADFGLS 163

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 71  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 130 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 160

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 86  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 145 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 175

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 26  APGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           +P +  + G    G +  + MELL G SL  L +        + +  L  Q +  LE++H
Sbjct: 123 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG-QALEGLEYLH 181
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG--LTGTARYASV 142
            ++I+H D+K DN L+    + +   L DFG A+   P+   +    G  + GT  + + 
Sbjct: 182 TRRILHGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 239
Query: 143 NAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                     + D+ + C  +++ L G  PW
Sbjct: 240 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 17/168 (10%)
Query: 18  NFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMI 77
           N +E       +  ++ Y   G+    +  L  P L ++        S   V+ L  Q++
Sbjct: 93  NLHEVYENTSEIILILEYAAGGE----IFSLCLPELAEMV-------SENDVIRLIKQIL 141
Query: 78  SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTA 137
             + ++H+  IVH D+KP N L+        + +VDFG++      C      R + GT 
Sbjct: 142 EGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC----ELREIMGTP 197
Query: 138 RYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRM 185
            Y +     +   +   D+  +       L    P+  +  DN+ET +
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF--VGEDNQETYL 243

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 26/179 (14%)
Query: 72  LADQMISRLEHVHRK-KIVHRDIKPDNFLMGVRENFNTVYLVDFGL--------AVDFCP 122
           +A  ++  LEH+H K  ++HRD+KP N L+        V   DFG+        A D   
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINA---LGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 123 NCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEE 182
            C P      +        +N   +   S + D+ +L  T +     + P+     D+  
Sbjct: 198 GCKPYXAPERIN-----PELNQKGY---SVKSDIWSLGITXIELAILRFPY-----DSWG 244
Query: 183 TRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKL-RDSFRNLLENK 240
           T  Q++ ++    +P+   +    EF +F   C      E P Y +L +  F  L E+K
Sbjct: 245 TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESK 303

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 3   VEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSK 62
            E V+   +    E +   K+ G P +  +     +  +  LV +L+     +LF Y ++
Sbjct: 60  AEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTE 117
Query: 63  RFSL--KTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           + +L  K    +   ++  +  +H+  IVHRD+KP+N L+    N   + L DFG    F
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFG----F 170
Query: 121 CPNCPPRIRTRGLTGTARYAS 141
                P  + R + GT  Y +
Sbjct: 171 SCQLDPGEKLREVCGTPSYLA 191

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 72  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 131 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 161

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 87  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 146 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 176

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 86  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 144
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 145 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 175

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 47/121 (38%), Gaps = 5/121 (4%)
Query: 2   KVEPVRNPVQRL--FWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQY 59
            + P R P  R     E   +EK+   P    +      G    L  EL GPSL+   + 
Sbjct: 90  SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEA 149
Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
                    V       +  L H+H + +VH D+KP N  +G R       L DFGL V+
Sbjct: 150 WGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPR---GRCKLGDFGLLVE 206
Query: 120 F 120
Sbjct: 207 L 207

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 87  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 146 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 176

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 72  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 131 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 161

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 99  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 158 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 188

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           M+  +  +H+  IVH D+KP NFL+        + L+DFG+A    P+    ++   + G
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV-G 218
Query: 136 TARYASVNAHQWLDQSPRD-----------DLEALCYTLVYFLRGKLPWQSI 176
           T  Y    A + +  S  +           D+ +L   L Y   GK P+Q I
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 87  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 145
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 146 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 176

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 173 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 203

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 67  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 126 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 156

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 173 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 203

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 159 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 189

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 99  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 158 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 188

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 99  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 158 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 188

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 159 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 189

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 159 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 189

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 99  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 158 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 188

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 26  APGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           +P +  + G    G +  + MELL G SL  L +        + +  L  Q +  LE++H
Sbjct: 109 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG-QALEGLEYLH 167
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG--LTGTARYASV 142
            ++I+H D+K DN L+    + +   L DFG A+   P+   +    G  + GT  + + 
Sbjct: 168 TRRILHGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 143 NAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                     + D+ + C  +++ L G  PW
Sbjct: 226 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           M+  +  +H+  IVH D+KP NFL+        + L+DFG+A    P+    ++   + G
Sbjct: 117 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV-G 171
Query: 136 TARYASVNAHQWLDQSPRD-----------DLEALCYTLVYFLRGKLPWQSI 176
           T  Y    A + +  S  +           D+ +L   L Y   GK P+Q I
Sbjct: 172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 223

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 49/239 (20%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 94  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG--------LAVDF----CPNCPPRIRT 130
            H   ++HRDIK +N L+ +  N   + L+DFG        +  DF      + P  IR 
Sbjct: 153 CHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 210
Query: 131 RGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTE 190
                  RY   +A  W        L  L Y +V    G +P++    D E  R Q    
Sbjct: 211 H------RYHGRSAAVW-------SLGILLYDMVC---GDIPFE---HDEEIIRGQVFFR 251
Query: 191 MKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS--FRNLLENKERCEFDL 247
            +++            E    +R+C  L  S+ P + ++++    +++L  +E  E  L
Sbjct: 252 QRVSX-----------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHL 299

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 158
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 159 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 189

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +LV E L   L+ L   C       T      Q+++ + + H ++++HRD+KP N L+  
Sbjct: 76  VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 103 RENFNTVYLVDFGLAVDF 120
           RE    + + DFGLA  F
Sbjct: 135 RE--GELKIADFGLARAF 150

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           M+  +  +H+  IVH D+KP NFL+        + L+DFG+A    P+    ++   + G
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV-G 218
Query: 136 TARYASVNAHQWLDQSPRD-----------DLEALCYTLVYFLRGKLPWQSI 176
           T  Y    A + +  S  +           D+ +L   L Y   GK P+Q I
Sbjct: 219 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 164
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 165 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 195

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 67  GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG 115
            H   ++HRDIK +N L+ +  N   + L+DFG
Sbjct: 126 CHNCGVLHRDIKDENILIDL--NRGELKLIDFG 156

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 26  APGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           +P +  + G    G +  + MELL G SL  L +        + +  L  Q +  LE++H
Sbjct: 125 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG-QALEGLEYLH 183
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG--LTGTARYASV 142
            ++I+H D+K DN L+    + +   L DFG A+   P+   +    G  + GT  + + 
Sbjct: 184 TRRILHGDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 241
Query: 143 NAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
                     + D+ + C  +++ L G  PW
Sbjct: 242 EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           M+  +  +H+  IVH D+KP NFL+        + L+DFG+A    P+    ++   + G
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV-G 190
Query: 136 TARYASVNAHQWLDQSPRD-----------DLEALCYTLVYFLRGKLPWQSI 176
           T  Y    A + +  S  +           D+ +L   L Y   GK P+Q I
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +LV E L   L+ L   C       T      Q+++ + + H ++++HRD+KP N L+  
Sbjct: 76  VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 103 RENFNTVYLVDFGLAVDF 120
           RE    + + DFGLA  F
Sbjct: 135 RE--GELKIADFGLARAF 150

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +LV E L   L+ L   C       T      Q+++ + + H ++++HRD+KP N L+  
Sbjct: 76  VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN- 134
Query: 103 RENFNTVYLVDFGLAVDF 120
           RE    + + DFGLA  F
Sbjct: 135 RE--GELKIADFGLARAF 150

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 44  LVMELLGPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVM+L+  S  +LF    ++  ++ K    L  Q++  + ++HR  IVHRD+KP+N L  
Sbjct: 97  LVMQLV--SGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYY 154
Query: 102 VRENFNTVYLVDFGLA 117
            ++  + + + DFGL+
Sbjct: 155 SQDEESKIMISDFGLS 170

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           M+  +  +H+  IVH D+KP NFL+        + L+DFG+A    P+    ++   + G
Sbjct: 116 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV-G 170
Query: 136 TARYASVNAHQWLDQSPRD-----------DLEALCYTLVYFLRGKLPWQSI 176
           T  Y    A + +  S  +           D+ +L   L Y   GK P+Q I
Sbjct: 171 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 222

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 49/239 (20%)
Query: 25  GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD--QMISRLEH 82
           G  GV  ++ +    D  +L++E   P ++DLF + ++R +L+  L  +   Q++  + H
Sbjct: 119 GFSGVIRLLDWFERPDSFVLILERPEP-VQDLFDFITERGALQEELARSFFWQVLEAVRH 177
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFG--------LAVDFCPN---CPPR-IRT 130
            H   ++HRDIK +N L+ +  N   + L+DFG        +  DF       PP  IR 
Sbjct: 178 CHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY 235
Query: 131 RGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTE 190
                  RY   +A  W        L  L Y +V    G +P++    D E  R Q    
Sbjct: 236 H------RYHGRSAAVW-------SLGILLYDMVC---GDIPFE---HDEEIIRGQVFFR 276
Query: 191 MKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS--FRNLLENKERCEFDL 247
            +++            E    +R+C  L  S+ P + ++++    +++L  +E  E  L
Sbjct: 277 QRVSX-----------ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHL 324

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           M+  +  +H+  IVH D+KP NFL+        + L+DFG+A    P+    ++   + G
Sbjct: 120 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV-G 174
Query: 136 TARYASVNAHQWLDQSPRD-----------DLEALCYTLVYFLRGKLPWQSI 176
           T  Y    A + +  S  +           D+ +L   L Y   GK P+Q I
Sbjct: 175 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 226

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLFQYCSKRFSLK-------TVLMLADQMIS 78
           P+++ Y TS    D   LVM+LL G S+ D+ ++   +   K       T+  +  +++ 
Sbjct: 73  PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 79  RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
            LE++H+   +HRD+K  N L+G      +V + DFG++ 
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSA 169

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLSQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXN---IKIADFGFSNEFTFGN----KLDAFC 173
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G   YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +V++L+   L  +  + S+  +L+ V     Q++  L+++H  +++HRD+KP N L  V 
Sbjct: 137 VVLDLMESDLHQII-HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL--VN 193
Query: 104 ENFNTVYLVDFGLAVDFC 121
           EN   + + DFG+A   C
Sbjct: 194 ENCE-LKIGDFGMARGLC 210

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLFQYCSKRFSLK-------TVLMLADQMIS 78
           P+++ Y TS    D   LVM+LL G S+ D+ ++   +   K       T+  +  +++ 
Sbjct: 68  PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 79  RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
            LE++H+   +HRD+K  N L+G      +V + DFG++ 
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSA 164

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 144 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 197
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 198 KSDCTLKILDFGLA 211

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGL--AVD 119
           + F+     ++   + S L+ +H K I HRD+KP+N L       + V + DFGL   + 
Sbjct: 106 RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIK 165
Query: 120 FCPNCPPRIRTRGLT--GTARYASVNAHQWLDQSP-----RDDLEALCYTLVYFLRGKLP 172
              +C P      LT  G+A Y +    +   +       R DL +L   L   L G  P
Sbjct: 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
Query: 173 W 173
           +
Sbjct: 226 F 226

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 44  LVMELLGP-SLEDLFQYCSKRFSLKT--VLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           LVME  G  S+ DL +  +K  +LK   +  +  +++  L H+H+ K++HRDIK  N L+
Sbjct: 104 LVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 162
Query: 101 GVRENFNTVYLVDFGLAVDF 120
              EN   V LVDFG++   
Sbjct: 163 --TENAE-VKLVDFGVSAQL 179

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVM  +G  L  L ++  ++     +  L  QM+  L ++H   I+HRD+KP N  + V 
Sbjct: 107 LVMPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN--LAVN 162
Query: 104 ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL 163
           E+   + ++DFGLA          + TR        A      W+  +   D+ ++   +
Sbjct: 163 EDCE-LKILDFGLARQADSEMXGXVVTRWYR-----APEVILNWMRYTQTVDIWSVGCIM 216
Query: 164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR------YCRG 217
              + GK  +   K  +   +++ +  MK+T TP       P EF + L+      Y +G
Sbjct: 217 AEMITGKTLF---KGSDHLDQLKEI--MKVTGTP-------PAEFVQRLQSDEAKNYMKG 264
Query: 218 LAFSEEPNYGKL 229
           L   E+ ++  +
Sbjct: 265 LPELEKKDFASI 276

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +    R   + +  ++  +I  L ++  
Sbjct: 67  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE 125
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K KI+HRD+KP N L+  R     + L DFG++                 GT  Y S   
Sbjct: 126 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDEM-----ANEFVGTRSYMSPER 177
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 205

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  L + H   I+HRD+KP   L+  +EN   V L  FG+A+    +    +   G  
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES---GLVAGGRV 196
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT 194
           GT  + +    +        D+      L   L G LP+   K    E   + + + K  
Sbjct: 197 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFEGIIKGKYK 252
Query: 195 MTP 197
           M P
Sbjct: 253 MNP 255

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Query: 30  PHVMG-YG---TSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P+++G YG   + G+ +I +  + G SL+ + +  +KR   + +  ++  ++  L ++  
Sbjct: 74  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 86  K-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           K +I+HRD+KP N L+  R     + L DFG++     +           GT  Y +   
Sbjct: 133 KHQIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMAPER 184
Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLP 172
            Q    S + D+ ++  +LV    G+ P
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYP 212

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q       +  +L    QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 LVMELMDANLCQVIQMELDHERMSYLLY---QMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDXTLKILDFGLA 173

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDF--GLAVD 119
           K F+ +    +   + + L+ +H K I HRD+KP+N L    E  + V + DF  G  + 
Sbjct: 106 KHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMK 165
Query: 120 FCPNCPPRIRTRGLT---GTARYASVNAHQ-WLDQSP----RDDLEALCYTLVYFLRGKL 171
              +C P I T  LT   G+A Y +    + + DQ+     R DL +L   L   L G  
Sbjct: 166 LNNSCTP-ITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYP 224
Query: 172 PW 173
           P+
Sbjct: 225 PF 226

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 27  PGVPHVMGYGTSGDYNILVMELLG-PSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVH 84
           P +  ++G  T      +++E +   +L D  + C+++  S   +L +A Q+ S +E++ 
Sbjct: 67  PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           +K  +HRD+   N L+G  EN + V + DFGL+         R+ T G T TA   +   
Sbjct: 127 KKNFIHRDLAARNCLVG--EN-HLVKVADFGLS---------RLMT-GDTXTAHAGAKFP 173
Query: 145 HQWLDQ--------SPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTM 195
            +W           S + D+ A    L      G  P+  I        +++   M+   
Sbjct: 174 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERP- 232
Query: 196 TPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
                 EG P +  E +R C     S+ P++ ++  +F  + +
Sbjct: 233 ------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV +     L  L      +F+L  +  +   +++ L ++HR KI+HRD+K  N L+  R
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI-TR 160
Query: 104 ENFNTVYLVDFGLAVDFC---PNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC 160
           +    + L DFGLA  F     + P R   R +T   R   +   +     P D   A C
Sbjct: 161 D--GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRG 217
                + R  +    ++ + E+ ++  ++++  ++TPE        E  E L   +G
Sbjct: 219 IMAEMWTRSPI----MQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKG 271

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++  L + H   I+HRD+KP   L+  +EN   V L  FG+A+    +    +   G  
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES---GLVAGGRV 194
Query: 135 GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT 194
           GT  + +    +        D+      L   L G LP+   K    E   + + + K  
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK----ERLFEGIIKGKYK 250
Query: 195 MTP 197
           M P
Sbjct: 251 MNP 253

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 55  DLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDF 114
           DL +    +FS + +  L  QM+  L+++H   +VHRD+KP N  + V E+   + ++DF
Sbjct: 114 DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCE-LKILDF 170
Query: 115 GLA 117
           GLA
Sbjct: 171 GLA 173

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----KLDAFC 173
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G   YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV +     L  L      +F+L  +  +   +++ L ++HR KI+HRD+K  N L+  R
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI-TR 160
Query: 104 ENFNTVYLVDFGLAVDFC---PNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC 160
           +    + L DFGLA  F     + P R   R +T   R   +   +     P D   A C
Sbjct: 161 D--GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRG 217
                + R  +    ++ + E+ ++  ++++  ++TPE        E  E L   +G
Sbjct: 219 IMAEMWTRSPI----MQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKG 271

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 39  GDYNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           G +  LV EL+  G  L+ + +   K FS +    +   +   +E++H + +VHRD+KP 
Sbjct: 93  GKHVYLVTELMRGGELLDKILR--QKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPS 150
Query: 97  NFLMGVRENFN--TVYLVDFGLAVDFCPNCPPRIRTR-GLTGTARY-ASVNAHQWLDQSP 152
           N L  V E+ N   + + DFG A         ++R   GL  T  Y A+  A + L +  
Sbjct: 151 NILY-VDESGNPECLRICDFGFA--------KQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 153 RD---DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT 196
            D   D+ +L   L   L G  P+ +  SD  E  + R+   K T++
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS 248

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +V++L+   L  +  + S+  +L+ V     Q++  L+++H  +++HRD+KP N L  V 
Sbjct: 136 VVLDLMESDLHQII-HSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL--VN 192
Query: 104 ENFNTVYLVDFGLAVDFC 121
           EN   + + DFG+A   C
Sbjct: 193 ENCE-LKIGDFGMARGLC 209

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 144 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 197
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 198 KSDCTLKILDFGLA 211

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 39  GDYNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           G +  LV EL+  G  L+ + +   K FS +    +   +   +E++H + +VHRD+KP 
Sbjct: 93  GKHVYLVTELMRGGELLDKILR--QKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPS 150
Query: 97  NFLMGVRENFN--TVYLVDFGLAVDFCPNCPPRIRTR-GLTGTARY-ASVNAHQWLDQSP 152
           N L  V E+ N   + + DFG A         ++R   GL  T  Y A+  A + L +  
Sbjct: 151 NILY-VDESGNPECLRICDFGFA--------KQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 153 RD---DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT 196
            D   D+ +L   L   L G  P+ +  SD  E  + R+   K T++
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS 248

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV +     L  L      +F+L  +  +   +++ L ++HR KI+HRD+K  N L+  R
Sbjct: 101 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI-TR 159
Query: 104 ENFNTVYLVDFGLAVDFC---PNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC 160
           +    + L DFGLA  F     + P R   R +T   R   +   +     P D   A C
Sbjct: 160 D--GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 217
Query: 161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRG 217
                + R  +    ++ + E+ ++  ++++  ++TPE        E  E L   +G
Sbjct: 218 IMAEMWTRSPI----MQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKG 270

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ +  S++ +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK--SQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGL 116
           E+ + + ++DFGL
Sbjct: 160 ED-SELKILDFGL 171

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 106 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 161
Query: 104 ENFNTVYLVDFGLA 117
           E+ + + ++DFGLA
Sbjct: 162 ED-SELKILDFGLA 174

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 12/149 (8%)
Query: 32  VMGYGTSGDYNI-LVMEL-LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV 89
            + Y    D N+ LVM+  +G  L  L      R   +       +M+  ++ VH+   V
Sbjct: 138 TLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYV 197
Query: 90  HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD 149
           HRDIKPDN LM +  +   + L DFG  +    +    +++    GT  Y S    Q ++
Sbjct: 198 HRDIKPDNILMDMNGH---IRLADFGSCLKLMED--GTVQSSVAVGTPDYISPEILQAME 252
Query: 150 Q-----SPRDDLEALCYTLVYFLRGKLPW 173
                  P  D  +L   +   L G+ P+
Sbjct: 253 GGKGRYGPECDWWSLGVCMYEMLYGETPF 281

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 110 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 165
Query: 104 ENFNTVYLVDFGLA 117
           E+ + + ++DFGLA
Sbjct: 166 ED-SELKILDFGLA 178

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 40  DYNILVMELLGPSLEDLFQYCS---KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           D N +VM     S  +LF+  +    + S    +    Q+   L H+H    VH D+KP+
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 284
Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N +   + + N + L+DFGL     P    ++     TGTA +A+    +        D+
Sbjct: 285 NIMFTTKRS-NELKLIDFGLTAHLDPKQSVKV----TTGTAEFAAPEVAEGKPVGYYTDM 339
Query: 157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
            ++       L G  P+     +N++  ++ V      M   A   G   +  +F+R
Sbjct: 340 WSVGVLSYILLSGLSPF---GGENDDETLRNVKSCDWNMDDSAFS-GISEDGKDFIR 392

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 105 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 158
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 159 KSDCTLKILDFGLA 172

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 107 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 160
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 161 KSDCTLKILDFGLA 174

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV +     L  L      +F+L  +  +   +++ L ++HR KI+HRD+K  N L+  R
Sbjct: 102 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI-TR 160
Query: 104 ENFNTVYLVDFGLAVDFC---PNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC 160
           +    + L DFGLA  F     + P R   R +T   R   +   +     P D   A C
Sbjct: 161 D--GVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRG 217
                + R  +    ++ + E+ ++  ++++  ++TPE        E  E L   +G
Sbjct: 219 IMAEMWTRSPI----MQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKG 271

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 100 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 153
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 154 KSDCTLKILDFGLA 167

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C +  S + V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 110 LVTTLMGADLNNIVK-C-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSN--VAVN 165
Query: 104 ENFNTVYLVDFGLA 117
           E+ + + ++DFGLA
Sbjct: 166 ED-SELRILDFGLA 178

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 107 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 160
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 161 KSDCTLKILDFGLA 174

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----KLDTFC 173
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G+  YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 99  LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 152
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 153 KSDCTLKILDFGLA 166

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----KLDTFC 173
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G+  YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 100 LVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 153
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 154 KSDCTLKILDFGLA 167

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           M+  +  +H+  IVH D+KP NFL+        + L+DFG+A    P+    ++   + G
Sbjct: 136 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQV-G 190
Query: 136 TARYASVNAHQWLDQSPRD-----------DLEALCYTLVYFLRGKLPWQSI 176
           T  Y    A + +  S  +           D+ +L   L Y   GK P+Q I
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 242

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMN---IKIADFGFSNEFTVGN----KLDTFC 174
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G+  YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----KLDTFC 173
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G+  YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 20/167 (11%)
Query: 39  GDYNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           G Y  +V EL+  G  L+ + +   K FS +    +   +   +E++H + +VHRD+KP 
Sbjct: 88  GKYVYVVTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPS 145
Query: 97  NFLMGVRENFN--TVYLVDFGLAVDFCPNCPPRIRTR-GLTGTARY-ASVNAHQWLDQSP 152
           N L  V E+ N  ++ + DFG A         ++R   GL  T  Y A+  A + L++  
Sbjct: 146 NILY-VDESGNPESIRICDFGFA--------KQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 153 RD---DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT 196
            D   D+ +L   L   L G  P+ +   D  E  + R+   K +++
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLS 243

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 55  DLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDF 114
           DL +     FS + +  L  QM+  L+++H   +VHRD+KP N  + V E+   + ++DF
Sbjct: 132 DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCE-LKILDF 188
Query: 115 GLA 117
           GLA
Sbjct: 189 GLA 191

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 40  DYNILVMELLGPSLEDLFQYCS---KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           D N +VM     S  +LF+  +    + S    +    Q+   L H+H    VH D+KP+
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 178
Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N +   + + N + L+DFGL     P    ++     TGTA +A+    +        D+
Sbjct: 179 NIMFTTKRS-NELKLIDFGLTAHLDPKQSVKV----TTGTAEFAAPEVAEGKPVGYYTDM 233
Query: 157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
            ++       L G  P+     +N++  ++ V      M   A   G   +  +F+R
Sbjct: 234 WSVGVLSYILLSGLSPF---GGENDDETLRNVKSCDWNMDDSAFS-GISEDGKDFIR 286

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 52  SLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVY 110
           +L D  + C+++  S   +L +A Q+ S +E++ +K  +HRD+   N L+G  EN + V 
Sbjct: 93  NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG--EN-HLVK 149
Query: 111 LVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ--------SPRDDLEALCYT 162
           + DFGL+         R+ T G T TA   +    +W           S + D+ A    
Sbjct: 150 VADFGLS---------RLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 163 LVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFS 221
           L      G  P+  I        +++   M+         EG P +  E +R C     S
Sbjct: 200 LWEIATYGMSPYPGIDPSQVYELLEKDYRMERP-------EGCPEKVYELMRACWQWNPS 252
Query: 222 EEPNYGKLRDSFRNLLE 238
           + P++ ++  +F  + +
Sbjct: 253 DRPSFAEIHQAFETMFQ 269

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----KLDTFC 166
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G+  YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLM--LADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVME  G  L DLF +  +   L   L   +  Q++S + ++  K I+HRDIK +N +  
Sbjct: 106 LVMEKHGSGL-DLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIV-- 162
Query: 102 VRENFNTVYLVDFGLAV 118
           + E+F T+ L+DFG A 
Sbjct: 163 IAEDF-TIKLIDFGSAA 178

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C+K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 100 LVTHLMGADLNNIVK-CAK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 155
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 156 EDCE-LKILDFGLA 168

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 36  GTSGDYNILVMELLGPSL-EDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-KIVHRDI 93
           G +G +  +V E+LG  L + + +   +   L  V  +  Q++  L+++H K +I+H DI
Sbjct: 98  GVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDI 157
Query: 94  KPDNFLMGVRENF 106
           KP+N L+ V E +
Sbjct: 158 KPENILLSVNEQY 170

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 36  GTSGDYNILVMELLGPSL-EDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-KIVHRDI 93
           G +G +  +V E+LG  L + + +   +   L  V  +  Q++  L+++H K +I+H DI
Sbjct: 114 GVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDI 173
Query: 94  KPDNFLMGVRENF 106
           KP+N L+ V E +
Sbjct: 174 KPENILLSVNEQY 186

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
           Q++S +++ H+K IVHRD+K +N L+    N   + + DFG + +F        +     
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGN----KLDEFC 173
Query: 135 GTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPW 173
           G+  YA+    Q      P  D+ +L   L   + G LP+
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+     +L Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 104 LVMELMDA---NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 157
Query: 104 ENFNTVYLVDFGLAVDFCPN--CPPRIRTR 131
           ++  T+ ++DFGLA     N    P + TR
Sbjct: 158 KSDCTLKILDFGLARTASTNFMMTPYVVTR 187

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N ++   
Sbjct: 108 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV--- 161
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 162 KSDCTLKILDFGLA 175

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 133 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 188
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 189 EDCE-LKILDFGLA 201

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 109 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 164
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 165 EDXE-LKILDFGLA 177

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 109 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 164
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 165 EDXE-LKILDFGLA 177

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 115 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 170
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 171 EDXE-LKILDFGLA 183

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 111 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 164
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 165 KSDCTLKILDFGLA 178

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 107 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 160
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 161 KSDCTLKILDFGLA 174

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 100 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 153
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 154 KSDCTLKILDFGLA 167

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ +   ++ +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK--XQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDXE-LKILDFGLA 172

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           M+  +  +H+  IVH D+KP NFL+        + L+DFG+A    P+    ++   + G
Sbjct: 164 MLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV-G 218
Query: 136 TARYASVNAHQWLDQSPRD-----------DLEALCYTLVYFLRGKLPWQSI 176
              Y    A + +  S  +           D+ +L   L Y   GK P+Q I
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 270

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 27  PGVPHVMGYGTSGDYNILVMELLG-PSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVH 84
           P +  ++G  T      +++E +   +L D  + C+++  S   +L +A Q+ S +E++ 
Sbjct: 69  PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           +K  +HRD+   N L+G  EN + V + DFGL+         R+ T G T TA   +   
Sbjct: 129 KKNFIHRDLAARNCLVG--EN-HLVKVADFGLS---------RLMT-GDTYTAHAGAKFP 175
Query: 145 HQWLDQ--------SPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTM 195
            +W           S + D+ A    L      G  P+  I        +++   M+   
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 234
Query: 196 TPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
                 EG P +  E +R C     S+ P++ ++  +F  + +
Sbjct: 235 ------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 1   MKVEPVRNPVQRLFWERNFYEKL--------HGAPGVPHVMGYGTS-GDYN--ILVMELL 49
           + V+ +  P Q L   R  Y +L            G+  V    TS  D++   LV  L+
Sbjct: 48  VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 107
Query: 50  GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTV 109
           G  L ++ + C +  S + V  L  Q++  L+++H   I+HRD+KP N  + V E+   +
Sbjct: 108 GADLNNIVK-C-QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSN--VAVNEDCE-L 162
Query: 110 YLVDFGLA 117
            ++DFGLA
Sbjct: 163 RILDFGLA 170

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 13/119 (10%)
Query: 30  PHVMGYGTS----GDYNILVMELLGPSLEDLFQYCSKRFSL---KTVLMLADQMISRLEH 82
           P+V+ Y  S     + NI++       L  + ++  K+  L   +TV     Q+ S LEH
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 83  VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +H ++++HRDIKP N  +        V L D GL   F            L GT  Y S
Sbjct: 152 MHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKT---TAAHSLVGTPYYMS 204

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+  +L  + Q        + +  L  QM+  ++H+H   I+HRD+KP N    V 
Sbjct: 106 IVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI---VV 159
Query: 104 ENFNTVYLVDFGLA 117
           ++  T+ ++DFGLA
Sbjct: 160 KSDCTLKILDFGLA 173

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 52  SLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVY 110
           +L D  + C+++  S   +L +A Q+ S +E++ +K  +HRD+   N L+G  EN + V 
Sbjct: 93  NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG--EN-HLVK 149
Query: 111 LVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ--------SPRDDLEALCYT 162
           + DFGL+         R+ T G T TA   +    +W           S + D+ A    
Sbjct: 150 VADFGLS---------RLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL 199
Query: 163 LVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFS 221
           L      G  P+  I        +++   M+         EG P +  E +R C     S
Sbjct: 200 LWEIATYGMSPYPGIDPSQVYELLEKDYRMERP-------EGCPEKVYELMRACWQWNPS 252
Query: 222 EEPNYGKLRDSFRNLLE 238
           + P++ ++  +F  + +
Sbjct: 253 DRPSFAEIHQAFETMFQ 269

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME +  S  +LF Y  K  R        L  Q++S +++ HR  +VHRD+KP+N L+ 
Sbjct: 88  MVMEYV--SGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 102 VRENFNTVYLVDFGLA 117
              N     + DFGL+
Sbjct: 146 AHMNAK---IADFGLS 158

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 20/167 (11%)
Query: 39  GDYNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
           G Y  +V EL   G  L+ + +   K FS +    +   +   +E++H + +VHRD+KP 
Sbjct: 88  GKYVYVVTELXKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPS 145
Query: 97  NFLMGVRENFN--TVYLVDFGLAVDFCPNCPPRIRTR-GLTGTARY-ASVNAHQWLDQSP 152
           N L  V E+ N  ++ + DFG A         ++R   GL  T  Y A+  A + L++  
Sbjct: 146 NILY-VDESGNPESIRICDFGFA--------KQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 153 RD---DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT 196
            D   D+ +L   L   L G  P+ +   D  E  + R+   K +++
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLS 243

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 111 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 166
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 167 EDCE-LKILDFGLA 179

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 101 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 156
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 157 EDCE-LKILDFGLA 169

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 114 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 169
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 170 EDCE-LKILDFGLA 182

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 111 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 166
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 167 EDCE-LKILDFGLA 179

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 102 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 157
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 158 EDCE-LKILDFGLA 170

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 54  EDLFQYCSKR----FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTV 109
           +DL  Y  K        +T+  L  Q +  L+ +H   IVHRD+KP+N L+    +  TV
Sbjct: 103 QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTV 159
Query: 110 YLVDFGLA 117
            L DFGLA
Sbjct: 160 KLADFGLA 167

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME +  S  +LF Y  K  R        L  Q++S +++ HR  +VHRD+KP+N L+ 
Sbjct: 88  MVMEYV--SGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 102 VRENFNTVYLVDFGLA 117
              N     + DFGL+
Sbjct: 146 AHMNAK---IADFGLS 158

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 127 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 182
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 183 EDCE-LKILDFGLA 195

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 54  EDLFQYCSKR----FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTV 109
           +DL  Y  K        +T+  L  Q +  L+ +H   IVHRD+KP+N L+    +  TV
Sbjct: 95  QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTV 151
Query: 110 YLVDFGLA 117
            L DFGLA
Sbjct: 152 KLADFGLA 159

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 123 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 178
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 179 EDCE-LKILDFGLA 191

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 33  MGYGTSGDYNILVMELLGPS--LEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH 90
           + YG       LVME L PS  L D  Q    R     +L+ + Q+   +E++  ++ VH
Sbjct: 80  VSYGPGRQSLRLVMEYL-PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 138
Query: 91  RDIKPDNFLMGVRENFNTVYLVDFGLA 117
           RD+   N L+   E+   V + DFGLA
Sbjct: 139 RDLAARNILV---ESEAHVKIADFGLA 162

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 111 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 166
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 167 EDCE-LKILDFGLA 179

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 100 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 155
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 156 EDCE-LKILDFGLA 168

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 33  MGYGTSGDYNILVMELLGPS--LEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH 90
           + YG       LVME L PS  L D  Q    R     +L+ + Q+   +E++  ++ VH
Sbjct: 92  VSYGPGRQSLRLVMEYL-PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150
Query: 91  RDIKPDNFLMGVRENFNTVYLVDFGLA 117
           RD+   N L+   E+   V + DFGLA
Sbjct: 151 RDLAARNILV---ESEAHVKIADFGLA 174

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 106 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 161
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 162 EDCE-LKILDFGLA 174

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 123 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 178
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 179 EDCE-LKILDFGLA 191

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 27  PGVPHVMGYGTSGDYNILVMELLG-PSLEDLFQYCSKRFSLKTVLM-LADQMISRLEHVH 84
           P +  ++G  T      +++E +   +L D  + C+++     VL+ +A Q+ S +E++ 
Sbjct: 70  PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           +K  +HRD+   N L+G  EN + V + DFGL+         R+ T G T TA   +   
Sbjct: 130 KKNFIHRDLAARNCLVG--EN-HLVKVADFGLS---------RLMT-GDTXTAHAGAKFP 176
Query: 145 HQWLDQ--------SPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTM 195
            +W           S + D+ A    L      G  P+  I        +++   M+   
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 235
Query: 196 TPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
                 EG P +  E +R C     S+ P++ ++  +F  + +
Sbjct: 236 ------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 109 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 164
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 165 EDCE-LKILDFGLA 177

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 101 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 156
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 157 EDCE-LKILDFGLA 169

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 103 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 158
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 159 EDCE-LKILDFGLA 171

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 27  PGVPHVMGYGTSGDYNILVMELLG-PSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVH 84
           P +  ++G  T      +++E +   +L D  + C+++  S   +L +A Q+ S +E++ 
Sbjct: 69  PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128
Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
           +K  +HRD+   N L+G  EN + V + DFGL+         R+ T G T TA   +   
Sbjct: 129 KKNFIHRDLAARNCLVG--EN-HLVKVADFGLS---------RLMT-GDTYTAHAGAKFP 175
Query: 145 HQWLDQ--------SPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTM 195
            +W           S + D+ A    L      G  P+  I        +++   M+   
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP- 234
Query: 196 TPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
                 EG P +  E +R C     S+ P++ ++  +F  + +
Sbjct: 235 ------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 124 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 179
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 180 EDCE-LKILDFGLA 192

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 116 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 171
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 172 EDCE-LKILDFGLA 184

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 115 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 170
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 171 EDCE-LKILDFGLA 183

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 116 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 171
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 172 EDCE-LKILDFGLA 184

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 106 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 161
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 162 EDCE-LKILDFGLA 174

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 100 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 155
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 156 EDCE-LKILDFGLA 168

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 54  EDLFQYCSKR----FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTV 109
           +DL  Y  K        +T+  L  Q +  L+ +H   IVHRD+KP+N L+    +  TV
Sbjct: 95  QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTV 151
Query: 110 YLVDFGLA 117
            L DFGLA
Sbjct: 152 KLADFGLA 159

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 111 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 166
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 167 EDCE-LKILDFGLA 179

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 116 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 171
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 172 EDCE-LKILDFGLA 184

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 110 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 165
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 166 EDCE-LKILDFGLA 178

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 124 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 179
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 180 EDCE-LKILDFGLA 192

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 33  MGYGTSGDYNILVMELLGPS--LEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH 90
           + YG       LVME L PS  L D  Q    R     +L+ + Q+   +E++  ++ VH
Sbjct: 79  VSYGPGRQSLRLVMEYL-PSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 137
Query: 91  RDIKPDNFLMGVRENFNTVYLVDFGLA 117
           RD+   N L+   E+   V + DFGLA
Sbjct: 138 RDLAARNILV---ESEAHVKIADFGLA 161

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 106 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 161
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 162 EDCE-LKILDFGLA 174

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 100 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 155
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 156 EDCE-LKILDFGLA 168

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 7/68 (10%)
Query: 54  EDLFQYCSKR----FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTV 109
           +DL  Y  K        +T+  L  Q +  L+ +H   IVHRD+KP+N L+    +  TV
Sbjct: 95  QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTV 151
Query: 110 YLVDFGLA 117
            L DFGLA
Sbjct: 152 KLADFGLA 159

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 127 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 182
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 183 EDCE-LKILDFGLA 195

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 110 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 165
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 166 EDCE-LKILDFGLA 178

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 104 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 159
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 160 EDCE-LKILDFGLA 172

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 22/147 (14%)
Query: 32  VMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR 91
           VM Y   GD   L+ +      ED+      RF +        +M+  ++ +H+   VHR
Sbjct: 152 VMDYYVGGDLLTLLSKFEDKLPEDM-----ARFYIG-------EMVLAIDSIHQLHYVHR 199
Query: 92  DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ- 150
           DIKPDN L+ V  +   + L DFG  +    N    +++    GT  Y S    Q ++  
Sbjct: 200 DIKPDNVLLDVNGH---IRLADFGSCLKM--NDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 151 ----SPRDDLEALCYTLVYFLRGKLPW 173
                P  D  +L   +   L G+ P+
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPF 281

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 109 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 164
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 165 EDCE-LKILDFGLA 177

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ + C K  +   V  L  Q++  L+++H   I+HRD+KP N  + V 
Sbjct: 124 LVTHLMGADLNNIVK-CQK-LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVN 179
Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 180 EDCE-LKILDFGLA 192

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	257
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-127
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-127
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-126
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-124
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-118
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-111
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-111
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-19
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-18
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-18
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-18
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-16
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-16
3ork_A	311	Serine/threonine protein kinase; structural genomi	6e-16
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-15
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-15
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-15
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-15
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-15
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-14
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	6e-14
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-14
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-13
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-13
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-13
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-13
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-13
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-13
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-13
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-13
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-13
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-13
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-13
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-13
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	7e-13
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	8e-13
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-13
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	9e-13
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-12
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-12
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-12
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-12
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-12
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-12
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-12
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-12
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-12
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-12
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-12
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-12
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-12
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-12
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-11
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-11
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-11
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-11
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-11
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-11
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	4e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-11
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-11
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	5e-11
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-11
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-11
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	8e-11
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-11
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-10
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-10
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-10
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-10
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-10
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	3e-10
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-10
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-10
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-10
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-10
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-10
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-10
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-10
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	6e-10
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-10
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	7e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	8e-10
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	9e-10
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-10
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-09
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-09
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-09
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-09
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-09
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-09
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-09
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-09
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-09
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	3e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	3e-09
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-09
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-09
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-09
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-09
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-09
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-09
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	7e-09
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-09
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	7e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	9e-09
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	9e-09
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-08
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-08
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-08
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-08
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-08
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-08
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-08
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	4e-08
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-08
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-08
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	5e-08
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-08
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	9e-08
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-07
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-07
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-07
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-07
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-07
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-07
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	4e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	4e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-07
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-07
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	7e-07
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-07
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	8e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	9e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-06
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	7e-06
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-05
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	3e-05
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-05
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-05
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	9e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-04
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-04
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	6e-04

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score =  364 bits (936), Expect = e-127
 Identities = 117/263 (44%), Positives = 166/263 (63%), Gaps = 8/263 (3%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+EP+++   +L  E  FY++L    G+P V  +G  G YN +V+ELLGPSLEDLF  C
Sbjct: 39  IKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLC 98

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV--RENFNTVYLVDFGLAV 118
            + FSLKTVLM+A Q+ISR+E+VH K +++RD+KP+NFL+G    +    ++++DF LA 
Sbjct: 99  DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158

Query: 119 DFC-PNCPPRIRTR---GLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
           ++  P     I  R    LTGTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218

Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+D  + R Q++ + K     E +CE   PE A +LRY R L F E+P+Y  LR  F 
Sbjct: 219 GLKADTLKERYQKIGDTKRATPIEVLCEN-FPEMATYLRYVRRLDFFEKPDYDYLRKLFT 277

Query: 235 NLLENKERCEFDLRYDWTLLERK 257
           +L + ++   FD  YDW   +  
Sbjct: 278 DLFD-RKGYMFDYEYDWIGKQLP 299

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score =  360 bits (927), Expect = e-127
 Identities = 123/259 (47%), Positives = 175/259 (67%), Gaps = 5/259 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L  E   Y+ + G  G+P +   G  GDYN++VMELLGPSLEDLF +C
Sbjct: 39  IKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFC 98

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++FSLKTVL+LADQMISR+E++H K  +HRD+KPDNFLMG+ +  N VY++DFGLA  +
Sbjct: 99  SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158

Query: 121 CPN----CPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YF  G LPWQ +
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  +  + +R++E K++   E +C+G P EFA +L +CR L F ++P+Y  LR  FRNL
Sbjct: 219 KAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278

Query: 237 LENKERCEFDLRYDWTLLE 255
              ++   +D  +DW +L+
Sbjct: 279 FH-RQGFSYDYVFDWNMLK 296

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score =  360 bits (925), Expect = e-126
 Identities = 110/260 (42%), Positives = 159/260 (61%), Gaps = 7/260 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K EP R+   +L  E   Y+ L G  G+P+V  +G  G +N+LV++LLGPSLEDL   C
Sbjct: 40  IKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLC 99

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR--ENFNTVYLVDFGLAV 118
            ++FS+KTV M A QM++R++ +H K +V+RDIKPDNFL+G    +N N +Y+VDFG+  
Sbjct: 100 GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159

Query: 119 DFCPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
            +         P    + L+GTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 219

Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+   + + +R+ E K +     +C G P EF +++ Y R LAF   P+Y  L+  F 
Sbjct: 220 GLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279

Query: 235 NLLENKERCEFDLRYDWTLL 254
            +LE +     D  +DW LL
Sbjct: 280 KVLE-RLNTTEDENFDWNLL 298

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score =  360 bits (925), Expect = e-124
 Identities = 130/261 (49%), Positives = 179/261 (68%), Gaps = 5/261 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L +E   Y  L G  G+P+V  +G  GDYN+LVM+LLGPSLEDLF +C
Sbjct: 37  IKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++ SLKTVLMLADQMI+R+E VH K  +HRDIKPDNFLMG+    N VY++DFGLA  +
Sbjct: 97  SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156

Query: 121 CPNCP----PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYASVN H  ++QS RDDLE+L Y L+YFLRG LPWQ +
Sbjct: 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  ++ + ++++E K+  + EA+C G P EFA +  YCR L F ++P+Y  L+  FR+ 
Sbjct: 217 KAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRD- 275

Query: 237 LENKERCEFDLRYDWTLLERK 257
           L  +E  +FD  +DWT+L+ +
Sbjct: 276 LFIREGFQFDYVFDWTILKYQ 296

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score =  340 bits (875), Expect = e-118
 Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 31/283 (10%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAP--------------GVPHVMGYGT----SGDYN 42
           +KVEP  N    LF E  FY++                   GVP   G G        Y 
Sbjct: 70  VKVEPSDNG--PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR 127

Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
            ++M+  G  L+ +++  +KRFS KTVL L+ +++  LE++H  + VH DIK  N L+  
Sbjct: 128 FMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN- 186

Query: 103 RENFNTVYLVDFGLAVDFCPNC-----PPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            +N + VYLVD+GLA  +CP           + R   GT  + S++AH  +  S R DLE
Sbjct: 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPK-RCHDGTIEFTSIDAHNGVAPSRRGDLE 245

Query: 158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAIC---EGTPPEFAEFLRY 214
            L Y ++ +L G LPW+    D +  R  ++   +   +    C      P E A+++  
Sbjct: 246 ILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMET 305

Query: 215 CRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLLERK 257
            + L ++E+P Y  LRD     L+     + D + D +++E  
Sbjct: 306 VKLLDYTEKPLYENLRDILLQGLK-AIGSKDDGKLDLSVVENG 347

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score =  323 bits (829), Expect = e-111
 Identities = 81/279 (29%), Positives = 125/279 (44%), Gaps = 37/279 (13%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHG--------------APGVPHVMGYGTS----GDYN 42
           +KVE   N    LF E  FY+++                  G+P   G G +      Y 
Sbjct: 70  VKVEYQENG--PLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYR 127

Query: 43  ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
            +VME LG  L+ +       F   TVL L  +M+  LE++H  + VH DIK  N L+G 
Sbjct: 128 FMVMERLGIDLQKISGQN-GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLG- 185

Query: 103 RENFNTVYLVDFGLAVDFCPNC-----PPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            +N + VYL D+GL+  +CPN          R +G  GT  + S++AH+ +  S R D+E
Sbjct: 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPR-KGHNGTIEFTSLDAHKGVALSRRSDVE 244

Query: 158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQR---VTEMKLTMTPEAICEGTPPEFAEFLRY 214
            L Y ++ +L GKLPW+    D    +  +   + E+  ++   A    +  E A+FL  
Sbjct: 245 ILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVC 304

Query: 215 CRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTL 253
              LA+ E+PNY  L+                   D++ 
Sbjct: 305 AHSLAYDEKPNYQALKKILNPHGIPLG------PLDFST 337

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score =  322 bits (827), Expect = e-111
 Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 28/276 (10%)

Query: 1   MKVEPVRNPVQRLFWERNFYE------------KLHGAP--GVPHVMGYGTS-GDYNILV 45
           +K++        LF E+NF++            KL+  P   +P  MG+G     Y  LV
Sbjct: 80  LKLDAKDGR---LFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLV 136

Query: 46  MELLGPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRE 104
           +  LG SL+       K   S ++VL +A +++  LE +H  + VH ++  +N  +   E
Sbjct: 137 LPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD-PE 195

Query: 105 NFNTVYLVDFGLAVDFCPNC---PPRIRTR-GLTGTARYASVNAHQWLDQSPRDDLEALC 160
           + + V L  +G A  +CP+         +R    G   + S++ H+    S R DL++L 
Sbjct: 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLG 255

Query: 161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEG---TPPEFAEFLRYCRG 217
           Y ++ +L G LPW +   + E+   Q+   +         C           ++L+    
Sbjct: 256 YCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMA 315

Query: 218 LAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTL 253
           L + E+P Y  LR++   LL+   R          +
Sbjct: 316 LTYEEKPPYAMLRNNLEALLQ-DLRVSPYDPIGLPM 350

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 85.5 bits (211), Expect = 2e-19
 Identities = 30/222 (13%), Positives = 54/222 (24%), Gaps = 24/222 (10%)

Query: 7   RNPVQRLFWERNFYEKLHGA-PGVPHVMGYGTSGDYNI-----LVMELLGPSLEDLFQYC 60
            +P +     R        A    P         D        L+M      LE LF   
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181

Query: 61  SK------RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDF 114
                      +  + +L  Q+I    ++  K +VH    PDN  +        + L D 
Sbjct: 182 DFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGR---LMLGDV 238

Query: 115 GLAVDFCPNCPPRIRTRGLTGTARYAS--VNAHQWLDQSPRDDLEALCYTLVYFLRGKLP 172
                         R    +    YA            +   +   L  ++       LP
Sbjct: 239 SALW------KVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292

Query: 173 WQSIKSDNEET-RMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
           +  +    + + +   +            C   P      + 
Sbjct: 293 FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG 334

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 82.8 bits (205), Expect = 1e-18
 Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 34/189 (17%)

Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME       DL  +  K               M+  +  +H+  IVH D+KP NFL+ 
Sbjct: 86  MVMECGN---IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 141

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS-----------VNAHQWLDQ 150
           V      + L+DFG+A    P+    ++     GT  Y              N       
Sbjct: 142 VD---GMLKLIDFGIANQMQPDTTSVVKD-SQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197

Query: 151 SPRDDLEAL-C--YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-PEAICEGTPP 206
           SP+ D+ +L C  Y + Y   GK P+Q I   N+ +++  + +    +  P+        
Sbjct: 198 SPKSDVWSLGCILYYMTY---GKTPFQQI--INQISKLHAIIDPNHEIEFPDIP----EK 248

Query: 207 EFAEFLRYC 215
           +  + L+ C
Sbjct: 249 DLQDVLKCC 257

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 82.0 bits (203), Expect = 2e-18
 Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 34/189 (17%)

Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME       DL  +  K               M+  +  +H+  IVH D+KP NFL+ 
Sbjct: 105 MVMECGNI---DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS-----------VNAHQWLDQ 150
           V      + L+DFG+A    P+    ++     GT  Y              N       
Sbjct: 161 VD---GMLKLIDFGIANQMQPDTTSVVKD-SQVGTVNYMPPEAIKDMSSSRENGKSKSKI 216

Query: 151 SPRDDLEAL-C--YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-PEAICEGTPP 206
           SP+ D+ +L C  Y + Y   GK P+Q I   N+ +++  + +    +  P+        
Sbjct: 217 SPKSDVWSLGCILYYMTY---GKTPFQQI--INQISKLHAIIDPNHEIEFPDIP----EK 267

Query: 207 EFAEFLRYC 215
           +  + L+ C
Sbjct: 268 DLQDVLKCC 276

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 82.6 bits (204), Expect = 2e-18
 Identities = 49/212 (23%), Positives = 80/212 (37%), Gaps = 41/212 (19%)

Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME       DL  +  K               M+  +  +H+  IVH D+KP NFL+ 
Sbjct: 133 MVMECGN---IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS-----------VNAHQWLDQ 150
           V      + L+DFG+A    P+    ++     G   Y              N       
Sbjct: 189 VD---GMLKLIDFGIANQMQPDTTSVVKD-SQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244

Query: 151 SPRDDLEAL-C--YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-PEAICEGTPP 206
           SP+ D+ +L C  Y + Y   GK P+Q I   N+ +++  + +    +  P+        
Sbjct: 245 SPKSDVWSLGCILYYMTY---GKTPFQQI--INQISKLHAIIDPNHEIEFPDIP----EK 295

Query: 207 EFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
           +  + L+ C       +P   K R S   LL 
Sbjct: 296 DLQDVLKCC----LKRDP---KQRISIPELLA 320

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 77.0 bits (189), Expect = 2e-16
 Identities = 26/224 (11%), Positives = 56/224 (25%), Gaps = 42/224 (18%)

Query: 2   KVEPVRNPVQRLFWERNFYEKLHGA-PGVPHVM-GYGTSGDYNI----LVMELLGPSLED 55
            +  ++N  Q     R  +       P    ++       D  +     +   +  +L+ 
Sbjct: 129 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQT 188

Query: 56  LFQY------CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTV 109
             +         K       L L  Q+I  L  +H   +VH  ++P + ++  R     V
Sbjct: 189 FGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG---V 245

Query: 110 YLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS-------VNAHQWLDQSPRDDLEA---- 158
           +L  F   V               + +  +                D+            
Sbjct: 246 FLTGFEHLV-------RDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWA 298

Query: 159 ---LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA 199
              + Y +       LP      D      + +      +    
Sbjct: 299 LGLVIYWIWC---ADLPIT---KDAALGGSEWIFRSCKNIPQPV 336

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 75.3 bits (186), Expect = 4e-16
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 7/116 (6%)

Query: 27  PGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
             +  ++      D   LVME + GP+L +  +      S+ T +   +Q++  ++H H 
Sbjct: 71  QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDGIKHAHD 129

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
            +IVHRDIKP N L+    +  T+ + DFG+A     +     +T  + GT +Y S
Sbjct: 130 MRIVHRDIKPQNILID---SNKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFS 180

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 75.0 bits (185), Expect = 6e-16
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 36  GTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIK 94
             +G    +VME + G +L D+        + K  + +       L   H+  I+HRD+K
Sbjct: 85  TPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVK 143

Query: 95  PDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           P N ++      N V ++DFG+A     +     +T  + GTA+Y S
Sbjct: 144 PANIMIS---ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 30/113 (26%), Positives = 41/113 (36%), Gaps = 10/113 (8%)

Query: 30  PHVMGYGTS---GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK 86
           P  +    +   G    L  EL GPSL+   +          V       +  L H+H +
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176

Query: 87  KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
            +VH D+KP N  +G R       L DFGL V+               G  RY
Sbjct: 177 GLVHLDVKPANIFLGPR---GRCKLGDFGLLVELGTA----GAGEVQEGDPRY 222

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 74.3 bits (182), Expect = 2e-15
 Identities = 30/229 (13%), Positives = 57/229 (24%), Gaps = 34/229 (14%)

Query: 2   KVEPVRNPVQRLFWERNFYEKLHGA-PGVPHV-MGYGTSGDYNI----LVMELLGPSLED 55
            +  ++N  Q     R  +       P    +        D  +     +   +  +L+ 
Sbjct: 134 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQT 193

Query: 56  LFQYC------SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTV 109
             +         K       L L  Q+I  L  +H   +VH  ++P + ++  R     V
Sbjct: 194 FGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGG---V 250

Query: 110 YLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS-----VNAHQWLDQSPRDDLEALCYTLV 164
           +L  F   V                      +        H     +   D   L   + 
Sbjct: 251 FLTGFEHLVR--DGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308

Query: 165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
           +     LP      D      + +            C+  P      L 
Sbjct: 309 WIWCADLPNT---DDAALGGSEWIFRS---------CKNIPQPVRALLE 345

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 27  PGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           P V  +  +G       + M L+ G  L  + +      +    + +  Q+ S L+  H 
Sbjct: 94  PHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR-QGPLAPPRAVAIVRQIGSALDAAHA 152

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
               HRD+KP+N L+   +     YLVDFG+A           +     GT  Y +
Sbjct: 153 AGATHRDVKPENILVSADDF---AYLVDFGIASAT--TDEKLTQLGNTVGTLYYMA 203

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 73.3 bits (180), Expect = 4e-15
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 2/98 (2%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           + +EL   +L++  +           + L  Q  S L H+H   IVHRD+KP N L+ + 
Sbjct: 95  IAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154

Query: 104 ENFNT--VYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
                    + DFGL            R  G+ GT  +
Sbjct: 155 NAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 72.1 bits (177), Expect = 6e-15
 Identities = 46/246 (18%), Positives = 85/246 (34%), Gaps = 40/246 (16%)

Query: 38  SGDYNILVMELL--GPSLEDLFQYCSKR-----FSLKTVLMLADQMISRLEHVHRKKIVH 90
           +  + +L+ME    G     L+    +            L++   ++  + H+    IVH
Sbjct: 80  TTRHKVLIMEFCPCG----SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135

Query: 91  RDIKPDNFLMGVRENFNTVY-LVDFGLAVDFCPNCPPRIRTRGLTGTARYAS----VNAH 145
           R+IKP N +  + E+  +VY L DFG A +   +      +  L GT  Y        A 
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVS--LYGTEEYLHPDMYERAV 191

Query: 146 QWLDQSPRDDLEA-------LCYTLVYFLRGKLPWQSIKS-DNEETRMQRVTEMKLTMTP 197
              D   +              Y       G LP++  +     +  M ++   K +   
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAAT---GSLPFRPFEGPRRNKEVMYKIITGKPSGAI 248

Query: 198 EAI--CEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN--KERCEFD--LRYDW 251
             +   E  P +++  +     L+   +     L     N+LE   ++   FD       
Sbjct: 249 SGVQKAENGPIDWSGDMPVSCSLSRGLQV---LLTPVLANILEADQEKCWGFDQFFAETS 305

Query: 252 TLLERK 257
            +L R 
Sbjct: 306 DILHRG 311

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 70.7 bits (173), Expect = 4e-14
 Identities = 20/127 (15%), Positives = 47/127 (37%), Gaps = 32/127 (25%)

Query: 27  PGVPHVMGYGTSGDYNI-----LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRL 80
           P +  +  +    D +      +VME + G SL+       ++  +   +    +++  L
Sbjct: 139 PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---QKLPVAEAIAYLLEILPAL 195

Query: 81  EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT------ 134
            ++H   +V+ D+KP+N ++        + L+D G                 +       
Sbjct: 196 SYLHSIGLVYNDLKPENIMLTE----EQLKLIDLGAV-------------SRINSFGYLY 238

Query: 135 GTARYAS 141
           GT  + +
Sbjct: 239 GTPGFQA 245

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 69.9 bits (171), Expect = 6e-14
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 12/88 (13%)

Query: 38  SGDYNILVMELL--GPSLEDLFQYCSKR-----FSLKTVLMLADQMISRLEHVHRKKIVH 90
           +  + +L+ME    G     L+    +            L++   ++  + H+    IVH
Sbjct: 80  TTRHKVLIMEFCPCG----SLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135

Query: 91  RDIKPDNFLMGVRENFNTVY-LVDFGLA 117
           R+IKP N +  + E+  +VY L DFG A
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAA 163

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 69.2 bits (170), Expect = 6e-14
 Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 17/126 (13%)

Query: 23  LHGAPGVPHVMG-YGT--SGDYNILVMELL--GPSLEDLFQYCSKR----FSLKTVLMLA 73
           L  A   P V+  +    +    IL++E    G    ++F  C        S   V+ L 
Sbjct: 82  LELAKSCPRVINLHEVYENTSEIILILEYAAGG----EIFSLCLPELAEMVSENDVIRLI 137

Query: 74  DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGL 133
            Q++  + ++H+  IVH D+KP N L+        + +VDFG++      C      R +
Sbjct: 138 KQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC----ELREI 193

Query: 134 TGTARY 139
            GT  Y
Sbjct: 194 MGTPEY 199

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 12/102 (11%)

Query: 44  LVMELL--GPSLEDLFQY--CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           +V+EL+  G    +LF     +KR    T  +   QM+  ++++H   I+HRD+KP+N L
Sbjct: 216 IVLELMEGG----ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 271

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +  +E    + + DFG +             R L GT  Y +
Sbjct: 272 LSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLA 309

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 68.5 bits (168), Expect = 1e-13
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 10/102 (9%)

Query: 22  KLHGAPGVPHVMG----YGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVL--MLADQ 75
           K+    G P V+     + T   + +LV+E   P+ +DLF Y +++  L          Q
Sbjct: 90  KVGAGGGHPGVIRLLDWFETQEGF-MLVLERPLPA-QDLFDYITEKGPLGEGPSRCFFGQ 147

Query: 76  MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +++ ++H H + +VHRDIK +N L  +        L+DFG  
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENIL--IDLRRGCAKLIDFGSG 187

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 12/102 (11%)

Query: 44  LVMELL--GPSLEDLFQY-CSK-RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           +V+EL+  G    +LF       R    T  +   QM+  ++++H   I+HRD+KP+N L
Sbjct: 91  IVLELMEGG----ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVL 146

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +  +E    + + DFG +             R L GT  Y +
Sbjct: 147 LSSQEEDCLIKITDFGHSKILGETSL----MRTLCGTPTYLA 184

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 67.9 bits (166), Expect = 3e-13
 Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 17/113 (15%)

Query: 44  LVMELLGPSLEDL------FQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           + +EL   +L+DL           K       + L  Q+ S + H+H  KI+HRD+KP N
Sbjct: 86  IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN 145

Query: 98  FLMGVRENFNTVY----------LVDFGLAVDFCPN-CPPRIRTRGLTGTARY 139
            L+     F              + DFGL           R      +GT+ +
Sbjct: 146 ILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGW 198

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 68.2 bits (166), Expect = 3e-13
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 29  VPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKR-----FSLKTVLMLADQMISRLEHV 83
           VP  +      D  +L ME       DL +Y ++           +  L   + S L ++
Sbjct: 80  VPDGLQKLAPNDLPLLAMEYC--EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137

Query: 84  HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
           H  +I+HRD+KP+N ++          ++D G A +    
Sbjct: 138 HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 177

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 12/100 (12%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LVME    G    +LF     R  F+     ++  Q++S + ++H+  IVHRD+KP+N L
Sbjct: 113 LVMECYKGG----ELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLL 168

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +  +E    + +VDFGL+  F        + +   GTA Y
Sbjct: 169 LESKEKDALIKIVDFGLSAVFENQK----KMKERLGTAYY 204

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 12/100 (12%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           +V EL   G    +LF    KR  FS      +  Q+ S + ++H+  IVHRD+KP+N L
Sbjct: 98  IVGELYTGG----ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENIL 153

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +  +E    + ++DFGL+  F  N     + +   GTA Y
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYY 189

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 67.3 bits (164), Expect = 4e-13
 Identities = 35/160 (21%), Positives = 58/160 (36%), Gaps = 25/160 (15%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLH------GAPGVPHVMGYGTSGDYNILVMELL-GPSL 53
           +KV+   NP     WE     +L                      + ++LV EL    +L
Sbjct: 100 LKVQKPANP-----WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTL 154

Query: 54  EDLFQ----YCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR------ 103
            +          K      V+  A +M+  +E VH  +I+H DIKPDNF++G        
Sbjct: 155 LNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD 214

Query: 104 --ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
             +    + L+D G ++D     P          T+ +  
Sbjct: 215 EDDLSAGLALIDLGQSIDM-KLFPKGTIFTAKCETSGFQC 253

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 66.6 bits (163), Expect = 5e-13
 Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 29/166 (17%)

Query: 30  PHVMGY------GTSGDYNI-LVMEL-LGPSLEDLFQYCSK---RFSLKTVLMLADQMIS 78
           P+++             +   L++      +L +  +         +   +L L   +  
Sbjct: 86  PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145

Query: 79  RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGL----- 133
            LE +H K   HRD+KP N L+G         L+D G     C +     +   L     
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDE---GQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202

Query: 134 -TGTARYAS---VNAHQWLDQSPRDDLEAL---CYTLVYFLRGKLP 172
              T  Y +    +         R D+ +L    Y +++   G+ P
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF---GEGP 245

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 66.5 bits (163), Expect = 5e-13
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 13/102 (12%)

Query: 43  ILVMELL--GPSLEDLFQYCSKRFSL--KTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           +L++EL+  G    +LF + +++ SL  +       Q++  + ++H KKI H D+KP+N 
Sbjct: 91  VLILELVSGG----ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENI 146

Query: 99  LMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           ++  +      + L+DFGLA +           + + GT  +
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVE----FKNIFGTPEF 184

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 67.0 bits (164), Expect = 5e-13
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 12/100 (12%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV E+   G    +LF     R  FS      +  Q++S + ++H+ KIVHRD+KP+N L
Sbjct: 103 LVGEVYTGG----ELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLL 158

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +  +     + ++DFGL+  F  +       +   GTA Y
Sbjct: 159 LESKSKDANIRIIDFGLSTHFEASKK----MKDKIGTAYY 194

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 66.2 bits (162), Expect = 7e-13
 Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 10/96 (10%)

Query: 28  GVPHVMG----YGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVL--MLADQMISRLE 81
           G   V+     +     + +L++E   P  +DLF + ++R +L+  L      Q++  + 
Sbjct: 106 GFSGVIRLLDWFERPDSF-VLILERPEPV-QDLFDFITERGALQEELARSFFWQVLEAVR 163

Query: 82  HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           H H   ++HRDIK +N L  +  N   + L+DFG  
Sbjct: 164 HCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSG 197

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 66.2 bits (162), Expect = 7e-13
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 15/104 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSKRFSLKTVLMLAD------QMISRLEHVHRKKIVHRDIKP 95
           +V E +       DL     KR     V   A       Q++  L + H   I+HRD+KP
Sbjct: 103 MVFEFMDGA----DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKP 158

Query: 96  DNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
              L+  +EN   V L  FG+A+         +   G  GT  +
Sbjct: 159 HCVLLASKENSAPVKLGGFGVAIQL---GESGLVAGGRVGTPHF 199

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 65.7 bits (161), Expect = 8e-13
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 12/100 (12%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           +V EL   G    +LF    KR  FS      +  Q+ S + ++H+  IVHRD+KP+N L
Sbjct: 98  IVGELYTGG----ELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENIL 153

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +  +E    + ++DFGL+  F  N     + +   GTA Y
Sbjct: 154 LESKEKDCDIKIIDFGLSTCFQQN----TKMKDRIGTAYY 189

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 65.3 bits (160), Expect = 8e-13
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 12/102 (11%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LVMEL   G    +LF+    +  F       +   ++S + + H+  + HRD+KP+NFL
Sbjct: 83  LVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFL 138

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
                  + + L+DFGLA  F P        R   GT  Y S
Sbjct: 139 FLTDSPDSPLKLIDFGLAARFKPG----KMMRTKVGTPYYVS 176

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 66.4 bits (162), Expect = 9e-13
 Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 27/173 (15%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            +++L+  G    DL  + S+   FS   +   A ++I  LEH+H + +V+RD+KP N L
Sbjct: 269 FILDLMNGG----DLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANIL 324

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS---VNAHQWLDQSPRDDL 156
           +    +   V + D GLA DF      + +     GT  Y +   +      D S   D 
Sbjct: 325 LDEHGH---VRISDLGLACDF-----SKKKPHASVGTHGYMAPEVLQKGVAYDSSA--DW 374

Query: 157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT----MTPEA--ICEG 203
            +L   L   LRG  P++  K+ ++    +    M +      +PE   + EG
Sbjct: 375 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEG 427

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 65.9 bits (161), Expect = 1e-12
 Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 44  LVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +  ELL  +L +L +    + FSL  V   A  ++  L+ +H+ +I+H D+KP+N L+  
Sbjct: 176 MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILL-K 234

Query: 103 RENFNTVYLVDFGLA 117
           ++  + + ++DFG +
Sbjct: 235 QQGRSGIKVIDFGSS 249

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 13/102 (12%)

Query: 43  ILVMELL--GPSLEDLFQYCSKRFSL--KTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           +L++EL+  G    +LF + +++ SL  +       Q++  + ++H KKI H D+KP+N 
Sbjct: 91  VLILELVSGG----ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENI 146

Query: 99  LMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           ++  +      + L+DFGLA +           + + GT  +
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVE----FKNIFGTPEF 184

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 14/104 (13%)

Query: 43  ILVMELL--GPSLEDLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           +++ E +       D+F+  +      + + ++    Q+   L+ +H   I H DI+P+N
Sbjct: 77  VMIFEFISGL----DIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN 132

Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
            +   R + +T+ +++FG A    P        R L     Y +
Sbjct: 133 IIYQTRRS-STIKIIEFGQARQLKPGD----NFRLLFTAPEYYA 171

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 64.9 bits (159), Expect = 1e-12
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 12/102 (11%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV +L+  G    +LF+    R  +S         Q++  + + H   IVHR++KP+N L
Sbjct: 82  LVFDLVTGG----ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLL 137

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +  +     V L DFGLA++   +        G  GT  Y S
Sbjct: 138 LASKAKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLS 175

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 66.0 bits (161), Expect = 2e-12
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 14/109 (12%)

Query: 38  SGDYNILVMELL--GPSLEDLFQYC-SKRFSL--KTVLMLADQMISRLEHVHRKKIVHRD 92
             +  +++ E +  G    +LF+    +   +     +    Q+   L H+H    VH D
Sbjct: 225 DDNEMVMIYEFMSGG----ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLD 280

Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +KP+N +   + + N + L+DFGL     P        +  TGTA +A+
Sbjct: 281 LKPENIMFTTKRS-NELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAA 324

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 16/106 (15%)

Query: 44  LVMELL--GPSLEDLF------QYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKP 95
           +VME    G    +L       Q   K  S   V  L  QM++ L + H + +VH+D+KP
Sbjct: 97  IVMETCEGG----ELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKP 152

Query: 96  DNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +N L       + + ++DFGLA  F  +      +    GTA Y +
Sbjct: 153 ENILFQDTSPHSPIKIIDFGLAELFKSD----EHSTNAAGTALYMA 194

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 65.2 bits (159), Expect = 2e-12
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-PRIRTRGL 133
           Q+ S L ++H + I HRDIKP+NFL    ++F  + LVDFGL+ +F              
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFE-IKLVDFGLSKEFYKLNNGEYYGMTTK 234

Query: 134 TGTARYAS 141
            GT  + +
Sbjct: 235 AGTPYFVA 242

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 14/109 (12%)

Query: 38  SGDYNILVMELL--GPSLEDLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRD 92
                +L++E L  G    +LF   +      S   V+    Q    L+H+H   IVH D
Sbjct: 119 DKYEMVLILEFLSGG----ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLD 174

Query: 93  IKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           IKP+N +   ++  ++V ++DFGLA    P+   ++     T TA +A+
Sbjct: 175 IKPENIMCETKKA-SSVKIIDFGLATKLNPDEIVKV----TTATAEFAA 218

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 45/226 (19%)

Query: 33  MGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR 91
           MG   S  +  ++  L  G +L  + +       +     +A +++  + ++H K I+H+
Sbjct: 95  MGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHK 154

Query: 92  DIKPDNFLMGVRENFNTVYLVDFGLA--VDFCPNCPPRIRTRGLTGTARYASVNAHQWL- 148
           D+K  N      +N   V + DFGL              + R   G            L 
Sbjct: 155 DLKSKNVFY---DN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLC--------HLA 202

Query: 149 -----DQSPRDDLEALCYTL---VY--------FLRGKLPWQSIKSDNEETRMQRVTEMK 192
                  SP  + + L ++    V+            + P+++            + +M 
Sbjct: 203 PEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ------PAEAIIWQMG 256

Query: 193 LTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
             M P     G   E ++ L +C    ++ E      R +F  L++
Sbjct: 257 TGMKPNLSQIGMGKEISDILLFC----WAFEQE---ERPTFTKLMD 295

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 64.6 bits (158), Expect = 2e-12
 Identities = 50/224 (22%), Positives = 88/224 (39%), Gaps = 46/224 (20%)

Query: 33  MGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR 91
           MGY T+    I V +   G SL         +F +K ++ +A Q    ++++H K I+HR
Sbjct: 86  MGYSTAPQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHR 144

Query: 92  DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS 151
           D+K +N  +   E+ NTV + DFGLA           ++R            +  W+  +
Sbjct: 145 DLKSNNIFLH--ED-NTVKIGDFGLA---------TEKSRWSGSHQFEQLSGSILWM--A 190

Query: 152 PRDDLEALCYTL---------VY-F-------LRGKLPWQSIKSDNEETRMQRVTEMKLT 194
           P    E +             VY F       + G+LP+ +I  +N +  ++ V    L+
Sbjct: 191 P----EVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQIIEMVGRGSLS 244

Query: 195 MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
                +    P      +  C      ++ +    R SF  +L 
Sbjct: 245 PDLSKVRSNCPKRMKRLMAEC----LKKKRD---ERPSFPRILA 281

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 29/135 (21%), Positives = 45/135 (33%), Gaps = 15/135 (11%)

Query: 19  FYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMI 77
           +Y            M          + ME     +L DL    +          L  Q++
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126

Query: 78  SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT--- 134
             L ++H + I+HRD+KP N  +    N   V + DFGLA +   +              
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDESRN---VKIGDFGLAKNVHRSLDILKLDSQNLPGS 183

Query: 135 --------GTARYAS 141
                   GTA Y +
Sbjct: 184 SDNLTSAIGTAMYVA 198

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 12/100 (12%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV E    G    +LF+    R  F       +  Q++S + ++H+  IVHRDIKP+N L
Sbjct: 123 LVTEFYEGG----ELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENIL 178

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +  + +   + +VDFGL+  F  +     + R   GTA Y
Sbjct: 179 LENKNSLLNIKIVDFGLSSFFSKD----YKLRDRLGTAYY 214

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 64.6 bits (158), Expect = 3e-12
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 12/102 (11%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV +L+  G    +LF+    R  +S         Q++  + + H   IVHR++KP+N L
Sbjct: 105 LVFDLVTGG----ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLL 160

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +  +     V L DFGLA++   +        G  GT  Y S
Sbjct: 161 LASKAKGAAVKLADFGLAIEVNDSEA----WHGFAGTPGYLS 198

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 64.1 bits (157), Expect = 3e-12
 Identities = 22/102 (21%), Positives = 49/102 (48%), Gaps = 13/102 (12%)

Query: 43  ILVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           +L++EL+  G    +LF + +++   +         Q++  + ++H K+I H D+KP+N 
Sbjct: 84  VLILELVSGG----ELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENI 139

Query: 99  LMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           ++  +      + L+DFG+A             + + GT  +
Sbjct: 140 MLLDKNVPNPRIKLIDFGIAHKIEAGNE----FKNIFGTPEF 177

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 13/102 (12%)

Query: 43  ILVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           IL++EL+  G    +LF + +++   + +       Q+++ + ++H  +I H D+KP+N 
Sbjct: 90  ILILELVAGG----ELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENI 145

Query: 99  LMGVRENFN-TVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           ++  R      + ++DFGLA             + + GT  +
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEF 183

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 63.4 bits (155), Expect = 5e-12
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 32  VMGYGTSGDYNILVMELLGPSLEDLFQY-CSKRFSLKTVLMLADQMISRLEHVHRKKIVH 90
           V+          +VME     ++++      KRF +        Q+I  LE++H + IVH
Sbjct: 74  VLYNEEKQKM-YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVH 132

Query: 91  RDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +DIKP N L+        + +   G+A
Sbjct: 133 KDIKPGNLLLTTGGT---LKISALGVA 156

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 63.9 bits (156), Expect = 5e-12
 Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 14/102 (13%)

Query: 43  ILVMELL--GPSLEDLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           +LVME +  G    +LF          +    ++   Q+   + H+H+  I+H D+KP+N
Sbjct: 162 VLVMEYVDGG----ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPEN 217

Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
            L   R+    + ++DFGLA  + P        +   GT  +
Sbjct: 218 ILCVNRDA-KQIKIIDFGLARRYKPREK----LKVNFGTPEF 254

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 63.0 bits (154), Expect = 6e-12
 Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 33/169 (19%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           L++E    G    +L++   K  RF  +      +++   L + H +K++HRDIKP+N L
Sbjct: 91  LMLEFAPRG----ELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLL 146

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS--VNAHQWLDQSPRDDLE 157
           MG +     + + DFG +V       P +R R + GT  Y    +   +  D   + DL 
Sbjct: 147 MGYKGE---LKIADFGWSVH-----APSLRRRTMCGTLDYLPPEMIEGKTHD--EKVDLW 196

Query: 158 A---LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT----MTPEA 199
               LCY     L G  P+    S +     +R+  + L     ++  +
Sbjct: 197 CAGVLCYEF---LVGMPPFD---SPSHTETHRRIVNVDLKFPPFLSDGS 239

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 63.0 bits (153), Expect = 1e-11
 Identities = 29/141 (20%), Positives = 46/141 (32%), Gaps = 18/141 (12%)

Query: 14  FWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC--SKRFSLKTVL 70
             +    +       V  +          I  M+L    +L+D        +       L
Sbjct: 109 SVKIRRMDPFSTKNTVGQLQPSSPKVYLYI-QMQLCRKENLKDWMNRRCSLEDREHGVCL 167

Query: 71  MLADQMISRLEHVHRKKIVHRDIKPDN-FLMGVRENFNTVYLVDFGLA------VDFCPN 123
            +  Q+   +E +H K ++HRD+KP N F        + V + DFGL        +    
Sbjct: 168 HIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT----MDDVVKVGDFGLVTAMDQDEEEQTV 223

Query: 124 CPPRIRTRGLT---GTARYAS 141
             P       T   GT  Y S
Sbjct: 224 LTPMPAYATHTGQVGTKLYMS 244

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 11/100 (11%)

Query: 30  PHVMG----YGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVL--MLADQMISRLEHV 83
            +++     +   G +  LVME  G  L+ LF +  +   L   L   +  Q++S + ++
Sbjct: 89  ANIIKVLDIFENQGFF-QLVMEKHGSGLD-LFAFIDRHPRLDEPLASYIFRQLVSAVGYL 146

Query: 84  HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
             K I+HRDIK +N ++   E+F  + L+DFG A      
Sbjct: 147 RLKDIIHRDIKDENIVIA--EDFT-IKLIDFGSAAYLERG 183

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 11/102 (10%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LVMELL  G    +LF+   K+  FS      +  +++S + H+H   +VHRD+KP+N L
Sbjct: 83  LVMELLNGG----ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLL 138

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
                +   + ++DFG A    P+  P    +    T  YA+
Sbjct: 139 FTDENDNLEIKIIDFGFARLKPPDNQP---LKTPCFTLHYAA 177

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 19  FYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKR----FSLKTVLMLAD 74
           +    +             +    I  ME        L Q+  KR          L L +
Sbjct: 73  WDGFDYDPETSSKNSSRSKTKCLFI-QMEFC--DKGTLEQWIEKRRGEKLDKVLALELFE 129

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           Q+   ++++H KK+++RD+KP N  +        V + DFGL 
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDT---KQVKIGDFGLV 169

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 6/100 (6%)

Query: 44  LVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME L  G     +     + F+ +    +   +   ++++H   I HRD+KP+N L  
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 195

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
            +     + L DFG A +   +    + T     T  Y +
Sbjct: 196 SKRPNAILKLTDFGFAKETTSH--NSLTTP--CYTPYYVA 231

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 25/159 (15%)

Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           L++E     L  +++   K  +F  +       ++ + L + H K+++HRDIKP+N L+G
Sbjct: 86  LILEYA--PLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG 143

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS--VNAHQWLDQSPRDDLEA- 158
                  + + DFG +V       P  R   L GT  Y    +   +  D   + DL + 
Sbjct: 144 SAGE---LKIADFGWSVH-----APSSRRTDLCGTLDYLPPEMIEGRMHD--EKVDLWSL 193

Query: 159 --LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTM 195
             LCY     L GK P++   ++  +   +R++ ++ T 
Sbjct: 194 GVLCYEF---LVGKPPFE---ANTYQETYKRISRVEFTF 226

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 28/194 (14%), Positives = 54/194 (27%), Gaps = 40/194 (20%)

Query: 27  PGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
           PGV  V+    +    ++V E + G SL+++        S    +     + +  +  HR
Sbjct: 91  PGVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD---TSPSPVGAIRAMQSLAAAADAAHR 147

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH 145
             +      P    +        V L                                  
Sbjct: 148 AGVALSIDHPSRVRVS---IDGDVVLAYPA-----------------------TMP---- 177

Query: 146 QWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTP 205
              D +P+DD+  +  +L   L  + P       +     +R T  +    P  I    P
Sbjct: 178 ---DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPI-EPADIDRDIP 233

Query: 206 PEFAEFLRYCRGLA 219
            + +      R + 
Sbjct: 234 FQISAVAA--RSVQ 245

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 12/106 (11%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV E +  G     +  +  KR  F+     ++   + S L+ +H K I HRD+KP+N L
Sbjct: 88  LVFEKMRGG----SILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLT---GTARYAS 141
                  + V + DF L      N     I T  L    G+A Y +
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 61.6 bits (150), Expect = 3e-11
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 44  LVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           ++ME +  G     + +   + F+ +    +   + + ++ +H   I HRD+KP+N L  
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162

Query: 102 VRENFNTVYLVDFGLAVDFCPN 123
            +E    + L DFG A +   N
Sbjct: 163 SKEKDAVLKLTDFGFAKETTQN 184

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 11/102 (10%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           L+ +L+  G    +LF+    R  +S         Q++  + H H+  +VHR++KP+N L
Sbjct: 87  LIFDLVTGG----ELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLL 142

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYAS 141
           +  +     V L DFGLA++       +    G  GT  Y S
Sbjct: 143 LASKLKGAAVKLADFGLAIEV---EGEQQAWFGFAGTPGYLS 181

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 61.3 bits (149), Expect = 4e-11
 Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 15/106 (14%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH--------RKKIVHRDIK 94
           L+ +     SL D  +  S     K++L LA   +S L H+H        +  I HRD+K
Sbjct: 112 LITDYHENGSLYDYLK--STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169

Query: 95  PDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARY 139
             N L  V++N  T  + D GLAV F  +     I      GT RY
Sbjct: 170 SKNIL--VKKNG-TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 60.6 bits (148), Expect = 5e-11
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           LV+E+     +    +   K FS         Q+I+ + ++H   I+HRD+   N L+  
Sbjct: 88  LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR 147

Query: 103 RENFNTVYLVDFGLAV 118
             N   + + DFGLA 
Sbjct: 148 NMN---IKIADFGLAT 160

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 60.8 bits (148), Expect = 5e-11
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)

Query: 44  LVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           +VME L  G     +     + F+ +    +   +   ++++H   I HRD+KP+N L  
Sbjct: 92  IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151

Query: 102 VRENFNTVYLVDFGLA 117
            +     + L DFG A
Sbjct: 152 SKRPNAILKLTDFGFA 167

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 60.4 bits (147), Expect = 5e-11
 Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 19/111 (17%)

Query: 45  VMELLGPSLEDLFQYCSKR-----FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            M+L     E+L  + + R           L +  Q+   +E +H K ++HRD+KP N  
Sbjct: 93  QMQLCRK--ENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIF 150

Query: 100 MGVRENFNTVYLVDFGLA---------VDFCPNCPPRIRTRGLTGTARYAS 141
             +    + V + DFGL                 P   R  G  GT  Y S
Sbjct: 151 FTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMS 198

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 60.8 bits (148), Expect = 6e-11
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 9/85 (10%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           +V EL+  G    +L     ++  FS +    +   +   +E++H + +VHRD+KP N L
Sbjct: 93  VVTELMKGG----ELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNIL 148

Query: 100 MGVR-ENFNTVYLVDFGLAVDFCPN 123
                 N  ++ + DFG A      
Sbjct: 149 YVDESGNPESIRICDFGFAKQLRAE 173

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 60.5 bits (147), Expect = 8e-11
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)

Query: 44  LVMELLGPSLEDLF-QYCSKRFSLKTVLMLADQMISRLEHVHRK-KIVHRDIKPDNFLMG 101
           +V E+LG +L  L  +Y  +   L  V  ++ Q++  L+++HR+  I+H DIKP+N LM 
Sbjct: 107 MVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLME 166

Query: 102 VR---ENFNTVYLVDFGLAVDFCPNCPPRIRTR 131
           +    EN   + + D G A  +  +    I+TR
Sbjct: 167 IVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 60.4 bits (147), Expect = 8e-11
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 15/100 (15%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           +V++LL  G    DL  +  +   F  +TV +   +++  L+++  ++I+HRD+KPDN L
Sbjct: 92  MVVDLLLGG----DLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNIL 147

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +    +   V++ DF +A       P   +   + GT  Y
Sbjct: 148 LDEHGH---VHITDFNIAAML----PRETQITTMAGTKPY 180

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKK--IVHRDIKPDNFLM 100
           LV E+L  +L DL +  + R  SL      A QM + L  +   +  I+H D+KP+N L+
Sbjct: 133 LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192

Query: 101 GVRENFNTVYLVDFGLAVDFCPNCPPRIRTR 131
                 + + +VDFG +          I++R
Sbjct: 193 -CNPKRSAIKIVDFGSSCQLGQRIYQYIQSR 222

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 15/96 (15%)

Query: 30  PHVMG----YGTSGDYNI-LVMELL--GPSLEDLFQYCSK-RFSLKTVLMLADQMISRLE 81
           P+V+          + ++ +V EL+  GP    + +  +    S          +I  +E
Sbjct: 96  PNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVPTLKPLSEDQARFYFQDLIKGIE 151

Query: 82  HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           ++H +KI+HRDIKP N L+G   +   + + DFG++
Sbjct: 152 YLHYQKIIHRDIKPSNLLVGEDGH---IKIADFGVS 184

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 15/106 (14%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH--------RKKIVHRDIK 94
           LV +     SL D         +++ ++ LA    S L H+H        +  I HRD+K
Sbjct: 117 LVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174

Query: 95  PDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARY 139
             N L  V++N  T  + D GLAV          I      GT RY
Sbjct: 175 SKNIL--VKKNG-TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 16/97 (16%)

Query: 30  PHVMGYGTS---GDYNILVMELL--GPSLEDLFQYCSKR----FSLKTVLMLADQMISRL 80
           P+++ Y  S        +VM+    G    DLF+  + +    F    +L    Q+   L
Sbjct: 83  PNIVQYRESFEENGSLYIVMDYCEGG----DLFKRINAQKGVLFQEDQILDWFVQICLAL 138

Query: 81  EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +HVH +KI+HRDIK  N  +       TV L DFG+A
Sbjct: 139 KHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIA 172

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 49/219 (22%), Positives = 79/219 (36%), Gaps = 40/219 (18%)

Query: 35  YGTSGDYNIL--VMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR 91
           YG   +   +   MELL G SL  L +           L    Q +  LE++H ++I+H 
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLHTRRILHG 174

Query: 92  DIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRG--LTGTARYASVNAHQW-- 147
           D+K DN L  +  + +   L DFG A+   P+   +    G  + GT             
Sbjct: 175 DVKADNVL--LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE--------THMA 224

Query: 148 ---LDQSPRD---DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA-- 199
              +   P D   D+ + C  +++ L G  PW       +  R   +     +  P    
Sbjct: 225 PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW------TQYFRGP-LCLKIASEPPPIRE 277

Query: 200 ICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
           I     P  A+ ++        +EP     R S   L  
Sbjct: 278 IPPSCAPLTAQAIQEG----LRKEPV---HRASAMELRR 309

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 15/100 (15%)

Query: 44  LVMELL--GPSLEDLFQY-CSK-RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV +L+  G    +LF Y   K   S K    +   ++  +  +H+  IVHRD+KP+N L
Sbjct: 101 LVFDLMKKG----ELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL 156

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +   ++ N + L DFG +    P      + R + GT  Y
Sbjct: 157 L--DDDMN-IKLTDFGFSCQLDPGE----KLREVCGTPSY 189

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 15/106 (14%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH--------RKKIVHRDIK 94
           L+       SL D  Q         + L +   + S L H+H        +  I HRD+K
Sbjct: 83  LITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140

Query: 95  PDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLTGTARY 139
             N L  V++N     + D GLAV    +     +      GT RY
Sbjct: 141 SKNIL--VKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)

Query: 45  VMELL-GPSLEDLFQYCSKR---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN-FL 99
           V+EL     L  + ++  K+      +TV     Q+ S LEH+H ++++HRDIKP N F+
Sbjct: 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI 169

Query: 100 MGVRENFNTVYLVDFGLA 117
                    V L D GL 
Sbjct: 170 T----ATGVVKLGDLGLG 183

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 58.7 bits (143), Expect = 3e-10
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 13/100 (13%)

Query: 44  LVMELL--GPSLEDLFQYCSKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LVM+L+  G    +LF    +R  ++ K   ++  Q++S ++++H   IVHRD+KP+N L
Sbjct: 83  LVMQLVSGG----ELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLL 138

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
               E  + + + DFGL+                 GT  Y
Sbjct: 139 YLTPEENSKIMITDFGLSKMEQNG-----IMSTACGTPGY 173

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 15/100 (15%)

Query: 44  LVMELL--GPSLEDLFQY-CSK-RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV +L+  G    +LF Y   K   S K    +   ++  +  +H   IVHRD+KP+N L
Sbjct: 177 LVFDLMRKG----ELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENIL 232

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +   +N   + L DFG +    P      + R L GT  Y
Sbjct: 233 L--DDNMQ-IRLSDFGFSCHLEPGE----KLRELCGTPGY 265

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)

Query: 44  LVMELL--GPSLEDLFQY-CSK-RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           LV+EL+  G    +LF     K  +S +       Q++  + ++H   IVHRD+KP+N L
Sbjct: 125 LVLELVTGG----ELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLL 180

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
                    + + DFGL+             + + GT  Y
Sbjct: 181 YATPAPDAPLKIADFGLSKIVEHQV----LMKTVCGTPGY 216

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV +     L  L      +F+L  +  +   +++ L ++HR KI+HRD+K  N L+   
Sbjct: 101 LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-- 158

Query: 104 ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT 134
                + L DFGLA  F  +     +    T
Sbjct: 159 -RDGVLKLADFGLARAF--SLAKNSQPNRYT 186

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 22/143 (15%)

Query: 43  ILVMELLGPSLEDLFQYCS--KRFSLKTVLMLADQMISRLEHVHRKK--IVHRDIKPDNF 98
           +L+ EL    L +  +        S  TVL +  Q    ++H+HR+K  I+HRD+K +N 
Sbjct: 110 LLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENL 169

Query: 99  LMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT---------GTARYAS---VNAHQ 146
           L+  +    T+ L DFG A             +             T  Y +   ++ + 
Sbjct: 170 LLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYS 226

Query: 147 WLDQSPRDDLEAL-C--YTLVYF 166
                 + D+ AL C  Y L + 
Sbjct: 227 NFPIGEKQDIWALGCILYLLCFR 249

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 7/82 (8%)

Query: 44  LVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           L+ME    S  ++F Y     R   K       Q++S +++ H+K+IVHRD+K +N L+ 
Sbjct: 91  LIMEYA--SGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD 148

Query: 102 VRENFNTVYLVDFGLAVDFCPN 123
              N   + + DFG + +F   
Sbjct: 149 ADMN---IKIADFGFSNEFTVG 167

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +V+EL    SL +L +   K  +         Q++   +++HR +++HRD+K  N  +  
Sbjct: 118 VVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 176

Query: 103 RENFNTVYLVDFGLA 117
                 V + DFGLA
Sbjct: 177 DLE---VKIGDFGLA 188

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 57.6 bits (140), Expect = 5e-10
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 5/75 (6%)

Query: 44  LVMEL-LGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +V+EL    SL +L +   K  +         Q++   +++HR +++HRD+K  N  +  
Sbjct: 92  VVLELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 150

Query: 103 RENFNTVYLVDFGLA 117
                 V + DFGLA
Sbjct: 151 DLE---VKIGDFGLA 162

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 57.8 bits (140), Expect = 6e-10
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 12/99 (12%)

Query: 44  LVMELL--GPSLEDLFQYCSK-RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           +VME +  G    DL    S      K       +++  L+ +H    +HRD+KPDN L+
Sbjct: 146 MVMEYMPGG----DLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201

Query: 101 GVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
              +    + L DFG  +         +R     GT  Y
Sbjct: 202 ---DKSGHLKLADFGTCMKMNKE--GMVRCDTAVGTPDY 235

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 30/135 (22%)

Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLFQYCSK---RFSLKTVLMLADQMISRLEH 82
            HV+ Y ++    D+ ++  E   G SL D      +    F    +  L  Q+   L +
Sbjct: 71  SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 130

Query: 83  VHRKKIVHRDIKPDNFLM----------------GVRENFNTVYLVDFGLAVDFCPNCPP 126
           +H   +VH DIKP N  +                    N     + D G           
Sbjct: 131 IHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI------ 184

Query: 127 RIRTRGLTGTARYAS 141
               +   G +R+ +
Sbjct: 185 -SSPQVEEGDSRFLA 198

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 7/88 (7%)

Query: 35  YGTSGDYNIL--VMELL-GPSLEDLFQYCSKRFSLK--TVLMLADQMISRLEHVHRKKIV 89
            G+  +   +   ME + G SL  L +           T+     Q++  L+++H  +IV
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144

Query: 90  HRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           HRDIK DN L+        + + DFG +
Sbjct: 145 HRDIKGDNVLINTYS--GVLKISDFGTS 170

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 57.1 bits (139), Expect = 7e-10
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E L   L+ L   C       T      Q+++ + + H ++++HRD+KP N L+   
Sbjct: 77  LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN-- 134

Query: 104 ENFNTVYLVDFGLA 117
                + + DFGLA
Sbjct: 135 -REGELKIADFGLA 147

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 57.2 bits (139), Expect = 8e-10
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E +   L+ +            + +   Q++  + H H+ +I+HRD+KP N L+   
Sbjct: 96  LVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN-- 153

Query: 104 ENFNTVYLVDFGLA 117
            +   + L DFGLA
Sbjct: 154 -SDGALKLADFGLA 166

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 57.3 bits (139), Expect = 8e-10
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 13/94 (13%)

Query: 30  PHVMG----YGTSGDYNILVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHV 83
           PH++       T  D  ++V+E  G    +LF Y  +  R +         Q+I  +E+ 
Sbjct: 69  PHIIKLYDVITTPTDI-VMVIEYAG---GELFDYIVEKKRMTEDEGRRFFQQIICAIEYC 124

Query: 84  HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           HR KIVHRD+KP+N L+    N   V + DFGL+
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLN---VKIADFGLS 155

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 57.0 bits (138), Expect = 9e-10
 Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 21/122 (17%)

Query: 33  MGYGTSGDYN----ILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH--- 84
           +G    G        L+       SL D  +  +   S   +  +A+ M   L ++H   
Sbjct: 84  IGAEKRGTSVDVDLWLITAFHEKGSLSDFLK--ANVVSWNELCHIAETMARGLAYLHEDI 141

Query: 85  -------RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTA 137
                  +  I HRDIK  N L  ++ N  T  + DFGLA+ F         T G  GT 
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVL--LKNNL-TACIADFGLALKFEAGKSA-GDTHGQVGTR 197

Query: 138 RY 139
           RY
Sbjct: 198 RY 199

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 56.8 bits (138), Expect = 9e-10
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E     L+  F  C+     + V     Q++  L   H + ++HRD+KP N L+   
Sbjct: 78  LVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-- 135

Query: 104 ENFNTVYLVDFGLA 117
                + L +FGLA
Sbjct: 136 -RNGELKLANFGLA 148

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 44  LVMELLGPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           +  ELLG +  +  +  + + + L  V  +A Q+   L  +H  ++ H D+KP+N L 
Sbjct: 99  IAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILF 156

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 17/102 (16%)

Query: 44  LVMELL--GPSLEDLF----QYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
           LV+ L+  G    DL           F     +  A ++   LE +HR++IV+RD+KP+N
Sbjct: 261 LVLTLMNGG----DLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPEN 316

Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
            L+    +   + + D GLAV      P     +G  GT  Y
Sbjct: 317 ILLDDHGH---IRISDLGLAVHV----PEGQTIKGRVGTVGY 351

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 43/210 (20%), Positives = 77/210 (36%), Gaps = 53/210 (25%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH-RKKIVHRDIKPDNFLMGV 102
           + MEL+G   E L +        + +  +   ++  L ++  +  ++HRD+KP N L+  
Sbjct: 101 IAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE 160

Query: 103 RENFNTVYLVDFGLAVDF-----------CPN--CPPRIRTRGLTGTARYASVNAHQWLD 149
           R     + L DFG++              C     P RI     T    Y  + A  W  
Sbjct: 161 RGQ---IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPD-Y-DIRADVW-- 213

Query: 150 QSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPP--- 206
                   +L  +LV    G+ P+++ K           T+ ++      + +  PP   
Sbjct: 214 --------SLGISLVELATGQFPYKNCK-----------TDFEVLT---KVLQEEPPLLP 251

Query: 207 -------EFAEFLRYCRGLAFSEEPNYGKL 229
                  +F  F++ C      + P Y KL
Sbjct: 252 GHMGFSGDFQSFVKDCLTKDHRKRPKYNKL 281

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 44  LVMELLGPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           L+ E LGPSL ++    +   F ++ + +   +++  L ++ +  + H D+KP+N L+
Sbjct: 113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILL 170

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 7/108 (6%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
            + E + G +L  + +    ++     +  A  + S + ++H   I+HRD+   N L  V
Sbjct: 84  FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCL--V 141

Query: 103 RENFNTVYLVDFGLA---VDFCPNCPPRIRTRGLTGTARYASVNAHQW 147
           REN   V + DFGLA   VD           +      RY  V    W
Sbjct: 142 REN-KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E +  ++ D  +        + V     Q+I+ +   H   I+HRDIKP+N L+   
Sbjct: 101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-- 158

Query: 104 ENFNTVYLVDFGLA 117
                V L DFG A
Sbjct: 159 -QSGVVKLCDFGFA 171

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 55.6 bits (135), Expect = 2e-09
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E    ++        +      V  +  Q +  +   H+   +HRD+KP+N L+   
Sbjct: 79  LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT-- 136

Query: 104 ENFNTVYLVDFGLA 117
              + + L DFG A
Sbjct: 137 -KHSVIKLCDFGFA 149

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 19/103 (18%)

Query: 30  PHVMGY------GTSGDYNILVMELL-GPSLEDLFQYCSKR---FSLKTVLMLADQMISR 79
           P+++ Y       T+    I VME   G  L  +    +K       + VL +  Q+   
Sbjct: 65  PNIVRYYDRIIDRTNTTLYI-VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123

Query: 80  LEHVHRKK-----IVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           L+  HR+      ++HRD+KP N  +        V L DFGLA
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLGDFGLA 163

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 55.5 bits (134), Expect = 3e-09
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 24/126 (19%)

Query: 30  PHVMG-YGTSGDYN--ILVMELLGPSLEDLFQY----------CSKRFSLKTVLMLADQM 76
            + +   G   +Y+   ++ E +    + + ++           +    ++ +  +   +
Sbjct: 103 EYCLTCEGIITNYDEVYIIYEYM--ENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSV 160

Query: 77  ISRLEHVHRKK-IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTG 135
           ++   ++H +K I HRD+KP N LM        V L DFG +           + +G  G
Sbjct: 161 LNSFSYIHNEKNICHRDVKPSNILMDKNGR---VKLSDFGESEYM-----VDKKIKGSRG 212

Query: 136 TARYAS 141
           T  +  
Sbjct: 213 TYEFMP 218

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 28/111 (25%), Positives = 39/111 (35%), Gaps = 20/111 (18%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH---------RKKIVHRDI 93
           LVME     SL              +   LA  +   L ++H         +  I HRD+
Sbjct: 89  LVMEYYPNGSLXKYLS--LHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDL 146

Query: 94  KPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-----IRTRGLTGTARY 139
              N L  V+ +  T  + DFGL++    N   R            GT RY
Sbjct: 147 NSRNVL--VKNDG-TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV + +   LE + +  S   +   +       +  LE++H+  I+HRD+KP+N L+   
Sbjct: 89  LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD-- 146

Query: 104 ENFNTVYLVDFGLA 117
                + L DFGLA
Sbjct: 147 -ENGVLKLADFGLA 159

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 55.5 bits (134), Expect = 3e-09
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVME    S  DL +   K      +  +    +  L ++H   ++HRD+K  N L+   
Sbjct: 131 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 190

Query: 104 ENFNTVYLVDFGLA 117
                V L DFG A
Sbjct: 191 GL---VKLGDFGSA 201

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 18/104 (17%)

Query: 44  LVMELL--GPSLEDLF------QYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKP 95
           LVM ++  G    D+          +  F     +    Q++S LEH+H++ I++RD+KP
Sbjct: 262 LVMTIMNGG----DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKP 317

Query: 96  DNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +N L+    N   V + D GLAV+       + +T+G  GT  +
Sbjct: 318 ENVLLDDDGN---VRISDLGLAVE---LKAGQTKTKGYAGTPGF 355

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 44  LVMELLGPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLM 100
           +V ELLG S  D  +      F L  +  +A Q+   +  +H  K+ H D+KP+N L 
Sbjct: 94  IVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 19/105 (18%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISR-LEHVHRKK--IVHRDIKPDNFL 99
           +VME +    L       +        L L    I+  +E++  +   IVHRD++  N  
Sbjct: 98  MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLD-IALGIEYMQNQNPPIVHRDLRSPNIF 156

Query: 100 MGVRENFNTVYL--VDFGLAVDFCPNCPPRIRTRGLT---GTARY 139
           +   +    V     DFGL+         +     ++   G  ++
Sbjct: 157 LQSLDENAPVCAKVADFGLS---------QQSVHSVSGLLGNFQW 192

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 55.3 bits (133), Expect = 4e-09
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 13/150 (8%)

Query: 16  ERNFYEKLHGA----PGVPHVMG-------YGTSGDYNILVMELLGPSLEDLFQ-YCSKR 63
           E    + +  +    P    V+         G +G +  +V E+LG  L         + 
Sbjct: 83  EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG 142

Query: 64  FSLKTVLMLADQMISRLEHVHRK-KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCP 122
             L  V  +  Q++  L+++H K +I+H DIKP+N L+ V E +      +         
Sbjct: 143 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 202

Query: 123 NCPPRIRTRGLTGTARYASVNAHQWLDQSP 152
             P          TA    VN  +  +   
Sbjct: 203 PPPSGSAVSTAPATAGNFLVNPLEPKNAEK 232

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV E L   L+     C    ++  V +   Q++  L + HR+K++HRD+KP N L+   
Sbjct: 77  LVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN-- 134

Query: 104 ENFNTVYLVDFGLA 117
                + L DFGLA
Sbjct: 135 -ERGELKLADFGLA 147

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 13/113 (11%)

Query: 33  MGYGTSGDYNILVMELL-GPSLEDLF--QYCSKRFSLKTVLMLADQMISR-LEHVHRKK- 87
           MG  T      +V E L   SL  L       ++   +  L +A   +++ + ++H +  
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD-VAKGMNYLHNRNP 158

Query: 88  -IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
            IVHR++K  N L+   + + TV + DFGL+          + ++   GT  +
Sbjct: 159 PIVHRNLKSPNLLVD--KKY-TVKVCDFGLS---RLKASTFLSSKSAAGTPEW 205

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 54.3 bits (131), Expect = 7e-09
 Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +VME     S+ D+ +  +K  +   +  +    +  LE++H  + +HRDIK  N L+  
Sbjct: 101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT 160

Query: 103 RENFNTVYLVDFGLA 117
             +     L DFG+A
Sbjct: 161 EGH---AKLADFGVA 172

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 54.2 bits (131), Expect = 7e-09
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 12/100 (12%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
             +     G    +L +Y  K   F          +++S LE++H K I+HRD+KP+N L
Sbjct: 107 FGLSYAKNG----ELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENIL 162

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +    +   + + DFG A         + R     GTA+Y
Sbjct: 163 LNEDMH---IQITDFGTA-KVLSPESKQARANSFVGTAQY 198

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           LVME   G  L  L     +R   +       +++  ++ VHR   VHRDIKPDN L+  
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL-- 195

Query: 103 RENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
            +    + L DFG  +    +    +R+    GT  Y
Sbjct: 196 -DRCGHIRLADFGSCLKLRAD--GTVRSLVAVGTPDY 229

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 53.9 bits (130), Expect = 9e-09
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 14/99 (14%)

Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQM--ISR---- 79
           P+++ Y TS    D   LVM+LL G S+ D+ ++   +   K+ ++    +  I R    
Sbjct: 73  PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132

Query: 80  -LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
            LE++H+   +HRD+K  N L+G      +V + DFG++
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVS 168

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 54.1 bits (131), Expect = 9e-09
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 5/88 (5%)

Query: 32  VMGYGTSGDYNI-LVMELLGPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIV 89
                T  +  + LV E +   L              +T+  L  Q +  L+ +H   IV
Sbjct: 83  CATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIV 142

Query: 90  HRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           HRD+KP+N L+    +  TV L DFGLA
Sbjct: 143 HRDLKPENILVT---SGGTVKLADFGLA 167

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 53.9 bits (130), Expect = 9e-09
 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 16/115 (13%)

Query: 32  VMGYGTSGDYNILVMELL-GPSLEDLFQYCSKR--FSLKTVLMLADQMISR-LEHVHR-- 85
           V  YG   +   LVME   G SL ++         ++    +    Q  S+ + ++H   
Sbjct: 64  VKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ-CSQGVAYLHSMQ 122

Query: 86  -KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
            K ++HRD+KP N L+        + + DFG A      C  +       G+A +
Sbjct: 123 PKALIHRDLKPPNLLLV--AGGTVLKICDFGTA------CDIQTHMTNNKGSAAW 169

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           L+ E     L+          S++ +     Q+I+ +   H ++ +HRD+KP N L+ V 
Sbjct: 110 LIFEYAENDLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVS 168

Query: 104 ENFNT--VYLVDFGLA 117
           +   T  + + DFGLA
Sbjct: 169 DASETPVLKIGDFGLA 184

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 53.7 bits (130), Expect = 1e-08
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 30  PHVMG----YGTSGDYNILVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHV 83
           PH++       T  D+  +VME +  S  +LF Y  K  R        L  Q++S +++ 
Sbjct: 71  PHIIKLYQVISTPTDF-FMVMEYV--SGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127

Query: 84  HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           HR  +VHRD+KP+N L+    N     + DFGL+
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMN---AKIADFGLS 158

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 53.5 bits (129), Expect = 1e-08
 Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 44  LVMELLGPSLEDLFQY-CSK-RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           ++ME    S  +L++  C+  RFS         Q++S + + H  +I HRD+K +N L+ 
Sbjct: 93  IIMEYA--SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLD 150

Query: 102 VRENFNTVYLVDFGLAVDFCPNCPPR 127
                  + + DFG +     +  P+
Sbjct: 151 GSPAPR-LKICDFGYSKSSVLHSQPK 175

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +++E   G +++ +     +  +   + ++  QM+  L  +H K+I+HRD+K  N LM +
Sbjct: 93  IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL 152

Query: 103 RENFNTVYLVDFGLA 117
             +   + L DFG++
Sbjct: 153 EGD---IRLADFGVS 164

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 53.3 bits (129), Expect = 2e-08
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)

Query: 44  LVMELLGPSLEDLFQYCSKR-FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           LV E L   L+      +     L  +     Q++  L   H  +++HRD+KP N L+  
Sbjct: 79  LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN- 137

Query: 103 RENFNTVYLVDFGLAVDFCPNCPPRIRT 130
                 + L DFGLA  F    P R  T
Sbjct: 138 --TEGAIKLADFGLARAF--GVPVRTYT 161

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 48/242 (19%), Positives = 85/242 (35%), Gaps = 52/242 (21%)

Query: 30  PHVMG-YG---TSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++G YG   + G+ +I  ME + G SL+ + +  + R   + +  ++  +I  L ++ 
Sbjct: 91  PYIVGFYGAFYSDGEISI-CMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLR 148

Query: 85  RK-KIVHRDIKPDNFLMGVRENFNTVYLVDFG--------LAVDF--CPN--CPPRIRTR 131
            K KI+HRD+KP N L+  R     + L DFG        +A  F    +   P R++  
Sbjct: 149 EKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 205

Query: 132 -----------GLT----GTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                      GL+       RY          +                          
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPP---------EFAEFLRYCRGLAFSEEPNYG 227
           K   +      + E+      + I    PP         EF +F+  C     +E  +  
Sbjct: 266 KFGMDSRPPMAIFELL-----DYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320

Query: 228 KL 229
           +L
Sbjct: 321 QL 322

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 32  VMGYGTSGDYNI-LVMELLGPSLEDLFQYCSKRF-SLKTVLMLADQMISRLEHVHRKKIV 89
                T  +  + LV E +   L        +     +T+  +  Q++  L+ +H  ++V
Sbjct: 83  CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVV 142

Query: 90  HRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           HRD+KP N L+    +   + L DFGLA
Sbjct: 143 HRDLKPQNILVT---SSGQIKLADFGLA 167

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)

Query: 44  LVMELL--GPSLEDLFQYCSK---RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           LVM+    G    DL    SK   R   +       +M+  ++ VH+   VHRDIKPDN 
Sbjct: 151 LVMDYYVGG----DLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNI 206

Query: 99  LMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           LM   +    + L DFG  +    +    +++    GT  Y
Sbjct: 207 LM---DMNGHIRLADFGSCLKLMED--GTVQSSVAVGTPDY 242

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 12/94 (12%)

Query: 30  PHVMG----YGTSGDYNILVMELLGPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHV 83
           PH++       T  D   +VME +  S  +LF Y  K  R   K    L  Q++S +++ 
Sbjct: 76  PHIIKLYQVISTPSDI-FMVMEYV--SGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132

Query: 84  HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           HR  +VHRD+KP+N L+    N     + DFGL+
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMN---AKIADFGLS 163

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 50/229 (21%), Positives = 87/229 (37%), Gaps = 57/229 (24%)

Query: 33  MGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK---I 88
            G         LVME   G  L  +     KR     ++  A Q+   + ++H +    I
Sbjct: 72  RGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129

Query: 89  VHRDIKPDNFLMGVRENF-----NTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVN 143
           +HRD+K  N L+  +          + + DFGLA             R    T + ++  
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLA-------------REWHRTTKMSAAG 176

Query: 144 AHQWLDQSPRDDLEALCYTL------VY--------FLRGKLPWQSIKSDNEETRMQRVT 189
           A+ W+  +P    E +  ++      V+         L G++P++ I  D        V 
Sbjct: 177 AYAWM--AP----EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--DGLAV-AYGVA 227

Query: 190 EMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
             KL +    I    P  FA+ +  C    ++ +P+    R SF N+L+
Sbjct: 228 MNKLALP---IPSTCPEPFAKLMEDC----WNPDPH---SRPSFTNILD 266

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 52.3 bits (126), Expect = 4e-08
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 11/88 (12%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLAD------QMISRLEHVHRKKIVHRDIKPDN 97
           LV+E +    E +++       LK  + +        Q++  L ++H   I HRDIKP N
Sbjct: 115 LVLEYVP---ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQN 171

Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCP 125
            L  +      + L+DFG A       P
Sbjct: 172 LL--LDPPSGVLKLIDFGSAKILIAGEP 197

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 15/90 (16%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLAD------QMISRLEHVHRKKIVHRDIKPDN 97
           LV++ +    E +++        K  L +        Q+   L ++H   I HRDIKP N
Sbjct: 130 LVLDYVP---ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN 186

Query: 98  FLMGVRENFNTVYLV--DFGLAVDFCPNCP 125
            L+    + +T  L   DFG A       P
Sbjct: 187 LLL----DPDTAVLKLCDFGSAKQLVRGEP 212

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 51.4 bits (124), Expect = 5e-08
 Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           Q+++ + ++H   I HRDIKP+N L+  R+N   + + DFGLA
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLA 152

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 51.5 bits (124), Expect = 6e-08
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR 127
           Q+++ + ++H   I HRDIKP+N L+  R+N   + + DFGLA  F  N   R
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRER 162

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 51.0 bits (123), Expect = 9e-08
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 44  LVMELLGPSLEDL-----FQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNF 98
           LV E +   L+            +   L  V     Q++  L   H  KI+HRD+KP N 
Sbjct: 80  LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNL 139

Query: 99  LMGVRENFNTVYLVDFGLA 117
           L+  R     + L DFGLA
Sbjct: 140 LINKRGQ---LKLGDFGLA 155

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 11/96 (11%)

Query: 44  LVME--------LLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKP 95
           L+ +        ++             +     V  L  Q++  + ++H   ++HRD+KP
Sbjct: 97  LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKP 156

Query: 96  DNFLMGVRENFN-TVYLVDFGLAVDFCPNCPPRIRT 130
            N L+         V + D G A  F  N P +   
Sbjct: 157 ANILVMGEGPERGRVKIADMGFARLF--NSPLKPLA 190

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 50.2 bits (121), Expect = 2e-07
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           ++M+ +  G    +LF    K  RF        A ++   LE++H K I++RD+KP+N L
Sbjct: 83  MIMDYIEGG----ELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENIL 138

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +   + + DFG A
Sbjct: 139 LDKNGH---IKITDFGFA 153

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)

Query: 55  DLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLV 112
           ++F +  +  RFS       A Q++   E++H   +++RD+KP+N L+  +     + + 
Sbjct: 127 EMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY---IQVT 183

Query: 113 DFGLA 117
           DFG A
Sbjct: 184 DFGFA 188

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLA---DQMISRLEHVHRK-KIVHRDIKPDNFL 99
           + MEL+  SL+  ++    +       +L      ++  LEH+H K  ++HRD+KP N L
Sbjct: 83  ICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 142

Query: 100 MGVRENFNTVYLVDFGLA 117
           +        V + DFG++
Sbjct: 143 INAL---GQVKMCDFGIS 157

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 49.8 bits (120), Expect = 2e-07
 Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           L++E L  G    +LF    +   F   T      ++   L H+H+K I++RD+KP+N +
Sbjct: 98  LILEYLSGG----ELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIM 153

Query: 100 MGVRENFNTVYLVDFGLA 117
           +  + +   V L DFGL 
Sbjct: 154 LNHQGH---VKLTDFGLC 168

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            VME +  G    DL  +  K  RF        A ++IS L  +H K I++RD+K DN L
Sbjct: 101 FVMEFVNGG----DLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVL 156

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +     L DFG+ 
Sbjct: 157 LDHEGH---CKLADFGMC 171

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            VME    G    +LF + S+   F+ +       +++S LE++H + +V+RDIK +N +
Sbjct: 82  FVMEYANGG----ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLM 137

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +   + + DFGL 
Sbjct: 138 LDKDGH---IKITDFGLC 152

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +VME L G SL D+            +  +  + +  LE +H  +++HRDIK DN L+G+
Sbjct: 94  VVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151

Query: 103 RENFNTVYLVDFGLA 117
             +   V L DFG  
Sbjct: 152 DGS---VKLTDFGFC 163

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            V+E +  G    DL  +  +  +   +     + ++   L ++H + I++RD+K DN L
Sbjct: 87  FVIEYVNGG----DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 142

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +   + L D+G+ 
Sbjct: 143 LDSEGH---IKLTDYGMC 157

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 14/100 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            VME L  G    DL  +     +F L      A ++I  L+ +H K IV+RD+K DN L
Sbjct: 95  FVMEYLNGG----DLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 150

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +    +   + + DFG+  +   N     +T    GT  Y
Sbjct: 151 LDKDGH---IKIADFGMCKE---NMLGDAKTNTFCGTPDY 184

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 44  LVMELLGPSLEDL----FQYCSKRFSLKTVLMLADQMISRLEHVHRK-KIVHRDIKPDNF 98
           + MEL+  S +      +         + +  +    +  L H+    KI+HRDIKP N 
Sbjct: 98  ICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNI 157

Query: 99  LMGVRENFNTVYLVDFG 115
           L+    N   + L DFG
Sbjct: 158 LLDRSGN---IKLCDFG 171

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 4e-07
 Identities = 46/331 (13%), Positives = 89/331 (26%), Gaps = 90/331 (27%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILV----MELLGPSLE-D 55
           +  +   +   RLFW      K      V   +      +Y  L+     E   PS+   
Sbjct: 55  IMSKDAVSGTLRLFW--TLLSK--QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTR 110

Query: 56  LFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL----MG---------- 101
           ++     R       + A   +SRL+   + +    +++P   +    +           
Sbjct: 111 MYIEQRDRLY-NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169

Query: 102 ------VRENF-NTVYLVDFG--------------LAVDFCPN--------CPPRIRT-- 130
                 V+      ++ ++                L     PN           ++R   
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 131 -----RGLTGTARYASVNAHQWLD--QSPRDDLEAL---CYTLV--------YFLRGKLP 172
                R L  +  Y   N    L   Q+ +    A    C  L+         FL     
Sbjct: 230 IQAELRRLLKSKPY--ENCLLVLLNVQNAK-AWNAFNLSCKILLTTRFKQVTDFLSAATT 286

Query: 173 WQSIKSDN------EETR--MQRVTEMKLTMTPEAICEGTPPE---FAEFLR--YCRGLA 219
                  +      +E +  + +  + +    P  +    P      AE +R        
Sbjct: 287 THISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT-WD 345

Query: 220 FSEEPNYGKLRDSFRNLLENKERCEFDLRYD 250
             +  N  KL     + L   E  E+   +D
Sbjct: 346 NWKHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 49.3 bits (118), Expect = 4e-07
 Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           ++ME L G +L D+      R + + +  + + ++  L ++H + ++HRDIK D+ L+ +
Sbjct: 119 VLMEFLQGGALTDI--VSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL 176

Query: 103 RENFNTVYLVDFGLA 117
                 V L DFG  
Sbjct: 177 DGR---VKLSDFGFC 188

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 49.1 bits (118), Expect = 4e-07
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            VME +  G    DL  +  +  RF     +  A ++   L  +  K I++RD+K DN +
Sbjct: 98  FVMEYVNGG----DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 153

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +   + + DFG+ 
Sbjct: 154 LDSEGH---IKIADFGMC 168

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            V++ +  G    +LF +  +   F        A ++ S L ++H   IV+RD+KP+N L
Sbjct: 116 FVLDYINGG----ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENIL 171

Query: 100 MGVRENFNTVYLVDFGLA 117
           +  + +   + L DFGL 
Sbjct: 172 LDSQGH---IVLTDFGLC 186

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 48.9 bits (117), Expect = 4e-07
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)

Query: 44  LVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMG 101
           LVME     S+ DL +         + +  +  +++  L H+H+ K++HRDIK  N L+ 
Sbjct: 104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163

Query: 102 VRENFNTVYLVDFGLA 117
             EN   V LVDFG++
Sbjct: 164 --ENAE-VKLVDFGVS 176

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            V+E +  G    DL  +  +  +   +     + ++   L ++H + I++RD+K DN L
Sbjct: 130 FVIEYVNGG----DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 185

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +   + L D+G+ 
Sbjct: 186 LDSEGH---IKLTDYGMC 200

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 49.0 bits (117), Expect = 6e-07
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 15/90 (16%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLAD------QMISRLEHVHRKKIVHRDIKPDN 97
           ++ME +    + L +           + +        Q+   +  +H   I HRDIKP N
Sbjct: 115 VIMEYVP---DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQN 171

Query: 98  FLMGVRENFNTVYLV--DFGLAVDFCPNCP 125
            L+    N     L   DFG A    P+ P
Sbjct: 172 LLV----NSKDNTLKLCDFGSAKKLIPSEP 197

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 48.9 bits (116), Expect = 7e-07
 Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
            VME +  G    DL  +  +  RF     +  A ++   L  +  K I++RD+K DN +
Sbjct: 419 FVMEYVNGG----DLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 474

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +   + + DFG+ 
Sbjct: 475 LDSEGH---IKIADFGMC 489

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 48.3 bits (116), Expect = 7e-07
 Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           L+++ L  G    DLF   SK   F+ + V     ++   L+H+H   I++RD+KP+N L
Sbjct: 103 LILDFLRGG----DLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENIL 158

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +   + L DFGL+
Sbjct: 159 LDEEGH---IKLTDFGLS 173

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 48.4 bits (116), Expect = 8e-07
 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 11/78 (14%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFL 99
           L+++ +  G    +LF + S+  RF+   V +   +++  LEH+H+  I++RDIK +N L
Sbjct: 136 LILDYINGG----ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENIL 191

Query: 100 MGVRENFNTVYLVDFGLA 117
           +    +   V L DFGL+
Sbjct: 192 LDSNGH---VVLTDFGLS 206

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 48.1 bits (115), Expect = 9e-07
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           ++ME L G S  DL +          +  +  +++  L+++H +K +HRDIK  N L+  
Sbjct: 97  IIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE 154

Query: 103 RENFNTVYLVDFGLA 117
                 V L DFG+A
Sbjct: 155 HGE---VKLADFGVA 166

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 30  PHVMGYGTS---GDYNILVMELL-GPSLEDLFQ-YCSKRFSLKTVLMLADQMISRLEHVH 84
           P+++ Y  +    +   +V   +   S +DL   +     +   +  +   ++  L+++H
Sbjct: 86  PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
               VHR +K  + L+ V      VYL      
Sbjct: 146 HMGYVHRSVKASHILISVD---GKVYLSGLRSN 175

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 17/119 (14%)

Query: 27  PGVPHVMGYGTSGDYNIL--VMELL-GPSLED-LFQYCSKRFSLKTVLMLADQMISRLEH 82
           P V  V+G   S        +   +   SL + L +  +        +  A  M   +  
Sbjct: 67  PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126

Query: 83  VHRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY 139
           +H  +  I    +   + ++   E+  T  +    +   F        ++ G      +
Sbjct: 127 LHTLEPLIPRHALNSRSVMID--EDM-TARISMADVKFSF--------QSPGRMYAPAW 174

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 39/206 (18%), Positives = 74/206 (35%), Gaps = 38/206 (18%)

Query: 43  ILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK--IVHRDIKPDNFL 99
           +LV EL+   +L+   +   K   +K +     Q++  L+ +H +   I+HRD+K DN  
Sbjct: 105 VLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF 163

Query: 100 MGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-------DQSP 152
             +     +V + D GLA                  +   A +   +++           
Sbjct: 164 --ITGPTGSVKIGDLGLA-------------TLKRASFAKAVIGTPEFMAPEMYEEKYDE 208

Query: 153 RDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
             D+ A    ++     + P+      N     +RVT       P +  +   PE  E +
Sbjct: 209 SVDVYAFGMCMLEMATSEYPYSEC--QNAAQIYRRVTSGVK---PASFDKVAIPEVKEII 263

Query: 213 RYCRGLAFSEEPNYGKLRDSFRNLLE 238
             C      +  +    R S ++LL 
Sbjct: 264 EGC----IRQNKD---ERYSIKDLLN 282

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 6/74 (8%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           +VMEL+     +L Q        + +  L  QM+  ++H+H   I+HRD+KP N +  V+
Sbjct: 107 IVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV--VK 161

Query: 104 ENFNTVYLVDFGLA 117
            +  T+ ++DFGLA
Sbjct: 162 SD-CTLKILDFGLA 174

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 6/74 (8%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVMEL+     +L Q        + +  L  QM+  ++H+H   I+HRD+KP N +  V+
Sbjct: 144 LVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV--VK 198

Query: 104 ENFNTVYLVDFGLA 117
            +  T+ ++DFGLA
Sbjct: 199 SD-CTLKILDFGLA 211

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 12/79 (15%)

Query: 44  LVMELL--GPSLEDLFQYCSK--RFSLKTVLMLADQMISRLEHVHRKK-IVHRDIKPDNF 98
            VME    G    +LF + S+   FS         +++S L+++H +K +V+RD+K +N 
Sbjct: 225 FVMEYANGG----ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 280

Query: 99  LMGVRENFNTVYLVDFGLA 117
           ++    +   + + DFGL 
Sbjct: 281 MLDKDGH---IKITDFGLC 296

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVM  +     DL +    +FS + +  L  QM+  L+++H   +VHRD+KP N    V 
Sbjct: 106 LVMPFMQ---TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLA--VN 160

Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 161 ED-CELKILDFGLA 173

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 17/95 (17%)

Query: 41  YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD------QMISRLEHVHRK--KIVHRD 92
           Y  +VME +    + L + C   +  +             Q+I  +  +H     + HRD
Sbjct: 100 YLNVVMEYVP---DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRD 156

Query: 93  IKPDNFLMGVRENFNTVYLV--DFGLAVDFCPNCP 125
           IKP N L+    N     L   DFG A    P+ P
Sbjct: 157 IKPHNVLV----NEADGTLKLCDFGSAKKLSPSEP 187

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV  L+G  L ++ +   ++ +   V  L  Q++  L+++H   I+HRD+KP N    V 
Sbjct: 111 LVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA--VN 166

Query: 104 ENFNTVYLVDFGLA 117
           E+   + ++DFGLA
Sbjct: 167 ED-CELKILDFGLA 179

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +++  L++ H   I+HRD+KP N +  +      + L+D+GLA
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLA 178

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 5/88 (5%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LVM  +G  L  L +   ++     +  L  QM+  L ++H   I+HRD+KP N    V 
Sbjct: 107 LVMPFMGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLA--VN 162

Query: 104 ENFNTVYLVDFGLAVDFCPNCPPRIRTR 131
           E+   + ++DFGLA          + TR
Sbjct: 163 ED-CELKILDFGLARQADSEMTGYVVTR 189

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 41.0 bits (95), Expect = 2e-04
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 2/97 (2%)

Query: 18  NFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMI 77
             ++  +   G  +        D   +V+E       DL Q  +K  SL T   +  Q+ 
Sbjct: 113 KAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE-FGGIDLEQMRTKLSSLATAKSILHQLT 171

Query: 78  SRLEHVHRK-KIVHRDIKPDNFLMGVRENFNTVYLVD 113
           + L       +  HRD+   N L+         Y ++
Sbjct: 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLN 208

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 4/75 (5%)

Query: 44  LVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
           +VMEL+ G       +    R  +KT+L +     + +E++  K  +HRD+   N L+  
Sbjct: 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT- 247

Query: 103 RENFNTVYLVDFGLA 117
            E  N + + DFG++
Sbjct: 248 -EK-NVLKISDFGMS 260

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)

Query: 80  LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           +  +H    +HRDIK  N L+   E F    + DFGLA
Sbjct: 146 INFLHENHHIHRDIKSANILLD--EAFTAK-ISDFGLA 180

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 3/31 (9%)

Query: 87  KIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
           KI+HRD+K  N L+   E F  V + DFGLA
Sbjct: 154 KIIHRDVKAANILLD--EEFEAV-VGDFGLA 181

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 44  LVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
           LV EL+   L  +        S + +      ++  L  +H   +VHRD+ P N L  + 
Sbjct: 111 LVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL--LA 168

Query: 104 ENFNTVYLVDFGLA 117
           +N N + + DF LA
Sbjct: 169 DN-NDITICDFNLA 181

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 39.5 bits (93), Expect = 6e-04
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 34/151 (22%)

Query: 34  GYGTSGDYNILVMELL--GPSLED-LFQYCSKRFSL--KTVLMLADQMISRLEHVHRKKI 88
           G+    +  IL+ + +  G +L+  L+       S+  +  L +       L ++H + I
Sbjct: 102 GFCDERNEMILIYKYMENG-NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160

Query: 89  VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL 148
           +HRD+K  N L+   ENF    + DFG++          + T  + GT  Y         
Sbjct: 161 IHRDVKSINILLD--ENFVP-KITDFGISKKGTELDQTHLSTV-VKGTLGYI-------- 208

Query: 149 DQSPRDDLEALCYTLVYFLRGKLPWQSIKSD 179
                 D E       YF++G+L   + KSD
Sbjct: 209 ------DPE-------YFIKGRL---TEKSD 223

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	257
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.87
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.72
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.52
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.21
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.18
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.96
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.9
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.79
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.47
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.44
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.37
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	98.31
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.0
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.81
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.01
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.88
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.69
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.58
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.56
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.97
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	95.76
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.24
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	94.64
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	92.6
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	91.02
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	90.24
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	88.82
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	86.92
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	85.52
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	83.83
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	82.59

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=6.3e-54  Score=344.78  Aligned_cols=231  Identities=20%  Similarity=0.284  Sum_probs=196.6

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++++|. ||||+++++++.+++.+|+||||| ||+|.+++.. .+.+++..+..++.|++.||.|||++
T Consensus        74 ~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~-~~~l~e~~~~~~~~qi~~al~ylH~~  151 (311)
T 4aw0_A           74 NKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGK  151 (311)
T ss_dssp             TCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            44567999999999998 999999999999999999999999 9999999985 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++..+...... .......||+.|+|||++.+..++.++||||+||++|+|
T Consensus       152 ~IiHRDlKPeNILl~~~---g~vKl~DFGla~~~~~~~~~-~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem  227 (311)
T 4aw0_A          152 GIIHRDLKPENILLNED---MHIQITDFGTAKVLSPESKQ-ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL  227 (311)
T ss_dssp             TEECSCCSGGGEEECTT---SCEEECCCTTCEECCTTTTC-CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCHHHeEEcCC---CCEEEEEcCCceecCCCCCc-ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999876   89999999999876543222 223567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFD  246 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~  246 (257)
                      ++|..||.+   .+....+.++......++     ..+|+++.++|.+||..||++|||++++...  ..+++++   +-
T Consensus       228 l~G~~PF~~---~~~~~~~~~i~~~~~~~p-----~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~--~~i~~Hp---~F  294 (311)
T 4aw0_A          228 VAGLPPFRA---GNEGLIFAKIIKLEYDFP-----EKFFPKARDLVEKLLVLDATKRLGCEEMEGY--GPLKAHP---FF  294 (311)
T ss_dssp             HHSSCSSCC---SSHHHHHHHHHHTCCCCC-----TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH--HHHHTSG---GG
T ss_pred             HhCCCCCCC---CCHHHHHHHHHcCCCCCC-----cccCHHHHHHHHHHccCCHhHCcChHHHcCC--HHHHCCC---Cc
Confidence            999999987   345555566665544333     6789999999999999999999999987532  2233444   55


Q ss_pred             CCccccccccC
Q psy2769         247 LRYDWTLLERK  257 (257)
Q Consensus       247 ~~~~~~~~~~~  257 (257)
                      ..+||+.|.++
T Consensus       295 ~~idw~~l~~~  305 (311)
T 4aw0_A          295 ESVTWENLHQQ  305 (311)
T ss_dssp             TTCCCTTGGGS
T ss_pred             CCCCHHHhcCC
Confidence            67899998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.1e-52  Score=335.52  Aligned_cols=224  Identities=21%  Similarity=0.257  Sum_probs=180.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.|.+|+.++++|+ ||||+++++++.. +.+++||||| +|+|.+++......+++.++..++.|++.||.|||+++
T Consensus        75 ~~~~f~~E~~il~~l~-HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~  152 (307)
T 3omv_A           75 QFQAFRNEVAVLRKTR-HVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN  152 (307)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEECS-SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeEEEEEEC-CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4567999999999998 9999999999865 4689999999 99999999866678999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC---CCCCcchHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL---DQSPRDDLEALCYTLV  164 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slg~~l~  164 (257)
                      |+||||||+|||++.+   +.+||+|||++......... .......||+.|+|||++.+.   .++.++|||||||++|
T Consensus       153 IiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~-~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~  228 (307)
T 3omv_A          153 IIHRDMKSNNIFLHEG---LTVKIGDFGLATVKSRWSGS-QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY  228 (307)
T ss_dssp             CBCSCCCSSSEEEETT---EEEEECCCSSCBC-------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHH
T ss_pred             ccCCccCHHHEEECCC---CcEEEeeccCceecccCCcc-eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHH
Confidence            9999999999999876   89999999999765432211 122456899999999999643   5788999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ||++|+.||.+.....  .....+.........+..+..+|+.+.+++.+||+.||++|||+.++++.|+.+....
T Consensus       229 Elltg~~Pf~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          229 ELMTGELPYSHINNRD--QIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             HHHHSSCTTTTCCCHH--HHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             HHHHCCCCCCCCChHH--HHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence            9999999998754332  2222222222222234455789999999999999999999999999999998775543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.9e-51  Score=335.05  Aligned_cols=210  Identities=21%  Similarity=0.291  Sum_probs=180.9

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++.+. ||||+++++++.+++.+|+||||| ||+|.+++.  ...+++..+..++.|++.||.|||++
T Consensus       113 ~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~l~e~~~~~~~~qi~~aL~ylH~~  189 (346)
T 4fih_A          113 QRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQ  189 (346)
T ss_dssp             SSGGGGHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45677999999999998 999999999999999999999999 999999998  46799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+|||++.+   +.+||+|||++..+.....   .....+||+.|+|||++.+..++.++|||||||++|||
T Consensus       190 ~IiHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~~---~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem  263 (346)
T 4fih_A          190 GVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM  263 (346)
T ss_dssp             TEECCCCSGGGEEECTT---CCEEECCCTTCEECCSSSC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CcccccCCHHHEEECCC---CCEEEecCcCceecCCCCC---cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999876   8999999999987654322   22567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.+.   +..+.+..+.....  ........+|+++.++|.+||..||++|||++++++
T Consensus       264 l~G~~PF~~~---~~~~~~~~i~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          264 VDGEPPYFNE---PPLKAMKMIRDNLP--PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHSSCTTTTS---CHHHHHHHHHHSSC--CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHCCCCCCCc---CHHHHHHHHHcCCC--CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999873   34444444433221  122233578999999999999999999999999875

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.9e-51  Score=324.97  Aligned_cols=206  Identities=22%  Similarity=0.260  Sum_probs=171.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+++.+|+.++++++ ||||+++++++.+++..|+|||||+|+|.+++.. ...+++..+..++.|++.||.|||++||
T Consensus        56 ~~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ivmEy~~g~L~~~l~~-~~~l~e~~~~~~~~qi~~al~ylH~~~I  133 (275)
T 3hyh_A           56 MQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQ-RDKMSEQEARRFFQQIISAVEYCHRHKI  133 (275)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEEECCCEEHHHHHHH-SCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            3557899999999998 9999999999999999999999999999999985 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l~  167 (257)
                      +||||||+||+++.+   +.+||+|||++.......    ......||+.|+|||++.+..+ +.++||||+||++|+|+
T Consensus       134 iHRDiKP~NILl~~~---~~vkl~DFGla~~~~~~~----~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~ll  206 (275)
T 3hyh_A          134 VHRDLKPENLLLDEH---LNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML  206 (275)
T ss_dssp             CCCCCCTTTEEECTT---CCEEECCSSCC-------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHH
T ss_pred             ccccCChHHeEECCC---CCEEEeecCCCeecCCCC----ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHH
Confidence            999999999999876   899999999997654322    2245689999999999998876 57999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|+.||.+   .+.......+.......     +..+|+++.++|.+||+.||++|||++++++
T Consensus       207 tg~~PF~~---~~~~~~~~~i~~~~~~~-----p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          207 CRRLPFDD---ESIPVLFKNISNGVYTL-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HSSCSSCC---SSHHHHHHHHHHTCCCC-----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HCCCCCCC---CCHHHHHHHHHcCCCCC-----CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            99999986   34444555555444332     3678999999999999999999999999876

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.4e-51  Score=332.75  Aligned_cols=216  Identities=14%  Similarity=0.162  Sum_probs=183.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---------------cCCCCHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---------------SKRFSLKTVLML   72 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~~   72 (257)
                      ..+.|.+|+.++.+|+ ||||++++|++..++..++||||| +|+|.+++...               ...+++..+..+
T Consensus        72 ~~~~f~~E~~il~~l~-HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  150 (308)
T 4gt4_A           72 LREEFRHEAMLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL  150 (308)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHH
Confidence            4568999999999998 999999999999999999999999 99999999743               235899999999


Q ss_pred             HHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCC
Q psy2769          73 ADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP  152 (257)
Q Consensus        73 ~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  152 (257)
                      +.|++.||.|||+++|+||||||+||+++.+   +.+||+|||+++........ .......||+.|+|||++.+..++.
T Consensus       151 ~~qia~gl~yLH~~~iiHRDLK~~NILl~~~---~~~Ki~DFGlar~~~~~~~~-~~~~~~~gt~~ymAPE~l~~~~~s~  226 (308)
T 4gt4_A          151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDK---LNVKISDLGLFREVYAADYY-KLLGNSLLPIRWMAPEAIMYGKFSI  226 (308)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCSCCBCGGGGGGCB-CSSSSSCBCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCccccceEECCC---CCEEECCcccceeccCCCce-eEecccccCCcccCHHHHhCCCCCc
Confidence            9999999999999999999999999999877   89999999998765443221 1224567999999999999999999


Q ss_pred             cchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         153 RDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       153 ~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|||||||++|||+| |..||.+...   .+.+..+..+    ...+.+..+|+.+.+++.+||+.||++|||+.+|.+
T Consensus       227 ksDVwSfGvvl~El~t~g~~Pf~~~~~---~~~~~~i~~~----~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~  299 (308)
T 4gt4_A          227 DSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVVEMIRNR----QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHS  299 (308)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTCCH---HHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cchhhhHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHcC----CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999998 8999988543   3333333332    222334789999999999999999999999999999


Q ss_pred             HHHHH
Q psy2769         232 SFRNL  236 (257)
Q Consensus       232 ~l~~~  236 (257)
                      .|+++
T Consensus       300 ~L~a~  304 (308)
T 4gt4_A          300 RLRAW  304 (308)
T ss_dssp             HHHTS
T ss_pred             HHHhc
Confidence            98764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.7e-52  Score=335.70  Aligned_cols=221  Identities=19%  Similarity=0.261  Sum_probs=188.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh------------cCCCCHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC------------SKRFSLKTVLMLADQ   75 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~------------~~~~~~~~~~~~~~~   75 (257)
                      ..++|.+|+.++++|+ ||||+++++++.+++..++||||| +|+|.+++...            ...+++.++..++.|
T Consensus        58 ~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  136 (299)
T 4asz_A           58 ARKDFHREAELLTNLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ  136 (299)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence            3567999999999998 999999999999999999999999 99999999753            246999999999999


Q ss_pred             HHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcch
Q psy2769          76 MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDD  155 (257)
Q Consensus        76 i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D  155 (257)
                      ++.||.|||+++|+||||||+||+++.+   +.+||+|||+++......... ......||+.|+|||++.+..++.++|
T Consensus       137 ia~gl~yLH~~~iiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~-~~~~~~gt~~ymAPE~~~~~~~~~k~D  212 (299)
T 4asz_A          137 IAAGMVYLASQHFVHRDLATRNCLVGEN---LLVKIGDFGMSRDVYSTDYYR-VGGHTMLPIRWMPPESIMYRKFTTESD  212 (299)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCEE-ETTTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHhCCcccCccCHhhEEECCC---CcEEECCcccceecCCCCcee-ecCceecChhhcCHHHHcCCCCCchhh
Confidence            9999999999999999999999999877   899999999997654332111 113346899999999999999999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         156 LEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       156 v~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      ||||||++|||+| |+.||.+.+   ..+.+..+..+..    +..+..+|+.+.+++.+||+.||++|||++++.+.|+
T Consensus       213 VwS~Gvvl~Ellt~G~~Pf~~~~---~~~~~~~i~~~~~----~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~  285 (299)
T 4asz_A          213 VWSLGVVLWEIFTYGKQPWYQLS---NNEVIECITQGRV----LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ  285 (299)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSC---HHHHHHHHHHTCC----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHHcCCC----CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence            9999999999998 899999853   3344444444332    2234679999999999999999999999999999999


Q ss_pred             HHHHhcc
Q psy2769         235 NLLENKE  241 (257)
Q Consensus       235 ~~~~~~~  241 (257)
                      ++.+..+
T Consensus       286 ~~~~~~p  292 (299)
T 4asz_A          286 NLAKASP  292 (299)
T ss_dssp             HHHHHSC
T ss_pred             HHHhcCC
Confidence            9877554

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.1e-51  Score=333.82  Aligned_cols=219  Identities=21%  Similarity=0.239  Sum_probs=184.0

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHR   91 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~   91 (257)
                      ..+|+.++..|. ||||+++++++.+++.+|+||||| ||+|.+++.. .+.+++..+..++.|++.||.|||++||+||
T Consensus        97 ~~~E~~il~~l~-HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHR  174 (336)
T 4g3f_A           97 RVEELVACAGLS-SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ-MGCLPEDRALYYLGQALEGLEYLHTRRILHG  174 (336)
T ss_dssp             CTHHHHTTTTCC-CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTTEECS
T ss_pred             HHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence            457999999998 999999999999999999999999 9999999985 5679999999999999999999999999999


Q ss_pred             CCCCCceEeeccCCCC-eEEEEeCCcceecCCCCCCC--CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          92 DIKPDNFLMGVRENFN-TVYLVDFGLAVDFCPNCPPR--IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        92 dl~~~nili~~~~~~~-~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      ||||+|||++.+   + .+||+|||++..+.......  .......||+.|+|||++.+..++.++|||||||++|||++
T Consensus       175 DlKp~NILl~~~---g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt  251 (336)
T 4g3f_A          175 DVKADNVLLSSD---GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN  251 (336)
T ss_dssp             CCCGGGEEECTT---SCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             ccCHHHEEEeCC---CCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH
Confidence            999999999865   5 69999999998765432111  11134579999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |..||.+.......   ..+....  ......++.+|+.+.++|.+||+.||++|||+.++++.+...+...+
T Consensus       252 G~~Pf~~~~~~~~~---~~i~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~  319 (336)
T 4g3f_A          252 GCHPWTQYFRGPLC---LKIASEP--PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG  319 (336)
T ss_dssp             SSCSSTTTCCSCCH---HHHHHSC--CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred             CcCCCCCCCHHHHH---HHHHcCC--CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence            99999876544432   2233222  22334557899999999999999999999999999999999988765

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.6e-52  Score=335.25  Aligned_cols=226  Identities=22%  Similarity=0.304  Sum_probs=180.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..++.+|+.++.++. ||||+++++++.+++.+|+||||| ||+|.+++.. .+.+++.++..++.|++.||.|||++||
T Consensus        70 ~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~aL~ylH~~~I  147 (304)
T 3ubd_A           70 RVRTKMERDILVEVN-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGI  147 (304)
T ss_dssp             CC------CCCCCCC-CTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            456889999999998 999999999999999999999999 9999999985 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.+||+|||+++.......   ......||+.|+|||++.+..++.++||||+||++|+|++
T Consensus       148 iHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~~---~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt  221 (304)
T 3ubd_A          148 IYRDLKPENILLDEE---GHIKLTDFGLSKESIDHEK---KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT  221 (304)
T ss_dssp             CCSSCCGGGEEECTT---SCEEEESSEEEEC-----C---CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCHHHeEEcCC---CCEEecccccceeccCCCc---cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHh
Confidence            999999999999876   8999999999976543321   2255789999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLR  248 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~~~  248 (257)
                      |..||.+.   +..+.+..+.......     +..+|+++.++|++||+.||++|||+..  +.++++++    ..+-..
T Consensus       222 G~~PF~~~---~~~~~~~~i~~~~~~~-----p~~~s~~~~~li~~~L~~dP~~R~ta~~--~~~~eil~----Hp~f~~  287 (304)
T 3ubd_A          222 GTLPFQGK---DRKETMTMILKAKLGM-----PQFLSPEAQSLLRMLFKRNPANRLGAGP--DGVEEIKR----HSFFST  287 (304)
T ss_dssp             SSCSSCCS---SHHHHHHHHHHCCCCC-----CTTSCHHHHHHHHHHTCSSGGGSTTCST--TTHHHHHT----SGGGTT
T ss_pred             CCCCCCCc---CHHHHHHHHHcCCCCC-----CCcCCHHHHHHHHHHcccCHHHCCCCCc--CCHHHHHc----CccccC
Confidence            99999873   4444555555443332     3679999999999999999999998632  11222222    224455


Q ss_pred             ccccccccC
Q psy2769         249 YDWTLLERK  257 (257)
Q Consensus       249 ~~~~~~~~~  257 (257)
                      +||+.|++|
T Consensus       288 idw~~l~~~  296 (304)
T 3ubd_A          288 IDWNKLYRR  296 (304)
T ss_dssp             CCHHHHHTT
T ss_pred             CCHHHHHhC
Confidence            788887654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.9e-51  Score=334.91  Aligned_cols=220  Identities=18%  Similarity=0.257  Sum_probs=180.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh--------------cCCCCHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC--------------SKRFSLKTVLMLA   73 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~--------------~~~~~~~~~~~~~   73 (257)
                      ..++|.+|+.++.+|+ ||||+++++++.++...|+||||| +|+|.+++...              ...+++.++..++
T Consensus        86 ~~~~f~~E~~il~~l~-HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  164 (329)
T 4aoj_A           86 ARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA  164 (329)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence            4567999999999998 999999999999999999999999 99999999743              2358999999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.|||+.+|+||||||+||+++.+   +.+||+|||+++......... ......||+.|+|||++.+..++.+
T Consensus       165 ~qia~gl~yLH~~~iiHRDLKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~-~~~~~~gt~~ymAPE~~~~~~~~~~  240 (329)
T 4aoj_A          165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQG---LVVKIGDFGMSRDIYSTDYYR-VGGRTMLPIRWMPPESILYRKFTTE  240 (329)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEEETT---TEEEECCCC-----------------CCCCGGGCCHHHHTTCCCCHH
T ss_pred             HHHHHHHHHHhcCCeecccccHhhEEECCC---CcEEEcccccceeccCCCcce-ecCcccccccccChhhhcCCCCCcc
Confidence            999999999999999999999999999876   899999999997654432221 1144578999999999999999999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +|||||||++|||+| |+.||....   ..+.+..+..+.    ..+.+..+|+.+.+++.+||+.||++|||++++++.
T Consensus       241 sDvwS~Gvvl~Ellt~G~~Pf~~~~---~~~~~~~i~~g~----~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          241 SDVWSFGVVLWEIFTYGKQPWYQLS---NTEAIDCITQGR----ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTCSSC---HHHHHHHHHHTC----CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             ccccchHHHHHHHHcCCCCCCCCCC---HHHHHHHHHcCC----CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            999999999999998 899998854   333444444432    223346799999999999999999999999999999


Q ss_pred             HHHHHHhc
Q psy2769         233 FRNLLENK  240 (257)
Q Consensus       233 l~~~~~~~  240 (257)
                      |+.+.+..
T Consensus       314 L~~l~~~p  321 (329)
T 4aoj_A          314 LQALAQAP  321 (329)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHhhCC
Confidence            99987754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.9e-50  Score=336.75  Aligned_cols=210  Identities=21%  Similarity=0.291  Sum_probs=181.0

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++.|+ ||||++++++|.+++.+|+||||| ||+|.+++.  ...+++..+..++.|++.||.|||++
T Consensus       190 ~~~~~~~~Ei~il~~l~-HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~--~~~l~e~~~~~~~~qil~aL~ylH~~  266 (423)
T 4fie_A          190 QRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT--HTRMNEEQIAAVCLAVLQALSVLHAQ  266 (423)
T ss_dssp             SSGGGHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhCC-CCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45667999999999998 999999999999999999999999 999999998  45799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+|||++.+   +.+||+|||++..+.....   .....+||+.|+|||++.+..++.++|||||||++|||
T Consensus       267 ~IiHRDiKp~NILl~~~---g~vKl~DFGla~~~~~~~~---~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem  340 (423)
T 4fie_A          267 GVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVP---RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM  340 (423)
T ss_dssp             TEECCCCSTTTEEECTT---CCEEECCCTTCEECCSSCC---CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CeecccCCHHHEEEcCC---CCEEEecCccceECCCCCc---cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999876   8999999999987654322   22567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.+.   +..+.+..+.....  ........+|+.+.+||.+||..||++|||++++++
T Consensus       341 l~G~~PF~~~---~~~~~~~~i~~~~~--~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          341 VDGEPPYFNE---PPLKAMKMIRDNLP--PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHSSCTTTTS---CHHHHHHHHHHSCC--CCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHCCCCCCCc---CHHHHHHHHHcCCC--CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999873   34444444433211  122233678999999999999999999999999876

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.6e-51  Score=335.93  Aligned_cols=209  Identities=19%  Similarity=0.185  Sum_probs=180.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+++.+|+.++++|+ ||||+++++++.+++.+|+||||| ||+|.+++... ...+++..+..++.|++.||.|||++
T Consensus        66 ~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~  144 (350)
T 4b9d_A           66 EREESRREVAVLANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR  144 (350)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567999999999998 999999999999999999999999 99999999854 44679999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+|||++.+   +.+||+|||+++......   .......||+.|+|||++.+..++.++|||||||++|+|
T Consensus       145 ~IiHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~---~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyem  218 (350)
T 4b9d_A          145 KILHRDIKSQNIFLTKD---GTVQLGDFGIARVLNSTV---ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL  218 (350)
T ss_dssp             TCEETTCCGGGEEECTT---CCEEECSTTEESCCCHHH---HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CeeeccCCHHHEEECCC---CCEEEcccccceeecCCc---ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999876   899999999997653321   111345799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|+.||.+.   +..+.+..+.....+    .....+|+++.++|.+||+.||++|||++++++
T Consensus       219 ltG~~PF~~~---~~~~~~~~i~~~~~~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          219 CTLKHAFEAG---SMKNLVLKIISGSFP----PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHSSCSCCCS---SHHHHHHHHHHTCCC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHCCCCCCCc---CHHHHHHHHHcCCCC----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999873   444445555544322    234678999999999999999999999999975

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.8e-50  Score=329.22  Aligned_cols=221  Identities=21%  Similarity=0.272  Sum_probs=184.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHh---------------cCCCCHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYC---------------SKRFSLKTVLML   72 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~~   72 (257)
                      .+.+.+|+.++.++.+||||++++++|.. +..+++||||| +|+|.++++..               ...+++..+..+
T Consensus       111 ~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  190 (353)
T 4ase_A          111 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY  190 (353)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHH
Confidence            45789999999999967999999999865 45789999999 99999999853               234889999999


Q ss_pred             HHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCC
Q psy2769          73 ADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP  152 (257)
Q Consensus        73 ~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  152 (257)
                      +.|++.||.|||+++|+||||||+||+++.+   +.+||+|||+++....... ........||+.|+|||++.+..++.
T Consensus       191 ~~qia~gl~yLH~~~iiHRDLK~~NILl~~~---~~vKi~DFGlar~~~~~~~-~~~~~~~~gt~~ymAPE~l~~~~y~~  266 (353)
T 4ase_A          191 SFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPD-YVRKGDARLPLKWMAPETIFDRVYTI  266 (353)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCGGGSCTTTCTT-SEEETTEEECGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHhHhhCCeecCccCccceeeCCC---CCEEECcchhhhhcccCCC-ceeeccccccccccCHHHHhcCCCCC
Confidence            9999999999999999999999999999877   8999999999986644322 12224456899999999999999999


Q ss_pred             cchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         153 RDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       153 ~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|||||||++|||+| |..||.+......  ....+..+    ..+..+..+|+++.+++.+||+.||++|||+.++++
T Consensus       267 ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~--~~~~i~~g----~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~  340 (353)
T 4ase_A          267 QSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKEG----TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE  340 (353)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCSSTTCCCSHH--HHHHHHHT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cccEeehHHHHHHHHhCCCCCCCCCCHHHH--HHHHHHcC----CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            9999999999999998 9999988654322  22222222    122334678999999999999999999999999999


Q ss_pred             HHHHHHHhc
Q psy2769         232 SFRNLLENK  240 (257)
Q Consensus       232 ~l~~~~~~~  240 (257)
                      .|+++++.+
T Consensus       341 ~L~~llq~~  349 (353)
T 4ase_A          341 HLGNLLQAN  349 (353)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            999998755

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=7.6e-50  Score=319.40  Aligned_cols=208  Identities=21%  Similarity=0.284  Sum_probs=173.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ..+++.+|+.++++|+ ||||+++++++.+    +..+|+||||| ||+|.+++.. ...+++..+..++.|++.||.||
T Consensus        68 ~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~yl  145 (290)
T 3fpq_A           68 ERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFL  145 (290)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Confidence            3567999999999998 9999999999865    34689999999 9999999985 56799999999999999999999


Q ss_pred             HhCC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHH
Q psy2769          84 HRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY  161 (257)
Q Consensus        84 h~~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~  161 (257)
                      |++|  |+||||||+||+++.  .++.+||+|||++......     ......||+.|+|||++.+ .++.++|||||||
T Consensus       146 H~~~~~IiHRDlKp~NILl~~--~~g~vKl~DFGla~~~~~~-----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGv  217 (290)
T 3fpq_A          146 HTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS-----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGM  217 (290)
T ss_dssp             HTSSSCCCCCCCCGGGEEESS--TTSCEEECCTTGGGGCCTT-----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHH
T ss_pred             HHCCCCEEecccChhheeEEC--CCCCEEEEeCcCCEeCCCC-----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHH
Confidence            9999  999999999999973  2378999999999753221     2255689999999999876 6899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|||++|+.||.+...  .......+..   ...+......+++++.++|.+||+.||++|||++++++
T Consensus       218 ilyelltg~~Pf~~~~~--~~~~~~~i~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          218 CMLEMATSEYPYSECQN--AAQIYRRVTS---GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHSSCTTTTCSS--HHHHHHHHTT---TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHCCCCCCCCCc--HHHHHHHHHc---CCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999986433  2222233322   22334455778899999999999999999999999875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.9e-47  Score=308.92  Aligned_cols=253  Identities=43%  Similarity=0.770  Sum_probs=220.9

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ||+.......+.+.+|+.++..+.+|++++++++++......++|||+++++|.+++......+++..+..++.|++.||
T Consensus        40 vK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l  119 (298)
T 1csn_A           40 IKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV  119 (298)
T ss_dssp             EEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             EEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence            35555556667899999999999779999999999999999999999999999999997666799999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccC--CCCeEEEEeCCcceecCCCCCCC----CCccCCCCcccccChhHhcCCCCCCcc
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRE--NFNTVYLVDFGLAVDFCPNCPPR----IRTRGLTGTARYASVNAHQWLDQSPRD  154 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~--~~~~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~  154 (257)
                      .+||+.|++|+||||+||+++.+.  ..+.++|+|||++..........    .......|++.|+|||.+.+..++.++
T Consensus       120 ~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  199 (298)
T 1csn_A          120 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRD  199 (298)
T ss_dssp             HHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHH
T ss_pred             HHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHH
Confidence            999999999999999999998652  22349999999998765543211    112456799999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      ||||||+++|+|++|..||...........+..+.........+.....+|+.+.+++.+||+.||++||+++++.+.|+
T Consensus       200 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~  279 (298)
T 1csn_A          200 DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS  279 (298)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence            99999999999999999999987777777777777777777777777899999999999999999999999999999999


Q ss_pred             HHHHhccccCCCCCcccccc
Q psy2769         235 NLLENKERCEFDLRYDWTLL  254 (257)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~  254 (257)
                      +++++.+ ...+.++||+.|
T Consensus       280 ~~~~~~~-~~~~~~~dw~~l  298 (298)
T 1csn_A          280 KVLERLN-TTEDENFDWNLL  298 (298)
T ss_dssp             HHHHHTT-CCSCSCCGGGCC
T ss_pred             HHHHhcC-CCCCCccccCCC
Confidence            9999888 778899999864

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=8.4e-47  Score=309.65  Aligned_cols=248  Identities=46%  Similarity=0.833  Sum_probs=217.5

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ||+.......+.+.+|+.+++++.+||||+++++++......++|||+++++|.+++......+++..+..++.|++.||
T Consensus        39 vK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l  118 (330)
T 2izr_A           39 IKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRM  118 (330)
T ss_dssp             EEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             EEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            35555555667899999999999669999999999999999999999999999999997667899999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCe-----EEEEeCCcceecCCCCCCC----CCccCCCCcccccChhHhcCCCCC
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNT-----VYLVDFGLAVDFCPNCPPR----IRTRGLTGTARYASVNAHQWLDQS  151 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~-----~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~  151 (257)
                      .|||+.|++||||||+||+++.+   +.     ++|+|||++..........    .......||+.|+|||.+.+..++
T Consensus       119 ~~LH~~~iiHrDlkp~Nill~~~---~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  195 (330)
T 2izr_A          119 EYVHSKNLIYRDVKPENFLIGRP---GNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQS  195 (330)
T ss_dssp             HHHHHTTEECCCCCGGGEEECCG---GGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC
T ss_pred             HHHHhCCeeccCCCHHHeeeccC---CCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCC
Confidence            99999999999999999999876   44     9999999998764432211    112456799999999999999999


Q ss_pred             CcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         152 PRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .++||||||+++|+|++|..||......+..+.+..+...............+| .+.+++..||+.||.+||+++++.+
T Consensus       196 ~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          196 RRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             chhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            999999999999999999999999877777777888877777777776667778 8999999999999999999999999


Q ss_pred             HHHHHHHhccccCCCCCccccc
Q psy2769         232 SFRNLLENKERCEFDLRYDWTL  253 (257)
Q Consensus       232 ~l~~~~~~~~~~~~~~~~~~~~  253 (257)
                      .|+++.++.+ ...+..+||+.
T Consensus       275 ~l~~~~~~~~-~~~~~~~dw~~  295 (330)
T 2izr_A          275 LFTDLFDRKG-YMFDYEYDWIG  295 (330)
T ss_dssp             HHHHHHHHTT-CCCSCCCTTTT
T ss_pred             HHHHHHHHcC-CCCCCCccCCC
Confidence            9999999988 88888999984

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=5.5e-47  Score=305.90  Aligned_cols=253  Identities=48%  Similarity=0.911  Sum_probs=214.6

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      |+.......+.+.+|+.++..+.++++++.+..++......+++||+++++|.+++......+++..+..++.|++.||.
T Consensus        40 K~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~  119 (296)
T 4hgt_A           40 KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIE  119 (296)
T ss_dssp             EEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             EeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            44445556678999999999999566677777777788889999999999999999876778999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC----CCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR----IRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      |||+.|++|+||||+||+++.+...+.++|+|||++..........    .......+++.|+|||.+.+..++.++|||
T Consensus       120 ~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  199 (296)
T 4hgt_A          120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  199 (296)
T ss_dssp             HHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHH
T ss_pred             HHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHH
Confidence            9999999999999999999533344889999999998765543211    122456799999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      |||+++|+|++|..||...........+..+.........+.....+|+.+.+++..||+.||++||+++++++.|++++
T Consensus       200 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          200 SLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999876665555566666667777777777889999999999999999999999999999999999


Q ss_pred             HhccccCCCCCccccccc
Q psy2769         238 ENKERCEFDLRYDWTLLE  255 (257)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~  255 (257)
                      ...+ .+.+..+||+.++
T Consensus       280 ~~~~-~~~~~~~dw~~~~  296 (296)
T 4hgt_A          280 HRQG-FSYDYVFDWNMLK  296 (296)
T ss_dssp             HHHT-CCTTCCCGGGGCC
T ss_pred             HHhC-CCccCccchhhcC
Confidence            9998 8899999999875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.6e-46  Score=303.29  Aligned_cols=253  Identities=48%  Similarity=0.911  Sum_probs=214.3

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      |+.......+.+.+|+.++..+.++++++.+..++......++|||+++++|.+++......+++..+..++.|++.||.
T Consensus        40 K~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~  119 (296)
T 3uzp_A           40 KLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIE  119 (296)
T ss_dssp             EEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             EEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHH
Confidence            44444556678999999999999555677776666778889999999999999999866778999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC----CCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR----IRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      |||++|++|+||||+||+++.+...+.++|+|||++..........    .......+++.|+|||.+.+..++.++|||
T Consensus       120 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  199 (296)
T 3uzp_A          120 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLE  199 (296)
T ss_dssp             HHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             HHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhH
Confidence            9999999999999999999643344889999999998765543211    112456799999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      |||+++|+|++|..||...........+..+.........+.....+|+.+.+++.+||+.||++||+++++++.|+++.
T Consensus       200 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          200 SLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence            99999999999999999866555555556666666666777777889999999999999999999999999999999999


Q ss_pred             HhccccCCCCCccccccc
Q psy2769         238 ENKERCEFDLRYDWTLLE  255 (257)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~  255 (257)
                      ...+ ...+..+||+.+.
T Consensus       280 ~~~~-~~~~~~~dw~~~~  296 (296)
T 3uzp_A          280 HRQG-FSYDYVFDWNMLK  296 (296)
T ss_dssp             HHTT-CCSSCCCGGGGCC
T ss_pred             HhcC-CcccccccccccC
Confidence            9998 8889999999874

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=2.1e-45  Score=314.17  Aligned_cols=255  Identities=50%  Similarity=0.948  Sum_probs=224.3

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ||+.......+.+.+|+.++..|.++++++.+..++......++||||++++|.+++......+++..+..++.||+.||
T Consensus        37 vK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL  116 (483)
T 3sv0_A           37 IKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV  116 (483)
T ss_dssp             EEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             EEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence            35555556667899999999999977889999888888889999999999999999997677899999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC----CCccCCCCcccccChhHhcCCCCCCcchH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR----IRTRGLTGTARYASVNAHQWLDQSPRDDL  156 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv  156 (257)
                      .|||++||+|+||||+||+++.+...+.++|+|||++..........    .......|++.|+|||.+.+..++.++||
T Consensus       117 ~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDv  196 (483)
T 3sv0_A          117 EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDL  196 (483)
T ss_dssp             HHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred             HHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHH
Confidence            99999999999999999999643344899999999998765543211    11135679999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      ||||+++|+|++|..||...........+..+...............+|+.+.+++..||+.+|++||+++++.+.|+++
T Consensus       197 wSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          197 ESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             HHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            99999999999999999998887777888888887777777888889999999999999999999999999999999999


Q ss_pred             HHhccccCCCCCcccccccc
Q psy2769         237 LENKERCEFDLRYDWTLLER  256 (257)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~  256 (257)
                      +...+ ..++..+||+.++.
T Consensus       277 ~~~~~-~~~~~~~dW~~~~~  295 (483)
T 3sv0_A          277 FIREG-FQFDYVFDWTILKY  295 (483)
T ss_dssp             HHHTT-CCCSSCCHHHHHTC
T ss_pred             HHHcC-CCccCCcCchhhcc
Confidence            99888 99999999998764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=5.9e-47  Score=304.96  Aligned_cols=210  Identities=20%  Similarity=0.249  Sum_probs=158.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------------ccEEEEecc-CCCHHHHHHHhc--CCCCHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------------YNILVMELL-GPSLEDLFQYCS--KRFSLKTVLMLA   73 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------------~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~   73 (257)
                      ..+++.+|+.++++|. ||||+++++++.+.+            .+|+||||| +++|.+++....  ...+...+..++
T Consensus        46 ~~~~~~~E~~il~~l~-HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~  124 (299)
T 4g31_A           46 AREKVMREVKALAKLE-HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF  124 (299)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHH
Confidence            3567899999999998 999999999987543            379999999 999999998531  234566789999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC---------CCccCCCCcccccChhH
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR---------IRTRGLTGTARYASVNA  144 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~  144 (257)
                      .|++.||.|||++||+||||||+||+++.+   +.+||+|||+++.........         .......||+.|+|||+
T Consensus       125 ~qi~~al~ylH~~~IiHRDlKp~NILl~~~---~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~  201 (299)
T 4g31_A          125 LQIAEAVEFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQ  201 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCGGGEEECTT---CCEEECCCCCC--------------------------CCCTTSCHHH
T ss_pred             HHHHHHHHHHHHCcCccccCcHHHeEECCC---CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHH
Confidence            999999999999999999999999999876   899999999998765432111         11134579999999999


Q ss_pred             hcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       145 ~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      +.+..++.++|||||||++|||++   ||...  .+....+..+.    ....++.....++...++|.+||+.||++||
T Consensus       202 ~~~~~y~~~~DiwSlGvilyell~---Pf~~~--~~~~~~~~~~~----~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rp  272 (299)
T 4g31_A          202 IHGNSYSHKVDIFSLGLILFELLY---PFSTQ--MERVRTLTDVR----NLKFPPLFTQKYPCEYVMVQDMLSPSPMERP  272 (299)
T ss_dssp             HTTCCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHHHHHHH----TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSC
T ss_pred             HcCCCCCCHHHHHHHHHHHHHHcc---CCCCc--cHHHHHHHHHh----cCCCCCCCcccCHHHHHHHHHHcCCChhHCc
Confidence            999999999999999999999995   77641  11112222221    2222333345567788999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      |+.++++
T Consensus       273 s~~eil~  279 (299)
T 4g31_A          273 EAINIIE  279 (299)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9999865

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-46  Score=310.63  Aligned_cols=214  Identities=17%  Similarity=0.200  Sum_probs=174.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee------CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS------GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+++.+|+.+++.|. ||||+++++++..      .+.+|+|||||+|+|.+++.. .+.+++..+..++.|++.||.||
T Consensus        97 ~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~-~~~l~~~~~~~~~~qil~al~yl  174 (398)
T 4b99_A           97 AKRTLRELKILKHFK-HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHS-SQPLTLEHVRYFLYQLLRGLKYM  174 (398)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEECCCSSCTTTCCCEEEEEECCSEEHHHHHTS-SSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCcceEeeeeecccccccCCEEEEEEeCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Confidence            456889999999998 9999999998764      357899999998889999874 66899999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-CCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-PRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCY  161 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~  161 (257)
                      |++||+||||||+||+++.+   +.+||+|||++..+..... .........||+.|+|||++.+.. ++.++||||+||
T Consensus       175 H~~~iiHRDlKP~NIl~~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~  251 (398)
T 4b99_A          175 HSAQVIHRDLKPSNLLVNEN---CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGC  251 (398)
T ss_dssp             HHTTCBCCCCCGGGEEECTT---CCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             HHCcCcCCCcCccccccCCC---CCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHH
Confidence            99999999999999999876   8999999999986644321 122235678999999999998764 589999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhC--------------------------ChhhhhcCCcHHHHHHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTM--------------------------TPEAICEGTPPEFAEFLRYC  215 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~li~~~  215 (257)
                      ++|||++|.+||.+.   +....+..+.......                          ......+.+++++.+||.+|
T Consensus       252 il~ell~G~~pF~g~---~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~m  328 (398)
T 4b99_A          252 IFGEMLARRQLFPGK---NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRM  328 (398)
T ss_dssp             HHHHHHHTSCSSCCS---SHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCC---CHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHH
Confidence            999999999999874   3334444443332211                          12233456889999999999


Q ss_pred             hcCCCCCCCChHHHHH
Q psy2769         216 RGLAFSEEPNYGKLRD  231 (257)
Q Consensus       216 l~~~p~~Rp~~~~~~~  231 (257)
                      |..||++|||++++++
T Consensus       329 L~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          329 LRFEPSARISAAAALR  344 (398)
T ss_dssp             SCSSTTTSCCHHHHTT
T ss_pred             CcCChhHCcCHHHHhc
Confidence            9999999999999876

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.5e-46  Score=306.40  Aligned_cols=222  Identities=21%  Similarity=0.209  Sum_probs=172.5

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      |.........++.+|+.+++.+.+||||+++++++.+.+++|+||||+ +++|.+++.    .+++.++..++.|++.||
T Consensus        55 K~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al  130 (361)
T 4f9c_A           55 KHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKAL  130 (361)
T ss_dssp             EEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHH
T ss_pred             EEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHH
Confidence            333334445678999999999988999999999999999999999999 999999885    589999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-------------------------CCCCccCCCC
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-------------------------PRIRTRGLTG  135 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-------------------------~~~~~~~~~~  135 (257)
                      .|||++||+||||||+||+++.+  .+.+||+|||+++.......                         ........+|
T Consensus       131 ~ylH~~gIiHRDiKPeNiLl~~~--~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  208 (361)
T 4f9c_A          131 KRIHQFGIVHRDVKPSNFLYNRR--LKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAG  208 (361)
T ss_dssp             HHHHHTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCC
T ss_pred             HHHHHCCeEeCcCCHHHeEEeCC--CCeEEECcCCCCcccCCcccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999999743  36899999999976543211                         0111234579


Q ss_pred             cccccChhHhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh--------------------
Q psy2769         136 TARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT--------------------  194 (257)
Q Consensus       136 ~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------  194 (257)
                      |+.|+|||++.+.. ++.++||||+||++|+|++|+.||....+  ....+..+......                    
T Consensus       209 T~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~--~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~  286 (361)
T 4f9c_A          209 TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD--DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEV  286 (361)
T ss_dssp             CGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS--HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCC
T ss_pred             CccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC--HHHHHHHHHHhcCCccchhhhhhccccccccccC
Confidence            99999999998764 78999999999999999999999976433  22222222111000                    


Q ss_pred             -----------------------------CChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         195 -----------------------------MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       195 -----------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                                                   .........+|+++.+||++||..||++|||++++++
T Consensus       287 p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          287 PAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             CCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             cchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                         0001123467899999999999999999999998864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.6e-47  Score=306.80  Aligned_cols=221  Identities=20%  Similarity=0.169  Sum_probs=163.9

Q ss_pred             HHHHHHHHhcCCCCCcEEEeeeeeCC----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q psy2769          15 WERNFYEKLHGAPGVPHVMGYGTSGD----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK---   86 (257)
Q Consensus        15 ~E~~~~~~l~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---   86 (257)
                      .|+..+.+++ ||||+++++++..++    .+|+||||| +|+|.+++.  ...++++.+.+++.|++.||+|||+.   
T Consensus        46 ~Ei~~~~~l~-HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~--~~~l~~~~~~~i~~~ia~gl~ylH~~~~~  122 (303)
T 3hmm_A           46 AEIYQTVMLR-HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHLHMEIVG  122 (303)
T ss_dssp             HHHHTSTTCC-CTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHHCCBCS
T ss_pred             HHHHHHhcCC-CCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            4555556777 999999999998653    579999999 999999998  45799999999999999999999977   


Q ss_pred             -----CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-CCCccCCCCcccccChhHhcCC------CCCCcc
Q psy2769          87 -----KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLTGTARYASVNAHQWL------DQSPRD  154 (257)
Q Consensus        87 -----~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~------~~~~~~  154 (257)
                           +|+||||||+|||++.+   +.+||+|||++......... ........||+.|+|||++.+.      .++.++
T Consensus       123 ~~~~~~IiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~  199 (303)
T 3hmm_A          123 TQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA  199 (303)
T ss_dssp             TTCBCCEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHH
T ss_pred             ccCCCCEeeccCCcccEEECCC---CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhH
Confidence                 99999999999999876   89999999998766443221 1112345799999999999765      256789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCC----------CCc--cHHHHHHHHHHHHhhCChhhhhc--CCcHHHHHHHHHHhcCCC
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSI----------KSD--NEETRMQRVTEMKLTMTPEAICE--GTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p  220 (257)
                      |||||||++|||+||..||...          ...  ........+.........+....  .+++.+.+++.+||+.||
T Consensus       200 DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP  279 (303)
T 3hmm_A          200 DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG  279 (303)
T ss_dssp             HHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSG
T ss_pred             hhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCH
Confidence            9999999999999997665432          111  11222221211111111111111  234578999999999999


Q ss_pred             CCCCChHHHHHHHHHHHHhcc
Q psy2769         221 SEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       221 ~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      ++|||+.++++.|+++.++.+
T Consensus       280 ~~RPt~~ei~~~L~~l~~~~~  300 (303)
T 3hmm_A          280 AARLTALRIKKTLSQLSQQEG  300 (303)
T ss_dssp             GGSCCHHHHHHHHHHHHHC--
T ss_pred             hHCcCHHHHHHHHHHHHHHcC
Confidence            999999999999999887665

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.6e-45  Score=319.15  Aligned_cols=221  Identities=22%  Similarity=0.298  Sum_probs=179.3

Q ss_pred             cccHHHHHHHHHhc--CCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          11 QRLFWERNFYEKLH--GAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        11 ~~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+|..++..+.  +||||++++++|.+.+.+|+||||| ||+|.+++.. ...+++..+..++.||+.||.|||++|
T Consensus       234 ~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~-~~~l~E~~a~~y~~qIl~aL~yLH~~g  312 (689)
T 3v5w_A          234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRF  312 (689)
T ss_dssp             HHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34555655554443  4999999999999999999999999 9999999985 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l  166 (257)
                      |+||||||+|||++.+   |.+||+|||++..+....     ....+||+.|+|||++.+ ..++.++|+|||||++|+|
T Consensus       313 IiHRDLKPeNILld~~---G~vKL~DFGlA~~~~~~~-----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEm  384 (689)
T 3v5w_A          313 VVYRDLKPANILLDEH---GHVRISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL  384 (689)
T ss_dssp             EECCCCSGGGEEECTT---SCEEECCCTTCEECSSCC-----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHH
T ss_pred             ccccCCchHHeEEeCC---CCEEecccceeeecCCCC-----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence            9999999999999876   899999999998765432     256789999999999964 5789999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh-----HHHHHHHHHHHHhcc
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY-----GKLRDSFRNLLENKE  241 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~-----~~~~~~l~~~~~~~~  241 (257)
                      ++|.+||.+....+.......+.....     ..+..+|+++.+||.+||..||.+|++.     ++++        ++ 
T Consensus       385 LtG~~PF~~~~~~~~~~i~~~i~~~~~-----~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~--------~H-  450 (689)
T 3v5w_A          385 LRGHSPFRQHKTKDKHEIDRMTLTMAV-----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK--------ES-  450 (689)
T ss_dssp             HHSSCTTCGGGCCCHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT--------TS-
T ss_pred             HhCCCCCCCCChHHHHHHHHhhcCCCC-----CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh--------cC-
Confidence            999999987655554444444333322     2336799999999999999999999984     4432        22 


Q ss_pred             ccCCCCCcccccccc
Q psy2769         242 RCEFDLRYDWTLLER  256 (257)
Q Consensus       242 ~~~~~~~~~~~~~~~  256 (257)
                        .+-..+||+.|++
T Consensus       451 --pfF~~idW~~l~~  463 (689)
T 3v5w_A          451 --PFFRSLDWQMVFL  463 (689)
T ss_dssp             --GGGTTCCHHHHHT
T ss_pred             --ccccCCCHHHHHc
Confidence              2455577776654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2.1e-44  Score=299.23  Aligned_cols=240  Identities=33%  Similarity=0.574  Sum_probs=190.0

Q ss_pred             ccHHHHHHHHHhcC--------------CCCCcEEEeeeeeC----CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHH
Q psy2769          12 RLFWERNFYEKLHG--------------APGVPHVMGYGTSG----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLA   73 (257)
Q Consensus        12 ~~~~E~~~~~~l~~--------------~~~i~~~~~~~~~~----~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~   73 (257)
                      .+.+|+.++.++..              ||||+++++++...    ...++||||++++|.+++......+++..+..++
T Consensus        79 ~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~  158 (364)
T 3op5_A           79 PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLS  158 (364)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHH
T ss_pred             hHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHH
Confidence            45667777666654              89999999998764    4589999999999999998766789999999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC----CCccCCCCcccccChhHhcCCC
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR----IRTRGLTGTARYASVNAHQWLD  149 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~----~~~~~~~~~~~~~aPE~~~~~~  149 (257)
                      .|++.||.|||+.|++||||||+||+++.+ ..+.++|+|||++..........    .......||+.|+|||.+.+..
T Consensus       159 ~qi~~~l~~lH~~~iiHrDlkp~Nill~~~-~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  237 (364)
T 3op5_A          159 LRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVA  237 (364)
T ss_dssp             HHHHHHHHHHHHTTEECCCCCGGGEEEESS-CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCC
T ss_pred             HHHHHHHHHHHHCCeEEecCCHHHEEEecC-CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCC
Confidence            999999999999999999999999999832 23889999999997765432111    1113445999999999999999


Q ss_pred             CCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhh------cCCcHHHHHHHHHHhcCCCCCC
Q psy2769         150 QSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAIC------EGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       150 ~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      ++.++||||||+++|+|++|..||..............   ...........      ..+|+.+.+++..||+.+|++|
T Consensus       238 ~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  314 (364)
T 3op5_A          238 PSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSK---IRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEK  314 (364)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHH---HHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCC
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHH---HHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCC
Confidence            99999999999999999999999997443322211111   11111111111      5779999999999999999999


Q ss_pred             CChHHHHHHHHHHHHhccccCCCCCcccccccc
Q psy2769         224 PNYGKLRDSFRNLLENKERCEFDLRYDWTLLER  256 (257)
Q Consensus       224 p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  256 (257)
                      |+++++.+.|+++++..+ ...+..+||+.+++
T Consensus       315 P~~~~l~~~l~~~~~~~~-~~~~~~~dw~~~~~  346 (364)
T 3op5_A          315 PLYENLRDILLQGLKAIG-SKDDGKLDLSVVEN  346 (364)
T ss_dssp             CCHHHHHHHHHHHHHHTT-CCCCCCCCC-----
T ss_pred             CCHHHHHHHHHHHHHHcC-CCcCCccceEeccC
Confidence            999999999999999988 88999999998764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.2e-45  Score=320.00  Aligned_cols=213  Identities=18%  Similarity=0.247  Sum_probs=183.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.|+ ||||++++++|.++..+|+||||| ||+|.+++......+++..+..++.||+.||.|||++|
T Consensus       197 ~~~~~~~Ei~il~~l~-hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~  275 (573)
T 3uto_A          197 DKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN  275 (573)
T ss_dssp             HHHHHHHHHHHHHHTC-CTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3567889999999998 999999999999999999999999 99999999755667999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+||||||+||+++.+ ..+.+||+|||++..+....    ......||+.|+|||++.+..++.++||||+||++|+|+
T Consensus       276 iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~~~~----~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml  350 (573)
T 3uto_A          276 YVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL  350 (573)
T ss_dssp             EECCCCCGGGEEESSS-SCCCEEECCCSSCEECCTTS----EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             eeeccCChhhccccCC-CCCCEEEeeccceeEccCCC----ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999999754 33789999999998765432    224567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+.   +..+.+..+......+. ...+..+|+.+.+||.+||..||.+||+++++++
T Consensus       351 ~G~~Pf~~~---~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          351 SGLSPFGGE---NDDETLRNVKSCDWNMD-DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HSCCSSCCS---SHHHHHHHHHTTCCCCC-SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HCCCCCCCc---CHHHHHHHHHhCCCCCC-cccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999874   44445555554443332 3344789999999999999999999999999875

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.8e-43  Score=288.85  Aligned_cols=236  Identities=25%  Similarity=0.472  Sum_probs=191.4

Q ss_pred             cccHHHHHHHHHhcCCCCCcE---------------EEeeeee-CCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPH---------------VMGYGTS-GDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLA   73 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~---------------~~~~~~~-~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~   73 (257)
                      +.+.+|+.++.++. ||||++               +++++.. +...++||||++++|.+++... ...+++..+..++
T Consensus        87 ~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~  165 (352)
T 2jii_A           87 GRLFNEQNFFQRAA-KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVA  165 (352)
T ss_dssp             STHHHHHHHHHHHC-CHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred             chHHHHHHHHHHhc-ccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHH
Confidence            56899999999998 888776               6677765 6788999999999999999964 3679999999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCC--eEEEEeCCcceecCCCCCC----CCCccCCCCcccccChhHhcC
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFN--TVYLVDFGLAVDFCPNCPP----RIRTRGLTGTARYASVNAHQW  147 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~--~~~l~df~~~~~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~  147 (257)
                      .|++.||.|||+.|++|+||||+||+++.+   +  .++|+|||++.........    ........+++.|+|||.+.+
T Consensus       166 ~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  242 (352)
T 2jii_A          166 CRLLDALEFLHENEYVHGNVTAENIFVDPE---DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG  242 (352)
T ss_dssp             HHHHHHHHHHHHTTCBCSCCCGGGEEEETT---EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHHHhCCccCCCCCHHHEEEcCC---CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc
Confidence            999999999999999999999999999865   5  8999999999765443211    111134579999999999999


Q ss_pred             CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhh------hcCCcHHHHHHHHHHhcCCCC
Q psy2769         148 LDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAI------CEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       148 ~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~li~~~l~~~p~  221 (257)
                      ..++.++||||||+++|+|++|..||........ .. ......... .....      ...+|+.+.+++.+||+.||+
T Consensus       243 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~  319 (352)
T 2jii_A          243 CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTE-DI-MKQKQKFVD-KPGPFVGPCGHWIRPSETLQKYLKVVMALTYE  319 (352)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH-HH-HHHHHHHHH-SCCCEECTTSCEECCCHHHHHHHHHHHTCCTT
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHH-HH-HHHHHhccC-ChhhhhhhccccCCCcHHHHHHHHHHHhCChh
Confidence            8999999999999999999999999997643221 11 111111111 11111      135789999999999999999


Q ss_pred             CCCChHHHHHHHHHHHHhccccCCCCCcccccc
Q psy2769         222 EEPNYGKLRDSFRNLLENKERCEFDLRYDWTLL  254 (257)
Q Consensus       222 ~Rp~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  254 (257)
                      +||+++++++.|++++++.+ ...+.++||+.+
T Consensus       320 ~Rps~~~l~~~L~~~~~~~~-~~~~~~~dw~~~  351 (352)
T 2jii_A          320 EKPPYAMLRNNLEALLQDLR-VSPYDPIGLPMV  351 (352)
T ss_dssp             CCCCHHHHHHHHHHHHHHTT-CCTTSCCCCCC-
T ss_pred             hCCCHHHHHHHHHHHHHhcC-CCcCccccCcCC
Confidence            99999999999999999998 888999999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.4e-42  Score=288.57  Aligned_cols=221  Identities=16%  Similarity=0.202  Sum_probs=185.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.+++++.+||||+++++++...+..|+||||+ +++|.+++....               ..++...+..++
T Consensus       130 ~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  209 (370)
T 2psq_A          130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT  209 (370)
T ss_dssp             HHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHH
Confidence            4578999999999955999999999999999999999999 899999998642               358899999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.|||++|++||||||+||+++.+   +.+||+|||++.......... ......+++.|+|||++.+..++.+
T Consensus       210 ~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~  285 (370)
T 2psq_A          210 YQLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYK-KTTNGRLPVKWMAPEALFDRVYTHQ  285 (370)
T ss_dssp             HHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCCSSCEETTCCCTTC-TTTTTTSCGGGCCHHHHHTCCCCHH
T ss_pred             HHHHHHHHHHHhCCeeccccchhhEEECCC---CCEEEccccCCcccCccccee-cccCCCcccceECHhHhcCCCCCcH
Confidence            999999999999999999999999999866   899999999998665432211 1134457789999999999999999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|+|++ |..||..........   .+...    .....+..+++.+.+++.+||+.||++||++.++++.
T Consensus       286 ~DvwslG~il~ellt~g~~p~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          286 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK---LLKEG----HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH---HHHTT----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH---HHhcC----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999 999998865443222   22211    1222336789999999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |++++....
T Consensus       359 L~~il~~~~  367 (370)
T 2psq_A          359 LDRILTLTT  367 (370)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            999987543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2e-43  Score=288.91  Aligned_cols=222  Identities=17%  Similarity=0.260  Sum_probs=184.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++..+...++||||+ +++|.+++......+++..+..++.|++.||.|||+.|+
T Consensus        94 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  172 (325)
T 3kul_A           94 RRDFLSEASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY  172 (325)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            457889999999998 999999999999999999999999 999999998666789999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.................+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       173 vH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~  249 (325)
T 3kul_A          173 VHRDLAARNVLVDSN---LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA  249 (325)
T ss_dssp             ECSCCSGGGEEECTT---CCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCCcceEEECCC---CCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHc
Confidence            999999999999766   89999999999876554322222233456778999999998889999999999999999999


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKER  242 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~  242 (257)
                       |..||.....   ......+...    ........+|+.+.+++..||+.||++||++.++++.|+++++....
T Consensus       250 ~g~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~  317 (325)
T 3kul_A          250 YGERPYWNMTN---RDVISSVEEG----YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES  317 (325)
T ss_dssp             TSCCTTTTSCH---HHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred             CCCCCcccCCH---HHHHHHHHcC----CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence             9999987533   2222322222    12223367899999999999999999999999999999999987653

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.8e-42  Score=288.17  Aligned_cols=233  Identities=19%  Similarity=0.250  Sum_probs=184.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+..|..++.++.+||||+++++++.+....|+||||+ +++|.+.+.. ...+++..+..++.|++.||.|||++
T Consensus        94 ~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~  172 (396)
T 4dc2_A           94 EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHER  172 (396)
T ss_dssp             --CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345668899999999977999999999999999999999999 9999999985 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++......   ........||+.|+|||++.+..++.++|+||||+++|+|
T Consensus       173 givHrDLKp~NILl~~~---g~ikL~DFGla~~~~~~---~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyel  246 (396)
T 4dc2_A          173 GIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRP---GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM  246 (396)
T ss_dssp             TCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCT---TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CEEeccCCHHHEEECCC---CCEEEeecceeeecccC---CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHH
Confidence            99999999999999876   89999999998753222   1222567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCcc------HHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         167 LRGKLPWQSIKSDN------EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       167 ~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ++|..||.......      .......+.....     .++..+++.+.++|++||..||++||++... ..+++++.  
T Consensus       247 l~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~-~~~~ei~~--  318 (396)
T 4dc2_A          247 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-----RIPRSLSVKAASVLKSFLNKDPKERLGCHPQ-TGFADIQG--  318 (396)
T ss_dssp             HHSSCSSTTTTC------CCHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTT-THHHHHHH--
T ss_pred             HhCCCCCcccccccccchhhHHHHHHHHhcccc-----CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCC-CCHHHHhc--
Confidence            99999997543221      1222333333222     2336789999999999999999999997311 11222222  


Q ss_pred             cccCCCCCccccccccC
Q psy2769         241 ERCEFDLRYDWTLLERK  257 (257)
Q Consensus       241 ~~~~~~~~~~~~~~~~~  257 (257)
                        ..+-...||+.+++|
T Consensus       319 --Hpff~~i~w~~l~~~  333 (396)
T 4dc2_A          319 --HPFFRNVDWDMMEQK  333 (396)
T ss_dssp             --STTTTTCCHHHHHTT
T ss_pred             --CccccCCCHHHHHcC
Confidence              235566788877654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=4.9e-42  Score=291.02  Aligned_cols=213  Identities=20%  Similarity=0.238  Sum_probs=182.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++.+. ||||+++++++.+.+..++||||+ |++|.+.+.. ...+++..+..++.|++.||.|||+.||
T Consensus        54 ~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~-~~~~~e~~~~~i~~qil~aL~~lH~~gi  131 (444)
T 3soa_A           54 HQKLEREARICRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA-REYYSEADASHCIQQILEAVLHCHQMGV  131 (444)
T ss_dssp             HHHHHHHHHHHHHCC-BTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            456889999999997 999999999999999999999999 9999999985 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+..++.+||+|||++........   ......||+.|+|||++.+..++.++||||+|+++|+|++
T Consensus       132 vHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~  208 (444)
T 3soa_A          132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ---AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV  208 (444)
T ss_dssp             BCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             cccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc---eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHh
Confidence            9999999999998654558899999999976544321   1145679999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||...   +.......+.......+.+ ....+|+.+.++|.+||+.||++||++.++++
T Consensus       209 G~~Pf~~~---~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          209 GYPPFWDE---DQHRLYQQIKAGAYDFPSP-EWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             SSCSCCCS---SHHHHHHHHHHTCCCCCTT-TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCCCc---cHHHHHHHHHhCCCCCCcc-ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            99999873   4445555555554443332 33578999999999999999999999999876

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=4.6e-42  Score=277.55  Aligned_cols=209  Identities=21%  Similarity=0.312  Sum_probs=176.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++..+. ||||+++++++..++..++||||+ +++|.+++..  ..+++..+..++.|++.||.|||+.|
T Consensus        60 ~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (297)
T 3fxz_A           60 KKELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ  136 (297)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhcCC-CCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4566889999999998 999999999999999999999999 9999999984  57999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++.........   .....|++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       137 i~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  210 (297)
T 3fxz_A          137 VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI  210 (297)
T ss_dssp             EECCCCSGGGEEECTT---CCEEECCCTTCEECCSTTCC---BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHH
T ss_pred             ceeCCCCHHHEEECCC---CCEEEeeCCCceecCCcccc---cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999999876   88999999998776543221   24567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||....   .......+.....  .....+..+++.+.++|.+||+.||++||+++++++
T Consensus       211 ~g~~pf~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          211 EGEPPYLNEN---PLRALYLIATNGT--PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HSSCTTTTSC---HHHHHHHHHHHCS--CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hCCCCCCCCC---HHHHHHHHHhCCC--CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            9999998743   2222222222211  122223578999999999999999999999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.7e-42  Score=281.67  Aligned_cols=224  Identities=16%  Similarity=0.207  Sum_probs=183.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.+++ ||||+++++++.++...++||||+ +++|.+++......+++..+..++.|++.||.|||+.|
T Consensus        50 ~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  128 (310)
T 3s95_A           50 TQRTFLKEVKVMRCLE-HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN  128 (310)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567889999999998 999999999999999999999999 99999999976778999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC-----------CccCCCCcccccChhHhcCCCCCCcchH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI-----------RTRGLTGTARYASVNAHQWLDQSPRDDL  156 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv  156 (257)
                      ++|+||||+||+++.+   +.++|+|||++...........           ......||+.|+|||.+.+..++.++||
T Consensus       129 ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  205 (310)
T 3s95_A          129 IIHRDLNSHNCLVREN---KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDV  205 (310)
T ss_dssp             EECSCCSTTSEEECTT---SCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHH
T ss_pred             ccCCCCCcCeEEECCC---CCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHH
Confidence            9999999999999866   8899999999987644322110           1124579999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      ||||+++|+|++|..||............. ......    ...+..+|+.+.+++.+||+.||++||+++++++.|+++
T Consensus       206 ~slG~~l~el~~g~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l  280 (310)
T 3s95_A          206 FSFGIVLCEIIGRVNADPDYLPRTMDFGLN-VRGFLD----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL  280 (310)
T ss_dssp             HHHHHHHHHHHHTCCSSTTTSCBCTTSSBC-HHHHHH----HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCcchhhhHHHHhhh-hhcccc----ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            999999999999999987644332110000 000000    111267889999999999999999999999999999998


Q ss_pred             HHhcc
Q psy2769         237 LENKE  241 (257)
Q Consensus       237 ~~~~~  241 (257)
                      .....
T Consensus       281 ~~~~~  285 (310)
T 3s95_A          281 RMHLA  285 (310)
T ss_dssp             HHHHH
T ss_pred             HHhcc
Confidence            87654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.5e-42  Score=282.57  Aligned_cols=205  Identities=22%  Similarity=0.310  Sum_probs=176.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+++.+|+.+++.+. ||||+++++++.+.+..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        58 ~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i  135 (328)
T 3fe3_A           58 LQKLFREVRIMKILN-HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVA-HGRMKEKEARSKFRQIVSAVQYCHQKRI  135 (328)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            456889999999998 999999999999999999999999 9999999985 4679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCC-CcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS-PRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~-~~~Dv~slg~~l~~l~  167 (257)
                      +||||||+||+++.+   +.++|+|||++.......    ......|++.|+|||++.+..++ .++||||+|+++|+|+
T Consensus       136 vHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  208 (328)
T 3fe3_A          136 VHRDLKAENLLLDAD---MNIKIADFGFSNEFTVGG----KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV  208 (328)
T ss_dssp             CCSCCCGGGEEECTT---SCEEECSTTCCGGGSSSC----GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHH
T ss_pred             eccCCCHHHEEEcCC---CCEEEeeccCceecCCCC----ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHH
Confidence            999999999999876   899999999987654332    22556799999999999988764 7899999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+.   +.......+.......     +..+++.+.+++++||..||.+|||++++++
T Consensus       209 ~g~~pf~~~---~~~~~~~~i~~~~~~~-----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          209 SGSLPFDGQ---NLKELRERVLRGKYRI-----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HSSCSSCCS---SHHHHHHHHHHCCCCC-----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             hCCCCCCCC---CHHHHHHHHHhCCCCC-----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            999999874   3334444444433332     2568999999999999999999999999875

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4.5e-42  Score=279.01  Aligned_cols=219  Identities=20%  Similarity=0.301  Sum_probs=174.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS--KRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.++.+++ ||||+++++++......++||||+ +++|.+++....  ..+++..+..++.|++.||.|||+.
T Consensus        78 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  156 (309)
T 3p86_A           78 VNEFLREVAIMKRLR-HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR  156 (309)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence            356889999999998 999999999999999999999999 899999998432  2399999999999999999999999


Q ss_pred             C--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          87 K--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        87 ~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      |  ++||||||+||+++.+   +.++|+|||++........   ......|++.|+|||.+.+..++.++||||||+++|
T Consensus       157 ~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  230 (309)
T 3p86_A          157 NPPIVHRNLKSPNLLVDKK---YTVKVCDFGLSRLKASTFL---SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW  230 (309)
T ss_dssp             SSCCCCTTCCGGGEEECTT---CCEEECCCC--------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred             CCCEECCCCChhhEEEeCC---CcEEECCCCCCcccccccc---ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHH
Confidence            9  9999999999999766   8999999999865433211   114567899999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      +|++|..||.....   ......+.   ........+..+|+.+.++|.+||+.||++||+++++++.|+++++...
T Consensus       231 elltg~~Pf~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~  301 (309)
T 3p86_A          231 ELATLQQPWGNLNP---AQVVAAVG---FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV  301 (309)
T ss_dssp             HHHHCCCTTTTSCH---HHHHHHHH---HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred             HHHhCCCCCCCCCH---HHHHHHHH---hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence            99999999987532   22222221   1223333446789999999999999999999999999999999998654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=2.5e-42  Score=278.74  Aligned_cols=228  Identities=18%  Similarity=0.158  Sum_probs=177.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.++.+++ ||||+++++++..  ....++||||+ +++|.+++......+++..+..++.|++.||.|||+.
T Consensus        55 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  133 (295)
T 3ugc_A           55 LRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK  133 (295)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC
Confidence            457889999999998 9999999998854  35689999999 9999999987666799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++||||||+++|+|
T Consensus       134 ~ivH~Dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  210 (295)
T 3ugc_A          134 RYIHRDLATRNILVENE---NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL  210 (295)
T ss_dssp             TCCCSCCSGGGEEEEET---TEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCHhhEEEcCC---CeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHH
Confidence            99999999999999877   899999999997665443222222345577789999999998999999999999999999


Q ss_pred             HhCCCCCCCCCCc---------cHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         167 LRGKLPWQSIKSD---------NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       167 ~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      ++|..||......         .....................+..+|+.+.+++.+||+.||++|||+.++++.|+++.
T Consensus       211 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          211 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             HHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            9999998753211         0000111111112222222334678999999999999999999999999999999998


Q ss_pred             Hhcc
Q psy2769         238 ENKE  241 (257)
Q Consensus       238 ~~~~  241 (257)
                      ++..
T Consensus       291 ~~l~  294 (295)
T 3ugc_A          291 DNMA  294 (295)
T ss_dssp             HC--
T ss_pred             Hhcc
Confidence            7653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.7e-42  Score=286.12  Aligned_cols=203  Identities=23%  Similarity=0.248  Sum_probs=171.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|..++..+.+||||+++++++.+....|+||||+ |++|.+++.. ...+++..+..++.|++.||.|||++|
T Consensus        66 ~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~g  144 (353)
T 3txo_A           66 DVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEIISALMFLHDKG  144 (353)
T ss_dssp             THHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            44567889999999977999999999999999999999999 9999999985 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+||||||+||+++.+   +.++|+|||++.......   .......||+.|+|||++.+..++.++||||||+++|+|+
T Consensus       145 ivHrDlkp~NILl~~~---g~ikL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  218 (353)
T 3txo_A          145 IIYRDLKLDNVLLDHE---GHCKLADFGMCKEGICNG---VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML  218 (353)
T ss_dssp             CBCCCCCGGGEEECTT---SCEEECCCTTCBCSCC------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHH
T ss_pred             CcccCCCHHHEEECCC---CCEEEccccceeecccCC---ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHH
Confidence            9999999999999876   899999999987533221   1225567999999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      +|..||...   +..+.+..+.......+     ..+++.+.++|++||..||++||++
T Consensus       219 ~G~~Pf~~~---~~~~~~~~i~~~~~~~p-----~~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          219 CGHAPFEAE---NEDDLFEAILNDEVVYP-----TWLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             HSSCSSCCS---SHHHHHHHHHHCCCCCC-----TTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             hCCCCCCCC---CHHHHHHHHHcCCCCCC-----CCCCHHHHHHHHHHhhhCHHHccCC
Confidence            999999874   44444555554433332     5689999999999999999999998

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=6.4e-42  Score=280.93  Aligned_cols=208  Identities=18%  Similarity=0.212  Sum_probs=176.1

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++.+. ||||+++++++.+.+..|+||||+ |++|.+++.. ...+++..+..++.|++.||.|||++
T Consensus        47 ~~~~~~~~E~~~l~~l~-hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~  124 (337)
T 1o6l_A           47 DEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSR  124 (337)
T ss_dssp             TCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhCC-CCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34557889999999998 999999999999999999999999 9999999884 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.++|+|||++.......   .......||+.|+|||++.+..++.++|+||||+++|+|
T Consensus       125 ~ivHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  198 (337)
T 1o6l_A          125 DVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  198 (337)
T ss_dssp             TCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCCTT---CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHH
T ss_pred             CeecCcCCHHHEEECCC---CCEEEeeccchhhcccCC---CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHH
Confidence            99999999999999876   899999999987533221   122556799999999999998999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      ++|..||...   +.......+......     .+..+|+.+.++|.+||..||++||     +++++++
T Consensus       199 l~g~~Pf~~~---~~~~~~~~i~~~~~~-----~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          199 MCGRLPFYNQ---DHERLFELILMEEIR-----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHCCCC-----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             hcCCCCCCCC---CHHHHHHHHHcCCCC-----CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            9999999873   333334444333222     2357899999999999999999999     7777754

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.6e-42  Score=284.20  Aligned_cols=212  Identities=17%  Similarity=0.260  Sum_probs=180.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++.+....++||||+ |++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        59 ~~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~gi  136 (361)
T 2yab_A           59 REEIEREVSILRQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKI  136 (361)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTT-CSCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            457899999999998 999999999999999999999999 9999999974 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCC-CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVREN-FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||||+||+++.+.. ...++|+|||++.......    ......||+.|+|||++.+..++.++||||||+++|+|+
T Consensus       137 vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll  212 (361)
T 2yab_A          137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL  212 (361)
T ss_dssp             ECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC----CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC----ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHH
Confidence            99999999999976521 1279999999998765432    124567999999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+.   +..+.+..+......+ .+..+..+|+.+.++|.+||..||++|||++++++
T Consensus       213 ~g~~Pf~~~---~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          213 SGASPFLGD---TKQETLANITAVSYDF-DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HSCCSSCCS---SHHHHHHHHHTTCCCC-CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hCCCCCCCC---CHHHHHHHHHhcCCCC-CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            999999874   3444444444443332 33455789999999999999999999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.8e-41  Score=280.20  Aligned_cols=214  Identities=20%  Similarity=0.222  Sum_probs=180.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..+.+.+|+.+++.++ ||||+++++++..++..++||||+ +++|.+.+...   ...+++..+..++.|++.||.|||
T Consensus        69 ~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH  147 (351)
T 3c0i_A           69 STEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH  147 (351)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3567899999999998 999999999999999999999999 89998888654   345899999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.|++|+||||+||+++.+.....++|+|||++........   ......||+.|+|||++.+..++.++||||||+++|
T Consensus       148 ~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  224 (351)
T 3c0i_A          148 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL---VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILF  224 (351)
T ss_dssp             HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC---BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred             HCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe---eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHH
Confidence            99999999999999998765556799999999987654321   124567999999999999988999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|++|..||...    .......+........ +.....+|+.+.++|.+||+.||++||++.++++
T Consensus       225 ~ll~g~~pf~~~----~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          225 ILLSGCLPFYGT----KERLFEGIIKGKYKMN-PRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHSSCSSCSS----HHHHHHHHHHTCCCCC-HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHCCCCCCCc----HHHHHHHHHcCCCCCC-ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            999999999873    2333344444333332 3344678999999999999999999999999875

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=6.6e-43  Score=290.82  Aligned_cols=221  Identities=17%  Similarity=0.263  Sum_probs=173.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++......++||||+ +++|.+++......+++..+..++.|++.||.|||+.|+
T Consensus        90 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (373)
T 2qol_A           90 RRDFLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY  168 (373)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            457899999999997 999999999999999999999999 999999998656679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.+||+|||++.................++..|+|||.+.+..++.++||||||+++|+|++
T Consensus       169 vH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt  245 (373)
T 2qol_A          169 VHRDLAARNILINSN---LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS  245 (373)
T ss_dssp             CCSCCCGGGEEECTT---CCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCCcceEEEcCC---CCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHh
Confidence            999999999999766   89999999998765443221111122345678999999999899999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                       |..||.....   ......+... ...   .....+|..+.+++.+||+.||++||++.++++.|++++++.+
T Consensus       246 ~g~~P~~~~~~---~~~~~~i~~~-~~~---~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~  312 (373)
T 2qol_A          246 YGERPYWEMSN---QDVIKAVDEG-YRL---PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG  312 (373)
T ss_dssp             TC-CTTTTCCH---HHHHHHHHTT-EEC---CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred             CCCCCCCCCCH---HHHHHHHHcC-CCC---CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence             9999987532   2222222221 111   1225789999999999999999999999999999999998654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.7e-43  Score=293.71  Aligned_cols=219  Identities=16%  Similarity=0.264  Sum_probs=182.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++...+..++||||+ +++|.+++......++...+..++.|++.||.|||+.|+
T Consensus       156 ~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  234 (377)
T 3cbl_A          156 KAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC  234 (377)
T ss_dssp             HTTTTHHHHHHTTCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            457899999999998 999999999999989999999999 999999998766679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.+||+|||++.......... ......++..|+|||.+.+..++.++||||||+++|||++
T Consensus       235 vHrDlkp~Nil~~~~---~~~kl~DfG~s~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t  310 (377)
T 3cbl_A          235 IHRDLAARNCLVTEK---NVLKISDFGMSREEADGVYAA-SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS  310 (377)
T ss_dssp             ECSCCSGGGEEECTT---CCEEECCGGGCEECTTSEEEC-CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             CCcccCHHHEEEcCC---CcEEECcCCCceecCCCceee-cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999766   899999999987643321111 0022335678999999998888999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                       |..||.......   ....+...    .....+..+|+.+.+++.+||+.||++|||++++++.|+++.+..
T Consensus       311 ~g~~p~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~  376 (377)
T 3cbl_A          311 LGASPYPNLSNQQ---TREFVEKG----GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH  376 (377)
T ss_dssp             TSCCSSTTSCHHH---HHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCHHH---HHHHHHcC----CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence             999998754322   22222211    122233678999999999999999999999999999999987753

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-42  Score=276.93  Aligned_cols=231  Identities=17%  Similarity=0.245  Sum_probs=189.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.++. ||||+++++++. .+..++|||++ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        53 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  130 (287)
T 1u59_A           53 DTEEMMREAQIMHQLD-NPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN  130 (287)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCEEEEEE-SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeEEEEEec-CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3567889999999997 999999999994 45689999999 88999999755667999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||++.................+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       131 i~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  207 (287)
T 1u59_A          131 FVHRDLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL  207 (287)
T ss_dssp             EECCCCSGGGEEEEET---TEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             EeeCCCchheEEEcCC---CCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999876   8999999999987654432222223445688999999999888899999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCC
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFD  246 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~  246 (257)
                      + |..||........   ...+...    .....+..+|+.+.++|.+||+.||++||++.++++.|++++...+.-..-
T Consensus       208 t~g~~p~~~~~~~~~---~~~i~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~  280 (287)
T 1u59_A          208 SYGQKPYKKMKGPEV---MAFIEQG----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG  280 (287)
T ss_dssp             TTSCCTTTTCCTHHH---HHHHHTT----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSS
T ss_pred             cCCCCCcccCCHHHH---HHHHhcC----CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccC
Confidence            8 9999987544322   2222221    222334678999999999999999999999999999999999987743333


Q ss_pred             CCccc
Q psy2769         247 LRYDW  251 (257)
Q Consensus       247 ~~~~~  251 (257)
                      ...+|
T Consensus       281 ~~~~~  285 (287)
T 1u59_A          281 HHHHH  285 (287)
T ss_dssp             CCCTT
T ss_pred             Ccccc
Confidence            33333

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.3e-42  Score=278.97  Aligned_cols=222  Identities=20%  Similarity=0.341  Sum_probs=179.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+++.+|+.++.++. ||||+++++++..++..++||||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        55 ~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  132 (294)
T 4eqm_A           55 LKRFEREVHNSSQLS-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIES-HGPLSVDTAINFTNQILDGIKHAHDMRI  132 (294)
T ss_dssp             HHHHHHHHHHHTTCC-BTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhcCC-CCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            457889999999998 999999999999999999999999 8999999985 4579999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++........  .......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       133 ~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~  207 (294)
T 4eqm_A          133 VHRDIKPQNILIDSN---KTLKIFDFGIAKALSETSL--TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV  207 (294)
T ss_dssp             CCCCCCGGGEEECTT---SCEEECCCSSSTTC---------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             ccCCCCHHHEEECCC---CCEEEEeCCCccccccccc--cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHh
Confidence            999999999999766   8899999999876543221  11234568999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-ChHHHHHHHHHHHHhcc
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-NYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~~~~~l~~~~~~~~  241 (257)
                      |..||.+...   ............+.........+|+.+.++|.+||+.||++|| +++++.+.|++++....
T Consensus       208 g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~  278 (294)
T 4eqm_A          208 GEPPFNGETA---VSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR  278 (294)
T ss_dssp             SSCSSCSSCH---HHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred             CCCCCCCCCh---HHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence            9999987432   2222222222222222334467899999999999999999999 89999999998887654

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=9.2e-42  Score=282.86  Aligned_cols=212  Identities=20%  Similarity=0.254  Sum_probs=180.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++.+....++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|+
T Consensus        72 ~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i  149 (362)
T 2bdw_A           72 FQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHSNGI  149 (362)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT-CSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            457889999999998 999999999999999999999999 8999998874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+...+.++|+|||++.......    ......|++.|+|||++.+..++.++||||||+++|+|++
T Consensus       150 vH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  225 (362)
T 2bdw_A          150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV  225 (362)
T ss_dssp             BCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             EeccCchHHEEEecCCCCCCEEEeecCcceEecCCc----ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHH
Confidence            999999999999876555679999999987654322    1144679999999999999899999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||...   +.......+.......+. .....+|+.+.++|.+||..||++||++.++++
T Consensus       226 g~~Pf~~~---~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          226 GYPPFWDE---DQHRLYAQIKAGAYDYPS-PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             SSCSSCCS---SHHHHHHHHHHTCCCCCT-TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCC---CHHHHHHHHHhCCCCCCc-ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            99999873   334444445544433332 233578999999999999999999999998865

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=9.9e-42  Score=281.43  Aligned_cols=204  Identities=19%  Similarity=0.216  Sum_probs=174.0

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+..|..++..+.+||+|+++++++.+.+..|+||||+ |++|.+++.. ...+++..+..++.|++.||.|||+.
T Consensus        62 ~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~  140 (353)
T 2i0e_A           62 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSK  140 (353)
T ss_dssp             TCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345668889999998867999999999999999999999999 9999999985 45799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.++|+|||++.......   .......||+.|+|||++.+..++.++|+||||+++|+|
T Consensus       141 givHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  214 (353)
T 2i0e_A          141 GIIYRDLKLDNVMLDSE---GHIKIADFGMCKENIWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM  214 (353)
T ss_dssp             TCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHH
T ss_pred             CEEeccCCHHHEEEcCC---CcEEEEeCCcccccccCC---cccccccCCccccChhhhcCCCcCCcccccchHHHHHHH
Confidence            99999999999999876   899999999987533221   122556799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      ++|..||...   +.......+.......     +..+|+.+.++|.+||..||++||++
T Consensus       215 l~G~~Pf~~~---~~~~~~~~i~~~~~~~-----p~~~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          215 LAGQAPFEGE---DEDELFQSIMEHNVAY-----PKSMSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHCCCCC-----CTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             HcCCCCCCCC---CHHHHHHHHHhCCCCC-----CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            9999999873   3444444554433322     36789999999999999999999975

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=7.6e-42  Score=281.27  Aligned_cols=205  Identities=20%  Similarity=0.207  Sum_probs=174.4

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+..|..++..+.+||||+++++++.+....|+||||+ |++|.+++.. ...+++..+..++.|++.||.|||++
T Consensus        59 ~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~  137 (345)
T 1xjd_A           59 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHSK  137 (345)
T ss_dssp             TCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345568889999999866999999999999999999999999 9999999985 46799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++||||||+||+++.+   +.++|+|||++.......   .......||+.|+|||++.+..++.++|+||||+++|+|
T Consensus       138 ~ivHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  211 (345)
T 1xjd_A          138 GIVYRDLKLDNILLDKD---GHIKIADFGMCKENMLGD---AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM  211 (345)
T ss_dssp             TCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CeEeCCCChhhEEECCC---CCEEEeEChhhhhcccCC---CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHH
Confidence            99999999999999876   899999999987543221   122556799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      ++|..||...   +.......+.....     ..+..+++.+.++|.+||..||++||++.
T Consensus       212 l~g~~Pf~~~---~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~lL~~dp~~R~~~~  264 (345)
T 1xjd_A          212 LIGQSPFHGQ---DEEELFHSIRMDNP-----FYPRWLEKEAKDLLVKLFVREPEKRLGVR  264 (345)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHSCSSGGGSBTTB
T ss_pred             hcCCCCCCCC---CHHHHHHHHHhCCC-----CCCcccCHHHHHHHHHHhcCCHhHcCCCh
Confidence            9999999874   33344444433322     22356899999999999999999999986

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.7e-42  Score=274.21  Aligned_cols=218  Identities=16%  Similarity=0.236  Sum_probs=183.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.+++ ||||+++++++.+....++||||+ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        48 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (269)
T 4hcu_A           48 SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC  126 (269)
T ss_dssp             CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4567899999999998 999999999999999999999999 99999999866667999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++........  .......+++.|+|||.+.+..++.++||||+|+++|+|+
T Consensus       127 i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll  201 (269)
T 4hcu_A          127 VIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF  201 (269)
T ss_dssp             CCCSCCCGGGEEECGG---GCEEECCTTGGGGBCCHHH--HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             eecCCcchheEEEcCC---CCEEecccccccccccccc--ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHh
Confidence            9999999999999776   8899999999875433211  1113345677899999999889999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      + |..||....   .......+...    .....+..+++.+.+++.+||+.||++||++.++++.|+++.+.
T Consensus       202 ~~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          202 SEGKIPYENRS---NSEVVEDISTG----FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             TTSCCTTTTCC---HHHHHHHHHTT----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             cCCCCCCCCCC---HHHHHHHHhcC----ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            9 999998743   33333333222    11222356789999999999999999999999999999998764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=6.5e-42  Score=283.58  Aligned_cols=221  Identities=20%  Similarity=0.257  Sum_probs=181.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-ccEEEEecc-CCCHHHHHHHhcC-------------------------
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-YNILVMELL-GPSLEDLFQYCSK-------------------------   62 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-~~~~v~e~~-~~~L~~~~~~~~~-------------------------   62 (257)
                      .+.+.+|+.++.++.+||||+++++++...+ ..++||||+ +++|.+++.....                         
T Consensus        69 ~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (359)
T 3vhe_A           69 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVD  148 (359)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------
T ss_pred             HHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchh
Confidence            3568999999999977999999999988754 589999999 9999999985321                         


Q ss_pred             ----------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeec
Q psy2769          63 ----------------------------------------RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV  102 (257)
Q Consensus        63 ----------------------------------------~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~  102 (257)
                                                              .+++..+..++.|++.||+|||+.|++|+||||+||+++.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~  228 (359)
T 3vhe_A          149 LKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE  228 (359)
T ss_dssp             -----------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred             hhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC
Confidence                                                    1889999999999999999999999999999999999987


Q ss_pred             cCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccH
Q psy2769         103 RENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNE  181 (257)
Q Consensus       103 ~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~  181 (257)
                      +   +.++|+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||........
T Consensus       229 ~---~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  304 (359)
T 3vhe_A          229 K---NVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE  304 (359)
T ss_dssp             G---GCEEECCCGGGSCTTSCTTC-EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             C---CcEEEEeccceeeecccccc-hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH
Confidence            6   88999999999765443221 12244567889999999999899999999999999999998 9999987544322


Q ss_pred             HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         182 ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      .  ...+...    .....+..+++.+.+++..||+.||++||++.++++.|+++++.+
T Consensus       305 ~--~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          305 F--CRRLKEG----TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             H--HHHHHHT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             H--HHHHHcC----CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            1  1112111    122233668999999999999999999999999999999998754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=5e-42  Score=275.18  Aligned_cols=218  Identities=19%  Similarity=0.297  Sum_probs=172.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++. ++..++||||+ +++|.+++......+++..+..++.|++.||.+||+.|+
T Consensus        60 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  137 (281)
T 1mp8_A           60 REKFLQEALTMRQFD-HPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF  137 (281)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            457889999999997 999999999985 45689999999 889999998666679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.........  ......+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       138 ~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~  212 (281)
T 1mp8_A          138 VHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYY--KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM  212 (281)
T ss_dssp             CCSCCSGGGEEEEET---TEEEECC---------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred             ecccccHHHEEECCC---CCEEECccccccccCccccc--ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHh
Confidence            999999999999876   89999999998765443211  1133456788999999998889999999999999999996


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                       |..||..........   .+...    ........+|+.+.+++.+||+.||++||++.++++.|++++++..
T Consensus       213 ~g~~pf~~~~~~~~~~---~i~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  279 (281)
T 1mp8_A          213 HGVKPFQGVKNNDVIG---RIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  279 (281)
T ss_dssp             TSCCTTTTCCGGGHHH---HHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCcCCHHHHHH---HHHcC----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence             999998865544322   22221    1222346789999999999999999999999999999999988653

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-41  Score=284.32  Aligned_cols=221  Identities=18%  Similarity=0.210  Sum_probs=185.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+++.+|+.+++++.+||||+++++++...+..++||||+ +++|.+++....               ..+++..+..++
T Consensus       118 ~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  197 (382)
T 3tt0_A          118 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA  197 (382)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHH
Confidence            3578899999999966999999999999999999999999 899999998643               359999999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.+||+.|++||||||+||+++.+   +.++|+|||++.......... ......+++.|+|||++.+..++.+
T Consensus       198 ~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~  273 (382)
T 3tt0_A          198 YQVARGMEYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFDRIYTHQ  273 (382)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEECTT---CCEEECSCSCCCCSSCCCTTC-CCTTCCCGGGGSCHHHHHSCCCCHH
T ss_pred             HHHHHHHHHHHhCCEecCCCCcceEEEcCC---CcEEEcccCcccccccccccc-cccCCCCCcceeCHHHhcCCCCCch
Confidence            999999999999999999999999999866   899999999997654432211 1244567889999999999999999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|+|++ |..||....   .......+...    ........+++.+.+++.+||+.||++||+++++++.
T Consensus       274 ~DiwslG~il~ellt~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          274 SDVWSFGVLLWEIFTLGGSPYPGVP---VEELFKLLKEG----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCC---HHHHHHHHHTT----CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHHcC----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999 999998743   22222222222    2222336789999999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |++++....
T Consensus       347 L~~~~~~~~  355 (382)
T 3tt0_A          347 LDRIVALTS  355 (382)
T ss_dssp             HHHHHHHSC
T ss_pred             HHHHHHHHh
Confidence            999988554

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-42  Score=287.60  Aligned_cols=233  Identities=15%  Similarity=0.203  Sum_probs=188.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS------KRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ...+.+|+.++.++. ||||+++++++......++||||+ +++|.+++....      ..++...+..++.|++.||.|
T Consensus       118 ~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  196 (367)
T 3l9p_A          118 ELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY  196 (367)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHH
Confidence            346889999999997 999999999999999999999999 999999998653      458999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ||+.|++||||||+||+++.++....++|+|||++.......... ......+++.|+|||.+.+..++.++||||||++
T Consensus       197 LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~i  275 (367)
T 3l9p_A          197 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR-KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL  275 (367)
T ss_dssp             HHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCT-TCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccc-cCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHH
Confidence            999999999999999999866445679999999987543221111 1134567889999999999899999999999999


Q ss_pred             HHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         163 LVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       163 l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      +|+|++ |..||....   .......+....    .......+|+.+.+++.+||+.||++||++.++++.|+.+.....
T Consensus       276 l~ellt~g~~pf~~~~---~~~~~~~i~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~  348 (367)
T 3l9p_A          276 LWEIFSLGYMPYPSKS---NQEVLEFVTSGG----RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  348 (367)
T ss_dssp             HHHHHTTSCCSSTTCC---HHHHHHHHHTTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             HHHHHhCCCCCCCCCC---HHHHHHHHHcCC----CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence            999998 999998743   333333332221    122236789999999999999999999999999999999988665


Q ss_pred             ccCCCCCccc
Q psy2769         242 RCEFDLRYDW  251 (257)
Q Consensus       242 ~~~~~~~~~~  251 (257)
                      -....-+.+|
T Consensus       349 ~~~~~~p~~~  358 (367)
T 3l9p_A          349 VINTALPIEY  358 (367)
T ss_dssp             HHTCCCCCC-
T ss_pred             hccCCCcccc
Confidence            3333333333

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-42  Score=282.19  Aligned_cols=213  Identities=16%  Similarity=0.198  Sum_probs=181.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. ||||+++++++.+....++||||+ +++|.+++......+++..+..++.|++.||.|||+.|
T Consensus        44 ~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g  122 (321)
T 1tki_A           44 DQVLVKKEISILNIAR-HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN  122 (321)
T ss_dssp             HHHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHhCC-CCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456889999999998 999999999999999999999999 89999999854567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+ .++.++|+|||++.......    ......+++.|+|||++.+..++.++||||+|+++|+|+
T Consensus       123 ivH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  197 (321)
T 1tki_A          123 IGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL  197 (321)
T ss_dssp             EECCCCCGGGEEESSS-SCCCEEECCCTTCEECCTTC----EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCHHHEEEccC-CCCCEEEEECCCCeECCCCC----ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999863 23789999999998764432    113456899999999999988899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||...   +....+..+........ ......+|+.+.++|.+||..||++|||+.++++
T Consensus       198 ~g~~pf~~~---~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          198 SGINPFLAE---TNQQIIENIMNAEYTFD-EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HSSCTTCCS---SHHHHHHHHHHTCCCCC-HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hCCCCCcCC---CHHHHHHHHHcCCCCCC-hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999874   33444445554443333 3344689999999999999999999999999987

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.1e-41  Score=283.75  Aligned_cols=208  Identities=21%  Similarity=0.271  Sum_probs=176.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. ||||+++++++.+....|+||||+ |++|.+++.. ...+++..+..++.|++.||.|||+.|
T Consensus        58 ~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g  135 (384)
T 4fr4_A           58 EVRNVFKELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ-NVHFKEETVKLFICELVMALDYLQNQR  135 (384)
T ss_dssp             CHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4467889999999997 999999999999999999999999 9999999984 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC---CCCCCcchHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW---LDQSPRDDLEALCYTLV  164 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~Dv~slg~~l~  164 (257)
                      |+||||||+||+++.+   +.++|+|||++.......    ......||+.|+|||++.+   ..++.++||||||+++|
T Consensus       136 ivHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~----~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~  208 (384)
T 4fr4_A          136 IIHRDMKPDNILLDEH---GHVHITDFNIAAMLPRET----QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY  208 (384)
T ss_dssp             EECCCCSGGGEEECTT---SCEEECCCTTCEECCTTC----CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHH
T ss_pred             ceeccCcHHHeEECCC---CCEEEeccceeeeccCCC----ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHH
Confidence            9999999999999866   899999999998764332    2255679999999999974   45789999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-hHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-YGKLR  230 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-~~~~~  230 (257)
                      +|++|..||..............+......     .+..+++.+.++|.+||+.||.+||+ +++++
T Consensus       209 elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-----~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          209 ELLRGRRPYHIRSSTSSKEIVHTFETTVVT-----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             HHHHSSCSSCCCTTSCHHHHHHHHHHCCCC-----CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             HHHhCCCCCCCCCCccHHHHHHHHhhcccC-----CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            999999999876655555554444433222     23678999999999999999999998 55443

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8e-42  Score=280.39  Aligned_cols=227  Identities=12%  Similarity=0.196  Sum_probs=180.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++......++|||++ +++|.+++......+++..+..++.|++.||.+||+.|+
T Consensus        90 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (333)
T 1mqb_A           90 RVDFLGEAGIMGQFS-HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY  168 (333)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            446889999999998 999999999999999999999999 889999998666789999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++||||||+++|+|++
T Consensus       169 vH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  245 (333)
T 1mqb_A          169 VHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT  245 (333)
T ss_dssp             CCSCCCGGGEEECTT---CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCChheEEECCC---CcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHc
Confidence            999999999999766   89999999998765443222211123346778999999999899999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCCC
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDL  247 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~~  247 (257)
                       |..||.....   ......+...    ........+|+.+.+++.+||+.||++||++.++++.|++++......+.-.
T Consensus       246 ~g~~pf~~~~~---~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~~~~~  318 (333)
T 1mqb_A          246 YGERPYWELSN---HEVMKAINDG----FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSLKTLA  318 (333)
T ss_dssp             TSCCTTTTCCH---HHHHHHHHTT----CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGGGSBC
T ss_pred             CCCCCcccCCH---HHHHHHHHCC----CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchhhhhhc
Confidence             9999987532   2222322222    1112235789999999999999999999999999999999998766444333

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=5.1e-42  Score=292.14  Aligned_cols=222  Identities=18%  Similarity=0.265  Sum_probs=184.8

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-ccEEEEecc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-YNILVMELL-GPSLEDLFQYCSK-RFSLKTVLMLADQMI   77 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-~~~~v~e~~-~~~L~~~~~~~~~-~~~~~~~~~~~~~i~   77 (257)
                      ||+.......+.+.+|+.++++++ ||||+++++++.... ..++||||+ +++|.+++..... .++...+..++.|++
T Consensus       221 vK~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~  299 (450)
T 1k9a_A          221 VKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC  299 (450)
T ss_dssp             EEEESSCTTSHHHHHHHHHHHTCC-CTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHH
T ss_pred             EEEeCCchHHHHHHHHHHHHHhcc-CCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence            355555556778999999999998 999999999987654 789999999 9999999986543 479999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||.|||++|++||||||+||+++.+   +.+||+|||++.......      ....++..|+|||.+.+..++.++|||
T Consensus       300 ~~l~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~sDvw  370 (450)
T 1k9a_A          300 EAMEYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVW  370 (450)
T ss_dssp             HHHHHHHHTTEECSCCCGGGEEECTT---SCEEECCCTTCEECC------------CCCTTTSCHHHHHSSCCCHHHHHH
T ss_pred             HHHHHHHhCCeeCCCCCHhhEEECCC---CCEEEeeCCCcccccccc------cCCCCCcceeCHHHhcCCCCCcHHHHH
Confidence            99999999999999999999999866   899999999987543221      223567899999999999999999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       158 slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |||+++|+|++ |..||...........   +..+    .....+..+|+.+.++|.+||+.||++|||+.++++.|+++
T Consensus       371 slG~~l~el~t~g~~P~~~~~~~~~~~~---i~~~----~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i  443 (450)
T 1k9a_A          371 SFGILLWEIYSFGRVPYPRIPLKDVVPR---VEKG----YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI  443 (450)
T ss_dssp             HHHHHHHHHHTTTCCSSTTSCTTTHHHH---HHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHH---HHcC----CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            99999999998 9999998765544332   2221    12223367899999999999999999999999999999998


Q ss_pred             HHh
Q psy2769         237 LEN  239 (257)
Q Consensus       237 ~~~  239 (257)
                      ...
T Consensus       444 ~~~  446 (450)
T 1k9a_A          444 RTH  446 (450)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2e-41  Score=275.50  Aligned_cols=215  Identities=18%  Similarity=0.225  Sum_probs=177.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.++++++ ||||+++++++.+....++||||++++|.+.+......+++..+..++.|++.||.|||+.|++
T Consensus        63 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv  141 (311)
T 3niz_A           63 PSTAIREISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL  141 (311)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEECCSSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hHHHHHHHHHHHHcC-CCCEeeeeeEEccCCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            457889999999998 9999999999999999999999998899999986666799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||||+||+++.+   +.++|+|||++.........   .....+++.|+|||++.+ ..++.++||||+|+++|+|++
T Consensus       142 H~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~  215 (311)
T 3niz_A          142 HRDLKPQNLLINSD---GALKLADFGLARAFGIPVRS---YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT  215 (311)
T ss_dssp             CCCCCGGGEEECTT---CCEEECCCTTCEETTSCCC------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             cCCCchHhEEECCC---CCEEEccCcCceecCCCccc---ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHh
Confidence            99999999999876   88999999999876433221   144578999999999976 457999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhh----------------------CChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLT----------------------MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      |..||.+....+....+........+                      .......+.+++++.++|.+||+.||++|||+
T Consensus       216 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  295 (311)
T 3niz_A          216 GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISA  295 (311)
T ss_dssp             SSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCH
T ss_pred             CCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCH
Confidence            99999987666554443332211111                      01222335678899999999999999999999


Q ss_pred             HHHHH
Q psy2769         227 GKLRD  231 (257)
Q Consensus       227 ~~~~~  231 (257)
                      +++++
T Consensus       296 ~ell~  300 (311)
T 3niz_A          296 RDAMN  300 (311)
T ss_dssp             HHHHT
T ss_pred             HHHhc
Confidence            99875

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.7e-41  Score=277.58  Aligned_cols=212  Identities=16%  Similarity=0.222  Sum_probs=179.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++......++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        58 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i  135 (326)
T 2y0a_A           58 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHSLQI  135 (326)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTT-SSCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHh-cCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            457899999999998 999999999999999999999999 9999999974 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccC-CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRE-NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||||+||+++.+. ....++|+|||++........    .....+++.|+|||++.+..++.++||||||+++|+|+
T Consensus       136 vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  211 (326)
T 2y0a_A          136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL  211 (326)
T ss_dssp             ECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSC----CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             EcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCc----cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999998652 123799999999987643321    14457999999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+.   ...+.+..+...... ........+|+.+.++|.+||..||++|||++++++
T Consensus       212 ~g~~pf~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          212 SGASPFLGD---TKQETLANVSAVNYE-FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HSCCSSCCS---SHHHHHHHHHHTCCC-CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HCcCCCCCC---CHHHHHHHHHhcCCC-cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            999999874   333333444333322 233445688999999999999999999999999976

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.3e-41  Score=276.56  Aligned_cols=222  Identities=15%  Similarity=0.207  Sum_probs=185.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcC-----------------CCCHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSK-----------------RFSLKTVLM   71 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~-----------------~~~~~~~~~   71 (257)
                      .+.+.+|+.++.++.+||||+++++++...+..++||||+ +++|.+++.....                 .+++..+..
T Consensus        70 ~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (313)
T 1t46_A           70 REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS  149 (313)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHH
T ss_pred             HHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHH
Confidence            4678999999999966999999999999999999999999 8999999986432                 489999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCC
Q psy2769          72 LADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS  151 (257)
Q Consensus        72 ~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  151 (257)
                      ++.|++.||.+||+.|++|+||||+||+++.+   +.++|+|||++.......... ......+++.|+|||.+.+..++
T Consensus       150 ~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~  225 (313)
T 1t46_A          150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHG---RITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYT  225 (313)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT---TEEEECCCGGGSCTTSCTTSE-ECSSSEECGGGCCHHHHHHCCCC
T ss_pred             HHHHHHHHHHHHHHCCeecCCCccceEEEcCC---CCEEEccccccccccccccce-eccCCCCcceeeChHHhcCCCCC
Confidence            99999999999999999999999999999876   899999999987665442211 11344577889999999988899


Q ss_pred             CcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         152 PRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      .++||||||+++|+|++ |..||..........   ........   ......+|+.+.+++.+||+.||.+||++.+++
T Consensus       226 ~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  299 (313)
T 1t46_A          226 FESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY---KMIKEGFR---MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIV  299 (313)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH---HHHHHTCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhCCCCCCCcccchhHHH---HHhccCCC---CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence            99999999999999998 999998865443221   11111111   122256899999999999999999999999999


Q ss_pred             HHHHHHHHhcc
Q psy2769         231 DSFRNLLENKE  241 (257)
Q Consensus       231 ~~l~~~~~~~~  241 (257)
                      +.|++++.+..
T Consensus       300 ~~L~~~~~~~~  310 (313)
T 1t46_A          300 QLIEKQISEST  310 (313)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHhh
Confidence            99999998765

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=4.4e-42  Score=278.09  Aligned_cols=227  Identities=19%  Similarity=0.187  Sum_probs=183.2

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ...+.+.+|+.++..++ ||||+++++++...  ...++||||+ +++|.+++......+++..+..++.|++.||.+||
T Consensus        65 ~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH  143 (302)
T 4e5w_A           65 NHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG  143 (302)
T ss_dssp             CCHHHHHHHHHHHHTCC-CTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh
Confidence            34567899999999998 99999999999876  5689999999 89999999766778999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.|++|+||||+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++||||||+++|
T Consensus       144 ~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  220 (302)
T 4e5w_A          144 SRQYVHRDLAARNVLVESE---HQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH  220 (302)
T ss_dssp             HTTEECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred             cCCcccCCCchheEEEcCC---CCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHH
Confidence            9999999999999999877   8999999999987655433222334566888899999999988899999999999999


Q ss_pred             HHHhCCCCCCCCCC--------ccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         165 YFLRGKLPWQSIKS--------DNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       165 ~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      +|++|..|+.....        .........+............+..+|+.+.+++.+||+.||.+|||++++++.|+++
T Consensus       221 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  300 (302)
T 4e5w_A          221 ELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL  300 (302)
T ss_dssp             HHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence            99999988654210        0000011111122222222233467899999999999999999999999999999988


Q ss_pred             HH
Q psy2769         237 LE  238 (257)
Q Consensus       237 ~~  238 (257)
                      ++
T Consensus       301 l~  302 (302)
T 4e5w_A          301 LK  302 (302)
T ss_dssp             HC
T ss_pred             hC
Confidence            64

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=2.3e-41  Score=278.66  Aligned_cols=205  Identities=19%  Similarity=0.220  Sum_probs=171.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|..++.++.+||||+++++++.+....|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||
T Consensus        53 ~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~i  131 (345)
T 3a8x_A           53 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGI  131 (345)
T ss_dssp             HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            4568889999999866999999999999999999999999 9999999985 4679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.......   .......||+.|+|||++.+..++.++|+||||+++|+|++
T Consensus       132 vHrDlkp~NIll~~~---g~~kL~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  205 (345)
T 3a8x_A          132 IYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA  205 (345)
T ss_dssp             BCCCCCGGGEEECTT---SCEEECCGGGCBCSCCTT---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             eecCCCHHHEEECCC---CCEEEEeccccccccCCC---CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHh
Confidence            999999999999876   899999999987533221   12255689999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCc------cHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         169 GKLPWQSIKSD------NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       169 g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      |..||......      ........+.....     ..+..+++.+.++|.+||..||++||++
T Consensus       206 g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          206 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-----RIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             SSCTTTTTTC-------CHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCCCcCCcccccccccccHHHHHHHHHcCCC-----CCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            99999764221      11222233332222     2236789999999999999999999997

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-41  Score=280.65  Aligned_cols=224  Identities=17%  Similarity=0.184  Sum_probs=181.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcC----------------------CC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSK----------------------RF   64 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~----------------------~~   64 (257)
                      ...+.+.+|+.++.++.+||||+++++++...+..++||||+ +++|.+++.....                      .+
T Consensus        90 ~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  169 (344)
T 1rjb_A           90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL  169 (344)
T ss_dssp             --CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence            345679999999999966999999999999999999999999 9999999985432                      37


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhH
Q psy2769          65 SLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA  144 (257)
Q Consensus        65 ~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~  144 (257)
                      ++..+..++.|++.||.+||+.|++|+||||+||+++.+   +.++|+|||++......... .......+++.|+|||.
T Consensus       170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~  245 (344)
T 1rjb_A          170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSDSNY-VVRGNARLPVKWMAPES  245 (344)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT---TEEEECCCGGGSCGGGCTTS-EEETTEEECGGGCCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCC---CcEEeCCCccCcccccCccc-eeccCccCccCccCHHH
Confidence            899999999999999999999999999999999999876   89999999999765443221 11134456788999999


Q ss_pred             hcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         145 HQWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       145 ~~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      +.+..++.++||||||+++|+|++ |..||..........   ......   .....+..+|+.+.+++.+||+.||++|
T Consensus       246 ~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~R  319 (344)
T 1rjb_A          246 LFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY---KLIQNG---FKMDQPFYATEEIYIIMQSCWAFDSRKR  319 (344)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH---HHHHTT---CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHH---HHHhcC---CCCCCCCCCCHHHHHHHHHHcCCCchhC
Confidence            998889999999999999999998 999998865443221   111111   1122235689999999999999999999


Q ss_pred             CChHHHHHHHHHHHHhcc
Q psy2769         224 PNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       224 p~~~~~~~~l~~~~~~~~  241 (257)
                      |++.++++.|+.++....
T Consensus       320 ps~~~l~~~l~~~~~~~~  337 (344)
T 1rjb_A          320 PSFPNLTSFLGCQLADAE  337 (344)
T ss_dssp             CCHHHHHHHHHHHC----
T ss_pred             cCHHHHHHHHHHHHHHHH
Confidence            999999999999988654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.5e-41  Score=280.24  Aligned_cols=203  Identities=17%  Similarity=0.211  Sum_probs=175.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. ||||+++++++.+....|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||++|
T Consensus        84 ~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~  161 (350)
T 1rdq_E           84 QIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHSLD  161 (350)
T ss_dssp             CHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3457888999999997 999999999999999999999999 9999999985 467999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+||||||+||+++.+   +.++|+|||++......      .....||+.|+|||++.+..++.++|+||||+++|+|+
T Consensus       162 ivHrDlkp~NIll~~~---g~~kL~DFg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  232 (350)
T 1rdq_E          162 LIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGR------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA  232 (350)
T ss_dssp             EECCCCSGGGEEECTT---SCEEECCCTTCEECSSC------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             cccccCccceEEECCC---CCEEEcccccceeccCC------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHh
Confidence            9999999999999766   89999999999865432      14567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-----hHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-----YGKLR  230 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~~  230 (257)
                      +|..||...   +....+..+.......     +..+++.+.++|.+||+.||++||+     +++++
T Consensus       233 ~g~~Pf~~~---~~~~~~~~i~~~~~~~-----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~  292 (350)
T 1rdq_E          233 AGYPPFFAD---QPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK  292 (350)
T ss_dssp             HSSCSSCCS---SHHHHHHHHHHCCCCC-----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHH
T ss_pred             hCCCCCCCC---CHHHHHHHHHcCCCCC-----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHH
Confidence            999999874   3444445554443332     2678999999999999999999998     56554

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=6e-42  Score=280.45  Aligned_cols=220  Identities=15%  Similarity=0.192  Sum_probs=181.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++.++. ||||+++++++..+. .+++++++ +++|.+++......+++..+..++.|++.||.|||+.
T Consensus        59 ~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  136 (327)
T 3poz_A           59 KANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  136 (327)
T ss_dssp             -CHHHHHHHHHHHHHCC-BTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            34567899999999998 999999999998765 77899999 9999999997677899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++||||||+||+++.+   +.++|+|||++........... .....++..|+|||.+.+..++.++||||||+++|+|
T Consensus       137 ~ivH~Dikp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  212 (327)
T 3poz_A          137 RLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYH-AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL  212 (327)
T ss_dssp             TCCCSCCCGGGEEEEET---TEEEECCTTHHHHHTTTCC--------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CeeCCCCChheEEECCC---CCEEEccCcceeEccCCccccc-ccCCCccccccChHHhccCCCCchhhhhhhHHHHHHH
Confidence            99999999999999876   8999999999977654432221 1344567899999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ++ |..||...........+   ...    ........++..+.+++.+||+.||++||++.++++.|+++.+..
T Consensus       213 lt~g~~p~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~  280 (327)
T 3poz_A          213 MTFGSKPYDGIPASEISSIL---EKG----ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HTTSCCTTTTCCGGGHHHHH---HTT----CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HhcCCCCccCCCHHHHHHHH---HcC----CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence            99 99999886554432221   111    112223568899999999999999999999999999999988743

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.8e-42  Score=275.76  Aligned_cols=219  Identities=16%  Similarity=0.218  Sum_probs=182.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.++. ||||+++++++......++|||++ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        46 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  124 (268)
T 3sxs_A           46 SEDEFFQEAQTMMKLS-HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ  124 (268)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4567899999999998 999999999999999999999999 99999999876667999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||.+.........  ......+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       125 i~H~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  199 (268)
T 3sxs_A          125 FIHRDLAARNCLVDRD---LCVKVSDFGMTRYVLDDQYV--SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF  199 (268)
T ss_dssp             EEESSCSGGGEEECTT---CCEEECCTTCEEECCTTCEE--ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHH
T ss_pred             eecCCcCcceEEECCC---CCEEEccCccceecchhhhh--cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHH
Confidence            9999999999999766   89999999998765443211  113345677899999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      + |..||.....   ......+....    ....+..+|+.+.+++..||+.||++|||+.++++.|+++.++.
T Consensus       200 ~~g~~p~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (268)
T 3sxs_A          200 SLGKMPYDLYTN---SEVVLKVSQGH----RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD  266 (268)
T ss_dssp             TTTCCTTTTSCH---HHHHHHHHTTC----CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred             cCCCCCccccCh---HHHHHHHHcCC----CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence            9 9999987433   22222222221    11222567899999999999999999999999999998876543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.1e-41  Score=277.21  Aligned_cols=218  Identities=15%  Similarity=0.217  Sum_probs=183.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-----------------------CCCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-----------------------KRFS   65 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-----------------------~~~~   65 (257)
                      .+.+.+|+.+++++. ||||+++++++...+..++||||+ +++|.+++....                       ..++
T Consensus        70 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (314)
T 2ivs_A           70 LRDLLSEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT  148 (314)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEEC
T ss_pred             HHHHHHHHHHHhhCC-CCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcC
Confidence            457889999999997 999999999999999999999999 899999998642                       2388


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh
Q psy2769          66 LKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH  145 (257)
Q Consensus        66 ~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  145 (257)
                      +..+..++.|++.||.|||+.|++|+||||+||+++.+   +.++|+|||++.......... ......+++.|+|||.+
T Consensus       149 ~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~  224 (314)
T 2ivs_A          149 MGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG---RKMKISDFGLSRDVYEEDSYV-KRSQGRIPVKWMAIESL  224 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETT---TEEEECCCTTCEECTTTSCEE-CSSCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCC---CCEEEccccccccccccccce-eccCCCCcccccChhhh
Confidence            99999999999999999999999999999999999876   899999999988664432211 11344577889999999


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         146 QWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       146 ~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      .+..++.++||||||+++|+|++ |..||...........   +..    ......+..+|+.+.+++.+||+.||++||
T Consensus       225 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp  297 (314)
T 2ivs_A          225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNL---LKT----GHRMERPDNCSEEMYRLMLQCWKQEPDKRP  297 (314)
T ss_dssp             HHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH---HHT----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             cCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH---hhc----CCcCCCCccCCHHHHHHHHHHccCChhhCc
Confidence            98888999999999999999999 9999987654433221   111    112233367899999999999999999999


Q ss_pred             ChHHHHHHHHHHHHh
Q psy2769         225 NYGKLRDSFRNLLEN  239 (257)
Q Consensus       225 ~~~~~~~~l~~~~~~  239 (257)
                      +++++++.|++++.+
T Consensus       298 s~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          298 VFADISKDLEKMMVK  312 (314)
T ss_dssp             CHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHhh
Confidence            999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=9.8e-42  Score=278.98  Aligned_cols=220  Identities=14%  Similarity=0.164  Sum_probs=180.9

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++..+. ||||+++++++.. ...++|+||+ +++|.+++......+++..+..++.|++.||.|||+.
T Consensus        57 ~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  134 (325)
T 3kex_A           57 QSFQAVTDHMLAIGSLD-HAHIVRLLGLCPG-SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH  134 (325)
T ss_dssp             SCBCSCCHHHHHHHTCC-CTTBCCEEEEECB-SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCC-CCCcCeEEEEEcC-CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            44568899999999997 9999999999874 5689999999 9999999986556799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++||||||+||+++.+   +.++|+|||++........... .....++..|+|||.+.+..++.++||||||+++|+|
T Consensus       135 ~ivH~Dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el  210 (325)
T 3kex_A          135 GMVHRNLAARNVLLKSP---SQVQVADFGVADLLPPDDKQLL-YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWEL  210 (325)
T ss_dssp             TCCCSCCSSTTEEESSS---SCEEECSCSGGGGSCCCTTCCC------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCccchheEEECCC---CeEEECCCCcccccCccccccc-ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHH
Confidence            99999999999999766   8899999999987654432221 1445677899999999988999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ++ |..||...........   +...    .....+..++..+.+++.+||..||.+||++.++++.|+++.+..
T Consensus       211 ~~~g~~p~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~  278 (325)
T 3kex_A          211 MTFGAEPYAGLRLAEVPDL---LEKG----ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP  278 (325)
T ss_dssp             HTTSCCTTTTSCTTHHHHH---HHTT----CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred             HhCCCCCccccCHHHHHHH---HHcC----CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            99 9999998654433222   2111    122223567888999999999999999999999999999988654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=6.3e-42  Score=280.05  Aligned_cols=217  Identities=22%  Similarity=0.265  Sum_probs=160.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+.+||||+++++++.+....|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        49 ~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i  127 (325)
T 3kn6_A           49 EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK-KKHFSETEASYIMRKLVSAVSHMHDVGV  127 (325)
T ss_dssp             HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4568899999999988999999999999999999999999 8999999985 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.++....++|+|||++.........   .....+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       128 vH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  204 (325)
T 3kn6_A          128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP---LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS  204 (325)
T ss_dssp             ECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred             eecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc---ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHh
Confidence            99999999999987644458999999999765443211   144568999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCc----cHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSD----NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||......    ...+.+..+....... .......+|+.+.++|.+||..||++||+++++++
T Consensus       205 g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          205 GQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF-EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             SSCTTC-------CCCHHHHHHHHTTTCCCC-CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             CCCCCCCCccccccccHHHHHHHHHcCCCCC-CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            99999875432    2233334443333222 22334578999999999999999999999998863

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.7e-42  Score=300.34  Aligned_cols=230  Identities=17%  Similarity=0.256  Sum_probs=184.7

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++.++. ||||+++++++.. +..++||||+ +++|.+++......+++..+..++.|++.||.|||++
T Consensus       378 ~~~~~~~~E~~il~~l~-hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  455 (613)
T 2ozo_A          378 ADTEEMMREAQIMHQLD-NPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK  455 (613)
T ss_dssp             TTHHHHHHHHHHHTTCC-CTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            35678999999999997 9999999999976 4699999999 9999999975566799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++.................++..|+|||++.+..++.++||||||+++|||
T Consensus       456 ~iiHrDlkp~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~el  532 (613)
T 2ozo_A          456 NFVHRNLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA  532 (613)
T ss_dssp             TCCCSCCSGGGEEEEET---TEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CEEcCcCCHHHEEEcCC---CcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999876   899999999997654332221111233456789999999988999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCC
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEF  245 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~  245 (257)
                      ++ |..||........   ...+..+    .....+..+|+.+.++|..||+.||++||++.++++.|+++..... .+.
T Consensus       533 lt~G~~Pf~~~~~~~~---~~~i~~~----~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~-~~~  604 (613)
T 2ozo_A          533 LSYGQKPYKKMKGPEV---MAFIEQG----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA-SKV  604 (613)
T ss_dssp             HTTSCCTTTTCCSHHH---HHHHHTT----CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS-CSC
T ss_pred             HHCCCCCCCCCCHHHH---HHHHHcC----CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc-ccc
Confidence            98 9999998654432   2222222    1223336799999999999999999999999999999999988776 344


Q ss_pred             CCCcc
Q psy2769         246 DLRYD  250 (257)
Q Consensus       246 ~~~~~  250 (257)
                      +...+
T Consensus       605 ~~~s~  609 (613)
T 2ozo_A          605 EGGSA  609 (613)
T ss_dssp             CCSSS
T ss_pred             CCccc
Confidence            44433

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=6.7e-42  Score=281.77  Aligned_cols=220  Identities=19%  Similarity=0.273  Sum_probs=181.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-----------------------CCCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-----------------------KRFS   65 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-----------------------~~~~   65 (257)
                      .+.+.+|+.++.++. ||||+++++++......++||||+ +++|.+++....                       ..++
T Consensus        94 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  172 (343)
T 1luf_A           94 QADFQREAALMAEFD-NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS  172 (343)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCC
T ss_pred             HHHHHHHHHHHHhCC-CCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCC
Confidence            457899999999997 999999999999999999999999 899999998632                       5799


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh
Q psy2769          66 LKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH  145 (257)
Q Consensus        66 ~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  145 (257)
                      +..+..++.|++.||.|||++|++|+||||+||+++.+   +.++|+|||++......... .......+++.|+|||.+
T Consensus       173 ~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~  248 (343)
T 1luf_A          173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMPPESI  248 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCB-C----CCBCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCC---CeEEEeecCCCcccccCccc-cccCCCcccceecChhhh
Confidence            99999999999999999999999999999999999876   89999999998765432211 111345678899999999


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         146 QWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       146 ~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      .+..++.++||||||+++|+|++ |..||....   .......+....    ....+..+|+.+.+++.+||+.||++||
T Consensus       249 ~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rp  321 (343)
T 1luf_A          249 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA---HEEVIYYVRDGN----ILACPENCPLELYNLMRLCWSKLPADRP  321 (343)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC---HHHHHHHHHTTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC---hHHHHHHHhCCC----cCCCCCCCCHHHHHHHHHHcccCcccCC
Confidence            98889999999999999999999 999998743   233333332222    2223367899999999999999999999


Q ss_pred             ChHHHHHHHHHHHHhcc
Q psy2769         225 NYGKLRDSFRNLLENKE  241 (257)
Q Consensus       225 ~~~~~~~~l~~~~~~~~  241 (257)
                      ++.++++.|+++.....
T Consensus       322 s~~~~~~~L~~~~~~~~  338 (343)
T 1luf_A          322 SFCSIHRILQRMCERAE  338 (343)
T ss_dssp             CHHHHHHHHHHTTC---
T ss_pred             CHHHHHHHHHHHHhhhh
Confidence            99999999999887654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=9.7e-42  Score=274.58  Aligned_cols=221  Identities=22%  Similarity=0.331  Sum_probs=171.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++. ....++||||+ +++|.+++......+++..+..++.|++.||.+||+.|+
T Consensus        64 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i  141 (289)
T 3og7_A           64 LQAFKNEVGVLRKTR-HVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI  141 (289)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCcEEEEEeecc-CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            467899999999998 999999999764 45689999999 899999997656779999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~  165 (257)
                      +|+||||+||+++.+   +.++|+|||++.......... ......+++.|+|||.+.   +..++.++||||||+++|+
T Consensus       142 ~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e  217 (289)
T 3og7_A          142 IHRDLKSNNIFLHED---NTVKIGDFGLATEKSRWSGSH-QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE  217 (289)
T ss_dssp             CCSCCCGGGEEEETT---TEEEECCCC-------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHH
T ss_pred             ccccCccceEEECCC---CCEEEccceeccccccccccc-cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHH
Confidence            999999999999876   899999999987554322111 113456899999999997   5567889999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      |++|..||......  ......+...............+|+.+.+++.+||+.||++||+++++++.|+++.+
T Consensus       218 l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          218 LMTGQLPYSNINNR--DQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHSSCTTSSCCCH--HHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHCCCCccccchH--HHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            99999999875433  222333333333333444456789999999999999999999999999999998764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.7e-41  Score=279.08  Aligned_cols=216  Identities=19%  Similarity=0.205  Sum_probs=182.3

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ....+|+.++.++.+||||+++++++.++...|+||||+ |++|.+.+.. ...+++..+..++.|++.||.|||+.|++
T Consensus        60 ~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~giv  138 (342)
T 2qr7_A           60 RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR-QKFFSEREASAVLFTITKTVEYLHAQGVV  138 (342)
T ss_dssp             CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-CTTCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence            457889999999977999999999999999999999999 9999999984 56799999999999999999999999999


Q ss_pred             ccCCCCCceEeecc-CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~-~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      ||||||+||++..+ +..+.++|+|||++........   ......+++.|+|||++.+..++.++||||||+++|+|++
T Consensus       139 HrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  215 (342)
T 2qr7_A          139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG---LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT  215 (342)
T ss_dssp             CSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC---CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC---ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhc
Confidence            99999999998643 2235699999999987644322   1245678999999999988778899999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.........+....+........ ...+..+|+.+.++|++||..||++||++.++++
T Consensus       216 g~~Pf~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          216 GYTPFANGPDDTPEEILARIGSGKFSLS-GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             SSCSSCSSTTSCHHHHHHHHHHCCCCCC-STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHccCCcccC-ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9999987655566666666655544332 2233578999999999999999999999999876

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.5e-42  Score=276.29  Aligned_cols=219  Identities=15%  Similarity=0.232  Sum_probs=183.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.++. ||||+++++++......++||||+ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        62 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  140 (283)
T 3gen_A           62 SEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ  140 (283)
T ss_dssp             CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHhcCC-CCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4567899999999998 999999999999999999999999 99999999865677999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||.+........  .......+++.|+|||.+.+..++.++||||+|+++|+|+
T Consensus       141 i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~  215 (283)
T 3gen_A          141 FLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDEY--TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY  215 (283)
T ss_dssp             CCCSSCSGGGEEECTT---SCEEECSTTGGGGBCCHHH--HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCccceEEEcCC---CCEEEcccccccccccccc--ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999766   8899999999875533211  1113345677899999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      + |..||......   .....+....    ....+..+++.+.+++.+||+.||++||+++++++.|++++++.
T Consensus       216 t~g~~p~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e  282 (283)
T 3gen_A          216 SLGKMPYERFTNS---ETAEHIAQGL----RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE  282 (283)
T ss_dssp             TTTCCTTTTSCHH---HHHHHHHTTC----CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             hCCCCCccccChh---HHHHHHhccc----CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence            8 99999875432   3233333221    11222567899999999999999999999999999999998754

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.3e-41  Score=272.66  Aligned_cols=219  Identities=16%  Similarity=0.217  Sum_probs=180.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.++ ||||+++++++..+ ..++|||++ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        56 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  133 (281)
T 3cc6_A           56 NKEKFMSEAVIMKNLD-HPHIVKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN  133 (281)
T ss_dssp             HHHHHHHHHHHHHHHC-CTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCcceEEEEEcCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3567889999999998 99999999998754 578999999 89999999876677999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++.........  ......+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       134 i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll  208 (281)
T 3cc6_A          134 CVHRDIAVRNILVASP---ECVKLGDFGLSRYIEDEDYY--KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEIL  208 (281)
T ss_dssp             CCCCCCSGGGEEEEET---TEEEECCCCGGGCC-----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCccceEEECCC---CcEEeCccCCCccccccccc--ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHH
Confidence            9999999999999876   89999999998765443211  113345678899999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      + |..||...........   +...    .....+..+|+.+.+++.+||+.||++||++.++++.|+++.....
T Consensus       209 t~g~~p~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  276 (281)
T 3cc6_A          209 SFGKQPFFWLENKDVIGV---LEKG----DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK  276 (281)
T ss_dssp             TTTCCTTTTSCGGGHHHH---HHHT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCcccCChHHHHHH---HhcC----CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence            8 9999987655443322   2221    1112235689999999999999999999999999999999987654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.9e-41  Score=271.88  Aligned_cols=223  Identities=18%  Similarity=0.240  Sum_probs=177.9

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS--KRFSLKTVLMLADQMIS   78 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~   78 (257)
                      |+.......+.+.+|+.+++++. ||||+++++++.+  ..++||||+ +++|.+++....  ..++...+..++.|++.
T Consensus        37 K~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~--~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~  113 (307)
T 2eva_A           37 KQIESESERKAFIVELRQLSRVN-HPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQ  113 (307)
T ss_dssp             EECSSTTHHHHHHHHHHHHHHCC-CTTBCCEEEBCTT--TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHH
T ss_pred             EEecChhHHHHHHHHHHHHhcCC-CCCcCeEEEEEcC--CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHH
Confidence            45455566778999999999998 9999999998873  489999999 999999998532  24789999999999999


Q ss_pred             HHHHHHh---CCccccCCCCCceEeeccCCCC-eEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcc
Q psy2769          79 RLEHVHR---KKIVHRDIKPDNFLMGVRENFN-TVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRD  154 (257)
Q Consensus        79 ~l~~lh~---~~i~H~dl~~~nili~~~~~~~-~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~  154 (257)
                      ||.|||+   .|++|+||||+||+++.+   + .++|+|||++.......      ....+++.|+|||.+.+..++.++
T Consensus       114 ~l~~LH~~~~~~ivH~dlkp~NIll~~~---~~~~kl~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~  184 (307)
T 2eva_A          114 GVAYLHSMQPKALIHRDLKPPNLLLVAG---GTVLKICDFGTACDIQTHM------TNNKGSAAWMAPEVFEGSNYSEKC  184 (307)
T ss_dssp             HHHHHHTCSSSCCCCCCCSGGGEEEETT---TTEEEECCCCC------------------CCTTSSCHHHHTCCCCCTHH
T ss_pred             HHHHHHhCCCCCeecCCCChhHEEEeCC---CCEEEEccccccccccccc------ccCCCCCceEChhhhCCCCCCcHH
Confidence            9999999   899999999999999865   4 48999999986543321      344689999999999998999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      ||||||+++|+|++|..||........ .....    ......+.....+|+.+.+++.+||+.||++||+++++++.|+
T Consensus       185 Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~  259 (307)
T 2eva_A          185 DVFSWGIILWEVITRRKPFDEIGGPAF-RIMWA----VHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT  259 (307)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTTTCSSHH-HHHHH----HHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCchhhCccHH-HHHHH----HhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence            999999999999999999987544322 11111    1122233344678999999999999999999999999999999


Q ss_pred             HHHHhcc
Q psy2769         235 NLLENKE  241 (257)
Q Consensus       235 ~~~~~~~  241 (257)
                      ++.+...
T Consensus       260 ~~~~~~~  266 (307)
T 2eva_A          260 HLMRYFP  266 (307)
T ss_dssp             HHGGGCC
T ss_pred             HHHHhcc
Confidence            9987664

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=6e-41  Score=273.25  Aligned_cols=204  Identities=20%  Similarity=0.247  Sum_probs=175.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|..++..+. ||||+++++++.+....|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||++|
T Consensus        49 ~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~  126 (318)
T 1fot_A           49 QVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLHSKD  126 (318)
T ss_dssp             CHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHhhCC-CCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456788999999997 999999999999999999999999 9999999985 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.+   +.++|+|||++......      .....||+.|+|||++.+..++.++|+||||+++|+|+
T Consensus       127 ivHrDlkp~NIll~~~---g~~kL~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  197 (318)
T 1fot_A          127 IIYRDLKPENILLDKN---GHIKITDFGFAKYVPDV------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML  197 (318)
T ss_dssp             EECCCCCGGGEEECTT---SCEEECCCSSCEECSSC------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHH
T ss_pred             ccccCCChheEEEcCC---CCEEEeecCcceecCCc------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHH
Confidence            9999999999999766   89999999999765332      14567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      +|..||...   +....+..+.......     +..+++.+.++|.+||..||++||     +++++++
T Consensus       198 ~g~~pf~~~---~~~~~~~~i~~~~~~~-----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          198 AGYTPFYDS---NTMKTYEKILNAELRF-----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HSSCTTCCS---SHHHHHHHHHHCCCCC-----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             hCCCCCCCC---CHHHHHHHHHhCCCCC-----CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            999999873   3344444444433322     267899999999999999999999     6776653

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.6e-41  Score=273.50  Aligned_cols=219  Identities=17%  Similarity=0.268  Sum_probs=181.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++ ..+..++|||++ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        62 ~~~~~~e~~~l~~l~-h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i  138 (291)
T 1xbb_A           62 KDELLAEANVMQQLD-NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESNF  138 (291)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHh-CcCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            567899999999997 99999999999 456789999999 8999999985 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.................+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       139 ~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  215 (291)
T 1xbb_A          139 VHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS  215 (291)
T ss_dssp             ECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             EcCCCCcceEEEeCC---CcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHh
Confidence            999999999999877   89999999999876544322211133446788999999998888999999999999999999


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                       |..||.....   ......+..    ......+..+|+.+.+++.+||+.||++||++.++++.|++++.+..
T Consensus       216 ~g~~p~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  282 (291)
T 1xbb_A          216 YGQKPYRGMKG---SEVTAMLEK----GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  282 (291)
T ss_dssp             TTCCSSTTCCH---HHHHHHHHT----TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCH---HHHHHHHHc----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence             9999987533   222222222    12223346789999999999999999999999999999999998654

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=3.5e-41  Score=274.80  Aligned_cols=214  Identities=19%  Similarity=0.205  Sum_probs=174.5

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS-----KRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ...+.+.+|+.+++++. ||||+++++++..++..++||||+.++|.+++....     ..+++..+..++.|++.||.|
T Consensus        45 ~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~  123 (317)
T 2pmi_A           45 GTPSTAIREISLMKELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF  123 (317)
T ss_dssp             CSCHHHHHHHHHHTTCC-BTTBCCEEEEECCTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhcC-CCCcceEEEEEEECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHH
Confidence            34567889999999998 999999999999999999999999889999998642     468999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCY  161 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~  161 (257)
                      ||+.|++|+||||+||+++.+   +.++|+|||++.........   .....+++.|+|||++.+. .++.++||||||+
T Consensus       124 lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~  197 (317)
T 2pmi_A          124 CHENKILHRDLKPQNLLINKR---GQLKLGDFGLARAFGIPVNT---FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGC  197 (317)
T ss_dssp             HHHTTEECCCCCGGGEEECTT---CCEEECCCSSCEETTSCCCC---CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred             HHHCCeeeCCCChHHeEEcCC---CCEEECcCccceecCCCccc---CCCCcccccccCchHhhCCCCCCcHHHHHHHHH
Confidence            999999999999999999876   89999999999876433211   1445789999999999864 5799999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC-----------------------------hhhhhcCCcHHHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-----------------------------PEAICEGTPPEFAEFL  212 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~li  212 (257)
                      ++|+|++|..||.+....   ..+..+........                             .+.....+++.+.++|
T Consensus       198 il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  274 (317)
T 2pmi_A          198 ILAEMITGKPLFPGTNDE---EQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFL  274 (317)
T ss_dssp             HHHHHHHSSCSCCCSSHH---HHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHH
Confidence            999999999999875432   33333322211000                             0111236788999999


Q ss_pred             HHHhcCCCCCCCChHHHHH
Q psy2769         213 RYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       213 ~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .+||..||++|||++++++
T Consensus       275 ~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          275 HGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             HHHSCSSGGGSCCHHHHTT
T ss_pred             HHHCCCCcccCCCHHHHhC
Confidence            9999999999999999875

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.8e-41  Score=281.75  Aligned_cols=226  Identities=23%  Similarity=0.296  Sum_probs=182.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|..++..+. ||||+++++++.+....|+||||+ |++|.+++...+..+++..+..++.|++.||.|||+.|
T Consensus       104 ~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g  182 (412)
T 2vd5_A          104 EVSCFREERDVLVNGD-RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG  182 (412)
T ss_dssp             GGCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcC-CCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3456889999999997 999999999999999999999999 99999999865668999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-------CCCCCCcchHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-------WLDQSPRDDLEALC  160 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-------~~~~~~~~Dv~slg  160 (257)
                      |+||||||+||+++.+   +.+||+|||++........  .......||+.|+|||++.       +..++.++|+||||
T Consensus       183 iiHrDLKp~NILld~~---g~vkL~DFGla~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlG  257 (412)
T 2vd5_A          183 YVHRDIKPDNILLDRC---GHIRLADFGSCLKLRADGT--VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALG  257 (412)
T ss_dssp             EECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSC--EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHH
T ss_pred             eeecccCHHHeeecCC---CCEEEeechhheeccCCCc--cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHh
Confidence            9999999999999876   8999999999987644321  1113467999999999997       34678999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC---ChHHHHHHHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP---NYGKLRDSFRNLL  237 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp---~~~~~~~~l~~~~  237 (257)
                      +++|||++|..||...   +..+.+..+.........+.....+|+.+.++|++||. +|.+|+   +++++++      
T Consensus       258 vilyelltG~~Pf~~~---~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~------  327 (412)
T 2vd5_A          258 VFAYEMFYGQTPFYAD---STAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT------  327 (412)
T ss_dssp             HHHHHHHHSSCTTCCS---SHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT------
T ss_pred             HHHHHHHhCCCCCCCC---CHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc------
Confidence            9999999999999874   34444555554443333333446799999999999998 999985   6776642      


Q ss_pred             HhccccCCCCCccccccc
Q psy2769         238 ENKERCEFDLRYDWTLLE  255 (257)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~  255 (257)
                           ..+-..+||+.|.
T Consensus       328 -----Hpff~~i~w~~l~  340 (412)
T 2vd5_A          328 -----HPFFFGLDWDGLR  340 (412)
T ss_dssp             -----SGGGTTCCSTTST
T ss_pred             -----CCCcCCCCHHHHh
Confidence                 2233456776654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3e-41  Score=276.91  Aligned_cols=222  Identities=15%  Similarity=0.202  Sum_probs=183.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-------------cCCCCHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-------------SKRFSLKTVLMLADQ   75 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-------------~~~~~~~~~~~~~~~   75 (257)
                      .+.+.+|+.++..+.+||||+++++++...+..++||||+ +++|.+++...             ...++...+..++.|
T Consensus        93 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q  172 (333)
T 2i1m_A           93 KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ  172 (333)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHH
Confidence            4578899999999955999999999999999999999999 88999999854             245899999999999


Q ss_pred             HHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcch
Q psy2769          76 MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDD  155 (257)
Q Consensus        76 i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~D  155 (257)
                      ++.||.+||+.|++|+||||+||+++.+   +.++|+|||++......... .......+++.|+|||.+.+..++.++|
T Consensus       173 i~~~l~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~D  248 (333)
T 2i1m_A          173 VAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIMNDSNY-IVKGNARLPVKWMAPESIFDCVYTVQSD  248 (333)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGCEEEGG---GEEEBCCCGGGCCGGGCTTS-EECSSCEECGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHhcCCcccCCcccceEEECCC---CeEEECccccccccccccce-eecCCCCCCccccCHHHhccCCCChHHH
Confidence            9999999999999999999999999876   89999999999765443221 1113445678899999999888999999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         156 LEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       156 v~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |||||+++|+|++ |..||.........   .........   ...+..+|+.+.+++..||+.||.+||++.++++.|+
T Consensus       249 i~slG~il~el~t~g~~p~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~  322 (333)
T 2i1m_A          249 VWSYGILLWEIFSLGLNPYPGILVNSKF---YKLVKDGYQ---MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ  322 (333)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCSSHHH---HHHHHHTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCcccchhHHH---HHHHhcCCC---CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence            9999999999998 99999876544322   122222111   1223567899999999999999999999999999999


Q ss_pred             HHHHhcc
Q psy2769         235 NLLENKE  241 (257)
Q Consensus       235 ~~~~~~~  241 (257)
                      ++..+..
T Consensus       323 ~~~~~~~  329 (333)
T 2i1m_A          323 EQAQEDR  329 (333)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhhh
Confidence            9887654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.1e-41  Score=272.55  Aligned_cols=212  Identities=17%  Similarity=0.222  Sum_probs=171.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.+++++. ||||+++++++...+..++|||++.++|.+++......+++..+..++.|++.||.|||+.|++
T Consensus        44 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~  122 (288)
T 1ob3_A           44 PSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL  122 (288)
T ss_dssp             CHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             chhHHHHHHHHHhcC-CCCEeeeeeEEccCCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence            467889999999998 9999999999999999999999997799999986667899999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||||+||+++.+   +.++|+|||++........   ......+++.|+|||++.+. .++.++||||||+++|+|++
T Consensus       123 H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  196 (288)
T 1ob3_A          123 HRDLKPQNLLINRE---GELKIADFGLARAFGIPVR---KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN  196 (288)
T ss_dssp             CSCCCGGGEEECTT---SCEEECCTTHHHHHCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHEEEcCC---CCEEEeECccccccCcccc---ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHh
Confidence            99999999999866   8999999999876543211   11345689999999999764 47999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhh------------------------CChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLT------------------------MTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |..||.....   ...+..+......                        .........+++.+.++|.+||+.||++||
T Consensus       197 g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  273 (288)
T 1ob3_A          197 GTPLFPGVSE---ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI  273 (288)
T ss_dssp             SSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             CCCCCCCCCH---HHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCC
Confidence            9999987533   2223333222111                        011223356889999999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      |++++++
T Consensus       274 t~~e~l~  280 (288)
T 1ob3_A          274 TAKQALE  280 (288)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9998865

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-41  Score=278.58  Aligned_cols=220  Identities=15%  Similarity=0.202  Sum_probs=177.7

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++.++. ||||+++++++..+. .+++++++ +++|.+++......+++..+..++.|++.||.|||+.
T Consensus        59 ~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  136 (327)
T 3lzb_A           59 KANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  136 (327)
T ss_dssp             CCHHHHHHHHHHHTTCC-BTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            34567899999999998 999999999998765 78889998 9999999997677899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++........... .....+++.|+|||.+.+..++.++||||||+++|+|
T Consensus       137 ~ivH~Dikp~NIl~~~~---~~~kL~DfG~a~~~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el  212 (327)
T 3lzb_A          137 RLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYH-AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL  212 (327)
T ss_dssp             TCCCSCCCGGGEEEEET---TEEEECCTTC-----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCHHHEEEcCC---CCEEEccCcceeEccCcccccc-ccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHH
Confidence            99999999999999876   8999999999976544322211 1334567889999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ++ |..||...........+   ...    ........+++.+.+++++||+.||.+||++.++++.|+++..+.
T Consensus       213 l~~g~~p~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          213 MTFGSKPYDGIPASEISSIL---EKG----ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HTTSCCTTTTCCGGGHHHHH---HTT----CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HHCCCCCCCCCCHHHHHHHH---HcC----CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence            99 99999886554432221   111    112223568999999999999999999999999999999998654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.8e-41  Score=279.96  Aligned_cols=221  Identities=18%  Similarity=0.180  Sum_probs=166.2

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      |+.......+.+.+|+.++.++. ||||+++++++......++||||+ +++|.+++.. ...+++..+..++.|++.||
T Consensus        84 K~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~L  161 (349)
T 2w4o_A           84 KVLKKTVDKKIVRTEIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVE-KGYYSERDAADAVKQILEAV  161 (349)
T ss_dssp             EEEEC----------CHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTT-CSSCCHHHHHHHHHHHHHHH
T ss_pred             EEeccchhHHHHHHHHHHHHhCC-CCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Confidence            44444445567889999999998 999999999999999999999999 8999999874 56699999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .|||+.|++|+||||+||+++....++.++|+|||++.......    ......|++.|+|||++.+..++.++||||||
T Consensus       162 ~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  237 (349)
T 2w4o_A          162 AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV----LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVG  237 (349)
T ss_dssp             HHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------------------CGGGSCHHHHTTCCCCTHHHHHHHH
T ss_pred             HHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc----ccccccCCCCccCHHHhcCCCCCcccchHHHH
Confidence            99999999999999999999864345899999999987653321    11345789999999999998999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +++|+|++|..||......  ......+....... .......++..+.++|++||..||++||++.++++
T Consensus       238 ~il~ell~g~~pf~~~~~~--~~~~~~i~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          238 IITYILLCGFEPFYDERGD--QFMFRRILNCEYYF-ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHHHHHHSSCTTCCTTCH--HHHHHHHHTTCCCC-CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCccc--HHHHHHHHhCCCcc-CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999864332  22333333322222 22334678999999999999999999999999876

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=4.7e-41  Score=282.16  Aligned_cols=212  Identities=18%  Similarity=0.220  Sum_probs=177.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++..+. ||||+++++++.+....|+||||+ |++|.+++.  ...+++..+..++.|++.||.|||++
T Consensus       111 ~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~--~~~~~e~~~~~~~~qi~~aL~~LH~~  187 (410)
T 3v8s_A          111 SDSAFFWEERDIMAFAN-SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS--NYDVPEKWARFYTAEVVLALDAIHSM  187 (410)
T ss_dssp             CCCSTHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34556889999999997 999999999999999999999999 999999998  45799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC----CCCcchHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD----QSPRDDLEALCYT  162 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~----~~~~~Dv~slg~~  162 (257)
                      ||+||||||+||+++.+   +.+||+|||++........  .......||+.|+|||++.+..    ++.++||||||++
T Consensus       188 givHrDLKp~NILl~~~---g~ikL~DFG~a~~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi  262 (410)
T 3v8s_A          188 GFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF  262 (410)
T ss_dssp             TEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSE--EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred             CeEeccCCHHHeeECCC---CCEEEeccceeEeeccCCc--ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence            99999999999999876   8999999999976544321  1124567999999999998765    6789999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCC--CCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE--EPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp~~~~~~~  231 (257)
                      +|+|++|..||.+.   +....+..+.........+. ...+|+.+.++|.+||..+|.+  ||+++++++
T Consensus       263 lyell~G~~Pf~~~---~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          263 LYEMLVGDTPFYAD---SLVGTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HHHHHHSSCTTCCS---SHHHHHHHHHTHHHHCCCCT-TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             HHHHHhCCCCCCCC---ChhhHHHHHHhccccccCCC-cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            99999999999873   44444555554433322221 1468999999999999999988  999998764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.7e-41  Score=280.67  Aligned_cols=224  Identities=20%  Similarity=0.191  Sum_probs=174.2

Q ss_pred             ccccHHHHHHH-HHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFY-EKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~-~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+|..++ +.+. ||||+++++++.+.+..|+||||+ |++|.+++.. ...+++..+..++.|++.||.|||++|
T Consensus        82 ~~~~~~e~~~ll~~~~-hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~g  159 (373)
T 2r5t_A           82 EKHIMSERNVLLKNVK-HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLN  159 (373)
T ss_dssp             ---------CCBCCCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34566677664 4455 999999999999999999999999 9999999985 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+||||||+||+++.+   +.++|+|||++........   ......||+.|+|||++.+..++.++|+||||+++|+|+
T Consensus       160 ivHrDlkp~NIll~~~---g~ikL~DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  233 (373)
T 2r5t_A          160 IVYRDLKPENILLDSQ---GHIVLTDFGLCKENIEHNS---TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML  233 (373)
T ss_dssp             CCCCCCCGGGEEECTT---SCEEECCCCBCGGGBCCCC---CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             ceecCCCHHHEEECCC---CCEEEeeCccccccccCCC---ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHH
Confidence            9999999999999876   8999999999875332211   225567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCCC
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDL  247 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~~  247 (257)
                      +|..||...   +..+....+.......     ...+++.+.++|.+||..||.+||++.+..   ++++.    ..+-.
T Consensus       234 ~G~~Pf~~~---~~~~~~~~i~~~~~~~-----~~~~~~~~~~li~~lL~~dp~~R~~~~~~~---~~i~~----h~~f~  298 (373)
T 2r5t_A          234 YGLPPFYSR---NTAEMYDNILNKPLQL-----KPNITNSARHLLEGLLQKDRTKRLGAKDDF---MEIKS----HVFFS  298 (373)
T ss_dssp             HSSCTTCCS---BHHHHHHHHHHSCCCC-----CSSSCHHHHHHHHHHTCSSGGGSTTTTTTH---HHHHT----SGGGT
T ss_pred             cCCCCCCCC---CHHHHHHHHHhcccCC-----CCCCCHHHHHHHHHHcccCHHhCCCCCCCH---HHHhC----Ccccc
Confidence            999999873   4444455554433322     267899999999999999999999986332   22222    22444


Q ss_pred             Ccccccccc
Q psy2769         248 RYDWTLLER  256 (257)
Q Consensus       248 ~~~~~~~~~  256 (257)
                      ..||+.|.+
T Consensus       299 ~~~w~~l~~  307 (373)
T 2r5t_A          299 LINWDDLIN  307 (373)
T ss_dssp             TCCHHHHHT
T ss_pred             CCCHHHHHh
Confidence            567776654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.3e-40  Score=271.94  Aligned_cols=210  Identities=20%  Similarity=0.292  Sum_probs=176.6

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++.+++ ||||+++++++......++||||+ +++|.+++.  ...+++..+..++.|++.||.|||+.
T Consensus        84 ~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~l~~~~~~~i~~qi~~~L~~LH~~  160 (321)
T 2c30_A           84 QRRELLFNEVVIMRDYQ-HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS--QVRLNEEQIATVCEAVLQALAYLHAQ  160 (321)
T ss_dssp             CSHHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567889999999998 999999999999999999999999 999999887  46799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++.........   .....|++.|+|||.+.+..++.++||||||+++|+|
T Consensus       161 ~ivH~Dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el  234 (321)
T 2c30_A          161 GVIHRDIKSDSILLTLD---GRVKLSDFGFCAQISKDVPK---RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM  234 (321)
T ss_dssp             TEECCCCSGGGEEECTT---CCEEECCCTTCEECCSSSCC---BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CeecCCCCHHHEEECCC---CcEEEeeeeeeeecccCccc---cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence            99999999999999866   88999999998776543221   1456799999999999998899999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   .......+.....+  .......+++.+.+++.+||+.||++||+++++++
T Consensus       235 ~~g~~pf~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          235 VDGEPPYFSDS---PVQAMKRLRDSPPP--KLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHSSCTTTTSC---HHHHHHHHHHSSCC--CCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhCCCCCCCCC---HHHHHHHHhcCCCC--CcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999998743   33333333322211  11223568899999999999999999999999876

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.6e-41  Score=272.93  Aligned_cols=221  Identities=20%  Similarity=0.328  Sum_probs=185.9

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+.+|+.++++++ ||||+++++++.+....++|||++ +++|.+++... ...+++..+..++.|++.||.+||+
T Consensus        51 ~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  129 (288)
T 3kfa_A           51 MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK  129 (288)
T ss_dssp             THHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH
Confidence            34577899999999998 999999999999999999999999 89999999864 4569999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||+|+||+++.+   +.++|+|||.+........  .......+++.|+|||.+.+..++.++||||||+++|+
T Consensus       130 ~~i~H~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  204 (288)
T 3kfa_A          130 KNFIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE  204 (288)
T ss_dssp             HTCCCSCCSGGGEEECGG---GCEEECCCCGGGTSCSSSS--EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCcceEEEcCC---CCEEEccCccceeccCCcc--ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHH
Confidence            999999999999999876   8899999999876543321  11133456778999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |++ |..||...........+.   .    ......+..+|+.+.+++..||+.||.+||+++++++.|++++.+..
T Consensus       205 ll~~g~~p~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~  274 (288)
T 3kfa_A          205 IATYGMSPYPGIDLSQVYELLE---K----DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS  274 (288)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHH---T----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHh---c----cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            999 999998865444322221   1    11222336789999999999999999999999999999999998665

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.6e-41  Score=270.06  Aligned_cols=218  Identities=16%  Similarity=0.230  Sum_probs=182.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.+++ ||||+++++++...+..+++||++ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        46 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  124 (267)
T 3t9t_A           46 SEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC  124 (267)
T ss_dssp             CHHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHhCC-CCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4467899999999998 999999999999999999999999 89999999876677999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+........  .......++..|+|||.+.+..++.++||||||+++|+|+
T Consensus       125 i~H~dl~p~Nili~~~---~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  199 (267)
T 3t9t_A          125 VIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQY--TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF  199 (267)
T ss_dssp             CCCSSCCGGGEEECGG---GCEEECCTTGGGGBCCHHH--HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccCCCchheEEECCC---CCEEEcccccccccccccc--cccccccccccccChhhhcCCCccchhchhhhHHHHHHHh
Confidence            9999999999999876   8899999999875533211  1113345678899999999888999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      + |..||....   .......+....    ....+..+++.+.+++.+||+.||++||++.++++.|+++.+.
T Consensus       200 ~~g~~p~~~~~---~~~~~~~i~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          200 SEGKIPYENRS---NSEVVEDISTGF----RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             TTSCCTTTTCC---HHHHHHHHHTTC----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccCCCCCCCCC---HHHHHHHHhcCC----cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            9 899998743   223233332221    1122356789999999999999999999999999999998764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=5.8e-41  Score=283.62  Aligned_cols=214  Identities=19%  Similarity=0.213  Sum_probs=180.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|..++..+. ||||+++++++.+....|+||||+ +++|.+++......+++..+..++.|++.||.|||+.|
T Consensus       117 ~~~~~~~E~~il~~~~-hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g  195 (437)
T 4aw2_A          117 ETACFREERDVLVNGD-SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH  195 (437)
T ss_dssp             TTCCHHHHHHHHHHSC-TTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456899999999997 999999999999999999999999 99999999865678999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcchHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDDLEALCYT  162 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slg~~  162 (257)
                      |+||||||+||+++.+   +.+||+|||++.........  ......||+.|+|||++.     ...++.++||||||++
T Consensus       196 iiHrDLKp~NILl~~~---g~vkL~DFGla~~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvi  270 (437)
T 4aw2_A          196 YVHRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGTV--QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC  270 (437)
T ss_dssp             EECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSCE--ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHH
T ss_pred             eEecccCHHHeeEcCC---CCEEEcchhhhhhcccCCCc--ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHH
Confidence            9999999999999876   89999999999765443211  113467999999999997     4567899999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCC--CCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE--EPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~--Rp~~~~~~~  231 (257)
                      +|||++|..||.+.   +..+.+..+.........+.....+++.+.++|++||..+|++  ||+++++++
T Consensus       271 l~elltG~~Pf~~~---~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          271 MYEMLYGETPFYAE---SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHHHSSCTTCCS---SHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             HHHHHhCCCCCCCC---ChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            99999999999873   4444555555444444444444568999999999999888888  999988764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-41  Score=283.16  Aligned_cols=222  Identities=17%  Similarity=0.242  Sum_probs=174.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeee-eCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGT-SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+++.+|+.+++++. ||||+++++++. .++..++||||+ +++|.+++......++...+..++.|++.||.|||+.
T Consensus       133 ~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  211 (373)
T 3c1x_A          133 EVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK  211 (373)
T ss_dssp             HHHHHHHHHTTSTTCC-CTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3567899999999997 999999999864 456789999999 8999999986566789999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      |++||||||+||+++.+   +.+||+|||++.......... .......+++.|+|||.+.+..++.++||||||+++|+
T Consensus       212 ~ivHrDlkp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~e  288 (373)
T 3c1x_A          212 KFVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE  288 (373)
T ss_dssp             TCCCSCCCGGGEEECTT---CCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CEecCccchheEEECCC---CCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHH
Confidence            99999999999999766   899999999987654322111 11133456788999999999899999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |++ |.+||......+....   +....    ....+..+|+.+.+++.+||+.||++||++.++++.|++++....
T Consensus       289 llt~~~~p~~~~~~~~~~~~---~~~~~----~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          289 LMTRGAPPYPDVNTFDITVY---LLQGR----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             HHTTSCCSCTTSCSSCHHHH---HHTTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHhCcCCCCCCCCHHHHHHH---HHcCC----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            999 7888887655543322   22221    112235789999999999999999999999999999999998765

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.7e-41  Score=276.02  Aligned_cols=221  Identities=14%  Similarity=0.229  Sum_probs=173.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCcc------EEEEecc-CCCHHHHHHHhc-----CCCCHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYN------ILVMELL-GPSLEDLFQYCS-----KRFSLKTVLMLADQM   76 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~------~~v~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~~~~i   76 (257)
                      ..+.+.+|+.+++++. ||||+++++++......      +++|||+ +++|.+++....     ..+++..+..++.|+
T Consensus        68 ~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi  146 (323)
T 3qup_A           68 DIEEFLREAACMKEFD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI  146 (323)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCC-CCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHH
Confidence            3567899999999997 99999999999876554      9999999 999999997542     259999999999999


Q ss_pred             HHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchH
Q psy2769          77 ISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL  156 (257)
Q Consensus        77 ~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv  156 (257)
                      +.||.|||+.|++|+||||+||+++.+   +.++|+|||++............ ....+++.|+|||.+.+..++.++||
T Consensus       147 ~~al~~LH~~~ivH~Dikp~NIli~~~---~~~kl~Dfg~a~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di  222 (323)
T 3qup_A          147 ACGMEYLSSRNFIHRDLAARNCMLAED---MTVCVADFGLSRKIYSGDYYRQG-CASKLPVKWLALESLADNLYTVHSDV  222 (323)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC------------------CCGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHcCCcccCCCCcceEEEcCC---CCEEEeecccccccccccccccc-ccccCcccccCchhhcCCCCCCccch
Confidence            999999999999999999999999766   89999999998765443221111 33456788999999999899999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         157 EALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       157 ~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      ||||+++|+|++ |..||...........   +...    ........+++.+.+++.+||+.||++||++.++++.|++
T Consensus       223 ~slG~il~ell~~g~~p~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~  295 (323)
T 3qup_A          223 WAFGVTMWEIMTRGQTPYAGIENAEIYNY---LIGG----NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN  295 (323)
T ss_dssp             HHHHHHHHHHHTTSCCTTTTCCGGGHHHH---HHTT----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCCCCccccChHHHHHH---HhcC----CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            999999999999 9999998655443222   2111    1222336789999999999999999999999999999999


Q ss_pred             HHHhcc
Q psy2769         236 LLENKE  241 (257)
Q Consensus       236 ~~~~~~  241 (257)
                      ++....
T Consensus       296 ~l~~~~  301 (323)
T 3qup_A          296 ILGHLS  301 (323)
T ss_dssp             HHHC--
T ss_pred             HHHHhh
Confidence            998665

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=4.4e-41  Score=275.29  Aligned_cols=220  Identities=17%  Similarity=0.251  Sum_probs=180.4

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLM   71 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~   71 (257)
                      ...+.+.+|+.++.++.+||||+++++++...+..++|||++ +++|.+++....               ..+++..+..
T Consensus        67 ~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (327)
T 1fvr_A           67 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  146 (327)
T ss_dssp             ---CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHH
Confidence            455678999999999966999999999999999999999999 899999998532               3699999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCC
Q psy2769          72 LADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS  151 (257)
Q Consensus        72 ~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  151 (257)
                      ++.|++.||.+||+.|++|+||||+||+++.+   +.++|+|||++.......    ......+++.|+|||.+.+..++
T Consensus       147 i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~---~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~  219 (327)
T 1fvr_A          147 FAADVARGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVYT  219 (327)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECGG---GCEEECCTTCEESSCEEC----CC----CCTTTCCHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHHhCCccCCCCccceEEEcCC---CeEEEcccCcCccccccc----cccCCCCCccccChhhhccccCC
Confidence            99999999999999999999999999999876   899999999986432211    11334567889999999988889


Q ss_pred             CcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         152 PRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      .++||||||+++|+|++ |..||.....   ......+...    .....+..+|+.+.++|.+||+.||++||++++++
T Consensus       220 ~~~Di~slG~il~ellt~g~~pf~~~~~---~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell  292 (327)
T 1fvr_A          220 TNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEKLPQG----YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL  292 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTCCH---HHHHHHGGGT----CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             chhcchHHHHHHHHHHcCCCCCCCCCcH---HHHHHHhhcC----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            99999999999999998 9999987432   2222222211    11223357889999999999999999999999999


Q ss_pred             HHHHHHHHhcc
Q psy2769         231 DSFRNLLENKE  241 (257)
Q Consensus       231 ~~l~~~~~~~~  241 (257)
                      +.|.+++....
T Consensus       293 ~~L~~~~~~~~  303 (327)
T 1fvr_A          293 VSLNRMLEERK  303 (327)
T ss_dssp             HHHHHHHHSSS
T ss_pred             HHHHHHHHhhc
Confidence            99999999765

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.6e-40  Score=271.92  Aligned_cols=207  Identities=21%  Similarity=0.272  Sum_probs=166.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ....+.+|+.++..+. ||||+++++++...+..|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|
T Consensus        64 ~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~~  141 (327)
T 3a62_A           64 DTAHTKAERNILEEVK-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER-EGIFMEDTACFYLAEISMALGHLHQKG  141 (327)
T ss_dssp             -------HHHHHHHCC-CTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3456889999999998 999999999999999999999999 9999999985 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.+   +.++|+|||++........   ......|++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       142 ivH~Dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~  215 (327)
T 3a62_A          142 IIYRDLKPENIMLNHQ---GHVKLTDFGLCKESIHDGT---VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML  215 (327)
T ss_dssp             CCCCCCCTTTEEECTT---SCEEECCCSCC-------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHH
T ss_pred             EEcccCCHHHeEECCC---CcEEEEeCCcccccccCCc---cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHH
Confidence            9999999999999866   8999999999865432211   124557899999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      +|..||...   +....+..+.......     +..+++.+.++|.+||..||++||     +++++++
T Consensus       216 ~g~~pf~~~---~~~~~~~~i~~~~~~~-----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          216 TGAPPFTGE---NRKKTIDKILKCKLNL-----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HSSCSCCCS---SHHHHHHHHHHTCCCC-----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HCCCCCCCC---CHHHHHHHHHhCCCCC-----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            999999874   3334444444433322     257899999999999999999999     5555543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.5e-40  Score=270.78  Aligned_cols=221  Identities=19%  Similarity=0.219  Sum_probs=173.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.++.+||||+++++++...+..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|
T Consensus        53 ~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (316)
T 2ac3_A           53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHK-RRHFNELEASVVVQDVASALDFLHNKG  131 (316)
T ss_dssp             CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45678999999999877999999999999999999999999 8999999985 467999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC----CCCCccCCCCcccccChhHhcC-----CCCCCcchHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP----PRIRTRGLTGTARYASVNAHQW-----LDQSPRDDLEA  158 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~~aPE~~~~-----~~~~~~~Dv~s  158 (257)
                      ++|+||||+||+++.++....++|+|||++........    .........+++.|+|||++.+     ..++.++||||
T Consensus       132 ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws  211 (316)
T 2ac3_A          132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWS  211 (316)
T ss_dssp             CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHH
T ss_pred             ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHh
Confidence            99999999999998764444599999999875533211    0111134468999999999975     45788999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCcc------------HHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCCh
Q psy2769         159 LCYTLVYFLRGKLPWQSIKSDN------------EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY  226 (257)
Q Consensus       159 lg~~l~~l~~g~~p~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~  226 (257)
                      ||+++|+|++|..||......+            .......+.......+ ......+|+.+.++|.+||+.||++||++
T Consensus       212 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~  290 (316)
T 2ac3_A          212 LGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP-DKDWAHISCAAKDLISKLLVRDAKQRLSA  290 (316)
T ss_dssp             HHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCC-HHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             HHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccC-chhcccCCHHHHHHHHHHhhCChhhCCCH
Confidence            9999999999999998754322            1222333333333222 23335789999999999999999999999


Q ss_pred             HHHHH
Q psy2769         227 GKLRD  231 (257)
Q Consensus       227 ~~~~~  231 (257)
                      +++++
T Consensus       291 ~e~l~  295 (316)
T 2ac3_A          291 AQVLQ  295 (316)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99876

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=2.6e-40  Score=264.57  Aligned_cols=219  Identities=23%  Similarity=0.288  Sum_probs=181.5

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++++. ||||+++++++.+....++||||+ +++|.+++.. ...+++..+..++.|++.||.+||+.
T Consensus        48 ~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~  125 (277)
T 3f3z_A           48 EDVDRFKQEIEIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCHKL  125 (277)
T ss_dssp             SCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567899999999997 999999999999999999999999 8999999885 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||++..++..+.++|+|||.+.......    ......+++.|+|||.+.+. ++.++||||||+++|+|
T Consensus       126 ~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l  200 (277)
T 3f3z_A          126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVL  200 (277)
T ss_dssp             TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS----CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHH
T ss_pred             CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc----chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHH
Confidence            99999999999999554455899999999987764432    12455789999999998765 88999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLL  237 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~  237 (257)
                      ++|..||....   .......+....... +......+|+.+.++|.+||+.||++||++.++++  .+++..
T Consensus       201 ~~g~~p~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          201 LCGYPPFSAPT---DSEVMLKIREGTFTF-PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             HHSSCSSCCSS---HHHHHHHHHHCCCCC-CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             HHCCCCCCCCC---HHHHHHHHHhCCCCC-CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence            99999998743   333344444433332 23333578999999999999999999999999975  444443

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.6e-40  Score=266.62  Aligned_cols=213  Identities=16%  Similarity=0.167  Sum_probs=174.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.++++++ ||||+++++++.++...++||||+++++.+.+......+++..+..++.|++.||.|||+.|++
T Consensus        45 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~iv  123 (292)
T 3o0g_A           45 PSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL  123 (292)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             chHHHHHHHHHhcCC-CCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            467889999999998 9999999999999999999999998888888886677899999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||||+||+++.+   +.++|+|||++........   ......+++.|+|||.+.+.. ++.++||||+|+++|+|++
T Consensus       124 H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  197 (292)
T 3o0g_A          124 HRDLKPQNLLINRN---GELKLANFGLARAFGIPVR---CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN  197 (292)
T ss_dssp             CCCCSGGGEEECTT---SCEEECCCTTCEECCSCCS---CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTT
T ss_pred             cCCCCHHHEEEcCC---CCEEEeecccceecCCccc---cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHH
Confidence            99999999999876   8999999999987643321   114557899999999998766 7999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCCh------------------------hhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTP------------------------EAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      |..||...  .+....+..+.........                        ....+.+++.+.++|.+||+.||++||
T Consensus       198 ~~~p~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  275 (292)
T 3o0g_A          198 AGRPLFPG--NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI  275 (292)
T ss_dssp             TSCCSCCC--SSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred             cCCCCcCC--CCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCC
Confidence            88876543  2333333444332221110                        112235788999999999999999999


Q ss_pred             ChHHHHH
Q psy2769         225 NYGKLRD  231 (257)
Q Consensus       225 ~~~~~~~  231 (257)
                      |++++++
T Consensus       276 t~~e~l~  282 (292)
T 3o0g_A          276 SAEEALQ  282 (292)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9999875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2.6e-40  Score=265.44  Aligned_cols=212  Identities=20%  Similarity=0.254  Sum_probs=179.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.+++ ||||+++++++......+++||++ +++|.+.+.. ...+++..+..++.|++.||.+||+.|+
T Consensus        49 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i  126 (284)
T 3kk8_A           49 FQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESIAYCHSNGI  126 (284)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHcC-CCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            456889999999998 999999999999999999999999 8999998885 4679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+...+.++|+|||.+.......    ......+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       127 ~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~  202 (284)
T 3kk8_A          127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV  202 (284)
T ss_dssp             ECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHH
Confidence            999999999999876555679999999997654432    1134578999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||...   +.......+........ ......+++.+.+++.+||+.||++||+++++++
T Consensus       203 g~~pf~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          203 GYPPFWDE---DQHRLYAQIKAGAYDYP-SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             SSCSSCCS---SHHHHHHHHHHTCCCCC-TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCCCCCC---chhHHHHHHHhccccCC-chhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            99999874   33333444444333322 2233578999999999999999999999999977

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.2e-40  Score=274.67  Aligned_cols=205  Identities=20%  Similarity=0.236  Sum_probs=173.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.+++++. ||||+++++++......++||||+.|+|.+++......+++..+..++.|++.||.|||+.|++
T Consensus        98 ~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv  176 (348)
T 1u5q_A           98 WQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI  176 (348)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEEECCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            356889999999998 9999999999999999999999998899999876677899999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |+||||+||+++.+   +.++|+|||++......       ....+++.|+|||++.   +..++.++||||||+++|+|
T Consensus       177 H~Dlkp~NIll~~~---~~~kL~DfG~a~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~el  246 (348)
T 1u5q_A          177 HRDVKAGNILLSEP---GLVKLGDFGSASIMAPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL  246 (348)
T ss_dssp             CCCCSGGGEEEETT---TEEEECCCTTCBSSSSB-------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHEEECCC---CCEEEeeccCceecCCC-------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999876   89999999998765332       4457899999999985   45678999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   ....+..+.....+   ......+|+.+.++|.+||+.||++||+++++++
T Consensus       247 l~g~~p~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          247 AERKPPLFNMN---AMSALYHIAQNESP---ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HHSSCTTTTSC---HHHHHHHHHHSCCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HhCCCCCCCCC---hHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            99999998743   22223333332211   1122568999999999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=3.9e-41  Score=276.42  Aligned_cols=221  Identities=17%  Similarity=0.206  Sum_probs=183.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLMLA   73 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~~   73 (257)
                      .+.+.+|+.+++++.+||||+++++++...+..++||||+ +++|.+++....               ..++...+..++
T Consensus        84 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  163 (334)
T 2pvf_A           84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT  163 (334)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHH
Confidence            4568899999999966999999999999999999999999 899999998532               248999999999


Q ss_pred             HHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          74 DQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        74 ~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      .|++.||.+||+.|++|+||||+||+++.+   +.++|+|||++......... .......+++.|+|||.+.+..++.+
T Consensus       164 ~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~  239 (334)
T 2pvf_A          164 YQLARGMEYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQ  239 (334)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECTTTSSE-ECCSCCCCCGGGCCHHHHHHCEECHH
T ss_pred             HHHHHHHHHHHhCCeeCCCCccceEEEcCC---CCEEEccccccccccccccc-cccCCCCcccceeChHHhcCCCcChH
Confidence            999999999999999999999999999766   88999999999876543211 11133456788999999988888999


Q ss_pred             chHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      +||||||+++|+|++ |..||....   ..+....+....    .......+++.+.+++..||+.||++||++.++++.
T Consensus       240 ~Di~slG~il~ellt~g~~p~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          240 SDVWSFGVLMWEIFTLGGSPYPGIP---VEELFKLLKEGH----RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCC---HHHHHHHHHHTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCcCcCC---HHHHHHHHhcCC----CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999 999998743   223223332221    122336789999999999999999999999999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |++++....
T Consensus       313 L~~l~~~~~  321 (334)
T 2pvf_A          313 LDRILTLTT  321 (334)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHhccc
Confidence            999998654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=4e-41  Score=274.55  Aligned_cols=226  Identities=19%  Similarity=0.168  Sum_probs=182.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.+++++. ||||+++++++...  ...++||||+ +++|.+++.  ...+++..+..++.|++.||.+||+.
T Consensus        77 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~i~~~l~~~l~~LH~~  153 (318)
T 3lxp_A           77 RSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP--RHSIGLAQLLLFAQQICEGMAYLHAQ  153 (318)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCC-CcchhhEEEEEecCCCceEEEEEecccCCcHHHHHh--hCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            456899999999998 99999999999874  5789999999 899999998  45699999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++||||||+++|+|
T Consensus       154 ~ivH~Dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  230 (318)
T 3lxp_A          154 HYIHRDLAARNVLLDND---RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL  230 (318)
T ss_dssp             TEECSCCSGGGEEECTT---CCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             CccCCCCchheEEEcCC---CCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHH
Confidence            99999999999999766   889999999998765543222222445678889999999988889999999999999999


Q ss_pred             HhCCCCCCCCCCc--------cHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         167 LRGKLPWQSIKSD--------NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       167 ~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      ++|..||......        ........+...............+|+.+.++|++||+.||++||+++++++.|+++.+
T Consensus       231 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          231 LTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             HTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            9999999763211        01111111222222222333346789999999999999999999999999999999987


Q ss_pred             hcc
Q psy2769         239 NKE  241 (257)
Q Consensus       239 ~~~  241 (257)
                      ...
T Consensus       311 ~~~  313 (318)
T 3lxp_A          311 KYQ  313 (318)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.1e-41  Score=291.38  Aligned_cols=219  Identities=20%  Similarity=0.331  Sum_probs=184.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.++++++ ||||+++++++......++||||+ +++|.+++... ...++...+..++.|++.||.|||++
T Consensus       259 ~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~  337 (495)
T 1opk_A          259 EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK  337 (495)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHhcC-CCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4678999999999998 999999999999999999999999 89999999864 45699999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++||||||+||+++.+   +.+||+|||++........  .......++..|+|||.+.+..++.++||||||+++|+|
T Consensus       338 ~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el  412 (495)
T 1opk_A          338 NFIHRNLAARNCLVGEN---HLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI  412 (495)
T ss_dssp             TEECSCCSGGGEEECGG---GCEEECCTTCEECCTTCCE--ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred             CcccCCCChhhEEECCC---CcEEEeecccceeccCCce--eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHH
Confidence            99999999999999876   8999999999976543221  111334467789999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ++ |..||...........   +.. .   .....+..+|+.+.++|.+||+.||++||++.++++.|++++...
T Consensus       413 ~t~g~~p~~~~~~~~~~~~---~~~-~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~  480 (495)
T 1opk_A          413 ATYGMSPYPGIDLSQVYEL---LEK-D---YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  480 (495)
T ss_dssp             HTTSCCSSTTCCGGGHHHH---HHT-T---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred             HhCCCCCCCCCCHHHHHHH---HHc-C---CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence            99 9999998655443322   211 1   112233678999999999999999999999999999999887543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=6.4e-41  Score=278.79  Aligned_cols=213  Identities=19%  Similarity=0.212  Sum_probs=180.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.++. ||||+++++++...+..++||||+ +++|.+.+......+++..+..++.|++.||.|||+.|
T Consensus       129 ~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  207 (373)
T 2x4f_A          129 DKEEVKNEISVMNQLD-HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY  207 (373)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3567899999999997 999999999999999999999999 89999999865667999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||++..+ ..+.++|+|||++........    .....|++.|+|||++.+..++.++||||||+++|+|+
T Consensus       208 ivH~Dlkp~NIll~~~-~~~~~kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  282 (373)
T 2x4f_A          208 ILHLDLKPENILCVNR-DAKQIKIIDFGLARRYKPREK----LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL  282 (373)
T ss_dssp             EECCCCCGGGEEEEET-TTTEEEECCCSSCEECCTTCB----CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHH
T ss_pred             cccccCCHHHEEEecC-CCCcEEEEeCCCceecCCccc----cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHH
Confidence            9999999999999643 237899999999987644321    13456999999999999888999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||...   +....+..+........ ......+++.+.++|.+||..||.+||+++++++
T Consensus       283 tg~~pf~~~---~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          283 SGLSPFLGD---NDAETLNNILACRWDLE-DEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HSSCTTCCS---SHHHHHHHHHHTCCCSC-SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCC---CHHHHHHHHHhccCCCC-hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999999874   33444444444433332 2334678999999999999999999999999987

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=6.5e-41  Score=276.28  Aligned_cols=221  Identities=32%  Similarity=0.516  Sum_probs=174.5

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      +.+|+..+..+. ||||+++++++..    ....++|||+++++|.+++... ..+++..+..++.|++.||.|||+.|+
T Consensus        95 ~~~e~~~~~~l~-h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i  172 (345)
T 2v62_A           95 CIKKWIERKQLD-YLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQN-GTFKKSTVLQLGIRMLDVLEYIHENEY  172 (345)
T ss_dssp             HHHHHHHHHTCS-CCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGG-GBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHhhcccc-ccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            556666666676 9999999999887    6789999999999999998853 379999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC----CCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP----RIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +|+||||+||+++.+. .+.++|+|||++.........    ........+++.|+|||.+.+..++.++||||||+++|
T Consensus       173 vH~Dlkp~NIll~~~~-~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  251 (345)
T 2v62_A          173 VHGDIKAANLLLGYKN-PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCML  251 (345)
T ss_dssp             ECSCCSGGGEEEESSS-TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             eCCCcCHHHEEEccCC-CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHH
Confidence            9999999999998762 238999999999776433211    11114457999999999999998999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhh---hc--CCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAI---CE--GTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      +|++|..||..........  ...........+...   ..  .+|+.+.+++..||..||++||+++++++.|++...
T Consensus       252 ell~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          252 RWLCGKLPWEQNLKDPVAV--QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHSSCTTGGGTTCHHHH--HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHhCCCCccccccccHHH--HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            9999999997533222211  111111111111111   11  789999999999999999999999999999987654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=4.7e-41  Score=269.04  Aligned_cols=223  Identities=18%  Similarity=0.260  Sum_probs=176.5

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYCS-KRFSLKTVLMLADQMI   77 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~   77 (257)
                      ||+.......+.+.+|+.++.+++ ||||+++++++.. .+..++|||++ +++|.+++.... ..+++..+..++.|++
T Consensus        49 vK~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~  127 (278)
T 1byg_A           49 VKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC  127 (278)
T ss_dssp             EEECCCCC--HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred             EEEecchhHHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHH
Confidence            355555556778999999999998 9999999998654 45789999999 889999998643 2489999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||.+||+.|++|+||+|+||+++.+   +.++|+|||++.......      ....+++.|+|||.+.+..++.++|||
T Consensus       128 ~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~  198 (278)
T 1byg_A          128 EAMEYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVW  198 (278)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC------------------CCTTTSCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHhCCccccCCCcceEEEeCC---CcEEEeeccccccccccc------cCCCccccccCHHHhCCCCCCchhcHH
Confidence            99999999999999999999999866   899999999987543321      233567899999999988899999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       158 slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |||+++|+|++ |..||...........   +..    .........+|+.+.+++.+||+.||++||++.++++.|+++
T Consensus       199 slG~il~~l~t~g~~p~~~~~~~~~~~~---~~~----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i  271 (278)
T 1byg_A          199 SFGILLWEIYSFGRVPYPRIPLKDVVPR---VEK----GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  271 (278)
T ss_dssp             HHHHHHHHHHTTSCCSCTTSCGGGHHHH---HTT----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHH---Hhc----CCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence            99999999998 9999987654433221   111    112233367899999999999999999999999999999998


Q ss_pred             HHhc
Q psy2769         237 LENK  240 (257)
Q Consensus       237 ~~~~  240 (257)
                      ....
T Consensus       272 ~~~~  275 (278)
T 1byg_A          272 KTHE  275 (278)
T ss_dssp             HHHC
T ss_pred             Hhhh
Confidence            7654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=4.6e-41  Score=275.17  Aligned_cols=234  Identities=15%  Similarity=0.206  Sum_probs=187.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS------KRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~------~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..++.+|+.++.++. ||||+++++++......++||||+ +++|.+++....      ..++...+..++.|++.||.+
T Consensus        77 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~  155 (327)
T 2yfx_A           77 ELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY  155 (327)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCC-CCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHH
Confidence            457889999999997 999999999999998999999999 999999998643      358999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ||+.|++|+||+|+||+++.++....++|+|||++.......... ......+++.|+|||.+.+..++.++||||||++
T Consensus       156 LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  234 (327)
T 2yfx_A          156 LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR-KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL  234 (327)
T ss_dssp             HHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccc-cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHH
Confidence            999999999999999999866455679999999986543322111 1134567889999999998889999999999999


Q ss_pred             HHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         163 LVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       163 l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      +|+|++ |..||....   .......+...    ........+|+.+.++|.+||+.||.+||++.++++.+..+.....
T Consensus       235 l~ellt~g~~p~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~  307 (327)
T 2yfx_A          235 LWEIFSLGYMPYPSKS---NQEVLEFVTSG----GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  307 (327)
T ss_dssp             HHHHHTTSCCSSTTCC---HHHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             HHHHHcCCCCCCCCcC---HHHHHHHHhcC----CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence            999998 999998743   22222222222    1122236789999999999999999999999999999999988766


Q ss_pred             ccCCCCCcccc
Q psy2769         242 RCEFDLRYDWT  252 (257)
Q Consensus       242 ~~~~~~~~~~~  252 (257)
                      ........+|.
T Consensus       308 ~~~~~~~~~~~  318 (327)
T 2yfx_A          308 VINTALPIEYG  318 (327)
T ss_dssp             HHTCCCCCC--
T ss_pred             HhccccccccC
Confidence            44444444443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.4e-40  Score=278.40  Aligned_cols=215  Identities=17%  Similarity=0.180  Sum_probs=170.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCC--ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD--YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~--~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+++.+|+.++..+.+||||+++++++...+  ..|+||||++++|.+++..  ..+++..+..++.|++.||.|||+.
T Consensus        51 ~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~  128 (388)
T 3oz6_A           51 DAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLHSG  128 (388)
T ss_dssp             HHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCSEEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccCcCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34567899999999988999999999997543  6899999998899999983  5799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC------------------CCCCccCCCCcccccChhHhcC-
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP------------------PRIRTRGLTGTARYASVNAHQW-  147 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~------------------~~~~~~~~~~~~~~~aPE~~~~-  147 (257)
                      ||+||||||+||+++.+   +.+||+|||++........                  .........+|+.|+|||++.+ 
T Consensus       129 ~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  205 (388)
T 3oz6_A          129 GLLHRDMKPSNILLNAE---CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGS  205 (388)
T ss_dssp             TEECCCCCGGGEEECTT---CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTC
T ss_pred             CEEeCCCCHHHeEEcCC---CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCC
Confidence            99999999999999876   8999999999976543211                  1111234679999999999987 


Q ss_pred             CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhh----------------------------
Q psy2769         148 LDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA----------------------------  199 (257)
Q Consensus       148 ~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------  199 (257)
                      ..++.++||||+||++|+|++|.+||.+...   ...+..+...........                            
T Consensus       206 ~~~~~~~DiwSlG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (388)
T 3oz6_A          206 TKYTKGIDMWSLGCILGEILCGKPIFPGSST---MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKR  282 (388)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CC
T ss_pred             CCCCChhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHH
Confidence            5689999999999999999999999987533   233333322111000000                            


Q ss_pred             --------------hhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         200 --------------ICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       200 --------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                                    ....+++.+.+++.+||..||++|||++++++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~  328 (388)
T 3oz6_A          283 DIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALK  328 (388)
T ss_dssp             CCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhC
Confidence                          01267899999999999999999999999876

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-41  Score=281.38  Aligned_cols=212  Identities=22%  Similarity=0.261  Sum_probs=178.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++.+....++||||+ +++|.+++......+++..+..++.|++.||.|||+.|+
T Consensus        92 ~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  170 (387)
T 1kob_A           92 KYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI  170 (387)
T ss_dssp             HHHHHHHHHHHTTCC-STTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            346889999999998 999999999999999999999999 999999988555679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||||+||+++.+ ..+.++|+|||++.......    ......+|+.|+|||++.+..++.++||||||+++|+|++
T Consensus       171 vHrDlkp~NIll~~~-~~~~vkL~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  245 (387)
T 1kob_A          171 VHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDE----IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS  245 (387)
T ss_dssp             ECCCCCGGGEEESST-TCCCEEECCCTTCEECCTTS----CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred             eecccchHHeEEecC-CCCceEEEecccceecCCCc----ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHh
Confidence            999999999999753 23679999999998764432    1134468999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||...   +....+..+....... .......+|+.+.++|.+||+.||++||+++++++
T Consensus       246 g~~Pf~~~---~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          246 GLSPFAGE---DDLETLQNVKRCDWEF-DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             SCCSSCCS---SHHHHHHHHHHCCCCC-CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCC---CHHHHHHHHHhCCCCC-CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            99999874   3334444444333222 22333578999999999999999999999999876

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=3.9e-41  Score=282.58  Aligned_cols=216  Identities=16%  Similarity=0.156  Sum_probs=170.3

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..+.+|+.++.++.+||||+++++++..    ....|+||||+ +++|.+++... ...+++..+..++.|++.||.|||
T Consensus        99 ~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH  178 (400)
T 1nxk_A           99 PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH  178 (400)
T ss_dssp             HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4678999999888779999999998875    56789999999 89999999853 346999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.||+||||||+||+++.+..++.+||+|||++.......    ......+|+.|+|||++.+..++.++||||||+++|
T Consensus       179 ~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  254 (400)
T 1nxk_A          179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY  254 (400)
T ss_dssp             HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------------CTTCCGGGSCCCCSSSHHHHHHHHHHHH
T ss_pred             HCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC----ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHH
Confidence            9999999999999999874445899999999998654321    114557899999999999989999999999999999


Q ss_pred             HHHhCCCCCCCCCCccH-HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNE-ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|++|..||........ ......+......... .....+++.+.++|++||..||++|||++++++
T Consensus       255 ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          255 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN-PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             HHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCT-TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCCCccccccHHHHHHHHcCcccCCC-cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            99999999987543221 1112223333332222 223578999999999999999999999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=8.3e-41  Score=272.20  Aligned_cols=222  Identities=20%  Similarity=0.257  Sum_probs=182.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-ccEEEEecc-CCCHHHHHHHhcC---------------CCCHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-YNILVMELL-GPSLEDLFQYCSK---------------RFSLKTVLML   72 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-~~~~v~e~~-~~~L~~~~~~~~~---------------~~~~~~~~~~   72 (257)
                      .+.+.+|+.++.++.+||||+++++++...+ ..++||||+ +++|.+++.....               .+++..+..+
T Consensus        74 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (316)
T 2xir_A           74 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY  153 (316)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHH
Confidence            3468899999999977999999999987654 589999999 8999999985422               1889999999


Q ss_pred             HHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCC
Q psy2769          73 ADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP  152 (257)
Q Consensus        73 ~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  152 (257)
                      +.|++.||.+||+.|++|+||||+||+++.+   +.++|+|||++......... .......+++.|+|||.+.+..++.
T Consensus       154 ~~qi~~al~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~  229 (316)
T 2xir_A          154 SFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDY-VRKGDARLPLKWMAPETIFDRVYTI  229 (316)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCGGGSCTTTCTTS-EEETTEEECGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHhCCcccccCccceEEECCC---CCEEECCCccccccccCccc-eeccCCCcceeecCchhhccccccc
Confidence            9999999999999999999999999999876   88999999999765443211 1123456788999999999989999


Q ss_pred             cchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         153 RDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       153 ~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++||||||+++|+|++ |..||........  ....+...    ........+++.+.+++.+||+.||.+||++.++++
T Consensus       230 ~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  303 (316)
T 2xir_A          230 QSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKEG----TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE  303 (316)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCCSHH--HHHHHHHT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCcccchhHH--HHHHhccC----ccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999998 9999987654332  11222221    112223568999999999999999999999999999


Q ss_pred             HHHHHHHhcc
Q psy2769         232 SFRNLLENKE  241 (257)
Q Consensus       232 ~l~~~~~~~~  241 (257)
                      .|++++....
T Consensus       304 ~L~~~~~~~~  313 (316)
T 2xir_A          304 HLGNLLQANA  313 (316)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHhhhc
Confidence            9999998654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2.9e-40  Score=284.02  Aligned_cols=213  Identities=23%  Similarity=0.297  Sum_probs=180.1

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++++. ||||+++++++.+....++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.
T Consensus        63 ~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~  140 (486)
T 3mwu_A           63 KDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKH  140 (486)
T ss_dssp             SCHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhCC-CCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567899999999997 999999999999999999999999 9999998875 46799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.....+.++|+|||++.......    ......|++.|+|||++.+ .++.++||||+|+++|+|
T Consensus       141 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l  215 (486)
T 3mwu_A          141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYIL  215 (486)
T ss_dssp             TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHH
T ss_pred             CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC----ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHH
Confidence            99999999999999765555789999999987654332    1245679999999999987 588999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.+.   +....+..+.........+ .+..+|+.+.++|.+||..||++|||+.++++
T Consensus       216 l~g~~pf~~~---~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          216 LSGTPPFYGK---NEYDILKRVETGKYAFDLP-QWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHTCCCSCSG-GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HhCCCCCCCC---CHHHHHHHHHhCCCCCCCc-ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            9999999874   4444555555554444333 23578999999999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=6.9e-41  Score=269.64  Aligned_cols=221  Identities=19%  Similarity=0.227  Sum_probs=179.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++++. ||||+++++++.... .++|+|++ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        64 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  141 (291)
T 1u46_A           64 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR  141 (291)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3567889999999997 999999999998765 89999999 89999999876677999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++||||||+++|+|+
T Consensus       142 i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  218 (291)
T 1u46_A          142 FIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF  218 (291)
T ss_dssp             EECSCCCGGGEEEEET---TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred             cccCCCchheEEEcCC---CCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999876   8999999999887654432222223455777899999999888899999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      + |..||....   .......+....   ........+|+.+.+++.+||+.||++||++.++++.|+++....
T Consensus       219 ~~g~~p~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          219 TYGQEPWIGLN---GSQILHKIDKEG---ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             TTSCCTTTTCC---HHHHHHHHHTSC---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             hCCCCCcccCC---HHHHHHHHHccC---CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence            9 999998753   233333332221   122233678999999999999999999999999999999876643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=8.8e-41  Score=266.42  Aligned_cols=212  Identities=20%  Similarity=0.298  Sum_probs=170.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC-
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK-   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-   87 (257)
                      .+.+.+|+.+++.++ ||||+++++++...+..++||||+ +++|.+++.  ...+++..+..++.|++.||.+||+.| 
T Consensus        50 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~~  126 (271)
T 3dtc_A           50 IENVRQEAKLFAMLK-HPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--GKRIPPDILVNWAVQIARGMNYLHDEAI  126 (271)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHHHHHhcC-CCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            467889999999998 999999999999999999999999 999999886  568999999999999999999999999 


Q ss_pred             --ccccCCCCCceEeeccC-----CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          88 --IVHRDIKPDNFLMGVRE-----NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        88 --i~H~dl~~~nili~~~~-----~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                        ++|+||||+||+++.+.     ..+.++|+|||.+........     ....+++.|+|||.+.+..++.++||||||
T Consensus       127 ~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  201 (271)
T 3dtc_A          127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK-----MSAAGAYAWMAPEVIRASMFSKGSDVWSYG  201 (271)
T ss_dssp             SCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------------CCGGGSCHHHHHHCCCSHHHHHHHHH
T ss_pred             CceeecCCchHHEEEecccccccccCcceEEccCCcccccccccc-----cCCCCccceeCHHHhccCCCCchhhHHHHH
Confidence              88999999999997532     147899999999876543221     345689999999999998899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      +++++|++|..||.....   ......+...   .........+|+.+.+++.+||+.||++||++.++++.|++
T Consensus       202 ~~l~~l~~g~~p~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~  270 (271)
T 3dtc_A          202 VLLWELLTGEVPFRGIDG---LAVAYGVAMN---KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHHHHCCCTTTTSCH---HHHHHHHHTS---CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCCCCCH---HHHHHhhhcC---CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence            999999999999987432   2222222211   12223346789999999999999999999999999999875

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=2.4e-41  Score=276.83  Aligned_cols=228  Identities=18%  Similarity=0.176  Sum_probs=181.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeee--eCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGT--SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~--~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.++.++. ||||+++++++.  .....++||||+ +++|.+++......+++..+..++.|++.||.+||+.
T Consensus        68 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~  146 (327)
T 3lxl_A           68 QRDFQREIQILKALH-SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR  146 (327)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcC-CCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            456899999999997 999999999876  456789999999 9999999987666799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++||||||+++|+|
T Consensus       147 ~ivH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  223 (327)
T 3lxl_A          147 RCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL  223 (327)
T ss_dssp             TEECSCCSGGGEEEEET---TEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             CccCCCCChhhEEECCC---CCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHH
Confidence            99999999999999877   899999999998765443222222445688889999999988889999999999999999


Q ss_pred             HhCCCCCCCCCCccH--------HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         167 LRGKLPWQSIKSDNE--------ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      ++|..||........        ......+...............+|+.+.+++.+||+.||++||++.++++.|+.+..
T Consensus       224 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  303 (327)
T 3lxl_A          224 FTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS  303 (327)
T ss_dssp             HTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred             HhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            999999876321100        000111112122222223346789999999999999999999999999999999987


Q ss_pred             hcc
Q psy2769         239 NKE  241 (257)
Q Consensus       239 ~~~  241 (257)
                      ...
T Consensus       304 ~~~  306 (327)
T 3lxl_A          304 GSR  306 (327)
T ss_dssp             ---
T ss_pred             hhc
Confidence            665

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4e-41  Score=275.05  Aligned_cols=212  Identities=21%  Similarity=0.222  Sum_probs=173.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. ||||+++++++..+...++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|
T Consensus        48 ~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~g  125 (323)
T 3tki_A           48 CPENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (323)
T ss_dssp             ---CHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3467899999999998 999999999999999999999999 8999998873 456999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||||+||+++.+   +.++|+|||++.......... ......|++.|+|||++.+..+ +.++||||||+++|+|
T Consensus       126 ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  201 (323)
T 3tki_A          126 ITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRER-LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM  201 (323)
T ss_dssp             EECSCCSGGGEEECTT---CCEEECCCTTCEECEETTEEC-CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHH
T ss_pred             ccccccchHHEEEeCC---CCEEEEEeeccceeccCCccc-ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHH
Confidence            9999999999999866   889999999997654332111 1245679999999999988775 7789999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||..........  ......   .........+++.+.++|.+||..||++|||++++++
T Consensus       202 l~g~~pf~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          202 LAGELPWDQPSDSCQEY--SDWKEK---KTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHSSCSCSSSCTTSHHH--HHHHTT---CTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HhCCCCCCCCchHHHHH--HHHhcc---cccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            99999998765433221  111111   1111123568899999999999999999999998865

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.4e-41  Score=297.39  Aligned_cols=218  Identities=17%  Similarity=0.268  Sum_probs=178.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.+++ ||||+++++++..+ ..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||
T Consensus       414 ~~~~~~E~~il~~l~-hpnIv~l~~~~~~~-~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~yLH~~~i  490 (635)
T 4fl3_A          414 KDELLAEANVMQQLD-NPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESNF  490 (635)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEecC-CEEEEEEccCCCCHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            467999999999998 99999999999754 588999999 9999999984 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.+||+|||++.................++..|+|||++.+..++.++||||||+++|+|++
T Consensus       491 iHrDLkp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt  567 (635)
T 4fl3_A          491 VHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS  567 (635)
T ss_dssp             CCSCCSGGGEEEEET---TEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             eCCCCChHhEEEeCC---CCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHh
Confidence            999999999999877   89999999998766543322222233456788999999999899999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                       |..||.+....   +....+...    .....+..+|+.+.++|..||+.||++||+++++++.|++++.+.
T Consensus       568 ~G~~Pf~~~~~~---~~~~~i~~~----~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l  633 (635)
T 4fl3_A          568 YGQKPYRGMKGS---EVTAMLEKG----ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  633 (635)
T ss_dssp             TTCCSSTTCCHH---HHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHH---HHHHHHHcC----CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence             99999875432   222222222    222334679999999999999999999999999999999988653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=6.7e-41  Score=272.42  Aligned_cols=223  Identities=21%  Similarity=0.295  Sum_probs=171.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCcc----EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYN----ILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~----~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+.+.+|+.++.++. ||||+++++++......    |+||||+ +++|.+++.. ...+++..+..++.|++.||.|||
T Consensus        56 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH  133 (311)
T 3ork_A           56 YLRFRREAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSH  133 (311)
T ss_dssp             HHHHHHHHTTCCCCC-CTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCC-CCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            346889999999997 99999999998765543    9999999 8999999985 467999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.|++|+||||+||+++.+   +.++|+|||++.................|++.|+|||.+.+..++.++||||||+++|
T Consensus       134 ~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~  210 (311)
T 3ork_A          134 QNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY  210 (311)
T ss_dssp             HTTCCCCCCCGGGEEEETT---SCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             HCCCCcCCCCHHHEEEcCC---CCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHH
Confidence            9999999999999999876   8899999999976654433323334567899999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-hHHHHHHHHHHHHhcc
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-YGKLRDSFRNLLENKE  241 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-~~~~~~~l~~~~~~~~  241 (257)
                      +|++|..||.....   ......... ............+|+.+.++|.+||+.||++||+ ++++...+.+......
T Consensus       211 ~ll~g~~pf~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~  284 (311)
T 3ork_A          211 EVLTGEPPFTGDSP---VSVAYQHVR-EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP  284 (311)
T ss_dssp             HHHHSSCSCCCSSH---HHHHHHHHH-CCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCC
T ss_pred             HHHhCCCCCCCCCh---HHHHHHHhc-CCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCC
Confidence            99999999987432   222222111 2223344445679999999999999999999995 5556667776655443

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.9e-41  Score=276.04  Aligned_cols=212  Identities=18%  Similarity=0.186  Sum_probs=169.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      ...+.+|+.++++++ ||||+++++++......++||||++++|.+++......+++..+..++.|++.||.|||+.|++
T Consensus        44 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv  122 (324)
T 3mtl_A           44 PCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVL  122 (324)
T ss_dssp             CCCCCCCHHHHSCCC-CTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             chhHHHHHHHHHhcC-CCCCCeeeeEEeeCCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            346678999999998 9999999999999999999999998899999987677799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||||+||+++.+   +.++|+|||++........   ......+++.|+|||++.+ ..++.++||||+|+++|+|++
T Consensus       123 H~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~  196 (324)
T 3mtl_A          123 HRDLKPQNLLINER---GELKLADFGLARAKSIPTK---TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT  196 (324)
T ss_dssp             ESSCCGGGEEECTT---CCEEECSSSEEECC---------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCcCHHHEEECCC---CCEEEccCcccccccCCcc---ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence            99999999999876   8899999999875443221   1134568999999999987 467999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCC-------------------------hhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMT-------------------------PEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      |..||.+....   .....+........                         .......+++.+.++|.+||+.||++|
T Consensus       197 g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  273 (324)
T 3mtl_A          197 GRPLFPGSTVE---EQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNR  273 (324)
T ss_dssp             SSCSCCCSSHH---HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             CCCCCCCCCHH---HHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccC
Confidence            99999875433   33333322211110                         112234678899999999999999999


Q ss_pred             CChHHHHH
Q psy2769         224 PNYGKLRD  231 (257)
Q Consensus       224 p~~~~~~~  231 (257)
                      ||++++++
T Consensus       274 ~t~~e~l~  281 (324)
T 3mtl_A          274 ISAEDAMK  281 (324)
T ss_dssp             CCHHHHTT
T ss_pred             CCHHHHhc
Confidence            99999976

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.1e-40  Score=269.34  Aligned_cols=221  Identities=17%  Similarity=0.237  Sum_probs=179.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeee-eeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYG-TSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~-~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++++. ||||+++++++ ..++..+++|||+ +++|.+++......++...+..++.|++.||.+||+.|
T Consensus        70 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~  148 (298)
T 3f66_A           70 VSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK  148 (298)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            457889999999998 99999999985 4566889999999 88999999865677999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-CCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||||+||+++.+   +.++|+|||++......... ........+++.|+|||.+.+..++.++||||||+++|+|
T Consensus       149 i~H~dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  225 (298)
T 3f66_A          149 FVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL  225 (298)
T ss_dssp             CCCSCCSGGGEEECTT---CCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCchheEEECCC---CCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHH
Confidence            9999999999999766   89999999998765432211 1111344677889999999998999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      ++ |.+||...........   +....    ....+..+|+.+.+++.+||+.||++||++.++++.|++++.+..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          226 MTRGAPPYPDVNTFDITVY---LLQGR----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HTTSCCSSTTSCTTTHHHH---HHTTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HhCCCCCCccCCHHHHHHH---HhcCC----CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            99 6677776544443222   22211    122235689999999999999999999999999999999998654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.1e-40  Score=294.15  Aligned_cols=229  Identities=21%  Similarity=0.258  Sum_probs=187.6

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+..|..++..+.+||+|+++++++.+.+.+|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.
T Consensus       383 ~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~  461 (674)
T 3pfq_A          383 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGRFKEPHAVFYAAEIAIGLFFLQSK  461 (674)
T ss_dssp             TTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            345678889999999878999999999999999999999999 9999999985 46799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++.......   .......||+.|+|||++.+..++.++||||||+++|||
T Consensus       462 gIiHrDLKp~NILl~~~---g~ikL~DFGla~~~~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyel  535 (674)
T 3pfq_A          462 GIIYRDLKLDNVMLDSE---GHIKIADFGMCKENIWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM  535 (674)
T ss_dssp             SEECCCCCSTTEEECSS---SCEEECCCTTCEECCCTT---CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHH
T ss_pred             CeEeccCChhhEEEcCC---CcEEEeecceeeccccCC---cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHH
Confidence            99999999999999876   899999999987643322   122567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFD  246 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~  246 (257)
                      ++|..||.+.   +..+.+..+......     ++..+++.+.++|++||+.||++||++..  +..++++.    ..+-
T Consensus       536 ltG~~Pf~~~---~~~~~~~~i~~~~~~-----~p~~~s~~~~~li~~lL~~dP~~R~~~~~--~~~~ei~~----h~ff  601 (674)
T 3pfq_A          536 LAGQAPFEGE---DEDELFQSIMEHNVA-----YPKSMSKEAVAICKGLMTKHPGKRLGCGP--EGERDIKE----HAFF  601 (674)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHSSCCC-----CCTTSCHHHHHHHHHHSCSSSTTCTTCST--THHHHHHS----SGGG
T ss_pred             HcCCCCCCCC---CHHHHHHHHHhCCCC-----CCccCCHHHHHHHHHHccCCHHHCCCCCC--CcHHHHhc----Cccc
Confidence            9999999873   444445555443333     23678999999999999999999998721  11222222    2255


Q ss_pred             CCccccccccC
Q psy2769         247 LRYDWTLLERK  257 (257)
Q Consensus       247 ~~~~~~~~~~~  257 (257)
                      ..+||+.|++|
T Consensus       602 ~~i~w~~l~~~  612 (674)
T 3pfq_A          602 RYIDWEKLERK  612 (674)
T ss_dssp             SSCCHHHHTTT
T ss_pred             cCCCHHHHHhC
Confidence            56788887754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=3.8e-40  Score=264.79  Aligned_cols=212  Identities=22%  Similarity=0.313  Sum_probs=170.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..+.+.+|+.+++++. ||||+++++++.+....++||||+ +++|.+.+...   ...+++..+..++.|++.||.+||
T Consensus        63 ~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH  141 (285)
T 3is5_A           63 PMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH  141 (285)
T ss_dssp             CHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCC-CchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            4567899999999998 999999999999999999999999 89999998653   477999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.|++|+||||+||+++.+...+.++|+|||++.......    ......+++.|+|||.+.+ .++.++||||||+++|
T Consensus       142 ~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~  216 (285)
T 3is5_A          142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----HSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMY  216 (285)
T ss_dssp             HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHH
T ss_pred             hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----cCcCcccccCcCChHHhcc-CCCcccCeehHHHHHH
Confidence            9999999999999999765455889999999987654322    1144568999999999864 6789999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|++|..||.....   .............  .......+++.+.+++.+||+.||++||++.++++
T Consensus       217 ~ll~g~~pf~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          217 FLLTGCLPFTGTSL---EEVQQKATYKEPN--YAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHSSCSSCCSSH---HHHHHHHHHCCCC--CCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHhCCCCCCCCCH---HHHHhhhccCCcc--cccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999987432   2222222221111  11122457899999999999999999999999875

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=264.31  Aligned_cols=212  Identities=18%  Similarity=0.190  Sum_probs=173.0

Q ss_pred             ccccHHHHHHHHHhc--CCCCCcEEEeeeeeCC-----ccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLH--GAPGVPHVMGYGTSGD-----YNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~-----~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ...+.+|+.++++++  +||||+++++++....     ..+++||+++++|.+++.... ..+++..+..++.|++.||.
T Consensus        55 ~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~  134 (308)
T 3g33_A           55 PISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD  134 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence            346788999988886  4999999999998754     579999999889999998542 34999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY  161 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~  161 (257)
                      |||+.|++|+||||+||+++.+   +.++|+|||++.......    ......+|+.|+|||++.+..++.++||||||+
T Consensus       135 ~lH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  207 (308)
T 3g33_A          135 FLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQM----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC  207 (308)
T ss_dssp             HHHHTTCCCSCCCTTTEEECTT---SCEEECSCSCTTTSTTCC----CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHH
T ss_pred             HHHHCCcccCCCCHHHEEEcCC---CCEEEeeCccccccCCCc----ccCCccccccccCchHHcCCCCCchHHHHHHHH
Confidence            9999999999999999999766   899999999987553322    114457899999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhC----------------------ChhhhhcCCcHHHHHHHHHHhcCC
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTM----------------------TPEAICEGTPPEFAEFLRYCRGLA  219 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~li~~~l~~~  219 (257)
                      ++|+|++|..||....   ....+..+.......                      ......+.+++.+.++|.+||+.|
T Consensus       208 il~~l~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  284 (308)
T 3g33_A          208 IFAEMFRRKPLFCGNS---EADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFN  284 (308)
T ss_dssp             HHHHTTTSSCSCCCSS---HHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhCCCCCCCCC---HHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCC
Confidence            9999999999998743   333333333321111                      112233568899999999999999


Q ss_pred             CCCCCChHHHHH
Q psy2769         220 FSEEPNYGKLRD  231 (257)
Q Consensus       220 p~~Rp~~~~~~~  231 (257)
                      |++|||+.++++
T Consensus       285 P~~R~t~~e~l~  296 (308)
T 3g33_A          285 PHKRISAFRALQ  296 (308)
T ss_dssp             TTTSCCHHHHHT
T ss_pred             CccCCCHHHHhc
Confidence            999999999875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=4.7e-41  Score=286.35  Aligned_cols=219  Identities=19%  Similarity=0.262  Sum_probs=177.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.++++++ ||||+++++++.. +..++||||+ +++|.+++... ...++...+..++.|++.||.|||++
T Consensus       222 ~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~  299 (452)
T 1fmk_A          222 SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM  299 (452)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHhCC-CCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4567999999999998 9999999999876 6789999999 89999999753 45699999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++||||||+||+++.+   +.+||+|||++.........  ......++..|+|||.+.+..++.++||||||+++|+|
T Consensus       300 ~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el  374 (452)
T 1fmk_A          300 NYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL  374 (452)
T ss_dssp             TCCCSCCSGGGEEECGG---GCEEECCCCTTC----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CeeCCCCChhhEEECCC---CCEEECCCccceecCCCcee--cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHH
Confidence            99999999999999876   89999999998765432111  11334567889999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      ++ |..||.+...   .+....+...    .....+..+|+.+.++|.+||+.||++|||++++++.|++++....
T Consensus       375 ~t~g~~P~~~~~~---~~~~~~i~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~  443 (452)
T 1fmk_A          375 TTKGRVPYPGMVN---REVLDQVERG----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  443 (452)
T ss_dssp             HTTTCCSSTTCCH---HHHHHHHHTT----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             HhCCCCCCCCCCH---HHHHHHHHcC----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence            99 9999987543   2223333222    1122236789999999999999999999999999999999887554

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=3.9e-40  Score=283.77  Aligned_cols=219  Identities=20%  Similarity=0.286  Sum_probs=184.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. ||||+++++++.+....++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|
T Consensus        79 ~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~  156 (494)
T 3lij_A           79 SNSKLLEEVAVLKLLD-HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-RMKFNEVDAAVIIKQVLSGVTYLHKHN  156 (494)
T ss_dssp             TTHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4567899999999998 999999999999999999999999 9999998875 467999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.....+.++|+|||++.......    ......||+.|+|||++.+ .++.++||||+|+++|+|+
T Consensus       157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll  231 (494)
T 3lij_A          157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK----KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILL  231 (494)
T ss_dssp             EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHH
T ss_pred             ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----cccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHH
Confidence            9999999999999876555779999999987765432    1245679999999999874 6899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      +|..||.+.   ...+.+..+.........+ .+..+|+.+.++|++||..||++|||+.++++  .+++...
T Consensus       232 ~g~~pf~~~---~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~  300 (494)
T 3lij_A          232 AGYPPFGGQ---TDQEILRKVEKGKYTFDSP-EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS  300 (494)
T ss_dssp             HSSCSSCCS---SHHHHHHHHHHTCCCCCSG-GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHH
T ss_pred             hCCCCCCCC---CHHHHHHHHHhCCCCCCch-hcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcc
Confidence            999999874   3444455555554444333 33678999999999999999999999999975  4555443

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.6e-40  Score=274.11  Aligned_cols=214  Identities=17%  Similarity=0.202  Sum_probs=165.7

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++.+. ||||+++++++.+....++||||+ +++|.+++.. ...+++..+..++.|++.||.|||++
T Consensus        58 ~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~ql~~~L~~LH~~  135 (361)
T 3uc3_A           58 AIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERICN-AGRFSEDEARFFFQQLLSGVSYCHSM  135 (361)
T ss_dssp             TSCHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccHHHHHHHHHHHhCC-CCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567899999999998 999999999999999999999999 9999999975 55799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc-chHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR-DDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~-~Dv~slg~~l~~  165 (257)
                      |++||||||+||+++.+ ..+.++|+|||++.......    ......||+.|+|||++.+..++.+ +||||||+++|+
T Consensus       136 ~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  210 (361)
T 3uc3_A          136 QICHRDLKLENTLLDGS-PAPRLKICDFGYSKSSVLHS----QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYV  210 (361)
T ss_dssp             TCCSCCCCGGGEEECSS-SSCCEEECCCCCC-------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCHHHEEEcCC-CCceEEEeecCccccccccC----CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHH
Confidence            99999999999999764 22459999999986432221    1144579999999999988877655 899999999999


Q ss_pred             HHhCCCCCCCCCCcc-HHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDN-EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||....... ....+..+.......+.   ...+++.+.++|.+||..||++|||+.++++
T Consensus       211 ll~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          211 MLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD---DIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             HHHSSCSCC----CCCHHHHHHHHHTTCCCCCT---TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC---cCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            999999998755432 23333333222222211   1368899999999999999999999999976

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=4e-40  Score=268.05  Aligned_cols=218  Identities=20%  Similarity=0.261  Sum_probs=180.5

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      |+.......+.+.+|+.++..+. ||||+++++++......++||||+ +++|.+++......+++..+..++.|++.||
T Consensus        60 K~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l  138 (314)
T 3com_A           60 KQVPVESDLQEIIKEISIMQQCD-SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGL  138 (314)
T ss_dssp             EEEETTSCCHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             EecCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            44444555678999999999997 999999999999999999999999 8899999986677899999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .+||+.|++|+||+|+||+++.+   +.++|+|||.+........   ......+++.|+|||.+.+..++.++||||||
T Consensus       139 ~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  212 (314)
T 3com_A          139 EYLHFMRKIHRDIKAGNILLNTE---GHAKLADFGVAGQLTDTMA---KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLG  212 (314)
T ss_dssp             HHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECBTTBS---CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHH
T ss_pred             HHHHhCCCcCCCcCHHHEEECCC---CCEEEeecccchhhhhhcc---ccCccCCCCCccChhhcCCCCCCccccHHHHH
Confidence            99999999999999999999866   8899999999876544321   11445789999999999998899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +++|+|++|..||.....   ......+....  .........+|+.+.++|.+||+.||.+||+++++++
T Consensus       213 ~il~~l~~g~~p~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          213 ITAIEMAEGKPPYADIHP---MRAIFMIPTNP--PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHHHSSCTTTTSCH---HHHHHHHHHSC--CCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHhCCCCCCCCCh---HHHHHHHhcCC--CcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            999999999999987432   22222222211  1111123557899999999999999999999999976

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-40  Score=267.54  Aligned_cols=221  Identities=16%  Similarity=0.205  Sum_probs=180.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCcc-EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYN-ILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~-~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.++++++ ||||+++++++.+.+.. ++++|++ +++|.+++......+++..+..++.|++.||.+||+.|
T Consensus        66 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (298)
T 3pls_A           66 VEAFLREGLLMRGLN-HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK  144 (298)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            467889999999997 99999999999766544 9999999 99999999865678999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-CCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||||+||+++.+   +.++|+|||++........ .........+++.|+|||.+.+..++.++||||||+++|+|
T Consensus       145 i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  221 (298)
T 3pls_A          145 FVHRDLAARNCMLDES---FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWEL  221 (298)
T ss_dssp             CCCSCCSGGGEEECTT---CCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             cccCCCCcceEEEcCC---CcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHH
Confidence            9999999999999766   8999999999875433211 11122445678899999999999999999999999999999


Q ss_pred             HhC-CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         167 LRG-KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       167 ~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      ++| .+||..........   .+...    ........+|+.+.+++.+||+.||.+|||++++++.|++++....
T Consensus       222 ~~g~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~  290 (298)
T 3pls_A          222 LTRGAPPYRHIDPFDLTH---FLAQG----RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL  290 (298)
T ss_dssp             HHTSCCTTTTSCGGGHHH---HHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred             hhCCCCCCccCCHHHHHH---HhhcC----CCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence            995 44555433333221   12111    1222235689999999999999999999999999999999998765

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3e-41  Score=271.55  Aligned_cols=217  Identities=17%  Similarity=0.239  Sum_probs=174.2

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++.++. ||||+++++++..++..++||||+ +++|.+++......+++..+..++.|++.||.|||+.
T Consensus        54 ~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~  132 (289)
T 4fvq_A           54 NYSESFFEAASMMSKLS-HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN  132 (289)
T ss_dssp             GGHHHHHHHHHHHHTSC-CTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            34567899999999998 999999999999999999999999 8999999997655699999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCC-----CeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENF-----NTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALC  160 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~-----~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg  160 (257)
                      |++|+||||+||+++.+...     +.++|+|||.+......       ....+++.|+|||.+.+ ..++.++||||||
T Consensus       133 ~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  205 (289)
T 4fvq_A          133 TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-------DILQERIPWVPPECIENPKNLNLATDKWSFG  205 (289)
T ss_dssp             TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHH
T ss_pred             CeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-------cccCCcCcccCHHHhCCCCCCCchhHHHHHH
Confidence            99999999999999876211     12999999998543221       33457889999999987 6689999999999


Q ss_pred             HHHHHHHhC-CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHh
Q psy2769         161 YTLVYFLRG-KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN  239 (257)
Q Consensus       161 ~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~  239 (257)
                      +++|+|++| .+||....   ..... .....     ....+...++.+.+++.+||+.||++|||+.++++.|++++..
T Consensus       206 ~il~el~~g~~~~~~~~~---~~~~~-~~~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          206 TTLWEICSGGDKPLSALD---SQRKL-QFYED-----RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             HHHHHHHTTTCCTTTTSC---HHHHH-HHHHT-----TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             HHHHHHHcCCCCCccccc---hHHHH-HHhhc-----cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            999999995 55555432   11111 11111     1222256788899999999999999999999999999998875


Q ss_pred             cc
Q psy2769         240 KE  241 (257)
Q Consensus       240 ~~  241 (257)
                      .+
T Consensus       277 ~~  278 (289)
T 4fvq_A          277 DL  278 (289)
T ss_dssp             --
T ss_pred             CC
Confidence            54

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.6e-40  Score=267.07  Aligned_cols=212  Identities=17%  Similarity=0.249  Sum_probs=173.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK--   87 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--   87 (257)
                      +.+.+|+.+++++. ||||+++++++....  ++||||+ +++|.+.+......+++..+..++.|++.||.+||+.|  
T Consensus        68 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~  144 (287)
T 4f0f_A           68 QEFQREVFIMSNLN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP  144 (287)
T ss_dssp             HHHHHHHHHHTTCC-CTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred             HHHHHHHHHHHhCC-CCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            67889999999998 999999999987654  7999999 89999999866678999999999999999999999999  


Q ss_pred             ccccCCCCCceEeeccCC--CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc--CCCCCCcchHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVREN--FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ--WLDQSPRDDLEALCYTL  163 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--~~~~~~~~Dv~slg~~l  163 (257)
                      ++|+||||+||+++.++.  ...++|+|||++......      .....+++.|+|||.+.  ...++.++||||||+++
T Consensus       145 ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l  218 (287)
T 4f0f_A          145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL  218 (287)
T ss_dssp             CBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHH
T ss_pred             eecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHH
Confidence            999999999999976521  123999999998643321      24567899999999984  44568899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      |+|++|..||......... ....+.   .....+.....+|+.+.+++.+||+.||++||+++++++.|++
T Consensus       219 ~~l~~g~~pf~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~  286 (287)
T 4f0f_A          219 YTILTGEGPFDEYSYGKIK-FINMIR---EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE  286 (287)
T ss_dssp             HHHHHSSCTTTTCCCCHHH-HHHHHH---HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred             HHHHcCCCCCccccccHHH-HHHHHh---ccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence            9999999999876544321 112221   1222333446789999999999999999999999999999875

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.5e-41  Score=289.68  Aligned_cols=220  Identities=16%  Similarity=0.267  Sum_probs=181.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+.+|+.++++++ ||||+++++++. ....++||||+ +++|.+++... ...++...+..++.|++.||.|||+
T Consensus       225 ~~~~~~~~E~~~l~~l~-h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~  302 (454)
T 1qcf_A          225 MSVEAFLAEANVMKTLQ-HDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ  302 (454)
T ss_dssp             BCHHHHHHHHHHHTTCC-CTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHhhCC-CCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34678999999999998 999999999987 55799999999 99999999853 3468999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      +|++||||||+||+++.+   +.+||+|||++........  .......++..|+|||.+.+..++.++||||||+++||
T Consensus       303 ~~ivHrDlkp~Nill~~~---~~~kl~DFG~a~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~e  377 (454)
T 1qcf_A          303 RNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEY--TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME  377 (454)
T ss_dssp             TTCCCSSCSGGGEEECTT---CCEEECSTTGGGGBCCHHH--HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCHHHEEECCC---CcEEEeeCCCceEcCCCce--eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHH
Confidence            999999999999999866   8999999999976533211  11123346778999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |++ |..||.+...   .+....+... ..   ...+..+|+.+.++|.+||+.||++|||++++++.|+++.....
T Consensus       378 l~t~g~~P~~~~~~---~~~~~~i~~~-~~---~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~  447 (454)
T 1qcf_A          378 IVTYGRIPYPGMSN---PEVIRALERG-YR---MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE  447 (454)
T ss_dssp             HHTTSCCSSTTCCH---HHHHHHHHHT-CC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred             HHhCCCCCCCCCCH---HHHHHHHHcC-CC---CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence            999 9999987543   2333333322 11   12236789999999999999999999999999999999876543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=3.8e-41  Score=274.99  Aligned_cols=219  Identities=18%  Similarity=0.238  Sum_probs=180.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------KRFSLKTVLMLADQMISR   79 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~   79 (257)
                      ...+.+|+.+++.+. ||||+++++++......++|||++ +++|.+++....         ..++...+..++.|++.|
T Consensus        72 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  150 (322)
T 1p4o_A           72 RIEFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG  150 (322)
T ss_dssp             HHHHHHHHHHGGGCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHH
Confidence            346889999999998 999999999999999999999999 899999998542         457899999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEAL  159 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~sl  159 (257)
                      |.+||+.|++|+||||+||+++.+   +.++|+|||++.......... ......+++.|+|||.+.+..++.++|||||
T Consensus       151 l~~lH~~~i~H~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  226 (322)
T 1p4o_A          151 MAYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSF  226 (322)
T ss_dssp             HHHHHHTTCBCSCCSGGGEEECTT---CCEEECCTTCCCGGGGGGCEE-GGGSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHHHCCCccCCCccceEEEcCC---CeEEECcCccccccccccccc-cccCCCCCCCccChhhhccCCCCchhhHHHH
Confidence            999999999999999999999866   899999999987553322111 1134456788999999998889999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         160 CYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       160 g~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      |+++|+|++ |..||.....   ......+...    ........+|+.+.+++.+||+.||++||++.++++.|++.+.
T Consensus       227 G~il~el~~~g~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          227 GVVLWEIATLAEQPYQGLSN---EQVLRFVMEG----GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHHHHHHTSCCTTTTSCH---HHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHHHhcCCCccccCCH---HHHHHHHHcC----CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            999999999 8999987532   2222222222    1122336789999999999999999999999999999998766


Q ss_pred             hc
Q psy2769         239 NK  240 (257)
Q Consensus       239 ~~  240 (257)
                      ..
T Consensus       300 ~~  301 (322)
T 1p4o_A          300 PG  301 (322)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=5.7e-40  Score=268.04  Aligned_cols=212  Identities=17%  Similarity=0.239  Sum_probs=178.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++......++||||+ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        59 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i  136 (321)
T 2a2a_A           59 REEIEREVSILRQVL-HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQ-KESLSEEEATSFIKQILDGVNYLHTKKI  136 (321)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-CSCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            456899999999998 999999999999999999999999 9999999984 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCC-CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVREN-FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||+|+||+++.+.. ...++|+|||++........    .....+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       137 vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  212 (321)
T 2a2a_A          137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL  212 (321)
T ss_dssp             ECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCC----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             ecCCCChHHEEEecCCCCcCCEEEccCccceecCcccc----ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHH
Confidence            99999999999986521 12799999999987654321    14456899999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||...   .....+..+...... .++.....+|+.+.++|.+||..||++||+++++++
T Consensus       213 ~g~~pf~~~---~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          213 SGASPFLGD---TKQETLANITSVSYD-FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HSCCSSCCS---SHHHHHHHHHTTCCC-CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HCCCCCCCC---CHHHHHHHHHhcccc-cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            999999874   333333333332222 234455788999999999999999999999999976

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4.6e-41  Score=274.52  Aligned_cols=229  Identities=15%  Similarity=0.159  Sum_probs=182.0

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---KRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...+.+.+|+.++..+. ||||+++++++...+..++||||+ +++|.+++....   ..+++..+..++.|++.||.+|
T Consensus        77 ~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  155 (321)
T 2qkw_B           77 QGIEEFETEIETLSFCR-HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL  155 (321)
T ss_dssp             SHHHHHHHHHHGGGSCC-CTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh
Confidence            34567899999999998 999999999999999999999999 899999887432   3589999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.|++|+||||+||+++.+   +.++|+|||++.......... ......|++.|+|||.+.+..++.++||||||+++
T Consensus       156 H~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  231 (321)
T 2qkw_B          156 HTRAIIHRDVKSINILLDEN---FVPKITDFGISKKGTELDQTH-LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVL  231 (321)
T ss_dssp             HHTTEECSCCCSTTEEECTT---CCEEECCCTTCEECSSSSCCC-CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHH
T ss_pred             cCCCeecCCCCHHHEEECCC---CCEEEeecccccccccccccc-cccccCCCccccCHHHhcCCCCCcccchHhHHHHH
Confidence            99999999999999999766   899999999987654332211 11345689999999999888899999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhh---------CChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLT---------MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      |+|++|..||.....................         .........++..+.+++.+||+.||++||++.++++.|+
T Consensus       232 ~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~  311 (321)
T 2qkw_B          232 FEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE  311 (321)
T ss_dssp             HHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence            9999999999865443221111111110000         0011122345677999999999999999999999999999


Q ss_pred             HHHHhcc
Q psy2769         235 NLLENKE  241 (257)
Q Consensus       235 ~~~~~~~  241 (257)
                      ..++.+.
T Consensus       312 ~~l~~~~  318 (321)
T 2qkw_B          312 YALRLQE  318 (321)
T ss_dssp             HHHHSSC
T ss_pred             HHhhccc
Confidence            9988554

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=6.9e-40  Score=282.87  Aligned_cols=212  Identities=20%  Similarity=0.302  Sum_probs=180.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++++. ||||+++++++.+....++||||| +++|.+.+.. ...+++..+..++.|++.||.|||+.|
T Consensus        89 ~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~  166 (504)
T 3q5i_A           89 FHEEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-RHKFDECDAANIMKQILSGICYLHKHN  166 (504)
T ss_dssp             THHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3567889999999998 999999999999999999999999 9999999985 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.++....++|+|||++.......    ......|++.|+|||++.+ .++.++||||+|+++|+|+
T Consensus       167 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll  241 (504)
T 3q5i_A          167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY----KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILL  241 (504)
T ss_dssp             EECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHH
T ss_pred             eEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHH
Confidence            9999999999999876444579999999998764432    2245679999999999875 6889999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+.   +....+..+......... ..+..+|+.+.++|++||..||.+|||++++++
T Consensus       242 ~g~~pf~~~---~~~~~~~~i~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          242 CGYPPFGGQ---NDQDIIKKVEKGKYYFDF-NDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HSSCSSCCS---SHHHHHHHHHHCCCCCCH-HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hCCCCCCCC---CHHHHHHHHHcCCCCCCc-cccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            999999874   344445555554443332 334689999999999999999999999999875

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=264.53  Aligned_cols=204  Identities=21%  Similarity=0.204  Sum_probs=169.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      .....|+..+.++.+||||+++++++..++..++|||+++++|.+.+......+++..+..++.|++.||.|||+.|++|
T Consensus       101 ~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  180 (311)
T 3p1a_A          101 ARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVH  180 (311)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence            35667777777776699999999999999999999999999999999877778999999999999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCC
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGK  170 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~  170 (257)
                      +||||+||+++.+   +.+||+|||++........    .....||+.|+|||++.+ .++.++||||||+++|+|++|.
T Consensus       181 ~Dikp~NIll~~~---~~~kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~  252 (311)
T 3p1a_A          181 LDVKPANIFLGPR---GRCKLGDFGLLVELGTAGA----GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNM  252 (311)
T ss_dssp             CCCSGGGEEECGG---GCEEECCCTTCEECC----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHEEECCC---CCEEEccceeeeecccCCC----CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCC
Confidence            9999999999876   8999999999876543321    134568999999999887 6899999999999999999997


Q ss_pred             CCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         171 LPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       171 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .|+...   ..      ..........+.....+++.+.++|.+||+.||++|||++++++
T Consensus       253 ~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          253 ELPHGG---EG------WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             CCCSSH---HH------HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCCc---cH------HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            666542   11      11112223345556789999999999999999999999999875

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.8e-41  Score=276.13  Aligned_cols=206  Identities=23%  Similarity=0.245  Sum_probs=173.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ..+.+.+|+.+++.+. ||||+++++++.+....++||||++++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        52 ~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~lv~E~~~g~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~gi  129 (336)
T 3h4j_B           52 MHMRVEREISYLKLLR-HPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVE-KKRMTEDEGRRFFQQIICAIEYCHRHKI  129 (336)
T ss_dssp             CSHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEECCCCEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCeEEEEEEeCCEEEEEEECCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3457899999999998 9999999999999999999999999999999875 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l~  167 (257)
                      +||||||+||+++.+   +.++|+|||++.......    ......|++.|+|||++.+..+ +.++||||+|+++|+|+
T Consensus       130 vH~Dlkp~NIll~~~---~~~kl~DFG~s~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll  202 (336)
T 3h4j_B          130 VHRDLKPENLLLDDN---LNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVML  202 (336)
T ss_dssp             CCCCCSTTTEEECTT---CCEEECCSSCTBTTTTSB----TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHH
T ss_pred             EecCCchhhEEEcCC---CCEEEEEeccceeccCCc----ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHH
Confidence            999999999999866   899999999987654322    2245679999999999988776 68999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||..........   .+     .......+..+|+.+.++|++||..||.+|||++++++
T Consensus       203 ~g~~Pf~~~~~~~~~~---~i-----~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          203 VGRLPFDDEFIPNLFK---KV-----NSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             HSSCSSBCSSSTTCBC---CC-----CSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             hCCCCCCCccHHHHHH---HH-----HcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            9999998743322110   00     11111223568999999999999999999999999976

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.5e-39  Score=270.03  Aligned_cols=210  Identities=19%  Similarity=0.265  Sum_probs=176.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++.+||||+++++++......++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus       143 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~~gi  221 (365)
T 2y7j_A          143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLHANNI  221 (365)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4567899999999966999999999999999999999999 8999999985 4679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC------CCCCCcchHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW------LDQSPRDDLEALCYT  162 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~~Dv~slg~~  162 (257)
                      +|+||+|+||+++.+   +.++|+|||++.......    ......|++.|+|||++.+      ..++.++||||||++
T Consensus       222 ~H~Dlkp~NIl~~~~---~~ikl~DfG~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i  294 (365)
T 2y7j_A          222 VHRDLKPENILLDDN---MQIRLSDFGFSCHLEPGE----KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVI  294 (365)
T ss_dssp             ECSCCSGGGEEECTT---CCEEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCC---CCEEEEecCcccccCCCc----ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHH
Confidence            999999999999866   899999999987765432    1245679999999999863      257889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|+|++|..||...   .....+..+......... .....+|+.+.++|.+||+.||++||+++++++
T Consensus       295 l~ell~g~~pf~~~---~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          295 LFTLLAGSPPFWHR---RQILMLRMIMEGQYQFSS-PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHHHHHSSCSSCCS---SHHHHHHHHHHTCCCCCH-HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHCCCCCCCC---CHHHHHHHHHhCCCCCCC-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            99999999999873   333344444444333332 233678999999999999999999999999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.3e-40  Score=269.13  Aligned_cols=207  Identities=19%  Similarity=0.268  Sum_probs=169.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.+++++. ||||+++++++..  ....++||||+ +++|.++..  ...+++..+..++.|++.||.|||+.
T Consensus        80 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~  156 (298)
T 2zv2_A           80 IEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLHYQ  156 (298)
T ss_dssp             -CHHHHHHHHHHTCC-CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            467899999999998 9999999999986  56799999999 888887654  56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC---CCcchHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ---SPRDDLEALCYTL  163 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~---~~~~Dv~slg~~l  163 (257)
                      |++|+||||+||+++.+   +.++|+|||++........   ......+++.|+|||.+.+...   +.++||||||+++
T Consensus       157 ~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l  230 (298)
T 2zv2_A          157 KIIHRDIKPSNLLVGED---GHIKIADFGVSNEFKGSDA---LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL  230 (298)
T ss_dssp             TEECCCCCGGGEEECTT---SCEEECCCTTCEECSSSSC---EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred             CeeccCCCHHHEEECCC---CCEEEecCCCccccccccc---cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence            99999999999999866   8999999999987654321   1134578999999999987653   6789999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||....   .......+.......+   ....+++.+.++|.+||+.||++||+++++++
T Consensus       231 ~~l~~g~~pf~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          231 YCFVFGQCPFMDER---IMCLHSKIKSQALEFP---DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHSSCSSCCSS---HHHHHHHHHHCCCCCC---SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHCCCCCCCcc---HHHHHHHHhcccCCCC---CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            99999999998642   2222233332222211   12578999999999999999999999998864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=5.3e-40  Score=263.06  Aligned_cols=204  Identities=21%  Similarity=0.291  Sum_probs=171.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++..+. ||||+++++++.+....++||||+ +++|.+.+.. ...+++..+..++.|++.||.+||+.|+
T Consensus        53 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i  130 (279)
T 3fdn_A           53 EHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRV  130 (279)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHcCC-CCCCcchhheEecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            456888999999998 999999999999999999999999 8999999985 4679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.......     .....+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       131 ~H~dlkp~Nili~~~---~~~~l~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  202 (279)
T 3fdn_A          131 IHRDIKPENLLLGSA---GELKIADFGWSVHAPSSR-----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV  202 (279)
T ss_dssp             EECCCCGGGEEECTT---SCEEECSCCEESCC-------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             ecccCChHhEEEcCC---CCEEEEeccccccCCccc-----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHH
Confidence            999999999999766   899999999875433221     144578999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||....   .......+......     .+..+++.+.++|.+||+.||++||+++++++
T Consensus       203 g~~p~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          203 GKPPFEANT---YQETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             SSCTTCCSS---HHHHHHHHHHTCCC-----CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCc---HHHHHHHHHhCCCC-----CCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            999998743   33333333332222     22568899999999999999999999999987

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=4.4e-40  Score=272.73  Aligned_cols=213  Identities=17%  Similarity=0.225  Sum_probs=172.6

Q ss_pred             ccccHHHHHHHHHhc----CCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLH----GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~----~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+.+..|+.++..+.    +||||+++++++...+..++|||+++++|.+++.... ..++...+..++.|++.||.|||
T Consensus        75 ~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH  154 (360)
T 3llt_A           75 TRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR  154 (360)
T ss_dssp             HHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            456788999999997    5999999999999999999999999999999998643 45999999999999999999999


Q ss_pred             hCCccccCCCCCceEeecc----------------------CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccCh
Q psy2769          85 RKKIVHRDIKPDNFLMGVR----------------------ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASV  142 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~----------------------~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aP  142 (257)
                      +.|++||||||+||+++.+                      ...+.++|+|||++.......      ....+++.|+||
T Consensus       155 ~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~------~~~~gt~~y~aP  228 (360)
T 3llt_A          155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH------GSIINTRQYRAP  228 (360)
T ss_dssp             HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC------CSCCSCGGGCCH
T ss_pred             HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC------cCccCcccccCc
Confidence            9999999999999999741                      124789999999997643321      456789999999


Q ss_pred             hHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCCh-------------------------
Q psy2769         143 NAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP-------------------------  197 (257)
Q Consensus       143 E~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  197 (257)
                      |++.+..++.++||||||+++|+|++|..||......   ..+..+.....+.+.                         
T Consensus       229 E~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p  305 (360)
T 3llt_A          229 EVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM---EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWP  305 (360)
T ss_dssp             HHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTT
T ss_pred             HHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHH---HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCc
Confidence            9999999999999999999999999999999874332   222323222111111                         


Q ss_pred             ----------------hhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         198 ----------------EAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       198 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                                      +......++.+.++|.+||+.||++|||++++++
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          306 ENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             TTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                            0111223477889999999999999999999864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=7.1e-41  Score=273.54  Aligned_cols=223  Identities=20%  Similarity=0.197  Sum_probs=172.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCC----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGD----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      .....|+.++.+++ ||||+++++++....    ..++||||+ +++|.+++..  ..+++..+..++.|++.||.|||+
T Consensus        63 ~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~al~~LH~  139 (322)
T 3soc_A           63 WQNEYEVYSLPGMK-HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLAYLHE  139 (322)
T ss_dssp             HHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcCC-CCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHh
Confidence            35566888899998 999999999998754    369999999 8999999984  569999999999999999999999


Q ss_pred             C----------CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-----CC
Q psy2769          86 K----------KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-----DQ  150 (257)
Q Consensus        86 ~----------~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-----~~  150 (257)
                      .          |++|+||||+||+++.+   +.+||+|||++.......... ......+++.|+|||++.+.     .+
T Consensus       140 ~~~~l~~~~~~~ivH~Dlkp~Nill~~~---~~~kL~DFg~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~  215 (322)
T 3soc_A          140 DIPGLKDGHKPAISHRDIKSKNVLLKNN---LTACIADFGLALKFEAGKSAG-DTHGQVGTRRYMAPEVLEGAINFQRDA  215 (322)
T ss_dssp             CEEEETTEEECEEECSCCSGGGEEECTT---CCEEECCCTTCEEECTTSCCC-CCTTCCCCGGGCCHHHHTTCCCCCHHH
T ss_pred             hccccccccCCCEEeCCCChHhEEECCC---CeEEEccCCcccccccccCcc-ccccCccCccccCHhhcccccccCcCC
Confidence            9          99999999999999766   899999999998765543222 22446799999999999874     34


Q ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCCCCcc-------------HHHHHHHHHHHHhhCChhhhh--cCCcHHHHHHHHHH
Q psy2769         151 SPRDDLEALCYTLVYFLRGKLPWQSIKSDN-------------EETRMQRVTEMKLTMTPEAIC--EGTPPEFAEFLRYC  215 (257)
Q Consensus       151 ~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~  215 (257)
                      +.++||||||+++|+|++|..||.+.....             .......+.........+...  ...++.+.++|.+|
T Consensus       216 ~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  295 (322)
T 3soc_A          216 FLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEEC  295 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHH
T ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHH
Confidence            567899999999999999999998643321             111111111111110111100  12345599999999


Q ss_pred             hcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         216 RGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       216 l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      |+.||++|||+.++++.|+++.+..
T Consensus       296 l~~dP~~Rps~~ell~~L~~l~~~~  320 (322)
T 3soc_A          296 WDHDAEARLSAGCVGERITQMQRLT  320 (322)
T ss_dssp             TCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ccCChhhCcCHHHHHHHHHHHHHHh
Confidence            9999999999999999999987754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.8e-40  Score=271.76  Aligned_cols=214  Identities=17%  Similarity=0.243  Sum_probs=175.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+|+.++..+.+||||+++++++......++||||+ +++|.+++... ...+++..+..++.|++.||.+||+.|
T Consensus        72 ~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g  151 (327)
T 3lm5_A           72 RAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN  151 (327)
T ss_dssp             HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4578899999999998899999999999999999999999 89999988632 467999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.....+.++|+|||++........    .....+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       152 ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  227 (327)
T 3lm5_A          152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE----LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL  227 (327)
T ss_dssp             EECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             eecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc----cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHH
Confidence            99999999999998743458999999999987644321    14457899999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||....   .......+...... ........+++.+.++|.+||+.||++||+++++++
T Consensus       228 ~g~~pf~~~~---~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          228 THTSPFVGED---NQETYLNISQVNVD-YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HSSCSSCCSS---HHHHHHHHHHTCCC-CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hCCCCCCCCC---chHHHHHHHhcccc-cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            9999998743   33333333333322 233334678999999999999999999999998864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=7.6e-40  Score=274.05  Aligned_cols=218  Identities=15%  Similarity=0.158  Sum_probs=170.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      .+.+.+|+.+++.+. ||||+++++++...+..++||||+ +++|.+++... ...+++..+..++.|++.||.|||+.|
T Consensus        70 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  148 (389)
T 3gni_B           70 VTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG  148 (389)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            456788999999998 999999999999999999999999 99999999864 367999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC----CCCCccCCCCcccccChhHhcC--CCCCCcchHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP----PRIRTRGLTGTARYASVNAHQW--LDQSPRDDLEALCY  161 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~----~~~~~~~~~~~~~~~aPE~~~~--~~~~~~~Dv~slg~  161 (257)
                      |+||||||+||+++.+   +.++|+|||.+........    .........+++.|+|||++.+  ..++.++||||||+
T Consensus       149 ivHrDlkp~NIll~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  225 (389)
T 3gni_B          149 YVHRSVKASHILISVD---GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI  225 (389)
T ss_dssp             EECCCCSGGGEEECTT---CCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHH
T ss_pred             eecCCCCHHHEEEcCC---CCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHH
Confidence            9999999999999766   8999999998765432211    1111133478899999999987  57899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHH--------------------------------------HHhhCChhhhhcC
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTE--------------------------------------MKLTMTPEAICEG  203 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~  203 (257)
                      ++|+|++|..||.+...............                                      .............
T Consensus       226 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (389)
T 3gni_B          226 TACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRT  305 (389)
T ss_dssp             HHHHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------------
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccc
Confidence            99999999999987554432211100000                                      0000011123356


Q ss_pred             CcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         204 TPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       204 ~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +++.+.++|.+||+.||++|||++++++
T Consensus       306 ~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          306 FSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            8899999999999999999999999975

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2e-40  Score=285.06  Aligned_cols=213  Identities=23%  Similarity=0.313  Sum_probs=180.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++++. ||||+++++++......++|||++ +++|.+.+.. ...+++..+..++.|++.||.|||++
T Consensus        68 ~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~  145 (484)
T 3nyv_A           68 TDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIIS-RKRFSEVDAARIIRQVLSGITYMHKN  145 (484)
T ss_dssp             SCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-CSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567899999999997 999999999999999999999999 9999999884 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++||||||+||+++.....+.++|+|||++.......    ......||+.|+|||++.+ .++.++||||+|+++|+|
T Consensus       146 ~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~l  220 (484)
T 3nyv_A          146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK----KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYIL  220 (484)
T ss_dssp             TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHH
T ss_pred             CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHH
Confidence            99999999999999754455899999999987654432    1134569999999999987 689999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.+.   +....+..+.........+ .+..+|+.+.++|.+||+.||.+|||++++++
T Consensus       221 l~g~~pf~~~---~~~~~~~~i~~~~~~~~~~-~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          221 LSGCPPFNGA---NEYDILKKVEKGKYTFELP-QWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHCCCCCCSG-GGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHCCCCCCCC---CHHHHHHHHHcCCCCCCCc-ccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            9999999874   3444455555544443332 23578999999999999999999999999976

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.1e-40  Score=267.64  Aligned_cols=224  Identities=18%  Similarity=0.243  Sum_probs=176.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCC--ccEEEEecc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD--YNILVMELL-GPSLEDLFQYCS--KRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~--~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ..+.+.+|+.+++++. ||||+++++++....  ..++||||+ +++|.+++....  ..+++..+..++.|++.||.||
T Consensus        50 ~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~L  128 (319)
T 4euu_A           50 PVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL  128 (319)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcC-CCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence            3567789999999998 999999999987654  789999999 899999998642  2399999999999999999999


Q ss_pred             HhCCccccCCCCCceEeecc-CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc--------CCCCCCcc
Q psy2769          84 HRKKIVHRDIKPDNFLMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ--------WLDQSPRD  154 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~-~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~--------~~~~~~~~  154 (257)
                      |+.|++|+||||+||++..+ ...+.++|+|||++........    .....+++.|+|||++.        +..++.++
T Consensus       129 H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~  204 (319)
T 4euu_A          129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV  204 (319)
T ss_dssp             HHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC----BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTH
T ss_pred             HHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc----eeecccCCCccCHHHhhhccccccccCCCCcHH
Confidence            99999999999999998322 2336799999999987644321    14457899999999986        56788999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHHHHHHHhhCC--------------------hhhhhcCCcHHHHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDN-EETRMQRVTEMKLTMT--------------------PEAICEGTPPEFAEFLR  213 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~li~  213 (257)
                      ||||||+++|+|++|..||....... ....+..+........                    .......+++.+.++++
T Consensus       205 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~  284 (319)
T 4euu_A          205 DLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLA  284 (319)
T ss_dssp             HHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHH
Confidence            99999999999999999998654432 2333333433321100                    00112345667999999


Q ss_pred             HHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         214 YCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       214 ~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      +||+.||++||+++++++-..+-.
T Consensus       285 ~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          285 NILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             HHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             HhccCChhhhccHHHhhhccHHHh
Confidence            999999999999999988776544

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.1e-40  Score=269.45  Aligned_cols=227  Identities=17%  Similarity=0.160  Sum_probs=180.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC--ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD--YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~--~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+.+.+|+.++++++ ||||+++++++...+  ..++|||++ +++|.+++......+++..+..++.|++.||.+||+.
T Consensus        86 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  164 (326)
T 2w1i_A           86 LRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK  164 (326)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCC-CCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            457899999999997 999999999886543  789999999 8999999997666799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||||+||+++.+   +.++|+|||++.................++..|+|||.+.+..++.++||||||+++|+|
T Consensus       165 ~ivH~dikp~NIli~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  241 (326)
T 2w1i_A          165 RYIHRDLATRNILVENE---NRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL  241 (326)
T ss_dssp             TEECSCCCGGGEEEEET---TEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             CEeccCCCcceEEEcCC---CcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHH
Confidence            99999999999999876   899999999998765443211112344577789999999988889999999999999999


Q ss_pred             HhCCCCCCCCCCc---------cHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         167 LRGKLPWQSIKSD---------NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       167 ~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      ++|..||......         ........+............+..+|+.+.++|.+||+.||++||++.++++.|+++.
T Consensus       242 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          242 FTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             HHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999998753110         0001111111111111122234678999999999999999999999999999999987


Q ss_pred             Hhc
Q psy2769         238 ENK  240 (257)
Q Consensus       238 ~~~  240 (257)
                      ++.
T Consensus       322 ~~l  324 (326)
T 2w1i_A          322 DQM  324 (326)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=4.9e-40  Score=267.43  Aligned_cols=220  Identities=17%  Similarity=0.253  Sum_probs=174.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-----ccEEEEecc-CCCHHHHHHHh-----cCCCCHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-----YNILVMELL-GPSLEDLFQYC-----SKRFSLKTVLMLADQMIS   78 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-----~~~~v~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~~~~i~~   78 (257)
                      .+.+.+|+.++.++. ||||+++++++....     ..++|||++ +++|.+++...     ...+++..+..++.|++.
T Consensus        80 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~  158 (313)
T 3brb_A           80 IEEFLSEAACMKDFS-HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL  158 (313)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCC-CCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHH
Confidence            356889999999998 999999999987654     359999999 89999999642     356999999999999999


Q ss_pred             HHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHH
Q psy2769          79 RLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEA  158 (257)
Q Consensus        79 ~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~s  158 (257)
                      ||.|||+.|++|+||||+||+++.+   +.++|+|||++.......... ......+++.|+|||.+.+..++.++||||
T Consensus       159 aL~~LH~~~ivH~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  234 (313)
T 3brb_A          159 GMEYLSNRNFLHRDLAARNCMLRDD---MTVCVADFGLSKKIYSGDYYR-QGRIAKMPVKWIAIESLADRVYTSKSDVWA  234 (313)
T ss_dssp             HHHHHHTTTCCCCCCSGGGEEECTT---SCEEECSCSCC-----------------CCGGGSCHHHHHSSCCCHHHHHHH
T ss_pred             HHHHHHhCCcccCCCCcceEEEcCC---CcEEEeecCcceecccccccC-cccccCCCccccCchhhcCCCccchhhhHH
Confidence            9999999999999999999999766   889999999987654432111 113445778999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         159 LCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       159 lg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      ||+++|+|++ |..||..........   .+..    ......+..+++.+.+++.+||+.||++||++.++++.|++++
T Consensus       235 lG~il~el~~~g~~p~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          235 FGVTMWEIATRGMTPYPGVQNHEMYD---YLLH----GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             HHHHHHHHHTTSCCSSTTCCGGGHHH---HHHT----TCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCccCCHHHHHH---HHHc----CCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999 899998765443322   1211    1122334678999999999999999999999999999999998


Q ss_pred             Hhcc
Q psy2769         238 ENKE  241 (257)
Q Consensus       238 ~~~~  241 (257)
                      ++..
T Consensus       308 ~~lp  311 (313)
T 3brb_A          308 ESLP  311 (313)
T ss_dssp             HHC-
T ss_pred             HhcC
Confidence            8764

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.1e-40  Score=281.02  Aligned_cols=208  Identities=18%  Similarity=0.208  Sum_probs=167.0

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR-   85 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-   85 (257)
                      .....+.+|+.+++.+. ||||+++++++...+..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+ 
T Consensus       190 ~~~~~~~~e~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~  267 (446)
T 4ejn_A          190 DEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSE  267 (446)
T ss_dssp             -----------CCCCCS-CTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-CCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            34566788999999998 999999999999999999999999 9999999985 5679999999999999999999998 


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .||+||||||+||+++.+   +.++|+|||++.......   .......||+.|+|||++.+..++.++||||||+++|+
T Consensus       268 ~giiHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  341 (446)
T 4ejn_A          268 KNVVYRDLKLENLMLDKD---GHIKITDFGLCKEGIKDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE  341 (446)
T ss_dssp             TCCCCCCCCGGGEEECSS---SCEEECCCCCCCTTCC--------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHH
T ss_pred             CCEEECCCCHHHEEECCC---CCEEEccCCCceeccCCC---cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHH
Confidence            999999999999999866   899999999986533221   12245679999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      |++|..||...   +.......+......     .+..+++.+.++|.+||+.||++||     +++++++
T Consensus       342 ll~g~~Pf~~~---~~~~~~~~i~~~~~~-----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          342 MMCGRLPFYNQ---DHEKLFELILMEEIR-----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHSSCSSCCS---SHHHHHHHHHHCCCC-----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HhhCCCCCCCC---CHHHHHHHHHhCCCC-----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            99999999874   333333444333322     2367899999999999999999999     8888764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.4e-40  Score=266.33  Aligned_cols=220  Identities=17%  Similarity=0.294  Sum_probs=181.2

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+.+|+.+++.+. ||||+++++++.. +..++|||++ +++|.+++... ...+++..+..++.|++.||.+||+
T Consensus        50 ~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  127 (279)
T 1qpc_A           50 MSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE  127 (279)
T ss_dssp             SCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCC-CcCcceEEEEEcC-CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34567899999999997 9999999999874 4589999999 99999998743 2369999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||+|+||+++.+   +.++|+|||.+........  .......++..|+|||.+.+..++.++||||||+++++
T Consensus       128 ~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  202 (279)
T 1qpc_A          128 RNYIHRDLRAANILVSDT---LSCKIADFGLARLIEDNEY--TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE  202 (279)
T ss_dssp             TTEECSCCSGGGEEECTT---SCEEECCCTTCEECSSSCE--ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             CCeeccCCCHhhEEEcCC---CCEEECCCcccccccCccc--ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHH
Confidence            999999999999999765   8899999999987654321  11133456788999999998888999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |++ |..||.....   .+....+...    ........+|+.+.+++..||+.||++||+++++++.|++++....
T Consensus       203 l~~~g~~p~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          203 IVTHGRIPYPGMTN---PEVIQNLERG----YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             HHTTTCCSSTTCCH---HHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             HHhCCCCCCcccCH---HHHHHHHhcc----cCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence            999 9999987432   2222332221    1122236789999999999999999999999999999999988654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.1e-39  Score=281.61  Aligned_cols=207  Identities=21%  Similarity=0.273  Sum_probs=174.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..+.+.+|+.++.++. ||||+++++++.+....|+||||+ |++|.+++...   ...+++..+..++.|++.||.|||
T Consensus       228 ~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH  306 (543)
T 3c4z_A          228 GYQGAMVEKKILAKVH-SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH  306 (543)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence            3456889999999997 999999999999999999999999 99999998853   346999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      ++||+||||||+||+++.+   +.+||+|||++........   ......||+.|+|||++.+..++.++|+|||||++|
T Consensus       307 ~~gIvHrDLKP~NILl~~~---g~vkL~DFGla~~~~~~~~---~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvily  380 (543)
T 3c4z_A          307 QRNIIYRDLKPENVLLDDD---GNVRISDLGLAVELKAGQT---KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY  380 (543)
T ss_dssp             HTTEECCCCCGGGEEECTT---SCEEECCCTTCEECCTTCC---CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred             HcCCcccCCChHHEEEeCC---CCEEEeecceeeeccCCCc---ccccccCCccccChhhhcCCCCChHHhcCcchHHHH
Confidence            9999999999999999876   8999999999987644321   124457999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCc-cHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         165 YFLRGKLPWQSIKSD-NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                      +|++|..||...... ........+.....     ..+..+|+.+.++|.+||..||++||++.
T Consensus       381 elltG~~PF~~~~~~~~~~~~~~~i~~~~~-----~~p~~~s~~~~~li~~lL~~dP~~R~~~~  439 (543)
T 3c4z_A          381 EMIAARGPFRARGEKVENKELKQRVLEQAV-----TYPDKFSPASKDFCEALLQKDPEKRLGFR  439 (543)
T ss_dssp             HHHHSSCSSCCTTCCCCHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred             HHHhCCCCCCCCccchhHHHHHHHHhhccc-----CCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence            999999999875433 23333333333222     22367899999999999999999999763

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-39  Score=269.07  Aligned_cols=212  Identities=17%  Similarity=0.135  Sum_probs=174.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.+++.+. ||||+++++++......++||||++++|.+++......+++..+..++.|++.||.|||+.|++
T Consensus        56 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iv  134 (346)
T 1ua2_A           56 NRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL  134 (346)
T ss_dssp             CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHHHhhCC-CCCCCeEEEEEeeCCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            356889999999998 9999999999999999999999997799998886556799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      |+||||+||+++.+   +.++|+|||++........   ......+++.|+|||.+.+. .++.++||||||+++|+|++
T Consensus       135 H~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  208 (346)
T 1ua2_A          135 HRDLKPNNLLLDEN---GVLKLADFGLAKSFGSPNR---AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL  208 (346)
T ss_dssp             CCCCCGGGEEECTT---CCEEECCCGGGSTTTSCCC---CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHEEEcCC---CCEEEEecccceeccCCcc---cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHH
Confidence            99999999999866   8999999999876543321   11445789999999999765 47889999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCC-----------------------hhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMT-----------------------PEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      |.+||.+..   ....+..+........                       .......+++.+.++|.+||..||++|||
T Consensus       209 g~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  285 (346)
T 1ua2_A          209 RVPFLPGDS---DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  285 (346)
T ss_dssp             SSCSSCCSS---HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             CCCCCCCCC---HHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence            999998743   3333333333221111                       11223567889999999999999999999


Q ss_pred             hHHHHH
Q psy2769         226 YGKLRD  231 (257)
Q Consensus       226 ~~~~~~  231 (257)
                      ++++++
T Consensus       286 ~~ell~  291 (346)
T 1ua2_A          286 ATQALK  291 (346)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999876

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.4e-40  Score=270.35  Aligned_cols=220  Identities=22%  Similarity=0.298  Sum_probs=172.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++..++..++++|++ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        78 ~~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i  155 (309)
T 2h34_A           78 RTRMQREARTAGRLQ-EPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRR-QGPLAPPRAVAIVRQIGSALDAAHAAGA  155 (309)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhhcC-CCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence            367889999999997 999999999999999999999999 8899999985 4679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.........  ......+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       156 ~H~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  230 (309)
T 2h34_A          156 THRDVKPENILVSAD---DFAYLVDFGIASATTDEKLT--QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLT  230 (309)
T ss_dssp             CCSCCCGGGEEECTT---SCEEECSCCC------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHH
T ss_pred             CcCCCChHHEEEcCC---CCEEEecCccCccccccccc--cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHH
Confidence            999999999999866   88999999998765432211  1134568999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-ChHHHHHHHHHHHHhcc
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-NYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~~~~~l~~~~~~~~  241 (257)
                      |..||....   .. .+..... ............+|+.+.++|.+||+.||++|| +++++++.|++++....
T Consensus       231 g~~pf~~~~---~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          231 GSPPYQGDQ---LS-VMGAHIN-QAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             SSCSSCSCH---HH-HHHHHHH-SCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             CCCCCCCch---HH-HHHHHhc-cCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            999998732   21 1111111 111123344578999999999999999999999 99999999999888665

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3.7e-40  Score=281.37  Aligned_cols=205  Identities=21%  Similarity=0.262  Sum_probs=175.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++.+. ||||+++++++.+....++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        60 ~~~~~~Ei~~l~~l~-HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~~LH~~gi  137 (476)
T 2y94_A           60 VGKIRREIQNLKLFR-HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICK-NGRLDEKESRRLFQQILSGVDYCHRHMV  137 (476)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTS-SSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            457889999999998 999999999999999999999999 9999999874 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l~  167 (257)
                      +||||||+||+++.+   +.++|+|||++.......    ......|++.|+|||++.+..+ +.++||||+|+++|+|+
T Consensus       138 vHrDLkp~NIll~~~---~~vkL~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell  210 (476)
T 2y94_A          138 VHRDLKPENVLLDAH---MNAKIADFGLSNMMSDGE----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL  210 (476)
T ss_dssp             ECSCCSGGGEEECTT---CCEEECCCSSCEECCTTC----CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHH
T ss_pred             CcccccHHHEEEecC---CCeEEEeccchhhccccc----cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHh
Confidence            999999999999866   889999999998764432    1245679999999999998765 68999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||......   .....+......     .+..+++.+.++|++||..||++|||++++++
T Consensus       211 tG~~Pf~~~~~~---~~~~~i~~~~~~-----~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          211 CGTLPFDDDHVP---TLFKKICDGIFY-----TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HSSCSSCCSSSH---HHHHHHHTTCCC-----CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hCCCCCCCCCHH---HHHHHHhcCCcC-----CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            999999874332   233333333222     22568899999999999999999999999986

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.6e-39  Score=263.71  Aligned_cols=223  Identities=17%  Similarity=0.230  Sum_probs=177.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC--SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+.+|+.++.+++ ||||+++++++...+..+++||++ +++|.+++...  ...+++..+..++.|++.||.+||+
T Consensus        73 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  151 (307)
T 2nru_A           73 LKQQFDQEIKVMAKCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE  151 (307)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            4567899999999998 999999999999999999999999 99999999853  3469999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||+|+||+++.+   +.++|+|||++.......... ......+++.|+|||.+.+ .++.++||||||+++|+
T Consensus       152 ~~i~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~  226 (307)
T 2nru_A          152 NHHIHRDIKSANILLDEA---FTAKISDFGLARASEKFAQTV-MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLE  226 (307)
T ss_dssp             TTEECSCCCGGGEEECTT---CCEEECCCTTCEECCSCSSCE-ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEEcCC---CcEEEeecccccccccccccc-cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHH
Confidence            999999999999999766   899999999987654432211 1244578999999999876 47889999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHH-HHHHH------hhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQR-VTEMK------LTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLL  237 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  237 (257)
                      |++|..||...........+.. +....      ............++.+.+++.+||+.||.+||++.++++.|+++.
T Consensus       227 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          227 IITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            9999999987554332111111 11100      000001111234567999999999999999999999999999874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=8.7e-40  Score=273.57  Aligned_cols=211  Identities=21%  Similarity=0.320  Sum_probs=168.3

Q ss_pred             ccccHHHHHHHHHhcC-CCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHG-APGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~-~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++.+ ||||+++++++......++|||+.+++|.+++.. ...+++..+..++.|++.||.|||+.||
T Consensus        98 ~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i  176 (390)
T 2zmd_A           98 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGI  176 (390)
T ss_dssp             HHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEecCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            4678999999999984 6999999999999999999999669999999985 5578999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----------CCCCCcchHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----------LDQSPRDDLE  157 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~Dv~  157 (257)
                      +||||||+||+++ +   +.+||+|||++.......... ......||+.|+|||++.+           ..++.++|||
T Consensus       177 vHrDlkp~NIll~-~---~~~kl~DFG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diw  251 (390)
T 2zmd_A          177 VHSDLKPANFLIV-D---GMLKLIDFGIANQMQPDTTSV-VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW  251 (390)
T ss_dssp             CCCCCCGGGEEES-S---SCEEECCCSSSCCC----------CCSCCCGGGCCHHHHHCC------------CCHHHHHH
T ss_pred             eecCCCHHHEEEE-C---CeEEEEecCccccccCCCccc-cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHH
Confidence            9999999999994 2   689999999997654432211 1145679999999999975           3578899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |||+++|+|++|..||.....  ....+..+....   .....+...++.+.++|.+||..||++||++.++++
T Consensus       252 SlGvil~ell~G~~Pf~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          252 SLGCILYYMTYGKTPFQQIIN--QISKLHAIIDPN---HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHHHHHHHHHSSCTTTTCCC--HHHHHHHHHCTT---SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHCCCcchhhhH--HHHHHHHHhCcc---ccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            999999999999999986432  222222222211   112223456788999999999999999999999975

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2e-39  Score=263.57  Aligned_cols=211  Identities=18%  Similarity=0.188  Sum_probs=166.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++++. ||||+++++++...+..++||||+ +++|.+++. ....+++..+..++.|++.||.+||+.|+
T Consensus        46 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~i~~~l~~~l~~lH~~~i  123 (311)
T 4agu_A           46 KKIALREIRMLKQLK-HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR-YQRGVPEHLVKSITWQTLQAVNFCHKHNC  123 (311)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-TSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCccchhheeecCCeEEEEEEeCCCchHHHHHh-hhcCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            456788999999998 999999999999999999999999 777777766 45679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||||+||+++.+   +.++|+|||.+.........   .....+++.|+|||.+.+ ..++.++||||+|+++|+|+
T Consensus       124 vH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~  197 (311)
T 4agu_A          124 IHRDVKPENILITKH---SVIKLCDFGFARLLTGPSDY---YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL  197 (311)
T ss_dssp             ECCCCSGGGEEECTT---SCEEECCCTTCEECC---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             cCCCCChhhEEEcCC---CCEEEeeCCCchhccCcccc---cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence            999999999999766   89999999999776433211   134578999999999976 56799999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhC--------------------------ChhhhhcCCcHHHHHHHHHHhcCCCC
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTM--------------------------TPEAICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      +|..||.+....+..   ..+.......                          ......+.+++.+.+++.+||+.||+
T Consensus       198 ~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  274 (311)
T 4agu_A          198 SGVPLWPGKSDVDQL---YLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPT  274 (311)
T ss_dssp             HSSCSCCCSSHHHHH---HHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTT
T ss_pred             hCCCCCCCCCHHHHH---HHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChh
Confidence            999999875433322   2222211110                          01112256888999999999999999


Q ss_pred             CCCChHHHHH
Q psy2769         222 EEPNYGKLRD  231 (257)
Q Consensus       222 ~Rp~~~~~~~  231 (257)
                      +|||++++++
T Consensus       275 ~Rpt~~ell~  284 (311)
T 4agu_A          275 ERLTCEQLLH  284 (311)
T ss_dssp             TSCCHHHHHT
T ss_pred             hcCCHHHHhc
Confidence            9999999975

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-39  Score=268.60  Aligned_cols=211  Identities=21%  Similarity=0.308  Sum_probs=167.0

Q ss_pred             ccccHHHHHHHHHhcCC-CCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGA-PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~-~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+.+| |||+++++++..+...++|||+.+++|.+++.. ...+++..+..++.|++.||.|||+.||
T Consensus        51 ~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i  129 (343)
T 3dbq_A           51 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGI  129 (343)
T ss_dssp             HHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            35788999999999843 999999999999999999999779999999985 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----------CCCCCcchHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----------LDQSPRDDLE  157 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~Dv~  157 (257)
                      +||||||+||+++ +   +.++|+|||++.......... ......||+.|+|||++.+           ..++.++|||
T Consensus       130 iHrDikp~NIll~-~---~~~kl~DFG~a~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diw  204 (343)
T 3dbq_A          130 VHSDLKPANFLIV-D---GMLKLIDFGIANQMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW  204 (343)
T ss_dssp             CCCCCCGGGEEEE-T---TEEEECCCSSSCCC-------------CCCCSSCCHHHHHHCC-----------CCHHHHHH
T ss_pred             ecCCCCcceEEEE-C---CcEEEeecccccccCcccccc-cCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHH
Confidence            9999999999996 3   689999999997654432211 1135579999999999865           5678899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |||+++|+|++|..||......  ...+..+.   ........+...++.+.+++..||+.||.+|||+.++++
T Consensus       205 slG~il~ell~g~~pf~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          205 SLGCILYYMTYGKTPFQQIINQ--ISKLHAII---DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             HHHHHHHHHHHSSCTTTTCCSH--HHHHHHHH---CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCCcchhhhhH--HHHHHHHh---cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            9999999999999999875332  12222221   112222333567788999999999999999999999975

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.9e-39  Score=263.64  Aligned_cols=222  Identities=19%  Similarity=0.242  Sum_probs=173.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..+.+.+|+.++.++. ||||+++++++...+..++|||++ +++|.+++...   ...+++..+..++.|++.||.+||
T Consensus        75 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  153 (310)
T 2wqm_A           75 ARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH  153 (310)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence            3457889999999998 999999999999999999999999 88999999753   466999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.|++|+||+|+||+++.+   +.++|+|||++........   ......+++.|+|||.+.+..++.++||||||+++|
T Consensus       154 ~~~i~H~dl~p~NIl~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~  227 (310)
T 2wqm_A          154 SRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLY  227 (310)
T ss_dssp             HTTCCCCCCCGGGEEECTT---SCEEECCC---------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             hCCeeCCCCcHHHEEEcCC---CCEEEEeccceeeecCCCc---cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHH
Confidence            9999999999999999766   8999999999876543221   113456899999999999989999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      +|++|..||...... .......+.....+   +.....+|+.+.+++.+||+.||++||+++++++.|+++.....
T Consensus       228 ~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~  300 (310)
T 2wqm_A          228 EMAALQSPFYGDKMN-LYSLCKKIEQCDYP---PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA  300 (310)
T ss_dssp             HHHHSSCTTC---CC-HHHHHHHHHTTCSC---CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHHhCCCCCcccchh-HHHHHHHhhcccCC---CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence            999999999864322 22222222222111   11125688999999999999999999999999999999988765

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.3e-39  Score=267.47  Aligned_cols=207  Identities=21%  Similarity=0.272  Sum_probs=176.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++..+. ||||+++++++.+.+..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|
T Consensus        84 ~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~  161 (335)
T 2owb_A           84 QREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNR  161 (335)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3457889999999997 999999999999999999999999 8999998884 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||++........   ......+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       162 ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  235 (335)
T 2owb_A          162 VIHRDLKLGNLFLNED---LEVKIGDFGLATKVEYDGE---RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL  235 (335)
T ss_dssp             EECSCCCGGGEEECTT---CCEEECCCTTCEECCSTTC---CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHH
T ss_pred             CEecCCCchhEEEcCC---CCEEEeeccCceecccCcc---cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999866   8899999999987643321   124457899999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||....   .......+......     ....+++.+.++|.+||+.||++||+++++++
T Consensus       236 ~g~~pf~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          236 VGKPPFETSC---LKETYLRIKKNEYS-----IPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HSSCTTCCSS---HHHHHHHHHHTCCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HCcCCCCCCC---HHHHHHHHhcCCCC-----CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999998743   23333333332222     22578899999999999999999999999976

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.4e-39  Score=261.27  Aligned_cols=204  Identities=20%  Similarity=0.262  Sum_probs=174.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++...+..++|||++ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        58 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  135 (284)
T 2vgo_A           58 EHQLRREIEIQSHLR-HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK-HGRFDEQRSATFMEELADALHYCHERKV  135 (284)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             HHHHHHHHHHHhcCC-CCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            457889999999998 999999999999999999999999 8899999985 4579999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||++.......     .....+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       136 ~H~dl~p~Nil~~~~---~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  207 (284)
T 2vgo_A          136 IHRDIKPENLLMGYK---GELKIADFGWSVHAPSLR-----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV  207 (284)
T ss_dssp             ECCCCSGGGEEECTT---CCEEECCCTTCEECSSSC-----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHH
T ss_pred             eecCCCHHHEEEcCC---CCEEEecccccccCcccc-----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHH
Confidence            999999999999766   889999999987654321     144578999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||....   .......+.....     ..+..+++.+.++|.+||+.||.+||+++++++
T Consensus       208 g~~pf~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          208 GMPPFDSPS---HTETHRRIVNVDL-----KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             SSCTTCCSS---HHHHHHHHHTTCC-----CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCCC---HhHHHHHHhcccc-----CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            999998743   2222222322221     223668999999999999999999999999986

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1e-39  Score=267.49  Aligned_cols=214  Identities=15%  Similarity=0.129  Sum_probs=165.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.++++++ ||||+++++++.++...++||||++++|.+++.. ...+++..+..++.|++.||.|||+.|++
T Consensus        77 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~i~~ql~~~l~~LH~~~iv  154 (329)
T 3gbz_A           77 PGTAIREVSLLKELQ-HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDK-NPDVSMRVIKSFLYQLINGVNFCHSRRCL  154 (329)
T ss_dssp             ---CHHHHHHGGGCC-CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             chhHHHHHHHHHHcC-CCCcceEEEEEecCCEEEEEEecCCCCHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence            457889999999997 9999999999999999999999998899999985 55799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccC--CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRE--NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYF  166 (257)
Q Consensus        90 H~dl~~~nili~~~~--~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l  166 (257)
                      |+||||+||+++.++  ..+.++|+|||++........   ......+++.|+|||++.+.. ++.++||||||+++|+|
T Consensus       155 H~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  231 (329)
T 3gbz_A          155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR---QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEM  231 (329)
T ss_dssp             CSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc---ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHH
Confidence            999999999996542  235699999999876543221   113456799999999998754 79999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCCh-------------------------hhhhcCCcHHHHHHHHHHhcCCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTP-------------------------EAICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      ++|..||....   ....+..+.........                         ......+++.+.++|.+||+.||+
T Consensus       232 l~g~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  308 (329)
T 3gbz_A          232 LMKTPLFPGDS---EIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPV  308 (329)
T ss_dssp             HHSSCSSCCSS---HHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGG
T ss_pred             HHCCCCcCCCC---HHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChh
Confidence            99999998743   33333333322111110                         011123788999999999999999


Q ss_pred             CCCChHHHHH
Q psy2769         222 EEPNYGKLRD  231 (257)
Q Consensus       222 ~Rp~~~~~~~  231 (257)
                      +|||++++++
T Consensus       309 ~R~t~~e~l~  318 (329)
T 3gbz_A          309 KRISAKNALE  318 (329)
T ss_dssp             GSCCHHHHHT
T ss_pred             hCCCHHHHhC
Confidence            9999998864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=2.9e-39  Score=267.02  Aligned_cols=214  Identities=19%  Similarity=0.204  Sum_probs=171.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--------CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--------GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ...+.+|+.+++.++ ||||+++++++..        .+..++||||++++|.+.+......+++..+..++.|++.||.
T Consensus        60 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~  138 (351)
T 3mi9_A           60 PITALREIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY  138 (351)
T ss_dssp             CHHHHHHHHHHHHCC-CTTBCCEEEEEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhcc-CCCcccHhheeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence            446789999999998 9999999999876        3468999999988999988866678999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-CCCccCCCCcccccChhHhcCC-CCCCcchHHHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLTGTARYASVNAHQWL-DQSPRDDLEAL  159 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~sl  159 (257)
                      +||+.|++|+||||+||+++.+   +.++|+|||++......... ........+++.|+|||++.+. .++.++|||||
T Consensus       139 ~LH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diwsl  215 (351)
T 3mi9_A          139 YIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGA  215 (351)
T ss_dssp             HHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHH
T ss_pred             HHHHCCeeCCCCCHHHEEEcCC---CCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHH
Confidence            9999999999999999999866   89999999999876533211 1122445789999999999764 57999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcC----------------------------CcHHHHHH
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEG----------------------------TPPEFAEF  211 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~l  211 (257)
                      |+++|+|++|..||.+...   ......+.......... ..+.                            .++.+.++
T Consensus       216 G~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  291 (351)
T 3mi9_A          216 GCIMAEMWTRSPIMQGNTE---QHQLALISQLCGSITPE-VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDL  291 (351)
T ss_dssp             HHHHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCTT-TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCh---HHHHHHHHHHhCCCChh-hccccccchhhcccccccccccCHHHHhhhccCChHHHHH
Confidence            9999999999999997433   33333333322222111 1111                            36789999


Q ss_pred             HHHHhcCCCCCCCChHHHHH
Q psy2769         212 LRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       212 i~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |.+||+.||++|||++++++
T Consensus       292 i~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          292 IDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhcCChhhCCCHHHHhC
Confidence            99999999999999999876

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.6e-39  Score=262.23  Aligned_cols=207  Identities=20%  Similarity=0.263  Sum_probs=175.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. ||||+++++++...+..+++||++ +++|.+++.. ...+++..+..++.|++.||.+||+.|
T Consensus        58 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~  135 (294)
T 2rku_A           58 QREKMSMEISIHRSLA-HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKR-RKALTEPEARYYLRQIVLGCQYLHRNR  135 (294)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3457888999999997 999999999999999999999999 8999998874 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.........   .....+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       136 i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~  209 (294)
T 2rku_A          136 VIHRDLKLGNLFLNED---LEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL  209 (294)
T ss_dssp             EECCCCCGGGEEECTT---CCEEECCCTTCEECCSTTCC---BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHH
T ss_pred             ccccCCChHhEEEcCC---CCEEEEeccCceecccCccc---cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999866   88999999998876433221   24457899999999999988999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||....   ..+....+.....     ..+..+++.+.+++.+||+.||++||+++++++
T Consensus       210 ~g~~p~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          210 VGKPPFETSC---LKETYLRIKKNEY-----SIPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HSSCTTCCSS---HHHHHHHHHTTCC-----CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hCCCCCCCCC---HHHHHHHHhhccC-----CCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            9999998743   2222333322221     223578899999999999999999999999987

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=4.1e-40  Score=262.35  Aligned_cols=211  Identities=13%  Similarity=0.164  Sum_probs=175.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC--CccEEEEecc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG--DYNILVMELL-GPSLEDLFQYCSK-RFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~--~~~~~v~e~~-~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      .+.+.+|+.++.++. ||||+++++++...  ...++||||+ +++|.+++..... .+++..+..++.|++.||.|||+
T Consensus        51 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  129 (271)
T 3kmu_A           51 SRDFNEECPRLRIFS-HPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT  129 (271)
T ss_dssp             HHHHHHHGGGGCCCS-CTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhcC-CCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            457889999999997 99999999999876  7889999999 8999999985432 58999999999999999999999


Q ss_pred             CC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCC---cchHHHHH
Q psy2769          86 KK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP---RDDLEALC  160 (257)
Q Consensus        86 ~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~---~~Dv~slg  160 (257)
                      .|  ++|+||||+||+++.+   +.++++||++......        ....+++.|+|||.+.+...+.   ++||||||
T Consensus       130 ~~~~i~H~dikp~Nil~~~~---~~~~l~~~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG  198 (271)
T 3kmu_A          130 LEPLIPRHALNSRSVMIDED---MTARISMADVKFSFQS--------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFA  198 (271)
T ss_dssp             SSSCCTTCCCSGGGEEECTT---SCEEEEGGGSCCTTSC--------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHH
T ss_pred             CCCceecCCCccceEEEcCC---cceeEEeccceeeecc--------cCccCCccccChhhhccCCCCCCCchhhHHHHH
Confidence            99  9999999999999866   7899998887644221        3456899999999998765544   79999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      +++|+|++|..||.....   ......+..   ....+..+..+|+.+.+++..||+.||++|||++++++.|+++.+
T Consensus       199 ~il~el~~g~~p~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          199 VLLWELVTREVPFADLSN---MEIGMKVAL---EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHHCSCTTTTSCH---HHHHHHHHH---SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCccccCh---HHHHHHHHh---cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            999999999999987532   222222222   222233446789999999999999999999999999999998753

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=9.9e-40  Score=282.80  Aligned_cols=210  Identities=23%  Similarity=0.253  Sum_probs=175.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ....+.+|+.++..+. ||||+++++++.+....|+||||+ |++|.+++... ...+++..+..++.|++.||.|||+.
T Consensus       227 ~~~~~~~E~~iL~~l~-hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~  305 (576)
T 2acx_A          227 GEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE  305 (576)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcC-CCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456789999999998 999999999999999999999999 99999999853 23599999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.++|+|||++.......    ......||+.|+|||++.+..++.++||||||+++|+|
T Consensus       306 gIvHrDLKPeNILld~~---g~vKL~DFGla~~~~~~~----~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeL  378 (576)
T 2acx_A          306 RIVYRDLKPENILLDDH---GHIRISDLGLAVHVPEGQ----TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM  378 (576)
T ss_dssp             TEECCCCCGGGEEECTT---SCEEECCCTTCEECCTTC----CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHH
T ss_pred             CEeccCCchheEEEeCC---CCeEEEecccceecccCc----cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHH
Confidence            99999999999999866   899999999998764332    11445799999999999998899999999999999999


Q ss_pred             HhCCCCCCCCCCccH-HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNE-ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      ++|..||........ ......+....     ...+..+|+.+.++|.+||..||++||     +++++++
T Consensus       379 ltG~~PF~~~~~~~~~~~i~~~i~~~~-----~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          379 IAGQSPFQQRKKKIKREEVERLVKEVP-----EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHSSCSSSCSSSCCCHHHHHHHHHHCC-----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HhCCCCCcccccchhHHHHHHHhhccc-----ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            999999987654322 22222222221     222367899999999999999999999     5566543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.5e-39  Score=259.53  Aligned_cols=212  Identities=20%  Similarity=0.198  Sum_probs=176.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee----------------CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS----------------GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLM   71 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----------------~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~   71 (257)
                      .+.+.+|+.++.++. ||||+++++++..                ....++||||+ +++|.+++... ...+++..+..
T Consensus        48 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  126 (284)
T 2a19_B           48 NEKAEREVKALAKLD-HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE  126 (284)
T ss_dssp             SGGGHHHHHHHHHCC-CTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHH
T ss_pred             cHHHHHHHHHHHhCC-CCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHH
Confidence            357899999999998 9999999998754                34589999999 88999999864 46799999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCC
Q psy2769          72 LADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS  151 (257)
Q Consensus        72 ~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  151 (257)
                      ++.|++.||.+||+.|++|+||+|+||+++.+   +.++|+|||++........    .....+++.|+|||.+.+..++
T Consensus       127 i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~  199 (284)
T 2a19_B          127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDT---KQVKIGDFGLVTSLKNDGK----RTRSKGTLRYMSPEQISSQDYG  199 (284)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEESSCCSC----CCCCCSCCTTSCHHHHHCSCCC
T ss_pred             HHHHHHHHHHHHHhCCeeeccCCHHHEEEcCC---CCEEECcchhheecccccc----ccccCCcccccChhhhccCCCc
Confidence            99999999999999999999999999999876   8999999999877654321    1445689999999999998899


Q ss_pred             CcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         152 PRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .++||||||+++|+|++|..|+...     ......+...       .....+|+.+.++|.+||+.||++||++.++++
T Consensus       200 ~~~Di~slG~il~~l~~~~~~~~~~-----~~~~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  267 (284)
T 2a19_B          200 KEVDLYALGLILAELLHVCDTAFET-----SKFFTDLRDG-------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILR  267 (284)
T ss_dssp             THHHHHHHHHHHHHHHSCCSSHHHH-----HHHHHHHHTT-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhhhHHHHHHHHHHHhcCCcchhH-----HHHHHHhhcc-------cccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999998887531     1111111111       122568899999999999999999999999999


Q ss_pred             HHHHHHHhcc
Q psy2769         232 SFRNLLENKE  241 (257)
Q Consensus       232 ~l~~~~~~~~  241 (257)
                      .|..+.+...
T Consensus       268 ~l~~~~~~~~  277 (284)
T 2a19_B          268 TLTVWKKSPE  277 (284)
T ss_dssp             HHHHHTC---
T ss_pred             HHHHHhhCCC
Confidence            9998877554

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=2.4e-39  Score=259.68  Aligned_cols=219  Identities=15%  Similarity=0.242  Sum_probs=179.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++......++|||++ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        52 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i  129 (283)
T 3bhy_A           52 REEIEREVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAE-KESLTEDEATQFLKQILDGVHYLHSKRI  129 (283)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCeeehhheecCCCeEEEEEeecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            567899999999998 999999999999999999999999 8999999984 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccC-CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRE-NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~-~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||+|+||+++.++ ....++|+|||.+........    .....+++.|+|||.+.+..++.++||||||+++|+|+
T Consensus       130 ~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  205 (283)
T 3bhy_A          130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL  205 (283)
T ss_dssp             ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             cCCCCChHHEEEecCCCCCCceEEEecccceeccCCCc----ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHH
Confidence            9999999999998652 123899999999876544321    13456899999999999989999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      +|..||....   .......+...... ........+|+.+.+++.+||..||++||++.++++  .++++.+
T Consensus       206 ~g~~p~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  274 (283)
T 3bhy_A          206 SGASPFLGET---KQETLTNISAVNYD-FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR  274 (283)
T ss_dssp             HSSCTTCCSS---HHHHHHHHHTTCCC-CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred             HCCCCCCCcc---hHHHHHHhHhcccC-CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence            9999998743   33333333322222 234445788999999999999999999999999987  5555443

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.6e-39  Score=267.86  Aligned_cols=207  Identities=19%  Similarity=0.267  Sum_probs=171.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+++.+|+.+++.++ ||||+++++++....      ..|+|||+++++|.+++..  ..+++..+..++.|++.||.||
T Consensus        68 ~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~L  144 (367)
T 1cm8_A           68 AKRAYRELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYI  144 (367)
T ss_dssp             HHHHHHHHHHHHHCC-BTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-CcCCCCceeeEecCCccccCceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Confidence            457889999999998 999999999987653      4599999999999999984  6799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      |+.|++||||||+||+++.+   +.+||+|||++......      .....+|+.|+|||++.+ ..++.++||||+||+
T Consensus       145 H~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  215 (367)
T 1cm8_A          145 HAAGIIHRDLKPGNLAVNED---CELKILDFGLARQADSE------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI  215 (367)
T ss_dssp             HHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCSS------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred             HHCCccccCcCHHHEEEcCC---CCEEEEeeecccccccc------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHH
Confidence            99999999999999999876   89999999999875432      145678999999999987 678999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh--------------------------CChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT--------------------------MTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +++|++|..||.+....   ..+..+......                          ..........++.+.+++.+||
T Consensus       216 l~ell~g~~pf~~~~~~---~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL  292 (367)
T 1cm8_A          216 MAEMITGKTLFKGSDHL---DQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKML  292 (367)
T ss_dssp             HHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS
T ss_pred             HHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHc
Confidence            99999999999874332   222222221111                          1112233567899999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++|||++++++
T Consensus       293 ~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          293 VLDAEQRVTAGEALA  307 (367)
T ss_dssp             CSSTTTSCCHHHHHH
T ss_pred             cCChhHCCCHHHHhc
Confidence            999999999999887

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.2e-39  Score=264.08  Aligned_cols=211  Identities=20%  Similarity=0.195  Sum_probs=175.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++..+. ||||+++++++......++|||++ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        50 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  127 (304)
T 2jam_A           50 DSSLENEIAVLKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTEKDASLVIQQVLSAVKYLHENGI  127 (304)
T ss_dssp             --HHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHhCC-CCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            456889999999998 999999999999999999999999 8999999875 4579999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||++..++..+.++|+|||++......     ......+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       128 ~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  202 (304)
T 2jam_A          128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC  202 (304)
T ss_dssp             CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHH
Confidence            99999999999954334488999999998643221     1133458999999999999889999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||....   .......+....... .......+|+.+.++|.+||..||++||+++++++
T Consensus       203 g~~pf~~~~---~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          203 GYPPFYEET---ESKLFEKIKEGYYEF-ESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             SSCTTTTSC---HHHHHHHHHHCCCCC-CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCCCCCCC---HHHHHHHHHcCCCCC-CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999998743   333334444333222 22334678999999999999999999999999876

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.2e-39  Score=270.51  Aligned_cols=221  Identities=14%  Similarity=0.153  Sum_probs=177.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-----CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+.+.+|+.++.+++ ||||+++++++...     ...++|||+++++|.+++.  ...+++..+..++.|++.||.|||
T Consensus        69 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~~L~~~l~--~~~~~~~~~~~i~~qi~~aL~~LH  145 (364)
T 3qyz_A           69 CQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK--TQHLSNDHICYFLYQILRGLKYIH  145 (364)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTTCCCEEEEEECCSEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCCccceeEEecCCccccceEEEEEcccCcCHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHH
Confidence            367889999999998 99999999998654     3689999999889999998  457999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTL  163 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l  163 (257)
                      +.|++|+||||+||+++.+   +.++|+|||++.................+++.|+|||++.+ ..++.++||||||+++
T Consensus       146 ~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  222 (364)
T 3qyz_A          146 SANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL  222 (364)
T ss_dssp             HTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHH
T ss_pred             HCCeecCCCChHhEEECCC---CCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHH
Confidence            9999999999999999766   88999999999876543322222245679999999998754 4579999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHH-----------------------HhhCChhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEM-----------------------KLTMTPEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      |+|++|..||.+....+....+......                       ..........+.+++.+.++|.+||+.||
T Consensus       223 ~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  302 (364)
T 3qyz_A          223 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNP  302 (364)
T ss_dssp             HHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSST
T ss_pred             HHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCCh
Confidence            9999999999886555443333221100                       00112233446788999999999999999


Q ss_pred             CCCCChHHHHH--HHHHH
Q psy2769         221 SEEPNYGKLRD--SFRNL  236 (257)
Q Consensus       221 ~~Rp~~~~~~~--~l~~~  236 (257)
                      ++|||++++++  .+++.
T Consensus       303 ~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          303 HKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             TTSCCHHHHHTSGGGTTT
T ss_pred             hhCCCHHHHhcCcchhhc
Confidence            99999999986  44444

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.7e-39  Score=263.10  Aligned_cols=208  Identities=20%  Similarity=0.293  Sum_probs=176.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++..+. ||||+++++++......++||||+ +++|.+++.  ...+++..+..++.|++.||.+||+.
T Consensus        62 ~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~  138 (303)
T 3a7i_A           62 DEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSE  138 (303)
T ss_dssp             TTHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34577899999999997 999999999999999999999999 889999987  56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+   +.++|+|||.+........   ......+++.|+|||.+.+..++.++||||||+++|+|
T Consensus       139 ~i~H~dl~p~Nil~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  212 (303)
T 3a7i_A          139 KKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL  212 (303)
T ss_dssp             TEECCCCSGGGEEECTT---SCEEECCCTTCEECBTTBC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CCccCCCChheEEECCC---CCEEEeecccceecCcccc---ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence            99999999999999766   8899999999977644321   11455789999999999998899999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.....   ......+..    ...+.....+|..+.+++.+||+.||++||+++++++
T Consensus       213 ~~g~~p~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          213 ARGEPPHSELHP---MKVLFLIPK----NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             HHSSCTTTTSCH---HHHHHHHHH----SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccCCCCCCCcCH---HHHHHHhhc----CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            999999987432   222222222    2223334678999999999999999999999999976

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=9e-40  Score=268.32  Aligned_cols=200  Identities=18%  Similarity=0.160  Sum_probs=170.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GP-SLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~-~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.++.++. ||||+++++++...+..++|||++ ++ +|.+++.. ...+++..+..++.|++.||.|||+.
T Consensus        72 ~~~~~~~E~~~l~~l~-h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~  149 (335)
T 3dls_A           72 KLGKVTLEIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR-HPRLDEPLASYIFRQLVSAVGYLRLK  149 (335)
T ss_dssp             TTEEEEHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHT-CCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4567899999999997 999999999999999999999998 55 99999884 55799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~  165 (257)
                      |++|+||||+||+++.+   +.++|+|||++........    .....|++.|+|||.+.+..+ +.++||||||+++|+
T Consensus       150 ~ivH~Dlkp~NIll~~~---~~~kL~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~e  222 (335)
T 3dls_A          150 DIIHRDIKDENIVIAED---FTIKLIDFGSAAYLERGKL----FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYT  222 (335)
T ss_dssp             TEECSCCSGGGEEECTT---SCEEECCCTTCEECCTTCC----BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred             CeEEeccCHHHEEEcCC---CcEEEeecccceECCCCCc----eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHH
Confidence            99999999999999866   8999999999987644321    134568999999999998876 789999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||.......              ......+..+++.+.++|.+||+.||++||+++++++
T Consensus       223 l~~g~~pf~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          223 LVFEENPFCELEETV--------------EAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             HHHSSCSCSSGGGGT--------------TTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCchhhHHHHH--------------hhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999998642210              0111112568999999999999999999999999876

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=4.4e-39  Score=259.96  Aligned_cols=210  Identities=17%  Similarity=0.239  Sum_probs=175.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++.+||||+++++++......++|||++ +++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        67 ~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  145 (298)
T 1phk_A           67 REATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLNI  145 (298)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            4567899999999988999999999999999999999999 8999999985 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc------CCCCCCcchHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ------WLDQSPRDDLEALCYT  162 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~------~~~~~~~~Dv~slg~~  162 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.......    ......+++.|+|||.+.      ...++.++||||||++
T Consensus       146 ~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~  218 (298)
T 1phk_A          146 VHRDLKPENILLDDD---MNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVI  218 (298)
T ss_dssp             ECSCCSGGGEEECTT---CCEEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHH
T ss_pred             ccCCCCcceEEEcCC---CcEEEecccchhhcCCCc----ccccccCCccccCHHHhccccccccccCCcccccHhHHHH
Confidence            999999999999766   889999999987764432    124457899999999985      4457889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|+|++|..||....   .......+......... .....+|+.+.+++.+||+.||++||+++++++
T Consensus       219 l~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          219 MYTLLAGSPPFWHRK---QMLMLRMIMSGNYQFGS-PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHHHHSSCSSCCSS---HHHHHHHHHHTCCCCCT-TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHCCCCCcCcc---HHHHHHHHhcCCcccCc-ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            999999999998743   33333334333333222 223568999999999999999999999998865

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=7.4e-40  Score=262.04  Aligned_cols=207  Identities=20%  Similarity=0.263  Sum_probs=153.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+++.+|+.++.++. ||||+++++++.+....++|||++ +++|.+++......+++..+..++.|++.||.+||+.|+
T Consensus        55 ~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  133 (278)
T 3cok_A           55 VQRVQNEVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI  133 (278)
T ss_dssp             HHHHHHHHHHHTTBC-CTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            467889999999998 999999999999999999999999 899999998655779999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +|+||+|+||+++.+   +.++|+|||.+.........   .....+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       134 ~H~dl~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  207 (278)
T 3cok_A          134 LHRDLTLSNLLLTRN---MNIKIADFGLATQLKMPHEK---HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI  207 (278)
T ss_dssp             ECSSCCGGGEEECTT---CCEEECCCTTCEECC-------------------------------CTHHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCC---CCEEEEeecceeeccCCCCc---ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999766   88999999998765433211   134568999999999998888999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||..........   .+     .......+..++..+.++|.+||+.||++||+++++++
T Consensus       208 g~~p~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          208 GRPPFDTDTVKNTLN---KV-----VLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             SSCSSCCCSCC--------C-----CSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCCCCCChhHHHHHH---HH-----hhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            999998754332211   11     11111223568899999999999999999999999875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=9.1e-40  Score=289.24  Aligned_cols=218  Identities=19%  Similarity=0.301  Sum_probs=179.8

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++. ||||+++++++.. +..++||||+ +++|.+++......+++..+..++.|++.||.|||+.|+
T Consensus       435 ~~~~~~E~~~l~~l~-HpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  512 (656)
T 2j0j_A          435 REKFLQEALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF  512 (656)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEec-CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            367899999999998 9999999999854 5689999999 899999998666679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++|+|||++.........  ......+++.|+|||.+.+..++.++||||||+++|+|++
T Consensus       513 vHrDikp~NILl~~~---~~vkL~DFG~a~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  587 (656)
T 2j0j_A          513 VHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYY--KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM  587 (656)
T ss_dssp             CCSCCSGGGEEEEET---TEEEECCCCCCCSCCC------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccccchHhEEEeCC---CCEEEEecCCCeecCCCcce--eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHH
Confidence            999999999999877   89999999998765433211  1133456789999999998889999999999999999997


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                       |..||.+...   ...+..+....    ....+..+|+.+.+++.+||+.||++||++.++++.|++++++..
T Consensus       588 ~g~~Pf~~~~~---~~~~~~i~~~~----~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~k  654 (656)
T 2j0j_A          588 HGVKPFQGVKN---NDVIGRIENGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  654 (656)
T ss_dssp             TSCCTTTTCCH---HHHHHHHHHTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCH---HHHHHHHHcCC----CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence             9999987533   33333333322    122336789999999999999999999999999999999987653

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=4.1e-39  Score=274.88  Aligned_cols=209  Identities=18%  Similarity=0.204  Sum_probs=162.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..+++.+|+.+++.+. ||||+++++++....      ..|+||||++++|.+.+.   ..+++..+..++.|++.||.|
T Consensus       104 ~~~~~~~E~~~l~~l~-hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~---~~l~~~~~~~~~~qil~aL~~  179 (464)
T 3ttj_A          104 HAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH  179 (464)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT---SCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHh---hcCCHHHHHHHHHHHHHHHHH
Confidence            3557889999999997 999999999986543      569999999777877775   459999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ||+.||+||||||+||+++.+   +.+||+|||++.......    ......+|+.|+|||++.+..++.++||||+||+
T Consensus       180 lH~~~iiHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  252 (464)
T 3ttj_A          180 LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI  252 (464)
T ss_dssp             HHHTTCCCCCCCGGGEEECTT---SCEEECCCCCC-----CC----CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             HHHCCcccCCCChHhEEEeCC---CCEEEEEEEeeeecCCCc----ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHH
Confidence            999999999999999999876   899999999997654321    1245679999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCCh-------------------------hhhhc------------CCc
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP-------------------------EAICE------------GTP  205 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~------------~~~  205 (257)
                      +|+|++|+.||.+...   ...+..+........+                         +...+            ..+
T Consensus       253 l~ell~g~~pF~g~~~---~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  329 (464)
T 3ttj_A          253 MGEMVRHKILFPGRDY---IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA  329 (464)
T ss_dssp             HHHHHHSSCSSCCSSH---HHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCH---HHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccC
Confidence            9999999999987433   2333333222111000                         00000            015


Q ss_pred             HHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         206 PEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       206 ~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.+.++|.+||..||++|||++++++
T Consensus       330 ~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          330 SQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            67999999999999999999999876

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-39  Score=268.98  Aligned_cols=212  Identities=18%  Similarity=0.241  Sum_probs=173.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++..+.+||||+++++++......++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|
T Consensus       101 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~  179 (355)
T 1vzo_A          101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIVLALEHLHKLG  179 (355)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34668889999999977999999999999999999999999 8999999985 457999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC--CCCCcchHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL--DQSPRDDLEALCYTLVY  165 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slg~~l~~  165 (257)
                      ++|+||||+||+++.+   +.++|+|||++........  .......||+.|+|||++.+.  .++.++||||||+++|+
T Consensus       180 ivH~Dlkp~NIll~~~---~~~kl~DfG~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~e  254 (355)
T 1vzo_A          180 IIYRDIKLENILLDSN---GHVVLTDFGLSKEFVADET--ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE  254 (355)
T ss_dssp             CCCCCCCGGGEEECTT---SCEEESCSSEEEECCGGGG--GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHH
T ss_pred             cccCCCCHHHEEECCC---CcEEEeeCCCCeecccCCC--CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHH
Confidence            9999999999999866   8999999999876543211  111345789999999999863  46889999999999999


Q ss_pred             HHhCCCCCCCCCCccH-HHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNE-ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      |++|..||........ ......+...     .+..+..+++.+.++|.+||..||++||     +++++++
T Consensus       255 ll~g~~pf~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~  321 (355)
T 1vzo_A          255 LLTGASPFTVDGEKNSQAEISRRILKS-----EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  321 (355)
T ss_dssp             HHHSSCTTSCTTSCCCHHHHHHHHHHC-----CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHCCCCCccCCccchHHHHHHHHhcc-----CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence            9999999986543332 2222222221     1223367889999999999999999999     7777764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-39  Score=268.45  Aligned_cols=218  Identities=24%  Similarity=0.298  Sum_probs=171.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh--------------------------
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC--------------------------   60 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~--------------------------   60 (257)
                      ...+.+.+|+.++++++ ||||+++++++.+....++||||+ +++|.+++...                          
T Consensus        70 ~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T 3hko_A           70 KDVERIKTEVRLMKKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE  148 (345)
T ss_dssp             CHHHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-CCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccc
Confidence            34567899999999998 999999999999999999999999 99999988421                          


Q ss_pred             -------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-C
Q psy2769          61 -------------SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-P  126 (257)
Q Consensus        61 -------------~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-~  126 (257)
                                   ...+++..+..++.|++.||.|||+.|++|+||||+||+++.+ ....++|+|||++..+..... .
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~  227 (345)
T 3hko_A          149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGE  227 (345)
T ss_dssp             HHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC-
T ss_pred             ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccc
Confidence                         1123567889999999999999999999999999999999765 224899999999986543221 1


Q ss_pred             CCCccCCCCcccccChhHhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCC
Q psy2769         127 RIRTRGLTGTARYASVNAHQW--LDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT  204 (257)
Q Consensus       127 ~~~~~~~~~~~~~~aPE~~~~--~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (257)
                      ........+++.|+|||.+.+  ..++.++||||||+++|+|++|..||....   .......+......... .....+
T Consensus       228 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---~~~~~~~~~~~~~~~~~-~~~~~~  303 (345)
T 3hko_A          228 YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN---DADTISQVLNKKLCFEN-PNYNVL  303 (345)
T ss_dssp             -------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHCCCCTTS-GGGGGS
T ss_pred             cccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---hHHHHHHHHhcccccCC-cccccC
Confidence            111245679999999999975  567899999999999999999999998753   33333444433333222 223568


Q ss_pred             cHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         205 PPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       205 ~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++.+.++|.+||+.||.+||++.++++
T Consensus       304 ~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          304 SPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            999999999999999999999999876

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.6e-40  Score=288.38  Aligned_cols=219  Identities=19%  Similarity=0.263  Sum_probs=181.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+.+.+|+.++++|+ ||||+++++++.. ...++||||+ +++|.+++... ...+++..+..++.|++.||.|||++
T Consensus       305 ~~~~~~~E~~~l~~l~-hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  382 (535)
T 2h8h_A          305 SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM  382 (535)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHhCC-CCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4567999999999998 9999999999876 6799999999 89999999753 45699999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++||||||+||+++.+   +.+||+|||++.......  ........++..|+|||.+.+..++.++||||||+++|+|
T Consensus       383 ~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el  457 (535)
T 2h8h_A          383 NYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNE--YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL  457 (535)
T ss_dssp             TCCCSCCSGGGEEECGG---GCEEECCTTSTTTCCCHH--HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CeeCCCCCHhhEEEcCC---CcEEEcccccceecCCCc--eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence            99999999999999876   899999999987543211  0011234467889999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      ++ |..||.+...   .+.+..+...    ........+|+.+.++|.+||+.||++||+++++++.|++++....
T Consensus       458 ~t~g~~P~~~~~~---~~~~~~i~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~  526 (535)
T 2h8h_A          458 TTKGRVPYPGMVN---REVLDQVERG----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  526 (535)
T ss_dssp             TTTTCCSSTTCCH---HHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCS
T ss_pred             HhCCCCCCCCCCH---HHHHHHHHcC----CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccC
Confidence            99 9999987533   2333333222    1112236789999999999999999999999999999999887544

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=4.4e-39  Score=258.46  Aligned_cols=206  Identities=20%  Similarity=0.145  Sum_probs=169.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ....+.+|+..+..+.+||||+++++++...+..++||||+ +++|.+++...   ...+++..+..++.|++.||.|||
T Consensus        53 ~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH  132 (289)
T 1x8b_A           53 DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH  132 (289)
T ss_dssp             HHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            34578899999999956999999999999999999999999 88999999864   267999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccC----------------CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC
Q psy2769          85 RKKIVHRDIKPDNFLMGVRE----------------NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL  148 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~----------------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  148 (257)
                      +.|++|+||||+||+++.++                ....++|+|||.+......       ....+++.|+|||.+.+.
T Consensus       133 ~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~~y~aPE~~~~~  205 (289)
T 1x8b_A          133 SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP-------QVEEGDSRFLANEVLQEN  205 (289)
T ss_dssp             HTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS-------CCCCCCGGGCCHHHHTTC
T ss_pred             hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc-------cccCCCccccChhHhcCC
Confidence            99999999999999998542                3357999999998876442       334589999999999876


Q ss_pred             -CCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH
Q psy2769         149 -DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG  227 (257)
Q Consensus       149 -~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~  227 (257)
                       .++.++||||||+++|+|++|..|+...   ...   ..+...    ..+..+..+|+.+.+++.+||+.||++||++.
T Consensus       206 ~~~~~~~Di~slG~il~~l~~~~~~~~~~---~~~---~~~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  275 (289)
T 1x8b_A          206 YTHLPKADIFALALTVVCAAGAEPLPRNG---DQW---HEIRQG----RLPRIPQVLSQEFTELLKVMIHPDPERRPSAM  275 (289)
T ss_dssp             CTTHHHHHHHHHHHHHHHHTTCCCCCSSS---HHH---HHHHTT----CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCchhhHHHHHHHHHHHhcCCCCCcch---hHH---HHHHcC----CCCCCCcccCHHHHHHHHHHhCCCcccCCCHH
Confidence             4567999999999999999998877542   211   122221    22333467899999999999999999999999


Q ss_pred             HHHH
Q psy2769         228 KLRD  231 (257)
Q Consensus       228 ~~~~  231 (257)
                      ++++
T Consensus       276 ~ll~  279 (289)
T 1x8b_A          276 ALVK  279 (289)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9865

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.7e-40  Score=275.38  Aligned_cols=229  Identities=15%  Similarity=0.099  Sum_probs=166.1

Q ss_pred             ccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEeccCCCHHHHHHHhc--------CCCCHHHHHH
Q psy2769           2 KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELLGPSLEDLFQYCS--------KRFSLKTVLM   71 (257)
Q Consensus         2 k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~~~~L~~~~~~~~--------~~~~~~~~~~   71 (257)
                      |+.........+.+|+.++.++. ||||+++++++..  ....++||||++++|.+++....        ..+++..+..
T Consensus        54 K~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~  132 (405)
T 3rgf_A           54 KQIEGTGISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKS  132 (405)
T ss_dssp             EECSSSSCCHHHHHHHHHHHHCC-CTTBCCCCEEEEETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHH
T ss_pred             EEECCCCCCHHHHHHHHHHHhcC-CCCeeeEeeEEecCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHH
Confidence            44444445567899999999998 9999999999954  66899999999889999887431        2499999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCCCCCceEeecc-CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-C
Q psy2769          72 LADQMISRLEHVHRKKIVHRDIKPDNFLMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-D  149 (257)
Q Consensus        72 ~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~-~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~  149 (257)
                      ++.|++.||.|||+.||+||||||+||++..+ ...+.++|+|||++.................+|+.|+|||++.+. .
T Consensus       133 i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  212 (405)
T 3rgf_A          133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  212 (405)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCS
T ss_pred             HHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCc
Confidence            99999999999999999999999999999543 234899999999998765432222222456789999999999875 4


Q ss_pred             CCCcchHHHHHHHHHHHHhCCCCCCCCCCcc------HHHHHHHHHHHHhhCCh---h----------------------
Q psy2769         150 QSPRDDLEALCYTLVYFLRGKLPWQSIKSDN------EETRMQRVTEMKLTMTP---E----------------------  198 (257)
Q Consensus       150 ~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~---~----------------------  198 (257)
                      ++.++|||||||++|+|++|..||.......      ....+..+.........   +                      
T Consensus       213 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (405)
T 3rgf_A          213 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN  292 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTT
T ss_pred             ccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCc
Confidence            8999999999999999999999997643311      11222222221110000   0                      


Q ss_pred             --------hhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         199 --------AICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       199 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                              ......++.+.+||.+||..||.+|||++++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          293 CSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             CCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             chhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                    000122678999999999999999999999876

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=6e-39  Score=258.00  Aligned_cols=213  Identities=23%  Similarity=0.291  Sum_probs=177.0

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++++. ||||+++++++......++|+|++ +++|.+.+.. ...+++..+..++.|++.||.+||+.
T Consensus        63 ~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~  140 (287)
T 2wei_A           63 KDTSTILREVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKH  140 (287)
T ss_dssp             SCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcc-CCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567899999999997 999999999999999999999999 9999998875 45799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++|+||+|+||+++.+...+.++|+|||++.......    ......+++.|+|||.+.+. ++.++||||||+++|+|
T Consensus       141 ~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l  215 (287)
T 2wei_A          141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYIL  215 (287)
T ss_dssp             TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHH
T ss_pred             CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC----ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHH
Confidence            99999999999999876445689999999987654322    11334588999999998764 78999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||....   .......+......... .....+|+.+.++|.+||+.||++||+++++++
T Consensus       216 ~~g~~p~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          216 LSGTPPFYGKN---EYDILKRVETGKYAFDL-PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHSSCSSCCSS---HHHHHHHHHHCCCCCCS-GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCCCCCCCCC---HHHHHHHHHcCCCCCCc-hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            99999998743   33333444443333222 223578999999999999999999999999987

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4e-39  Score=275.12  Aligned_cols=217  Identities=16%  Similarity=0.150  Sum_probs=164.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-----CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-----GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+++.+|+.++..+. ||||+++++++..     ....|+|||+++++|.+++.. ...+++..+..++.|++.||.|||
T Consensus        96 ~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH  173 (458)
T 3rp9_A           96 CKRILREIAILNRLN-HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT-PVYLTELHIKTLLYNLLVGVKYVH  173 (458)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-CCCCCceEEEEecCCcccCceEEEEEeccccchhhhccc-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence            457889999999997 9999999999843     356899999999999999983 567999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC------------------------CCccCCCCccccc
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR------------------------IRTRGLTGTARYA  140 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~  140 (257)
                      +.||+||||||+||+++.+   +.+||+|||++..........                        .......||+.|+
T Consensus       174 ~~~iiHrDlKp~NILl~~~---~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  250 (458)
T 3rp9_A          174 SAGILHRDLKPANCLVNQD---CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYR  250 (458)
T ss_dssp             HTTCBCCCCCGGGEEECTT---CCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTC
T ss_pred             hCCcCCCCCChhhEEECCC---CCEeecccccchhccCccccccccccCccccccccccccccccccccccCCccccccc
Confidence            9999999999999999876   899999999997654321110                        1123457899999


Q ss_pred             ChhHh-cCCCCCCcchHHHHHHHHHHHHh-----------CCCCCCCCCCc-----------------cHHHHHHHHHHH
Q psy2769         141 SVNAH-QWLDQSPRDDLEALCYTLVYFLR-----------GKLPWQSIKSD-----------------NEETRMQRVTEM  191 (257)
Q Consensus       141 aPE~~-~~~~~~~~~Dv~slg~~l~~l~~-----------g~~p~~~~~~~-----------------~~~~~~~~~~~~  191 (257)
                      |||++ .+..++.++|||||||++|||++           |.++|.+....                 .....+..+...
T Consensus       251 aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~  330 (458)
T 3rp9_A          251 APELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNI  330 (458)
T ss_dssp             CHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHH
T ss_pred             ChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHH
Confidence            99986 45668999999999999999998           66666553210                 011111222111


Q ss_pred             Hhh--------------------------CChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         192 KLT--------------------------MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       192 ~~~--------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ...                          .......+..++.+.+||++||..||++|||++++++
T Consensus       331 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          331 LGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             HCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            100                          0112223567899999999999999999999999887

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=3.5e-40  Score=268.89  Aligned_cols=233  Identities=19%  Similarity=0.220  Sum_probs=174.6

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++.+++ ||||+++++++......+++||++ +++|.+++......+++..+..++.|++.||.+||+.
T Consensus        71 ~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~  149 (319)
T 2y4i_B           71 DQLKAFKREVMAYRQTR-HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK  149 (319)
T ss_dssp             CCCCCCCTTGGGGTTCC-CTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34567899999999998 999999999999999999999999 8999999986555799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCC--CCCCCccCCCCcccccChhHhcC---------CCCCCcch
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNC--PPRIRTRGLTGTARYASVNAHQW---------LDQSPRDD  155 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~~~aPE~~~~---------~~~~~~~D  155 (257)
                      |++|+||+|+||+++ +   +.++|+|||++.......  ..........+++.|+|||.+.+         ..++.++|
T Consensus       150 ~i~H~dlkp~NIl~~-~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~D  225 (319)
T 2y4i_B          150 GILHKDLKSKNVFYD-N---GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSD  225 (319)
T ss_dssp             TCCCCCCCSTTEEEC------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHH
T ss_pred             CccccCCChhhEEEe-C---CCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhh
Confidence            999999999999996 3   689999999876543221  11111234568999999999975         34688999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         156 LEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       156 v~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      |||||+++|+|++|..||....   .......+....   .+......+|+.+.+++.+||+.||++||++.++++.|++
T Consensus       226 i~slG~il~el~~g~~p~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~  299 (319)
T 2y4i_B          226 VFALGTIWYELHAREWPFKTQP---AEAIIWQMGTGM---KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK  299 (319)
T ss_dssp             HHHHHHHHHHHHHSSCSSSSCC---HHHHHHHHHTTC---CCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC---HHHHHHHhccCC---CCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            9999999999999999998743   222222222221   1111124688899999999999999999999999999999


Q ss_pred             HHHhccccCCCCCcccc
Q psy2769         236 LLENKERCEFDLRYDWT  252 (257)
Q Consensus       236 ~~~~~~~~~~~~~~~~~  252 (257)
                      +.+...+ .......|.
T Consensus       300 l~~~~~~-~~~~~~~~~  315 (319)
T 2y4i_B          300 LPKRNRR-LSHPGHFWK  315 (319)
T ss_dssp             C----------------
T ss_pred             HHHhhcc-CCCCccccc
Confidence            9887763 333445553

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=8.1e-39  Score=259.25  Aligned_cols=210  Identities=20%  Similarity=0.246  Sum_probs=171.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeee--eeCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYG--TSGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~--~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+.+|+.++..++ ||||+++++++  ......++||||+.++|.+++... ...+++..+..++.|++.||.+||+
T Consensus        49 ~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~  127 (305)
T 2wtk_C           49 GEANVKKEIQLLRRLR-HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS  127 (305)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEEECC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcC-CCCeeEEEEEEEcCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH
Confidence            4567899999999998 99999999988  445678999999966688888754 5679999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC--CCcchHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ--SPRDDLEALCYTL  163 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~--~~~~Dv~slg~~l  163 (257)
                      .|++|+||+|+||+++.+   +.++|+|||.+.......... ......+++.|+|||.+.+...  +.++||||||+++
T Consensus       128 ~~i~H~dlkp~NIl~~~~---~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  203 (305)
T 2wtk_C          128 QGIVHKDIKPGNLLLTTG---GTLKISALGVAEALHPFAADD-TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL  203 (305)
T ss_dssp             TTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCSSC-EECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHH
T ss_pred             CCeeecCCCcccEEEcCC---CcEEeeccccccccCcccccc-ccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHH
Confidence            999999999999999866   899999999998765432221 2245578999999999987544  6799999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||...   +.......+......     ....+++.+.+++.+||+.||++||+++++++
T Consensus       204 ~~l~~g~~p~~~~---~~~~~~~~i~~~~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          204 YNITTGLYPFEGD---NIYKLFENIGKGSYA-----IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             HHHHHSSCSCCCS---SHHHHHHHHHHCCCC-----CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHhCCCCCCCc---hHHHHHHHHhcCCCC-----CCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            9999999999873   333333444333222     23678999999999999999999999999986

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2.8e-39  Score=264.72  Aligned_cols=211  Identities=18%  Similarity=0.201  Sum_probs=166.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-----------------------------------------------
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-----------------------------------------------   40 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-----------------------------------------------   40 (257)
                      ...+.+.+|+.++++++ ||||+++++++....                                               
T Consensus        46 ~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (332)
T 3qd2_B           46 LAREKVMREVKALAKLE-HPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV  124 (332)
T ss_dssp             THHHHHHHHHHHHTSCC-CTTBCCEEEEEEECCSCHHHHHHHC-------------------------------------
T ss_pred             hHHHHHHHHHHHHHhCC-CCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCccccc
Confidence            34567999999999998 999999999875432                                               


Q ss_pred             ----------ccEEEEecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCC
Q psy2769          41 ----------YNILVMELL-GPSLEDLFQYC--SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFN  107 (257)
Q Consensus        41 ----------~~~~v~e~~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~  107 (257)
                                ..+++|||+ +++|.+++...  ....+...+..++.|++.||.|||+.|++|+||||+||+++.+   +
T Consensus       125 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---~  201 (332)
T 3qd2_B          125 GQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD---D  201 (332)
T ss_dssp             -------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT---C
T ss_pred             ccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC---C
Confidence                      379999999 99999999853  2235666789999999999999999999999999999999866   8


Q ss_pred             eEEEEeCCcceecCCCCCCC---------CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCC
Q psy2769         108 TVYLVDFGLAVDFCPNCPPR---------IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKS  178 (257)
Q Consensus       108 ~~~l~df~~~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~  178 (257)
                      .++|+|||++..........         .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+..   
T Consensus       202 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~---  278 (332)
T 3qd2_B          202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME---  278 (332)
T ss_dssp             CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH---
T ss_pred             CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH---
Confidence            99999999998765542111         112345799999999999999999999999999999999998665432   


Q ss_pred             ccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         179 DNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                        .....    ........+......++.+.++|.+||+.||++||+++++++
T Consensus       279 --~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          279 --RVRII----TDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             --HHHHH----HHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             --HHHHH----HHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence              11111    112222333334556778999999999999999999999875

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.9e-39  Score=272.48  Aligned_cols=217  Identities=14%  Similarity=0.157  Sum_probs=165.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-----CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+++.+|+.+++.+. ||||+++++++...     ...|+|||+++++|.+++.. ...+++..+..++.|++.||.|||
T Consensus        69 ~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qil~aL~~LH  146 (432)
T 3n9x_A           69 CKRILREITILNRLK-SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT-PIFLTEEHIKTILYNLLLGENFIH  146 (432)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEECCCSCTTTCCCEEEEEECCSEEHHHHHHS-SCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC-CCCcceEEEEEecCCCCcCCeEEEEEecCCcCHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            457889999999998 99999999998765     56899999998899999984 567999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-------------------CCccCCCCcccccChhHh
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-------------------IRTRGLTGTARYASVNAH  145 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~aPE~~  145 (257)
                      +.|++||||||+||+++.+   +.+||+|||++..........                   .......+|+.|+|||++
T Consensus       147 ~~givHrDlkp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~  223 (432)
T 3n9x_A          147 ESGIIHRDLKPANCLLNQD---CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI  223 (432)
T ss_dssp             HTTEECCCCCGGGEEECTT---CCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHH
T ss_pred             HCCCCCCCCCHHHeEECCC---CCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHH
Confidence            9999999999999999876   899999999998765432110                   112456889999999986


Q ss_pred             -cCCCCCCcchHHHHHHHHHHHHhCCCC-----------CCCCCCc--------------cHHHHHHHHHHHHh------
Q psy2769         146 -QWLDQSPRDDLEALCYTLVYFLRGKLP-----------WQSIKSD--------------NEETRMQRVTEMKL------  193 (257)
Q Consensus       146 -~~~~~~~~~Dv~slg~~l~~l~~g~~p-----------~~~~~~~--------------~~~~~~~~~~~~~~------  193 (257)
                       .+..++.++||||+||++|+|++|..|           |.+....              .....+..+.....      
T Consensus       224 ~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~  303 (432)
T 3n9x_A          224 LLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDD  303 (432)
T ss_dssp             TTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHH
T ss_pred             hcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHH
Confidence             555689999999999999999985444           3332110              01111111111100      


Q ss_pred             --------------------hCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         194 --------------------TMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       194 --------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                                          +.......+.+++.+.++|++||..||++|||++++++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          304 LKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                                01112233568999999999999999999999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=8.7e-39  Score=262.12  Aligned_cols=211  Identities=17%  Similarity=0.180  Sum_probs=166.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++.+. ||||+++++++......++||||+ +++|.++.. ....+++..+..++.|++.||.+||+.|+
T Consensus        68 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  145 (331)
T 4aaa_A           68 KKIAMREIKLLKQLR-HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLEL-FPNGLDYQVVQKYLFQIINGIGFCHSHNI  145 (331)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-STTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhhCC-CCCEeeEEEEeecCCEEEEEEecCCcchHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            345778999999998 999999999999999999999999 666666554 46679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~  167 (257)
                      +|+||||+||+++.+   +.++|+|||++.........   .....+++.|+|||.+.+. .++.++||||||+++|+|+
T Consensus       146 vH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~  219 (331)
T 4aaa_A          146 IHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEV---YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF  219 (331)
T ss_dssp             CCCCCCGGGEEECTT---SCEEECCCTTC---------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHH
T ss_pred             EccCcChheEEEcCC---CcEEEEeCCCceeecCCccc---cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHH
Confidence            999999999999766   89999999998765432211   1345689999999999876 6789999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhh--------------------------CChhhhhcCCcHHHHHHHHHHhcCCCC
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLT--------------------------MTPEAICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      +|..||......   ..+..+......                          .......+.+|+.+.+++.+||+.||+
T Consensus       220 ~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  296 (331)
T 4aaa_A          220 MGEPLFPGDSDI---DQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPD  296 (331)
T ss_dssp             HSSCSCCCSSHH---HHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGG
T ss_pred             hCCCCCCCCCcH---HHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcc
Confidence            999999875332   222222221111                          111222346899999999999999999


Q ss_pred             CCCChHHHHH
Q psy2769         222 EEPNYGKLRD  231 (257)
Q Consensus       222 ~Rp~~~~~~~  231 (257)
                      +||+++++++
T Consensus       297 ~Rpt~~ell~  306 (331)
T 4aaa_A          297 KRPFCAELLH  306 (331)
T ss_dssp             GSCCGGGGGG
T ss_pred             cCCCHHHHhc
Confidence            9999999876

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=4.3e-39  Score=257.30  Aligned_cols=206  Identities=21%  Similarity=0.238  Sum_probs=166.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. ||||+++++++......++|||++ +++|.+++.. ...+++..+..++.|++.||.+||+.|
T Consensus        54 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~  131 (276)
T 2h6d_A           54 VVGKIKREIQNLKLFR-HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICK-HGRVEEMEARRLFQQILSAVDYCHRHM  131 (276)
T ss_dssp             CHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhcCC-CCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3457889999999998 999999999999999999999999 8999999985 457999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.......    ......+++.|+|||.+.+... +.++||||||+++|+|
T Consensus       132 i~H~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l  204 (276)
T 2h6d_A          132 VVHRDLKPENVLLDAH---MNAKIADFGLSNMMSDGE----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL  204 (276)
T ss_dssp             SSCCCCCGGGEEECTT---SCEEECCCCGGGCCCC-----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             CccCCCChhhEEECCC---CCEEEeecccccccCCCc----ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHH
Confidence            9999999999999766   889999999987654321    1134568899999999988765 5899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||...   ........+......     .+..+++.+.+++.+||+.||++||+++++++
T Consensus       205 ~~g~~p~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          205 LCGTLPFDDE---HVPTLFKKIRGGVFY-----IPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHCCCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCCCCCCCC---cHHHHHHHhhcCccc-----CchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            9999999874   233333333332221     22567899999999999999999999999987

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.3e-38  Score=269.63  Aligned_cols=212  Identities=20%  Similarity=0.219  Sum_probs=171.6

Q ss_pred             ccccHHHHHHHHHhc-----CCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLH-----GAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...+.+|+.++..++     +|+||+++++++......++|||+++++|.+++.... ..+++..+..++.|++.||.||
T Consensus       137 ~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~L  216 (429)
T 3kvw_A          137 HRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL  216 (429)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            456788999999986     4679999999999999999999999889999998653 4599999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.||+||||||+||+++.+. ...++|+|||++......      .....+++.|+|||++.+..++.++|||||||++
T Consensus       217 H~~~ivHrDlKp~NILl~~~~-~~~vkL~DFG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il  289 (429)
T 3kvw_A          217 HKNRIIHCDLKPENILLKQQG-RSGIKVIDFGSSCYEHQR------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCIL  289 (429)
T ss_dssp             HHHTEECSCCSGGGEEESSTT-SCCEEECCCTTCEETTCC------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHH
T ss_pred             HHCCeecCCCCHHHeEEccCC-CcceEEeecccceecCCc------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHH
Confidence            999999999999999998651 123999999998764332      1456789999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCCh----------------------------------------------
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP----------------------------------------------  197 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------  197 (257)
                      |+|++|..||.+...   ...+..+.........                                              
T Consensus       290 ~elltG~~pf~~~~~---~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (429)
T 3kvw_A          290 AELLTGYPLLPGEDE---GDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRG  366 (429)
T ss_dssp             HHHHHSSCSSCCSSH---HHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEEC
T ss_pred             HHHHhCCCCCCCCCH---HHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccC
Confidence            999999999987533   2333333222110000                                              


Q ss_pred             --------hhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         198 --------EAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       198 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                              .......++.+.++|++||+.||++|||++++++
T Consensus       367 ~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          367 PPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             STTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence                    0011234788999999999999999999999986

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.3e-39  Score=260.18  Aligned_cols=212  Identities=22%  Similarity=0.232  Sum_probs=173.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++.+. ||||+++++++..++..++|||++ +++|.+++.. ...+++..+..++.|++.||.+||+.|
T Consensus        48 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~  125 (276)
T 2yex_A           48 CPENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (276)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHhcC-CCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3467899999999997 999999999999999999999999 8899998873 457999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l  166 (257)
                      ++|+||+|+||+++.+   +.++|+|||.+.......... ......+++.|+|||.+.+..+ +.++||||||+++|+|
T Consensus       126 i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l  201 (276)
T 2yex_A          126 ITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRER-LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM  201 (276)
T ss_dssp             EECSCCSGGGEEECTT---CCEEECCCTTCEECEETTEEC-CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHH
T ss_pred             eeccCCChHHEEEccC---CCEEEeeCCCccccCCCcchh-cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHH
Confidence            9999999999999866   889999999987654322111 1145578999999999987765 6789999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|..||.........  ........   ........+|+.+.++|.+||+.||++||+++++++
T Consensus       202 ~~g~~p~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          202 LAGELPWDQPSDSCQE--YSDWKEKK---TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHSSCCCSCSCTTSHH--HHHHHTTC---TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HhCCCCCCCCchHHHH--HHHhhhcc---cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            9999999876543321  11111111   111122568999999999999999999999998865

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.5e-40  Score=266.07  Aligned_cols=221  Identities=20%  Similarity=0.268  Sum_probs=170.2

Q ss_pred             ccccHHHHHHHHH--hcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEK--LHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        10 ~~~~~~E~~~~~~--l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ...+..|.+++..  +. ||||+++++++..    ....++||||+ +++|.++++  ...+++..+..++.|++.||.|
T Consensus        44 ~~~~~~e~~~~~~~~l~-h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~  120 (301)
T 3q4u_A           44 EKSWFRETELYNTVMLR-HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTVSCLRIVLSIASGLAH  120 (301)
T ss_dssp             HHHHHHHHHHHHHTCCC-CTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHT--TCCBCHHHHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHhhcc-CcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHh--hcccCHHHHHHHHHHHHHHHHH
Confidence            3456778888888  55 9999999998654    34689999999 899999997  5679999999999999999999


Q ss_pred             HH--------hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCC-----
Q psy2769          83 VH--------RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWL-----  148 (257)
Q Consensus        83 lh--------~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~-----  148 (257)
                      ||        +.|++|+||||+||+++.+   +.++|+|||++.......... .......||+.|+|||.+.+.     
T Consensus       121 lH~~~~~~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  197 (301)
T 3q4u_A          121 LHIEIFGTQGKPAIAHRDLKSKNILVKKN---GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDC  197 (301)
T ss_dssp             HHSCBCSTTCBCEEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTC
T ss_pred             HHHhhhhccCCCCeecCCCChHhEEEcCC---CCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCc
Confidence            99        9999999999999999866   899999999987654432211 111345799999999999876     


Q ss_pred             -CCCCcchHHHHHHHHHHHHhC----------CCCCCCCCCcc-HHHHHHHHHHHHh---hCChhhhhcCCcHHHHHHHH
Q psy2769         149 -DQSPRDDLEALCYTLVYFLRG----------KLPWQSIKSDN-EETRMQRVTEMKL---TMTPEAICEGTPPEFAEFLR  213 (257)
Q Consensus       149 -~~~~~~Dv~slg~~l~~l~~g----------~~p~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~  213 (257)
                       .++.++||||||+++|+|++|          ..||....... .............   ..+.......+++.+.+++.
T Consensus       198 ~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  277 (301)
T 3q4u_A          198 FDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK  277 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHH
T ss_pred             ccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHH
Confidence             344689999999999999999          88887654332 1122222111111   11111122335678999999


Q ss_pred             HHhcCCCCCCCChHHHHHHHHHH
Q psy2769         214 YCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       214 ~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      +||+.||++|||++++++.|+++
T Consensus       278 ~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          278 ECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHhhcChhhCCCHHHHHHHHhcc
Confidence            99999999999999999999875

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=9.6e-39  Score=261.20  Aligned_cols=212  Identities=21%  Similarity=0.296  Sum_probs=166.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeee------CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTS------GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISR   79 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~------~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~   79 (257)
                      ...+.+.+|+.++.++.+||||+++++++..      ....++||||+ +++|.+++... ...+++..+..++.|++.|
T Consensus        62 ~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  141 (326)
T 2x7f_A           62 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG  141 (326)
T ss_dssp             STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence            3456799999999999669999999999876      45789999999 88999999864 3579999999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcc
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRD  154 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~  154 (257)
                      |.+||+.|++|+||+|+||+++.+   +.++|+|||++........   ......+++.|+|||.+.     +..++.++
T Consensus       142 l~~lH~~~ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  215 (326)
T 2x7f_A          142 LSHLHQHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKS  215 (326)
T ss_dssp             HHHHHHTTCCCCCCSGGGEEECTT---CCEEECCCTTTC----------------CCGGGCCHHHHC--------CCTTH
T ss_pred             HHHHHHCCccccCCcHHHEEEcCC---CCEEEeeCcCceecCcCcc---ccccccCCccccChhhhccccccCcCCCccc
Confidence            999999999999999999999766   8899999999876543211   113456899999999997     45678999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||||||+++|+|++|..||.....   ......+....   .+......+|+.+.++|.+||..||.+||+++++++
T Consensus       216 Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          216 DLWSLGITAIEMAEGAPPLCDMHP---MRALFLIPRNP---APRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTSCH---HHHHHHHHHSC---CCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCcH---HHHHHHhhcCc---cccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            999999999999999999986432   22222222211   111123568999999999999999999999999876

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.5e-39  Score=261.91  Aligned_cols=212  Identities=17%  Similarity=0.268  Sum_probs=170.6

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++..+. ||||+++++++...+..++|||++ +++|.+++......+++..+..++.|++.||.+||+.
T Consensus        58 ~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  136 (302)
T 2j7t_A           58 EELEDYIVEIEILATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK  136 (302)
T ss_dssp             CCHHHHHHHHHHHHHCC-CTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcCC-CCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            34567899999999997 999999999999999999999999 9999999886677899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh-----cCCCCCCcchHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH-----QWLDQSPRDDLEALCY  161 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~-----~~~~~~~~~Dv~slg~  161 (257)
                      |++|+||+|+||+++.+   +.++|+|||++........   ......+++.|+|||.+     .+..++.++||||||+
T Consensus       137 ~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~  210 (302)
T 2j7t_A          137 RIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQ---KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI  210 (302)
T ss_dssp             TCCCCCCSGGGEEECTT---SCEEECCCHHHHHHHHHHH---C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHH
T ss_pred             CcccCCCCHHHEEECCC---CCEEEEECCCCcccccccc---ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHH
Confidence            99999999999999766   8899999998643221100   11345689999999998     3567789999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|+|++|..||.....   ......+.....+  .......+|..+.++|.+||+.||++||+++++++
T Consensus       211 il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          211 TLIEMAQIEPPHHELNP---MRVLLKIAKSDPP--TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHHHSSCTTTTSCH---HHHHHHHHHSCCC--CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHhcCCCCCccCCH---HHHHHHHhccCCc--ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            99999999999987532   2222333222211  11223568899999999999999999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=6.2e-39  Score=258.71  Aligned_cols=212  Identities=23%  Similarity=0.260  Sum_probs=171.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS--KRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+.+|+.++..+. ||||+++++++...+..++|||++ +++|.+++....  ..+++..+..++.|++.||.+||+
T Consensus        62 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  140 (295)
T 2clq_A           62 YSQPLHEEIALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD  140 (295)
T ss_dssp             --HHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh
Confidence            3567889999999997 999999999999999999999999 999999998642  356788999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC--CCCcchHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD--QSPRDDLEALCYTL  163 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Dv~slg~~l  163 (257)
                      .|++|+||+|+||+++.+  ++.++|+|||.+........   ......+++.|+|||.+.+..  ++.++||||||+++
T Consensus       141 ~~i~H~dl~p~Nil~~~~--~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  215 (295)
T 2clq_A          141 NQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINP---CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI  215 (295)
T ss_dssp             TTEECCCCSGGGEEEETT--TCCEEECCTTTCEESCC--------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHH
T ss_pred             CCEEccCCChhhEEEECC--CCCEEEeecccccccCCCCC---cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHH
Confidence            999999999999999851  27899999999877543321   114557899999999997653  78899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||........  .....   ......+..+..+++.+.+++.+||+.||++||+++++++
T Consensus       216 ~~l~~g~~pf~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          216 IEMATGKPPFYELGEPQA--AMFKV---GMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHTSCTTGGGSSHHH--HHHHH---HHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHCCCCccCCCchhH--HHHhh---ccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            999999999986533221  11111   1112223344678999999999999999999999999865

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.1e-39  Score=269.17  Aligned_cols=207  Identities=18%  Similarity=0.276  Sum_probs=158.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+++.+|+.+++.++ ||||+++++++...      ...++++++++++|.+++.  ...+++..+..++.|++.||.||
T Consensus        72 ~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~L  148 (367)
T 2fst_X           72 AKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYI  148 (367)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEEecCCccccCCeEEEEecccCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Confidence            457889999999998 99999999998653      4679999999999999888  46799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      |+.|++||||||+||+++.+   +.++|+|||++......      .....+|+.|+|||++.+ ..++.++||||+||+
T Consensus       149 H~~givH~Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  219 (367)
T 2fst_X          149 HSADIIHRDLKPSNLAVNED---CELKILDFGLARHTADE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  219 (367)
T ss_dssp             HHTTCCCCCCCGGGEEECTT---CCEEECC---------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHH
T ss_pred             HHCCeeeCCCCHhhEEECCC---CCEEEeecccccccccc------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHH
Confidence            99999999999999999866   89999999998764322      144678999999999987 578999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHh--------------------------hCChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKL--------------------------TMTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|+|++|..||.+....+.   +..+.....                          ...........++.+.++|.+||
T Consensus       220 l~ell~g~~pf~~~~~~~~---l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL  296 (367)
T 2fst_X          220 MAELLTGRTLFPGTDHIDQ---LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  296 (367)
T ss_dssp             HHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHS
T ss_pred             HHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhC
Confidence            9999999999987543322   222222110                          01122334567899999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++|||++++++
T Consensus       297 ~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          297 VLDSDKRITAAQALA  311 (367)
T ss_dssp             CSSGGGSCCHHHHHT
T ss_pred             CCCcccCcCHHHHhc
Confidence            999999999999976

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.3e-38  Score=260.84  Aligned_cols=211  Identities=17%  Similarity=0.212  Sum_probs=169.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+.+.+|+.++.++.+||||+++++++..  ....++|||++ +++|.+++.    .+++..+..++.|++.||.|||+
T Consensus        73 ~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~  148 (330)
T 3nsz_A           73 KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHS  148 (330)
T ss_dssp             CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHh
Confidence            456799999999999989999999999987  56789999999 899988876    48999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLV  164 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~  164 (257)
                      .|++|+||||+||+++.+  ...++|+|||++........    .....++..|+|||.+.+ ..++.++||||||+++|
T Consensus       149 ~~ivH~Dikp~Nil~~~~--~~~~kl~Dfg~a~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  222 (330)
T 3nsz_A          149 MGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQE----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA  222 (330)
T ss_dssp             TTEECCCCSGGGEEEETT--TTEEEECCCTTCEECCTTCC----CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             CCeeeCCCCHHHEEEcCC--CCEEEEEeCCCceEcCCCCc----cccccccccccChhhhcCCCcCCchhhHHHHHHHHH
Confidence            999999999999999855  13899999999986644322    144578999999999987 56899999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHh-------------hC-------------------ChhhhhcCCcHHHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKL-------------TM-------------------TPEAICEGTPPEFAEFL  212 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------~~-------------------~~~~~~~~~~~~~~~li  212 (257)
                      +|++|..||......  ...+..+.....             ..                   ........+++.+.++|
T Consensus       223 ~ll~g~~p~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  300 (330)
T 3nsz_A          223 SMIFRKEPFFHGHDN--YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL  300 (330)
T ss_dssp             HHHHTCSSSSCCSSH--HHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHH
T ss_pred             HHHhCCCCcccCCch--HHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHH
Confidence            999999999654322  122221111100             00                   00111123789999999


Q ss_pred             HHHhcCCCCCCCChHHHHH
Q psy2769         213 RYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       213 ~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .+||+.||++|||++++++
T Consensus       301 ~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          301 DKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HTTSCSSGGGSCCHHHHHT
T ss_pred             HHHhcCCcccCCCHHHHhc
Confidence            9999999999999999876

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.3e-39  Score=274.92  Aligned_cols=212  Identities=19%  Similarity=0.209  Sum_probs=166.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++.++. ||||+++++++..+ ..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus       184 ~~~~~~E~~~l~~l~-hpniv~l~~~~~~~-~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i  260 (419)
T 3i6u_A          184 ALNVETEIEILKKLN-HPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGI  260 (419)
T ss_dssp             -CCHHHHHHHHHHCC-CTTBCCCCEEEESS-EEEEEEECCTTCBGGGGTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhCC-CCCEeeEEEEEecC-ceEEEEEcCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            346899999999997 99999999998654 589999999 9999888773 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC---CCCCCcchHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW---LDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~Dv~slg~~l~~  165 (257)
                      +|+||||+||+++.++....+||+|||++.......    ......|++.|+|||++.+   ..++.++||||||+++|+
T Consensus       261 vHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~  336 (419)
T 3i6u_A          261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI  336 (419)
T ss_dssp             CCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHH
T ss_pred             cccCCChHhEEEecCCCcceEEEeecccceecCCCc----cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHH
Confidence            999999999999876445679999999997654321    1245678999999999864   456789999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||..........  ..+..... ...+.....+++.+.++|.+||+.||++||+++++++
T Consensus       337 lltg~~pf~~~~~~~~~~--~~i~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          337 CLSGYPPFSEHRTQVSLK--DQITSGKY-NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HHHSSCSSCCCSSSCCHH--HHHHTTCC-CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHCCCCCCCCcchHHHH--HHHhcCCC-CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            999999998754332211  11222222 2234455678999999999999999999999999875

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=7.6e-40  Score=267.79  Aligned_cols=220  Identities=15%  Similarity=0.119  Sum_probs=173.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+.+|+.++..+. ||||+++++++......++||||+ +++|.+++...   ...+++..+..++.|++.||.+||+
T Consensus        71 ~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  149 (326)
T 3uim_A           71 ELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD  149 (326)
T ss_dssp             CCHHHHHHHGGGTCC-CTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcc-CCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            346899999999998 999999999999999999999999 99999999854   2349999999999999999999999


Q ss_pred             C---CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          86 K---KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        86 ~---~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      .   |++|+||||+||+++.+   +.++|+|||++.........  ......|++.|+|||.+.+..++.++||||||++
T Consensus       150 ~~~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  224 (326)
T 3uim_A          150 HCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVM  224 (326)
T ss_dssp             SSSSCEECCCCSGGGEEECTT---CCEEECCCSSCEECCSSSSC--EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHH
T ss_pred             CCCCCeEeCCCchhhEEECCC---CCEEeccCccccccCccccc--ccccccCCcCccCHHHhccCCCCccccchhHHHH
Confidence            9   99999999999999766   89999999999876443221  1244568999999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCCC-----CccHHHHHHHHHHHH------hhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLRGKLPWQSIK-----SDNEETRMQRVTEMK------LTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|+|++|..||....     ...............      ............++.+.+++..||+.||.+|||+.++++
T Consensus       225 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  304 (326)
T 3uim_A          225 LLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVR  304 (326)
T ss_dssp             HHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred             HHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHH
Confidence            999999999996311     111110000000000      000001111223467999999999999999999999999


Q ss_pred             HHHH
Q psy2769         232 SFRN  235 (257)
Q Consensus       232 ~l~~  235 (257)
                      .|+.
T Consensus       305 ~L~~  308 (326)
T 3uim_A          305 MLEG  308 (326)
T ss_dssp             HHHT
T ss_pred             HhcC
Confidence            9875

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=1.4e-38  Score=256.27  Aligned_cols=208  Identities=20%  Similarity=0.275  Sum_probs=170.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ..+.+.+|+.+++.+. ||||+++++++..    ....++||||+ +++|.+++.. ...++...+..++.|++.||.||
T Consensus        68 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~l  145 (290)
T 1t4h_A           68 ERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFL  145 (290)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHH-ccCCCHHHHHHHHHHHHHHHHHH
Confidence            3456889999999998 9999999998865    35689999999 8999999985 46799999999999999999999


Q ss_pred             HhCC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHH
Q psy2769          84 HRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY  161 (257)
Q Consensus        84 h~~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~  161 (257)
                      |+.|  ++|+||+|+||+++.  .++.++|+|||++......     ......+++.|+|||.+.+ .++.++||||||+
T Consensus       146 H~~~~~i~H~dikp~Nil~~~--~~~~~kl~Dfg~~~~~~~~-----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~  217 (290)
T 1t4h_A          146 HTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS-----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGM  217 (290)
T ss_dssp             HTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGGGGCCTT-----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHH
T ss_pred             HcCCCCEEECCCCHHHEEEEC--CCCCEEEeeCCCccccccc-----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHH
Confidence            9999  999999999999972  2278999999998653322     1134568999999998875 5889999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|+|++|..||.......  .....+   .....+.......++.+.++|.+||+.||++||+++++++
T Consensus       218 ~l~~l~~g~~pf~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          218 CMLEMATSEYPYSECQNAA--QIYRRV---TSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHSSCTTTTCSSHH--HHHHHH---TTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCCCCCCCcCcHH--HHHHHH---hccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            9999999999998754322  222222   2222344455678899999999999999999999999875

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=5e-38  Score=256.90  Aligned_cols=212  Identities=17%  Similarity=0.185  Sum_probs=173.0

Q ss_pred             ccccHHHHHHHHHhc--CCCCCcEEEeeee-----eCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLH--GAPGVPHVMGYGT-----SGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~--~~~~i~~~~~~~~-----~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ...+.+|+.+++.+.  +||||+++++++.     .....++|||+++++|.+++... ...+++..+..++.|++.||.
T Consensus        55 ~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~  134 (326)
T 1blx_A           55 PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD  134 (326)
T ss_dssp             BCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Confidence            456889999999885  5999999999987     45678999999988999999864 345999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY  161 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~  161 (257)
                      +||+.|++|+||+|+||+++.+   +.++|+|||++.......    ......+++.|+|||.+.+..++.++||||||+
T Consensus       135 ~lH~~gi~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  207 (326)
T 1blx_A          135 FLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQM----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGC  207 (326)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTT---CCEEECSCCSCCCCCGGG----GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHH
T ss_pred             HHHHCCceeccCCHHHeEEcCC---CCEEEecCcccccccCCC----CccccccccceeCHHHHhcCCCCcchhHHHHHH
Confidence            9999999999999999999766   899999999987543221    124457899999999999989999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh----------------------CChhhhhcCCcHHHHHHHHHHhcCC
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT----------------------MTPEAICEGTPPEFAEFLRYCRGLA  219 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~li~~~l~~~  219 (257)
                      ++|+|++|..||.....   ...+..+......                      .........+++.+.+++.+||+.|
T Consensus       208 il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  284 (326)
T 1blx_A          208 IFAEMFRRKPLFRGSSD---VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN  284 (326)
T ss_dssp             HHHHHHHSSCSCCCSSH---HHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSS
T ss_pred             HHHHHHcCCCCCCCCCH---HHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCC
Confidence            99999999999987533   2333333322110                      0112233568999999999999999


Q ss_pred             CCCCCChHHHHH
Q psy2769         220 FSEEPNYGKLRD  231 (257)
Q Consensus       220 p~~Rp~~~~~~~  231 (257)
                      |++||++.++++
T Consensus       285 P~~Rpt~~e~l~  296 (326)
T 1blx_A          285 PAKRISAYSALS  296 (326)
T ss_dssp             TTTSCCHHHHHT
T ss_pred             cccCCCHHHHhc
Confidence            999999999874

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.2e-39  Score=268.57  Aligned_cols=212  Identities=22%  Similarity=0.292  Sum_probs=169.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-K   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~   87 (257)
                      .+.+.+|+.+++.+. ||||+++++++..++..++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+. |
T Consensus        75 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~  152 (360)
T 3eqc_A           75 RNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHK  152 (360)
T ss_dssp             HHHHHHHHGGGGGCC-CTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHCC-CCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            457889999999997 999999999999999999999999 8999999985 45799999999999999999999986 9


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++|+||||+||+++.+   +.++|+|||++.......     .....+++.|+|||++.+..++.++||||||+++|+|+
T Consensus       153 i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  224 (360)
T 3eqc_A          153 IMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA  224 (360)
T ss_dssp             CCCSCCSGGGEEECTT---CCEEECCCCCCHHHHHHC---------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHH
T ss_pred             EEcCCccHHHEEECCC---CCEEEEECCCCccccccc-----ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHH
Confidence            9999999999999876   889999999886543221     13457899999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHH-----------------------------------HHHHHHhhCChhh-hhcCCcHHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQ-----------------------------------RVTEMKLTMTPEA-ICEGTPPEFAEF  211 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~-~~~~~~~~~~~l  211 (257)
                      +|..||...........+.                                   ...........+. ....++..+.++
T Consensus       225 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  304 (360)
T 3eqc_A          225 VGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF  304 (360)
T ss_dssp             HTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHH
Confidence            9999998743222111110                                   0000000011111 113478899999


Q ss_pred             HHHHhcCCCCCCCChHHHHH
Q psy2769         212 LRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       212 i~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |.+||+.||++|||++++++
T Consensus       305 i~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          305 VNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             HHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHhhcChhhCCCHHHHhh
Confidence            99999999999999999976

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.3e-38  Score=264.04  Aligned_cols=210  Identities=15%  Similarity=0.169  Sum_probs=164.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeee-----CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTS-----GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~-----~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +.+.+|+.++++++ ||||+++++++..     ....++|||+++++|.+.+......+++..+..++.|++.||.|||+
T Consensus        74 ~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  152 (362)
T 3pg1_A           74 KRVLREIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE  152 (362)
T ss_dssp             HHHHHHHHHHHHCC-CTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999998 9999999999854     33679999999889999998656679999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLV  164 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~  164 (257)
                      .|++|+||||+||+++.+   +.++|+|||++.......    ......+++.|+|||.+.+ ..++.++||||||+++|
T Consensus       153 ~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  225 (362)
T 3pg1_A          153 AGVVHRDLHPGNILLADN---NDITICDFNLAREDTADA----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA  225 (362)
T ss_dssp             TTCCCCCCCGGGEEECTT---CCEEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHH
T ss_pred             CcCEecCCChHHEEEcCC---CCEEEEecCccccccccc----ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHH
Confidence            999999999999999766   889999999987543321    1144578899999999987 56899999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhC---------------------------ChhhhhcCCcHHHHHHHHHHhc
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTM---------------------------TPEAICEGTPPEFAEFLRYCRG  217 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~li~~~l~  217 (257)
                      +|++|..||.+...   ...+..+.......                           ......+.+++.+.++|.+||+
T Consensus       226 ~l~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  302 (362)
T 3pg1_A          226 EMFNRKALFRGSTF---YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLE  302 (362)
T ss_dssp             HHHHSSCSCCCSSH---HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTC
T ss_pred             HHHhCCCCCCCCCH---HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhc
Confidence            99999999987433   22223322211110                           1223345678899999999999


Q ss_pred             CCCCCCCChHHHHH
Q psy2769         218 LAFSEEPNYGKLRD  231 (257)
Q Consensus       218 ~~p~~Rp~~~~~~~  231 (257)
                      .||++|||++++++
T Consensus       303 ~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          303 FNPQRRISTEQALR  316 (362)
T ss_dssp             SSGGGSCCHHHHHT
T ss_pred             CChhhCCCHHHHHc
Confidence            99999999999976

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.9e-38  Score=263.93  Aligned_cols=216  Identities=21%  Similarity=0.252  Sum_probs=170.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeee--------------------------------------CCccEEEEeccCCC
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTS--------------------------------------GDYNILVMELLGPS   52 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~--------------------------------------~~~~~~v~e~~~~~   52 (257)
                      ....+|+.+++.+. ||||+++++++..                                      ....++||||++++
T Consensus        45 ~~~~~E~~il~~l~-hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  123 (383)
T 3eb0_A           45 RYKNRELDIMKVLD-HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDT  123 (383)
T ss_dssp             TSCCHHHHHHTTCC-CTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEE
T ss_pred             chHHHHHHHHHHcC-CCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCcc
Confidence            34568999999998 9999999999843                                      23488999999889


Q ss_pred             HHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCC
Q psy2769          53 LEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR  129 (257)
Q Consensus        53 L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~  129 (257)
                      |.+.+...   ...+++..+..++.|++.||.|||+.|++||||||+||+++.  .++.++|+|||++........    
T Consensus       124 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a~~~~~~~~----  197 (383)
T 3eb0_A          124 LHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEP----  197 (383)
T ss_dssp             HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTCEECCTTSC----
T ss_pred             HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCCcccCCCCC----
Confidence            88888742   567999999999999999999999999999999999999973  227899999999987644322    


Q ss_pred             ccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC------------
Q psy2769         130 TRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT------------  196 (257)
Q Consensus       130 ~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------  196 (257)
                      .....+++.|+|||.+.+.. ++.++||||+|+++|+|++|..||.+....   ..+..+........            
T Consensus       198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~i~~~~g~p~~~~~~~~~~~~~  274 (383)
T 3eb0_A          198 SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI---DQLVRIIQIMGTPTKEQMIRMNPHYT  274 (383)
T ss_dssp             CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHHHHHHHCTTC-
T ss_pred             CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH---HHHHHHHHHhCCCCHHHHHHhCcccc
Confidence            14557899999999998754 899999999999999999999999874333   22333322111100            


Q ss_pred             ------------hhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHH
Q psy2769         197 ------------PEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNL  236 (257)
Q Consensus       197 ------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~  236 (257)
                                  .......+|+.+.++|.+||..||++|||+.++++  .++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          275 EVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             -CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             cccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence                        01123458899999999999999999999999975  44444

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=8.6e-39  Score=262.34  Aligned_cols=219  Identities=20%  Similarity=0.267  Sum_probs=161.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeee--------eCCccEEEEeccCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGT--------SGDYNILVMELLGPSLEDLFQYC--SKRFSLKTVLMLADQMISR   79 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~--------~~~~~~~v~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~   79 (257)
                      .+.+.+|+.++.++.+||||+++++++.        .....+++||+++++|.+++...  ...+++..+..++.|++.|
T Consensus        69 ~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~  148 (337)
T 3ll6_A           69 NRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA  148 (337)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHH
Confidence            4568899999999988999999999984        34458999999988999998753  4569999999999999999


Q ss_pred             HHHHHhCC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC---------CCccCCCCcccccChhHh---
Q psy2769          80 LEHVHRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR---------IRTRGLTGTARYASVNAH---  145 (257)
Q Consensus        80 l~~lh~~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~---  145 (257)
                      |.|||+.|  ++|+||||+||+++.+   +.++|+|||++..........         .......+++.|+|||.+   
T Consensus       149 l~~LH~~~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  225 (337)
T 3ll6_A          149 VQHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY  225 (337)
T ss_dssp             HHHHHTSSSCCBCCCCCGGGCEECTT---SCEEBCCCTTCBCCSSCC-------------------------------CC
T ss_pred             HHHHHhCCCCEEEccCCcccEEECCC---CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc
Confidence            99999999  9999999999999866   889999999997665432111         011244689999999998   


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         146 QWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       146 ~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      .+..++.++||||||+++|+|++|..||.......       +.........   ....++.+.+++.+||+.||.+||+
T Consensus       226 ~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps  295 (337)
T 3ll6_A          226 SNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-------IVNGKYSIPP---HDTQYTVFHSLIRAMLQVNPEERLS  295 (337)
T ss_dssp             TTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------------CCCCT---TCCSSGGGHHHHHHHSCSSGGGSCC
T ss_pred             ccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-------hhcCcccCCc---ccccchHHHHHHHHHccCChhhCcC
Confidence            55567889999999999999999999997632211       1111222111   2567788999999999999999999


Q ss_pred             hHHHHHHHHHHHHhcc
Q psy2769         226 YGKLRDSFRNLLENKE  241 (257)
Q Consensus       226 ~~~~~~~l~~~~~~~~  241 (257)
                      ++++++.|+++....+
T Consensus       296 ~~e~l~~l~~~~~~~~  311 (337)
T 3ll6_A          296 IAEVVHQLQEIAAARN  311 (337)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhccC
Confidence            9999999999988665

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.5e-38  Score=264.61  Aligned_cols=208  Identities=18%  Similarity=0.197  Sum_probs=158.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.+++.+. ||||+++++++....      ..++||||++++|.+.+.   ..+++..+..++.|++.||.||
T Consensus        68 ~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~l  143 (371)
T 2xrw_A           68 AKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHL  143 (371)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHH---SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCccceEEeeccccccccccceEEEEEcCCCCHHHHHh---hccCHHHHHHHHHHHHHHHHHH
Confidence            456889999999998 999999999987654      679999999888988886   4689999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.|++|+||||+||+++.+   +.+||+|||++.......    ......+++.|+|||++.+..++.++||||||+++
T Consensus       144 H~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  216 (371)
T 2xrw_A          144 HSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM  216 (371)
T ss_dssp             HHTTCCCSCCCGGGEEECTT---SCEEECCCCC--------------------CTTCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred             HHCCeecccCCHHHEEEcCC---CCEEEEEeeccccccccc----ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHH
Confidence            99999999999999999866   899999999987654321    11445789999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC-------------------------hh------------hhhcCCcH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-------------------------PE------------AICEGTPP  206 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~------------~~~~~~~~  206 (257)
                      |+|++|..||.+....   ..+..+........                         ..            ......++
T Consensus       217 ~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (371)
T 2xrw_A          217 GEMIKGGVLFPGTDHI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKAS  293 (371)
T ss_dssp             HHHHHSSCSSCCSSHH---HHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccH
Confidence            9999999999874332   22222211100000                         00            00011256


Q ss_pred             HHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         207 EFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       207 ~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .+.++|.+||..||++|||++++++
T Consensus       294 ~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          294 QARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHCcCChhhCCCHHHHhC
Confidence            7999999999999999999999976

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=5e-38  Score=263.33  Aligned_cols=209  Identities=16%  Similarity=0.174  Sum_probs=166.2

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ...+|+.+++.++ ||||+++++++....      ..++||||+.+++.+.+...   ...+++..+..++.|++.||.|
T Consensus        78 ~~~~E~~il~~l~-h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~  156 (394)
T 4e7w_A           78 FKNRELQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY  156 (394)
T ss_dssp             SCCHHHHHHHTCC-CTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHhCC-CCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence            3457999999998 999999999986433      38899999977766665532   5679999999999999999999


Q ss_pred             HHhCCccccCCCCCceEee-ccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMG-VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALC  160 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~-~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg  160 (257)
                      ||+.|++||||||+||+++ .+   +.+||+|||++........    .....+++.|+|||++.+. .++.++||||+|
T Consensus       157 LH~~~ivHrDlkp~Nill~~~~---~~~kL~DFG~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  229 (394)
T 4e7w_A          157 IHSIGICHRDIKPQNLLLDPPS---GVLKLIDFGSAKILIAGEP----NVSYICSRYYRAPELIFGATNYTTNIDIWSTG  229 (394)
T ss_dssp             HHHTTEECSCCSGGGEEEETTT---TEEEECCCTTCEECCTTCC----CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             HHHCCccCCCCCHHHEEEcCCC---CcEEEeeCCCcccccCCCC----CcccccCcCccCHHHHcCCCCCCcHHHHHHHH
Confidence            9999999999999999998 44   8999999999987644322    1456789999999999765 489999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC------------------------hhhhhcCCcHHHHHHHHHHh
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT------------------------PEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~li~~~l  216 (257)
                      |++|+|++|..||.+....   ..+..+........                        .......+++.+.++|.+||
T Consensus       230 ~il~ell~g~~pf~~~~~~---~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  306 (394)
T 4e7w_A          230 CVMAELMQGQPLFPGESGI---DQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLL  306 (394)
T ss_dssp             HHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHh
Confidence            9999999999999985332   22233322111000                        01122358899999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++|||+.++++
T Consensus       307 ~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          307 EYTPSARLTAIEALC  321 (394)
T ss_dssp             CSSGGGSCCHHHHHT
T ss_pred             CCChhhCCCHHHHhc
Confidence            999999999999876

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.6e-38  Score=259.03  Aligned_cols=215  Identities=17%  Similarity=0.175  Sum_probs=168.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeee--------------eCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGT--------------SGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD   74 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~--------------~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~   74 (257)
                      ..+.+.+|+.+++++. ||||+++++++.              .....++||||++++|.+++.  ...+++..+..++.
T Consensus        51 ~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~~~~~~~~~~~  127 (320)
T 2i6l_A           51 SVKHALREIKIIRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE--QGPLLEEHARLFMY  127 (320)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHT--TCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCCeeEEEEeccccccccccccccccccCceeEEeeccCCCHHHHhh--cCCccHHHHHHHHH
Confidence            3467889999999998 999999999873              345789999999889999987  56799999999999


Q ss_pred             HHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCc
Q psy2769          75 QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPR  153 (257)
Q Consensus        75 ~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~  153 (257)
                      |++.||.+||+.|++|+||||+||+++.+  ++.++|+|||++.................++..|+|||.+.+ ..++.+
T Consensus       128 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  205 (320)
T 2i6l_A          128 QLLRGLKYIHSANVLHRDLKPANLFINTE--DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKA  205 (320)
T ss_dssp             HHHHHHHHHHHTTCBCCCCSGGGEEEETT--TTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHH
T ss_pred             HHHHHHHHHHhCCEecCCCCHHHEEEcCC--CCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCch
Confidence            99999999999999999999999999742  268999999998765433222222234567889999998875 567899


Q ss_pred             chHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHh-------------------------hCChhhhhcCCcHHH
Q psy2769         154 DDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKL-------------------------TMTPEAICEGTPPEF  208 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~  208 (257)
                      +||||||+++|+|++|..||......   ..+..+.....                         ..........+|+.+
T Consensus       206 ~Di~slG~il~el~~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (320)
T 2i6l_A          206 IDMWAAGCIFAEMLTGKTLFAGAHEL---EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREA  282 (320)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHH
T ss_pred             hhhHhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHH
Confidence            99999999999999999999875432   22222222110                         011223345789999


Q ss_pred             HHHHHHHhcCCCCCCCChHHHHH
Q psy2769         209 AEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       209 ~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .++|.+||+.||++||+++++++
T Consensus       283 ~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          283 VDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCCccccCCHHHHhC
Confidence            99999999999999999999976

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=273.19  Aligned_cols=227  Identities=18%  Similarity=0.243  Sum_probs=178.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCC--ccEEEEecc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD--YNILVMELL-GPSLEDLFQYCS--KRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~--~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ..+.+.+|+.++.++. ||||+++++++....  ..++||||+ +++|.+++....  ..+++..+..++.|++.||.||
T Consensus        50 ~~~~~~~E~~~l~~l~-hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L  128 (396)
T 4eut_A           50 PVDVQMREFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL  128 (396)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcC-CCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            3467789999999998 999999999988654  679999999 999999998542  2399999999999999999999


Q ss_pred             HhCCccccCCCCCceEeecc-CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC--------CCCCCcc
Q psy2769          84 HRKKIVHRDIKPDNFLMGVR-ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW--------LDQSPRD  154 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~-~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~--------~~~~~~~  154 (257)
                      |+.|++||||||+||++..+ ...+.++|+|||++.......    ......+++.|+|||.+.+        ..++.++
T Consensus       129 H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~  204 (396)
T 4eut_A          129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV  204 (396)
T ss_dssp             HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG----GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHH
T ss_pred             HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC----ccccccCCccccCHHHhhccccccccccCCCcHH
Confidence            99999999999999998322 233679999999998754432    1244578999999999865        4567789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCc-cHHHHHHHHHHHHhhCC--------------------hhhhhcCCcHHHHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSD-NEETRMQRVTEMKLTMT--------------------PEAICEGTPPEFAEFLR  213 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~li~  213 (257)
                      ||||||+++|+|++|..||...... ...+.+..+........                    .......+++.+.++++
T Consensus       205 DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~  284 (396)
T 4eut_A          205 DLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLA  284 (396)
T ss_dssp             HHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHH
Confidence            9999999999999999999765432 22333333333221100                    00111335667999999


Q ss_pred             HHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         214 YCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       214 ~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      +||+.||++||+++++.+.+.+++...
T Consensus       285 ~~L~~dP~~R~s~~e~l~~l~~il~~~  311 (396)
T 4eut_A          285 NILEADQEKCWGFDQFFAETSDILHRM  311 (396)
T ss_dssp             HHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred             HhhccChhhhccHHHHHHHHHHHhhce
Confidence            999999999999999999999988753

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=4.7e-39  Score=262.74  Aligned_cols=212  Identities=20%  Similarity=0.222  Sum_probs=171.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++.++. ||||+++++++.... .++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.|+
T Consensus        59 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  135 (322)
T 2ycf_A           59 ALNVETEIEILKKLN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVG-NKRLKEATCKLYFYQMLLAVQYLHENGI  135 (322)
T ss_dssp             --CHHHHHHHHHHCC-CTTBCCEEEEEESSS-EEEEEECCTTEETHHHHST-TCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhhHHHHHHHHHhCC-CCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            456899999999997 999999999997665 89999999 8899998873 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc---CCCCCCcchHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ---WLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~---~~~~~~~~Dv~slg~~l~~  165 (257)
                      +|+||||+||+++.++....++|+|||++.......    ......+++.|+|||.+.   ...++.++||||||+++|+
T Consensus       136 vH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~  211 (322)
T 2ycf_A          136 IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFI  211 (322)
T ss_dssp             ECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHH
T ss_pred             eccCCCHHHEEEecCCCCCeEEEccCccceeccccc----ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHH
Confidence            999999999999876444579999999987653321    112346899999999974   4567899999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||.........  ...+...... ..+.....+++.+.++|.+||..||++||+++++++
T Consensus       212 l~~g~~pf~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          212 CLSGYPPFSEHRTQVSL--KDQITSGKYN-FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHSSCSSCSTTCSSCH--HHHHHHTCCC-CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHhCCCCCcccchHHHH--HHHHHhCccc-cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            99999999875443211  1122222222 234445678999999999999999999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-38  Score=260.84  Aligned_cols=226  Identities=20%  Similarity=0.309  Sum_probs=172.4

Q ss_pred             cccHHHHHHHHHhc-CCCCCcEEEeeeeeC----CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLH-GAPGVPHVMGYGTSG----DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        11 ~~~~~E~~~~~~l~-~~~~i~~~~~~~~~~----~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .....|.+++..+. +||||+++++++...    ...++||||+ +++|.+++.  ...+++..+..++.|++.||.|||
T Consensus        74 ~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~lH  151 (337)
T 3mdy_A           74 ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK--STTLDAKSMLKLAYSSVSGLCHLH  151 (337)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHH
Confidence            34556666666552 499999999998876    6789999999 899999998  457999999999999999999999


Q ss_pred             hC--------CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCCCCCCc--
Q psy2769          85 RK--------KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWLDQSPR--  153 (257)
Q Consensus        85 ~~--------~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~--  153 (257)
                      +.        |++|+||||+||+++.+   +.++|+|||++.......... .......|++.|+|||.+.+...+..  
T Consensus       152 ~~~~~~~~~~~ivH~Dikp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  228 (337)
T 3mdy_A          152 TEIFSTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQ  228 (337)
T ss_dssp             SCBCSTTCBCCEECSCCCGGGEEECTT---SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTH
T ss_pred             HhhhhhccCCCEEecccchHHEEECCC---CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCcccc
Confidence            98        99999999999999866   899999999997664432211 11134579999999999988776655  


Q ss_pred             ----chHHHHHHHHHHHHhC----------CCCCCCCCCccH-HHHHHHHHHH-Hhh--CChhhhhcCCcHHHHHHHHHH
Q psy2769         154 ----DDLEALCYTLVYFLRG----------KLPWQSIKSDNE-ETRMQRVTEM-KLT--MTPEAICEGTPPEFAEFLRYC  215 (257)
Q Consensus       154 ----~Dv~slg~~l~~l~~g----------~~p~~~~~~~~~-~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~li~~~  215 (257)
                          +||||||+++|+|++|          ..||........ .......... ...  .+.......+++.+.+++.+|
T Consensus       229 ~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  308 (337)
T 3mdy_A          229 SYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTEC  308 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHH
T ss_pred             CccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHh
Confidence                9999999999999999          777766543321 1111111111 101  111111135677899999999


Q ss_pred             hcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         216 RGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       216 l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |+.||++||+++++++.|+++.+..+
T Consensus       309 l~~dP~~Rps~~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          309 WAHNPASRLTALRVKKTLAKMSESQD  334 (337)
T ss_dssp             SCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             hhhChhhCCCHHHHHHHHHHHHhhcc
Confidence            99999999999999999999998765

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=3.5e-38  Score=256.55  Aligned_cols=211  Identities=21%  Similarity=0.307  Sum_probs=166.4

Q ss_pred             ccccHHHHHHHHHhcC-CCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHG-APGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~-~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++.++.+ ||||+++++++......+++||+.+++|.+++.. ...+++..+..++.|++.||.+||+.|+
T Consensus        70 ~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i  148 (313)
T 3cek_A           70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK-KKSIDPWERKSYWKNMLEAVHTIHQHGI  148 (313)
T ss_dssp             HHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHH-CSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            4678999999999984 6999999999999999999999669999999985 5679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-----------CCCCCcchHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-----------LDQSPRDDLE  157 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~Dv~  157 (257)
                      +|+||+|+||+++.    +.++|+|||++.......... ......+++.|+|||.+.+           ..++.++|||
T Consensus       149 vH~dlkp~NIl~~~----~~~kL~Dfg~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~  223 (313)
T 3cek_A          149 VHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSV-VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW  223 (313)
T ss_dssp             CCCCCCGGGEEEET----TEEEECCCSSSCC---------------CCGGGCCHHHHTTCC----------CCCHHHHHH
T ss_pred             eecCCCcccEEEEC----CeEEEeeccccccccCccccc-cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHH
Confidence            99999999999952    789999999987654432211 1134568999999999976           3577899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |||+++|+|++|..||......  ...+..+.   ........+...++.+.+++.+||+.||++||+++++++
T Consensus       224 slG~il~el~~g~~pf~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          224 SLGCILYYMTYGKTPFQQIINQ--ISKLHAII---DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHHHHHHHHHHSSCTTTTCCSH--HHHHHHHH---CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCCchhhHHHH--HHHHHHHH---hcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            9999999999999999875432  12222221   111222233566889999999999999999999999976

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=3e-39  Score=258.56  Aligned_cols=210  Identities=21%  Similarity=0.280  Sum_probs=170.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeee--eCCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGT--SGDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~--~~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..+.+.+|+.++++++ ||||+++++++.  .....++||||+ +++|.+++...   ...+++..+..++.|++.||.+
T Consensus        48 ~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~  126 (279)
T 2w5a_A           48 EKQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE  126 (279)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence            3457889999999997 999999999874  456789999999 88999999864   3459999999999999999999


Q ss_pred             HHhCC-----ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          83 VHRKK-----IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        83 lh~~~-----i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      ||+.|     ++|+||+|+||+++.+   +.++|+|||.+........   ......+++.|+|||.+.+..++.++|||
T Consensus       127 lH~~~~~~~~ivH~dl~p~NIl~~~~---~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  200 (279)
T 2w5a_A          127 CHRRSDGGHTVLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDTS---FAKTFVGTPYYMSPEQMNRMSYNEKSDIW  200 (279)
T ss_dssp             HHHHC------CCCCCSGGGEEECSS---SCEEECCCCHHHHC---CH---HHHHHHSCCTTCCHHHHHCC-CCHHHHHH
T ss_pred             HhcccCCCCeeEEeccchhhEEEcCC---CCEEEecCchheeeccccc---cccccCCCccccChHHhccCCCCchhhHH
Confidence            99999     9999999999999766   8899999999876533211   11234688999999999998899999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS  232 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~  232 (257)
                      |||+++|+|++|..||....   .......+.....    +.....+|+.+.++|.+||+.||++||+++++++.
T Consensus       201 slG~il~~l~~g~~p~~~~~---~~~~~~~i~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  268 (279)
T 2w5a_A          201 SLGCLLYELCALMPPFTAFS---QKELAGKIREGKF----RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  268 (279)
T ss_dssp             HHHHHHHHHHHSSCSSCCSS---HHHHHHHHHHTCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHHHHCCCCCcccC---HHHHHHHHhhccc----ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence            99999999999999998753   2233333333222    22335789999999999999999999999998864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.2e-38  Score=263.41  Aligned_cols=216  Identities=13%  Similarity=0.143  Sum_probs=169.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeC-----CccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSG-----DYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~-----~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ..++.+|+.+++.+. ||||+++++++...     ...+++||+++++|.+++..  ..+++..+..++.|++.||.+||
T Consensus        53 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH  129 (353)
T 2b9h_A           53 ALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLH  129 (353)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEECCCSCSTTCCCEEEEECCCSEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCc-CCCcCCeeeeecccccCccceEEEEEeccCccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHH
Confidence            456789999999998 99999999987654     57899999998899999883  67999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-------CCccCCCCcccccChhHhcC-CCCCCcchH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-------IRTRGLTGTARYASVNAHQW-LDQSPRDDL  156 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv  156 (257)
                      +.|++|+||||+||+++.+   +.++|+|||++..........       .......|++.|+|||++.+ ..++.++||
T Consensus       130 ~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  206 (353)
T 2b9h_A          130 GSNVIHRDLKPSNLLINSN---CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV  206 (353)
T ss_dssp             HTTEECSCCCGGGEEECTT---CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHH
T ss_pred             HCCeecCCCCHHHeEEcCC---CcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhH
Confidence            9999999999999999766   889999999998765432111       01134578999999998765 668899999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHH------------------Hh------hCChhhhhcCCcHHHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEM------------------KL------TMTPEAICEGTPPEFAEFL  212 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------~~------~~~~~~~~~~~~~~~~~li  212 (257)
                      ||||+++|+|++|..||.+.........+......                  ..      ........+.+|+.+.++|
T Consensus       207 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  286 (353)
T 2b9h_A          207 WSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL  286 (353)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHH
Confidence            99999999999999999875432221111111000                  00      0112233457899999999


Q ss_pred             HHHhcCCCCCCCChHHHHH
Q psy2769         213 RYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       213 ~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .+||+.||++|||++++++
T Consensus       287 ~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          287 QRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             HHHSCSSGGGSCCHHHHHT
T ss_pred             HHhcCcCcccCCCHHHHhc
Confidence            9999999999999999876

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=7.3e-39  Score=263.06  Aligned_cols=214  Identities=18%  Similarity=0.225  Sum_probs=149.1

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ...+|+....++.+||||+++++++..    ....++||||+ +++|.+++... ...+++..+..++.|++.||.|||+
T Consensus        67 ~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~  146 (336)
T 3fhr_A           67 KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS  146 (336)
T ss_dssp             HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            345666666666669999999999876    44589999999 88999999854 3469999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .|++|+||||+||+++.++..+.++|+|||++.......     .....+++.|+|||.+.+..++.++||||||+++|+
T Consensus       147 ~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~  221 (336)
T 3fhr_A          147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA-----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI  221 (336)
T ss_dssp             TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC---------------------------CHHHHHHHHHHHHHHHHH
T ss_pred             CCeecCCCCHHHEEEEecCCCceEEEeccccceeccccc-----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHH
Confidence            999999999999999876555779999999987654321     134567999999999988888999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHH-HHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRM-QRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||............ ..+....... +......+|+.+.++|.+||+.||++|||++++++
T Consensus       222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          222 LLCGFPPFYSNTGQAISPGMKRRIRLGQYGF-PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             HHHSSCCC---------------------CC-CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHCCCCCCCccchhhhhhHHHhhhcccccc-CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            99999999875443321111 1122222222 22233578999999999999999999999999987

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.4e-37  Score=255.24  Aligned_cols=212  Identities=17%  Similarity=0.174  Sum_probs=170.0

Q ss_pred             ccccHHHHHHHHHhcCCC------CCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAP------GVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~------~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      .+.+.+|+.++..+. |+      +++++++++...+..++|||+++++|.+++.... ..+++..+..++.|++.||.|
T Consensus        55 ~~~~~~e~~~l~~l~-~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~  133 (339)
T 1z57_A           55 CEAARSEIQVLEHLN-TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF  133 (339)
T ss_dssp             HHHHHHHHHHHHHHH-HHCTTCTTCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhh-hcCCCCceeeEeeecccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHH
Confidence            467889999999997 44      5999999999999999999999999999998643 368999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCC----------------CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVREN----------------FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ  146 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~----------------~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~  146 (257)
                      ||+.|++|+||||+||+++.+..                .+.++|+|||++......      .....+++.|+|||.+.
T Consensus       134 lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------~~~~~gt~~y~aPE~~~  207 (339)
T 1z57_A          134 LHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH------HSTLVSTRHYRAPEVIL  207 (339)
T ss_dssp             HHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC------CCSSCSCGGGCCHHHHT
T ss_pred             HHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc------cccccCCccccChHHhh
Confidence            99999999999999999976321                367999999998764332      14557899999999999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhh---------------------------
Q psy2769         147 WLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEA---------------------------  199 (257)
Q Consensus       147 ~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------  199 (257)
                      +..++.++||||||+++|+|++|..||.........   ..+.....+.+...                           
T Consensus       208 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (339)
T 1z57_A          208 ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL---AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYV  284 (339)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH---HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHH
T ss_pred             CCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchh
Confidence            999999999999999999999999999875333222   22222111111100                           


Q ss_pred             ------------hhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         200 ------------ICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       200 ------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                                  .....++.+.++|.+||+.||++|||++++++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          285 SRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                        00123567999999999999999999999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.7e-39  Score=261.71  Aligned_cols=217  Identities=18%  Similarity=0.251  Sum_probs=161.6

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-------cCCCCHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-------SKRFSLKTVLMLADQMISR   79 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-------~~~~~~~~~~~~~~~i~~~   79 (257)
                      ...+.+.+|+.++.++. ||||+++++++...+..++||||+ +++|.+++...       ...+++..+..++.|++.|
T Consensus        55 ~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  133 (303)
T 2vwi_A           55 TSMDELLKEIQAMSQCH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG  133 (303)
T ss_dssp             -----------CCCCCC-CTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhcC-CCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHH
Confidence            34567889999999997 999999999999999999999999 99999999852       3458999999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC--CCCccCCCCcccccChhHhcC-CCCCCcchH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP--RIRTRGLTGTARYASVNAHQW-LDQSPRDDL  156 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv  156 (257)
                      |.+||+.|++|+||+|+||+++.+   +.++|+|||.+.........  ........+++.|+|||.+.+ ..++.++||
T Consensus       134 l~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  210 (303)
T 2vwi_A          134 LEYLHKNGQIHRDVKAGNILLGED---GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI  210 (303)
T ss_dssp             HHHHHHTTCCCCCCSGGGEEECTT---CCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHH
T ss_pred             HHHHHhCCCCCCCCChhhEEEcCC---CCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhH
Confidence            999999999999999999999766   88999999998765432211  111134568999999999875 467899999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh-----CChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT-----MTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||||+++|+|++|..||..........   ........     .........+++.+.+++.+||+.||++||++.++++
T Consensus       211 ~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          211 WSFGITAIELATGAAPYHKYPPMKVLM---LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCGGGHHH---HHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCccCchhhHHH---HHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            999999999999999998765433221   11111100     0112223568899999999999999999999999876

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.3e-38  Score=266.88  Aligned_cols=217  Identities=18%  Similarity=0.210  Sum_probs=170.2

Q ss_pred             cccccHHHHHHHHHhcC-------CCCCcEEEeeee----eCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHG-------APGVPHVMGYGT----SGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQM   76 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~-------~~~i~~~~~~~~----~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i   76 (257)
                      ..+.+.+|+.+++.+.+       ||||+++++++.    .....|+|||+++++|.+.+... ...+++..+..++.|+
T Consensus        76 ~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi  155 (397)
T 1wak_A           76 YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQV  155 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHH
Confidence            35678899999999972       788999999987    45679999999988888877754 3579999999999999


Q ss_pred             HHHHHHHHhC-CccccCCCCCceEeeccC----------------------------------------------CCCeE
Q psy2769          77 ISRLEHVHRK-KIVHRDIKPDNFLMGVRE----------------------------------------------NFNTV  109 (257)
Q Consensus        77 ~~~l~~lh~~-~i~H~dl~~~nili~~~~----------------------------------------------~~~~~  109 (257)
                      +.||.|||++ ||+||||||+||+++.++                                              ....+
T Consensus       156 ~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (397)
T 1wak_A          156 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV  235 (397)
T ss_dssp             HHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCE
T ss_pred             HHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccce
Confidence            9999999998 999999999999998552                                              11379


Q ss_pred             EEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCcc---HHHHHH
Q psy2769         110 YLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDN---EETRMQ  186 (257)
Q Consensus       110 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~---~~~~~~  186 (257)
                      +|+|||.+......      .....+|+.|+|||++.+..++.++||||||+++|+|++|..||.......   ....+.
T Consensus       236 kl~DfG~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~  309 (397)
T 1wak_A          236 KIADLGNACWVHKH------FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIA  309 (397)
T ss_dssp             EECCGGGCEETTBC------SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHH
T ss_pred             Eecccccccccccc------CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHH
Confidence            99999999875432      144578999999999999999999999999999999999999998754332   222222


Q ss_pred             HHHHHHhhCChhh-------------------------------------hhcCCcHHHHHHHHHHhcCCCCCCCChHHH
Q psy2769         187 RVTEMKLTMTPEA-------------------------------------ICEGTPPEFAEFLRYCRGLAFSEEPNYGKL  229 (257)
Q Consensus       187 ~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  229 (257)
                      .+.......+...                                     .....++.+.++|.+||+.||++|||++++
T Consensus       310 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~  389 (397)
T 1wak_A          310 LIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC  389 (397)
T ss_dssp             HHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHH
T ss_pred             HHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHH
Confidence            2222211111100                                     012234678899999999999999999998


Q ss_pred             HH
Q psy2769         230 RD  231 (257)
Q Consensus       230 ~~  231 (257)
                      ++
T Consensus       390 l~  391 (397)
T 1wak_A          390 LR  391 (397)
T ss_dssp             HT
T ss_pred             hh
Confidence            75

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=7.9e-39  Score=270.82  Aligned_cols=219  Identities=16%  Similarity=0.180  Sum_probs=164.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+.+|+.+++.+.+||||+++++++.+....|+|||+++++|.+++.......+...+..++.|++.||.|||+.|
T Consensus        59 ~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  138 (432)
T 3p23_A           59 ECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN  138 (432)
T ss_dssp             TTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc
Confidence            34456889999999996699999999999999999999999988999999865555666677899999999999999999


Q ss_pred             ccccCCCCCceEeeccC--CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC---CCCCCcchHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRE--NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW---LDQSPRDDLEALCYT  162 (257)
Q Consensus        88 i~H~dl~~~nili~~~~--~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~---~~~~~~~Dv~slg~~  162 (257)
                      |+||||||+||+++.++  ....++|+|||++.................||+.|+|||++.+   ..++.++|||||||+
T Consensus       139 ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~i  218 (432)
T 3p23_A          139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV  218 (432)
T ss_dssp             CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHH
T ss_pred             CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHH
Confidence            99999999999996432  2246889999999876543322222245679999999999974   456789999999999


Q ss_pred             HHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         163 LVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       163 l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|+|++ |..||.........     .................+..+.++|.+||+.||++||+++++++
T Consensus       219 l~ellt~g~~pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          219 FYYVISEGSHPFGKSLQRQAN-----ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             HHHHHTTSCBTTBSTTTHHHH-----HHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHcCCCCCcchhhHHHHH-----HHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            999999 99999753222111     11111111111111223556899999999999999999999983

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.2e-37  Score=262.97  Aligned_cols=211  Identities=18%  Similarity=0.140  Sum_probs=166.5

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeC------CccEEEEeccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSG------DYNILVMELLGPSLEDLFQYC---SKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~------~~~~~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ....+|+.+++.+. ||||+++++++...      ...++||||+.+++.+.+...   ...+++..+..++.|++.||.
T Consensus        92 ~~~~~E~~il~~l~-hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~  170 (420)
T 1j1b_A           92 RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA  170 (420)
T ss_dssp             TSCCHHHHHHHTCC-CTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHcC-CCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence            34568999999998 99999999988532      246799999977888777642   567999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALC  160 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg  160 (257)
                      |||+.||+||||||+||+++.+  .+.+||+|||++........    .....+++.|+|||++.+. .++.++||||||
T Consensus       171 ~LH~~~ivHrDlkp~NILl~~~--~~~~kl~DFG~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  244 (420)
T 1j1b_A          171 YIHSFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEP----NVSYICSRYYRAPELIFGATDYTSSIDVWSAG  244 (420)
T ss_dssp             HHHTTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECCTTCC----CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             HHHHCCccccCCChhhEEEeCC--CCeEEeccchhhhhcccCCC----ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHH
Confidence            9999999999999999999853  25789999999987644321    1456789999999999765 689999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC-----------------------hh-hhhcCCcHHHHHHHHHHh
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-----------------------PE-AICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~-~~~~~~~~~~~~li~~~l  216 (257)
                      |++|||++|+.||.+....   ..+..+........                       +. .+...+++.+.+||.+||
T Consensus       245 ~il~ell~G~~pf~~~~~~---~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L  321 (420)
T 1j1b_A          245 CVLAELLLGQPIFPGDSGV---DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL  321 (420)
T ss_dssp             HHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhc
Confidence            9999999999999874332   22222222110000                       00 112457889999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++||++.++++
T Consensus       322 ~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          322 EYTPTARLTPLEACA  336 (420)
T ss_dssp             CSSGGGSCCHHHHHT
T ss_pred             cCChhHCCCHHHHhC
Confidence            999999999999875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=3e-38  Score=262.73  Aligned_cols=206  Identities=18%  Similarity=0.253  Sum_probs=165.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCcc------EEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYN------ILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~------~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+++.+|+.+++.++ ||||+++++++......      ++|||+++++|.+.+.   ..+++..+..++.|++.||.||
T Consensus        85 ~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~L  160 (371)
T 4exu_A           85 AKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG---MEFSEEKIQYLVYQMLKGLKYI  160 (371)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSSTTCCCCEEEEECCCEEHHHHTT---SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCchhhhhheeccCCcccceeEEEEEccccccHHHHhh---cCCCHHHHHHHHHHHHHHHHHH
Confidence            457889999999998 99999999999876654      9999999888877764   4599999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      |+.|++|+||||+||+++.+   +.++|+|||++......      .....+++.|+|||.+.+ ..++.++||||||++
T Consensus       161 H~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i  231 (371)
T 4exu_A          161 HSAGVVHRDLKPGNLAVNED---CELKILDFGLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCI  231 (371)
T ss_dssp             HHTTCCCSCCCGGGEEECTT---CCEEECSTTCC--------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHH
T ss_pred             HHCCCcCCCcCHHHeEECCC---CCEEEEecCcccccccC------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHH
Confidence            99999999999999999866   88999999998754332      144578999999999987 678999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh--------------------------CChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT--------------------------MTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|+|++|..||.+....   ..+..+......                          .........+++.+.++|.+||
T Consensus       232 l~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  308 (371)
T 4exu_A          232 MAEMLTGKTLFKGKDYL---DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML  308 (371)
T ss_dssp             HHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHS
T ss_pred             HHHHHhCCCCCCCCChH---HHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHC
Confidence            99999999999874332   222222221100                          0112233567899999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      +.||++|||++++++
T Consensus       309 ~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          309 ELDVDKRLTAAQALT  323 (371)
T ss_dssp             CSCTTTSCCHHHHHT
T ss_pred             CCChhhcCCHHHHhc
Confidence            999999999999876

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.3e-37  Score=259.95  Aligned_cols=161  Identities=21%  Similarity=0.228  Sum_probs=140.8

Q ss_pred             ccccHHHHHHHHHhcCCCC-----CcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPG-----VPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~-----i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...+..|+.++..+..|++     |+++++++......|+|||+++++|.+++.... ..+++..+..++.|++.||.||
T Consensus        94 ~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~l  173 (382)
T 2vx3_A           94 LNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL  173 (382)
T ss_dssp             HHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHh
Confidence            4567789999999976664     999999999999999999999889999998653 5699999999999999999999


Q ss_pred             H--hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHH
Q psy2769          84 H--RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY  161 (257)
Q Consensus        84 h--~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~  161 (257)
                      |  +.||+||||||+||+++.+ ..+.+||+|||++......      .....+++.|+|||++.+..++.++||||||+
T Consensus       174 H~~~~~ivHrDlkp~NIll~~~-~~~~~kL~DFG~a~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~  246 (382)
T 2vx3_A          174 ATPELSIIHCDLKPENILLCNP-KRSAIKIVDFGSSCQLGQR------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGC  246 (382)
T ss_dssp             TSTTTCEECCCCSGGGEEESST-TSCCEEECCCTTCEETTCC------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHH
T ss_pred             ccCCCCEEcCCCCcccEEEecC-CCCcEEEEeccCceecccc------cccccCCccccChHHHcCCCCCcHHHHHHHHH
Confidence            9  5799999999999999643 2378999999999876432      14567899999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCC
Q psy2769         162 TLVYFLRGKLPWQSIK  177 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~  177 (257)
                      ++|+|++|..||.+..
T Consensus       247 il~elltg~~pf~~~~  262 (382)
T 2vx3_A          247 ILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             HHHHHHHSSCSSCCSS
T ss_pred             HHHHHHhCCCCCCCCC
Confidence            9999999999999743

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=5.6e-38  Score=260.61  Aligned_cols=220  Identities=18%  Similarity=0.159  Sum_probs=178.3

Q ss_pred             cccccHHHHHHHHHhcC--CCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHG--APGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC----SKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~--~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ....+..|+.++..+..  |++|+.+++++...+..++||||+ +++|.+++...    ...+++..+..++.|++.||.
T Consensus       107 ~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~  186 (365)
T 3e7e_A          107 NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIE  186 (365)
T ss_dssp             CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHH
Confidence            44578889999998864  799999999999999999999999 99999999853    457999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeec--------cCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCc
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGV--------RENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPR  153 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~--------~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  153 (257)
                      |||+.||+||||||+||+++.        +...+.+||+|||++........ ........||+.|+|||++.+..++.+
T Consensus       187 ~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~  265 (365)
T 3e7e_A          187 QVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK-GTIFTAKCETSGFQCVEMLSNKPWNYQ  265 (365)
T ss_dssp             HHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT-TEEECCSSCTTSCCCHHHHTTCCBSTH
T ss_pred             HHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC-CceeeeecCCCCCCChHHhcCCCCCcc
Confidence            999999999999999999986        11248899999999976543221 112245679999999999999999999


Q ss_pred             chHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-ChHHHHHH
Q psy2769         154 DDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-NYGKLRDS  232 (257)
Q Consensus       154 ~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~~~~~  232 (257)
                      +||||||+++|+|++|+.||........          ........  ...++.+.+++..|++.+|.+|+ +++++.+.
T Consensus       266 ~DiwslG~il~elltg~~pf~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~  333 (365)
T 3e7e_A          266 IDYFGVAATVYCMLFGTYMKVKNEGGEC----------KPEGLFRR--LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK  333 (365)
T ss_dssp             HHHHHHHHHHHHHHHSSCCCEEEETTEE----------EECSCCTT--CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCCccccCCCCce----------eechhccc--cCcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence            9999999999999999999976432210          00000000  23467799999999999999995 78999999


Q ss_pred             HHHHHHhcc
Q psy2769         233 FRNLLENKE  241 (257)
Q Consensus       233 l~~~~~~~~  241 (257)
                      |++++.+..
T Consensus       334 l~~~l~~~~  342 (365)
T 3e7e_A          334 LKKVFQQHY  342 (365)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhh
Confidence            999988653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.1e-38  Score=255.03  Aligned_cols=211  Identities=21%  Similarity=0.324  Sum_probs=157.1

Q ss_pred             cHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-Cc
Q psy2769          13 LFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHVHRK-KI   88 (257)
Q Consensus        13 ~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~~-~i   88 (257)
                      ...|...+.+..+||||+++++++...+..++||||++++|.+++...   ...+++..+..++.|++.||.+||+. |+
T Consensus        52 ~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i  131 (290)
T 3fme_A           52 LLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV  131 (290)
T ss_dssp             HHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence            334444433434599999999999999999999999977998887652   56799999999999999999999998 99


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh----cCCCCCCcchHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH----QWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~~Dv~slg~~l~  164 (257)
                      +|+||||+||+++.+   +.++|+|||++........    .....+++.|+|||.+    .+..++.++||||+|+++|
T Consensus       132 ~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  204 (290)
T 3fme_A          132 IHRDVKPSNVLINAL---GQVKMCDFGISGYLVDDVA----KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI  204 (290)
T ss_dssp             CCCCCSGGGCEECTT---CCEEBCCC-------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEECCC---CCEEEeecCCccccccccc----ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHH
Confidence            999999999999766   8999999999876544321    1334689999999996    4556788999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRN  235 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~  235 (257)
                      +|++|..||.....  ....+........   .......+|+.+.+++.+||+.||++|||++++++  .+..
T Consensus       205 ~l~~g~~p~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          205 ELAILRFPYDSWGT--PFQQLKQVVEEPS---PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             HHHHTSCSSCCCSC--HHHHHHHHHHSCC---CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHCCCCccccCc--hHHHHHHHhccCC---CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence            99999999986432  2222222222211   11112468999999999999999999999999977  4443

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=2.6e-38  Score=260.19  Aligned_cols=227  Identities=21%  Similarity=0.240  Sum_probs=176.4

Q ss_pred             ccccHHHHHHHHHh-cCCCCCcEEEeeeeeCC----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKL-HGAPGVPHVMGYGTSGD----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l-~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...+.+|.+++..+ .+||||+++++++....    ..++||||+ +++|.+++.  ...+++..+..++.|++.||.+|
T Consensus        78 ~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~i~~~i~~~l~~l  155 (342)
T 1b6c_B           78 ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN--RYTVTVEGMIKLALSTASGLAHL  155 (342)
T ss_dssp             HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHH--HCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHh--ccCccHHHHHHHHHHHHHHHHHH
Confidence            45678899999984 24999999999998765    789999999 889999998  35799999999999999999999


Q ss_pred             H--------hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCCCC----
Q psy2769          84 H--------RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWLDQ----  150 (257)
Q Consensus        84 h--------~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~----  150 (257)
                      |        +.|++|+||||+||+++.+   +.++|+|||++.......... .......+++.|+|||.+.+...    
T Consensus       156 H~~~~~~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  232 (342)
T 1b6c_B          156 HMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF  232 (342)
T ss_dssp             HCCBCSTTCBCEEECSCCSGGGEEECTT---SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCH
T ss_pred             HHHHhhhcccCCeeeCCCCHHHEEECCC---CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhccccccccc
Confidence            9        8999999999999999866   889999999987665432111 01144578999999999987632    


Q ss_pred             --CCcchHHHHHHHHHHHHhC----------CCCCCCCCCcc--HHHHHHHHHHHHhhCChhhh--hcCCcHHHHHHHHH
Q psy2769         151 --SPRDDLEALCYTLVYFLRG----------KLPWQSIKSDN--EETRMQRVTEMKLTMTPEAI--CEGTPPEFAEFLRY  214 (257)
Q Consensus       151 --~~~~Dv~slg~~l~~l~~g----------~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~  214 (257)
                        +.++||||||+++|+|++|          ..||.......  .......+.........+..  ...+++.+.+++.+
T Consensus       233 ~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  312 (342)
T 1b6c_B          233 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRE  312 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHH
T ss_pred             ccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHH
Confidence              3689999999999999999          78887754322  22222222111111111110  12345679999999


Q ss_pred             HhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         215 CRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       215 ~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      ||+.||++||++.++++.|+++.++.+
T Consensus       313 cl~~dp~~Rps~~~i~~~L~~i~~~~~  339 (342)
T 1b6c_B          313 CWYANGAARLTALRIKKTLSQLSQQEG  339 (342)
T ss_dssp             HCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred             HhccChhhCCCHHHHHHHHHHHHHHhc
Confidence            999999999999999999999988765

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=1.8e-37  Score=256.18  Aligned_cols=213  Identities=15%  Similarity=0.160  Sum_probs=168.4

Q ss_pred             cccccHHHHHHHHHhcCCCC------CcEEEeeeeeCCccEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPG------VPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS-KRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~------i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~   81 (257)
                      ..+.+.+|+.+++.+. |++      ++.+++++...+..++|||++++++.+.+.... ..+++..+..++.|++.||.
T Consensus        59 ~~~~~~~E~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~  137 (355)
T 2eu9_A           59 YREAARLEINVLKKIK-EKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR  137 (355)
T ss_dssp             HHHHHHHHHHHHHHHH-HHCTTSCSCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHh-hcCCCCceeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            3457888999999998 544      899999999999999999999888888887543 57999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeecc----------------CCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVR----------------ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH  145 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~----------------~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  145 (257)
                      |||+.|++|+||||+||++..+                ...+.++|+|||++.......      ....+++.|+|||++
T Consensus       138 ~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~~gt~~y~aPE~~  211 (355)
T 2eu9_A          138 FLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH------TTIVATRHYRPPEVI  211 (355)
T ss_dssp             HHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCC------CSSCSCGGGCCHHHH
T ss_pred             HHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccccc------cCCcCCCcccCCeee
Confidence            9999999999999999999432                133789999999997643321      445789999999999


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhh-------------------------
Q psy2769         146 QWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAI-------------------------  200 (257)
Q Consensus       146 ~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  200 (257)
                      .+..++.++||||||+++|+|++|..||..........   .+.......+....                         
T Consensus       212 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (355)
T 2eu9_A          212 LELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV---MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRY  288 (355)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH---HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHH
T ss_pred             ecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCcHHHhhhccchhhhcccccccccccchhcc
Confidence            99999999999999999999999999998754332222   22221111110000                         


Q ss_pred             --------------hcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         201 --------------CEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       201 --------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                                    ....+..+.++|.+||+.||++|||++++++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          289 VKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                          0112457899999999999999999999874

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=3.4e-37  Score=255.33  Aligned_cols=220  Identities=17%  Similarity=0.138  Sum_probs=169.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-------ccEEEEeccCCCHHHHHHH---hcCCCCHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-------YNILVMELLGPSLEDLFQY---CSKRFSLKTVLMLADQMI   77 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-------~~~~v~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~   77 (257)
                      ....+..+|+..+..+. ||||+++++++....       ..++||||++++|.+.+..   ....+++..+..++.|++
T Consensus        61 ~~~~~~~~~~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~  139 (360)
T 3e3p_A           61 RFRNRELQIMQDLAVLH-HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI  139 (360)
T ss_dssp             TCCCHHHHHHHHHHHHC-CTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhcC-CCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHH
Confidence            34556778888888887 999999999986533       2789999997777766654   256789999999999999


Q ss_pred             HHHHHHH--hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcc
Q psy2769          78 SRLEHVH--RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRD  154 (257)
Q Consensus        78 ~~l~~lh--~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~  154 (257)
                      .||.+||  +.|++|+||||+||+++.  .++.++|+|||++........    .....+++.|+|||++.+.. ++.++
T Consensus       140 ~al~~lH~~~~~ivH~Dlkp~NIll~~--~~~~~kl~Dfg~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~  213 (360)
T 3e3p_A          140 RSIGCLHLPSVNVCHRDIKPHNVLVNE--ADGTLKLCDFGSAKKLSPSEP----NVAYICSRYYRAPELIFGNQHYTTAV  213 (360)
T ss_dssp             HHHHHHTSTTTCCBCSCCCGGGEEEET--TTTEEEECCCTTCBCCCTTSC----CCSTTSCGGGCCHHHHTTCSSCCTHH
T ss_pred             HHHHHHhCCCCCeecCcCCHHHEEEeC--CCCcEEEeeCCCceecCCCCC----cccccCCcceeCHHHHcCCCCCCcHH
Confidence            9999999  999999999999999985  128999999999976544321    14557899999999997654 79999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC-----------------------hhhh----hcCCcHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-----------------------PEAI----CEGTPPE  207 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~----~~~~~~~  207 (257)
                      ||||||+++|+|++|..||......   ..+..+........                       ....    ....++.
T Consensus       214 Di~slG~il~ell~g~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (360)
T 3e3p_A          214 DIWSVGCIFAEMMLGEPIFRGDNSA---GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKE  290 (360)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCCCChH---HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHH
Confidence            9999999999999999999884332   22333322111100                       0111    1125788


Q ss_pred             HHHHHHHHhcCCCCCCCChHHHHH--HHHHHH
Q psy2769         208 FAEFLRYCRGLAFSEEPNYGKLRD--SFRNLL  237 (257)
Q Consensus       208 ~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~  237 (257)
                      +.++|.+||+.||.+|||+.++++  .+++..
T Consensus       291 ~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          291 AYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             HHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence            999999999999999999999976  344443

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=3.4e-39  Score=262.88  Aligned_cols=224  Identities=16%  Similarity=0.211  Sum_probs=174.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ..+.+.+|+.++..+. ||||+++++++..    ....++||||+ +++|.+++...   ...+++..+..++.|++.||
T Consensus        69 ~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L  147 (317)
T 2buj_A           69 DREEAQREADMHRLFN-HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGL  147 (317)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcC-CCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            4567889999999997 9999999999862    34789999999 88999999863   56799999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC------CccCCCCcccccChhHhcCCC---CC
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI------RTRGLTGTARYASVNAHQWLD---QS  151 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~---~~  151 (257)
                      .+||+.|++|+||+|+||+++.+   +.++|+|||.+...........      ......+++.|+|||.+.+..   ++
T Consensus       148 ~~LH~~~ivH~dlkp~NIl~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  224 (317)
T 2buj_A          148 EAIHAKGYAHRDLKPTNILLGDE---GQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID  224 (317)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTT---SCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEEC
T ss_pred             HHHHhCCcccCCCCHHHEEEcCC---CCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCC
Confidence            99999999999999999999766   8899999998765432110000      001234688999999987654   58


Q ss_pred             CcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         152 PRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .++||||||+++|+|++|..||.........  ...........   .....+|+.+.++|.+||+.||.+||+++++++
T Consensus       225 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  299 (317)
T 2buj_A          225 ERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS--VALAVQNQLSI---PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLS  299 (317)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTHHHHHTTSC--HHHHHHCC--C---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCChhhhhcccch--hhHHhhccCCC---CccccCCHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            8999999999999999999999652211100  01111111111   112568899999999999999999999999999


Q ss_pred             HHHHHHHhcc
Q psy2769         232 SFRNLLENKE  241 (257)
Q Consensus       232 ~l~~~~~~~~  241 (257)
                      .|+++.....
T Consensus       300 ~L~~~~~~~~  309 (317)
T 2buj_A          300 QLEALQPPAP  309 (317)
T ss_dssp             HHHHTCCCCC
T ss_pred             HhhhcCCCCC
Confidence            9998765443

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.5e-39  Score=271.17  Aligned_cols=208  Identities=14%  Similarity=0.103  Sum_probs=161.4

Q ss_pred             CcccccHHHHHHHHHhc--CCCCCcEEE-------eeeeeCC-----------------ccEEEEeccCCCHHHHHHHhc
Q psy2769           8 NPVQRLFWERNFYEKLH--GAPGVPHVM-------GYGTSGD-----------------YNILVMELLGPSLEDLFQYCS   61 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~--~~~~i~~~~-------~~~~~~~-----------------~~~~v~e~~~~~L~~~~~~~~   61 (257)
                      ...+.+.+|+.++..+.  +||||++++       +++...+                 ..|++|||++|+|.+++... 
T Consensus       115 ~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~-  193 (377)
T 3byv_A          115 NAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL-  193 (377)
T ss_dssp             THHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhc-
Confidence            34567889996555554  499999988       5555442                 37899999988999999864 


Q ss_pred             CCCC-------HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCC
Q psy2769          62 KRFS-------LKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLT  134 (257)
Q Consensus        62 ~~~~-------~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  134 (257)
                      ..++       +..+..++.|++.||.|||+.||+||||||+||+++.+   +.+||+|||++.....      ......
T Consensus       194 ~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~---~~~kL~DFG~a~~~~~------~~~~~~  264 (377)
T 3byv_A          194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR---GGVFLTGFEHLVRDGA------RVVSSV  264 (377)
T ss_dssp             HHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCGGGCEETTC------EEECCC
T ss_pred             cccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC---CCEEEEechhheecCC------cccCCC
Confidence            2233       47888899999999999999999999999999999866   8999999999875322      114456


Q ss_pred             CcccccChhHhcCC-----------CCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcC
Q psy2769         135 GTARYASVNAHQWL-----------DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEG  203 (257)
Q Consensus       135 ~~~~~~aPE~~~~~-----------~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (257)
                      | +.|+|||++.+.           .++.++||||||+++|+|++|..||..........            ........
T Consensus       265 g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~------------~~~~~~~~  331 (377)
T 3byv_A          265 S-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSE------------WIFRSCKN  331 (377)
T ss_dssp             C-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSG------------GGGSSCCC
T ss_pred             C-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchh------------hhhhhccC
Confidence            7 999999999887           78999999999999999999999997643221100            01111257


Q ss_pred             CcHHHHHHHHHHhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         204 TPPEFAEFLRYCRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       204 ~~~~~~~li~~~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      +|+.+.++|.+||+.||++||++.++++  .++++..
T Consensus       332 ~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~  368 (377)
T 3byv_A          332 IPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT  368 (377)
T ss_dssp             CCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHH
Confidence            8999999999999999999999999986  5554433

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2e-37  Score=256.14  Aligned_cols=206  Identities=18%  Similarity=0.255  Sum_probs=164.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCc------cEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDY------NILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~------~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+++.+|+.+++.+. ||||+++++++.....      .+++||+++++|.+++.   ..+++..+..++.|++.||.+|
T Consensus        67 ~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~i~~qi~~al~~L  142 (353)
T 3coi_A           67 AKRAYRELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMG---LKFSEEKIQYLVYQMLKGLKYI  142 (353)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSGGGCCCCEEEEECCSEEGGGTTT---SCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCcccHhheEecccccccceeEEEEeccccCCHHHHhc---CCCCHHHHHHHHHHHHHHHHHH
Confidence            456889999999998 9999999999987654      49999999878877664   4599999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~  162 (257)
                      |+.|++|+||+|+||+++.+   +.++|+|||++......      .....+++.|+|||.+.+ ..++.++||||||++
T Consensus       143 H~~~ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~i  213 (353)
T 3coi_A          143 HSAGVVHRDLKPGNLAVNED---CELKILDFGLARHADAE------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCI  213 (353)
T ss_dssp             HHTTCCCSSCCGGGEEECTT---CCEEECSTTCTTC--------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHH
T ss_pred             HHCCcccCCCCHHHEeECCC---CcEEEeecccccCCCCC------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHH
Confidence            99999999999999999866   88999999998654322      134578999999999987 577899999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh--------------------------CChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT--------------------------MTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|+|++|..||.+....   ..+..+......                          .........+++.+.++|.+||
T Consensus       214 l~el~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  290 (353)
T 3coi_A          214 MAEMLTGKTLFKGKDYL---DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML  290 (353)
T ss_dssp             HHHHHHSSCSSBSSCHH---HHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHS
T ss_pred             HHHHHhCCCCCCCCCHH---HHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHc
Confidence            99999999999875332   222222221100                          0111223467899999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++||+++++++
T Consensus       291 ~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          291 ELDVDKRLTAAQALT  305 (353)
T ss_dssp             CSCTTTSCCHHHHHT
T ss_pred             CCCcccCCCHHHHhc
Confidence            999999999999975

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=3.9e-38  Score=262.12  Aligned_cols=218  Identities=14%  Similarity=0.086  Sum_probs=157.0

Q ss_pred             ccccHHHHHHHHHhc-CCCCCcEEE-------eeeeeC-----------------CccEEEEeccCCCHHHHHHHhcCCC
Q psy2769          10 VQRLFWERNFYEKLH-GAPGVPHVM-------GYGTSG-----------------DYNILVMELLGPSLEDLFQYCSKRF   64 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~-~~~~i~~~~-------~~~~~~-----------------~~~~~v~e~~~~~L~~~~~~~~~~~   64 (257)
                      .+.+.+|+.++..|+ +||||++++       +++...                 ...|+||||++++|.+++...+..+
T Consensus       106 ~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~  185 (371)
T 3q60_A          106 LERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVY  185 (371)
T ss_dssp             HHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhcccc
Confidence            456788877777776 499988865       333322                 2379999999999999999754455


Q ss_pred             CHHHH------HHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCccc
Q psy2769          65 SLKTV------LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTAR  138 (257)
Q Consensus        65 ~~~~~------~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~  138 (257)
                      +...+      ..++.|++.||+|||++||+||||||+||+++.+   +.+||+|||++.......      ....+++.
T Consensus       186 ~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~---~~~kL~DFG~a~~~~~~~------~~~~~t~~  256 (371)
T 3q60_A          186 VFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPD---GRLMLGDVSALWKVGTRG------PASSVPVT  256 (371)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTT---SCEEECCGGGEEETTCEE------EGGGSCGG
T ss_pred             chhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCC---CCEEEEecceeeecCCCc------cCccCCcC
Confidence            55555      6788999999999999999999999999999876   889999999998653221      24556799


Q ss_pred             ccChhHhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH---HHHHHhhCChhhhhcCCcHHHHHHHH
Q psy2769         139 YASVNAHQW--LDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQR---VTEMKLTMTPEAICEGTPPEFAEFLR  213 (257)
Q Consensus       139 ~~aPE~~~~--~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~  213 (257)
                      |+|||++.+  ..++.++||||||+++|+|++|..||.......... ...   ....... ........+|+.+.++|.
T Consensus       257 y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~  334 (371)
T 3q60_A          257 YAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS-WKRPSLRVPGTDS-LAFGSCTPLPDFVKTLIG  334 (371)
T ss_dssp             GCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC-CCBCCTTSCCCCS-CCCTTSSCCCHHHHHHHH
T ss_pred             CcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc-hhhhhhhhccccc-cchhhccCCCHHHHHHHH
Confidence            999999987  678999999999999999999999998763321100 000   0000000 111112478999999999


Q ss_pred             HHhcCCCCCCCChHHHHH--HHHHHHH
Q psy2769         214 YCRGLAFSEEPNYGKLRD--SFRNLLE  238 (257)
Q Consensus       214 ~~l~~~p~~Rp~~~~~~~--~l~~~~~  238 (257)
                      +||+.||++||+++++++  .++++..
T Consensus       335 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~  361 (371)
T 3q60_A          335 RFLNFDRRRRLLPLEAMETPEFLQLQN  361 (371)
T ss_dssp             HHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred             HHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence            999999999999999975  4444443

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.7e-38  Score=259.54  Aligned_cols=223  Identities=19%  Similarity=0.163  Sum_probs=163.7

Q ss_pred             cccHHHHHHHH--HhcCCCCCcEEEeeeee-----CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYE--KLHGAPGVPHVMGYGTS-----GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        11 ~~~~~E~~~~~--~l~~~~~i~~~~~~~~~-----~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      +.+..|..+..  .+. ||||+++++.+..     ....++||||+ +++|.+++..  ...++..+..++.|++.||.|
T Consensus        50 ~~~~~e~~~~~~~~~~-h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~i~~qi~~~L~~  126 (336)
T 3g2f_A           50 QNFINEKNIYRVPLME-HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL--HTSDWVSSCRLAHSVTRGLAY  126 (336)
T ss_dssp             HHHHHHHHHHTSTTCC-CTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhcc-CcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhh--cccchhHHHHHHHHHHHHHHH
Confidence            34455555543  355 9999999985532     33678999999 9999999984  456899999999999999999


Q ss_pred             HHhC---------CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-----CCCccCCCCcccccChhHhcCC
Q psy2769          83 VHRK---------KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-----RIRTRGLTGTARYASVNAHQWL  148 (257)
Q Consensus        83 lh~~---------~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-----~~~~~~~~~~~~~~aPE~~~~~  148 (257)
                      ||+.         |++|+||||+||+++.+   +.+||+|||++.........     ........||+.|+|||++.+.
T Consensus       127 LH~~~~~~~~~~~~ivH~Dikp~Nill~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  203 (336)
T 3g2f_A          127 LHTELPRGDHYKPAISHRDLNSRNVLVKND---GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGA  203 (336)
T ss_dssp             HHCCBCCGGGCBCCEECSSCSGGGEEECTT---SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTC
T ss_pred             HHhhhccccccccceeecccccceEEEcCC---CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCC
Confidence            9999         99999999999999866   89999999999876543211     1111345699999999999873


Q ss_pred             -------CCCCcchHHHHHHHHHHHHhCCCCCCCCCCccH--------------HHHHHHHHHHHhhCChhhhhcC----
Q psy2769         149 -------DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNE--------------ETRMQRVTEMKLTMTPEAICEG----  203 (257)
Q Consensus       149 -------~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~----  203 (257)
                             .++.++||||||+++|+|++|..||........              .........  .....+..+..    
T Consensus       204 ~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  281 (336)
T 3g2f_A          204 VNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVS--REKQRPKFPEAWKEN  281 (336)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHT--TSCCCCCCCTTCCCC
T ss_pred             cccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhc--ccccCCCCCcccccc
Confidence                   456789999999999999999777644322110              001111100  00111111111    


Q ss_pred             --CcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         204 --TPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       204 --~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                        +++.+.++|.+||+.||++|||++++++.|++++....
T Consensus       282 ~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~  321 (336)
T 3g2f_A          282 SLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE  321 (336)
T ss_dssp             SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred             cchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence              34579999999999999999999999999999998654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=2.7e-37  Score=249.72  Aligned_cols=212  Identities=17%  Similarity=0.192  Sum_probs=161.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-------------CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-------------GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQ   75 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-------------~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~   75 (257)
                      .+.+.+|+.+++++. ||||+++++++..             ....++||||+ +++|.+++......++...+..++.|
T Consensus        46 ~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~q  124 (303)
T 1zy4_A           46 LSTILSEVMLLASLN-HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ  124 (303)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-chHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHH
Confidence            457889999999998 9999999998754             35689999999 89999999865667889999999999


Q ss_pred             HHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCC-----------CCCCccCCCCcccccChhH
Q psy2769          76 MISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP-----------PRIRTRGLTGTARYASVNA  144 (257)
Q Consensus        76 i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~-----------~~~~~~~~~~~~~~~aPE~  144 (257)
                      ++.||.+||+.|++|+||+|+||+++.+   +.++|+|||.+........           .........+++.|+|||.
T Consensus       125 i~~~l~~LH~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  201 (303)
T 1zy4_A          125 ILEALSYIHSQGIIHRDLKPMNIFIDES---RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV  201 (303)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTT---SCEEECCCCCCSCTTC-------------------------CTTSCHHH
T ss_pred             HHHHHHHHHhCCeecccCCHHhEEEcCC---CCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCccc
Confidence            9999999999999999999999999766   8899999999876543210           0111134568999999999


Q ss_pred             hcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         145 HQWL-DQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       145 ~~~~-~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      +.+. .++.++||||||+++|+|++   ||...  .+.......+..... ..++......++.+.+++.+||+.||++|
T Consensus       202 ~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~R  275 (303)
T 1zy4_A          202 LDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--MERVNILKKLRSVSI-EFPPDFDDNKMKVEKKIIRLLIDHDPNKR  275 (303)
T ss_dssp             HTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH--HHHHHHHHHHHSTTC-CCCTTCCTTTSHHHHHHHHHHTCSSGGGS
T ss_pred             ccCCCCCcchhhHHHHHHHHHHHHh---ccCCc--hhHHHHHHhcccccc-ccCccccccchHHHHHHHHHHHhcCcccC
Confidence            9865 67899999999999999997   55532  122222222222111 12233445677889999999999999999


Q ss_pred             CChHHHHH
Q psy2769         224 PNYGKLRD  231 (257)
Q Consensus       224 p~~~~~~~  231 (257)
                      ||++++++
T Consensus       276 ps~~~ll~  283 (303)
T 1zy4_A          276 PGARTLLN  283 (303)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHhC
Confidence            99999875

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-37  Score=251.47  Aligned_cols=200  Identities=21%  Similarity=0.291  Sum_probs=163.8

Q ss_pred             cccccHHHHHHHHHhc---CCCCCcEEEeeeeeCCccEEEEec-c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLH---GAPGVPHVMGYGTSGDYNILVMEL-L-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~---~~~~i~~~~~~~~~~~~~~~v~e~-~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ....+.+|+.++.++.   +||||+++++++...+..++|+|+ + +++|.+++.. ...+++..+..++.|++.||.+|
T Consensus        77 ~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~l  155 (312)
T 2iwi_A           77 DSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE-KGPLGEGPSRCFFGQVVAAIQHC  155 (312)
T ss_dssp             --CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Confidence            3457888999999994   499999999999998899999999 6 8999999985 45799999999999999999999


Q ss_pred             HhCCccccCCCCCceEee-ccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMG-VRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCY  161 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~-~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~  161 (257)
                      |+.|++|+||+|+||+++ .+   +.++|+|||++.......     .....++..|+|||.+.+..+ +.++||||||+
T Consensus       156 H~~~i~H~dlkp~Nil~~~~~---~~~kl~dfg~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~  227 (312)
T 2iwi_A          156 HSRGVVHRDIKDENILIDLRR---GCAKLIDFGSGALLHDEP-----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGI  227 (312)
T ss_dssp             HHHTEECCCCSGGGEEEETTT---TEEEECCCSSCEECCSSC-----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHH
T ss_pred             HHCCeeecCCChhhEEEeCCC---CeEEEEEcchhhhcccCc-----ccccCCcccccCceeeecCCCCCccchHHHHHH
Confidence            999999999999999998 44   789999999987764431     144568999999999987665 45899999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|+|++|..||....         .+.....     .....+++.+.++|.+||+.||++||+++++++
T Consensus       228 il~~l~~g~~pf~~~~---------~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          228 LLYDMVCGDIPFERDQ---------EILEAEL-----HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHHHHHHSSCSCCSHH---------HHHHTCC-----CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHCCCCCCChH---------HHhhhcc-----CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999997521         1111111     122678999999999999999999999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=3e-37  Score=251.83  Aligned_cols=200  Identities=20%  Similarity=0.311  Sum_probs=169.2

Q ss_pred             ccccHHHHHHHHHhc-CCCCCcEEEeeeeeCCccEEEEecc-C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLH-GAPGVPHVMGYGTSGDYNILVMELL-G-PSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~-~~~~i~~~~~~~~~~~~~~~v~e~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      .+++.+|+.++.++. +||||+++++++...+..++++|++ + ++|.+++.. ...+++..+..++.|++.||.|||+.
T Consensus        90 ~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~~L~~LH~~  168 (320)
T 3a99_A           90 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC  168 (320)
T ss_dssp             CCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            467889999999998 3799999999999999999999999 4 899999985 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~  165 (257)
                      |++|+||||+||+++.  ..+.++|+|||++.......     .....+++.|+|||.+.+... +.++||||||+++|+
T Consensus       169 ~ivH~Dlkp~NIll~~--~~~~~kL~Dfg~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~e  241 (320)
T 3a99_A          169 GVLHRDIKDENILIDL--NRGELKLIDFGSGALLKDTV-----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  241 (320)
T ss_dssp             TEECCCCSGGGEEEET--TTTEEEECCCTTCEECCSSC-----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             CcEeCCCCHHHEEEeC--CCCCEEEeeCcccccccccc-----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHH
Confidence            9999999999999972  22789999999987764321     134568999999999987665 678999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||....         .+.....     .....+|+.+.++|.+||+.||++||+++++++
T Consensus       242 l~~g~~pf~~~~---------~~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          242 MVCGDIPFEHDE---------EIIRGQV-----FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHSSCSCCSHH---------HHHHCCC-----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHCCCCCCChh---------hhhcccc-----cccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999997521         1111111     122678999999999999999999999999876

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=4.4e-37  Score=250.39  Aligned_cols=207  Identities=21%  Similarity=0.351  Sum_probs=156.7

Q ss_pred             cHHHHH-HHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-Cccc
Q psy2769          13 LFWERN-FYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK-KIVH   90 (257)
Q Consensus        13 ~~~E~~-~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~H   90 (257)
                      +..|.. ++..+ +||||+++++++......++|||++++.+..+.......+++..+..++.|++.||.+||+. |++|
T Consensus        70 ~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H  148 (318)
T 2dyl_A           70 ILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIH  148 (318)
T ss_dssp             HHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             HHHHHHHHHHhc-CCCceeeEEEEEecCCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEe
Confidence            344444 44444 49999999999999999999999998777777765567899999999999999999999995 9999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcchHHHHHHHHHH
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slg~~l~~  165 (257)
                      +||+|+||+++.+   +.++|+|||++........    .....+++.|+|||.+.     +..++.++||||||+++|+
T Consensus       149 ~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~  221 (318)
T 2dyl_A          149 RDVKPSNILLDER---GQIKLCDFGISGRLVDDKA----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE  221 (318)
T ss_dssp             CCCCGGGEEECTT---SCEEECCCTTC------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHH
T ss_pred             CCCCHHHEEECCC---CCEEEEECCCchhccCCcc----ccccCCCccccChhhcccccccccCCccccchhhHHHHHHH
Confidence            9999999999766   8899999999866543221    13456899999999995     4467889999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||.....  ....+..+.....+..  .....+|+.+.+++.+||+.||.+||+++++++
T Consensus       222 l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          222 LATGQFPYKNCKT--DFEVLTKVLQEEPPLL--PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHSSCTTTTCCS--HHHHHHHHHHSCCCCC--CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHhCCCCCCCCCc--cHHHHHHHhccCCCCC--CccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            9999999987432  2233333333222111  112468899999999999999999999999976

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.2e-37  Score=264.04  Aligned_cols=217  Identities=18%  Similarity=0.221  Sum_probs=160.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCC------CCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKR------FSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~------~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.++.++.+||||+++++++.+....++|||+++++|.+++......      .++..+..++.|++.||.||
T Consensus        52 ~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  131 (434)
T 2rio_A           52 CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL  131 (434)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence            345789999999986699999999999999999999999988999999843211      12234578999999999999


Q ss_pred             HhCCccccCCCCCceEeeccC----------CCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcC-----
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRE----------NFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQW-----  147 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~----------~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~-----  147 (257)
                      |+.||+||||||+||+++.++          ....++|+|||++.......... .......||+.|+|||++.+     
T Consensus       132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  211 (434)
T 2rio_A          132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQ  211 (434)
T ss_dssp             HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTS
T ss_pred             HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccc
Confidence            999999999999999997641          33589999999998765432211 11134579999999999976     


Q ss_pred             --CCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhh--hcCCcHHHHHHHHHHhcCCCCC
Q psy2769         148 --LDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAI--CEGTPPEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       148 --~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~  222 (257)
                        ..++.++|||||||++|+|++ |..||.......     ..+............  ...+++.+.++|.+||+.||++
T Consensus       212 ~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  286 (434)
T 2rio_A          212 TKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE-----SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLK  286 (434)
T ss_dssp             CCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH-----HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGG
T ss_pred             cccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH-----HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhh
Confidence              567899999999999999998 999997643221     122222222111100  1234578999999999999999


Q ss_pred             CCChHHHHH
Q psy2769         223 EPNYGKLRD  231 (257)
Q Consensus       223 Rp~~~~~~~  231 (257)
                      ||++.++++
T Consensus       287 Rps~~eil~  295 (434)
T 2rio_A          287 RPTAMKVLR  295 (434)
T ss_dssp             SCCHHHHHT
T ss_pred             CCCHHHHHh
Confidence            999999975

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.2e-37  Score=257.61  Aligned_cols=216  Identities=18%  Similarity=0.269  Sum_probs=167.8

Q ss_pred             ccccHHHHHHHHHhcC----------CCCCcEEEeeeeeCC----ccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHG----------APGVPHVMGYGTSGD----YNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLAD   74 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~----------~~~i~~~~~~~~~~~----~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~   74 (257)
                      .+.+.+|+.++.++.+          ||||+++++++...+    ..+++||+++++|.+++... ...+++..+..++.
T Consensus        59 ~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~  138 (373)
T 1q8y_A           59 TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK  138 (373)
T ss_dssp             HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHH
Confidence            4568899999999873          789999999987654    78999999999999999864 45699999999999


Q ss_pred             HHHHHHHHHHhC-CccccCCCCCceEeeccC---CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC
Q psy2769          75 QMISRLEHVHRK-KIVHRDIKPDNFLMGVRE---NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ  150 (257)
Q Consensus        75 ~i~~~l~~lh~~-~i~H~dl~~~nili~~~~---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  150 (257)
                      |++.||.|||++ |++|+||||+||+++.++   ..+.++|+|||++.......      ....+|+.|+|||++.+..+
T Consensus       139 qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~~t~~y~aPE~~~~~~~  212 (373)
T 1q8y_A          139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY------TNSIQTREYRSPEVLLGAPW  212 (373)
T ss_dssp             HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC------CSCCSCGGGCCHHHHHTCCC
T ss_pred             HHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCC------CCCCCCccccCcHHHhCCCC
Confidence            999999999998 999999999999997542   23589999999997654321      34578999999999999999


Q ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHHHHHhhCChh-----------------------------
Q psy2769         151 SPRDDLEALCYTLVYFLRGKLPWQSIKSDN---EETRMQRVTEMKLTMTPE-----------------------------  198 (257)
Q Consensus       151 ~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~-----------------------------  198 (257)
                      +.++||||||+++|+|++|..||.......   ....+..+.......+..                             
T Consensus       213 ~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (373)
T 1q8y_A          213 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPL  292 (373)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCH
T ss_pred             CchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccch
Confidence            999999999999999999999998654221   222222222211111100                             


Q ss_pred             --------hhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         199 --------AICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       199 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                              .....+++.+.++|.+||+.||++|||++++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             hhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence                    011234677999999999999999999999976

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=7.1e-38  Score=256.25  Aligned_cols=212  Identities=20%  Similarity=0.331  Sum_probs=147.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC----SKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+..|+..+.+..+||||+++++++...+..++||||+.++|.+++...    ...+++..+..++.|++.||.+||+.
T Consensus        65 ~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  144 (327)
T 3aln_A           65 KQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN  144 (327)
T ss_dssp             HHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence            35566666444444599999999999999999999999977998888742    56799999999999999999999998


Q ss_pred             -CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh----cCCCCCCcchHHHHHH
Q psy2769          87 -KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH----QWLDQSPRDDLEALCY  161 (257)
Q Consensus        87 -~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~----~~~~~~~~~Dv~slg~  161 (257)
                       |++|+||+|+||+++.+   +.++|+|||++........    .....+++.|+|||.+    .+..++.++||||||+
T Consensus       145 ~~ivH~dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~  217 (327)
T 3aln_A          145 LKIIHRDIKPSNILLDRS---GNIKLCDFGISGQLVDSIA----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGI  217 (327)
T ss_dssp             HSCCCSCCCGGGEEEETT---TEEEECCCSSSCC----------------------------------CCSHHHHHHHHH
T ss_pred             CCEeECCCCHHHEEEcCC---CCEEEccCCCceecccccc----cccCCCCccccCceeeccccCcCCCCchhhHHHHHH
Confidence             99999999999999876   8999999999876543321    1334689999999998    4556889999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|+|++|..||......  ...+..+.....+.........+++.+.+++.+||+.||++||++.++++
T Consensus       218 il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          218 TLYELATGRFPYPKWNSV--FDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             HHHHHHHSCCCSSCC---------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHCCCCCCCcchH--HHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            999999999999864321  11111111111111111122468899999999999999999999999976

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.4e-37  Score=256.52  Aligned_cols=210  Identities=16%  Similarity=0.177  Sum_probs=171.7

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHH------HHHh-cCCCCHHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDL------FQYC-SKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~------~~~~-~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      +.+.+|+.++.++. ||||+++++++...+..++||||+ +++|.++      +... ...+++..+..++.|++.||.+
T Consensus        88 ~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  166 (348)
T 2pml_X           88 DDFKNELQIITDIK-NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSY  166 (348)
T ss_dssp             HHHHHHHHHHTTCC-CTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC-CCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHH
Confidence            78999999999998 999999999999999999999999 8899988      5532 4679999999999999999999


Q ss_pred             HHh-CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCC-cchHHHH
Q psy2769          83 VHR-KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSP-RDDLEAL  159 (257)
Q Consensus        83 lh~-~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~-~~Dv~sl  159 (257)
                      ||+ .|++|+||+|+||+++.+   +.++|+|||.+......     ......++..|+|||.+.+. .++. ++|||||
T Consensus       167 lH~~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~sl  238 (348)
T 2pml_X          167 IHNEKNICHRDVKPSNILMDKN---GRVKLSDFGESEYMVDK-----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL  238 (348)
T ss_dssp             HHHTSCEECCCCCGGGEEECTT---SCEEECCCTTCEECBTT-----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHH
T ss_pred             HhccCCEeecCCChHhEEEcCC---CcEEEeccccccccccc-----cccCCCCCcCccCchhhcCCCCCCcchhhHHHH
Confidence            999 999999999999999866   89999999998775433     12456789999999999887 5555 9999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCCh--------------hhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTP--------------EAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      |+++|+|++|..||......  ......+.......+.              ......+|+.+.+++.+||+.||++||+
T Consensus       239 G~il~~l~~g~~pf~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps  316 (348)
T 2pml_X          239 GICLYVMFYNVVPFSLKISL--VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT  316 (348)
T ss_dssp             HHHHHHHHHSSCSSCCSSCS--HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHHHHHHHhCCCCCCCCCcH--HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCC
Confidence            99999999999999875442  2222222222111110              0011568899999999999999999999


Q ss_pred             hHHHHH
Q psy2769         226 YGKLRD  231 (257)
Q Consensus       226 ~~~~~~  231 (257)
                      ++++++
T Consensus       317 ~~e~l~  322 (348)
T 2pml_X          317 SEDALK  322 (348)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            999876

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.5e-36  Score=244.13  Aligned_cols=196  Identities=18%  Similarity=0.204  Sum_probs=154.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...+.+|+.++.++.+||||+++++++..    ....++||||+ +++|.+++... ...+++..+..++.|++.||.||
T Consensus        54 ~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l  133 (299)
T 3m2w_A           54 CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL  133 (299)
T ss_dssp             SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            35678999999887779999999999876    66799999999 88999999864 34699999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.|++|+||||+||+++.+..++.++|+|||++.....                         ..++.++||||||+++
T Consensus       134 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-------------------------~~~~~~~DiwslG~il  188 (299)
T 3m2w_A          134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-------------------------EKYDKSCDMWSLGVIM  188 (299)
T ss_dssp             HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT-------------------------CGGGGHHHHHHHHHHH
T ss_pred             HhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc-------------------------ccCCchhhHHHHHHHH
Confidence            999999999999999998754458899999999865321                         2356789999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHH-HHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRM-QRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||............ ..+..... ..+......+|+.+.+++.+||+.||++||+++++++
T Consensus       189 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          189 YILLCGYPPFYSNHGLAISPGMKTRIRMGQY-EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHHHSSCSCCC-------CCSCCSSCTTCC-SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHCCCCCCCCcchhhhHHHHHHHhhccc-cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            9999999999764322110000 00000011 1122223578999999999999999999999999987

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=2.8e-36  Score=264.06  Aligned_cols=226  Identities=16%  Similarity=0.183  Sum_probs=172.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee------CCccEEEEecc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS------GDYNILVMELL-GPSLEDLFQYCS--KRFSLKTVLMLADQMISRL   80 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~------~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l   80 (257)
                      .+++.+|+.++.++. ||||+++++++..      ++..++||||+ +++|.+++....  ..+++..+..++.|++.||
T Consensus        56 ~~~~~~Ei~iL~~L~-HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL  134 (676)
T 3qa8_A           56 RERWCLEIQIMKKLN-HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL  134 (676)
T ss_dssp             HHHHHHHHHHHHHCC-BTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCC-CCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHH
Confidence            456889999999997 9999999998765      66789999999 999999998532  2689999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALC  160 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg  160 (257)
                      .|||+.|++|+||+|+||+++.++....++|+|||.+........    .....+++.|+|||.+.+..++.++||||+|
T Consensus       135 ~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~----~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLG  210 (676)
T 3qa8_A          135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL----CTEFVGTLQYLAPELLEQKKYTVTVDYWSFG  210 (676)
T ss_dssp             HHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCC----CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHH
T ss_pred             HHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccc----cccccCCcccCChHHhccCCCCchhHHHHHH
Confidence            999999999999999999999775545699999999976644321    1456789999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHH------HHHHHH-----HHHHhh-----CChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEE------TRMQRV-----TEMKLT-----MTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~------~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      +++|+|++|..||.........      .....+     ..+...     ..+......+++.+.++|..||..||++||
T Consensus       211 viLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRP  290 (676)
T 3qa8_A          211 TLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRG  290 (676)
T ss_dssp             HHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---
T ss_pred             HHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCc
Confidence            9999999999999763111000      000000     000000     001112234678899999999999999999


Q ss_pred             ChHH-----HHHHHHHHHHhc
Q psy2769         225 NYGK-----LRDSFRNLLENK  240 (257)
Q Consensus       225 ~~~~-----~~~~l~~~~~~~  240 (257)
                      ++.+     +.+.+.+++...
T Consensus       291 Ta~elL~hp~F~~l~~iL~~k  311 (676)
T 3qa8_A          291 TDPQNPNVGCFQALDSILSLK  311 (676)
T ss_dssp             CCTTCCCCTTHHHHHHHHCCC
T ss_pred             CHHHHhcCHHHHHHHHHHhcc
Confidence            9988     456666666543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=2e-35  Score=237.29  Aligned_cols=192  Identities=15%  Similarity=0.167  Sum_probs=153.5

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +.+.+|+.++.++. ||||+++++++...+..|+||||+ |++|.++++.   .....++..++.|++.||.|||+.|++
T Consensus        76 ~~~~~e~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~i~~ql~~aL~~lH~~giv  151 (286)
T 3uqc_A           76 QETLSRTLRLSRID-KPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT---SPSPVGAIRAMQSLAAAADAAHRAGVA  151 (286)
T ss_dssp             HHHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhcCC-CCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCCc
Confidence            67899999999997 999999999999999999999999 8999999862   346678899999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhC
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRG  169 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g  169 (257)
                      |+||||+||+++.+   +.++|++++.                       ++       .++.++||||||+++|+|++|
T Consensus       152 H~Dikp~NIll~~~---g~~kl~~~~~-----------------------~~-------~~~~~~Di~slG~il~elltg  198 (286)
T 3uqc_A          152 LSIDHPSRVRVSID---GDVVLAYPAT-----------------------MP-------DANPQDDIRGIGASLYALLVN  198 (286)
T ss_dssp             CCCCSGGGEEEETT---SCEEECSCCC-----------------------CT-------TCCHHHHHHHHHHHHHHHHHS
T ss_pred             cCCCCcccEEEcCC---CCEEEEeccc-----------------------cC-------CCCchhHHHHHHHHHHHHHHC
Confidence            99999999999876   7888874332                       22       367899999999999999999


Q ss_pred             CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         170 KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       170 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      +.||.+............... ............+|+.+.++|.+||+.||++| |+.++++.|+++.....
T Consensus       199 ~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          199 RWPLPEAGVRSGLAPAERDTA-GQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             EECSCCCSBCCCSEECCBCTT-SCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             CCCCCcCCcchhhHHHHHHhc-cCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence            999987543221000000000 11112334447899999999999999999999 99999999999876543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.8e-35  Score=260.34  Aligned_cols=199  Identities=16%  Similarity=0.206  Sum_probs=161.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCc-----cEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDY-----NILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~-----~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.++.++. ||||+++++++...+.     .|+||||+ |++|.+.+.   ..+++..+..++.|++.||.||
T Consensus       123 ~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~---~~l~~~~~~~~~~qi~~aL~~l  198 (681)
T 2pzi_A          123 QAMAMAERQFLAEVV-HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---QKLPVAEAIAYLLEILPALSYL  198 (681)
T ss_dssp             HHHHHHHHGGGGGCC-CTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC-------CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHh---CCCCHHHHHHHHHHHHHHHHHH
Confidence            456789999999998 9999999999987665     69999999 999988766   3799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.||+|+||||+||+++.    +.+||+|||++......       ....||+.|+|||++.+.. +.++||||||+++
T Consensus       199 H~~giiHrDlkp~NIll~~----~~~kl~DFG~a~~~~~~-------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l  266 (681)
T 2pzi_A          199 HSIGLVYNDLKPENIMLTE----EQLKLIDLGAVSRINSF-------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTL  266 (681)
T ss_dssp             HHTTEECCCCSGGGEEECS----SCEEECCCTTCEETTCC-------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHH
T ss_pred             HHCCCeecccChHHeEEeC----CcEEEEecccchhcccC-------CccCCCccccCHHHHcCCC-CCceehhhhHHHH
Confidence            9999999999999999975    37999999999875432       4457899999999998754 8899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-ChHHHHHHHHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-NYGKLRDSFRNLLE  238 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~~~~~l~~~~~  238 (257)
                      |+|++|..||........            +...+  ....++.+.++|.+||+.||++|| +++++...|...++
T Consensus       267 ~~l~~g~~~~~~~~~~~~------------~~~~~--~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  328 (681)
T 2pzi_A          267 AALTLDLPTRNGRYVDGL------------PEDDP--VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR  328 (681)
T ss_dssp             HHHHSCCCEETTEECSSC------------CTTCH--HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCcccccccc------------ccccc--ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence            999999988876322110            00000  122457799999999999999999 57777777776654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2.5e-34  Score=242.24  Aligned_cols=201  Identities=14%  Similarity=0.103  Sum_probs=151.0

Q ss_pred             cccccHHHHHHHHHhcCCCC---------------------CcEEEeeeee-----CCccEEEEeccCCCHHHHHHHh--
Q psy2769           9 PVQRLFWERNFYEKLHGAPG---------------------VPHVMGYGTS-----GDYNILVMELLGPSLEDLFQYC--   60 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~---------------------i~~~~~~~~~-----~~~~~~v~e~~~~~L~~~~~~~--   60 (257)
                      ..+.+.+|+.++..+.+.++                     ...+..++..     ....+++|+.++++|.++++..  
T Consensus       121 ~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~  200 (413)
T 3dzo_A          121 AIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLS  200 (413)
T ss_dssp             CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhc
Confidence            35678899999998873221                     2222222222     2246788888899999999632  


Q ss_pred             ----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCc
Q psy2769          61 ----SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGT  136 (257)
Q Consensus        61 ----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~  136 (257)
                          ...+++..+..++.|++.||.|||++||+||||||+||+++.+   +.+||+|||++......      .....| 
T Consensus       201 ~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~---~~~kL~DFG~a~~~~~~------~~~~~g-  270 (413)
T 3dzo_A          201 HSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR---GGVFLTGFEHLVRDGAS------AVSPIG-  270 (413)
T ss_dssp             HTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---CCEEECCGGGCEETTEE------ECCCCC-
T ss_pred             ccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecC---CeEEEEeccceeecCCc------cccCCC-
Confidence                3447778899999999999999999999999999999999876   78999999998764332      244567 


Q ss_pred             ccccChhHh----------cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcH
Q psy2769         137 ARYASVNAH----------QWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPP  206 (257)
Q Consensus       137 ~~~~aPE~~----------~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (257)
                      +.|+|||++          .+..++.++||||||+++|+|++|+.||..........       ..     ......+|+
T Consensus       271 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~-------~~-----~~~~~~~~~  338 (413)
T 3dzo_A          271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSE-------WI-----FRSCKNIPQ  338 (413)
T ss_dssp             TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSG-------GG-----GSSCCCCCH
T ss_pred             CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHH-------HH-----HhhcccCCH
Confidence            999999999          55557889999999999999999999998743322100       00     111146889


Q ss_pred             HHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         207 EFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       207 ~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      .+.++|.+||+.||++||++.++++
T Consensus       339 ~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          339 PVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999999999999999999877743

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=9.7e-34  Score=232.55  Aligned_cols=203  Identities=15%  Similarity=0.060  Sum_probs=153.3

Q ss_pred             ccccHHHHHHHHHhc--------CCCCCcEEEeee-----------------ee-------------CCccEEEEecc-C
Q psy2769          10 VQRLFWERNFYEKLH--------GAPGVPHVMGYG-----------------TS-------------GDYNILVMELL-G   50 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~--------~~~~i~~~~~~~-----------------~~-------------~~~~~~v~e~~-~   50 (257)
                      .+.+.+|+.+++.+.        +||||+++.+.+                 .+             ....|+||||+ +
T Consensus        67 ~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~  146 (336)
T 2vuw_A           67 FEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFG  146 (336)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCC
Confidence            367899999999997        588887777653                 22             67899999999 8


Q ss_pred             CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCceEeeccCC-----------------CCeEEEE
Q psy2769          51 PSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH-RKKIVHRDIKPDNFLMGVREN-----------------FNTVYLV  112 (257)
Q Consensus        51 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~i~H~dl~~~nili~~~~~-----------------~~~~~l~  112 (257)
                      |++.+.+.  ...+++..+..++.|++.||.||| +.||+||||||+||+++.++.                 ...+||+
T Consensus       147 g~ll~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~  224 (336)
T 2vuw_A          147 GIDLEQMR--TKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSII  224 (336)
T ss_dssp             CEETGGGT--TTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEEC
T ss_pred             CccHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEe
Confidence            87666664  367899999999999999999999 999999999999999987621                 1289999


Q ss_pred             eCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH-HHHHHhCCCCCCCCCCccHHHHHHHHHHH
Q psy2769         113 DFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT-LVYFLRGKLPWQSIKSDNEETRMQRVTEM  191 (257)
Q Consensus       113 df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~-l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  191 (257)
                      |||++.....        ....||+.|+|||++.+.. +.++||||++++ .++++.|..||.....  .......+...
T Consensus       225 DFG~a~~~~~--------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~  293 (336)
T 2vuw_A          225 DYTLSRLERD--------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLW--LHYLTDKMLKQ  293 (336)
T ss_dssp             CCTTCBEEET--------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHH--HHHHHHHHHHT
T ss_pred             eccccEecCC--------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhh--hhHHHHhhhhh
Confidence            9999986543        2347899999999999876 889999998777 6678889988854110  01111111111


Q ss_pred             -Hh-hCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         192 -KL-TMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       192 -~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                       .. ..........+|+.+.++|++||+.|     |+++++
T Consensus       294 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          294 MTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             hccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence             01 11222334568889999999999976     887776

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=2.3e-32  Score=238.02  Aligned_cols=150  Identities=19%  Similarity=0.216  Sum_probs=113.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+++.+|+++|.++.+|+||+++++++++++..|+||||+ |++|.+++.. ...+++.   .++.||+.||.|+|++|
T Consensus       284 ~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~-~~~l~~~---~I~~QIl~AL~ylH~~G  359 (569)
T 4azs_A          284 NKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA-GEEIDRE---KILGSLLRSLAALEKQG  359 (569)
T ss_dssp             HHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHT-TCCCCHH---HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHh-CCCCCHH---HHHHHHHHHHHHHHHCC
Confidence            34679999999999988999999999999999999999999 9999999984 5567765   47899999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+||||||+||+++.+   +.+||+|||+++......   .......||+.|+|||++.+. ....+|+||+|++.+++.
T Consensus       360 IIHRDIKPeNILL~~d---g~vKL~DFGlAr~~~~~~---~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~  432 (569)
T 4azs_A          360 FWHDDVRPWNVMVDAR---QHARLIDFGSIVTTPQDC---SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLP  432 (569)
T ss_dssp             CEESCCCGGGEEECTT---SCEEECCCTTEESCC------CCSHHHHHHHHHHHHHHC------------------CCCC
T ss_pred             ceeccCchHhEEECCC---CCEEEeecccCeeCCCCC---ccccCceechhhccHHHhCCC-CCCcccccccccchhhhc
Confidence            9999999999999876   899999999997654332   122456799999999999874 567899999999888775


Q ss_pred             hC
Q psy2769         168 RG  169 (257)
Q Consensus       168 ~g  169 (257)
                      ++
T Consensus       433 ~~  434 (569)
T 4azs_A          433 QP  434 (569)
T ss_dssp             TT
T ss_pred             cc
Confidence            54

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.87  E-value=4.4e-24  Score=185.02  Aligned_cols=150  Identities=15%  Similarity=0.221  Sum_probs=121.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+++.+|+.++++++ ||||+++..++......|+||||+ +++|.+++..         +..++.|++.||.|||++||
T Consensus       383 ~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gI  452 (540)
T 3en9_A          383 KSRTAREARYLALVK-DFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDV  452 (540)
T ss_dssp             HHHHHHHHHHHHHGG-GGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhcC-CCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcC
Confidence            345799999999998 999995555555667789999999 8999998883         56899999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC----CccCCCCcccccChhHhcC--CCCCCcchHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI----RTRGLTGTARYASVNAHQW--LDQSPRDDLEALCYT  162 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~--~~~~~~~Dv~slg~~  162 (257)
                      +||||||+||+++.     .+||+|||++...........    ......||+.|+|||++..  ..++...|+|+..+-
T Consensus       453 iHrDiKp~NILl~~-----~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~  527 (540)
T 3en9_A          453 IHNDLTTSNFIFDK-----DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILE  527 (540)
T ss_dssp             ECTTCCTTSEEESS-----SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHH
T ss_pred             ccCCCCHHHEEECC-----eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHH
Confidence            99999999999964     799999999987643211000    0124578999999999987  456778899999888


Q ss_pred             HHHHHhCCCCCC
Q psy2769         163 LVYFLRGKLPWQ  174 (257)
Q Consensus       163 l~~l~~g~~p~~  174 (257)
                      ..+-..++.+|.
T Consensus       528 ~l~~v~~r~rY~  539 (540)
T 3en9_A          528 LMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHTCSCCC
T ss_pred             HHHHHHhccccC
Confidence            888777766653

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.72  E-value=2e-18  Score=137.84  Aligned_cols=104  Identities=20%  Similarity=0.309  Sum_probs=83.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++.++. |++++.+++   . +..++||||+ |++|.+ +.       ......++.|++.||.+||+.|+
T Consensus       148 ~~~~~~E~~~l~~l~-~~~v~~~~~---~-~~~~lvmE~~~g~~L~~-l~-------~~~~~~i~~qi~~~l~~lH~~gi  214 (282)
T 1zar_A          148 IRSARNEFRALQKLQ-GLAVPKVYA---W-EGNAVLMELIDAKELYR-VR-------VENPDEVLDMILEEVAKFYHRGI  214 (282)
T ss_dssp             HHHHHHHHHHHHHTT-TSSSCCEEE---E-ETTEEEEECCCCEEGGG-CC-------CSCHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhcc-CCCcCeEEe---c-cceEEEEEecCCCcHHH-cc-------hhhHHHHHHHHHHHHHHHHHCCC
Confidence            456889999999998 565665543   3 4579999999 889987 32       12345799999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ  146 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~  146 (257)
                      +|+||||+||+++ +   +.++|+|||++..                +..+.|||.+.
T Consensus       215 iHrDlkp~NILl~-~---~~vkl~DFG~a~~----------------~~~~~a~e~l~  252 (282)
T 1zar_A          215 VHGDLSQYNVLVS-E---EGIWIIDFPQSVE----------------VGEEGWREILE  252 (282)
T ss_dssp             ECSCCSTTSEEEE-T---TEEEECCCTTCEE----------------TTSTTHHHHHH
T ss_pred             EeCCCCHHHEEEE-C---CcEEEEECCCCeE----------------CCCCCHHHHHH
Confidence            9999999999998 5   8999999999864                23457888874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.52  E-value=1.1e-14  Score=114.79  Aligned_cols=95  Identities=25%  Similarity=0.373  Sum_probs=76.3

Q ss_pred             ccHHHHHHHHHhcCCCC--CcEEEeeeeeCCccEEEEeccC--C----CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          12 RLFWERNFYEKLHGAPG--VPHVMGYGTSGDYNILVMELLG--P----SLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~--i~~~~~~~~~~~~~~~v~e~~~--~----~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+|+.++.++. |++  ++.+++.    ...++||||++  |    +|.+....    .++..+..++.|++.||.+|
T Consensus       116 ~~~~E~~~l~~l~-~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~l  186 (258)
T 1zth_A          116 WTEKEFRNLERAK-EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRL  186 (258)
T ss_dssp             HHHHHHHHHHHHH-HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHH
Confidence            6889999999998 664  4555553    35789999994  3    67665431    23556788999999999999


Q ss_pred             H-hCCccccCCCCCceEeeccCCCCeEEEEeCCcceec
Q psy2769          84 H-RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF  120 (257)
Q Consensus        84 h-~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~  120 (257)
                      | +.|++||||||.||+++.     .++|+|||++...
T Consensus       187 H~~~givHrDlkp~NILl~~-----~~~liDFG~a~~~  219 (258)
T 1zth_A          187 YQEAELVHADLSEYNIMYID-----KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHTSCEECSSCSTTSEEESS-----SEEECCCTTCEET
T ss_pred             HHHCCEEeCCCCHHHEEEcC-----cEEEEECcccccC
Confidence            9 999999999999999963     6999999998653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.21  E-value=8.1e-12  Score=102.85  Aligned_cols=94  Identities=18%  Similarity=0.285  Sum_probs=68.5

Q ss_pred             HHHHHHHHHhcCCCCC--cEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          14 FWERNFYEKLHGAPGV--PHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        14 ~~E~~~~~~l~~~~~i--~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      .+|...+.++. +.++  +..++.    ...++||||+ |.+|..+..       ......++.|++.+|.++|+.|++|
T Consensus       161 ~kE~~nL~rL~-~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH~~gIVH  228 (397)
T 4gyi_A          161 IKEFAFMKALY-EEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLAKHGLIH  228 (397)
T ss_dssp             HHHHHHHHHHH-HTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHH-hcCCCCCeeeec----cCceEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHHHCCCcC
Confidence            45778888886 4443  333332    2358999999 777654322       2345678899999999999999999


Q ss_pred             cCCCCCceEeeccCCC-------CeEEEEeCCccee
Q psy2769          91 RDIKPDNFLMGVRENF-------NTVYLVDFGLAVD  119 (257)
Q Consensus        91 ~dl~~~nili~~~~~~-------~~~~l~df~~~~~  119 (257)
                      |||||.||+++.++..       ..+.|+||+-+..
T Consensus       229 rDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          229 GDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            9999999999876310       1489999997764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.18  E-value=7.6e-11  Score=92.80  Aligned_cols=101  Identities=15%  Similarity=0.214  Sum_probs=81.8

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR--   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--   85 (257)
                      ....+.+|+.++..|.++..++++++++...+..|+|||++ |.+|.+.+.      +......++.++..+++.||+  
T Consensus        52 ~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~  125 (263)
T 3tm0_A           52 TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSID  125 (263)
T ss_dssp             STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCC
Confidence            34579999999999986778999999999888999999999 888876521      122334678889999999998  


Q ss_pred             ---------------------------------------------------------CCccccCCCCCceEeeccCCCCe
Q psy2769          86 ---------------------------------------------------------KKIVHRDIKPDNFLMGVRENFNT  108 (257)
Q Consensus        86 ---------------------------------------------------------~~i~H~dl~~~nili~~~~~~~~  108 (257)
                                                                               .+++|||+++.||+++.+   +.
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~---~~  202 (263)
T 3tm0_A          126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDG---KV  202 (263)
T ss_dssp             CTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETT---EE
T ss_pred             cccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECC---cE
Confidence                                                                     448899999999999643   45


Q ss_pred             EEEEeCCcce
Q psy2769         109 VYLVDFGLAV  118 (257)
Q Consensus       109 ~~l~df~~~~  118 (257)
                      +.++||+.+.
T Consensus       203 ~~lIDwe~a~  212 (263)
T 3tm0_A          203 SGFIDLGRSG  212 (263)
T ss_dssp             EEECCCTTCE
T ss_pred             EEEEEchhcc
Confidence            6799999774

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.96  E-value=1.1e-09  Score=85.88  Aligned_cols=98  Identities=15%  Similarity=0.092  Sum_probs=73.4

Q ss_pred             ccccHHHHHHHHHhcCCCC-CcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769          10 VQRLFWERNFYEKLHGAPG-VPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~-i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+.+|+.+++.+.++.. ++++++++..++..++|||++ |.++ + ..    ..+   ...++.++...++.||+..
T Consensus        57 ~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l-~-~~----~~~---~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           57 LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL-L-SS----HLA---PAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET-T-TS----CCC---HHHHHHHHHHHHHHHTTSC
T ss_pred             chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc-C-cC----cCC---HhHHHHHHHHHHHHHhCCC
Confidence            4678999999999986633 778999888877899999999 7776 3 11    112   1245666667777777543


Q ss_pred             ----------------------------------------------------------ccccCCCCCceEeeccCCCCeE
Q psy2769          88 ----------------------------------------------------------IVHRDIKPDNFLMGVRENFNTV  109 (257)
Q Consensus        88 ----------------------------------------------------------i~H~dl~~~nili~~~~~~~~~  109 (257)
                                                                                ++|+|++|.||+++.+   +.+
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~---~~~  204 (264)
T 1nd4_A          128 PATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENG---RFS  204 (264)
T ss_dssp             GGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETT---EEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECC---cEE
Confidence                                                                      8999999999999654   556


Q ss_pred             EEEeCCccee
Q psy2769         110 YLVDFGLAVD  119 (257)
Q Consensus       110 ~l~df~~~~~  119 (257)
                      .++||+.+..
T Consensus       205 ~liD~~~a~~  214 (264)
T 1nd4_A          205 GFIDCGRLGV  214 (264)
T ss_dssp             EECCCTTCEE
T ss_pred             EEEcchhccc
Confidence            7999998743

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.90  E-value=1.1e-09  Score=88.13  Aligned_cols=155  Identities=16%  Similarity=0.231  Sum_probs=101.6

Q ss_pred             cccccHHHHHHHHHhcCCCC--CcEEEeeeeeCC---ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPG--VPHVMGYGTSGD---YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~--i~~~~~~~~~~~---~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ....+.+|+.++..+..+..  +++++.......   ..|+||+++ |.++.+...   ..++..+...++.++...++.
T Consensus        53 ~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~  129 (304)
T 3sg8_A           53 GSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSE  129 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHH
Confidence            34678999999999964432  567776654433   458899999 877765333   246777778888888888888


Q ss_pred             HHh----------------------------------------------------------CCccccCCCCCceEeeccC
Q psy2769          83 VHR----------------------------------------------------------KKIVHRDIKPDNFLMGVRE  104 (257)
Q Consensus        83 lh~----------------------------------------------------------~~i~H~dl~~~nili~~~~  104 (257)
                      ||+                                                          ..++|||+++.||+++.+ 
T Consensus       130 LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-  208 (304)
T 3sg8_A          130 LHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-  208 (304)
T ss_dssp             HHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-
T ss_pred             HHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-
Confidence            885                                                          236999999999999863 


Q ss_pred             CCCeEEEEeCCcceecCCCCCCCCCccCCCCcccc---cChhHh----cCCCC----------CCcchHHHHHHHHHHHH
Q psy2769         105 NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARY---ASVNAH----QWLDQ----------SPRDDLEALCYTLVYFL  167 (257)
Q Consensus       105 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~---~aPE~~----~~~~~----------~~~~Dv~slg~~l~~l~  167 (257)
                      ....+.++||+.+....+..       ........   .+|+..    .....          ....+.|+++.++|.+.
T Consensus       209 ~~~~~~~iD~~~~~~~~~~~-------Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~  281 (304)
T 3sg8_A          209 KNTICGIIDFGDAAISDPDN-------DFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKE  281 (304)
T ss_dssp             TTEEEEECCCTTCEEECTTH-------HHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCccCChHH-------HHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            12568899999876532211       00000011   223221    11111          11268899999999999


Q ss_pred             hCCCCCC
Q psy2769         168 RGKLPWQ  174 (257)
Q Consensus       168 ~g~~p~~  174 (257)
                      +|..+|.
T Consensus       282 ~g~~~~~  288 (304)
T 3sg8_A          282 YGYMDWY  288 (304)
T ss_dssp             TTCHHHH
T ss_pred             cCCHHHH
Confidence            9976654

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.79  E-value=2e-08  Score=82.64  Aligned_cols=106  Identities=21%  Similarity=0.275  Sum_probs=82.5

Q ss_pred             ccccHHHHHHHHHhcCC-CCCcEEEeeeeeC---CccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGA-PGVPHVMGYGTSG---DYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~-~~i~~~~~~~~~~---~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ...+.+|+.+++.|... ..+++++.++.+.   +..++|||++ |.++.+.   ....++......++.++...|+.||
T Consensus        80 ~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~---~~~~l~~~~~~~~~~~l~~~La~LH  156 (359)
T 3dxp_A           80 AHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQ---SLPGMSPAERTAIYDEMNRVIAAMH  156 (359)
T ss_dssp             --CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCT---TCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCC---ccccCCHHHHHHHHHHHHHHHHHHh
Confidence            45789999999999853 4589999988776   4589999999 7666431   1234678888899999999999999


Q ss_pred             h----------------------------------------------------------CCccccCCCCCceEeeccCCC
Q psy2769          85 R----------------------------------------------------------KKIVHRDIKPDNFLMGVRENF  106 (257)
Q Consensus        85 ~----------------------------------------------------------~~i~H~dl~~~nili~~~~~~  106 (257)
                      +                                                          .+++|||+++.||+++.++. 
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~-  235 (359)
T 3dxp_A          157 TVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP-  235 (359)
T ss_dssp             HSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS-
T ss_pred             CCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC-
Confidence            7                                                          36899999999999986521 


Q ss_pred             CeEEEEeCCccee
Q psy2769         107 NTVYLVDFGLAVD  119 (257)
Q Consensus       107 ~~~~l~df~~~~~  119 (257)
                      ..+.++||+.+..
T Consensus       236 ~v~~viDwe~a~~  248 (359)
T 3dxp_A          236 RVLAVLDWELSTL  248 (359)
T ss_dssp             CEEEECCCTTCEE
T ss_pred             cEEEEECcccccc
Confidence            3468999998764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.44  E-value=7.9e-07  Score=71.41  Aligned_cols=108  Identities=20%  Similarity=0.251  Sum_probs=72.4

Q ss_pred             cccccHHHHHHHHHhcCC-C-CCcEEEeeee-eCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGA-P-GVPHVMGYGT-SGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~-~-~i~~~~~~~~-~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ....+.+|+.++..|.++ + .+++++.++. ..+..+++|+++ |.++.+..-   ..++......++.++...|+.||
T Consensus        52 ~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~---~~l~~~~~~~~~~~lg~~La~LH  128 (306)
T 3tdw_A           52 GADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGM---AVLPDDAKDRLALQLAEFMNELS  128 (306)
T ss_dssp             HHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHHH---TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhhh---hhCCHHHHHHHHHHHHHHHHHHh
Confidence            346789999999999854 2 3778887774 455678999999 877765321   12344444444444444444444


Q ss_pred             h------------------------------------------------------------CCccccCCCCCceEeeccC
Q psy2769          85 R------------------------------------------------------------KKIVHRDIKPDNFLMGVRE  104 (257)
Q Consensus        85 ~------------------------------------------------------------~~i~H~dl~~~nili~~~~  104 (257)
                      +                                                            ..++|+|+++.||+++.++
T Consensus       129 ~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~  208 (306)
T 3tdw_A          129 AFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS  208 (306)
T ss_dssp             HSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTC
T ss_pred             cCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCC
Confidence            2                                                            2458999999999998622


Q ss_pred             CCCe-EEEEeCCccee
Q psy2769         105 NFNT-VYLVDFGLAVD  119 (257)
Q Consensus       105 ~~~~-~~l~df~~~~~  119 (257)
                      ..+. +.++||+.+..
T Consensus       209 ~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          209 RQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             SSCCEEEECCCTTCEE
T ss_pred             CCCceEEEEehhhcCC
Confidence            2244 58999998754

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.37  E-value=1.5e-06  Score=68.33  Aligned_cols=101  Identities=15%  Similarity=0.134  Sum_probs=75.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK---   86 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---   86 (257)
                      ..+.+|...+..|..+-.+++++.++.+.+..++||+++ |.++.+.....     ......+..++...|+-||+.   
T Consensus        64 ~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~  138 (272)
T 4gkh_A           64 NDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVC  138 (272)
T ss_dssp             HHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGG
T ss_pred             hHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcc
Confidence            457889999999986655899999999989999999999 88877765521     122334555566666666631   


Q ss_pred             -------------------------------------------------------CccccCCCCCceEeeccCCCCeEEE
Q psy2769          87 -------------------------------------------------------KIVHRDIKPDNFLMGVRENFNTVYL  111 (257)
Q Consensus        87 -------------------------------------------------------~i~H~dl~~~nili~~~~~~~~~~l  111 (257)
                                                                             .++|||+++.||+++.+   +.+-|
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~---~~~~v  215 (272)
T 4gkh_A          139 NCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEG---KLIGC  215 (272)
T ss_dssp             GCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETT---EEEEE
T ss_pred             cCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECC---eEEEE
Confidence                                                                   26899999999999754   56779


Q ss_pred             EeCCccee
Q psy2769         112 VDFGLAVD  119 (257)
Q Consensus       112 ~df~~~~~  119 (257)
                      +||+.+..
T Consensus       216 iDwe~a~~  223 (272)
T 4gkh_A          216 IDVGRVGI  223 (272)
T ss_dssp             CCCTTCEE
T ss_pred             EECccccc
Confidence            99998753

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=98.31  E-value=2.3e-05  Score=58.78  Aligned_cols=144  Identities=13%  Similarity=0.084  Sum_probs=93.0

Q ss_pred             CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC
Q psy2769          50 GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV-HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI  128 (257)
Q Consensus        50 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~  128 (257)
                      .-||.++++.++.++++++++.++.|.+.+|.-. +++.-...=+.|..|++..+   |.|.+.+-. +.          
T Consensus        32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~d---G~V~f~~~~-s~----------   97 (229)
T 2yle_A           32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRD---GAVTLAPAA-DD----------   97 (229)
T ss_dssp             EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETT---SCEEECCC--------------
T ss_pred             cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecC---Cceeccccc-cc----------
Confidence            3579999998899999999999999999998765 22221223334678888776   666664311 10          


Q ss_pred             CccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHH
Q psy2769         129 RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEF  208 (257)
Q Consensus       129 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (257)
                           .....+.+||... ...+.+.=|||||+++|..+--..|-..                         ...+|+.+
T Consensus        98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~e-------------------------E~eLS~~L  146 (229)
T 2yle_A           98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENE-------------------------ERELSPPL  146 (229)
T ss_dssp             --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTE-------------------------EECCCHHH
T ss_pred             -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCccc-------------------------chhhCHHH
Confidence                 1122455666653 2446788999999999998742222111                         15688889


Q ss_pred             HHHHHHHhcC-------------------------CCCCCCChHHHHHHHHHHHH
Q psy2769         209 AEFLRYCRGL-------------------------AFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       209 ~~li~~~l~~-------------------------~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      ..||..|..-                         .+..|++++++++.-+.-+.
T Consensus       147 E~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl~  201 (229)
T 2yle_A          147 EQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHLP  201 (229)
T ss_dssp             HHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHHHHHTTSS
T ss_pred             HHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHHHHHhhcc
Confidence            9999888755                         24577888888876665544

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.00  E-value=6.2e-06  Score=67.53  Aligned_cols=43  Identities=21%  Similarity=0.193  Sum_probs=33.6

Q ss_pred             cccHHHHHHHHHhcCC--CCCcEEEeeeeeC---CccEEEEecc-CCCH
Q psy2769          11 QRLFWERNFYEKLHGA--PGVPHVMGYGTSG---DYNILVMELL-GPSL   53 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~--~~i~~~~~~~~~~---~~~~~v~e~~-~~~L   53 (257)
                      ..+.+|+.++..|..+  -.+++++.++...   +..++|||++ |.++
T Consensus        72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A           72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCC
T ss_pred             hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCCh
Confidence            5789999999999855  3588898887655   3578999999 6554

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.01  E-value=0.0028  Score=51.11  Aligned_cols=108  Identities=17%  Similarity=0.151  Sum_probs=63.7

Q ss_pred             cccHHHHHHHHHhcCCCC-CcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-------------------------CC
Q psy2769          11 QRLFWERNFYEKLHGAPG-VPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-------------------------KR   63 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~-i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-------------------------~~   63 (257)
                      ..+..|+.++..|..+.. +++++.+....+  +++||.+ +.++.+.+....                         ..
T Consensus        57 ~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~  134 (333)
T 3csv_A           57 GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELAR  134 (333)
T ss_dssp             CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCB
T ss_pred             ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCc
Confidence            568899999999975532 677887654333  7899999 666654443110                         01


Q ss_pred             CCHHHHH-------HHH-------------HHHHHHHHHH------HhCCccccCCCCCceEeeccCC-CCeEEEEeCCc
Q psy2769          64 FSLKTVL-------MLA-------------DQMISRLEHV------HRKKIVHRDIKPDNFLMGVREN-FNTVYLVDFGL  116 (257)
Q Consensus        64 ~~~~~~~-------~~~-------------~~i~~~l~~l------h~~~i~H~dl~~~nili~~~~~-~~~~~l~df~~  116 (257)
                      ++.....       .+.             ..+...+..+      +...++|||+.+.||+++.+.. .+.+.++||+.
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~  214 (333)
T 3csv_A          135 LDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQD  214 (333)
T ss_dssp             CCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTT
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCC
Confidence            2221110       000             0111112222      2346899999999999975311 15689999998


Q ss_pred             ceec
Q psy2769         117 AVDF  120 (257)
Q Consensus       117 ~~~~  120 (257)
                      +..-
T Consensus       215 a~~G  218 (333)
T 3csv_A          215 AKLG  218 (333)
T ss_dssp             CEEE
T ss_pred             cCcC
Confidence            7653

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.88  E-value=0.0044  Score=49.24  Aligned_cols=38  Identities=16%  Similarity=0.123  Sum_probs=27.3

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CC
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GP   51 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~   51 (257)
                      ...+|+.++..+..+...++++..+..  .-+++++++ +|
T Consensus        54 ~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g   92 (301)
T 3dxq_A           54 NRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGA   92 (301)
T ss_dssp             CHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTC
T ss_pred             CHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCC
Confidence            347899999999866555788876543  346889998 54

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.69  E-value=0.0063  Score=50.32  Aligned_cols=31  Identities=13%  Similarity=0.289  Sum_probs=25.6

Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      ...++|||+.+.||+++.+    .+.++||+.+..
T Consensus       226 ~~~L~HGDl~~~Nil~~~~----~~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH----ETKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS----CEEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEeCC----CeEEEeCccccc
Confidence            4578999999999999653    489999987754

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.56  E-value=0.0032  Score=50.44  Aligned_cols=43  Identities=26%  Similarity=0.261  Sum_probs=35.6

Q ss_pred             ccccHHHHHHHHHhcCC--CCCcEEEeeeeeCCccEEEEecc-CCC
Q psy2769          10 VQRLFWERNFYEKLHGA--PGVPHVMGYGTSGDYNILVMELL-GPS   52 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~--~~i~~~~~~~~~~~~~~~v~e~~-~~~   52 (257)
                      ...+..|...++.|...  ..+++++.++...+..++|||++ |.+
T Consensus        72 ~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~  117 (312)
T 3jr1_A           72 RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK  117 (312)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence            45688999999999744  56899999988888899999999 654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.97  E-value=0.015  Score=46.72  Aligned_cols=31  Identities=19%  Similarity=0.478  Sum_probs=26.6

Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      ..+++|||+++.||+++.+   +.+.++||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~---~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGEN---EQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGG---GCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCC---CcEEEEehhhcc
Confidence            3679999999999999755   679999999774

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=95.76  E-value=0.033  Score=45.77  Aligned_cols=106  Identities=20%  Similarity=0.234  Sum_probs=65.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHH--------------HHHHHh-c------CCCC--
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLE--------------DLFQYC-S------KRFS--   65 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~--------------~~~~~~-~------~~~~--   65 (257)
                      ...+.+|..+++.|..+...+++++.+..    .+||||+ |.+|.              +.+... .      +...  
T Consensus        97 ~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l  172 (379)
T 3feg_A           97 VDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWL  172 (379)
T ss_dssp             HHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccH
Confidence            34567899999999877667888887764    2899998 64432              111111 1      1122  


Q ss_pred             HHHHHHHHHHHHH-------------------HHHHH----Hh----CCccccCCCCCceEeecc-CCCCeEEEEeCCcc
Q psy2769          66 LKTVLMLADQMIS-------------------RLEHV----HR----KKIVHRDIKPDNFLMGVR-ENFNTVYLVDFGLA  117 (257)
Q Consensus        66 ~~~~~~~~~~i~~-------------------~l~~l----h~----~~i~H~dl~~~nili~~~-~~~~~~~l~df~~~  117 (257)
                      ..++.++..++-.                   .+..|    ..    ..++|+|+.+.||+++.+ ...+.+.++||..+
T Consensus       173 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a  252 (379)
T 3feg_A          173 FGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS  252 (379)
T ss_dssp             HHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred             HHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence            2455555544322                   12222    22    258999999999999754 12357899999987


Q ss_pred             ee
Q psy2769         118 VD  119 (257)
Q Consensus       118 ~~  119 (257)
                      ..
T Consensus       253 ~~  254 (379)
T 3feg_A          253 SY  254 (379)
T ss_dssp             EE
T ss_pred             Cc
Confidence            53

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=94.64  E-value=0.028  Score=46.88  Aligned_cols=32  Identities=9%  Similarity=0.287  Sum_probs=27.1

Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      +...++|||+++.||+++.+   + +.++||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~---~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQD---S-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSS---C-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCC---C-CEEEeCccccc
Confidence            45679999999999999754   4 99999998765

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=92.60  E-value=0.045  Score=43.60  Aligned_cols=30  Identities=27%  Similarity=0.358  Sum_probs=24.8

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .+++|+|+++.||+++.+   +.+.++||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~---~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGD---ELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETT---EEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCC---ceEEEecchhcc
Confidence            468999999999999754   455899999774

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=91.02  E-value=0.19  Score=40.49  Aligned_cols=31  Identities=26%  Similarity=0.554  Sum_probs=26.4

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      .+++|+|+.+.||+++.+   +.+.++||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~---~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNE---ESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGG---GCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCC---CeEEEEECCCCee
Confidence            468999999999999765   6799999987754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=90.24  E-value=0.27  Score=39.16  Aligned_cols=29  Identities=24%  Similarity=0.225  Sum_probs=24.2

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      ..++|||+++.||+++ +    .+.++||+.+..
T Consensus       195 ~~l~HgD~~~~Nil~~-~----~~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D----GPMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGGEEES-S----SEEECCCTTCCE
T ss_pred             eeeeeCCCCcccEeEc-C----CCEEEECCCCCc
Confidence            4589999999999996 2    689999987754

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=88.82  E-value=0.16  Score=41.39  Aligned_cols=28  Identities=21%  Similarity=0.412  Sum_probs=23.3

Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      +++|+|+.+.||+++.    +.+.++||+.+.
T Consensus       213 ~l~HgDl~~~Nil~~~----~~~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTN----KCLRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC-----CEEECCCTTCE
T ss_pred             EEEeCCCCcccEEecC----CcEEEEEecCCC
Confidence            5899999999999864    348999998775

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=86.92  E-value=0.28  Score=41.33  Aligned_cols=35  Identities=14%  Similarity=0.025  Sum_probs=26.6

Q ss_pred             HHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCC
Q psy2769          14 FWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPS   52 (257)
Q Consensus        14 ~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~   52 (257)
                      .+|..++..|..+...+++++.+..    ..|++|+ |.+
T Consensus       152 ~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~  187 (458)
T 2qg7_A          152 EREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA  187 (458)
T ss_dssp             HHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred             HHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence            6899999999866556888887742    3599998 533

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=85.52  E-value=0.46  Score=39.21  Aligned_cols=32  Identities=22%  Similarity=0.333  Sum_probs=25.6

Q ss_pred             ccccCCCCCceEeecc---CCCCeEEEEeCCccee
Q psy2769          88 IVHRDIKPDNFLMGVR---ENFNTVYLVDFGLAVD  119 (257)
Q Consensus        88 i~H~dl~~~nili~~~---~~~~~~~l~df~~~~~  119 (257)
                      ++|+|+.+.||++..+   .....+.++||..+..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            6799999999999642   2346799999998854

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=83.83  E-value=0.41  Score=39.95  Aligned_cols=35  Identities=17%  Similarity=0.115  Sum_probs=26.9

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL   49 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~   49 (257)
                      +.+.+|..++..|..+...+++++.+..    .+|++|+
T Consensus       120 ~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l  154 (429)
T 1nw1_A          120 SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYI  154 (429)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCC
T ss_pred             HHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEe
Confidence            5677899999999866556888887642    3889998

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=82.59  E-value=2.7  Score=31.41  Aligned_cols=82  Identities=13%  Similarity=0.203  Sum_probs=55.4

Q ss_pred             CCCCCcEEEeeeeeCCccEEEEecc--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeec
Q psy2769          25 GAPGVPHVMGYGTSGDYNILVMELL--GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV  102 (257)
Q Consensus        25 ~~~~i~~~~~~~~~~~~~~~v~e~~--~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~  102 (257)
                      .+|+++.-+.  .+.+.+.+.++.-  +.++.. ++    .++....++++.+++.... -|...-+|--+.|+|++++.
T Consensus        48 ~~~~f~~~I~--~~eD~~~i~y~~~~~~~~f~~-i~----~~~~~eKlrll~nl~~L~~-~~~~~r~tf~l~P~NL~f~~  119 (219)
T 4ano_A           48 VDPCIVRDID--VSEDEVKVVIKPPSSFLTFAA-IR----KTTLLSRIRAAIHLVSKVK-HHSARRLIFIVCPENLMFNR  119 (219)
T ss_dssp             SCSSSEEEEE--ECSSEEEEEEECCTTCEEHHH-HH----TSCHHHHHHHHHHHHHHHS-SCCSSSEECCCCGGGEEECT
T ss_pred             cCCCCCeEEE--EeCCEEEEEEEcCcccCcHHH-HH----hcCHHHHHHHHHHHHHHHH-HhhhCceeEEEeCceEEEeC
Confidence            4788832233  5556666666664  444443 33    4788899998888877544 12244578899999999987


Q ss_pred             cCCCCeEEEEeCCcc
Q psy2769         103 RENFNTVYLVDFGLA  117 (257)
Q Consensus       103 ~~~~~~~~l~df~~~  117 (257)
                      +   +.+++.-.|.-
T Consensus       120 ~---~~p~i~hRGi~  131 (219)
T 4ano_A          120 A---LEPFFLHVGVK  131 (219)
T ss_dssp             T---CCEEESCCEET
T ss_pred             C---CcEEEEEcCCc
Confidence            7   88998777653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	257
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-57
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-52
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-25
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-24
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-23
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-23
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-23
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-22
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-21
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-21
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-21
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-21
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-20
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	9e-20
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-19
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-19
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-19
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-19
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-18
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-18
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-18
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-18
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-18
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-18
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-17
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-17
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-16
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-16
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	2e-16
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-16
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-16
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-16
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-16
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-15
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-15
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-15
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-15
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-15
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-15
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-15
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-14
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-14
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-14
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	9e-14
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-13
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-13
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-12
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-12
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-11
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-11
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-11
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-10
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-10
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	8e-08

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  182 bits (463), Expect = 2e-57
 Identities = 109/260 (41%), Positives = 158/260 (60%), Gaps = 7/260 (2%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K EP R+   +L  E   Y+ L G  G+P+V  +G  G +N+LV++LLGPSLEDL   C
Sbjct: 35  IKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLC 94

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENF--NTVYLVDFGLAV 118
            ++FS+KTV M A QM++R++ +H K +V+RDIKPDNFL+G   +   N +Y+VDFG+  
Sbjct: 95  GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 154

Query: 119 DF----CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQ 174
            +         P    + L+GTARY S+N H   +QS RDDLEAL +  +YFLRG LPWQ
Sbjct: 155 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 214

Query: 175 SIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR 234
            +K+   + + +R+ E K +     +C G P EF +++ Y R LAF   P+Y  L+  F 
Sbjct: 215 GLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274

Query: 235 NLLENKERCEFDLRYDWTLL 254
            +LE +     D  +DW LL
Sbjct: 275 KVLE-RLNTTEDENFDWNLL 293

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  170 bits (431), Expect = 2e-52
 Identities = 123/260 (47%), Positives = 175/260 (67%), Gaps = 5/260 (1%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           +K+E V+    +L  E   Y+ + G  G+P +   G  GDYN++VMELLGPSLEDLF +C
Sbjct: 37  IKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFC 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
           S++FSLKTVL+LADQMISR+E++H K  +HRD+KPDNFLMG+ +  N VY++DFGLA  +
Sbjct: 97  SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 156

Query: 121 CPN----CPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
                    P    + LTGTARYAS+N H  ++QS RDDLE+L Y L+YF  G LPWQ +
Sbjct: 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
           K+  +  + +R++E K++   E +C+G P EFA +L +CR L F ++P+Y  LR  FRNL
Sbjct: 217 KAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276

Query: 237 LENKERCEFDLRYDWTLLER 256
              ++   +D  +DW +L+ 
Sbjct: 277 FH-RQGFSYDYVFDWNMLKF 295

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 99.8 bits (248), Expect = 4e-25
 Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 11/212 (5%)

Query: 5   PVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKR 63
           P  +  + +  E      L   P + ++       +  +++ E + G  L +       +
Sbjct: 62  PHESDKETVRKEIQTMSVLRH-PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK 120

Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
            S    +    Q+   L H+H    VH D+KP+N +   + + N + L+DFGL     P 
Sbjct: 121 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS-NELKLIDFGLTAHLDPK 179

Query: 124 CPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEET 183
                  +  TGTA +A+    +        D+ ++       L G  P+     +N++ 
Sbjct: 180 Q----SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG---GENDDE 232

Query: 184 RMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
            ++ V      M  ++   G   +  +F+R  
Sbjct: 233 TLRNVKSCDWNM-DDSAFSGISEDGKDFIRKL 263

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 97.4 bits (242), Expect = 2e-24
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 11/206 (5%)

Query: 11  QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTV 69
             +  E +   +LH  P + ++          +L++E L G  L D       + S   V
Sbjct: 71  YTVKNEISIMNQLHH-PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEV 129

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
           +    Q    L+H+H   IVH DIKP+N +   ++  ++V ++DFGLA    P+      
Sbjct: 130 INYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA-SSVKIIDFGLATKLNPDE----I 184

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVT 189
            +  T TA +A+             D+ A+       L G  P+     +++   +Q V 
Sbjct: 185 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA---GEDDLETLQNVK 241

Query: 190 EMKLTMTPEAICEGTPPEFAEFLRYC 215
                   E       PE  +F++  
Sbjct: 242 RCDWEF-DEDAFSSVSPEAKDFIKNL 266

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 1e-23
 Identities = 49/237 (20%), Positives = 92/237 (38%), Gaps = 19/237 (8%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKT 68
           +Q    E     K      +   MGY T+     +V +   G SL         +F +  
Sbjct: 48  LQAFKNEVGVLRKTRH-VNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIK 105

Query: 69  VLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI 128
           ++ +A Q    ++++H K I+HRD+K +N    + E+   V + DFGLA           
Sbjct: 106 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIF--LHEDLT-VKIGDFGLATVKSRWSGSHQ 162

Query: 129 RTRGLTGTARYASVNAHQWLDQSPRD---DLEALCYTLVYFLRGKLPWQSIKSDNEETRM 185
             + L+G+  + +    +  D++P     D+ A    L   + G+LP+ +I  +N +  +
Sbjct: 163 FEQ-LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI--NNRDQII 219

Query: 186 QRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKER 242
             V    L+     +    P      +  C      ++      R  F  +L + E 
Sbjct: 220 FMVGRGYLSPDLSKVRSNCPKAMKRLMAEC----LKKKR---DERPLFPQILASIEL 269

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 1e-23
 Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 15/210 (7%)

Query: 7   RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFS 65
            N V  +  ER+   +L   P    +       +     +       L    +     F 
Sbjct: 49  ENKVPYVTRERDVMSRLDH-PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI-GSFD 106

Query: 66  LKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP 125
                    +++S LE++H K I+HRD+KP+N L+        + + DFG A        
Sbjct: 107 ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA-KVLSPES 162

Query: 126 PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRM 185
            + R     GTA+Y S             DL AL   +   + G  P++   + NE    
Sbjct: 163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR---AGNEYLIF 219

Query: 186 QRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
           Q++ +++    PE       P+  + +   
Sbjct: 220 QKIIKLEYDF-PEKF----FPKARDLVEKL 244

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 3e-23
 Identities = 44/249 (17%), Positives = 87/249 (34%), Gaps = 21/249 (8%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +K    +   + +  E     +L   P +  ++G   +    +LVME+  G  L      
Sbjct: 44  LKQGTEKADTEEMMREAQIMHQLDN-PYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVG 101

Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
             +   +  V  L  Q+   ++++  K  VHRD+   N L+    N +   + DFGL+  
Sbjct: 102 KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSKA 158

Query: 120 FCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKS 178
              +              ++ +     +   S R D+ +   T+   L  G+ P++    
Sbjct: 159 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK---K 215

Query: 179 DNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
                 M  + + K    P       PPE    +  C    +  +    + R  F  + +
Sbjct: 216 MKGPEVMAFIEQGKRMECPPEC----PPELYALMSDC----WIYKW---EDRPDFLTVEQ 264

Query: 239 NKERCEFDL 247
               C + L
Sbjct: 265 RMRACYYSL 273

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 5e-22
 Identities = 39/217 (17%), Positives = 82/217 (37%), Gaps = 12/217 (5%)

Query: 1   MKVEPVRNPVQRLFW-ERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQ 58
            K   V+   Q L   E +          + H+     S +  +++ E + G  + +   
Sbjct: 35  AKFVKVKGTDQVLVKKEISILNIARH-RNILHLHESFESMEELVMIFEFISGLDIFERIN 93

Query: 59  YCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
             +   + + ++    Q+   L+ +H   I H DI+P+N +   R + +T+ +++FG A 
Sbjct: 94  TSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRS-STIKIIEFGQAR 152

Query: 119 DFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKS 178
              P        R L     Y +   HQ    S   D+ +L   +   L G  P+    +
Sbjct: 153 QLKPGD----NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL---A 205

Query: 179 DNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
           +  +  ++ +   + T   E   +    E  +F+   
Sbjct: 206 ETNQQIIENIMNAEYTF-DEEAFKEISIEAMDFVDRL 241

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 3e-21
 Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 12/209 (5%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKT 68
           ++    E +        P +  ++      +   +++E   G +++ +     +  +   
Sbjct: 53  LEDYMVEIDILASCDH-PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ 111

Query: 69  VLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI 128
           + ++  Q +  L ++H  KI+HRD+K  N L         + L DFG++         R 
Sbjct: 112 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVSAKNTRTIQRRD 168

Query: 129 RTRGLTGTARYASVNAHQWLDQ--SPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQ 186
              G         V      D+    + D+ +L  TL+     + P       N    + 
Sbjct: 169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH---ELNPMRVLL 225

Query: 187 RVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
           ++ + +      A        F +FL+ C
Sbjct: 226 KIAKSEP--PTLAQPSRWSSNFKDFLKKC 252

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.5 bits (219), Expect = 3e-21
 Identities = 46/232 (19%), Positives = 76/232 (32%), Gaps = 27/232 (11%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
            Q +  E  F +KL   P      G         LVME    S  DL +   K      +
Sbjct: 59  WQDIIKEVRFLQKLRH-PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI 117

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
             +    +  L ++H   ++HRD+K  N L+        V L DFG A    P       
Sbjct: 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSASIMAP------- 167

Query: 130 TRGLTGTARYAS---VNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQ 186
                GT  + +   + A        + D+ +L  T +     K P     + N  + + 
Sbjct: 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF---NMNAMSALY 224

Query: 187 RVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
            + + +               F  F+  C      + P   + R +   LL+
Sbjct: 225 HIAQNESPALQSGHW---SEYFRNFVDSC----LQKIP---QDRPTSEVLLK 266

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 87.9 bits (217), Expect = 3e-21
 Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 16/222 (7%)

Query: 1   MKVEPVRNP--VQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSL 53
           ++ +  R+P    R   E      L+  P +  V   G +    G    +VME + G +L
Sbjct: 40  LRADLARDPSFYLRFRREAQNAAALNH-PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL 98

Query: 54  EDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVD 113
            D+        + K  + +       L   H+  I+HRD+KP N ++      N V ++D
Sbjct: 99  RDIVHTE-GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMD 154

Query: 114 FGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPW 173
           FG+A     +     +T  + GTA+Y S    +      R D+ +L   L   L G+ P+
Sbjct: 155 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 214

Query: 174 QSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
                       Q V E  +   P A  EG   +    +   
Sbjct: 215 TG--DSPVSVAYQHVREDPI--PPSARHEGLSADLDAVVLKA 252

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 4e-21
 Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 10/214 (4%)

Query: 8   NPVQRLFWERNFYEKLHGAPGVPHVMGYG----TSGDYNILVMELL-GPSLED-LFQYCS 61
               +   E   + +    P +  ++             ++VME L G  L   +     
Sbjct: 46  QDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD 105

Query: 62  KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFC 121
           + F+ +    +   +   ++++H   I HRD+KP+N L   +     + L DFG A +  
Sbjct: 106 QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 165

Query: 122 PNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
            +            T  Y +             D+ +L   +   L G  P+ S      
Sbjct: 166 SHNSLTTPCY----TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 221

Query: 182 ETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
              M+    M     P         E    +R  
Sbjct: 222 SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 255

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 85.5 bits (211), Expect = 3e-20
 Identities = 39/216 (18%), Positives = 81/216 (37%), Gaps = 11/216 (5%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +  + +      +  E     K+   P +  +     SG +  L+M+L+ G  L D    
Sbjct: 42  IAKKALEGKEGSMENEIAVLHKIKH-PNIVALDDIYESGGHLYLIMQLVSGGELFDRIV- 99

Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
               ++ +    L  Q++  ++++H   IVHRD+KP+N L    +  + + + DFGL+  
Sbjct: 100 EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 159

Query: 120 FCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSD 179
             P            GT  Y +         S   D  ++       L G  P+     +
Sbjct: 160 EDPGS----VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY---DE 212

Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
           N+    +++ + +         +       +F+R+ 
Sbjct: 213 NDAKLFEQILKAEYEFDSP-YWDDISDSAKDFIRHL 247

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.6 bits (209), Expect = 4e-20
 Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 17/206 (8%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
             +L  E      L   P +  + GY        L++E               +F  +  
Sbjct: 50  EHQLRREVEIQSHLRH-PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRT 108

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
                ++ + L + H K+++HRDIKP+N L+G   +   + + DFG +V       P  R
Sbjct: 109 ATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVHA-----PSSR 160

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVT 189
              L GT  Y      +      + DL +L      FL GK P++   ++  +   +R++
Sbjct: 161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE---ANTYQETYKRIS 217

Query: 190 EMKLTMTPEAICEGTPPEFAEFLRYC 215
            ++ T  P+ +         + +   
Sbjct: 218 RVEFTF-PDFV----TEGARDLISRL 238

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 9e-20
 Identities = 45/228 (19%), Positives = 85/228 (37%), Gaps = 12/228 (5%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           + +E       ++  E     + +  P +    G   S     + ME + G SL+ + + 
Sbjct: 39  IHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 97

Query: 60  CSKRFSLKTVLMLADQMISRLEHVH-RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
            + R   + +  ++  +I  L ++  + KI+HRD+KP N L+    +   + L DFG++ 
Sbjct: 98  -AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSG 153

Query: 119 DFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKS 178
               +           GT  Y S    Q    S + D+ ++  +LV    G+ P     +
Sbjct: 154 QLIDS-----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 208

Query: 179 DNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNY 226
              E       E     TP        P  +  +     +A  E  +Y
Sbjct: 209 KELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDY 256

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 83.6 bits (206), Expect = 1e-19
 Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 13/219 (5%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
              E V+   +    E +   K+ G P +  +     +  +  LV +L+     +LF Y 
Sbjct: 44  FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLM--KKGELFDYL 101

Query: 61  SKR--FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV 118
           +++   S K    +   ++  +  +H+  IVHRD+KP+N L+    +   + L DFG + 
Sbjct: 102 TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSC 158

Query: 119 DFCPNCPPR--IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSI 176
              P    R    T                        D+ +    +   L G  P+   
Sbjct: 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW-- 216

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
               +   ++ +             +       + +   
Sbjct: 217 -HRKQMLMLRMIMSGNYQFGSP-EWDDYSDTVKDLVSRF 253

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.7 bits (206), Expect = 1e-19
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 18/230 (7%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
           +     E N    L     +  + G   +    ++       SL D  +     F L T+
Sbjct: 55  MDDFIREVNAMHSLDH-RNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
              A Q+   + ++  K+ +HRD+   N L+  R   + V + DFGL      N    + 
Sbjct: 114 SRYAVQVAEGMGYLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVM 170

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKSDNEETRMQRV 188
                    + +  + +    S   D      TL      G+ PW      N    + ++
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI---GLNGSQILHKI 227

Query: 189 TEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
            +    +     C   P +    +  C    ++ +P   + R +F  L +
Sbjct: 228 DKEGERLPRPEDC---PQDIYNVMVQC----WAHKP---EDRPTFVALRD 267

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 1e-19
 Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 11/216 (5%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
           + ++   +  + +  E    + L+    V    G+   G+   L +E             
Sbjct: 38  VDMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP 96

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
                         Q+++ + ++H   I HRDIKP+N L+   +  + + + DFGLA  F
Sbjct: 97  DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVF 153

Query: 121 CPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYFLRGKLPWQSIKSD 179
             N   R+  + + GT  Y +    +  +  +   D+ +    L   L G+LPW     D
Sbjct: 154 RYNNRERLLNK-MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW-----D 207

Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
                 Q  ++ K   T     +         L   
Sbjct: 208 QPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 243

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 2e-19
 Identities = 43/210 (20%), Positives = 71/210 (33%), Gaps = 16/210 (7%)

Query: 7   RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFS 65
            + V+    E+         P + H+     + +    VME L G  L    Q C  +F 
Sbjct: 43  DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFD 101

Query: 66  LKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCP 125
           L      A ++I  L+ +H K IV+RD+K DN L+        + + DFG+  +      
Sbjct: 102 LSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCKEN---ML 155

Query: 126 PRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRM 185
              +T    GT  Y +         +   D  +    L   L G+ P+      +EE   
Sbjct: 156 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH---GQDEEELF 212

Query: 186 QRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
             +                  E  + L   
Sbjct: 213 HSIRMDNPF-----YPRWLEKEAKDLLVKL 237

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 6e-19
 Identities = 40/251 (15%), Positives = 87/251 (34%), Gaps = 21/251 (8%)

Query: 7   RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSL 66
           ++ V     E    +             + T      ++    G  L        + F+ 
Sbjct: 46  KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE-RVFTE 104

Query: 67  KTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP 126
           +       +++S LE++H + +V+RDIK +N ++   +    + + DFGL  +   +   
Sbjct: 105 ERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA- 160

Query: 127 RIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQ 186
               +   GT  Y +    +  D     D   L   +   + G+LP+    + + E   +
Sbjct: 161 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY---NQDHERLFE 215

Query: 187 RVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFD 246
            +   ++            PE    L     L    +   G      + ++E++    F 
Sbjct: 216 LILMEEIRFPRTL-----SPEAKSLLAGL--LKKDPKQRLGGGPSDAKEVMEHR----FF 264

Query: 247 LRYDWTLLERK 257
           L  +W  + +K
Sbjct: 265 LSINWQDVVQK 275

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 1e-18
 Identities = 43/207 (20%), Positives = 76/207 (36%), Gaps = 15/207 (7%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKT 68
            + +  E     +    P + + +     GD   +VME L G SL D+            
Sbjct: 61  KELIINEILVMRENKN-PNIVNYLDSYLVGDELWVVMEYLAGGSLTDV--VTETCMDEGQ 117

Query: 69  VLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI 128
           +  +  + +  LE +H  +++HRDIK DN L+G      +V L DFG      P      
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQS--- 171

Query: 129 RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRV 188
           +   + GT  + +          P+ D+ +L    +  + G+ P+ +   +         
Sbjct: 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN--ENPLRALYLIA 229

Query: 189 TEMKLTMTPEAICEGTPPEFAEFLRYC 215
           T     +      E     F +FL  C
Sbjct: 230 TNGTPELQ---NPEKLSAIFRDFLNRC 253

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.3 bits (200), Expect = 2e-18
 Identities = 47/232 (20%), Positives = 82/232 (35%), Gaps = 20/232 (8%)

Query: 27  PGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK 86
           P +  +     + D    +++L+              FS   +   A ++I  LEH+H +
Sbjct: 67  PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 126

Query: 87  KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ 146
            +V+RD+KP N L+   +    V + D GLA DF        +     GT  Y +    Q
Sbjct: 127 FVVYRDLKPANILL---DEHGHVRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQ 178

Query: 147 -WLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTP 205
             +      D  +L   L   LRG  P+        +T+ +   +         + +   
Sbjct: 179 KGVAYDSSADWFSLGCMLFKLLRGHSPF-----RQHKTKDKHEIDRMTLTMAVELPDSFS 233

Query: 206 PEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRYDWTLLERK 257
           PE    L     L        G L    + + E+     F    DW ++  +
Sbjct: 234 PELRSLLEGL--LQRDVNRRLGCLGRGAQEVKESP----FFRSLDWQMVFLQ 279

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.5 bits (198), Expect = 2e-18
 Identities = 41/248 (16%), Positives = 81/248 (32%), Gaps = 24/248 (9%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
           V+    ER     +   P +  + G         ++M+ +           S+RF     
Sbjct: 48  VEHTNDERLMLSIVTH-PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA 106

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
              A ++   LE++H K I++RD+KP+N L+   +    + + DFG A            
Sbjct: 107 KFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDVT----- 158

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVT 189
              L GT  Y +         +   D  +    +   L G  P+      N     +++ 
Sbjct: 159 -YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY---DSNTMKTYEKIL 214

Query: 190 EMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRY 249
             +L   P         +  + L     +        G L++   ++  +     +    
Sbjct: 215 NAELRFPPFF-----NEDVKDLLSRL--ITRDLSQRLGNLQNGTEDVKNHP----WFKEV 263

Query: 250 DWTLLERK 257
            W  L  +
Sbjct: 264 VWEKLLSR 271

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 2e-18
 Identities = 41/242 (16%), Positives = 84/242 (34%), Gaps = 14/242 (5%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
            K     +  ++   E     +    P +  ++G  T     I++       L    Q  
Sbjct: 43  CKNCTSDSVREKFLQEALTMRQFDH-PHIVKLIGVITENPVWIIMELCTLGELRSFLQVR 101

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
                L ++++ A Q+ + L ++  K+ VHRDI   N L+    + + V L DFGL+   
Sbjct: 102 KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYM 158

Query: 121 CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKSD 179
             +     +        ++ +  +  +   +   D+      +   L  G  P+Q     
Sbjct: 159 EDS--TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ---GV 213

Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN 239
                + R+   +    P       PP     +  C     S  P + +L+     +LE 
Sbjct: 214 KNNDVIGRIENGERLPMPPNC----PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 269

Query: 240 KE 241
           ++
Sbjct: 270 EK 271

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 5e-18
 Identities = 50/243 (20%), Positives = 92/243 (37%), Gaps = 28/243 (11%)

Query: 11  QRLFWERNFYEKL-HGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKR--FSLK 67
            R+  E    +K+  G  GV  ++ +    D  +L++E   P   DLF + ++R     +
Sbjct: 52  TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ-DLFDFITERGALQEE 110

Query: 68  TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR 127
                  Q++  + H H   ++HRDIK +N L  +  N   + L+DFG            
Sbjct: 111 LARSFFWQVLEAVRHCHNCGVLHRDIKDENIL--IDLNRGELKLIDFGSGALLKDTV--- 165

Query: 128 IRTRGLTGTARYASV-NAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQ 186
                  GT  Y+                + +L   L   + G +P++    D E  R Q
Sbjct: 166 --YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE---HDEEIIRGQ 220

Query: 187 RVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDS--FRNLLENKERCE 244
                          +    E    +R+C  L  S+ P + ++++    +++L  +E  E
Sbjct: 221 VF-----------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269

Query: 245 FDL 247
             L
Sbjct: 270 IHL 272

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 6e-18
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 13/207 (6%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
              L  E N  ++L   P +  ++G   +  + +LVME+      + +   ++    K +
Sbjct: 52  KDELLAEANVMQQLD-NPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNI 109

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
           + L  Q+   ++++     VHRD+   N L+      +   + DFGL+     +      
Sbjct: 110 IELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKA 166

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKSDNEETRMQRV 188
                   ++ +     +   S + D+ +    +      G+ P++ +K       +++ 
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 226

Query: 189 TEMKLTMTPEAICEGTPPEFAEFLRYC 215
             M           G P E  + +  C
Sbjct: 227 ERMG-------CPAGCPREMYDLMNLC 246

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.3 bits (192), Expect = 1e-17
 Identities = 40/243 (16%), Positives = 89/243 (36%), Gaps = 15/243 (6%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +K        +    E +   +    P V H+ G  T     +++ E +   SL+   + 
Sbjct: 62  LKSGYTEKQRRDFLSEASIMGQFDH-PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 120

Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
              +F++  ++ +   + + ++++     VHRD+   N L  V  N     + DFGL+  
Sbjct: 121 NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNIL--VNSNLV-CKVSDFGLSRF 177

Query: 120 FCPN--CPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSI 176
              +   P      G     R+ +  A Q+   +   D+ +    +   +  G+ P+   
Sbjct: 178 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW-- 235

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
             D     +    E    + P   C   P    + +  C     +  P +G++ ++   +
Sbjct: 236 --DMTNQDVINAIEQDYRLPPPMDC---PSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 290

Query: 237 LEN 239
           + N
Sbjct: 291 IRN 293

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.1 bits (189), Expect = 4e-17
 Identities = 42/262 (16%), Positives = 86/262 (32%), Gaps = 41/262 (15%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +K +   +  + L  E     +L     + +++G  T      L+ E      L +  + 
Sbjct: 75  LKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 134

Query: 60  CSKRFS----------------------LKTVLMLADQMISRLEHVHRKKIVHRDIKPDN 97
             ++FS                       + +L  A Q+   +E +  K  VHRD+   N
Sbjct: 135 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 194

Query: 98  FLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE 157
            L+    +   V + DFGLA D   +    +R        ++ +  +      + + D+ 
Sbjct: 195 VLV---THGKVVKICDFGLARDIMSDSNYVVRG-NARLPVKWMAPESLFEGIYTIKSDVW 250

Query: 158 ALCYTLVYFL-RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCR 216
           +    L      G  P+        +    ++ +    M           E    ++ C 
Sbjct: 251 SYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKMDQPFYA---TEEIYIIMQSC- 303

Query: 217 GLAFSEEPNYGKLRDSFRNLLE 238
              ++ +    + R SF NL  
Sbjct: 304 ---WAFDS---RKRPSFPNLTS 319

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 1e-16
 Identities = 36/215 (16%), Positives = 76/215 (35%), Gaps = 21/215 (9%)

Query: 27  PGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR 85
             +  + G  T      ++ E +    L +  +    RF  + +L +   +   +E++  
Sbjct: 59  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 118

Query: 86  KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH 145
           K+ +HRD+   N L  V +    V + DFGL+     +      + G     R++     
Sbjct: 119 KQFLHRDLAARNCL--VNDQGV-VKVSDFGLSRYVLDD--EYTSSVGSKFPVRWSPPEVL 173

Query: 146 QWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
            +   S + D+ A    +      GK+P++           + + +      P       
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYE---RFTNSETAEHIAQGLRLYRPHLA---- 226

Query: 205 PPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN 239
             +    +  C    + E+      R +F+ LL N
Sbjct: 227 SEKVYTIMYSC----WHEKA---DERPTFKILLSN 254

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.6 bits (183), Expect = 2e-16
 Identities = 42/222 (18%), Positives = 79/222 (35%), Gaps = 24/222 (10%)

Query: 2   KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELLGPSLEDLF 57
             +  ++  QR   E    + L   P +        S        +LV EL+       +
Sbjct: 44  DRKLTKSERQRFKEEAEMLKGLQH-PNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTY 102

Query: 58  QYCSKRFSLKTVLMLADQMISRLEHVHRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFG 115
               K   +K +     Q++  L+ +H +   I+HRD+K DN    +     +V + D G
Sbjct: 103 LKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF--ITGPTGSVKIGDLG 160

Query: 116 LAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ--SPRDDLEALCYTLVYFLRGKLPW 173
           LA     +       + + GT  +    A +  ++      D+ A    ++     + P+
Sbjct: 161 LATLKRAS-----FAKAVIGTPEFM---APEMYEEKYDESVDVYAFGMCMLEMATSEYPY 212

Query: 174 QSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
              +  N     +RVT       P +  +   PE  E +  C
Sbjct: 213 S--ECQNAAQIYRRVTSGVK---PASFDKVAIPEVKEIIEGC 249

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.7 bits (183), Expect = 2e-16
 Identities = 37/239 (15%), Positives = 84/239 (35%), Gaps = 22/239 (9%)

Query: 2   KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL--GPSLEDLFQY 59
            ++           E N  ++L     +  +    T      ++ E +  G  ++ L   
Sbjct: 44  SLKQGSMSPDAFLAEANLMKQLQH-QRLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTP 101

Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
              + ++  +L +A Q+   +  +  +  +HRD++  N L+    +  +  + DFGLA  
Sbjct: 102 SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARL 158

Query: 120 FCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSD 179
              N        G     ++ +  A  +   + + D+ +    L   +          ++
Sbjct: 159 IEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN 216

Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
            E   +Q +      + P+      P E  + +R C    + E P   + R +F  L  
Sbjct: 217 PE--VIQNLERGYRMVRPDNC----PEELYQLMRLC----WKERP---EDRPTFDYLRS 262

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 2e-16
 Identities = 47/250 (18%), Positives = 91/250 (36%), Gaps = 17/250 (6%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
            +    ER   E +  +P +  +     +     L+++ +            +RF+   V
Sbjct: 72  TEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEV 131

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
            +   +++  LEH+H+  I++RDIK +N L+    +   V L DFGL+ +F  +     R
Sbjct: 132 QIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSKEFVADETE--R 186

Query: 130 TRGLTGTARYASVNAHQWLDQ--SPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQR 187
                GT  Y + +  +  D       D  +L   +   L G  P+     D E+     
Sbjct: 187 AYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT---VDGEKNSQAE 243

Query: 188 VTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDL 247
           ++   L   P    +       + ++    L    +   G        + E+     F  
Sbjct: 244 ISRRILKSEPP-YPQEMSALAKDLIQRL--LMKDPKKRLGCGPRDADEIKEHL----FFQ 296

Query: 248 RYDWTLLERK 257
           + +W  L  K
Sbjct: 297 KINWDDLAAK 306

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 3e-16
 Identities = 35/261 (13%), Positives = 81/261 (31%), Gaps = 34/261 (13%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDL--- 56
           +K        + L  E      L     + +++G  T G   +++ E      L +    
Sbjct: 61  LKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 120

Query: 57  --------------FQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGV 102
                          +       L+ +L  + Q+   +  +  K  +HRD+   N L   
Sbjct: 121 KRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL--- 177

Query: 103 RENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT 162
             +     + DFGLA     N    +         ++ +  +      +   D+ +    
Sbjct: 178 LTHGRITKICDFGLAR-DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 236

Query: 163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSE 222
           L                  +++  ++ +    M      E  P E  + ++ C    +  
Sbjct: 237 LWELFSLGSSPYP--GMPVDSKFYKMIKEGFRML---SPEHAPAEMYDIMKTC----WDA 287

Query: 223 EPNYGKLRDSFRNLLENKERC 243
           +P     R +F+ +++  E+ 
Sbjct: 288 DP---LKRPTFKQIVQLIEKQ 305

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 3e-16
 Identities = 50/240 (20%), Positives = 85/240 (35%), Gaps = 30/240 (12%)

Query: 10  VQRLFWERNFYEKLHGAPGVP-HVMGYGTSGDYNILVMELL-GPSLEDLFQYCSK---RF 64
            Q L  E N   +L     V  +      +     +VME   G  L  +    +K     
Sbjct: 47  KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 106

Query: 65  SLKTVLMLADQMISRLEHVHRK-----KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
             + VL +  Q+   L+  HR+      ++HRD+KP N  +  ++N   V L DFGLA  
Sbjct: 107 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARI 163

Query: 120 FCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSD 179
              +       +   GT  Y S      +  + + D+ +L   L        P+    + 
Sbjct: 164 LNHDTS---FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AF 217

Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN 239
           +++    ++ E K    P         E  E +        + +      R S   +LEN
Sbjct: 218 SQKELAGKIREGKFRRIPYRY----SDELNEIITRM----LNLKD---YHRPSVEEILEN 266

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.1 bits (181), Expect = 7e-16
 Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 12/214 (5%)

Query: 28  GVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSK---RFSLKTVLMLADQMISRLEHVH 84
              +  G      Y  LV++ +  ++  + ++ S+      +  V +   Q+   L ++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139

Query: 85  RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA 144
              I HRDIKP N    +  +   + L DFG A       P              A    
Sbjct: 140 SFGICHRDIKPQNL--LLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRAPELI 194

Query: 145 HQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGT 204
               D +   D+ +    L   L G+  +     D+   ++  + ++  T T E I E  
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFP---GDSGVDQLVEIIKVLGTPTREQIREMN 251

Query: 205 PPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
           P          +   +++     +       L  
Sbjct: 252 PNYTEFKFPQIKAHPWTKVFR-PRTPPEAIALCS 284

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 7e-16
 Identities = 35/238 (14%), Positives = 80/238 (33%), Gaps = 20/238 (8%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
            + +  E      +   P V  ++G   +    ++   +    L D  +        + +
Sbjct: 55  NKEILDEAYVMASVDN-PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYL 113

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
           L    Q+   + ++  +++VHRD+   N L  V+   + V + DFGLA            
Sbjct: 114 LNWCVQIAKGMNYLEDRRLVHRDLAARNVL--VKTPQH-VKITDFGLAKLLGAE-EKEYH 169

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKSDNEETRMQRV 188
             G     ++ ++ +      + + D+ +   T+   +  G  P+         + +  +
Sbjct: 170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD----GIPASEISSI 225

Query: 189 TEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFD 246
            E    +    IC     +    +  C    +  +      R  FR L+    +   D
Sbjct: 226 LEKGERLPQPPIC---TIDVYMIMVKC----WMIDA---DSRPKFRELIIEFSKMARD 273

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 9e-16
 Identities = 40/259 (15%), Positives = 89/259 (34%), Gaps = 31/259 (11%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           MK    ++  +    E     KL   P + +++G      Y  L +E     +L D  + 
Sbjct: 45  MKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 104

Query: 60  C---------------SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRE 104
                           +   S + +L  A  +   ++++ +K+ +HRD+   N L+G   
Sbjct: 105 SRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG--- 161

Query: 105 NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV 164
                 + DFGL+           +        R+ ++ +  +   +   D+ +    L 
Sbjct: 162 ENYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 217

Query: 165 YFL-RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEE 223
             +  G  P+            +++ +      P         E  + +R C      E 
Sbjct: 218 EIVSLGGTPYC---GMTCAELYEKLPQGYRLEKPLNC----DDEVYDLMRQCWREKPYER 270

Query: 224 PNYGKLRDSFRNLLENKER 242
           P++ ++  S   +LE ++ 
Sbjct: 271 PSFAQILVSLNRMLEERKT 289

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 1e-15
 Identities = 34/244 (13%), Positives = 82/244 (33%), Gaps = 18/244 (7%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +K             E     +      +  + G  +     +++ E +   +L+   + 
Sbjct: 44  LKAGYTEKQRVDFLGEAGIMGQFSH-HNIIRLEGVISKYKPMMIITEYMENGALDKFLRE 102

Query: 60  CSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD 119
               FS+  ++ +   + + ++++     VHRD+   N L  V  N     + DFGL+  
Sbjct: 103 KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNIL--VNSNLV-CKVSDFGLSRV 159

Query: 120 FCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSD 179
              +      T G     R+ +  A  +   +   D+ +    +   +          S+
Sbjct: 160 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN 219

Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN 239
           +E   M+ + +     TP       P    + +  C    + +E      R  F +++  
Sbjct: 220 HE--VMKAINDGFRLPTPMDC----PSAIYQLMMQC----WQQER---ARRPKFADIVSI 266

Query: 240 KERC 243
            ++ 
Sbjct: 267 LDKL 270

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 1e-15
 Identities = 35/216 (16%), Positives = 79/216 (36%), Gaps = 10/216 (4%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC 60
            K        + +  E +  +++   P V  +     +    IL++EL+       F   
Sbjct: 48  TKSSRRGVSREDIEREVSILKEIQH-PNVITLHEVYENKTDVILILELVAGGELFDFLAE 106

Query: 61  SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFN-TVYLVDFGLAVD 119
            +  + +       Q+++ + ++H  +I H D+KP+N ++  R      + ++DFGLA  
Sbjct: 107 KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK 166

Query: 120 FCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSD 179
                      + + GT  + +     +       D+ ++       L G  P+     D
Sbjct: 167 IDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL---GD 219

Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
            ++  +  V+ +      E     T     +F+R  
Sbjct: 220 TKQETLANVSAVNYEFEDE-YFSNTSALAKDFIRRL 254

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.3 bits (179), Expect = 1e-15
 Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 24/248 (9%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
           ++    E+   + ++  P +  +           +VME +             RFS    
Sbjct: 85  IEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA 143

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
              A Q++   E++H   +++RD+KP+N L+  +     + + DFG A            
Sbjct: 144 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRT----- 195

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVT 189
              L GT    +         +   D  AL   +     G  P+    +D      +++ 
Sbjct: 196 -WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFF---ADQPIQIYEKIV 251

Query: 190 EMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFDLRY 249
             K+             +  + LR    L       +G L++   ++  +K    +    
Sbjct: 252 SGKVRFPSHF-----SSDLKDLLRNL--LQVDLTKRFGNLKNGVNDIKNHK----WFATT 300

Query: 250 DWTLLERK 257
           DW  + ++
Sbjct: 301 DWIAIYQR 308

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 1e-15
 Identities = 39/260 (15%), Positives = 85/260 (32%), Gaps = 35/260 (13%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +K +     +  L  E    + +     + +++G  T      +++E     +L +  Q 
Sbjct: 53  LKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA 112

Query: 60  C---------------SKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRE 104
                            ++ S K ++  A Q+   +E++  KK +HRD+   N L+    
Sbjct: 113 RRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---- 168

Query: 105 NFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV 164
             + V  +          +     +T       ++ +  A      + + D+ +    L 
Sbjct: 169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 228

Query: 165 YFL-RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEE 223
                G  P+        E   + + E      P         E    +R C    +   
Sbjct: 229 EIFTLGGSPYP---GVPVEELFKLLKEGHRMDKPSNC----TNELYMMMRDC----WHAV 277

Query: 224 PNYGKLRDSFRNLLENKERC 243
           P     R +F+ L+E+ +R 
Sbjct: 278 P---SQRPTFKQLVEDLDRI 294

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 2e-15
 Identities = 42/208 (20%), Positives = 72/208 (34%), Gaps = 10/208 (4%)

Query: 35  YGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIK 94
           Y        LV +     L  L      +F+L  +  +   +++ L ++HR KI+HRD+K
Sbjct: 85  YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK 144

Query: 95  PDNFLMGVRENFNTVYLVDFGLAVDFCPN-CPPRIRTRGLTGTARYASVNAHQ-WLDQSP 152
             N L+        + L DFGLA  F         R      T  Y          D  P
Sbjct: 145 AANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP 201

Query: 153 RDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFL 212
             DL      +          Q    + E+ ++  ++++  ++TPE        E  E L
Sbjct: 202 PIDLWGAGCIMAEMWTRSPIMQ---GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKL 258

Query: 213 RYCRGLAFSEEPNYGKLRDS--FRNLLE 238
              +G     +             +L++
Sbjct: 259 ELVKGQKRKVKDRLKAYVRDPYALDLID 286

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.2 bits (176), Expect = 2e-15
 Identities = 44/262 (16%), Positives = 80/262 (30%), Gaps = 35/262 (13%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQY 59
           +K E   +       E     +      V   +G    G    L+ E +    L +  + 
Sbjct: 51  LKEEASADMQADFQREAALMAEFDNPNIVKL-LGVCAVGKPMCLLFEYMAYGDLNEFLRS 109

Query: 60  CSKR-----------------------FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPD 96
            S                          S    L +A Q+ + + ++  +K VHRD+   
Sbjct: 110 MSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 169

Query: 97  NFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDL 156
           N L  V EN   V + DFGL+ +       +          R+    +  +   +   D+
Sbjct: 170 NCL--VGENMV-VKIADFGLSRNIYSADYYKADGND-AIPIRWMPPESIFYNRYTTESDV 225

Query: 157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCR 216
            A    L       L          E  +  V +  +   PE      P E    +R C 
Sbjct: 226 WAYGVVLWEIFSYGLQPYY--GMAHEEVIYYVRDGNILACPENC----PLELYNLMRLCW 279

Query: 217 GLAFSEEPNYGKLRDSFRNLLE 238
               ++ P++  +    + + E
Sbjct: 280 SKLPADRPSFCSIHRILQRMCE 301

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 72.2 bits (176), Expect = 2e-15
 Identities = 36/236 (15%), Positives = 76/236 (32%), Gaps = 15/236 (6%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
            +++  E    E L G P +  +             +     +  D  Q   +  +   +
Sbjct: 73  KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-QTLTDYDI 131

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
                +++  L++ H   I+HRD+KP N +  +      + L+D+GLA  + P     +R
Sbjct: 132 RFYMYEILKALDYCHSMGIMHRDVKPHNVM--IDHEHRKLRLIDWGLAEFYHPGQEYNVR 189

Query: 130 TRGLTGTARYASVNAHQ-WLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRV 188
                 +  +        +       D+ +L   L   +  K P+     DN +  ++  
Sbjct: 190 ----VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH-GHDNYDQLVRIA 244

Query: 189 TEMKLTMTPEAICEGTPPEFAEFLRYC------RGLAFSEEPNYGKLRDSFRNLLE 238
             +      + I +        F          R   F    N   +     + L+
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD 300

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 4e-15
 Identities = 38/215 (17%), Positives = 72/215 (33%), Gaps = 13/215 (6%)

Query: 2   KVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCS 61
            ++P     +    E    +KL     +  +    +     I+   +   SL D  +  +
Sbjct: 48  TLKPGTMSPEAFLQEAQVMKKLRH-EKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGET 106

Query: 62  -KRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
            K   L  ++ +A Q+ S + +V R   VHRD++  N L+G  EN     + DFGLA   
Sbjct: 107 GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG--ENLV-CKVADFGLARLI 163

Query: 121 CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDN 180
             N       +G     ++ +  A  +   + + D+ +    L                 
Sbjct: 164 EDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYP--GMV 219

Query: 181 EETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYC 215
               + +V        P       P    + +  C
Sbjct: 220 NREVLDQVERGYRMPCPPEC----PESLHDLMCQC 250

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 5e-15
 Identities = 37/231 (16%), Positives = 83/231 (35%), Gaps = 18/231 (7%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKT 68
           V +   E    +       +  +     S    ++V+  +    L +  +  +   ++K 
Sbjct: 72  VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 131

Query: 69  VLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI 128
           ++    Q+   ++ +  KK VHRD+   N ++   +   TV + DFGLA D        +
Sbjct: 132 LIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSV 188

Query: 129 RTR-GLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQR 187
             + G     ++ ++ + Q    + + D+ +    L   +    P       N       
Sbjct: 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP--DVNTFDITVY 246

Query: 188 VTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
           + + +  + PE      P    E +  C    +  +    ++R SF  L+ 
Sbjct: 247 LLQGRRLLQPEYC----PDPLYEVMLKC----WHPKA---EMRPSFSELVS 286

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (172), Expect = 9e-15
 Identities = 36/236 (15%), Positives = 75/236 (31%), Gaps = 16/236 (6%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYN-----ILVMELLGPSLEDLFQYCSKRF 64
            QR   E     +      +  +     +          LV  L+G  L  L +  ++  
Sbjct: 50  CQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK--TQHL 106

Query: 65  SLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNC 124
           S   +     Q++  L+++H   ++HRD+KP N L+        + + DFGLA    P+ 
Sbjct: 107 SNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVADPDH 163

Query: 125 PPRIRTRGLTGTARYASVN-AHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEET 183
                      T  Y +          +   D+ ++   L   L  +  +      +   
Sbjct: 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP---GKHYLD 220

Query: 184 RMQRVTEMKLTMTPEAI-CEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
           ++  +  +  + + E + C          L             +        +LL+
Sbjct: 221 QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLD 276

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 1e-14
 Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 11/229 (4%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
            +    E    ++L   P +  ++          LV + +   LE + +  S   +   +
Sbjct: 44  NRTALREIKLLQELSH-PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHI 102

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
                  +  LE++H+  I+HRD+KP+N L+   +    + L DFGLA  F         
Sbjct: 103 KAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTH 159

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVT 189
                     A              D+ A+   L   L           D++  ++ R+ 
Sbjct: 160 QVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLP---GDSDLDQLTRIF 214

Query: 190 EMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
           E   T T E   +          +   G+      +     D   +L++
Sbjct: 215 ETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFS--AAGDDLLDLIQ 261

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 2e-14
 Identities = 37/231 (16%), Positives = 82/231 (35%), Gaps = 15/231 (6%)

Query: 11  QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTV 69
           +    E     KL   P +  + G         LV E +    L D  +     F+ +T+
Sbjct: 45  EDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 103

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
           L +   +   + ++    ++HRD+   N L  V EN   + + DFG+      +      
Sbjct: 104 LGMCLDVCEGMAYLEEACVIHRDLAARNCL--VGENQV-IKVSDFGMTRFVLDD--QYTS 158

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKSDNEETRMQRV 188
           + G     ++AS     +   S + D+ +    +      GK+P++   + +    ++ +
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE---NRSNSEVVEDI 215

Query: 189 TEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLEN 239
           +       P            + + +C      + P + +L      + E+
Sbjct: 216 STGFRLYKPRLA----STHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.0 bits (168), Expect = 2e-14
 Identities = 45/234 (19%), Positives = 91/234 (38%), Gaps = 14/234 (5%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL--GPSLEDLFQYCSKRFSLK 67
           V+    E    +++   P +  ++G  T      ++ E +  G  L+ L +   +  S  
Sbjct: 57  VEEFLKEAAVMKEIKH-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 115

Query: 68  TVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR 127
            +L +A Q+ S +E++ +K  +HRD+   N L  V EN   V + DFGL+     +    
Sbjct: 116 VLLYMATQISSAMEYLEKKNFIHRDLAARNCL--VGENHL-VKVADFGLSRLMTGD--TY 170

Query: 128 IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQR 187
               G     ++ +  +  +   S + D+ A    L       +             + +
Sbjct: 171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP------YPGIDLSQ 224

Query: 188 VTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE 241
           V E+          EG P +  E +R C     S+ P++ ++  +F  + +   
Sbjct: 225 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 278

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 4e-14
 Identities = 43/246 (17%), Positives = 81/246 (32%), Gaps = 28/246 (11%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNI-LVMELL-GPSLED-LF 57
           +K        Q    E +   +L     +  ++G        + +V E +   SL D L 
Sbjct: 35  VKCIKNDATAQAFLAEASVMTQLRH-SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR 93

Query: 58  QYCSKRFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLA 117
                      +L  +  +   +E++     VHRD+   N L+      N   + DFGL 
Sbjct: 94  SRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT 150

Query: 118 VDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSI 176
            +                  ++ +  A +    S + D+ +    L      G++P+   
Sbjct: 151 KEASST------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYP-- 202

Query: 177 KSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL 236
                +  + RV +      P+      PP   E ++ C    +  +     +R SF  L
Sbjct: 203 -RIPLKDVVPRVEKGYKMDAPDGC----PPAVYEVMKNC----WHLDA---AMRPSFLQL 250

Query: 237 LENKER 242
            E  E 
Sbjct: 251 REQLEH 256

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.3 bits (163), Expect = 9e-14
 Identities = 43/230 (18%), Positives = 77/230 (33%), Gaps = 11/230 (4%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
                 E    ++L     +  +     S     LV E     L+  F  C+     + V
Sbjct: 45  PSSALREICLLKELKH-KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV 103

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
                Q++  L   H + ++HRD+KP N L+          L +FGLA  F    P R  
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELK---LANFGLARAF--GIPVRCY 158

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVT 189
           +  +                 S   D+ +             P      ++ + +++R+ 
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL--FPGNDVDDQLKRIF 216

Query: 190 EMKLTMTPEAICEGTP-PEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
            +  T T E     T  P++  +  Y    +        KL  + R+LL+
Sbjct: 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVP--KLNATGRDLLQ 264

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 66.1 bits (160), Expect = 2e-13
 Identities = 42/230 (18%), Positives = 80/230 (34%), Gaps = 12/230 (5%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTV 69
                 E +  ++L     +  +     +    +LV E L   L+ L   C       T 
Sbjct: 44  PSTTIREISILKELKH-SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA 102

Query: 70  LMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIR 129
                Q+++ + + H ++++HRD+KP N L+        + + DFGLA  F    P R  
Sbjct: 103 KSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAF--GIPVRKY 157

Query: 130 TRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVT 189
           T  +      A          S   D+ ++       + G   +      +E  ++ R+ 
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP---GVSEADQLMRIF 214

Query: 190 EMKLTMTPEAICEGT-PPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
            +  T   +     T  P++         L +        L +S  +LL 
Sbjct: 215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLK--GLDESGIDLLS 262

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.7 bits (159), Expect = 3e-13
 Identities = 42/230 (18%), Positives = 76/230 (33%), Gaps = 11/230 (4%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQY-CSKRFSLKT 68
                 E +  ++L+  P +  ++    + +   LV E L   L+            L  
Sbjct: 45  PSTAIREISLLKELNH-PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL 103

Query: 69  VLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI 128
           +     Q++  L   H  +++HRD+KP N L+        + L DFGLA       P R 
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLA--RAFGVPVRT 158

Query: 129 RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRV 188
            T  +      A          S   D+ +L       +  +  +     D+E  ++ R+
Sbjct: 159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP---GDSEIDQLFRI 215

Query: 189 TEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
                T   E +  G          + +            L +  R+LL 
Sbjct: 216 FRTLGTP-DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLS 264

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 3e-12
 Identities = 26/211 (12%), Positives = 62/211 (29%), Gaps = 13/211 (6%)

Query: 28  GVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK 87
            V  V          ++   +       L +        +T+  +  Q++  L+ +H  +
Sbjct: 77  DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 136

Query: 88  IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW 147
           +VHRD+KP N L+                          ++    +  T  Y +      
Sbjct: 137 VVHRDLKPQNILVTSSGQIKLADF-------GLARIYSFQMALTSVVVTLWYRAPEVLLQ 189

Query: 148 LDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPE 207
              +   DL ++        R K  ++     ++  ++ ++ ++      E         
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFR---GSSDVDQLGKILDVIGLPGEEDWPRDVALP 246

Query: 208 FAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
              F           E     + +  ++LL 
Sbjct: 247 RQAFHSKSAQ---PIEKFVTDIDELGKDLLL 274

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 3e-12
 Identities = 45/239 (18%), Positives = 90/239 (37%), Gaps = 30/239 (12%)

Query: 11  QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKR------ 63
                E +  ++ +    V  ++G  + G   +++MEL+    L+   +           
Sbjct: 68  IEFLNEASVMKEFNC-HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 126

Query: 64  ---FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
               SL  ++ +A ++   + +++  K VHRD+   N ++       TV + DFG+  D 
Sbjct: 127 LAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDI 183

Query: 121 CPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL-RGKLPWQSIKSD 179
                 R   +G     R+ S  + +    +   D+ +    L       + P+Q     
Sbjct: 184 YETDYYRKGGKG-LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ---GL 239

Query: 180 NEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE 238
           + E  ++ V E  L   P+      P    E +R C    +   P   K+R SF  ++ 
Sbjct: 240 SNEQVLRFVMEGGLLDKPDNC----PDMLFELMRMC----WQYNP---KMRPSFLEIIS 287

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 1e-11
 Identities = 38/236 (16%), Positives = 87/236 (36%), Gaps = 21/236 (8%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKR 63
            +R + E    + +     V  ++   T            LV  L+G  L ++ +   ++
Sbjct: 61  AKRTYRELRLLKHMKH-ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QK 117

Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
            +   V  L  Q++  L+++H   I+HRD+KP N  +        + ++DFGLA      
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTDDE 174

Query: 124 CPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEET 183
               + TR        A      W+  +   D+ ++   +   L G+  +      +   
Sbjct: 175 MTGYVATRW-----YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP---GTDHID 226

Query: 184 RMQRVTEMKLTMTPEAICEGTPPEFAEFLR-YCRGLAFSEEPNYGKLRDSFRNLLE 238
           +++ +  +  T   E + + +      +++   +    +    +        +LLE
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLE 282

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 3e-11
 Identities = 43/255 (16%), Positives = 88/255 (34%), Gaps = 26/255 (10%)

Query: 1   MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQ 58
           +K     +  + L  E      +     V +++G  T  G   ++++E     +L    +
Sbjct: 51  LKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR 110

Query: 59  YCSK---------------RFSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVR 103
                                +L+ ++  + Q+   +E +  +K +HRD+   N L+   
Sbjct: 111 SKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-- 168

Query: 104 ENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL 163
              N V + DFGLA       P  +R        ++ +         + + D+ +    L
Sbjct: 169 -EKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 226

Query: 164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEE 223
                           +EE   +R+ E      P+       PE  + +  C     S+ 
Sbjct: 227 WEIFSLGASPYPGVKIDEEF-CRRLKEGTRMRAPDYT----TPEMYQTMLDCWHGEPSQR 281

Query: 224 PNYGKLRDSFRNLLE 238
           P + +L +   NLL+
Sbjct: 282 PTFSELVEHLGNLLQ 296

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 4e-11
 Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 20/210 (9%)

Query: 10  VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYN------ILVMELLGPSLEDLFQYCSKR 63
            +R + E    + +     V  ++   T  +         LVM  +G  L  L ++  ++
Sbjct: 61  AKRAYRELRLLKHMRH-ENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--EK 117

Query: 64  FSLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPN 123
                +  L  QM+  L ++H   I+HRD+KP N  +        + ++DFGLA      
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQADSE 174

Query: 124 CPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEET 183
                 T  +      A      W+  +   D+ ++   +   + GK  ++     +   
Sbjct: 175 -----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK---GSDHLD 226

Query: 184 RMQRVTEMKLTMTPEAICEGTPPEFAEFLR 213
           +++ + ++  T   E +      E   +++
Sbjct: 227 QLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.4 bits (140), Expect = 1e-10
 Identities = 37/178 (20%), Positives = 69/178 (38%), Gaps = 13/178 (7%)

Query: 28  GVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK 87
            V              LVMEL+     +L Q        + +  L  QM+  ++H+H   
Sbjct: 83  NVFTPQKTLEEFQDVYLVMELMD---ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG 139

Query: 88  IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW 147
           I+HRD+KP N ++   ++  T+ ++DFGLA     +            T  Y +      
Sbjct: 140 IIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILG 192

Query: 148 LDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTP 205
           +      D+ ++   +   +R K+ +      +   +  +V E   T  PE + +  P
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKILFP---GRDYIDQWNKVIEQLGTPCPEFMKKLQP 247

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 56.3 bits (135), Expect = 2e-10
 Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 13/106 (12%)

Query: 15  WERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLAD 74
             RN +  L    G+     Y   G+   ++MEL+             R  ++    + D
Sbjct: 60  SARNEFRALQKLQGLAVPKVYAWEGNA--VLMELI-------DAKELYRVRVENPDEVLD 110

Query: 75  QMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDF 120
            ++  +   + + IVH D+   N L+        ++++DF  +V+ 
Sbjct: 111 MILEEVAKFYHRGIVHGDLSQYNVLVSEEG----IWIIDFPQSVEV 152

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.4 bits (137), Expect = 3e-10
 Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 15/190 (7%)

Query: 11  QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLG-----PSLEDLFQYCSKRFS 65
           QR+    N  E   GA  +  ++ +      N + + ++        L  + +Y  +   
Sbjct: 64  QRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIP 123

Query: 66  LKTVLMLADQMISRLEHVHRK-KIVHRDIKPDNFLM---GVRENFNTVYLVDFGLAVDFC 121
           L  V  ++ Q++  L+++HR+  I+H DIKP+N LM      EN   + + D G A  + 
Sbjct: 124 LIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD 183

Query: 122 PNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNE 181
            +    I       T  Y S             D+ +    +   + G   ++  +  + 
Sbjct: 184 EHYTNSI------QTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSY 237

Query: 182 ETRMQRVTEM 191
                 + ++
Sbjct: 238 TKDDDHIAQI 247

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 8e-08
 Identities = 36/195 (18%), Positives = 64/195 (32%), Gaps = 21/195 (10%)

Query: 27  PGVPHVMGYGTSGDYNILVMELLGPSLE--DLFQYCSK-RFSLKTVLMLADQMISRLEHV 83
             +   +      +     + L+    E   LF Y ++   +++ ++ LA    S L H+
Sbjct: 57  ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 116

Query: 84  H--------RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLT 134
           H        +  I HRD+K  N L  V++N     + D GLAV          I      
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNIL--VKKNGT-CCIADLGLAVRHDSATDTIDIAPNHRV 173

Query: 135 GTARY------ASVNAHQWLDQSPRDDLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRV 188
           GT RY            +  +   R D+ A+        R        +           
Sbjct: 174 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233

Query: 189 TEMKLTMTPEAICEG 203
           ++  +    + +CE 
Sbjct: 234 SDPSVEEMRKVVCEQ 248

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	257
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.67
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.13
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.75
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	96.67
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.07
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.67
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	87.67

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.4e-50  Score=321.45  Aligned_cols=253  Identities=43%  Similarity=0.766  Sum_probs=222.7

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ||+.+.......+.+|++.+..+.++++++.+++++..+...++|||+++++|.+++......++..++..++.|++.||
T Consensus        35 vK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l  114 (293)
T d1csna_          35 IKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARV  114 (293)
T ss_dssp             EEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHH
Confidence            46655666677899999999999978999999999999999999999999999999987677899999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccC--CCCeEEEEeCCcceecCCCCCC----CCCccCCCCcccccChhHhcCCCCCCcc
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRE--NFNTVYLVDFGLAVDFCPNCPP----RIRTRGLTGTARYASVNAHQWLDQSPRD  154 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~--~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~  154 (257)
                      .+||+.||+||||||+||+++.+.  ..+.++|+|||++.........    ........||+.|+|||.+.+..++.++
T Consensus       115 ~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~  194 (293)
T d1csna_         115 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRD  194 (293)
T ss_dssp             HHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHH
T ss_pred             HHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHH
Confidence            999999999999999999997532  2478999999999876543211    1122456799999999999999999999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHH
Q psy2769         155 DLEALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFR  234 (257)
Q Consensus       155 Dv~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~  234 (257)
                      ||||||+++|+|++|..||.+............+...+.....+.....+|+++.+++..|++.+|++||+++.+.+.|+
T Consensus       195 DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~  274 (293)
T d1csna_         195 DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS  274 (293)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence            99999999999999999999887777777777777777777777888899999999999999999999999999999999


Q ss_pred             HHHHhccccCCCCCcccccc
Q psy2769         235 NLLENKERCEFDLRYDWTLL  254 (257)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~  254 (257)
                      +++++.+ ++.+.++||+.|
T Consensus       275 ~~~~~~~-~~~~~~~Dw~~~  293 (293)
T d1csna_         275 KVLERLN-TTEDENFDWNLL  293 (293)
T ss_dssp             HHHHHTT-CCSCSCCGGGCC
T ss_pred             HHHHHcC-CCCCCCCCCCcC
Confidence            9999887 889999999975

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-50  Score=324.00  Aligned_cols=255  Identities=48%  Similarity=0.899  Sum_probs=216.1

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRL   80 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l   80 (257)
                      ||+...+...+++..|+++++.+.+|++|+.+.+++..+...++|||++++++.+.+......+++..+..++.|++.||
T Consensus        37 vK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l  116 (299)
T d1ckia_          37 IKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI  116 (299)
T ss_dssp             EEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             EEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHH
Confidence            46656666677899999999999967778888888888889999999999999888887678899999999999999999


Q ss_pred             HHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC----CCCccCCCCcccccChhHhcCCCCCCcchH
Q psy2769          81 EHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP----RIRTRGLTGTARYASVNAHQWLDQSPRDDL  156 (257)
Q Consensus        81 ~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv  156 (257)
                      .|||++||+||||||+||+++..+....++++|||++..+......    ........||+.|+|||.+.+..++.++||
T Consensus       117 ~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  196 (299)
T d1ckia_         117 EYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL  196 (299)
T ss_dssp             HHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHH
T ss_pred             HHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhE
Confidence            9999999999999999999986655578999999999876554321    112245679999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         157 EALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       157 ~slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |||||++|||++|..||......+....+..........+.+....++|+++.+++..||+.+|++||+++++.+.|+++
T Consensus       197 wSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             HHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             EecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            99999999999999999987766666666666666666777777789999999999999999999999999999999999


Q ss_pred             HHhccccCCCCCcccccccc
Q psy2769         237 LENKERCEFDLRYDWTLLER  256 (257)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~  256 (257)
                      +.+.+ .+.+.++||+.++.
T Consensus       277 ~~~~~-~~~~~~~Dw~~~~~  295 (299)
T d1ckia_         277 FHRQG-FSYDYVFDWNMLKF  295 (299)
T ss_dssp             HHHHT-CCCSCCCHHHHGGG
T ss_pred             HHHcC-CCCCCCcCchhhcC
Confidence            88777 88899999998874

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-51  Score=325.95  Aligned_cols=231  Identities=21%  Similarity=0.275  Sum_probs=190.2

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++++. ||||+++++++.+++..|+||||| ||+|.+++.. .+.+++..+..++.|++.||.|||+.
T Consensus        50 ~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~-~~~l~e~~~~~~~~qi~~al~ylH~~  127 (288)
T d1uu3a_          50 NKVPYVTRERDVMSRLD-HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-IGSFDETCTRFYTAEIVSALEYLHGK  127 (288)
T ss_dssp             TCHHHHHHHHHHHHHCC-STTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcC-CCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhc-cCCCCHHHHHHHHHHHHHHHHhhccc
Confidence            44567999999999998 999999999999999999999999 9999998885 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.++|+|||++..+....... ......||+.|+|||++.+..++.++||||+||++|+|
T Consensus       128 ~iiHrDiKp~NIll~~~---~~vkl~DFG~a~~~~~~~~~~-~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyel  203 (288)
T d1uu3a_         128 GIIHRDLKPENILLNED---MHIQITDFGTAKVLSPESKQA-RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL  203 (288)
T ss_dssp             TEECSCCSGGGEEECTT---SCEEECCCTTCEECC-----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             cEEcCcCCccccccCCC---ceEEecccccceecccCCccc-ccccccCCccccCceeeccCCCCcccceehhhHHHHHH
Confidence            99999999999999876   889999999998765432221 22456799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhccccCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERCEFD  246 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~~~~  246 (257)
                      ++|..||.+.   +....+..+......+     +..+|+.+.++|++||+.||++|||++++.+.  ..+.+++   +-
T Consensus       204 l~g~~Pf~~~---~~~~~~~~i~~~~~~~-----p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~--~~i~~Hp---ff  270 (288)
T d1uu3a_         204 VAGLPPFRAG---NEYLIFQKIIKLEYDF-----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY--GPLKAHP---FF  270 (288)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHTTCCCC-----CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH--HHHHTSG---GG
T ss_pred             hhCCCCCCCc---CHHHHHHHHHcCCCCC-----CccCCHHHHHHHHHHccCCHhHCcCHHHHcCC--HHHHcCC---cc
Confidence            9999999873   4444445554443332     36789999999999999999999999998653  2233333   55


Q ss_pred             CCccccccccC
Q psy2769         247 LRYDWTLLERK  257 (257)
Q Consensus       247 ~~~~~~~~~~~  257 (257)
                      ..+||+.|++|
T Consensus       271 ~~i~w~~l~~~  281 (288)
T d1uu3a_         271 ESVTWENLHQQ  281 (288)
T ss_dssp             TTCCCTTGGGS
T ss_pred             CCCCHHHhhcC
Confidence            66899988764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-50  Score=321.33  Aligned_cols=226  Identities=21%  Similarity=0.277  Sum_probs=182.9

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +...+.|.+|+.++.+++ ||||+++++++.. +..++||||| +|+|.+++...+..+++..+..++.|++.||.|||+
T Consensus        45 ~~~~~~~~~E~~~l~~l~-HpnIv~~~~~~~~-~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~  122 (276)
T d1uwha_          45 PQQLQAFKNEVGVLRKTR-HVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA  122 (276)
T ss_dssp             TTHHHHHHHHHHHHTTCC-CTTBCCEEEEECS-SSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCC-CCCEeeeeEEEec-cEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            345678999999999998 9999999998765 4689999999 899999998666779999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC---CCCCcchHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL---DQSPRDDLEALCYT  162 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slg~~  162 (257)
                      +||+||||||+||+++.+   +.+||+|||++......... .......||+.|+|||++.+.   .++.++|||||||+
T Consensus       123 ~~ivHrDlKp~NiLl~~~---~~~Kl~DFGla~~~~~~~~~-~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~  198 (276)
T d1uwha_         123 KSIIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGS-HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV  198 (276)
T ss_dssp             TTCCCSCCCGGGEEEETT---SSEEECCCCCSCC-------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHH
T ss_pred             CCEeccccCHHHEEEcCC---CCEEEccccceeeccccCCc-ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHH
Confidence            999999999999999876   89999999998765433221 122456799999999999753   46889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      +|||++|+.||.+.....  .....+...............+|+.+.+++.+||+.||++|||++++++.|+.+.++.
T Consensus       199 l~el~tg~~Pf~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~  274 (276)
T d1uwha_         199 LYELMTGQLPYSNINNRD--QIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL  274 (276)
T ss_dssp             HHHHHHSSCTTTTCCCHH--HHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHCCCCCCCCChHH--HHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence            999999999998764332  2223333333333344556789999999999999999999999999999999887654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8e-51  Score=326.29  Aligned_cols=224  Identities=14%  Similarity=0.261  Sum_probs=178.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.|.+|+.++.+++ ||||+++++++..++..++||||| +|+|.+++......+++.++..++.|++.||.|||++|
T Consensus        70 ~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T d1jpaa_          70 QRRDFLSEASIMGQFD-HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN  148 (299)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            3457999999999998 999999999999999999999999 99999998865667999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCC--CccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRI--RTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      ++||||||+||+++.+   +.+||+|||++...........  ......+|+.|+|||.+.+..++.++|||||||++||
T Consensus       149 iiHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~e  225 (299)
T d1jpaa_         149 YVHRDLAARNILVNSN---LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWE  225 (299)
T ss_dssp             CCCSCCCGGGEEECTT---CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHH
T ss_pred             CccCccccceEEECCC---CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHH
Confidence            9999999999999876   8999999999976654322211  1123457899999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcccc
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKERC  243 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~~~  243 (257)
                      |++ |..||.+...   .+.+..+....    ..+.+..+|+.+.+++.+||+.||++|||+.++++.|++++++....
T Consensus       226 l~t~g~~Pf~~~~~---~~~~~~i~~~~----~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p~sl  297 (299)
T d1jpaa_         226 VMSYGERPYWDMTN---QDVINAIEQDY----RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSL  297 (299)
T ss_dssp             HHTTSCCTTTTCCH---HHHHHHHHTTC----CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGGG
T ss_pred             HHhCCCCCCCCCCH---HHHHHHHHcCC----CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcChhhC
Confidence            998 8999987533   33333333221    12233678999999999999999999999999999999999876533

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-50  Score=316.46  Aligned_cols=206  Identities=20%  Similarity=0.284  Sum_probs=178.8

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++++++ ||||+++++++.+++..++||||| +|+|.+++.. ...+++..+..++.|++.||.|||++
T Consensus        48 ~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~-~~~l~e~~~~~i~~qi~~al~~lH~~  125 (263)
T d2j4za1          48 GVEHQLRREVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSK  125 (263)
T ss_dssp             TCHHHHHHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcC-CCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34567889999999998 999999999999999999999999 9999999985 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++.......     .....||+.|+|||++.+..++.++|||||||++|+|
T Consensus       126 ~ivHrDiKp~Nill~~~---~~~kl~DFG~a~~~~~~~-----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel  197 (263)
T d2j4za1         126 RVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSSR-----RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF  197 (263)
T ss_dssp             TCCCCCCCGGGEEECTT---SCEEECCCCSCSCCCCCC-----CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             CeeeeeeccccceecCC---CCEeecccceeeecCCCc-----ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHH
Confidence            99999999999999876   889999999997654321     2456799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|+.||.+.   +..+.+..+......     .+..+|+.+.++|.+||+.||++|||++++++
T Consensus       198 l~G~~Pf~~~---~~~~~~~~i~~~~~~-----~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         198 LVGKPPFEAN---TYQETYKRISRVEFT-----FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHSSCTTCCS---SHHHHHHHHHTTCCC-----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hcCCCCCCCC---CHHHHHHHHHcCCCC-----CCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            9999999863   344444444443322     23678999999999999999999999999976

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-49  Score=316.23  Aligned_cols=209  Identities=21%  Similarity=0.323  Sum_probs=178.3

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++++++ ||||+++++++.+++..|+||||| |++|.+++.  ...+++..+..++.|++.||.|||++|
T Consensus        60 ~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~  136 (293)
T d1yhwa1          60 KKELIINEILVMRENK-NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQ  136 (293)
T ss_dssp             CHHHHHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4567999999999998 999999999999999999999999 999999887  457999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+||||||+||+++.+   +.+||+|||++..+.....   ......||+.|+|||++.+..++.++||||+||++|+|+
T Consensus       137 iiHrDiKp~NILl~~~---~~vkl~DFG~a~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyeml  210 (293)
T d1yhwa1         137 VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI  210 (293)
T ss_dssp             EECCCCSGGGEEECTT---CCEEECCCTTCEECCSTTC---CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHH
T ss_pred             CcccCCcHHHeEECCC---CcEeeccchhheeeccccc---cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHh
Confidence            9999999999999866   8999999999987654322   225567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+..   ....+..+.....  .....+..+|+.+.++|.+||+.||++|||++++++
T Consensus       211 tG~~Pf~~~~---~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         211 EGEPPYLNEN---PLRALYLIATNGT--PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HSSCTTTTSC---HHHHHHHHHHHCS--CCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hCCCCCCCCC---HHHHHHHHHhCCC--CCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999998743   3333333332221  122334678999999999999999999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-50  Score=318.63  Aligned_cols=221  Identities=18%  Similarity=0.271  Sum_probs=187.1

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+++.+|+.++.+++ ||||+++++++.++ ..++||||| +|+|.+++......+++..+..++.|++.||.|||++|
T Consensus        52 ~~~~~~~E~~il~~l~-HpnIv~l~g~~~~~-~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~  129 (285)
T d1u59a_          52 DTEEMMREAQIMHQLD-NPYIVRLIGVCQAE-ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN  129 (285)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeEeeeeccC-eEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3567999999999998 99999999999754 589999999 89999998755667999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.+   +.+||+|||++.................+|+.|+|||++.+..++.++||||||+++|||+
T Consensus       130 iiHrDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~l  206 (285)
T d1u59a_         130 FVHRDLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL  206 (285)
T ss_dssp             EECCCCSGGGEEEEET---TEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             eecCcCchhheeeccC---CceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHH
Confidence            9999999999999877   8999999999987765443333334556889999999999889999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      + |..||.+....+   ....+..+    ..++.+..+|+++.++|.+||+.||++|||+.++.+.|++...+..
T Consensus       207 t~G~~Pf~~~~~~~---~~~~i~~~----~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~  274 (285)
T d1u59a_         207 SYGQKPYKKMKGPE---VMAFIEQG----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  274 (285)
T ss_dssp             TTSCCTTTTCCTHH---HHHHHHTT----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCHHH---HHHHHHcC----CCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence            8 999999865432   23333322    2233447899999999999999999999999999999998876543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-50  Score=318.41  Aligned_cols=213  Identities=21%  Similarity=0.227  Sum_probs=174.7

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+++.+|+.++++++ ||||+++++++.+++..|+||||| +|+|.+++.. ...+++..+..++.|++.||.|||++
T Consensus        45 ~~~~~~~~Ei~~l~~l~-HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~-~~~l~e~~~~~i~~qi~~al~ylH~~  122 (271)
T d1nvra_          45 DCPENIKKEICINKMLN-HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP-DIGMPEPDAQRFFHQLMAGVVYLHGI  122 (271)
T ss_dssp             ----CHHHHHHHHHTCC-CTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBT-TTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHhCC-CCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            34568999999999998 999999999999999999999999 8999999873 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~  165 (257)
                      ||+||||||+||+++.+   +.+||+|||++.......... ......||+.|+|||++.+..+ +.++||||+||++|+
T Consensus       123 ~IiHrDiKp~NILl~~~---~~~KL~DFG~a~~~~~~~~~~-~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilye  198 (271)
T d1nvra_         123 GITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRER-LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA  198 (271)
T ss_dssp             TEECSCCCGGGEEECTT---CCEEECCCTTCEECEETTEEC-CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHH
T ss_pred             CCccCcccHHHEEECCC---CCEEEccchhheeeccCCccc-cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHH
Confidence            99999999999999866   889999999998764432221 1245689999999999988876 578999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|+.||..........  .....   ..........+|+.+.++|.+||+.||++|||++++++
T Consensus       199 ml~G~~pf~~~~~~~~~~--~~~~~---~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         199 MLAGELPWDQPSDSCQEY--SDWKE---KKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHSSCSCSSSSTTSHHH--HHHHT---TCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhCCCCCCCCChHHHHH--HHHhc---CCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999998754433221  11111   11122223578999999999999999999999999854

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-49  Score=313.72  Aligned_cols=219  Identities=15%  Similarity=0.216  Sum_probs=175.5

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ....+.+.+|+.++.+++ ||||+++++++..++..++||||+ +|+|.+++......+++..+..++.|++.||.|||+
T Consensus        41 ~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~  119 (263)
T d1sm2a_          41 AMSEEDFIEEAEVMMKLS-HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE  119 (263)
T ss_dssp             SSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHhcC-CCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhc
Confidence            345678999999999998 999999999999999999999999 999999998666789999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .+++||||||+||+++.+   +.+||+|||++.........  ......||+.|+|||++.+..++.++||||||+++||
T Consensus       120 ~~iiHrDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~e  194 (263)
T d1sm2a_         120 ACVIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQYT--SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE  194 (263)
T ss_dssp             TTCCCTTCSGGGEEECGG---GCEEECSCC--------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             cceeecccchhheeecCC---CCeEecccchheeccCCCce--eecceecCcccCChHHhcCCCCCchhhhcchHHHHHH
Confidence            999999999999999877   89999999998765443221  1134568999999999999999999999999999999


Q ss_pred             HHhC-CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         166 FLRG-KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       166 l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      |+++ .+||...   +..+.+..+.....    ...+..+|+.+.+++..||+.||++|||++++++.|+++.+
T Consensus       195 l~t~~~~~~~~~---~~~~~~~~i~~~~~----~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         195 VFSEGKIPYENR---SNSEVVEDISTGFR----LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHTTSCCTTCSC---CHHHHHHHHHHTCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCCC---CHHHHHHHHHhcCC----CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            9994 6556542   33344444433322    22235688999999999999999999999999999998865

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-50  Score=319.50  Aligned_cols=213  Identities=15%  Similarity=0.243  Sum_probs=178.5

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ....+.+.+|+.++++++ ||||+++++++.+++..++||||| +|+|.+++....+.+++..+..++.|++.||.|||+
T Consensus        50 ~~~~~~~~~E~~il~~l~-HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~  128 (288)
T d2jfla1          50 EEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD  128 (288)
T ss_dssp             SGGGGGTHHHHHHHHHCC-CTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999998 999999999999999999999999 999999988667789999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhc-----CCCCCCcchHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQ-----WLDQSPRDDLEALC  160 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~-----~~~~~~~~Dv~slg  160 (257)
                      +||+||||||+||+++.+   +.+||+|||++.......   .......||+.|+|||++.     +..++.++||||+|
T Consensus       129 ~~ivHrDiKp~NIll~~~---~~~Kl~DFG~a~~~~~~~---~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlG  202 (288)
T d2jfla1         129 NKIIHRDLKAGNILFTLD---GDIKLADFGVSAKNTRTI---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG  202 (288)
T ss_dssp             TTEECCCCSGGGEEECTT---SCEEECCCTTCEECHHHH---HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHH
T ss_pred             CCEEEeecChhheeECCC---CCEEEEechhhhccCCCc---ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHH
Confidence            999999999999999876   889999999987543321   1113567999999999984     44578999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|+|++|..||.+......   +..+.....+  ....+..+|+++.++|++||+.||++|||++++++
T Consensus       203 vilyemltg~~Pf~~~~~~~~---~~~i~~~~~~--~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         203 ITLIEMAEIEPPHHELNPMRV---LLKIAKSEPP--TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHHHHHSSCTTTTSCGGGH---HHHHHHSCCC--CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHhhCCCCCCCCCHHHH---HHHHHcCCCC--CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999988654433   3333333221  22223678999999999999999999999999865

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-49  Score=318.13  Aligned_cols=213  Identities=18%  Similarity=0.198  Sum_probs=168.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++++. ||||+++++++.+++..|+||||| |++|.+++.. ...+++..+..++.|++.||.|||++|
T Consensus        50 ~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~-~~~l~e~~~~~~~~qi~~al~ylH~~~  127 (307)
T d1a06a_          50 KEGSMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVE-KGFYTERDASRLIFQVLDAVKYLHDLG  127 (307)
T ss_dssp             -----CHHHHHHHTCC-CTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHT-CSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhc-ccCCCHHHHHHHHHHHHHHHHhhhhce
Confidence            3467889999999998 999999999999999999999999 8999999984 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||++.....++.+||+|||++.......    ......||+.|+|||++.+..++.++||||+||++|+|+
T Consensus       128 iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~----~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell  203 (307)
T d1a06a_         128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS----VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL  203 (307)
T ss_dssp             CCCSCCCGGGEEESSSSTTCCEEECCC----------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             eeeEEecccceeecccCCCceEEEeccceeEEccCCC----eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHH
Confidence            9999999999999765455899999999997654332    124567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+.   ........+........ ......+|+.+.++|.+||+.||++|||++++++
T Consensus       204 ~g~~Pf~~~---~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         204 CGYPPFYDE---NDAKLFEQILKAEYEFD-SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HSSCSCCCS---SHHHHHHHHHTTCCCCC-TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCC---CHHHHHHHHhccCCCCC-CccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            999999873   33444444444433322 2334679999999999999999999999999876

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-49  Score=314.09  Aligned_cols=216  Identities=17%  Similarity=0.269  Sum_probs=181.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+++.+|+.++++++ ||||+++++++..+ ..++||||+ +|+|.+++.. ...+++..+..++.|++.||.|||++|+
T Consensus        52 ~~~~~~E~~il~~l~-HpnIv~~~g~~~~~-~~~lvmE~~~~g~L~~~l~~-~~~l~~~~~~~i~~qi~~gl~ylH~~~i  128 (277)
T d1xbba_          52 KDELLAEANVMQQLD-NPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQ-NRHVKDKNIIELVHQVSMGMKYLEESNF  128 (277)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEEESS-SEEEEEECCTTEEHHHHHHH-CTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCCceEEEEeccC-CEEEEEEcCCCCcHHHHHhh-ccCCCHHHHHHHHHHHHHHHhhHHhCCc
Confidence            457999999999998 99999999999754 578999999 9999999884 6679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.++++|||++.................||+.|+|||.+.+..++.++||||||+++|||++
T Consensus       129 iHrDlKp~Nill~~~---~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt  205 (277)
T d1xbba_         129 VHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS  205 (277)
T ss_dssp             ECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCcchhhccccc---CcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhh
Confidence            999999999999877   89999999999876554333333244578999999999999889999999999999999998


Q ss_pred             -CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         169 -GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       169 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                       |+.||.+...   .+....+..+    ..++.+..+|+.+.+++.+||+.||++|||++++.+.|++++.
T Consensus       206 ~g~~Pf~~~~~---~~~~~~i~~~----~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         206 YGQKPYRGMKG---SEVTAMLEKG----ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             TTCCSSTTCCH---HHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCH---HHHHHHHHcC----CCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence             8999997543   2333333322    2233446799999999999999999999999999998888764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-48  Score=312.20  Aligned_cols=222  Identities=18%  Similarity=0.277  Sum_probs=183.3

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ....+++.+|+.++++++ ||||+++++++.+++..++||||| +|+|.+++... ...+++..+..++.|++.||.|||
T Consensus        54 ~~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH  132 (287)
T d1opja_          54 TMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE  132 (287)
T ss_dssp             CSCHHHHHHHHHHHHHCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHhCC-CCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999998 999999999999999999999999 99999999754 567899999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      ++||+||||||+||+++.+   +.+||+|||++........  .......+++.|+|||++.+..++.++||||||+++|
T Consensus       133 ~~~iiHrDlKp~NILl~~~---~~~Kl~DFG~a~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~  207 (287)
T d1opja_         133 KKNFIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW  207 (287)
T ss_dssp             HTTCCCSCCSGGGEEECGG---GCEEECCCCCTTTCCSSSS--EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred             HCCcccCccccCeEEECCC---CcEEEccccceeecCCCCc--eeeccccccccccChHHHcCCCCCchhhhhhHHHHHH
Confidence            9999999999999999877   8999999999976543321  1113345788999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      ||++|..||....  +.......+...    ..+..+..+|+.+.+++.+||+.||++|||++++.+.|+.+.++.
T Consensus       208 ell~~~~p~~~~~--~~~~~~~~i~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~~  277 (287)
T d1opja_         208 EIATYGMSPYPGI--DLSQVYELLEKD----YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  277 (287)
T ss_dssp             HHHTTSCCSSTTC--CHHHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSSS
T ss_pred             HHHhCCCCCCCcc--hHHHHHHHHhcC----CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhC
Confidence            9999766655432  222222222221    223334679999999999999999999999999999998876654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-48  Score=317.05  Aligned_cols=218  Identities=17%  Similarity=0.192  Sum_probs=180.5

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc----------------------CCC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS----------------------KRF   64 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~----------------------~~~   64 (257)
                      ...+.+.+|+.++.++.+||||+++++++.+.+..++||||| +|+|.+++....                      ..+
T Consensus        82 ~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  161 (325)
T d1rjba_          82 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL  161 (325)
T ss_dssp             --CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCC
Confidence            445678999999999966999999999999999999999999 999999997532                      247


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhH
Q psy2769          65 SLKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA  144 (257)
Q Consensus        65 ~~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~  144 (257)
                      ++..+..++.|++.||.|||++||+||||||+||+++.+   +.+||+|||+++........ .......+|+.|+|||+
T Consensus       162 ~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~-~~~~~~~gt~~y~aPE~  237 (325)
T d1rjba_         162 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSDSNY-VVRGNARLPVKWMAPES  237 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETT---TEEEECCCGGGSCGGGCTTS-EEETTEEECGGGCCHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccC---CeEEEeeccccccccCCCce-eeeccccCCCccCChHH
Confidence            889999999999999999999999999999999999876   89999999999765443221 11134567999999999


Q ss_pred             hcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCC
Q psy2769         145 HQWLDQSPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEE  223 (257)
Q Consensus       145 ~~~~~~~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  223 (257)
                      +.+..++.++|||||||++|||++ |..||.+......   +..+......   ...+..+|+.+.++|.+||+.||++|
T Consensus       238 l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~---~~~~~~~~~~---~~~p~~~~~~l~~li~~cl~~dP~~R  311 (325)
T d1rjba_         238 LFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN---FYKLIQNGFK---MDQPFYATEEIYIIMQSCWAFDSRKR  311 (325)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH---HHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH---HHHHHhcCCC---CCCCCcCCHHHHHHHHHHcCCChhHC
Confidence            999999999999999999999997 8999987654432   2222222222   23336789999999999999999999


Q ss_pred             CChHHHHHHHHH
Q psy2769         224 PNYGKLRDSFRN  235 (257)
Q Consensus       224 p~~~~~~~~l~~  235 (257)
                      ||+++|++.|..
T Consensus       312 Pt~~ei~~~L~~  323 (325)
T d1rjba_         312 PSFPNLTSFLGC  323 (325)
T ss_dssp             CCHHHHHHHHHH
T ss_pred             cCHHHHHHHHhC
Confidence            999999998864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-48  Score=309.18  Aligned_cols=222  Identities=12%  Similarity=0.152  Sum_probs=177.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      ...+.+|+.++.+++ ||||+++++++......++||||+ ++++.+.+......+++..+..++.|++.||.|||+.+|
T Consensus        53 ~~~~~~E~~il~~l~-H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~i  131 (283)
T d1mqba_          53 RVDFLGEAGIMGQFS-HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY  131 (283)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHhcC-CCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccc
Confidence            446889999999998 999999999999999999999999 999999888767789999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+   +.+||+|||++.................||+.|+|||++.+..++.++||||||+++|||++
T Consensus       132 iHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t  208 (283)
T d1mqba_         132 VHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT  208 (283)
T ss_dssp             CCSCCCGGGEEECTT---CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccCccccceEEECCC---CeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHh
Confidence            999999999999876   89999999999765543322222234568899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |..|+....  ...+....+..+    ..++.+..+|+.+.+++.+||+.||++|||+.++++.|+++++...
T Consensus       209 ~~~~~~~~~--~~~~~~~~i~~~----~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p~  275 (283)
T d1mqba_         209 YGERPYWEL--SNHEVMKAINDG----FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  275 (283)
T ss_dssp             TSCCTTTTC--CHHHHHHHHHTT----CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             CCCCccccC--CHHHHHHHHhcc----CCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCcc
Confidence            655554422  233333333322    2223346789999999999999999999999999999999988544

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.8e-48  Score=316.48  Aligned_cols=213  Identities=18%  Similarity=0.247  Sum_probs=182.6

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++++|+ ||||+++++++.+++.+|+||||| ||+|.+++......+++..+..++.||+.||.|||++|
T Consensus        66 ~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~  144 (350)
T d1koaa2          66 DKETVRKEIQTMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN  144 (350)
T ss_dssp             HHHHHHHHHHHHHHTC-CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            3567889999999998 999999999999999999999999 99999999755667999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.+ .++.+||+|||++.......    ......||+.|+|||++.+..++.++||||+||++|+|+
T Consensus       145 iiHrDiKp~NIll~~~-~~~~vkL~DFG~a~~~~~~~----~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell  219 (350)
T d1koaa2         145 YVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQ----SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL  219 (350)
T ss_dssp             EECCCCCGGGEEESST-TSCCEEECCCTTCEECCTTS----CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHH
T ss_pred             CeeeeechhHeeeccC-CCCeEEEeecchheeccccc----ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHH
Confidence            9999999999999754 23789999999998764432    124567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+.   +..+.+..+........ ......+|+.+.++|.+||..||++|||++++++
T Consensus       220 ~G~~Pf~~~---~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         220 SGLSPFGGE---NDDETLRNVKSCDWNMD-DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             HSSCSSCCS---SHHHHHHHHHHTCCCSC-CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCC---CHHHHHHHHHhCCCCCC-cccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999863   44455555555443332 3344678999999999999999999999999876

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-48  Score=311.77  Aligned_cols=204  Identities=21%  Similarity=0.249  Sum_probs=172.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++++|. ||||+++++++.+++..|+||||| +++|..++. ....+++..+..++.|++.||.|||++||
T Consensus        59 ~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~-~~~~l~e~~~~~i~~qi~~aL~yLH~~~i  136 (309)
T d1u5ra_          59 WQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNM  136 (309)
T ss_dssp             HHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHCC-CCCEeeEEEEEEECCEEEEEEEecCCCchHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            356889999999998 999999999999999999999999 777765554 46789999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC---CCCCcchHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL---DQSPRDDLEALCYTLVY  165 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~slg~~l~~  165 (257)
                      +||||||+||+++.+   +.+||+|||++......       ....||+.|+|||++.+.   .++.++|||||||++|+
T Consensus       137 iHrDiKp~NILl~~~---~~~Kl~DFG~a~~~~~~-------~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilye  206 (309)
T d1u5ra_         137 IHRDVKAGNILLSEP---GLVKLGDFGSASIMAPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE  206 (309)
T ss_dssp             BCCCCSGGGEEEETT---TEEEECCCTTCBSSSSB-------CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHH
T ss_pred             eccCCCcceEEECCC---CCEEEeecccccccCCC-------CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHH
Confidence            999999999999876   89999999999765332       456799999999999643   47889999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||.+.   +....+..+.....+..   ....+|+.+.++|++||+.||++|||++++++
T Consensus       207 l~~g~~Pf~~~---~~~~~~~~i~~~~~~~~---~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         207 LAERKPPLFNM---NAMSALYHIAQNESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHSSCTTTTS---CHHHHHHHHHHSCCCCC---SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHCCCCCCCC---CHHHHHHHHHhCCCCCC---CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            99999999874   33344444444333222   12568999999999999999999999999865

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-48  Score=306.72  Aligned_cols=218  Identities=19%  Similarity=0.294  Sum_probs=175.2

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.++.+++ ||||+++++++.. +..++||||+ +++|.+++......+++..+..++.|++.||.|||+.|
T Consensus        51 ~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~-~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  128 (273)
T d1mp8a_          51 VREKFLQEALTMRQFD-HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR  128 (273)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCEEEEECS-SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeeEEEEEec-CeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC
Confidence            3567999999999998 9999999999964 5789999999 99999988866778999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      ++||||||+||+++.+   +.+||+|||++.........  ......+|+.|+|||.+.+..++.++||||||+++|||+
T Consensus       129 iiHrDlKp~NIll~~~---~~~Kl~DfG~a~~~~~~~~~--~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~l  203 (273)
T d1mp8a_         129 FVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYY--KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL  203 (273)
T ss_dssp             CCCSCCSGGGEEEEET---TEEEECC---------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHH
T ss_pred             eeccccchhheeecCC---CcEEEccchhheeccCCcce--eccceecCcccchhhHhccCCCCCccccccchHHHHHHH
Confidence            9999999999999877   89999999998765443221  124456889999999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      + |.+||.........   ..+..+    ...+.++.+|+.+.++|.+||+.||++|||++++++.|++++++.
T Consensus       204 t~g~~P~~~~~~~~~~---~~i~~~----~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  270 (273)
T d1mp8a_         204 MHGVKPFQGVKNNDVI---GRIENG----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  270 (273)
T ss_dssp             TTSCCTTTTCCGGGHH---HHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCCCHHHHH---HHHHcC----CCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            8 89999886554433   223222    222344789999999999999999999999999999999988754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-48  Score=308.30  Aligned_cols=208  Identities=22%  Similarity=0.284  Sum_probs=165.5

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYC---SKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+.+.+|+.++.++. ||||+++++++.+  +..+|+||||| +|+|.+++...   ...+++..+..++.|++.||.||
T Consensus        47 ~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~yl  125 (269)
T d2java1          47 KQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC  125 (269)
T ss_dssp             HHHHHHHHHHTTSCC-CTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCC-CCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            456889999999998 9999999998864  45689999999 99999998753   56799999999999999999999


Q ss_pred             HhCC-----ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHH
Q psy2769          84 HRKK-----IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEA  158 (257)
Q Consensus        84 h~~~-----i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~s  158 (257)
                      |++|     |+||||||+||+++.+   +.+||+|||++........   ......||+.|+|||++.+..++.++||||
T Consensus       126 H~~~~~~~~IiHrDiKp~NIll~~~---~~vkl~DFG~a~~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~~~~~DIwS  199 (269)
T d2java1         126 HRRSDGGHTVLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDTS---FAKAFVGTPYYMSPEQMNRMSYNEKSDIWS  199 (269)
T ss_dssp             HHHCC---------CCGGGEEECTT---SCEEECCHHHHHHC--------------CCCSCCCHHHHTTCCCCHHHHHHH
T ss_pred             HHhcCCCCCEEeCcCchhhcCcCCC---CcEEEeeccceeecccCCC---ccccCCCCcccCCHHHHcCCCCChHHHHHh
Confidence            9876     9999999999999876   8999999999987644321   124567999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         159 LCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       159 lg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |||++|+|++|+.||.+.   +..+....+.....    +..+..+|+++.++|++||+.||++|||++++++
T Consensus       200 lGvilyel~tg~~Pf~~~---~~~~~~~~i~~~~~----~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         200 LGCLLYELCALMPPFTAF---SQKELAGKIREGKF----RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHHHSSCSCCCS---SHHHHHHHHHHTCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hCHHHHHHhhCCCCCCCC---CHHHHHHHHHcCCC----CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            999999999999999874   33344444444332    2334678999999999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-47  Score=303.24  Aligned_cols=208  Identities=21%  Similarity=0.284  Sum_probs=172.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ..+.+.+|++++++++ ||||+++++++.+    ...+|+||||+ +++|.+++.. ...+++..+..++.|++.||.||
T Consensus        51 ~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~gl~yL  128 (270)
T d1t4ha_          51 ERQRFKEEAEMLKGLQ-HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKR-FKVMKIKVLRSWCRQILKGLQFL  128 (270)
T ss_dssp             HHHHHHHHHHHHTTCC-CTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCC-CCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhc-cccccHHHHHHHHHHHHHHHHHH
Confidence            3467899999999998 9999999999865    34689999999 9999999985 56799999999999999999999


Q ss_pred             HhCC--ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHH
Q psy2769          84 HRKK--IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCY  161 (257)
Q Consensus        84 h~~~--i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~  161 (257)
                      |++|  |+||||||+||+++.  .++.+||+|||++......     ......||+.|+|||++.+ .++.++||||+||
T Consensus       129 H~~~~~IiHrDiKp~NILl~~--~~~~~Kl~DFGla~~~~~~-----~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGv  200 (270)
T d1t4ha_         129 HTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRAS-----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGM  200 (270)
T ss_dssp             HTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGGGGCCTT-----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHH
T ss_pred             HHCCCCEEeCCcChhhceeeC--CCCCEEEeecCcceeccCC-----ccCCcccCccccCHHHhCC-CCCCcCchhhHHH
Confidence            9999  999999999999963  2378999999999753222     1245689999999999876 5899999999999


Q ss_pred             HHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         162 TLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       162 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++|+|++|+.||.....  .......+..   ...+......+++++.++|.+||+.||++|||++++++
T Consensus       201 ilyel~~g~~Pf~~~~~--~~~~~~~i~~---~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         201 CMLEMATSEYPYSECQN--AAQIYRRVTS---GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHSSCTTTTCSS--HHHHHHHHTT---TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHCCCCCCCccc--HHHHHHHHHc---CCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            99999999999986532  2222233322   22334455678999999999999999999999999865

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-48  Score=304.68  Aligned_cols=219  Identities=16%  Similarity=0.219  Sum_probs=179.6

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ....+.+.+|+.++.+++ ||||+++++++.. +..++||||+ +|+|.+++... ...+++..+..++.|++.||.|||
T Consensus        49 ~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~-~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH  126 (272)
T d1qpca_          49 SMSPDAFLAEANLMKQLQ-HQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE  126 (272)
T ss_dssp             SSCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHhCC-CCCEeEEEeeecc-CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            345567999999999997 9999999998865 4689999999 99999877643 346999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.||+||||||+||+++.+   +.+||+|||++.........  ......+++.|+|||++.+..++.++||||||+++|
T Consensus       127 ~~~ivHrDiKp~NIll~~~---~~~Kl~DFGla~~~~~~~~~--~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~  201 (272)
T d1qpca_         127 ERNYIHRDLRAANILVSDT---LSCKIADFGLARLIEDNEYT--AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT  201 (272)
T ss_dssp             HTTEECSCCSGGGEEECTT---SCEEECCCTTCEECSSSCEE--CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             hCCcccCccchhheeeecc---cceeeccccceEEccCCccc--cccccCCcccccChHHHhCCCCCchhhhhhhHHHHH
Confidence            9999999999999999876   89999999999876543211  113456889999999999888999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      ||+||..|+...  .+....+..+..+    ..+..+..+|+.+.+++.+||+.||++|||++++++.|++++.
T Consensus       202 ellt~~~~~~~~--~~~~~~~~~i~~~----~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         202 EIVTHGRIPYPG--MTNPEVIQNLERG----YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHTTTCCSSTT--CCHHHHHHHHHTT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCC--CCHHHHHHHHHhc----CCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            999965554432  2333333333332    2223346799999999999999999999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-48  Score=304.50  Aligned_cols=216  Identities=15%  Similarity=0.217  Sum_probs=183.9

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +...+.+.+|+.++.+++ ||||+++++++.+++.+++||||+ +|+|.+++......+++..+.+++.|++.||.|||+
T Consensus        40 ~~~~~~~~~Ev~~~~~l~-HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~  118 (258)
T d1k2pa_          40 SMSEDEFIEEAKVMMNLS-HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES  118 (258)
T ss_dssp             SSCHHHHHHHHHHHHTCC-CTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHhcC-CCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhh
Confidence            345578999999999998 999999999999999999999999 899999988767789999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      .||+||||||+||+++.+   +.+||+|||++.........  ......+|+.|+|||.+.+..++.++||||||+++||
T Consensus       119 ~~iiH~dlk~~Nill~~~---~~~kl~DfG~a~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~e  193 (258)
T d1k2pa_         119 KQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDEYT--SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE  193 (258)
T ss_dssp             TTBCCSCCSGGGEEECTT---CCEEECCCSSCCBCSSSSCC--CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cCcccccccceeEEEcCC---CcEEECcchhheeccCCCce--eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHh
Confidence            999999999999999866   89999999999765443222  2234678999999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHH
Q psy2769         166 FLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRN  235 (257)
Q Consensus       166 l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~  235 (257)
                      |+| |+.||.....   .+....+....    ....+..+|+.+.++|.+||+.||++|||++++++.|.+
T Consensus       194 l~t~g~~Pf~~~~~---~~~~~~i~~~~----~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         194 IYSLGKMPYERFTN---SETAEHIAQGL----RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHTTSCCTTTTSCH---HHHHHHHHTTC----CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHhcCCCCCCCCCH---HHHHHHHHhCC----CCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            998 8999988643   33334443322    222336789999999999999999999999999998753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-47  Score=305.07  Aligned_cols=212  Identities=16%  Similarity=0.227  Sum_probs=181.1

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++++++ ||||+++++++.+....|+||||| +|+|.+++.. .+.+++..+..++.|++.||.|||+.|+
T Consensus        57 ~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~-~~~l~~~~~~~~~~qi~~al~yLH~~~i  134 (293)
T d1jksa_          57 REDIEREVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAE-KESLTEEEATEFLKQILNGVYYLHSLQI  134 (293)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEEcCCCccccchhcc-ccccchhHHHHHHHHHHHHHHhhhhcce
Confidence            467899999999998 999999999999999999999999 9999999985 4679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCC-CCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVREN-FNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~-~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +||||||+||+++.++. ...+|++|||++.......    ......+++.|+|||++.+..++.++||||+||++|+|+
T Consensus       135 vHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~----~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell  210 (293)
T d1jksa_         135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL  210 (293)
T ss_dssp             ECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC----BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             eecccccceEEEecCCCcccceEecchhhhhhcCCCc----cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHH
Confidence            99999999999986532 2369999999998764432    224567899999999999999999999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +|..||.+.   +..+.+..+....... .......+|+.+.++|++||+.||++|||++++++
T Consensus       211 ~g~~Pf~~~---~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         211 SGASPFLGD---TKQETLANVSAVNYEF-EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HSSCSSCCS---SHHHHHHHHHTTCCCC-CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cCCCCCCCC---CHHHHHHHHHhcCCCC-CchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999874   3444444444433332 34445789999999999999999999999999875

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-48  Score=315.35  Aligned_cols=219  Identities=21%  Similarity=0.273  Sum_probs=174.7

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      +...+++.+|+.++++++ ||||++++++|.+....|+||||+ +++|.+++.. .+.+++..+..++.|++.||.|||+
T Consensus        45 ~~~~~~~~~Ei~il~~l~-HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~-~~~l~~~~~~~~~~qil~aL~yLH~  122 (322)
T d1s9ja_          45 PAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLRE  122 (322)
T ss_dssp             TTHHHHHHHHGGGGGGCC-CTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            344568899999999998 999999999999999999999999 8999999985 5679999999999999999999997


Q ss_pred             -CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          86 -KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        86 -~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                       .||+||||||+||+++.+   +.+||+|||++.......     .....||+.|+|||++.+..++.++||||+||++|
T Consensus       123 ~~~IiHRDiKP~NILl~~~---~~vkl~DFGla~~~~~~~-----~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~  194 (322)
T d1s9ja_         123 KHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLV  194 (322)
T ss_dssp             HHCCCCSCCSGGGEEECTT---CCEEECCCCCCHHHHHHT-----C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHH
T ss_pred             hCCEEccccCHHHeeECCC---CCEEEeeCCCccccCCCc-----cccccCCccccCchHHcCCCCCcHHHHHHHHHHHH
Confidence             599999999999999866   899999999987654321     14568999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHH-----------------------------------HHhhCChhhhh-cCCcHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTE-----------------------------------MKLTMTPEAIC-EGTPPEF  208 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~-~~~~~~~  208 (257)
                      ||++|+.||.+...............                                   ......++..+ ..+|+++
T Consensus       195 ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  274 (322)
T d1s9ja_         195 EMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF  274 (322)
T ss_dssp             HHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHH
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHH
Confidence            99999999987543321111000000                                   00000111111 2367889


Q ss_pred             HHHHHHHhcCCCCCCCChHHHHH--HHHH
Q psy2769         209 AEFLRYCRGLAFSEEPNYGKLRD--SFRN  235 (257)
Q Consensus       209 ~~li~~~l~~~p~~Rp~~~~~~~--~l~~  235 (257)
                      .++|.+||..||++|||++++++  .+++
T Consensus       275 ~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         275 QDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence            99999999999999999999987  4544

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-47  Score=307.94  Aligned_cols=208  Identities=18%  Similarity=0.211  Sum_probs=178.7

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++++. ||||+++++++.+...+|+||||| ||+|.+++.. ...+++..+..++.|++.||.|||++
T Consensus        47 ~~~~~~~~E~~il~~l~-hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~-~~~~~e~~~~~~~~qil~al~ylH~~  124 (337)
T d1o6la_          47 DEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSR  124 (337)
T ss_dssp             TCHHHHHHHHHHHHSCC-CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCEEEEEeeeccccccccceeccCCCchhhhhhc-ccCCcHHHHHHHHHHHhhhhhhhhhc
Confidence            34567899999999998 999999999999999999999999 9999999885 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++........   ......||+.|+|||++.+..++.++||||+||++|+|
T Consensus       125 ~iiHRDlKP~NILl~~~---g~vkl~DFG~a~~~~~~~~---~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyem  198 (337)
T d1o6la_         125 DVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDGA---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  198 (337)
T ss_dssp             TCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCCTTC---CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHH
T ss_pred             CccccccCHHHeEecCC---CCEEEeecccccccccCCc---ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHH
Confidence            99999999999999876   8999999999976543321   22557899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-----hHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-----YGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~~~  231 (257)
                      ++|.+||.+.   +.......+......     ++..+|+++.++|++||+.||.+||+     ++++++
T Consensus       199 l~G~~pf~~~---~~~~~~~~i~~~~~~-----~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         199 MCGRLPFYNQ---DHERLFELILMEEIR-----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHCCCC-----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHCCCCCCCc---CHHHHHHHHhcCCCC-----CCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            9999999874   344444444443333     33679999999999999999999995     566554

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=302.12  Aligned_cols=217  Identities=20%  Similarity=0.230  Sum_probs=180.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..++|.+|+.++++++ ||||+++++++.++ ..++||||+ ++++.+.+......+++..+..++.|++.||.|||++|
T Consensus        54 ~~~~~~~Ei~~l~~l~-H~nIv~~~g~~~~~-~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  131 (273)
T d1u46a_          54 AMDDFIREVNAMHSLD-HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR  131 (273)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCEEEEECSS-SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEEEEEEEEeec-chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            3467899999999997 99999999999764 689999999 99999988877778999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~  167 (257)
                      |+||||||+||+++.+   +.+||+|||++.................++..|+|||.+.+..++.++||||||+++|||+
T Consensus       132 iiHrDikp~NIll~~~---~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~eml  208 (273)
T d1u46a_         132 FIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF  208 (273)
T ss_dssp             EECSCCCGGGEEEEET---TEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred             EeeeeecHHHhccccc---cceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHH
Confidence            9999999999999877   8999999999987755543333334456788999999999999999999999999999999


Q ss_pred             h-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         168 R-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       168 ~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      + |..||.+.   +..+.+..+.....   .++.+..+|+.+.++|.+||+.||++|||+.++.+.|++.
T Consensus       209 t~G~~Pf~~~---~~~~~~~~i~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         209 TYGQEPWIGL---NGSQILHKIDKEGE---RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             TTSCCTTTTC---CHHHHHHHHHTSCC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hCCCCCCCCc---CHHHHHHHHHhCCC---CCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            8 89999874   33333344433222   2233467899999999999999999999999999988874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7e-47  Score=299.79  Aligned_cols=209  Identities=16%  Similarity=0.239  Sum_probs=178.8

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      +++.+|+.++++|.+||||+++++++.+++.+|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||++||+
T Consensus        54 ~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~-~~~l~e~~~~~~~~qi~~al~~lH~~~iv  132 (277)
T d1phka_          54 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVICALHKLNIV  132 (277)
T ss_dssp             HHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCCc
Confidence            468899999999988999999999999999999999999 9999999985 56799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC------CCCCCcchHHHHHHHH
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW------LDQSPRDDLEALCYTL  163 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~------~~~~~~~Dv~slg~~l  163 (257)
                      ||||||+||+++.+   +.+||+|||++..+....    ......||+.|+|||.+.+      ..++.++||||+||++
T Consensus       133 HrDlkp~Nill~~~---~~~kl~DFG~a~~~~~~~----~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvil  205 (277)
T d1phka_         133 HRDLKPENILLDDD---MNIKLTDFGFSCQLDPGE----KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM  205 (277)
T ss_dssp             CSCCSGGGEEECTT---CCEEECCCTTCEECCTTC----CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHH
T ss_pred             ccccccceEEEcCC---CCeEEccchheeEccCCC----ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhh
Confidence            99999999999766   899999999998765432    1245679999999999853      2457899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|+.||.+.   +.......+........ ......+|+++.+++.+||..||++||+++++++
T Consensus       206 yeml~g~~Pf~~~---~~~~~~~~i~~~~~~~~-~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         206 YTLLAGSPPFWHR---KQMLMLRMIMSGNYQFG-SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHHHSSCSSCCS---SHHHHHHHHHHTCCCCC-TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             hhhccCCCCCCCC---CHHHHHHHHHhCCCCCC-CcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            9999999999874   34444455555444332 2233679999999999999999999999998864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=9.8e-48  Score=314.29  Aligned_cols=212  Identities=22%  Similarity=0.261  Sum_probs=181.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.++++|. ||||+++++++.+++.+|+||||| |++|.+.+......+++..+..++.|++.||.|||++||
T Consensus        70 ~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i  148 (352)
T d1koba_          70 KYTVKNEISIMNQLH-HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI  148 (352)
T ss_dssp             HHHHHHHHHHHTTCC-STTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            457889999999998 999999999999999999999999 999999887556679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.. ..+.+||+|||++.......    ......+++.|+|||++.+..++.++|||||||++|+|++
T Consensus       149 iHRDiKp~NILl~~~-~~~~vkL~DFGla~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyellt  223 (352)
T d1koba_         149 VHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDE----IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS  223 (352)
T ss_dssp             ECCCCCGGGEEESST-TCCCEEECCCTTCEECCTTS----CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred             eeccccccccccccc-CCCeEEEeecccceecCCCC----ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHh
Confidence            999999999999743 33789999999998765432    1245678999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||.+.   +....+..+....... +......+|+++.++|.+||+.||.+|||++++++
T Consensus       224 G~~Pf~~~---~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         224 GLSPFAGE---DDLETLQNVKRCDWEF-DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             SCCSSCCS---SHHHHHHHHHHCCCCC-CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCC---CHHHHHHHHHhCCCCC-CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999874   3444445554443332 23344679999999999999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-47  Score=300.41  Aligned_cols=222  Identities=18%  Similarity=0.259  Sum_probs=178.2

Q ss_pred             CccCCCCCcccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHH
Q psy2769           1 MKVEPVRNPVQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMI   77 (257)
Q Consensus         1 ~k~~~~~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~   77 (257)
                      ||+.+.+...+.+.+|++++++++ ||||+++++++.. .+.+++||||+ +|+|.+++... ...+++..+..++.|++
T Consensus        35 vK~i~~~~~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~  113 (262)
T d1byga_          35 VKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC  113 (262)
T ss_dssp             EEECCCCC--HHHHHTHHHHTTCC-CTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred             EEEECcHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence            456566667788999999999997 9999999998854 45689999999 99999999754 34589999999999999


Q ss_pred             HHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHH
Q psy2769          78 SRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLE  157 (257)
Q Consensus        78 ~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~  157 (257)
                      .||.|||+.+++||||+|+||+++.+   +.++++|||++.......      ....++..|+|||.+.+..++.++|||
T Consensus       114 ~al~ylH~~~ivH~dlkp~Nil~~~~---~~~kl~dfg~s~~~~~~~------~~~~~~~~y~aPE~l~~~~~t~~sDIw  184 (262)
T d1byga_         114 EAMEYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVW  184 (262)
T ss_dssp             HHHHHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC------------------CCTTTSCHHHHHHCCCCHHHHHH
T ss_pred             hhccccccCceeccccchHhheecCC---CCEeecccccceecCCCC------ccccccccCCChHHHhCCCCChHHHHH
Confidence            99999999999999999999999876   899999999987643321      344678899999999988999999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHH
Q psy2769         158 ALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNL  236 (257)
Q Consensus       158 slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~  236 (257)
                      |||+++|||++ |.+||......+....   +..    ...++.+..+|+.+.++|.+||+.||++|||+.++++.|+++
T Consensus       185 SfG~il~el~t~~~~p~~~~~~~~~~~~---i~~----~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i  257 (262)
T d1byga_         185 SFGILLWEIYSFGRVPYPRIPLKDVVPR---VEK----GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI  257 (262)
T ss_dssp             HHHHHHHHHHTTSCCSCTTSCGGGHHHH---HTT----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHCCCCCCCCCCHHHHHHH---HHc----CCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            99999999998 7888887655443322   222    123344567899999999999999999999999999999987


Q ss_pred             HHh
Q psy2769         237 LEN  239 (257)
Q Consensus       237 ~~~  239 (257)
                      ...
T Consensus       258 ~~~  260 (262)
T d1byga_         258 KTH  260 (262)
T ss_dssp             HHH
T ss_pred             HhC
Confidence            553

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-46  Score=303.62  Aligned_cols=205  Identities=20%  Similarity=0.243  Sum_probs=178.5

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++++. ||||+++++++.+++..|+||||| |++|..++.. ...+++..+..++.|++.||.|||++
T Consensus        46 ~~~~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~  123 (316)
T d1fota_          46 KQVEHTNDERLMLSIVT-HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK-SQRFPNPVAKFYAAEVCLALEYLHSK  123 (316)
T ss_dssp             TCHHHHHHHHHHHHSCC-BTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-TSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhcc-CcChhheeeeEeeCCeeeeEeeecCCccccccccc-cccccccHHHHHHHHHHHhhhhhccC
Confidence            34567899999999998 999999999999999999999999 9999988884 66789999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++.......      ....||+.|+|||++.+..++.++||||+||++|+|
T Consensus       124 ~iiHrDiKp~NILl~~~---g~vkL~DFG~a~~~~~~~------~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyem  194 (316)
T d1fota_         124 DIIYRDLKPENILLDKN---GHIKITDFGFAKYVPDVT------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM  194 (316)
T ss_dssp             TEECCCCCGGGEEECTT---SCEEECCCSSCEECSSCB------CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred             cEEccccCchheeEcCC---CCEEEecCccceEecccc------ccccCcccccCHHHHcCCCCCchhhccccchhHHHH
Confidence            99999999999999876   899999999998764331      456799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      ++|..||.+.   +..+.+..+.......     ++.+|+++.+++.+||..||.+|+     +++++++
T Consensus       195 ltG~~Pf~~~---~~~~~~~~i~~~~~~~-----p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         195 LAGYTPFYDS---NTMKTYEKILNAELRF-----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHSSCTTCCS---SHHHHHHHHHHCCCCC-----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HhCCCCCCCc---CHHHHHHHHHcCCCCC-----CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            9999999873   4444555555443332     367899999999999999999996     7888765

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-46  Score=307.90  Aligned_cols=205  Identities=17%  Similarity=0.209  Sum_probs=178.5

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.+++.+. ||||+++++++.+....++|||++ +++|.+.+.. .+.+++..+..++.|++.||.|||++
T Consensus        83 ~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~-~~~l~e~~~~~i~~qi~~aL~yLH~~  160 (350)
T d1rdqe_          83 KQIEHTLNEKRILQAVN-FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR-IGRFSEPHARFYAAQIVLTFEYLHSL  160 (350)
T ss_dssp             TCHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcC-CCcEeecccccccccccccccccccccchhhhHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34567889999999998 999999999999999999999999 9999999985 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++.......      ....||+.|+|||++.+..++.++|||||||++|+|
T Consensus       161 ~iiHRDIKP~NILl~~~---g~ikL~DFG~a~~~~~~~------~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyem  231 (350)
T d1rdqe_         161 DLIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGRT------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM  231 (350)
T ss_dssp             TEECCCCSGGGEEECTT---SCEEECCCTTCEECSSCB------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CEecCcCCHHHcccCCC---CCEEeeeceeeeeccccc------ccccCccccCCHHHHcCCCCCccccccchhHHHHHH
Confidence            99999999999999876   899999999998764321      456799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-----ChHHHHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-----NYGKLRD  231 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-----~~~~~~~  231 (257)
                      ++|..||.+.   +....+..+.......     +..+|+.+.++|++||..||.+|+     +++++++
T Consensus       232 ltG~~Pf~~~---~~~~~~~~i~~~~~~~-----p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         232 AAGYPPFFAD---QPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHCCCCC-----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HhCCCCCCCc---CHHHHHHHHhcCCCCC-----CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            9999999863   4444555555443332     367999999999999999999995     7888764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-47  Score=305.13  Aligned_cols=220  Identities=15%  Similarity=0.193  Sum_probs=181.4

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+.+|+.++++++ ||||+++++++.++. .+++++++ +++|.+.+......+++..+..++.|++.||.|||++
T Consensus        53 ~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~-~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~  130 (317)
T d1xkka_          53 KANKEILDEAYVMASVD-NPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  130 (317)
T ss_dssp             CTHHHHHHHHHHHHHCC-CTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCC-eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            34567999999999998 999999999998764 67777888 9999999887778899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      ||+||||||+||+++.+   +.+||+|||++........... .....||+.|+|||.+.+..++.++||||||+++|||
T Consensus       131 ~iiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~~~~~-~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el  206 (317)
T d1xkka_         131 RLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYH-AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL  206 (317)
T ss_dssp             TCCCSCCCGGGEEEEET---TEEEECCCSHHHHTTTTCC---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             CcccCcchhhcceeCCC---CCeEeeccccceeccccccccc-ccccccCccccChHHHhcCCCChhhhhhhHHHHHHHH
Confidence            99999999999999877   8999999999987654432221 1345689999999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhc
Q psy2769         167 LR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENK  240 (257)
Q Consensus       167 ~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~  240 (257)
                      +| |.+||.+.+......   .+..+.    ....+..+|+.+.+++.+||+.||++|||+.++++.|.++.+..
T Consensus       207 ~t~g~~p~~~~~~~~~~~---~i~~~~----~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~  274 (317)
T d1xkka_         207 MTFGSKPYDGIPASEISS---ILEKGE----RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP  274 (317)
T ss_dssp             HTTSCCTTTTSCGGGHHH---HHHHTC----CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSH
T ss_pred             HHCCCCCCCCCCHHHHHH---HHHcCC----CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhCh
Confidence            98 899998865444322   222221    12233678999999999999999999999999999998887643

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=311.57  Aligned_cols=217  Identities=17%  Similarity=0.186  Sum_probs=176.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee----CCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS----GDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~----~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      ...+.+|+.++.++.+||||++++++|.+    +..+|+||||| ||+|.+++... ...+++.++..++.|++.||.||
T Consensus        48 ~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~yl  127 (335)
T d2ozaa1          48 CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL  127 (335)
T ss_dssp             SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHH
Confidence            35688999998888679999999999875    45789999999 89999999854 35799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l  163 (257)
                      |+.||+||||||+||+++.+...+.+||+|||++........    .....||+.|+|||++.+..++.++|||||||++
T Consensus       128 H~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvil  203 (335)
T d2ozaa1         128 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS----LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM  203 (335)
T ss_dssp             HHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCC----CCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHH
T ss_pred             HHcCCccccccccccccccccccccccccccceeeeccCCCc----cccccCCcccCCcHHHcCCCCCHHHHHHhhchhH
Confidence            999999999999999998765567899999999987654322    2556799999999999998999999999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHH-HHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQ-RVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |+|++|..||.+.........+. .+......+ +......+|+++.++|++||+.||++|||++++++
T Consensus       204 y~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         204 YILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF-PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHTTSSCSCEETTCC--------CCCSCSSSC-CTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCC-CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            99999999998754433222211 111111111 12223568999999999999999999999999876

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-46  Score=299.68  Aligned_cols=221  Identities=20%  Similarity=0.246  Sum_probs=176.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLML   72 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~   72 (257)
                      .+.+.+|..++.++.+||||+.+++++.. +...++||||| +|+|.+++....               ..+++..+..+
T Consensus        60 ~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  139 (299)
T d1ywna1          60 HRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY  139 (299)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHH
Confidence            45688899999999889999999998765 45689999999 999999997532               34889999999


Q ss_pred             HHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCC
Q psy2769          73 ADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP  152 (257)
Q Consensus        73 ~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  152 (257)
                      +.|++.||.|||++||+||||||+||+++.+   +.+||+|||+++......... ......||+.|+|||++.+..++.
T Consensus       140 ~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~-~~~~~~gt~~y~APE~l~~~~~~~  215 (299)
T d1ywna1         140 SFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYV-RKGDARLPLKWMAPETIFDRVYTI  215 (299)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCCGGGEEECGG---GCEEECC------CCSCTTSC-CTTSCCCGGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHHHhCCCcCCcCCccceeECCC---CcEEEccCcchhhcccccccc-ccCceeeCccccchhHhhcCCCCc
Confidence            9999999999999999999999999999876   899999999997654433222 224567999999999999999999


Q ss_pred             cchHHHHHHHHHHHHhC-CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         153 RDDLEALCYTLVYFLRG-KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       153 ~~Dv~slg~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++||||+||++|||++| .+||........  ....+..+    ..+..+..+|+.+.+++.+||+.||++|||++++++
T Consensus       216 ~sDiwS~Gvil~ellt~~~~p~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~  289 (299)
T d1ywna1         216 QSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FCRRLKEG----TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE  289 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCCSHH--HHHHHHHT----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccceeehHHHHHHHHhCCCCCCCCCCHHHH--HHHHHhcC----CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999986 567876543322  12222222    222334678999999999999999999999999999


Q ss_pred             HHHHHHHhc
Q psy2769         232 SFRNLLENK  240 (257)
Q Consensus       232 ~l~~~~~~~  240 (257)
                      .|+++++.+
T Consensus       290 ~L~~ilq~n  298 (299)
T d1ywna1         290 HLGNLLQAN  298 (299)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHhCC
Confidence            999998754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-46  Score=298.29  Aligned_cols=219  Identities=21%  Similarity=0.296  Sum_probs=173.6

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+++.+|+.+++++. ||||+++++++....    ..|+||||+ |++|.+++.. .+.+++.++..++.|++.||.|||
T Consensus        51 ~~~~~~E~~~l~~~~-hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~-~~~l~~~~~~~i~~qi~~al~~lH  128 (277)
T d1o6ya_          51 YLRFRREAQNAAALN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT-EGPMTPKRAIEVIADACQALNFSH  128 (277)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcc-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            457899999999998 999999999987643    478999999 9999998874 567999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.|++||||||+||+++.+   +..+++|||.+.................||+.|+|||++.+..++.++||||+||++|
T Consensus       129 ~~~iiHrDiKP~NIll~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvily  205 (277)
T d1o6ya_         129 QNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY  205 (277)
T ss_dssp             HTTEECCCCSGGGEEEETT---SCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             hCCccCccccCcccccCcc---ccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHH
Confidence            9999999999999999877   8899999999876655443333335668999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC-ChHHHHHHHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP-NYGKLRDSFRNLL  237 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp-~~~~~~~~l~~~~  237 (257)
                      +|++|..||.+.   +..+....+... .+..+......+|+.+.++|.+||+.||++|| +++++++.|.++.
T Consensus       206 elltG~~Pf~~~---~~~~~~~~~~~~-~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         206 EVLTGEPPFTGD---SPVSVAYQHVRE-DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HHHHSSCSCCCS---SHHHHHHHHHHC-CCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCc---CHHHHHHHHHhc-CCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            999999999874   233333332222 22233444578999999999999999999999 8999988887764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-47  Score=305.31  Aligned_cols=212  Identities=17%  Similarity=0.199  Sum_probs=182.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+.+|+.+++.++ ||||+++++++.+++.+|+||||| |++|.+++...+..+++.++..++.|++.||.|||++||
T Consensus        45 ~~~~~~Ei~il~~l~-HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~i  123 (321)
T d1tkia_          45 QVLVKKEISILNIAR-HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI  123 (321)
T ss_dssp             HHHHHHHHHHHHHSC-CTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhCC-CCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence            456889999999998 999999999999999999999999 899999998655679999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHHHh
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l~~  168 (257)
                      +||||||+||+++.+ ....++|+|||++.......    ......+++.|+|||...+..++.++||||+||++|+|++
T Consensus       124 iHrDlKp~NIll~~~-~~~~ikl~DFG~~~~~~~~~----~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~  198 (321)
T d1tkia_         124 GHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS  198 (321)
T ss_dssp             ECCCCCGGGEEESSS-SCCCEEECCCTTCEECCTTC----EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH
T ss_pred             CcccccccceeecCC-CceEEEEcccchhhccccCC----cccccccccccccchhccCCCCCchhhcccHHHHHHHHHh
Confidence            999999999999764 33689999999998764432    1244578999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |..||...   +....+..+....... +......+|+++.++|++||..||.+|||++++++
T Consensus       199 G~~Pf~~~---~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         199 GINPFLAE---TNQQIIENIMNAEYTF-DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             SSCTTCCS---SHHHHHHHHHHTCCCC-CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCC---CHHHHHHHHHhCCCCC-ChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999874   4444455555544433 34445689999999999999999999999999976

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-46  Score=298.53  Aligned_cols=219  Identities=18%  Similarity=0.217  Sum_probs=185.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------------KRFSLKTVLML   72 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------------~~~~~~~~~~~   72 (257)
                      ....+.+|+..+.++.+||||+++++++.+++..++||||+ +|+|.+++....               ..+++.++..+
T Consensus        61 ~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  140 (299)
T d1fgka_          61 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC  140 (299)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHH
Confidence            34678889999999977999999999999999999999999 999999997542               45899999999


Q ss_pred             HHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCC
Q psy2769          73 ADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSP  152 (257)
Q Consensus        73 ~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~  152 (257)
                      +.|++.||.|||+.|++||||||+||+++.+   +.+||+|||++.......... ......+++.|+|||.+.+..++.
T Consensus       141 ~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~---~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~y~~  216 (299)
T d1fgka_         141 AYQVARGMEYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYK-KTTNGRLPVKWMAPEALFDRIYTH  216 (299)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEECTT---CCEEECSTTCCCCGGGCCTTC-CCTTSCCGGGGSCHHHHHHCCCCH
T ss_pred             HHHHHHHHHHhhhCCEEeeeecccceeecCC---CCeEeccchhhcccccccccc-ccccCCCChhhhhhhHhcCCCCCc
Confidence            9999999999999999999999999999876   899999999998765543332 225567899999999999999999


Q ss_pred             cchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         153 RDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       153 ~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ++||||||+++|||++ |.+||.....   ......+..+    ..+..+..+|+.+.++|.+||+.||++|||+.++++
T Consensus       217 k~DiwS~Gvvl~ell~~g~~p~~~~~~---~~~~~~i~~~----~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         217 QSDVWSFGVLLWEIFTLGGSPYPGVPV---EELFKLLKEG----HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCH---HHHHHHHHTT----CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhHHhHHHHHHhccCCCCCCCCCCH---HHHHHHHHcC----CCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            9999999999999998 7888886432   3333333222    223344689999999999999999999999999999


Q ss_pred             HHHHHHH
Q psy2769         232 SFRNLLE  238 (257)
Q Consensus       232 ~l~~~~~  238 (257)
                      .|++++.
T Consensus       290 ~L~~i~a  296 (299)
T d1fgka_         290 DLDRIVA  296 (299)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9998864

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-46  Score=297.27  Aligned_cols=222  Identities=18%  Similarity=0.186  Sum_probs=176.8

Q ss_pred             CCcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769           7 RNPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus         7 ~~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ....+.|.+|+.++.+++ ||||+++++++.. +..++||||+ +|+|.+++... ...+++..+..++.|++.||+|||
T Consensus        53 ~~~~~~~~~E~~~l~~l~-h~nIv~~~g~~~~-~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH  130 (285)
T d1fmka3          53 TMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE  130 (285)
T ss_dssp             SSCHHHHHHHHHHHHHCC-CTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHhcc-cCCEeEEEEEEec-CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Confidence            345578999999999998 9999999999865 4589999999 99999888754 467999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLV  164 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~  164 (257)
                      +.|++||||||+||+++.+   +.+||+|||++.........  ......+++.|+|||.+....++.++||||||+++|
T Consensus       131 ~~~ivH~DlKp~NIll~~~---~~~kl~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~  205 (285)
T d1fmka3         131 RMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT  205 (285)
T ss_dssp             HTTCCCSCCSGGGEEECGG---GCEEECCCCTTC----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hhheecccccceEEEECCC---CcEEEcccchhhhccCCCce--eeccccccccccChHHHhCCCCCcHHhhhcchHHHH
Confidence            9999999999999999876   89999999999765433211  113456899999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         165 YFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      ||++|..||...  ....+.+..+...    ...+....+|+.+.++|.+||+.||++||+++++++.|++++.+..
T Consensus       206 el~t~~~p~~~~--~~~~~~~~~i~~~----~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         206 ELTTKGRVPYPG--MVNREVLDQVERG----YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             HHHTTTCCSSTT--CCHHHHHHHHHTT----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             HHHhCCCCCCCC--CCHHHHHHHHHhc----CCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            999965555543  2333333333322    1223447899999999999999999999999999999998876543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-46  Score=300.18  Aligned_cols=208  Identities=21%  Similarity=0.219  Sum_probs=175.6

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+.+..|..++.+..+||||+++++++.+++..|+||||+ +|+|.+++.. ...+++..+..++.|++.||.|||++
T Consensus        44 ~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~-~~~~~e~~~~~~~~qi~~al~ylH~~  122 (320)
T d1xjda_          44 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS-CHKFDLSRATFYAAEIILGLQFLHSK  122 (320)
T ss_dssp             TCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHH-HSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            345567888888775444999999999999999999999999 9999999985 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVYF  166 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~l  166 (257)
                      |++||||||+||+++.+   +.+||+|||++........   ......||+.|+|||++.+..++.++||||+||++|+|
T Consensus       123 ~iiHrDikp~NiL~~~~---~~~kl~DFG~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyem  196 (320)
T d1xjda_         123 GIVYRDLKLDNILLDKD---GHIKIADFGMCKENMLGDA---KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM  196 (320)
T ss_dssp             TCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTC---CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             CeeeccCcccceeecCC---Cceeccccchhhhcccccc---cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHH
Confidence            99999999999999866   8999999999976544322   22456799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChH-HHH
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYG-KLR  230 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~-~~~  230 (257)
                      ++|+.||.+.   +....+..+.....     ..+..+|+.+.++|++||..||++||++. +++
T Consensus       197 ltG~~PF~~~---~~~~~~~~i~~~~~-----~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         197 LIGQSPFHGQ---DEEELFHSIRMDNP-----FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHSSCSSCCS---SHHHHHHHHHHCCC-----CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HhCCCCCCCC---CHHHHHHHHHcCCC-----CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence            9999999874   34444444443322     23367899999999999999999999985 664

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-46  Score=301.08  Aligned_cols=217  Identities=18%  Similarity=0.256  Sum_probs=181.0

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-----------------------CCCC
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-----------------------KRFS   65 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-----------------------~~~~   65 (257)
                      .+++.+|+.++++++ ||||+++++++......+++||++ +++|.+++....                       ..++
T Consensus        60 ~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  138 (301)
T d1lufa_          60 QADFQREAALMAEFD-NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS  138 (301)
T ss_dssp             HHHHHHHHHHHHTCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCC
T ss_pred             HHHHHHHHHHHHhcC-CCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCC
Confidence            467999999999998 999999999999999999999999 999999997431                       2488


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHh
Q psy2769          66 LKTVLMLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAH  145 (257)
Q Consensus        66 ~~~~~~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~  145 (257)
                      ...+..++.|++.||+|||+.|++||||||+||+++.+   +.+||+|||++......... .......+++.|+|||.+
T Consensus       139 ~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~---~~~Kl~DFGls~~~~~~~~~-~~~~~~~~~~~y~aPE~~  214 (301)
T d1lufa_         139 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYY-KADGNDAIPIRWMPPESI  214 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCB-C----CCBCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCC---CcEEEccchhheeccCCccc-cccCCCCcCcCcCCHHHH
Confidence            89999999999999999999999999999999999876   89999999998755433221 122456788999999999


Q ss_pred             cCCCCCCcchHHHHHHHHHHHHhCC-CCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCC
Q psy2769         146 QWLDQSPRDDLEALCYTLVYFLRGK-LPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEP  224 (257)
Q Consensus       146 ~~~~~~~~~Dv~slg~~l~~l~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  224 (257)
                      .+..++.++||||||+++|||++|. +||.+.   +..+.+..+....    .++.+..+|+++.+++..||+.||++||
T Consensus       215 ~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~---~~~e~~~~v~~~~----~~~~p~~~~~~~~~li~~cl~~~P~~RP  287 (301)
T d1lufa_         215 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM---AHEEVIYYVRDGN----ILACPENCPLELYNLMRLCWSKLPADRP  287 (301)
T ss_dssp             HHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS---CHHHHHHHHHTTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             ccCCCChhhhhccchhhHHHHHccCCCCCCCC---CHHHHHHHHHcCC----CCCCCccchHHHHHHHHHHcCCChhHCc
Confidence            9999999999999999999999985 677764   3334444443332    2334468999999999999999999999


Q ss_pred             ChHHHHHHHHHHHH
Q psy2769         225 NYGKLRDSFRNLLE  238 (257)
Q Consensus       225 ~~~~~~~~l~~~~~  238 (257)
                      |+.++.+.|+++++
T Consensus       288 t~~ev~~~L~~i~~  301 (301)
T d1lufa_         288 SFCSIHRILQRMCE  301 (301)
T ss_dssp             CHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHhcC
Confidence            99999999998753

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-46  Score=300.13  Aligned_cols=220  Identities=16%  Similarity=0.227  Sum_probs=182.3

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHh---------------cCCCCHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYC---------------SKRFSLKTVLM   71 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~---------------~~~~~~~~~~~   71 (257)
                      ...+.+.+|+.++.++.+||||+++++++...+..++||||+ +|+|.+++...               ...+++..+..
T Consensus        52 ~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  131 (309)
T d1fvra_          52 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  131 (309)
T ss_dssp             ---CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHH
Confidence            356689999999999966999999999999999999999999 99999999743               35799999999


Q ss_pred             HHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCC
Q psy2769          72 LADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQS  151 (257)
Q Consensus        72 ~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  151 (257)
                      ++.|++.||.|+|+.|++||||||+||+++.+   +.+||+|||++........    .....+|..|+|||.+.+..++
T Consensus       132 ~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~---~~~kl~DfG~a~~~~~~~~----~~~~~gt~~y~aPE~l~~~~~~  204 (309)
T d1fvra_         132 FAADVARGMDYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYVK----KTMGRLPVRWMAIESLNYSVYT  204 (309)
T ss_dssp             HHHHHHHHHHHHHHTTEECSCCSGGGEEECGG---GCEEECCTTCEESSCEECC----C----CCTTTCCHHHHHHCEEC
T ss_pred             HHHHHHHHHHhhhcCCccccccccceEEEcCC---CceEEcccccccccccccc----ccceecCCcccchHHhccCCCC
Confidence            99999999999999999999999999999877   8999999999875443321    1345689999999999999999


Q ss_pred             CcchHHHHHHHHHHHHhCC-CCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHH
Q psy2769         152 PRDDLEALCYTLVYFLRGK-LPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLR  230 (257)
Q Consensus       152 ~~~Dv~slg~~l~~l~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~  230 (257)
                      .++||||||+++|||++|. +||.+.   +..+.+..+..+    ..+..+..+|+.+.++|.+||+.||++|||+++++
T Consensus       205 ~~sDvwSfGvil~ell~~~~~p~~~~---~~~~~~~~i~~~----~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil  277 (309)
T d1fvra_         205 TNSDVWSYGVLLWEIVSLGGTPYCGM---TCAELYEKLPQG----YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL  277 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCTTTTC---CHHHHHHHGGGT----CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             ccceeehhHHHHHHHHhcCCCCCCCC---CHHHHHHHHHhc----CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            9999999999999999965 567663   333333333322    22333467899999999999999999999999999


Q ss_pred             HHHHHHHHhcc
Q psy2769         231 DSFRNLLENKE  241 (257)
Q Consensus       231 ~~l~~~~~~~~  241 (257)
                      +.|++++++..
T Consensus       278 ~~L~~i~~~~~  288 (309)
T d1fvra_         278 VSLNRMLEERK  288 (309)
T ss_dssp             HHHHHHHHSSS
T ss_pred             HHHHHHHhcCc
Confidence            99999998655

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-45  Score=298.00  Aligned_cols=222  Identities=15%  Similarity=0.211  Sum_probs=184.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc-----------------CCCCHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS-----------------KRFSLKTVL   70 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~-----------------~~~~~~~~~   70 (257)
                      ....+.+|+.++.++.+||||+++++++......+++|||| +++|.+++....                 ..+++..+.
T Consensus        69 ~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (311)
T d1t46a_          69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL  148 (311)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHH
Confidence            44578999999999977999999999999999999999999 999999997532                 258899999


Q ss_pred             HHHHHHHHHHHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC
Q psy2769          71 MLADQMISRLEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ  150 (257)
Q Consensus        71 ~~~~~i~~~l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  150 (257)
                      .++.|++.||+|||++|++||||||+||+++.+   +.++++|||.+.......... ......+|+.|+|||.+.+..+
T Consensus       149 ~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~---~~~ki~DfG~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~  224 (311)
T d1t46a_         149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHG---RITKICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVY  224 (311)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT---TEEEECCCGGGSCTTSCTTSE-ECSSSEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHhCCeeeccccccccccccc---CcccccccchheeccCCCcce-EeeecccChHHcCHHHhcCCCC
Confidence            999999999999999999999999999999876   899999999998765443222 2245678999999999999899


Q ss_pred             CCcchHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHH
Q psy2769         151 SPRDDLEALCYTLVYFLR-GKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKL  229 (257)
Q Consensus       151 ~~~~Dv~slg~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~  229 (257)
                      +.++||||||+++|||++ |.+||........   +..+......   +..+..+|+.+.+||..||+.||++|||++++
T Consensus       225 ~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~---~~~~i~~~~~---~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~i  298 (311)
T d1t46a_         225 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSK---FYKMIKEGFR---MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI  298 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH---HHHHHHHTCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCcccccchHHHHHHHHhCCCCCCCCCCHHHH---HHHHHhcCCC---CCCcccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence            999999999999999998 6666666443322   2222222222   22235689999999999999999999999999


Q ss_pred             HHHHHHHHHhc
Q psy2769         230 RDSFRNLLENK  240 (257)
Q Consensus       230 ~~~l~~~~~~~  240 (257)
                      ++.|++.+...
T Consensus       299 l~~L~~~i~~~  309 (311)
T d1t46a_         299 VQLIEKQISES  309 (311)
T ss_dssp             HHHHHHHHHHT
T ss_pred             HHHHHHhhccC
Confidence            99999988754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-45  Score=293.57  Aligned_cols=212  Identities=17%  Similarity=0.133  Sum_probs=172.2

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIV   89 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~   89 (257)
                      .+.+.+|+.++++++ ||||+++++++.+++..|+||||+.+++...+......+++..+..++.|++.||.|||++|++
T Consensus        44 ~~~~~~Ei~il~~l~-hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ii  122 (299)
T d1ua2a_          44 NRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL  122 (299)
T ss_dssp             CTHHHHHHHHHHHCC-CTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHhCC-CCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcccee
Confidence            456889999999998 9999999999999999999999994444444443467799999999999999999999999999


Q ss_pred             ccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHHHHHHHh
Q psy2769          90 HRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYTLVYFLR  168 (257)
Q Consensus        90 H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~l~~l~~  168 (257)
                      ||||||+||+++.+   +.+||+|||++.........   .....+|+.|+|||++.+. .++.++||||+||++|+|++
T Consensus       123 HrDiKp~NIli~~~---~~~KL~DFG~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~  196 (299)
T d1ua2a_         123 HRDLKPNNLLLDEN---GVLKLADFGLAKSFGSPNRA---YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL  196 (299)
T ss_dssp             CCCCCGGGEEECTT---CCEEECCCGGGSTTTSCCCC---CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccCCcceEEecCC---CccccccCccccccCCCccc---ccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHh
Confidence            99999999999866   89999999999765443221   1456799999999998755 56899999999999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHHHhhC-----------------------ChhhhhcCCcHHHHHHHHHHhcCCCCCCCC
Q psy2769         169 GKLPWQSIKSDNEETRMQRVTEMKLTM-----------------------TPEAICEGTPPEFAEFLRYCRGLAFSEEPN  225 (257)
Q Consensus       169 g~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  225 (257)
                      |.+||.+..   ..+.+..+.+.....                       ......+.+++.+.++|.+||..||++|||
T Consensus       197 g~~pf~~~~---~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s  273 (299)
T d1ua2a_         197 RVPFLPGDS---DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  273 (299)
T ss_dssp             SSCSSCCSS---HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             CcCCCCCCC---HHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcC
Confidence            999998743   333333333321110                       112233467899999999999999999999


Q ss_pred             hHHHHH
Q psy2769         226 YGKLRD  231 (257)
Q Consensus       226 ~~~~~~  231 (257)
                      ++++++
T Consensus       274 a~e~L~  279 (299)
T d1ua2a_         274 ATQALK  279 (299)
T ss_dssp             HHHHHT
T ss_pred             HHHHhC
Confidence            999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.5e-45  Score=301.39  Aligned_cols=206  Identities=21%  Similarity=0.276  Sum_probs=169.6

Q ss_pred             ccHHHHHHHHHhc--CCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q psy2769          12 RLFWERNFYEKLH--GAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKI   88 (257)
Q Consensus        12 ~~~~E~~~~~~l~--~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i   88 (257)
                      .+.+|..++..++  +||||+++++++.+.+..|+||||| |++|.+++.. ...+++..+..++.|++.||.|||++|+
T Consensus        50 ~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~ylH~~~i  128 (364)
T d1omwa3          50 LALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFYAAEIILGLEHMHNRFV  128 (364)
T ss_dssp             HHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHh-cccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            4555655555443  3999999999999999999999999 9999999985 5678999999999999999999999999


Q ss_pred             cccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHHHHHH
Q psy2769          89 VHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTLVYFL  167 (257)
Q Consensus        89 ~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l~~l~  167 (257)
                      +||||||+||+++.+   +.+||+|||++..+....     .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus       129 iHrDlKP~NILl~~~---g~iKl~DFGla~~~~~~~-----~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyeml  200 (364)
T d1omwa3         129 VYRDLKPANILLDEH---GHVRISDLGLACDFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL  200 (364)
T ss_dssp             ECCCCSGGGEEECSS---SCEEECCCTTCEECSSSC-----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             cceeeccceeEEcCC---CcEEEeeeceeeecCCCc-----ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHH
Confidence            999999999999766   899999999998765432     245679999999999974 56899999999999999999


Q ss_pred             hCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-----hHHHHH
Q psy2769         168 RGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-----YGKLRD  231 (257)
Q Consensus       168 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~~~  231 (257)
                      +|+.||......+.......     ........+..+|+.+.++|.+||..||++||+     ++++++
T Consensus       201 tG~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         201 RGHSPFRQHKTKDKHEIDRM-----TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HSSCSSCSSCSSCHHHHHHH-----SSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             hCCCCCCCCCHHHHHHHHHh-----cccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            99999988655544332221     112223334679999999999999999999998     566654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-44  Score=291.72  Aligned_cols=223  Identities=16%  Similarity=0.191  Sum_probs=182.4

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee-CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS-GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~-~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..+++.+|+.++.+++ ||||+++++++.. ++..++||||| +++|.+++......++...+..++.|++.||.|+|+.
T Consensus        71 ~~~~~~~E~~~l~~l~-HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~  149 (311)
T d1r0pa_          71 EVSQFLTEGIIMKDFS-HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK  149 (311)
T ss_dssp             HHHHHHHHHHHHHTCC-CTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCC-CCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc
Confidence            4567999999999998 9999999999765 45789999999 9999999986667788999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCCCCCCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~l~~  165 (257)
                      +|+||||||+||+++.+   +.+||+|||++.......... .......+|+.|+|||.+.+..++.++||||||+++||
T Consensus       150 ~iiHrDLK~~NILl~~~---~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~E  226 (311)
T d1r0pa_         150 KFVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE  226 (311)
T ss_dssp             TCCCSCCSGGGEEECTT---CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             CcccCCccHHhEeECCC---CCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHH
Confidence            99999999999999766   899999999998765432221 12234578999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |++|..||.....  .......+..+.    .+..+..+|+.+.++|.+||+.||++||++.++++.|++++....
T Consensus       227 l~t~~~p~~~~~~--~~~~~~~i~~g~----~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~  296 (311)
T d1r0pa_         227 LMTRGAPPYPDVN--TFDITVYLLQGR----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  296 (311)
T ss_dssp             HHTTSCCSCC--------CHHHHHTTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             HHHCCCCCCCCCC--HHHHHHHHHcCC----CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhh
Confidence            9998777765322  222222233322    222336789999999999999999999999999999999987543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-44  Score=290.95  Aligned_cols=213  Identities=16%  Similarity=0.158  Sum_probs=173.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYC-SKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+++.+|+.+++++. ||||+++++++.++...|+||||+++++.+++... ...+++..+..++.|++.||.|||++|
T Consensus        44 ~~~~~~~Ei~il~~l~-Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~  122 (298)
T d1gz8a_          44 VPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR  122 (298)
T ss_dssp             CCHHHHHHHHHHTTCC-CTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhCC-CCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            4678899999999998 99999999999999999999999977777766544 567999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~l  166 (257)
                      |+||||||+||+++.+   +.+||+|||.+........   ......|++.|+|||.+....+ +.++|+||+||++|+|
T Consensus       123 IiHrDiKpeNIl~~~~---~~~kl~DFG~a~~~~~~~~---~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m  196 (298)
T d1gz8a_         123 VLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVR---TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM  196 (298)
T ss_dssp             CCCSCCCGGGEEECTT---SCEEECSTTHHHHHCCCSB---CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             EEccccCchheeeccc---CcceeccCCcceeccCCcc---cceeecccceeeehhhhccccCCCccccccccchhhhHH
Confidence            9999999999999766   8899999999976543321   2245689999999999877664 7899999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhCC------------------------hhhhhcCCcHHHHHHHHHHhcCCCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTMT------------------------PEAICEGTPPEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~li~~~l~~~p~~  222 (257)
                      ++|+.||.+.+.   ...+..+........                        .......+++++.+++++||..||++
T Consensus       197 ~~G~~Pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~  273 (298)
T d1gz8a_         197 VTRRALFPGDSE---IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK  273 (298)
T ss_dssp             HHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTT
T ss_pred             hhCCCCCCCCCH---HHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhH
Confidence            999999987432   223333322211100                        11223467889999999999999999


Q ss_pred             CCChHHHHH
Q psy2769         223 EPNYGKLRD  231 (257)
Q Consensus       223 Rp~~~~~~~  231 (257)
                      |||++++++
T Consensus       274 R~t~~ell~  282 (298)
T d1gz8a_         274 RISAKAALA  282 (298)
T ss_dssp             SCCHHHHHT
T ss_pred             CcCHHHHhC
Confidence            999999876

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-44  Score=284.45  Aligned_cols=200  Identities=19%  Similarity=0.303  Sum_probs=169.3

Q ss_pred             ccccHHHHHHHHHhc-CCCCCcEEEeeeeeCCccEEEEecc-C-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769          10 VQRLFWERNFYEKLH-GAPGVPHVMGYGTSGDYNILVMELL-G-PSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~-~~~~i~~~~~~~~~~~~~~~v~e~~-~-~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ..++.+|+.+++++. +||||+++++++.+.+..++|||++ + +++.+++.. ...+++.++..++.|++.||.|||+.
T Consensus        51 ~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~-~~~l~e~~~~~~~~qi~~al~~lH~~  129 (273)
T d1xwsa_          51 GTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITE-RGALQEELARSFFWQVLEAVRHCHNC  129 (273)
T ss_dssp             CCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHH-HCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456889999999997 4899999999999999999999999 5 678888774 56799999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC-CCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ-SPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Dv~slg~~l~~  165 (257)
                      ||+||||||+||+++.+  .+.+||+|||++......     ......||+.|+|||++.+..+ +.++||||+||++|+
T Consensus       130 ~iiHrDiKp~NIll~~~--~~~vkl~DFG~a~~~~~~-----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilye  202 (273)
T d1xwsa_         130 GVLHRDIKDENILIDLN--RGELKLIDFGSGALLKDT-----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  202 (273)
T ss_dssp             TEECSCCSGGGEEEETT--TTEEEECCCTTCEECCSS-----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             CCccccCcccceEEecC--CCeEEECccccceecccc-----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehh
Confidence            99999999999999743  368999999999764332     1245679999999999987765 577999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      |++|..||...         ..+......     ....+|+++.++|++||..||++|||++++++
T Consensus       203 ll~g~~Pf~~~---------~~i~~~~~~-----~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         203 MVCGDIPFEHD---------EEIIRGQVF-----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHSSCSCCSH---------HHHHHCCCC-----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhhCCCCCCCc---------hHHhhcccC-----CCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            99999999862         112222222     23679999999999999999999999999875

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-43  Score=284.44  Aligned_cols=214  Identities=17%  Similarity=0.163  Sum_probs=170.7

Q ss_pred             CcccccHHHHHHHHHhc--CCCCCcEEEeeeee-----CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLH--GAPGVPHVMGYGTS-----GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISR   79 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~--~~~~i~~~~~~~~~-----~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~   79 (257)
                      .....+.+|+.+++.|.  +||||+++++++..     ....+++||++ ++++..........+++..+..++.|++.|
T Consensus        49 ~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  128 (305)
T d1blxa_          49 GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRG  128 (305)
T ss_dssp             SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHH
Confidence            34556889999998884  59999999998853     34689999999 554444444346679999999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEAL  159 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~sl  159 (257)
                      |.|||++||+||||||+||+++.+   +.+||+|||++......    .......||+.|+|||++.+..++.++||||+
T Consensus       129 L~yLH~~~ivHrDiKp~NILi~~~---~~~kl~dfg~~~~~~~~----~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSl  201 (305)
T d1blxa_         129 LDFLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQ----MALTSVVVTLWYRAPEVLLQSSYATPVDLWSV  201 (305)
T ss_dssp             HHHHHHTTCCCCCCCGGGEEECTT---CCEEECSCCSCCCCCGG----GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHH
T ss_pred             HHHHHhCCEEecCCCccEEEEcCC---CCeeecchhhhhhhccc----ccCCCcccChhhcCcchhcCCCCChhehhhch
Confidence            999999999999999999999866   89999999998654322    22256789999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh----------------------CChhhhhcCCcHHHHHHHHHHhc
Q psy2769         160 CYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT----------------------MTPEAICEGTPPEFAEFLRYCRG  217 (257)
Q Consensus       160 g~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~li~~~l~  217 (257)
                      ||++|+|++|..||.+.+   ..+.+..+......                      .........+++.+.+||++||.
T Consensus       202 G~il~ell~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~  278 (305)
T d1blxa_         202 GCIFAEMFRRKPLFRGSS---DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT  278 (305)
T ss_dssp             HHHHHHHHHSSCSCCCSS---HHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHCCCCCCCCC---HHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCc
Confidence            999999999999998743   33333333332111                      11223345688999999999999


Q ss_pred             CCCCCCCChHHHHH
Q psy2769         218 LAFSEEPNYGKLRD  231 (257)
Q Consensus       218 ~~p~~Rp~~~~~~~  231 (257)
                      .||++|||++++++
T Consensus       279 ~dP~~R~sa~e~L~  292 (305)
T d1blxa_         279 FNPAKRISAYSALS  292 (305)
T ss_dssp             SSTTTSCCHHHHHT
T ss_pred             CChhHCcCHHHHhc
Confidence            99999999999865

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-44  Score=289.10  Aligned_cols=217  Identities=18%  Similarity=0.237  Sum_probs=181.7

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCS---------KRFSLKTVLMLADQMISR   79 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~---------~~~~~~~~~~~~~~i~~~   79 (257)
                      ...+.+|+.+++++. ||||+++++++......++||||+ +|+|.+++....         ..++...+..++.|++.|
T Consensus        67 ~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~g  145 (308)
T d1p4oa_          67 RIEFLNEASVMKEFN-CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG  145 (308)
T ss_dssp             HHHHHHHHHHGGGCC-CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC-CCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHH
Confidence            346889999999998 999999999999999999999999 999999987531         347889999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEAL  159 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~sl  159 (257)
                      |.|||+.+++||||||+||+++.+   +.+||+|||++.......... ......+++.|+|||.+.+..++.++|||||
T Consensus       146 l~~LH~~~ivHrDlk~~NiLld~~---~~~Kl~DFGla~~~~~~~~~~-~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~  221 (308)
T d1p4oa_         146 MAYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSF  221 (308)
T ss_dssp             HHHHHHTTCBCSCCSGGGEEECTT---CCEEECCTTCCCGGGGGGCEE-GGGSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             HHHHhhCCeeeceEcCCceeecCC---ceEEEeecccceeccCCccee-eccceecccccCCHHHHccCCCCcccccccH
Confidence            999999999999999999999866   899999999987654432221 2244578999999999999999999999999


Q ss_pred             HHHHHHHHhC-CCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHH
Q psy2769         160 CYTLVYFLRG-KLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRDSFRNLLE  238 (257)
Q Consensus       160 g~~l~~l~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~  238 (257)
                      |+++|||++| .+||.+.   +..+.+..+..+.    .+..+..+|+.+.+++.+||+.||++|||++++++.|++.++
T Consensus       222 G~il~El~t~~~~p~~~~---~~~~~~~~i~~~~----~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         222 GVVLWEIATLAEQPYQGL---SNEQVLRFVMEGG----LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HHHHHHHHHTSCCTTTTS---CHHHHHHHHHTTC----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHHHhCCCCCCCCC---CHHHHHHHHHhCC----CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            9999999997 5778764   3334444443322    223346789999999999999999999999999999887765

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.2e-43  Score=281.73  Aligned_cols=214  Identities=17%  Similarity=0.208  Sum_probs=172.0

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ...+++.+|+.++++++ ||||+++++++.+++..+++++++++++...+....+.+++..+..++.|++.||.|||+.|
T Consensus        42 ~~~~~~~~E~~il~~l~-hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~  120 (286)
T d1ob3a_          42 GIPSTTIREISILKELK-HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR  120 (286)
T ss_dssp             CCCHHHHHHHHGGGGCC-CTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCC-CCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCc
Confidence            34568999999999998 99999999999999999999999966666666656778999999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVYF  166 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~l  166 (257)
                      |+||||||+||+++.+   +.+|++|||.+........   ......+++.|+|||.+.+.. ++.++||||+|+++|+|
T Consensus       121 IvHrDiKp~NIll~~~---~~~kl~DfG~a~~~~~~~~---~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el  194 (286)
T d1ob3a_         121 VLHRDLKPQNLLINRE---GELKIADFGLARAFGIPVR---KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM  194 (286)
T ss_dssp             CCCSCCCGGGEEECTT---SCEEECCTTHHHHHCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred             EEecCCCCceeeEcCC---CCEEecccccceecccCcc---ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHH
Confidence            9999999999999876   8999999999877644321   124457899999999997654 58999999999999999


Q ss_pred             HhCCCCCCCCCCccHHHHHHHHHHHHhhC------------------------ChhhhhcCCcHHHHHHHHHHhcCCCCC
Q psy2769         167 LRGKLPWQSIKSDNEETRMQRVTEMKLTM------------------------TPEAICEGTPPEFAEFLRYCRGLAFSE  222 (257)
Q Consensus       167 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~  222 (257)
                      ++|+.||.+...   .+.+.++.......                        ........+++.+.++|++||..||++
T Consensus       195 ~~G~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~  271 (286)
T d1ob3a_         195 VNGTPLFPGVSE---ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ  271 (286)
T ss_dssp             HHSSCSCCCSSH---HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTT
T ss_pred             HHCCCCCCCCCH---HHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhH
Confidence            999999987533   33333333221110                        112334568899999999999999999


Q ss_pred             CCChHHHHH
Q psy2769         223 EPNYGKLRD  231 (257)
Q Consensus       223 Rp~~~~~~~  231 (257)
                      |||++++++
T Consensus       272 R~s~~ell~  280 (286)
T d1ob3a_         272 RITAKQALE  280 (286)
T ss_dssp             SCCHHHHHT
T ss_pred             CcCHHHHhc
Confidence            999999863

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-42  Score=279.67  Aligned_cols=207  Identities=19%  Similarity=0.268  Sum_probs=170.9

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC------ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD------YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~------~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+++.+|+.+++.++ ||||+++++++...+      .+|+||||++.+|..+..  ...+++..+..++.|++.||.||
T Consensus        61 ~~~~~~Ei~il~~l~-hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~~~~qi~~aL~~L  137 (346)
T d1cm8a_          61 AKRAYRELRLLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGEDRIQFLVYQMLKGLRYI  137 (346)
T ss_dssp             HHHHHHHHHHHHHCC-BTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCeeEEEEEeccCccccccceEEEEEecccccHHHHHH--hccccHHHHHHHHHHHHHHHHHH
Confidence            457889999999998 999999999987654      479999999989988877  46799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg~~  162 (257)
                      |++||+||||||+||+++.+   +.++++|||.+.......      ....+++.|+|||.+.+. .++.++||||+||+
T Consensus       138 H~~~IiHrDiKp~NIL~~~~---~~~kl~Dfg~a~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (346)
T d1cm8a_         138 HAAGIIHRDLKPGNLAVNED---CELKILDFGLARQADSEM------TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI  208 (346)
T ss_dssp             HHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCSSC------CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred             HhCCCcccccCcchhhcccc---cccccccccceeccCCcc------ccccccccccCHHHHcCCCCCCccchhhcchHH
Confidence            99999999999999999876   899999999998754321      456799999999998765 46899999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhh--------------------------CChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLT--------------------------MTPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|+|++|..||.+......   +..+......                          .........+++.+.+||++||
T Consensus       209 l~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL  285 (346)
T d1cm8a_         209 MAEMITGKTLFKGSDHLDQ---LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKML  285 (346)
T ss_dssp             HHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS
T ss_pred             HHHHHHCcCCCCCCChHHH---HHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHC
Confidence            9999999999987533222   2222111111                          1112233567899999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++|||++++++
T Consensus       286 ~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         286 VLDAEQRVTAGEALA  300 (346)
T ss_dssp             CSSTTTSCCHHHHHH
T ss_pred             cCChhHCcCHHHHhc
Confidence            999999999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-42  Score=283.48  Aligned_cols=216  Identities=15%  Similarity=0.161  Sum_probs=170.3

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-----ccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-----YNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-----~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      .+++.+|+.++++|. ||||+++++++....     ..|+++++++++|.+++.  ...+++..+..++.|++.||.|||
T Consensus        50 ~~~~~~Ei~il~~l~-hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~--~~~l~~~~i~~i~~qil~al~yLH  126 (345)
T d1pmea_          50 CQRTLREIKILLRFR-HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK--TQHLSNDHICYFLYQILRGLKYIH  126 (345)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC-CCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhh--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            457889999999998 999999999987543     345555555999999998  457999999999999999999999


Q ss_pred             hCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcC-CCCCCcchHHHHHHHH
Q psy2769          85 RKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQW-LDQSPRDDLEALCYTL  163 (257)
Q Consensus        85 ~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv~slg~~l  163 (257)
                      ++||+||||||+||+++.+   +.+||+|||++.................+++.|+|||++.. ..++.++||||+|+++
T Consensus       127 ~~~iiHRDIKp~NILl~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il  203 (345)
T d1pmea_         127 SANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL  203 (345)
T ss_dssp             HTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHH
T ss_pred             HCCCcCCCCCcceEEECCC---CCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCcee
Confidence            9999999999999999866   89999999999876554433333356779999999999854 4568899999999999


Q ss_pred             HHHHhCCCCCCCCCCccHHHHHHHHH-----------------HHH------hhCChhhhhcCCcHHHHHHHHHHhcCCC
Q psy2769         164 VYFLRGKLPWQSIKSDNEETRMQRVT-----------------EMK------LTMTPEAICEGTPPEFAEFLRYCRGLAF  220 (257)
Q Consensus       164 ~~l~~g~~p~~~~~~~~~~~~~~~~~-----------------~~~------~~~~~~~~~~~~~~~~~~li~~~l~~~p  220 (257)
                      |+|++|..||......+.........                 ...      ...........+++.+.+++.+||..||
T Consensus       204 ~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  283 (345)
T d1pmea_         204 AEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNP  283 (345)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSST
T ss_pred             hHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCCh
Confidence            99999999998743322221111110                 000      0011223445788899999999999999


Q ss_pred             CCCCChHHHHH
Q psy2769         221 SEEPNYGKLRD  231 (257)
Q Consensus       221 ~~Rp~~~~~~~  231 (257)
                      ++|||++++++
T Consensus       284 ~~R~ta~e~L~  294 (345)
T d1pmea_         284 HKRIEVEQALA  294 (345)
T ss_dssp             TTSCCHHHHHT
T ss_pred             hHCcCHHHHhc
Confidence            99999999986

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-43  Score=281.58  Aligned_cols=224  Identities=21%  Similarity=0.181  Sum_probs=166.8

Q ss_pred             ccHHHHHHH--HHhcCCCCCcEEEeeeeeCC----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q psy2769          12 RLFWERNFY--EKLHGAPGVPHVMGYGTSGD----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVH   84 (257)
Q Consensus        12 ~~~~E~~~~--~~l~~~~~i~~~~~~~~~~~----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh   84 (257)
                      ++..|.+++  ..++ ||||+++++++.+.+    .+|+||||+ +|+|.++++.  ..+++..+..++.|++.||+++|
T Consensus        41 ~~~~e~ei~~~~~~~-HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~--~~l~~~~~~~~~~~ia~gl~~lH  117 (303)
T d1vjya_          41 SWFREAEIYQTVMLR-HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR--YTVTVEGMIKLALSTASGLAHLH  117 (303)
T ss_dssp             HHHHHHHHHTSTTCC-CTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH--CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhCC-CCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Confidence            444454444  4566 999999999997643    579999999 9999999984  57999999999999999999999


Q ss_pred             h--------CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCC-CCccCCCCcccccChhHhcCCC------
Q psy2769          85 R--------KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPR-IRTRGLTGTARYASVNAHQWLD------  149 (257)
Q Consensus        85 ~--------~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~------  149 (257)
                      .        .||+||||||+||+++.+   +.+||+|||++.......... .......||+.|+|||++.+..      
T Consensus       118 ~~~~~~~~~~~IvHrDlKp~NILl~~~---~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  194 (303)
T d1vjya_         118 MEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE  194 (303)
T ss_dssp             CCBCSTTCBCEEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHH
T ss_pred             HhhhhhccCCCeeccccCccceEEcCC---CCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCC
Confidence            6        599999999999999766   899999999988765443211 1224567999999999987653      


Q ss_pred             CCCcchHHHHHHHHHHHHhCCCCCCCCCCc------------cHHHHHHHHHHHHhhCChhhh--hcCCcHHHHHHHHHH
Q psy2769         150 QSPRDDLEALCYTLVYFLRGKLPWQSIKSD------------NEETRMQRVTEMKLTMTPEAI--CEGTPPEFAEFLRYC  215 (257)
Q Consensus       150 ~~~~~Dv~slg~~l~~l~~g~~p~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~  215 (257)
                      ++.++||||||+++|||++|..||......            ........+.........+..  ....+..+.+++.+|
T Consensus       195 ~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~c  274 (303)
T d1vjya_         195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC  274 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTT
T ss_pred             cCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHH
Confidence            456899999999999999998876442211            112211111111111111111  112335689999999


Q ss_pred             hcCCCCCCCChHHHHHHHHHHHHhcc
Q psy2769         216 RGLAFSEEPNYGKLRDSFRNLLENKE  241 (257)
Q Consensus       216 l~~~p~~Rp~~~~~~~~l~~~~~~~~  241 (257)
                      |+.||++|||+.++++.|+++..+.+
T Consensus       275 l~~dp~~Rps~~ei~~~L~~i~~~~~  300 (303)
T d1vjya_         275 WYANGAARLTALRIKKTLSQLSQQEG  300 (303)
T ss_dssp             CCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             cccCHhHCcCHHHHHHHHHHHHHhcC
Confidence            99999999999999999999998776

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-42  Score=278.68  Aligned_cols=212  Identities=19%  Similarity=0.244  Sum_probs=174.9

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKK   87 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~   87 (257)
                      ..+.+.+|+.+++++.+||||+++++++.+....+++|||+ +++|.+++.. ...+++..+..++.|++.||.|+|+.|
T Consensus        71 ~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~-~~~~~e~~~~~~~~Qi~~al~~lH~~~  149 (322)
T d1vzoa_          71 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIVLALEHLHKLG  149 (322)
T ss_dssp             SGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHh-cccccHHHHHHHHHHHHHHHHHhhcCC
Confidence            45678999999999996799999999999999999999999 9999999985 556889999999999999999999999


Q ss_pred             ccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC--CCCcchHHHHHHHHHH
Q psy2769          88 IVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD--QSPRDDLEALCYTLVY  165 (257)
Q Consensus        88 i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~Dv~slg~~l~~  165 (257)
                      ++||||||+||+++.+   +.++|+|||++..+.....  .......+++.|++||.+.+..  ++.++||||+||++|+
T Consensus       150 ivHrDiKp~Nill~~~---~~vkL~DFG~a~~~~~~~~--~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLye  224 (322)
T d1vzoa_         150 IIYRDIKLENILLDSN---GHVVLTDFGLSKEFVADET--ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE  224 (322)
T ss_dssp             CCCCCCCGGGEEECTT---SCEEESCSSEEEECCGGGG--GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHH
T ss_pred             EEeccCCccceeecCC---CCEEEeeccchhhhccccc--ccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHH
Confidence            9999999999999876   8999999999876544321  1224567999999999997653  5789999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhhhcCCcHHHHHHHHHHhcCCCCCCCC-----hHHHH
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAICEGTPPEFAEFLRYCRGLAFSEEPN-----YGKLR  230 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~-----~~~~~  230 (257)
                      |++|..||......+....+.....   . .....+..+|+.+.+++.+||.+||++||+     +++++
T Consensus       225 lltG~~PF~~~~~~~~~~~i~~~~~---~-~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil  290 (322)
T d1vzoa_         225 LLTGASPFTVDGEKNSQAEISRRIL---K-SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIK  290 (322)
T ss_dssp             HHHSSCTTSCTTSCCCHHHHHHHHH---H-CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcc---c-CCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHH
Confidence            9999999988665554443333221   1 122233578999999999999999999995     56664

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-41  Score=277.30  Aligned_cols=216  Identities=19%  Similarity=0.161  Sum_probs=168.2

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeee------CCccEEEEeccCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHH
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTS------GDYNILVMELLGPSLEDLFQY---CSKRFSLKTVLMLADQMISRLE   81 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~------~~~~~~v~e~~~~~L~~~~~~---~~~~~~~~~~~~~~~~i~~~l~   81 (257)
                      +...+|+.++++++ ||||+++++++..      ..++++|||||++++.+.+..   ....+++..+..++.|++.||.
T Consensus        58 ~~~~~Ei~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~  136 (350)
T d1q5ka_          58 RFKNRELQIMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA  136 (350)
T ss_dssp             SSCCHHHHHHHHCC-CTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcC-CCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHH
Confidence            44568999999998 9999999999854      235789999996666555543   2567999999999999999999


Q ss_pred             HHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCC-CCCCcchHHHHH
Q psy2769          82 HVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWL-DQSPRDDLEALC  160 (257)
Q Consensus        82 ~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~slg  160 (257)
                      |||++||+||||||+||+++.+  ...+||+|||++........    .....|++.|+|||.+.+. .++.++||||+|
T Consensus       137 yLH~~~IiHrDiKp~NILl~~~--~~~~kl~DFG~a~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG  210 (350)
T d1q5ka_         137 YIHSFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEP----NVSYICSRYYRAPELIFGATDYTSSIDVWSAG  210 (350)
T ss_dssp             HHHTTTEECCCCCGGGEEECTT--TCCEEECCCTTCEECCTTSC----CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             HHHhcCCcccCCCcceEEEecC--CCceeEecccchhhccCCcc----cccccccccccChHHhhcccCCCcceeecccc
Confidence            9999999999999999999855  24799999999887644322    2456799999999998754 679999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC------------------------hhhhhcCCcHHHHHHHHHHh
Q psy2769         161 YTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT------------------------PEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       161 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~li~~~l  216 (257)
                      |++|||++|..||.....   ...+..+........                        .......+++.+.+||.+||
T Consensus       211 ~il~el~~g~~pf~~~~~---~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL  287 (350)
T d1q5ka_         211 CVLAELLLGQPIFPGDSG---VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL  287 (350)
T ss_dssp             HHHHHHHHTSCSSCCSSH---HHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHS
T ss_pred             eEEEehhhCCCCCCCCCH---HHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHc
Confidence            999999999999987433   233333322111000                        00112357889999999999


Q ss_pred             cCCCCCCCChHHHHH--HHHHH
Q psy2769         217 GLAFSEEPNYGKLRD--SFRNL  236 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~--~l~~~  236 (257)
                      ..||++|||+.|+++  .|+++
T Consensus       288 ~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         288 EYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             CSSGGGSCCHHHHHTSGGGGGG
T ss_pred             cCChhHCcCHHHHhcCHhhccc
Confidence            999999999999985  45544

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-40  Score=270.00  Aligned_cols=217  Identities=19%  Similarity=0.187  Sum_probs=168.5

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeee--------CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHH
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTS--------GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISR   79 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~   79 (257)
                      ....++.+|+.++++++ ||||+++++++..        ....|++||++++.+..........+++..+..++.|++.|
T Consensus        51 ~~~~~~~~E~~il~~l~-h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~  129 (318)
T d3blha1          51 GFPITALREIKILQLLK-HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG  129 (318)
T ss_dssp             SSCHHHHHHHHHHHHCC-CTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc-CCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHH
Confidence            34567889999999998 9999999998754        34689999999666666665456789999999999999999


Q ss_pred             HHHHHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCC-CCCccCCCCcccccChhHhcCC-CCCCcchHH
Q psy2769          80 LEHVHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPP-RIRTRGLTGTARYASVNAHQWL-DQSPRDDLE  157 (257)
Q Consensus        80 l~~lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~-~~~~~~~~~~~~~~aPE~~~~~-~~~~~~Dv~  157 (257)
                      |.|||+.||+||||||+||+++.+   +.++++|||++..+...... ........||+.|+|||++.+. .++.++|||
T Consensus       130 l~~lH~~~ivHrDlKp~NILl~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~Diw  206 (318)
T d3blha1         130 LYYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLW  206 (318)
T ss_dssp             HHHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHH
T ss_pred             HHHhccCCEEecCcCchheeecCC---CcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcc
Confidence            999999999999999999999876   89999999999766543211 1122345799999999999765 578999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCChhhh---------------------------hcCCcHHHHH
Q psy2769         158 ALCYTLVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMTPEAI---------------------------CEGTPPEFAE  210 (257)
Q Consensus       158 slg~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~  210 (257)
                      |+||++|+|++|+.||.+..   .......+............                           ....++.+.+
T Consensus       207 SlGvil~el~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  283 (318)
T d3blha1         207 GAGCIMAEMWTRSPIMQGNT---EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD  283 (318)
T ss_dssp             HHHHHHHHHHHSSCSCCCSS---HHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHH
T ss_pred             cCCceeeeHhhCCCCCCCCC---HHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHH
Confidence            99999999999999998743   33333333333222211110                           0123667889


Q ss_pred             HHHHHhcCCCCCCCChHHHHH
Q psy2769         211 FLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       211 li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      ||.+||..||++|||++++++
T Consensus       284 Ll~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         284 LIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHCcCChhHCcCHHHHHc
Confidence            999999999999999999874

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=8.2e-41  Score=271.78  Aligned_cols=213  Identities=17%  Similarity=0.227  Sum_probs=167.5

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee--CCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS--GDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~   85 (257)
                      ..+++.+|+.++..+.+||||+++++++..  ....++||||| +++|..+.    +.+++..+..++.|++.||.|||+
T Consensus        72 ~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~  147 (328)
T d3bqca1          72 KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHS  147 (328)
T ss_dssp             CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhh
Confidence            456789999999999889999999999874  45689999999 88876543    469999999999999999999999


Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHH
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLV  164 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~  164 (257)
                      +||+||||||+||+++.+  .+.++|+|||++........    .....+|+.|+|||.+.+.. ++.++|+||+|++++
T Consensus       148 ~gIvHrDiKp~NILi~~~--~~~vkl~DFG~a~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~  221 (328)
T d3bqca1         148 MGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQE----YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA  221 (328)
T ss_dssp             TTEECCCCSGGGEEEETT--TTEEEECCGGGCEECCTTCC----CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHH
T ss_pred             cccccccccccceEEcCC--CCeeeecccccceeccCCCc----ccccccCccccCcccccCCCCCCcccchhhhhhhhH
Confidence            999999999999999854  25799999999987654322    25567899999999988764 689999999999999


Q ss_pred             HHHhCCCCCCCCCCccH-HHHHHHHHHH--------Hhh---------------------CChhhhhcCCcHHHHHHHHH
Q psy2769         165 YFLRGKLPWQSIKSDNE-ETRMQRVTEM--------KLT---------------------MTPEAICEGTPPEFAEFLRY  214 (257)
Q Consensus       165 ~l~~g~~p~~~~~~~~~-~~~~~~~~~~--------~~~---------------------~~~~~~~~~~~~~~~~li~~  214 (257)
                      ++++|..||........ ...+..+...        ...                     .........+++++.+||++
T Consensus       222 e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~  301 (328)
T d3bqca1         222 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDK  301 (328)
T ss_dssp             HHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHH
T ss_pred             HhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHH
Confidence            99999999987543221 1111111100        000                     00111223478899999999


Q ss_pred             HhcCCCCCCCChHHHHH
Q psy2769         215 CRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       215 ~l~~~p~~Rp~~~~~~~  231 (257)
                      ||..||++|||++++++
T Consensus       302 mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         302 LLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HSCSSGGGSCCHHHHHT
T ss_pred             HccCChhHCcCHHHHhc
Confidence            99999999999999865

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-40  Score=261.54  Aligned_cols=214  Identities=15%  Similarity=0.123  Sum_probs=173.4

Q ss_pred             CcccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q psy2769           8 NPVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRK   86 (257)
Q Consensus         8 ~~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~   86 (257)
                      ...+++.+|+.+++.++ ||||+++++++.+....+++++++ ++++..++. ..+.+++..+..++.|++.||+|||++
T Consensus        43 ~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~q~~~aL~~lH~~  120 (292)
T d1unla_          43 GVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR  120 (292)
T ss_dssp             THHHHHHHHHHHHTTCC-CTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcC-cCCEEeeccccccccceeEEeeeccccccccccc-cccccchhHHHHHHHHHHHHHHHhhcC
Confidence            34568899999999998 999999999999999999999999 777666655 577899999999999999999999999


Q ss_pred             CccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHHHHH
Q psy2769          87 KIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYTLVY  165 (257)
Q Consensus        87 ~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~l~~  165 (257)
                      ||+||||||+||+++.+   +.+||+|||.+..........   ....+++.|+|||.+.+.. ++.++||||+||++|+
T Consensus       121 ~IvHrDiKP~NIli~~~---~~~kl~DFG~a~~~~~~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~e  194 (292)
T d1unla_         121 NVLHRDLKPQNLLINRN---GELKLANFGLARAFGIPVRCY---SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE  194 (292)
T ss_dssp             TEECCCCSGGGEEECTT---CCEEECCCTTCEECCSCCSCC---CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred             CEeeecccCcccccccC---CceeeeecchhhcccCCCccc---eeeccccchhhhhHhccCCCCCchhhccccchHHHH
Confidence            99999999999999876   789999999998765433221   4456788999999998765 5899999999999999


Q ss_pred             HHhCCCCCCCCCCccHHHHHHHHHHHHhhC------------------------ChhhhhcCCcHHHHHHHHHHhcCCCC
Q psy2769         166 FLRGKLPWQSIKSDNEETRMQRVTEMKLTM------------------------TPEAICEGTPPEFAEFLRYCRGLAFS  221 (257)
Q Consensus       166 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~li~~~l~~~p~  221 (257)
                      |++|..||....  +....+..+.......                        ........+++.+.+++++||..||.
T Consensus       195 ll~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~  272 (292)
T d1unla_         195 LANAGRPLFPGN--DVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPV  272 (292)
T ss_dssp             HTTTSCCSCCCS--SHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred             HhhCCCCCCCCC--CHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChh
Confidence            999999976533  3333333333322211                        11122346788999999999999999


Q ss_pred             CCCChHHHHH
Q psy2769         222 EEPNYGKLRD  231 (257)
Q Consensus       222 ~Rp~~~~~~~  231 (257)
                      +|||++++++
T Consensus       273 ~R~sa~e~L~  282 (292)
T d1unla_         273 QRISAEEALQ  282 (292)
T ss_dssp             GSCCHHHHTT
T ss_pred             HCcCHHHHhc
Confidence            9999998864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-40  Score=268.69  Aligned_cols=209  Identities=18%  Similarity=0.178  Sum_probs=158.7

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeee------CCccEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTS------GDYNILVMELLGPSLEDLFQYCSKRFSLKTVLMLADQMISRLEH   82 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~   82 (257)
                      ..+++.+|+.++++++ ||||++++++|..      ..+.|+||||+++++.+.+.   ..+++..+..++.|++.||.|
T Consensus        59 ~~~~~~~Ei~il~~l~-hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~---~~~~~~~i~~~~~qil~gl~~  134 (355)
T d2b1pa1          59 HAKRAYRELVLMKCVN-HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKH  134 (355)
T ss_dssp             HHHHHHHHHHHHHHCC-CTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT---SCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-CCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhh---cCCCHHHHHHHHHHHHHHHHH
Confidence            3457889999999997 9999999999863      35789999999666666554   579999999999999999999


Q ss_pred             HHhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCCCCcchHHHHHHH
Q psy2769          83 VHRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQSPRDDLEALCYT  162 (257)
Q Consensus        83 lh~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slg~~  162 (257)
                      ||+.||+||||||+||+++.+   +.++++|||.+.......    ......+|+.|+|||++.+..++.++||||+||+
T Consensus       135 LH~~giiHrDlKP~Nil~~~~---~~~kl~df~~~~~~~~~~----~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~  207 (355)
T d2b1pa1         135 LHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI  207 (355)
T ss_dssp             HHHTTCCCSCCCGGGEEECTT---CCEEECCCCC-------------------CCTTCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             hhhcccccccCCccccccccc---cceeeechhhhhcccccc----ccccccccccccChhhhcCCCCCCCcccccccch
Confidence            999999999999999999876   889999999877554332    2245578999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhCC-------------------------------------hhhhhcCCc
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTMT-------------------------------------PEAICEGTP  205 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~  205 (257)
                      +++|++|+.||.+....   .....+........                                     ........+
T Consensus       208 l~ell~g~~pF~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  284 (355)
T d2b1pa1         208 MGEMVRHKILFPGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA  284 (355)
T ss_dssp             HHHHHHSSCSSCCSSHH---HHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHH
T ss_pred             HHHHhhCCCCCCCCCHH---HHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCC
Confidence            99999999999874322   22222221111000                                     000112246


Q ss_pred             HHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         206 PEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       206 ~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                      +.+.+||++||..||++|||++++++
T Consensus       285 ~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         285 SQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            67899999999999999999999975

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=267.14  Aligned_cols=207  Identities=17%  Similarity=0.250  Sum_probs=162.4

Q ss_pred             ccccHHHHHHHHHhcCCCCCcEEEeeeeeCC-----ccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLHGAPGVPHVMGYGTSGD-----YNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHV   83 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~-----~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l   83 (257)
                      .+++.+|+.++++++ ||||+++++++....     ..+++++++ +++|.+++.  .+.+++..+..++.|++.||.||
T Consensus        61 ~~~~~~Ei~il~~l~-h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~--~~~l~e~~~~~i~~qil~aL~~L  137 (348)
T d2gfsa1          61 AKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYI  137 (348)
T ss_dssp             HHHHHHHHHHHHHCC-CTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT--TCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcC-CCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcc--cccccHHHHHHHHHHHHHHHHHH
Confidence            346889999999998 999999999886432     234445555 999999987  56799999999999999999999


Q ss_pred             HhCCccccCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCC-CCCcchHHHHHHH
Q psy2769          84 HRKKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLD-QSPRDDLEALCYT  162 (257)
Q Consensus        84 h~~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~-~~~~~Dv~slg~~  162 (257)
                      |++||+||||||+||+++.+   +.++++|||.+......      .....|++.|+|||...+.. ++.++||||+||+
T Consensus       138 H~~giiHrDiKp~NILi~~~---~~~kl~dfg~a~~~~~~------~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~  208 (348)
T d2gfsa1         138 HSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI  208 (348)
T ss_dssp             HHTTCCCCCCCGGGEEECTT---CCEEECCC----CCTGG------GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHH
T ss_pred             HhCCCcccccCCcccccccc---ccccccccchhcccCcc------cccccccccccCchhhcCCccCCcccchhhhhHH
Confidence            99999999999999999876   89999999998654322      25567999999999987764 5889999999999


Q ss_pred             HHHHHhCCCCCCCCCCccHHHHHHHHHHHHhhC--------------------------ChhhhhcCCcHHHHHHHHHHh
Q psy2769         163 LVYFLRGKLPWQSIKSDNEETRMQRVTEMKLTM--------------------------TPEAICEGTPPEFAEFLRYCR  216 (257)
Q Consensus       163 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~li~~~l  216 (257)
                      +|+|++|..||.+.+...   ....+.......                          ........+++.+.+||++||
T Consensus       209 l~~ll~g~~pF~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL  285 (348)
T d2gfsa1         209 MAELLTGRTLFPGTDHID---QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  285 (348)
T ss_dssp             HHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHS
T ss_pred             HHHHHhCCCCCCCCCHHH---HHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHC
Confidence            999999999998743322   222222221111                          111223468899999999999


Q ss_pred             cCCCCCCCChHHHHH
Q psy2769         217 GLAFSEEPNYGKLRD  231 (257)
Q Consensus       217 ~~~p~~Rp~~~~~~~  231 (257)
                      ..||++|||++++++
T Consensus       286 ~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         286 VLDSDKRITAAQALA  300 (348)
T ss_dssp             CSSGGGSCCHHHHHT
T ss_pred             cCChhhCcCHHHHhc
Confidence            999999999999986

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-34  Score=236.21  Aligned_cols=216  Identities=18%  Similarity=0.233  Sum_probs=156.0

Q ss_pred             ccccHHHHHHHHHhc----------CCCCCcEEEeeeeeC--CccEEEEecc--CCCHHHHHHHh-cCCCCHHHHHHHHH
Q psy2769          10 VQRLFWERNFYEKLH----------GAPGVPHVMGYGTSG--DYNILVMELL--GPSLEDLFQYC-SKRFSLKTVLMLAD   74 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~----------~~~~i~~~~~~~~~~--~~~~~v~e~~--~~~L~~~~~~~-~~~~~~~~~~~~~~   74 (257)
                      .+.+.+|+.+++.+.          +|+||+++++++...  ...++++.++  +++........ ...+++..+..++.
T Consensus        53 ~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~  132 (362)
T d1q8ya_          53 TEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK  132 (362)
T ss_dssp             HHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHH
Confidence            456788999999886          358899999888653  3455555555  44444444432 56799999999999


Q ss_pred             HHHHHHHHHHh-CCccccCCCCCceEeeccCCC---CeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhHhcCCCC
Q psy2769          75 QMISRLEHVHR-KKIVHRDIKPDNFLMGVRENF---NTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNAHQWLDQ  150 (257)
Q Consensus        75 ~i~~~l~~lh~-~~i~H~dl~~~nili~~~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  150 (257)
                      |++.||.+||+ .||+||||||+||+++.++..   ..++++|||.+.......      ....+++.|+|||++.+..+
T Consensus       133 qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~------~~~~gt~~y~aPE~~~~~~~  206 (362)
T d1q8ya_         133 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY------TNSIQTREYRSPEVLLGAPW  206 (362)
T ss_dssp             HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC------CSCCSCGGGCCHHHHHTCCC
T ss_pred             HHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccccc------ccccccccccChhhccccCC
Confidence            99999999997 899999999999999875221   258999999987654322      45679999999999999999


Q ss_pred             CCcchHHHHHHHHHHHHhCCCCCCCCCCcc---HHHHHHHHHHHHhhCCh------------------------------
Q psy2769         151 SPRDDLEALCYTLVYFLRGKLPWQSIKSDN---EETRMQRVTEMKLTMTP------------------------------  197 (257)
Q Consensus       151 ~~~~Dv~slg~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~------------------------------  197 (257)
                      +.++|+||+|+++++|++|..||.......   ....+..........+.                              
T Consensus       207 ~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (362)
T d1q8ya_         207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPL  286 (362)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCH
T ss_pred             CccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCch
Confidence            999999999999999999999997643221   11111111111000000                              


Q ss_pred             -------hhhhcCCcHHHHHHHHHHhcCCCCCCCChHHHHH
Q psy2769         198 -------EAICEGTPPEFAEFLRYCRGLAFSEEPNYGKLRD  231 (257)
Q Consensus       198 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~~~  231 (257)
                             .......++.+.+||.+||..||.+|||++++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         287 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             hhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                   0001234577999999999999999999999876

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.67  E-value=1.8e-17  Score=122.94  Aligned_cols=124  Identities=19%  Similarity=0.252  Sum_probs=88.9

Q ss_pred             ccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q psy2769          12 RLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHRKKIVH   90 (257)
Q Consensus        12 ~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~H   90 (257)
                      ...+|...+.++. +++++..+++..    .+++||++ +..+        ..++...+..++.|++.++.+||+.|++|
T Consensus        60 ~~~~e~~~l~~l~-~~~v~~~~~~~~----~~lvme~~~~~~~--------~~l~~~~~~~i~~ql~~~l~~lH~~giiH  126 (191)
T d1zara2          60 SARNEFRALQKLQ-GLAVPKVYAWEG----NAVLMELIDAKEL--------YRVRVENPDEVLDMILEEVAKFYHRGIVH  126 (191)
T ss_dssp             HHHHHHHHHHHTT-TSSSCCEEEEET----TEEEEECCCCEEG--------GGCCCSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHcc-CCCcceEEEecC----CEEEEEeeccccc--------cchhhHHHHHHHHHHHHHHHHHhhCCEEE
Confidence            3456888899998 888998887542    47999999 5432        22455667789999999999999999999


Q ss_pred             cCCCCCceEeeccCCCCeEEEEeCCcceecCCCCCCCCCccCCCCcccccChhH-----hcCCCCCCcchHHHHHHHH
Q psy2769          91 RDIKPDNFLMGVRENFNTVYLVDFGLAVDFCPNCPPRIRTRGLTGTARYASVNA-----HQWLDQSPRDDLEALCYTL  163 (257)
Q Consensus        91 ~dl~~~nili~~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~aPE~-----~~~~~~~~~~Dv~slg~~l  163 (257)
                      |||||+||+++.+    .++++|||.+.......           ...|....+     .-...++.++|+||+.--+
T Consensus       127 rDiKP~NILv~~~----~~~liDFG~a~~~~~~~-----------~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         127 GDLSQYNVLVSEE----GIWIIDFPQSVEVGEEG-----------WREILERDVRNIITYFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             SCCSTTSEEEETT----EEEECCCTTCEETTSTT-----------HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             ccCChhheeeeCC----CEEEEECCCcccCCCCC-----------cHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence            9999999999743    58999999987643211           111221110     1123567889999976443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.13  E-value=3.6e-06  Score=63.89  Aligned_cols=101  Identities=16%  Similarity=0.203  Sum_probs=70.0

Q ss_pred             cccccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--
Q psy2769           9 PVQRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GPSLEDLFQYCSKRFSLKTVLMLADQMISRLEHVHR--   85 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--   85 (257)
                      ....+.+|..++..+.++-.+++++.++..++..++||++. |.++.+....   ...   ...++.++...++.||+  
T Consensus        52 ~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~~~---~~~---~~~~~~~l~~~l~~lH~~~  125 (263)
T d1j7la_          52 TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYED---EQS---PEKIIELYAECIRLFHSID  125 (263)
T ss_dssp             STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHTTT---CSC---HHHHHHHHHHHHHHHHTSC
T ss_pred             chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccccc---ccc---HHHHHHHHHHHHHHHhccC
Confidence            34568899999999986656899999998888999999999 7776543321   111   11223333333444442  


Q ss_pred             ---------------------------------------------------------CCccccCCCCCceEeeccCCCCe
Q psy2769          86 ---------------------------------------------------------KKIVHRDIKPDNFLMGVRENFNT  108 (257)
Q Consensus        86 ---------------------------------------------------------~~i~H~dl~~~nili~~~~~~~~  108 (257)
                                                                               ..++|+|+.|.||+++.+   +.
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~---~~  202 (263)
T d1j7la_         126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDG---KV  202 (263)
T ss_dssp             CTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETT---EE
T ss_pred             ccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCC---ce
Confidence                                                                     126899999999999754   55


Q ss_pred             EEEEeCCcce
Q psy2769         109 VYLVDFGLAV  118 (257)
Q Consensus       109 ~~l~df~~~~  118 (257)
                      +.++||+.+.
T Consensus       203 ~~lIDwe~a~  212 (263)
T d1j7la_         203 SGFIDLGRSG  212 (263)
T ss_dssp             EEECCCTTCE
T ss_pred             EEEeechhcc
Confidence            6799999875

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.75  E-value=1.3e-05  Score=60.47  Aligned_cols=44  Identities=18%  Similarity=0.109  Sum_probs=35.3

Q ss_pred             ccccHHHHHHHHHhcCCCC-CcEEEeeeeeCCccEEEEecc-CCCH
Q psy2769          10 VQRLFWERNFYEKLHGAPG-VPHVMGYGTSGDYNILVMELL-GPSL   53 (257)
Q Consensus        10 ~~~~~~E~~~~~~l~~~~~-i~~~~~~~~~~~~~~~v~e~~-~~~L   53 (257)
                      ...+..|...+..|.++.- +++++.+..+.+..+++|+++ |.++
T Consensus        48 ~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          48 LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            4568899999999885533 788898888888899999999 6554

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=96.67  E-value=0.0026  Score=50.74  Aligned_cols=42  Identities=21%  Similarity=0.128  Sum_probs=29.6

Q ss_pred             cccccHHHHHHHHHhcCC--CCCcEEEeeeeeCCccEEEEecc-CCC
Q psy2769           9 PVQRLFWERNFYEKLHGA--PGVPHVMGYGTSGDYNILVMELL-GPS   52 (257)
Q Consensus         9 ~~~~~~~E~~~~~~l~~~--~~i~~~~~~~~~~~~~~~v~e~~-~~~   52 (257)
                      ...+...|.+.+..+..+  ..+|+++.+.  ....++|||++ +.+
T Consensus        73 ~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~lvmE~L~~~~  117 (392)
T d2pula1          73 TIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVTVMEDLSHLK  117 (392)
T ss_dssp             CTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEEEECCCTTSE
T ss_pred             CHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEEEEeccCCcc
Confidence            345667899999888644  3578887764  34568999999 543

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.07  E-value=0.0038  Score=49.72  Aligned_cols=37  Identities=16%  Similarity=0.105  Sum_probs=29.3

Q ss_pred             cccHHHHHHHHHhcCCCCCcEEEeeeeeCCccEEEEecc-CC
Q psy2769          11 QRLFWERNFYEKLHGAPGVPHVMGYGTSGDYNILVMELL-GP   51 (257)
Q Consensus        11 ~~~~~E~~~~~~l~~~~~i~~~~~~~~~~~~~~~v~e~~-~~   51 (257)
                      ....+|..+++.+..+.-.+++++++..    .+|++|+ |.
T Consensus        89 idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi~g~  126 (395)
T d1nw1a_          89 SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSR  126 (395)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEE
T ss_pred             hHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEeccc
Confidence            3466899999999877778899998853    5789988 53

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.67  E-value=0.0055  Score=47.01  Aligned_cols=30  Identities=27%  Similarity=0.358  Sum_probs=25.7

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCcce
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAV  118 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~  118 (257)
                      .|++|+|+.++|++++.+   ...-++||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~---~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGD---ELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETT---EEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccc---cceeEecccccc
Confidence            479999999999999865   566899999874

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=87.67  E-value=0.098  Score=39.99  Aligned_cols=29  Identities=24%  Similarity=0.212  Sum_probs=22.8

Q ss_pred             CCccccCCCCCceEeeccCCCCeEEEEeCCccee
Q psy2769          86 KKIVHRDIKPDNFLMGVRENFNTVYLVDFGLAVD  119 (257)
Q Consensus        86 ~~i~H~dl~~~nili~~~~~~~~~~l~df~~~~~  119 (257)
                      .+++|+|+.+.||+++.    + ..++||+-+..
T Consensus       192 ~~liHgDlh~~NvL~~~----~-~~~IDFdd~~~  220 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRD----G-PMFVDLDDARN  220 (325)
T ss_dssp             CEECCSSCSGGGEEESS----S-EEECCCTTCCE
T ss_pred             ceeecCCCCcccEEEeC----C-ceEEechhccc
Confidence            46899999999999853    2 35789997753