BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2772
(746 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose
And 5-
Chloro-N-[4-(1,
2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide
pdb|2ZB2|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcose
And 5-
Chloro-N-[4-(1,
2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide
Length = 849
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 49/59 (83%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
L+ N GDYIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 257 LRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 315
>pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Chloroindoloyl Glycine Amide
pdb|1XOI|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Chloroindoloyl Glycine Amide
Length = 846
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 49/59 (83%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
L+ N GDYIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-526, 423
pdb|1EM6|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-526, 423
pdb|1EXV|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-403, 700
pdb|1EXV|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With Glcnac
And Cp-403, 700
pdb|1L5Q|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403700
pdb|1L5Q|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403700
pdb|1L5R|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With
Riboflavin, N- Acetyl-Beta-D-Glucopyranosylamine And
Cp-403,700
pdb|1L5R|B Chain B, Human Liver Glycogen Phosphorylase A Complexed With
Riboflavin, N- Acetyl-Beta-D-Glucopyranosylamine And
Cp-403,700
pdb|1L5S|A Chain A, Human Liver Glycogen Phosphorylase Complexed With Uric
Acid, N-Acetyl- Beta-D-Glucopyranosylamine, And
Cp-403,700
pdb|1L5S|B Chain B, Human Liver Glycogen Phosphorylase Complexed With Uric
Acid, N-Acetyl- Beta-D-Glucopyranosylamine, And
Cp-403,700
pdb|1L7X|A Chain A, Human Liver Glycogen Phosphorylase B Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403,700
pdb|1L7X|B Chain B, Human Liver Glycogen Phosphorylase B Complexed With
Caffeine, N- Acetyl-Beta-D-Glucopyranosylamine, And
Cp-403,700
Length = 847
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 49/59 (83%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
L+ N GDYIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 255 LRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 313
>pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With
N-Acetyl-Beta-D- Glucopyranosylamine
pdb|1FC0|B Chain B, Human Liver Glycogen Phosphorylase Complexed With
N-Acetyl-Beta-D- Glucopyranosylamine
pdb|2ATI|A Chain A, Glycogen Phosphorylase Inhibitors
pdb|2ATI|B Chain B, Glycogen Phosphorylase Inhibitors
Length = 846
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 49/59 (83%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
L+ N GDYIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp
Length = 846
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 49/59 (83%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
L+ N GDYIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk261
pdb|3DDS|B Chain B, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk261
pdb|3DDW|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk055
pdb|3DDW|B Chain B, Crystal Structure Of Glycogen Phosphorylase Complexed With
An Anthranilimide Based Inhibitor Gsk055
pdb|3DD1|A Chain A, Crystal Structure Of Glycogen Phophorylase Complexed With
An Anthranilimide Based Inhibitor Gsk254
pdb|3DD1|B Chain B, Crystal Structure Of Glycogen Phophorylase Complexed With
An Anthranilimide Based Inhibitor Gsk254
Length = 848
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 49/59 (83%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
L+ N GDYIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 256 LRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 314
>pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex
Length = 847
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 49/59 (83%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
L+ N GDYIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 255 LRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 313
>pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In
Complex With The Allosteric Inhibitor Ave5688
pdb|3CEH|B Chain B, Human Liver Glycogen Phosphorylase (Tense State) In
Complex With The Allosteric Inhibitor Ave5688
pdb|3CEJ|A Chain A, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave2865
pdb|3CEJ|B Chain B, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave2865
pdb|3CEM|A Chain A, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave9423
pdb|3CEM|B Chain B, Human Glycogen Phosphorylase (Tense State) In Complex With
The Allosteric Inhibitor Ave9423
Length = 809
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 49/59 (83%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
L+ N GDYIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 232 LRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 290
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex
pdb|1Z6Q|A Chain A, Glycogen Phosphorylase With Inhibitor In The Amp Site
pdb|1A8I|A Chain A, Spirohydantoin Inhibitor Of Glycogen Phosphorylase
pdb|2GPN|A Chain A, 100 K Structure Of Glycogen Phosphorylase At 2.0 Angstroms
Resolution
pdb|3E3O|A Chain A, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|B Chain B, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|C Chain C, Glycogen Phosphorylase R State-Imp Complex
pdb|3E3O|D Chain D, Glycogen Phosphorylase R State-Imp Complex
Length = 842
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A
With Amp And Glucose
Length = 842
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 255 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 313
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With Glucose At 100 K
pdb|2PYI|A Chain A, Crystal Structure Of Glycogen Phosphorylase In Complex
With Glucosyl Triazoleacetamide
pdb|3L79|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk1 Complex
pdb|3L7A|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk2 Complex
pdb|3L7B|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk3 Complex
pdb|3L7C|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk4 Complex
pdb|3L7D|A Chain A, Crystal Structure Of Glycogen Phosphorylase Dk5 Complex
Length = 843
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 255 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 313
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab
Complex
pdb|2G9R|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With (3r,
4r,5r)-5-Hydroxymethyl-1-(3-Phenylpropyl)-Piperidine-3,
4-Diol
pdb|2G9U|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With (3r,
4r,5r)-5-Hydroxymethyl-1-(3-Phenylpropyl)-Piperidine-3,
4-Diol And Phosphate
pdb|2G9V|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex
With (3r, 4r,5r)-5-Hydroxymethylpiperidine-3,4-Diol And
Phosphate
pdb|2OFF|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With A Potent Allosteric Inhibitor
pdb|2QN1|A Chain A, Glycogen Phosphorylase B In Complex With Asiatic Acid
pdb|2QN2|A Chain A, Glycogen Phosphorylase B In Complex With Maslinic Acid
pdb|2QLM|A Chain A, Glycogen Phosphorylase In Complex With Fn67
pdb|2QLN|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-Phenylbenzoyl- N'-Beta-D-Glucopyranosyl Urea
pdb|2QN3|A Chain A, Glycogen Phosphorylase In Complex With
N-4-Chlorobenzoyl-N- Beta-D-Glucopyranosyl Urea
pdb|2QNB|A Chain A, Glycogen Phosphorylase B In Complex With
N-Benzoyl-N'-Beta- D-Glucopyranosyl Urea
pdb|2QRM|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Nitrophenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,
5'-Isoxazoline]
pdb|2QRP|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(2-
Naphthyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-Isoxazoline]
pdb|2QRQ|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Methylphenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-
Isoxazoline]
pdb|2QRG|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-(4-
Methoxyphenyl)-Spiro[1,5-Anhydro-D-Glucitol-1,5'-
Isoxazoline]
pdb|2QRH|A Chain A, Glycogen Phosphorylase B In Complex With (1r)-3'-
Phenylspiro[1,5-Anhydro-D-Glucitol-1,5'-Isoxazoline]
pdb|3BCR|A Chain A, Glycogen Phosphorylase B In Complex With Azt
pdb|3BCS|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Uracil
pdb|3BCU|A Chain A, Glucogen Phosphorylase Complex With Thymidine
pdb|3BD6|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Ribofuranosyl)
Cyanuric Acid
pdb|3E3L|A Chain A, The R-state Glycogen Phosphorylase
pdb|3E3L|B Chain B, The R-state Glycogen Phosphorylase
pdb|3E3L|C Chain C, The R-state Glycogen Phosphorylase
pdb|3E3L|D Chain D, The R-state Glycogen Phosphorylase
pdb|3CUT|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamide
pdb|3CUU|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamides
pdb|3CUV|A Chain A, Tracking Structure Activity Relationships Of Glycogen
Phosphorylase Inhibitors: Synthesis, Kinetic And
Crystallographic Evaluation Of Analogues Of N-(-D-
Glucopyranosyl)-N'-Oxamides
pdb|3CUW|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With N-(-D-Glucopyranosyl)-N'-(2-Naphthyl)oxamides
pdb|3E3N|A Chain A, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|B Chain B, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|C Chain C, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|D Chain D, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|E Chain E, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|F Chain F, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|G Chain G, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3E3N|H Chain H, The Glycogen Phosphorylase B R State- Amp Complex
pdb|3EBO|A Chain A, Glycogen Phosphorylase B/chrysin Complex
pdb|3EBP|A Chain A, Glycogen Phosphorylase B/flavopiridol Complex
pdb|3G2H|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2I|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazole
pdb|3G2J|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2K|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazole
pdb|3G2L|A Chain A, Crystal Structure Of 1-(Beta-D-Glucopyranosyl)-4-
Substituted-1,2,3-Triazoles In Complex With Glycogen
Phosphorylase
pdb|3G2N|A Chain A, Crystal Structure Of N-Acylglucosylamine With Glycogen
Phosphorylase
pdb|3MQF|A Chain A, Glycogen Phosphorylase Complexed With
4-Fluorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MRT|A Chain A, Glycogen Phosphorylase Complexed With
4-Pyridinecarboxaldehyde-4- (Beta-D-Glucopyranosyl)
Thiosemicarbazone
pdb|3MRV|A Chain A, Glycogen Phosphorylase Complexed With
3-Hydroxybenzaldehyde-4-(Beta-D- Glucopyranosyl)
Thiosemicarbazone
pdb|3MRX|A Chain A, Glycogen Phosphorylase Complexed With
4-Methoxybenzaldehyde-4-(2,3,4,
6-Tetra-O-Acetyl-Beta-D-Glucopyranosyl)-
Thiosemicarbazone
pdb|3MS2|A Chain A, Glycogen Phosphorylase Complexed With
4-Methylbenzaldehyde-4-(Beta-D- Glucopyranosyl)
Thiosemicarbazone
pdb|3MS4|A Chain A, Glycogen Phosphorylase Complexed With
4-Trifluoromethylbenzaldehyde-4-
(Beta-D-Glucopyranosyl)-Thiosemicarbazone
pdb|3MS7|A Chain A, Glycogen Phosphorylase Complexed With
2-Chlorobenzaldehyde-4-(2,3,4,6-
Tetra-O-Acetyl-Beta-D-Glucopyranosyl) Thiosemicarbazone
pdb|3MT7|A Chain A, Glycogen Phosphorylase Complexed With
4-Bromobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MT8|A Chain A, Glycogen Phosphorylase Complexed With
4-Chlorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MT9|A Chain A, Glycogen Phosphorylase Complexed With
4-Nitrobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTA|A Chain A, Glycogen Phosphorylase Complexed With
3-Bromobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTB|A Chain A, Glycogen Phosphorylase Complexed With
3-Chlorobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MTD|A Chain A, Glycogen Phosphorylase Complexed With
4-Hydroxybenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3MSC|A Chain A, Glycogen Phosphorylase Complexed With
2-Nitrobenzaldehyde-4-(Beta-D-
Glucopyranosyl)-Thiosemicarbazone
pdb|3NP7|A Chain A, Glycogen Phosphorylase Complexed With
2,5-Dihydroxy-3-(Beta-D- Glucopyranosyl)-Chlorobenzene
And 2,5-Dihydroxy-4-(Beta-D-
Glucopyranosyl)-Chlorobenzene
pdb|3NP9|A Chain A, Glycogen Phosphorylase Complexed With
3-(Beta-D-Glucopyranosyl)-2-
Hydroxy-5-Methoxy-Chlorobenzene
pdb|3NPA|A Chain A, Glycogen Phosphorylase Complexed With
2,5-Dihydroxy-4-(Beta-D- Glucopyranosyl)-Bromo-Benzene
pdb|3S0J|A Chain A, The Crystal Structure Of Glycogen Phosphorylase B In
Complex With 2,5-
Dihydroxy-4-(Beta-D-Glucopyranosyl)-Chlorobenzene
pdb|3SYM|A Chain A, Glycogen Phosphorylase B In Complex With 3
-C-(Hydroxymethyl)-Beta-D- Glucopyranonucleoside Of
5-Fluorouracil
pdb|3SYR|A Chain A, Glycogen Phosphorylase B In Complex With
Beta-D-Glucopyranonucleoside 5-Fluorouracil
pdb|3T3D|A Chain A, Glycogen Phosphorylase B In Complex With Glcu
pdb|3T3E|A Chain A, Glycogen Phosphorylase B In Complex With Glcclu
pdb|3T3G|A Chain A, Glycogen Phosphorylase B In Complex With Glcbru
pdb|3T3H|A Chain A, Glycogen Phosphorylase B In Complex With Glciu
pdb|3T3I|A Chain A, Glycogen Phosphorylase B In Complex With Glccf3u
Length = 842
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|B Chain B, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|C Chain C, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|7GPB|D Chain D, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|9GPB|A Chain A, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|B Chain B, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|C Chain C, The Allosteric Transition Of Glycogen Phosphorylase
pdb|9GPB|D Chain D, The Allosteric Transition Of Glycogen Phosphorylase
pdb|1B4D|A Chain A, Amidocarbamate Inhibitor Of Glycogen Phosphorylase
pdb|1BX3|A Chain A, Effects Of Commonly Used Cryoprotectants On Glycogen
Phosphorylase Activity And Structure
pdb|2PRI|A Chain A, Binding Of 2-Deoxy-Glucose-6-Phosphate To Glycogen
Phosphorylase B
pdb|2PRJ|A Chain A, Binding Of N-Acetyl-Beta-D-Glucopyranosylamine To Glycogen
Phosphorylase B
pdb|2SKC|A Chain A, Pyridoxal Phosphorylase B In Complex With Fluorophosphate,
Glucose And Inosine-5'-Monophosphate
pdb|2SKD|A Chain A, Pyridoxal Phosphorylase B In Complex With Phosphate,
Glucose And Inosine-5'-Monophosphate
pdb|2SKE|A Chain A, Pyridoxal Phosphorylase B In Complex With Phosphite,
Glucose And Inosine-5'-monophosphate
pdb|1C8K|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1GFZ|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1GG8|A Chain A, Design Of Inhibitors Of Glycogen Phosphorylase: A Study Of
Alpha-And Beta-C-Glucosides And 1-Thio-Beta-D-Glucose
Compounds
pdb|1FS4|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTQ|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTW|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FTY|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU4|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU7|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1FU8|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1GGN|A Chain A, Structures Of Glycogen Phosphorylase-Inhibitor Complexes
And The Implications For Structure-Based Drug Design
pdb|1HLF|A Chain A, Binding Of Glucopyranosylidene-Spiro-Thiohydantoin To
Glycogen Phosphorylase B: Kinetic And Crystallographic
Stud
pdb|1H5U|A Chain A, The 1.76 A Resolution Crystal Structure Of Glycogen
Phosphorylase B Complexed With Glucose And Cp320626, A
Potential Antidiabetic Drug
pdb|1K06|A Chain A, Crystallographic Binding Study Of 100 Mm
N-Benzoyl-N'-Beta-D- Glucopyranosyl Urea To Glycogen
Phosphorylase B
pdb|1K08|A Chain A, Crystallographic Binding Study Of 10 Mm
N-Benzoyl-N'-Beta-D- Glucopyranosyl Urea To Glycogen
Phosphorylase B
pdb|1KTI|A Chain A, Binding Of 100 Mm N-Acetyl-N'-Beta-D-Glucopyranosyl Urea
To Glycogen Phosphorylase B: Kinetic And
Crystallographic Studies
pdb|1P29|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Maltopentaose
pdb|1P2B|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Maltoheptaose
pdb|1P2D|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Beta Cyclodextrin
pdb|1P2G|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With Gamma Cyclodextrin
pdb|1P4G|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Azido-Alpha-D-Glucopyranosyl)formamide
pdb|1P4H|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Acetamido-alpha-d-glucopyranosyl) Formamide
pdb|1P4J|A Chain A, Crystal Structure Of Glycogen Phosphorylase B In Complex
With C-(1- Hydroxy-Beta-D-Glucopyranosyl)formamide
pdb|1WUT|A Chain A, Acyl Ureas As Human Liver Glycogen Phosphorylase
Inhibitors For The Treatment Of Type 2 Diabetes
pdb|1WUY|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogen Phosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WV0|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogen Phosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WV1|A Chain A, Crystallographic Studies On Acyl Ureas, A New Class Of
Inhibitors Of Glycogenphosphorylase. Broad Specificity
Of The Allosteric Site
pdb|1WW2|A Chain A, Crystallographic Studies On Two Bioisosteric Analogues,
N-Acetyl-Beta- D-Glucopyranosylamine And
N-Trifluoroacetyl-Beta-D- Glucopyranosylamine, Potent
Inhibitors Of Muscle Glycogen Phosphorylase
pdb|1WW3|A Chain A, Crystallographic Studies On Two Bioisosteric Analogues,
N-Acetyl-Beta- D-Glucopyranosylamine And
N-Trifluoroacetyl-Beta-D- Glucopyranosylamine, Potent
Inhibitors Of Muscle Glycogen Phosphorylase
pdb|2IEG|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEG|B Chain B, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEI|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|2IEI|B Chain B, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
In Complex With 3,4-Dihydro-2-Quinolone
pdb|1GPB|A Chain A, Glycogen Phosphorylase B: Description Of The Protein
Structure
pdb|2GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|3GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|4GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|5GPB|A Chain A, Comparison Of The Binding Of Glucose And
Glucose-1-Phosphate Derivatives To T-State Glycogen
Phosphorylase B
pdb|6GPB|A Chain A, Refined Crystal Structure Of The Phosphorylase-Heptulose
2-Phosphate- Oligosaccharide-Amp Complex
pdb|8GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|2QN7|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-Hydroxybenzoyl-N'-4-Beta- D-Glucopyranosyl Urea
pdb|2QN8|A Chain A, Glycogen Phosphorylase B In Complex With
N-4-nitrobenzoyl-n'-beta-d- Glucopyranosyl Urea
pdb|2QN9|A Chain A, Glycogen Phosphorylase In Complex With
N-4-Aminobenzoyl-N'-Beta-D- Glucopyranosyl Urea
Length = 842
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|B Chain B, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|C Chain C, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOI|D Chain D, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
And R States
pdb|1NOJ|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
State
pdb|1NOK|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State
Analogue Nojirimycin Tetrazole And Phosphate In The T
State
Length = 842
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone
Derivatives To Glycogen Phosphorylase: A New Class Of
Inhibitors
Length = 841
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 253 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 311
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|B Chain B, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|C Chain C, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
pdb|1GPA|D Chain D, Structural Mechanism For Glycogen Phosphorylase Control By
Phosphorylation And Amp
Length = 842
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|B Chain B, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|C Chain C, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|1PYG|D Chain D, Structural Basis For The Activation Of Glycogen
Phosphorylase B By Adenosine Monophosphate
pdb|2AMV|A Chain A, The Structure Of Glycogen Phosphorylase B With An Alkyl-
Dihydropyridine-Dicarboxylic Acid
pdb|1E1Y|A Chain A, Flavopiridol Inhibits Glycogen Phosphorylase By Binding At
The Inhibitor Site
pdb|1UZU|A Chain A, Glycogen Phosphorylase B In Complex With Indirubin-5'-
Sulphonate
pdb|1XC7|A Chain A, Binding Of Beta-D-Glucopyranosyl Bismethoxyphosphoramidate
To Glycogen Phosphorylase B: Kinetic And
Crystallographic Studies
pdb|1XKX|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1XL0|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1XL1|A Chain A, Kinetic And Crystallographic Studies On
2-(Beta-D-Glucopyranosyl)-5-
Methyl-1,3,4-Oxadiazole,-Benzothiazole,
And-Benzimidazole, Inhibitors Of Muscle Glycogen
Phosphorylase B. Evidence For A New Binding Site.
pdb|1Z62|A Chain A, Indirubin-3'-aminooxy-acetate Inhibits Glycogen
Phosphorylase By Binding At The Inhibitor And The
Allosteric Site. Broad Specificities Of The Two Sites
pdb|2F3P|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
N-(Beta-D- Glucopyranosyl)oxamic Acid Complex
pdb|2F3Q|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
METHYL-N-(Beta-D- Glucopyranosyl)oxamate Complex
pdb|2F3S|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
ETHYL-N- (Beta-D-Glucopyranosyl)oxamate Complex
pdb|2F3U|A Chain A, Crystal Structure Of The Glycogen Phosphorylase B
N-(Beta-D- Glucopyranosyl)-N'-Cyclopropyl Oxalamide
Complex
pdb|2FET|A Chain A, Synthesis Of C-D-Glycopyranosyl-Hydroquinones
And-Benzoquinones. Inhibition Of Ptp1b. Inhibition Of
And Binding To Glycogen Phosphorylase In The Crystal
pdb|2FF5|A Chain A, Synthesis Of C-D-Glycopyranosyl-Hydroquinones
And-Benzoquinones. Inhibition Of Ptp1b. Inhibition Of
And Binding To Glycogen Phosphorylase In The Crystal
pdb|1AXR|A Chain A, Cooperativity Between Hydrogen-Bonding And Charge-Dipole
Interactions In The Inhibition Of Beta-Glycosidases By
Azolopyridines: Evidence From A Study With Glycogen
Phosphorylase B
pdb|1GPY|A Chain A, Crystallographic Binding Studies On The Allosteric
Inhibitor Glucose- 6-Phosphate To T State Glycogen
Phosphorylase B
pdb|3BD7|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Thymine
pdb|3BD8|A Chain A, Glucogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Cytosine
pdb|3BDA|A Chain A, Glycogen Phosphorylase Complex With 1(-D-Glucopyranosyl)
Cyanuric Acid
Length = 842
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug And Caffeine
pdb|1LWN|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
A In Complex With A Potential Hypoglycaemic Drug At 2.0
A Resolution
pdb|1LWO|A Chain A, Crystal Structure Of Rabbit Muscle Glycogen Phosphorylase
A In Complex With A Potential Hypoglycaemic Drug At 2.0
A Resolution
pdb|3AMV|A Chain A, Allosteric Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug
pdb|2GPA|A Chain A, Allosteric Inhibition Of Glycogen Phosphorylase A By A
Potential Antidiabetic Drug
Length = 842
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 254 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 312
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10
pdb|4EKE|A Chain A, Crystal Structure Of Gpb In Complex With Dk11
pdb|4EKY|A Chain A, Crystal Structure Of Gpb In Complex With Dk15
pdb|4EL0|A Chain A, Crystal Structure Of Gpb In Complex With Dk16
pdb|4EL5|A Chain A, Crystal Structure Of Gpb In Complex With Dk12
Length = 825
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 243 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 301
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|B Chain B, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|C Chain C, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
pdb|1ABB|D Chain D, Control Of Phosphorylase B Conformation By A Modified
Cofactor: Crystallographic Studies On R-State Glycogen
Phosphorylase Reconstituted With Pyridoxal
5'-Diphosphate
Length = 828
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 245 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 303
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In
Complex With Thienopyrrole
Length = 825
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 243 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 301
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In
Complex With Ligand
Length = 824
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 243 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 301
>pdb|2FFR|A Chain A, Crystallographic Studies On
N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of
Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D-
Glucopyranosylamine
Length = 825
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 243 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 301
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel
Allosteric Binding Site Of Glycogen Phosphorylase B
Length = 830
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 48/59 (81%)
Query: 253 LKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFK 311
LK N G YIQAVLDRNLAENISRVLYPNDN F GKELRLKQEYF+ AATLQ I FK
Sbjct: 242 LKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFK 300
>pdb|1YGP|A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With
Phosphate Bound In The Active Site.
pdb|1YGP|B Chain B, Phosphorylated Form Of Yeast Glycogen Phosphorylase With
Phosphate Bound In The Active Site
Length = 879
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%)
Query: 256 VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFKDQGR 315
N+GDY +V + AE+I+ VLYPNDN GKELRLKQ+YF CAA+L I FK R
Sbjct: 293 FNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHDILRRFKKSKR 352
>pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With Glucose-1-Phosphate
pdb|1L5V|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With Glucose-1-Phosphate
pdb|1L5W|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltotetraose
pdb|1L5W|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltotetraose
pdb|1L6I|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltopentaose
pdb|1L6I|B Chain B, Crystal Structure Of The Maltodextrin Phosphorylase
Complexed With The Products Of The Enzymatic Reaction
Between Glucose-1-Phosphate And Maltopentaose
pdb|2ASV|A Chain A, X-Ray Studies On Protein Complexes: Enzymatic Catalysis In
Crystals Of E. Coli Maltodextrin Phosphorylase (Malp)
pdb|2ASV|B Chain B, X-Ray Studies On Protein Complexes: Enzymatic Catalysis In
Crystals Of E. Coli Maltodextrin Phosphorylase (Malp)
pdb|2AV6|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AV6|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AW3|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AW3|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase Complexes:
Recognition Of Substrates And Cathalitic Mechanism Of
Phosphorylase Family
pdb|2AZD|A Chain A, X-Ray Studies On Maltodextrin Phosphorylase (Malp)
Complexes: Recognition Of Substrates And Catalytic
Mechanism Of Phosphorylase Family
pdb|2AZD|B Chain B, X-Ray Studies On Maltodextrin Phosphorylase (Malp)
Complexes: Recognition Of Substrates And Catalytic
Mechanism Of Phosphorylase Family
Length = 796
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 256 VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVI 306
NDGD+++A AE +++VLYPNDN F GK+LRL Q+YF CA ++ I
Sbjct: 233 FNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVADI 283
>pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin
Phosphorylase Complex
pdb|2ECP|B Chain B, The Crystal Structure Of The E. Coli Maltodextrin
Phosphorylase Complex
Length = 796
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Query: 256 VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFKDQGR 315
NDGD+++A AE +++VLYPNDN+ GK+LRL Q+YF CA ++ I
Sbjct: 233 FNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADI--------- 283
Query: 316 ALLGYSHSSGREVSK----SVVRHTKHMPSPAI 344
L H +GRE+ + V++ P+ AI
Sbjct: 284 --LRRHHLAGRELHELADYEVIQLNDTHPTIAI 314
>pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli
Maltodextrin Phsphorylase
pdb|1AHP|B Chain B, Oligosaccharide Substrate Binding In Escherichia Coli
Maltodextrin Phsphorylase
Length = 797
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Query: 256 VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVISLPFKDQGR 315
NDGD+++A AE +++VLYPNDN+ GK+LRL Q+YF CA ++ I
Sbjct: 234 FNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADI--------- 284
Query: 316 ALLGYSHSSGREVSK----SVVRHTKHMPSPAI 344
L H +GRE+ + V++ P+ AI
Sbjct: 285 --LRRHHLAGRELHELADYEVIQLNDTHPTIAI 315
>pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1QM5|B Chain B, Phosphorylase Recognition And Phosphorylysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1E4O|A Chain A, Phosphorylase Recognition And Phosphorolysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
pdb|1E4O|B Chain B, Phosphorylase Recognition And Phosphorolysis Of Its
Oligosaccharide Substrate: Answers To A Long Outstanding
Question
Length = 796
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 256 VNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVI 306
NDGD+++A AE +++VLYPNDN+ GK+LRL Q+YF CA ++ I
Sbjct: 233 FNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADI 283
>pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|B Chain B, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|C Chain C, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control.
pdb|2C4M|D Chain D, Starch Phosphorylase: Structural Studies Explain Oxyanion-
Dependent Kinetic Stability And Regulatory Control
Length = 796
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 249 EKIPLKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQVI 306
E+ N + A+++R +I RVLYPND + GK+LR++Q+YF +A+LQ +
Sbjct: 216 EEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQAM 273
>pdb|2EFR|A Chain A, Crystal Structure Of The C-Terminal Tropomyosin Fragment
With N- And C-Terminal Extensions Of The Leucine Zipper
At 1.8 Angstroms Resolution
pdb|2EFR|B Chain B, Crystal Structure Of The C-Terminal Tropomyosin Fragment
With N- And C-Terminal Extensions Of The Leucine Zipper
At 1.8 Angstroms Resolution
pdb|2EFR|C Chain C, Crystal Structure Of The C-Terminal Tropomyosin Fragment
With N- And C-Terminal Extensions Of The Leucine Zipper
At 1.8 Angstroms Resolution
pdb|2EFR|D Chain D, Crystal Structure Of The C-Terminal Tropomyosin Fragment
With N- And C-Terminal Extensions Of The Leucine Zipper
At 1.8 Angstroms Resolution
pdb|2EFS|A Chain A, Crystal Structure Of The C-Terminal Tropomyosin Fragment
With N- And C-Terminal Extensions Of The Leucine Zipper
At 2.0 Angstroms Resolution
pdb|2EFS|B Chain B, Crystal Structure Of The C-Terminal Tropomyosin Fragment
With N- And C-Terminal Extensions Of The Leucine Zipper
At 2.0 Angstroms Resolution
pdb|2EFS|C Chain C, Crystal Structure Of The C-Terminal Tropomyosin Fragment
With N- And C-Terminal Extensions Of The Leucine Zipper
At 2.0 Angstroms Resolution
pdb|2EFS|D Chain D, Crystal Structure Of The C-Terminal Tropomyosin Fragment
With N- And C-Terminal Extensions Of The Leucine Zipper
At 2.0 Angstroms Resolution
Length = 155
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 498 KLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDL 557
K+EE ++ N LE+E+ L++ L+ + A LS G S A LE EL+ V + L
Sbjct: 8 KVEELLSKNYHLENEVARLKKLLERAEER-----AELSEGKS-AELEEELKTVTNNLKSL 61
Query: 558 QRQRQELSAQVKQLTEKSNSLSQQIRPGPTGVAVAGKSVNR 598
+ Q ++ S + + E+ LS +++ T A +SV +
Sbjct: 62 EAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTK 102
>pdb|4F3T|A Chain A, Human Argonaute-2 - Mir-20a Complex
Length = 861
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 16/101 (15%)
Query: 561 RQELSAQVKQLTEKSNSLSQQIRPGPTGVAVAGKSVNRPGPTGVAGKVSKSGLDPTGVAV 620
+Q L ++ + E L + +PG T + V + R T +V KSG P G V
Sbjct: 679 QQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTV 738
Query: 621 DTRIPNPCSLSLGLYP----------------WDDTEDSSD 645
DT+I +P L WDD SSD
Sbjct: 739 DTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSD 779
>pdb|4EI1|A Chain A, Crystal Structure Of Human Argonaute2
pdb|4EI3|A Chain A, Crystal Structure Of Human Argonaute2
Length = 859
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 39/101 (38%), Gaps = 16/101 (15%)
Query: 561 RQELSAQVKQLTEKSNSLSQQIRPGPTGVAVAGKSVNRPGPTGVAGKVSKSGLDPTGVAV 620
+Q L ++ + E L + +PG T + V + R T +V KSG P G V
Sbjct: 677 QQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERVGKSGNIPAGTTV 736
Query: 621 DTRIPNPCSLSLGLYP----------------WDDTEDSSD 645
DT+I +P L WDD SSD
Sbjct: 737 DTKITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFSSD 777
>pdb|2D3E|A Chain A, Crystal Structure Of The C-Terminal Fragment Of Rabbit
Skeletal Alpha-Tropomyosin
pdb|2D3E|B Chain B, Crystal Structure Of The C-Terminal Fragment Of Rabbit
Skeletal Alpha-Tropomyosin
pdb|2D3E|C Chain C, Crystal Structure Of The C-Terminal Fragment Of Rabbit
Skeletal Alpha-Tropomyosin
pdb|2D3E|D Chain D, Crystal Structure Of The C-Terminal Fragment Of Rabbit
Skeletal Alpha-Tropomyosin
Length = 134
Score = 36.6 bits (83), Expect = 0.056, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 498 KLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDL 557
K+EE ++ N LE+E+ L++ L+ + A LS G A LE EL+ V + L
Sbjct: 4 KVEELLSKNYHLENEVARLKKLLERAEER-----AELSEG-KCAELEEELKTVTNNLKSL 57
Query: 558 QRQRQELSAQVKQLTEKSNSLSQQIRPGPTGVAVAGKSVNR 598
+ Q ++ S + + E+ LS +++ T A +SV +
Sbjct: 58 EAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTK 98
>pdb|2I1J|A Chain A, Moesin From Spodoptera Frugiperda At 2.1 Angstroms
Resolution
pdb|2I1K|A Chain A, Moesin From Spodoptera Frugiperda Reveals The Coiled-Coil
Domain At 3.0 Angstrom Resolution
Length = 575
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 497 KKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPS-VAALEAELRRVQALVG 555
+KL+ +AA R E + + +L+ + E+ A+L + LE +LR++QA
Sbjct: 321 EKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQANLLEAQDMILRLEEQLRQLQAAKE 380
Query: 556 DLQRQRQELSAQVKQLTEKSN 576
+L++++ EL A +++L E N
Sbjct: 381 ELEQRQNELQAMMQRLEETKN 401
>pdb|4EB8|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EB8|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EB8|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4ECE|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4ECE|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Guanine
pdb|4GKA|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|D Chain D, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|E Chain E, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
pdb|4GKA|F Chain F, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Phosphate
Length = 324
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 39 GYTYEDYKNTAEYLLSHTKHRPQVAIICGSGLG 71
>pdb|4EAR|A Chain A, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EAR|B Chain B, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
pdb|4EAR|C Chain C, Crystal Structure Of Purine Nucleoside Phosphorylase
(w16y, W94y, W178y, H257w) Mutant From Human Complexed
With Dadme-immg And Phosphate
Length = 324
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 39 GYTYEDYKNTAEYLLSHTKHRPQVAIICGSGLG 71
>pdb|2A0X|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257f
Mutant
pdb|2ON6|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257f With Imm-H
Length = 289
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 4 GYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLG 36
>pdb|2A0Y|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257d
Mutant
pdb|2OC4|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257d With Imm-H
Length = 289
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 4 GYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLG 36
>pdb|2A0W|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase H257g
Mutant
pdb|2OC9|A Chain A, Crystal Stucture Of Human Purine Nucleoside Phosphorylase
Mutant H257g With Imm-H
Length = 289
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 4 GYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLG 36
>pdb|1PF7|E Chain E, Crystal Structure Of Human Pnp Complexed With Immucillin H
pdb|1RR6|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Immucillin-H And Phosphate
pdb|1RSZ|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Dadme-Immucillin-H And Sulfate
pdb|1RT9|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With Immucillin-H And Sulfate
pdb|1YRY|E Chain E, Crystal Structure Of Human Pnp Complexed With Mesg
pdb|1ULA|A Chain A, Application Of Crystallographic And Modeling Methods In
The Design Of Purine Nucleoside Phosphorylase Inhibitors
pdb|1ULB|A Chain A, Application Of Crystallographic And Modeling Methods In
The Design Of Purine Nucleoside Phosphorylase Inhibitors
pdb|3BGS|A Chain A, Structure Of Human Purine Nucleoside Phosphorylase With L-
Dadme-Immh And Phosphate
pdb|2Q7O|E Chain E, Structure Of Human Purine Nucleoside Phosphorylase In
Complex With L- Immucillin-H
pdb|3D1V|A Chain A, Crystal Structure Of Human Pnp Complexed With
2-Mercapto(3h) Quinazolinone
pdb|3K8O|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|Q Chain Q, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|S Chain S, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|T Chain T, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|U Chain U, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8O|Y Chain Y, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Datme-Immh
pdb|3K8Q|A Chain A, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Serme-Immucillin H
pdb|3INY|A Chain A, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With 7-Deazaguanine
Length = 289
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 4 GYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLG 36
>pdb|1M73|E Chain E, Crystal Structure Of Human Pnp At 2.3a Resolution
pdb|1RCT|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
Complexed With Inosine
pdb|1V2H|E Chain E, Crystal Structure Of Human Pnp Complexed With Guanine
pdb|1V3Q|E Chain E, Structure Of Human Pnp Complexed With Ddi
pdb|1PWY|E Chain E, Crystal Structure Of Human Pnp Complexed With Acyclovir
pdb|1RFG|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
Complexed With Guanosine
pdb|1V41|E Chain E, Crystal Structure Of Human Pnp Complexed With 8-Azaguanine
pdb|1V45|E Chain E, Crystal Structure Of Human Pnp Complexed With
3-Deoxyguanosine
Length = 288
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 3 GYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLG 35
>pdb|3PHB|E Chain E, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|Q Chain Q, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|S Chain S, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|T Chain T, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|U Chain U, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
pdb|3PHB|Y Chain Y, Crystal Structure Of Human Purine Nucleoside Phosphorylase
In Complex With Dadme-Immg
Length = 324
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 39 GYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLG 71
>pdb|3GB9|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GB9|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,n243d Complexed With 2-fluoroadenine
pdb|3GGS|A Chain A, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|B Chain B, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
pdb|3GGS|C Chain C, Human Purine Nucleoside Phosphorylase Double Mutant
E201q,N243d Complexed With 2-Fluoro-2'-Deoxyadenosine
Length = 311
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 319 GYSHSSGREVSKSVVRHTKHMPSPAIVATTGSG 351
GY++ + ++ ++ HTKH P AI+ +G G
Sbjct: 26 GYTYEDYKNTAEWLLSHTKHRPQVAIICGSGLG 58
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,328,364
Number of Sequences: 62578
Number of extensions: 805461
Number of successful extensions: 1842
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1793
Number of HSP's gapped (non-prelim): 55
length of query: 746
length of database: 14,973,337
effective HSP length: 106
effective length of query: 640
effective length of database: 8,340,069
effective search space: 5337644160
effective search space used: 5337644160
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)