Query psy2772
Match_columns 746
No_of_seqs 237 out of 638
Neff 2.5
Searched_HMMs 29240
Date Sat Aug 17 00:45:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2772.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2772hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 6E-49 2E-53 439.2 -0.5 155 228-403 263-422 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 3.8E-45 1.3E-49 407.9 3.3 161 228-401 216-381 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 4E-44 1.4E-48 398.6 -0.5 154 228-402 203-361 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 7.8E-44 2.7E-48 396.3 0.1 155 227-402 192-351 (796)
5 3oja_B Anopheles plasmodium-re 96.6 0.03 1E-06 58.7 14.2 71 505-588 517-587 (597)
6 1i84_S Smooth muscle myosin he 96.5 0.0018 6.1E-08 75.3 4.9 87 432-521 879-965 (1184)
7 1c1g_A Tropomyosin; contractIl 96.1 0.39 1.3E-05 43.0 17.0 28 434-461 23-50 (284)
8 2dfs_A Myosin-5A; myosin-V, in 96.0 0.031 1.1E-06 65.2 11.7 126 439-573 915-1044(1080)
9 1c1g_A Tropomyosin; contractIl 96.0 0.35 1.2E-05 43.3 16.0 12 504-515 76-87 (284)
10 1i84_S Smooth muscle myosin he 95.6 0.049 1.7E-06 63.5 11.1 53 472-524 888-940 (1184)
11 3na7_A HP0958; flagellar bioge 95.5 0.44 1.5E-05 46.8 16.1 95 421-518 8-104 (256)
12 2dfs_A Myosin-5A; myosin-V, in 95.2 0.16 5.3E-06 59.5 13.6 83 468-566 969-1051(1080)
13 3na7_A HP0958; flagellar bioge 94.7 1.3 4.3E-05 43.5 16.5 109 443-568 65-173 (256)
14 3oja_B Anopheles plasmodium-re 94.6 0.19 6.5E-06 52.7 11.1 30 433-462 458-487 (597)
15 3tnu_B Keratin, type II cytosk 93.6 0.95 3.3E-05 40.7 12.2 90 423-518 35-124 (129)
16 3tnu_A Keratin, type I cytoske 93.1 1.1 3.8E-05 40.5 11.8 88 425-518 39-126 (131)
17 1gk4_A Vimentin; intermediate 90.6 3 0.0001 35.4 11.1 77 439-521 2-78 (84)
18 3o0z_A RHO-associated protein 90.1 1.7 5.7E-05 42.1 10.0 84 427-510 44-131 (168)
19 3zbh_A ESXA; unknown function, 89.9 4.5 0.00015 32.7 11.1 79 436-515 14-95 (99)
20 3vkg_A Dynein heavy chain, cyt 89.6 3.2 0.00011 54.0 14.9 86 488-579 2019-2104(3245)
21 3mov_A Lamin-B1; LMNB1, B-type 89.6 2.2 7.5E-05 37.5 9.6 79 436-520 10-88 (95)
22 2ocy_A RAB guanine nucleotide 88.9 1.8 6E-05 41.4 9.1 87 477-568 52-145 (154)
23 3u59_A Tropomyosin beta chain; 88.2 4 0.00014 35.5 10.2 89 433-521 4-96 (101)
24 3u1c_A Tropomyosin alpha-1 cha 87.9 4.1 0.00014 35.7 10.2 89 433-521 4-96 (101)
25 1x8y_A Lamin A/C; structural p 87.0 3.2 0.00011 35.5 8.7 78 438-521 3-80 (86)
26 3gwk_C SAG1039, putative uncha 86.9 5.6 0.00019 32.6 10.0 78 436-514 13-93 (98)
27 3cve_A Homer protein homolog 1 85.2 5.6 0.00019 34.0 9.2 59 495-566 5-67 (72)
28 3ol1_A Vimentin; structural ge 85.0 16 0.00055 32.7 12.7 31 543-573 67-97 (119)
29 3cvf_A Homer-3, homer protein 84.2 6.4 0.00022 34.1 9.3 61 493-566 9-73 (79)
30 3oja_A Leucine-rich immune mol 84.0 28 0.00095 36.0 15.7 51 471-521 412-466 (487)
31 1wt6_A Myotonin-protein kinase 83.8 5 0.00017 35.1 8.5 45 478-522 26-70 (81)
32 2efk_A CDC42-interacting prote 83.5 32 0.0011 32.9 14.9 45 477-521 110-154 (301)
33 3ghg_A Fibrinogen alpha chain; 83.4 4.4 0.00015 45.1 10.0 29 498-526 103-132 (562)
34 2v71_A Nuclear distribution pr 82.7 9.6 0.00033 37.4 11.0 136 421-565 31-171 (189)
35 2vs0_A Virulence factor ESXA; 82.3 7.5 0.00026 31.3 8.7 77 437-514 12-91 (97)
36 3mq9_A Bone marrow stromal ant 81.4 17 0.00058 37.4 12.9 49 449-497 370-418 (471)
37 2v71_A Nuclear distribution pr 80.7 27 0.00092 34.3 13.3 77 491-583 50-126 (189)
38 1l8d_A DNA double-strand break 79.2 17 0.00057 31.2 10.2 74 431-504 10-99 (112)
39 1go4_E MAD1 (mitotic arrest de 78.8 4.6 0.00016 36.3 6.7 65 429-493 17-92 (100)
40 2ocy_A RAB guanine nucleotide 78.8 12 0.00041 35.7 10.0 90 478-573 15-122 (154)
41 1m1j_C Fibrinogen gamma chain; 77.0 19 0.00065 38.6 12.0 96 429-524 36-132 (409)
42 2e7s_A RAB guanine nucleotide 76.3 1.9 6.6E-05 40.5 3.7 47 480-526 43-89 (135)
43 4ioe_A Secreted protein ESXB; 74.7 31 0.0011 27.7 10.2 74 435-509 13-89 (93)
44 2fxo_A Myosin heavy chain, car 74.0 12 0.00041 33.8 8.2 50 472-521 72-121 (129)
45 3l4q_C Phosphatidylinositol 3- 73.7 33 0.0011 33.2 11.6 102 482-583 16-134 (170)
46 1ic2_A Tropomyosin alpha chain 73.6 8.6 0.00029 32.3 6.7 31 434-464 2-32 (81)
47 4dnd_A Syntaxin-10, SYN10; str 73.4 11 0.00038 34.5 7.9 65 428-492 64-128 (130)
48 3ol1_A Vimentin; structural ge 73.1 40 0.0014 30.2 11.3 44 479-522 37-80 (119)
49 3tnu_B Keratin, type II cytosk 72.5 33 0.0011 30.7 10.7 41 483-523 36-76 (129)
50 3oja_A Leucine-rich immune mol 70.8 26 0.00089 36.2 10.9 52 453-504 332-395 (487)
51 2v66_B Nuclear distribution pr 70.7 27 0.00093 31.8 9.7 65 503-583 9-73 (111)
52 1m1j_C Fibrinogen gamma chain; 70.3 27 0.00093 37.4 11.2 43 472-525 27-69 (409)
53 2v4h_A NF-kappa-B essential mo 69.9 12 0.00042 34.3 7.2 82 411-492 18-106 (110)
54 3swk_A Vimentin; cytoskeleton, 69.0 26 0.00088 30.1 8.7 68 498-578 8-82 (86)
55 1gk4_A Vimentin; intermediate 68.8 23 0.00077 30.0 8.3 76 470-554 2-77 (84)
56 3fav_A ESAT-6-like protein ESX 67.3 46 0.0016 27.5 9.8 73 441-514 17-92 (101)
57 3tnu_A Keratin, type I cytoske 67.0 30 0.001 31.1 9.2 37 484-520 39-75 (131)
58 1f5n_A Interferon-induced guan 66.4 38 0.0013 37.5 11.7 20 555-574 563-582 (592)
59 2eqb_B RAB guanine nucleotide 66.4 74 0.0025 28.6 12.3 54 471-524 7-67 (97)
60 1fmh_A General control protein 65.4 5.1 0.00017 29.7 3.1 27 491-517 2-28 (33)
61 3s4r_A Vimentin; alpha-helix, 65.2 39 0.0013 29.4 9.2 65 438-521 23-87 (93)
62 1x8y_A Lamin A/C; structural p 64.6 16 0.00054 31.2 6.5 78 470-556 4-81 (86)
63 1u4q_A Spectrin alpha chain, b 63.6 1E+02 0.0035 29.3 15.7 103 470-581 182-284 (322)
64 3fav_B ESAT-6, 6 kDa early sec 63.6 16 0.00055 29.6 6.2 75 434-513 15-89 (94)
65 2efl_A Formin-binding protein 61.9 1.1E+02 0.0038 29.1 18.0 47 475-521 115-161 (305)
66 3mq9_A Bone marrow stromal ant 61.7 50 0.0017 34.0 10.8 80 441-524 373-463 (471)
67 4fi5_A Nucleoprotein; structur 61.2 50 0.0017 30.5 9.5 28 496-523 21-48 (113)
68 4dyl_A Tyrosine-protein kinase 60.2 44 0.0015 34.6 10.2 85 488-577 307-391 (406)
69 3haj_A Human pacsin2 F-BAR; pa 59.7 97 0.0033 32.8 12.8 45 478-522 131-175 (486)
70 2v66_B Nuclear distribution pr 59.4 78 0.0027 28.9 10.4 41 474-514 61-101 (111)
71 3bas_A Myosin heavy chain, str 59.1 85 0.0029 26.8 10.9 36 539-574 50-85 (89)
72 3vkg_A Dynein heavy chain, cyt 59.1 64 0.0022 42.6 13.3 22 340-361 1703-1725(3245)
73 3c3g_A Alpha/beta peptide with 58.5 11 0.00036 28.5 3.8 30 492-521 2-31 (33)
74 3m48_A General control protein 57.4 6 0.00021 29.8 2.3 29 493-521 3-31 (33)
75 1cun_A Protein (alpha spectrin 57.2 1.1E+02 0.0037 27.4 16.2 101 470-579 73-173 (213)
76 1x79_B RAB GTPase binding effe 57.2 99 0.0034 28.3 10.7 97 474-579 4-104 (112)
77 3c3f_A Alpha/beta peptide with 56.9 12 0.0004 28.4 3.8 30 492-521 3-32 (34)
78 3sja_C Golgi to ER traffic pro 56.7 40 0.0014 28.5 7.4 49 473-521 3-56 (65)
79 3ni0_A Bone marrow stromal ant 56.4 33 0.0011 31.1 7.2 50 475-524 17-87 (99)
80 3uul_A Utrophin; spectrin repe 56.2 82 0.0028 25.8 15.2 106 440-572 4-116 (118)
81 1yvl_A Signal transducer and a 56.1 1.5E+02 0.005 34.0 14.1 148 431-581 59-230 (683)
82 4dk0_A Putative MACA; alpha-ha 55.6 13 0.00045 36.6 5.2 23 497-519 115-137 (369)
83 2oxj_A Hybrid alpha/beta pepti 55.3 17 0.00057 27.6 4.4 30 492-521 3-32 (34)
84 3sjb_C Golgi to ER traffic pro 54.0 36 0.0012 30.4 7.1 53 473-525 20-77 (93)
85 2lw1_A ABC transporter ATP-bin 52.8 77 0.0026 26.8 8.8 47 440-486 24-73 (89)
86 3uun_A Dystrophin; triple heli 52.2 94 0.0032 25.3 10.8 68 438-505 47-114 (119)
87 2c5k_T Syntaxin TLG1, T-snare 51.7 24 0.00083 30.8 5.6 56 431-492 36-91 (95)
88 4i0x_B ESAT-6-like protein MAB 51.1 78 0.0027 26.6 8.6 77 434-513 21-97 (103)
89 1deq_A Fibrinogen (alpha chain 50.3 1.1E+02 0.0038 33.1 11.3 97 418-514 43-158 (390)
90 1ic2_A Tropomyosin alpha chain 49.8 1.1E+02 0.0039 25.5 9.8 49 473-521 3-51 (81)
91 1u5p_A Spectrin alpha chain, b 49.6 1.5E+02 0.0051 26.8 16.5 88 469-561 75-162 (216)
92 1deb_A APC protein, adenomatou 48.9 52 0.0018 27.0 6.6 43 472-521 6-48 (54)
93 2xnx_M M protein, M1-BC1; cell 48.8 19 0.00066 34.3 4.8 31 482-512 79-109 (146)
94 3hhm_B NISH2 P85alpha; PI3KCA, 48.1 1.4E+02 0.0047 31.5 11.6 22 542-563 237-258 (373)
95 1l8d_A DNA double-strand break 46.9 61 0.0021 27.7 7.3 33 431-463 3-35 (112)
96 2e7s_A RAB guanine nucleotide 46.9 18 0.00061 34.0 4.3 60 509-574 44-111 (135)
97 1m1j_B Fibrinogen beta chain; 46.8 1.1E+02 0.0038 33.5 10.9 32 543-574 166-197 (464)
98 3o0z_A RHO-associated protein 46.5 2.1E+02 0.0073 27.7 16.2 22 544-565 117-138 (168)
99 2k48_A Nucleoprotein; viral pr 45.8 49 0.0017 30.3 6.8 54 426-482 26-83 (107)
100 3swk_A Vimentin; cytoskeleton, 44.8 1E+02 0.0036 26.3 8.4 32 434-465 3-34 (86)
101 1uo4_A General control protein 44.8 12 0.0004 28.4 2.1 29 493-521 4-32 (34)
102 3vem_A Helicase protein MOM1; 44.5 1.2E+02 0.0041 28.1 9.1 63 462-524 18-81 (115)
103 3hhm_B NISH2 P85alpha; PI3KCA, 44.1 1.2E+02 0.004 32.1 10.3 46 538-583 198-243 (373)
104 2wuj_A Septum site-determining 43.8 19 0.00065 28.8 3.4 34 487-520 24-57 (57)
105 2xv5_A Lamin-A/C; structural p 43.6 94 0.0032 26.3 7.8 50 472-521 8-57 (74)
106 3cve_A Homer protein homolog 1 43.1 54 0.0018 28.0 6.2 56 434-499 3-58 (72)
107 3u06_A Protein claret segregat 42.6 64 0.0022 34.2 8.2 67 505-585 4-70 (412)
108 1kd8_B GABH BLL, GCN4 acid bas 41.9 44 0.0015 25.6 4.9 32 492-523 3-34 (36)
109 3edv_A Spectrin beta chain, br 41.6 2.4E+02 0.0083 26.9 17.2 92 469-565 185-276 (323)
110 3plt_A Sphingolipid long chain 41.5 77 0.0026 32.1 8.1 62 430-502 96-157 (234)
111 2r2v_A GCN4 leucine zipper; co 41.3 37 0.0013 25.7 4.4 29 492-520 3-31 (34)
112 3ghg_C Fibrinogen gamma chain; 41.2 2.1E+02 0.0073 30.9 11.9 25 498-525 109-133 (411)
113 3q8t_A Beclin-1; autophagy, AT 40.9 1.8E+02 0.0062 25.3 12.3 42 480-521 8-49 (96)
114 3uul_A Utrophin; spectrin repe 40.3 1.5E+02 0.0051 24.2 11.0 64 442-505 51-114 (118)
115 3hnw_A Uncharacterized protein 39.9 1E+02 0.0036 28.4 8.2 70 446-519 56-125 (138)
116 1deq_A Fibrinogen (alpha chain 39.8 2.3E+02 0.0077 30.8 11.7 71 449-526 64-135 (390)
117 3abh_A Pacsin2, protein kinase 39.7 2.7E+02 0.0093 27.0 12.0 19 290-311 56-74 (312)
118 1f5n_A Interferon-induced guan 39.3 1.2E+02 0.0043 33.5 10.1 48 472-519 462-509 (592)
119 3i00_A HIP-I, huntingtin-inter 39.3 1.7E+02 0.0059 26.7 9.4 41 481-521 45-85 (120)
120 2bni_A General control protein 39.1 22 0.00074 27.0 2.8 30 492-521 3-32 (34)
121 2hy6_A General control protein 38.9 30 0.001 26.2 3.6 29 493-521 4-32 (34)
122 3mov_A Lamin-B1; LMNB1, B-type 37.8 32 0.0011 30.1 4.2 71 472-551 15-85 (95)
123 2ic6_A Nucleocapsid protein; h 37.3 82 0.0028 27.4 6.5 44 439-482 6-53 (78)
124 1nkp_B MAX protein, MYC proto- 37.2 50 0.0017 27.4 5.1 45 420-464 36-80 (83)
125 3fpp_A Macrolide-specific effl 37.2 20 0.00068 35.0 3.2 48 475-522 89-139 (341)
126 3q8t_A Beclin-1; autophagy, AT 37.1 2.1E+02 0.0072 24.9 11.0 67 435-518 8-74 (96)
127 3ghg_A Fibrinogen alpha chain; 36.6 1.2E+02 0.0042 34.1 9.4 44 473-516 114-157 (562)
128 3r6n_A Desmoplakin; spectrin r 36.3 4.3E+02 0.015 28.3 15.4 25 498-522 91-115 (450)
129 2no2_A HIP-I, huntingtin-inter 36.1 1.5E+02 0.0051 26.5 8.3 13 497-509 89-101 (107)
130 2l5g_A GPS2 protein, G protein 36.1 19 0.00065 27.8 2.2 18 433-450 17-34 (38)
131 2w83_C C-JUN-amino-terminal ki 35.7 1.2E+02 0.004 26.5 7.2 67 494-569 6-75 (77)
132 3hnw_A Uncharacterized protein 35.7 2.7E+02 0.0091 25.7 10.3 33 484-516 97-129 (138)
133 4i0x_A ESAT-6-like protein MAB 35.5 1.2E+02 0.0041 25.1 7.2 72 443-515 12-86 (94)
134 1kd8_A GABH AIV, GCN4 acid bas 35.3 46 0.0016 25.5 4.1 31 493-523 4-34 (36)
135 2ke4_A CDC42-interacting prote 35.0 57 0.0019 28.8 5.4 33 438-470 22-54 (98)
136 2x3v_A Syndapin I, protein kin 34.6 3.4E+02 0.012 26.6 12.1 56 497-561 183-238 (337)
137 2ic9_A Nucleocapsid protein; h 34.4 90 0.0031 28.1 6.5 44 439-482 6-53 (96)
138 1u4q_A Spectrin alpha chain, b 34.1 3.1E+02 0.011 26.0 16.3 86 469-559 75-160 (322)
139 3cvf_A Homer-3, homer protein 33.8 78 0.0027 27.4 5.9 56 434-499 9-64 (79)
140 4ev6_A Magnesium transport pro 33.5 3.8E+02 0.013 26.8 12.3 57 427-495 160-216 (339)
141 3aco_A Pacsin2, protein kinase 32.9 3.8E+02 0.013 26.7 13.0 21 288-311 54-74 (350)
142 3t98_B Nucleoporin NUP58/NUP45 32.2 2.6E+02 0.0089 24.5 9.2 72 430-507 11-82 (93)
143 2wq1_A General control protein 32.1 65 0.0022 24.3 4.4 28 493-520 3-30 (33)
144 1wle_A Seryl-tRNA synthetase; 31.5 5.1E+02 0.018 28.3 13.1 34 468-501 69-102 (501)
145 2eqb_B RAB guanine nucleotide 31.0 2.5E+02 0.0085 25.2 8.8 78 434-521 8-93 (97)
146 1nlw_A MAD protein, MAX dimeri 30.6 63 0.0022 27.3 4.8 44 420-463 36-79 (80)
147 1s35_A Beta-I spectrin, spectr 30.4 3E+02 0.01 24.7 18.2 118 440-563 42-162 (214)
148 3ter_A Mammalian stromal inter 30.1 2.2E+02 0.0077 26.9 8.7 62 445-508 6-70 (136)
149 3rrk_A V-type ATPase 116 kDa s 30.1 1.8E+02 0.0062 29.0 8.7 77 444-520 195-280 (357)
150 3pe0_A Plectin; cytoskeleton, 29.9 4.2E+02 0.014 26.2 14.5 102 470-580 81-185 (283)
151 1ci6_A Transcription factor AT 29.7 2.2E+02 0.0076 23.0 7.7 53 466-521 9-61 (63)
152 1nfn_A Apolipoprotein E3; lipi 29.7 2.8E+02 0.0097 26.4 9.7 18 482-499 105-122 (191)
153 2i1j_A Moesin; FERM, coiled-co 29.6 60 0.002 35.7 5.6 27 439-465 322-348 (575)
154 3a7p_A Autophagy protein 16; c 29.5 2.4E+02 0.0081 27.1 8.9 35 479-513 99-133 (152)
155 3nmd_A CGMP dependent protein 29.3 18 0.00061 31.0 1.2 29 425-453 41-69 (72)
156 3vlc_E Golgi to ER traffic pro 29.1 48 0.0016 29.7 3.9 52 473-524 27-83 (94)
157 1gax_A Valrs, valyl-tRNA synth 29.0 1.1E+02 0.0039 35.2 7.9 60 435-494 797-860 (862)
158 3abh_A Pacsin2, protein kinase 28.5 1.5E+02 0.0052 28.8 7.7 43 479-521 139-181 (312)
159 1go4_E MAD1 (mitotic arrest de 28.4 1.7E+02 0.0056 26.4 7.2 47 433-479 14-73 (100)
160 1m1j_B Fibrinogen beta chain; 28.3 2.9E+02 0.01 30.3 10.5 23 429-451 88-113 (464)
161 4b4t_L 26S protease subunit RP 28.2 49 0.0017 35.3 4.5 12 603-614 130-141 (437)
162 1xaw_A Occludin; coiled-coil, 28.2 1.1E+02 0.0038 28.9 6.4 69 471-560 68-138 (140)
163 3qne_A Seryl-tRNA synthetase, 28.1 1.9E+02 0.0065 31.7 9.1 60 440-500 4-64 (485)
164 1ses_A Seryl-tRNA synthetase; 28.0 3.1E+02 0.011 28.9 10.5 94 440-557 4-97 (421)
165 1sjj_A Actinin; 3-helix bundle 28.0 6.4E+02 0.022 27.8 13.3 90 470-563 444-540 (863)
166 4fi5_A Nucleoprotein; structur 27.7 1.2E+02 0.0042 27.9 6.4 44 439-482 23-70 (113)
167 1gqe_A Release factor 2, RF2; 27.4 5.9E+02 0.02 27.1 13.0 38 446-483 26-65 (365)
168 2uwj_E Type III export protein 27.3 1.8E+02 0.006 25.0 6.8 57 431-488 3-64 (70)
169 3fb2_A Spectrin alpha chain, b 26.9 3.7E+02 0.013 24.6 15.2 86 471-561 87-172 (218)
170 3d5a_X RF1, peptide chain rele 26.7 4E+02 0.014 28.4 10.9 81 439-524 4-96 (354)
171 4h22_A Leucine-rich repeat fli 26.7 2.2E+02 0.0077 25.8 7.8 42 480-521 41-82 (103)
172 2efr_A General control protein 26.4 4.2E+02 0.015 25.2 17.4 46 478-523 72-117 (155)
173 3fpp_A Macrolide-specific effl 26.4 2.5E+02 0.0085 27.3 8.8 32 479-510 72-103 (341)
174 3m9b_A Proteasome-associated A 26.3 41 0.0014 34.4 3.3 40 482-521 53-92 (251)
175 4etp_A Kinesin-like protein KA 26.1 1.7E+02 0.0059 30.8 8.1 65 507-585 6-70 (403)
176 3iv1_A Tumor susceptibility ge 25.9 1.1E+02 0.0038 26.5 5.5 33 548-580 42-74 (78)
177 2i1j_A Moesin; FERM, coiled-co 25.9 20 0.00067 39.4 1.1 27 536-562 403-429 (575)
178 4dk0_A Putative MACA; alpha-ha 25.7 4.8E+02 0.016 25.5 12.5 37 538-574 115-151 (369)
179 3jsv_C NF-kappa-B essential mo 25.6 62 0.0021 29.0 3.9 70 424-493 9-85 (94)
180 3zcc_A HAMP, osmolarity sensor 25.6 2E+02 0.0068 22.1 6.6 20 427-446 37-56 (114)
181 1bg1_A Protein (transcription 25.3 6E+02 0.02 28.8 12.5 92 424-518 20-119 (596)
182 3uun_A Dystrophin; triple heli 25.2 2.7E+02 0.0093 22.5 15.3 58 440-497 4-64 (119)
183 3i00_A HIP-I, huntingtin-inter 25.2 3.3E+02 0.011 24.8 8.8 42 480-524 19-60 (120)
184 1ik9_A DNA repair protein XRCC 24.9 63 0.0022 31.7 4.3 45 433-477 134-178 (213)
185 2fxo_A Myosin heavy chain, car 24.5 3.8E+02 0.013 23.9 17.1 43 479-521 51-93 (129)
186 1g6u_A Domain swapped dimer; d 24.4 2E+02 0.0068 22.8 6.1 44 513-563 2-45 (48)
187 3c98_B Syntaxin-1A; protein co 24.2 4.2E+02 0.014 24.4 11.4 33 428-460 37-69 (279)
188 4emc_A Monopolin complex subun 24.1 1.3E+02 0.0043 29.9 6.2 47 478-524 8-54 (190)
189 3lay_A Zinc resistance-associa 24.0 4E+02 0.014 25.5 9.5 28 498-525 114-141 (175)
190 2f1m_A Acriflavine resistance 24.0 2.8E+02 0.0095 26.2 8.5 25 497-521 98-122 (277)
191 1gk6_A Vimentin; intermediate 23.8 2.8E+02 0.0096 22.2 7.6 44 478-521 9-52 (59)
192 2fp1_A Chorismate mutase; alph 23.7 3.5E+02 0.012 25.4 8.9 65 441-509 35-121 (166)
193 3ghg_C Fibrinogen gamma chain; 23.6 6.5E+02 0.022 27.2 12.0 98 472-583 27-136 (411)
194 2lw1_A ABC transporter ATP-bin 23.6 2.4E+02 0.0083 23.7 7.1 20 497-516 56-75 (89)
195 2iub_A CORA, divalent cation t 23.5 5.8E+02 0.02 25.7 12.8 62 428-501 185-246 (363)
196 2vs0_A Virulence factor ESXA; 23.4 2.8E+02 0.0095 22.0 8.6 18 461-478 1-18 (97)
197 2p22_A Suppressor protein STP2 23.2 82 0.0028 30.5 4.6 44 539-582 50-93 (174)
198 4dyl_A Tyrosine-protein kinase 22.7 5.7E+02 0.02 26.4 11.1 45 477-521 113-158 (406)
199 2akf_A Coronin-1A; coiled coil 22.7 1.3E+02 0.0046 22.3 4.5 27 32-58 3-29 (32)
200 3gpv_A Transcriptional regulat 22.6 1.6E+02 0.0054 26.6 6.2 32 551-582 94-125 (148)
201 2efl_A Formin-binding protein 22.3 5E+02 0.017 24.6 15.6 11 300-310 48-58 (305)
202 2pnv_A Small conductance calci 21.8 72 0.0025 24.9 3.2 36 549-584 6-41 (43)
203 3edv_A Spectrin beta chain, br 21.7 5.3E+02 0.018 24.6 17.0 101 469-579 79-179 (323)
204 3zrx_A AF1503 protein, osmolar 21.4 2.1E+02 0.0073 21.8 6.0 6 415-420 22-27 (115)
205 3s84_A Apolipoprotein A-IV; fo 21.3 6.3E+02 0.022 25.3 12.8 110 429-570 83-216 (273)
206 1ek9_A Outer membrane protein 21.2 5.4E+02 0.018 24.9 10.0 19 552-570 211-229 (428)
207 3zwh_Q Myosin-9; Ca-binding pr 20.4 57 0.0019 25.8 2.4 26 497-522 6-31 (45)
208 2f1m_A Acriflavine resistance 20.2 3.6E+02 0.012 25.4 8.4 11 414-424 44-54 (277)
209 2ic9_A Nucleocapsid protein; h 20.1 4.8E+02 0.016 23.5 9.2 25 499-523 7-31 (96)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=6e-49 Score=439.16 Aligned_cols=155 Identities=27% Similarity=0.374 Sum_probs=146.2
Q ss_pred cccccccCCcceeEEeec--cCCCCCCCCCCCChhHHHHHHHHHhccccceecccCCCCcccchhhhhhhhhhhhhhHHH
Q psy2772 228 KRHLVELEKQVSITFNLT--ERNEKIPLKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQV 305 (746)
Q Consensus 228 ~~~v~Gye~~~vNtLRLw--esseeFDLesFN~GdY~~Avd~r~~AEnITrVLYPDDSt~eGKeLRLKQQYFfVSASLQD 305 (746)
.+||+||+++++|+|||| ++.+.|||+.||.|||.+|++++..+|+||+||||+|++++||+|||||||||||||+||
T Consensus 263 D~Pi~Gy~~~~~n~lRLW~a~~~~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl~sa~lqd 342 (879)
T 1ygp_A 263 DFPVPGFKTSNVNNLRLWQARPTTEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFWCAASLHD 342 (879)
T ss_dssp EEEEECSSCCCEEEEEEEEEEESCSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCcCCCceEEEEEEEeccCcccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhhhhhHHHH
Confidence 458899999999999999 568899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCcccccccceeecccCCCCceEEEecCCCCccchhhhhhhhccccCcccccceeEEEE---Ee
Q psy2772 306 ISLPFKDQGRALLGYSHSSGREVSKSVVRHTKHMPSPAIVATTGSGPFLGYPKSDNIILPRKQHLFLDSVIWYIS---LL 382 (746)
Q Consensus 306 IIRrfKkrg~dl~~~~~~~L~~L~dkVAIhi~~fp~kvaIQiNDTHPsLaIPELmRIL~de~gl~wdeAv~wdIt---~a 382 (746)
|||+|++.+++ |+.||++++||||||||+|+||||||+|+|++|++|++| |+|| |+
T Consensus 343 ilr~~~~~~~~-------------------l~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~A--w~iv~~t~~ 401 (879)
T 1ygp_A 343 ILRRFKKSKRP-------------------WTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEA--WDIVTKTFA 401 (879)
T ss_dssp HHHHHHHHTCC-------------------GGGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHH--HHHHHHHEE
T ss_pred HHHHHHHhCCC-------------------hhhcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHH--HHHHHHhee
Confidence 99999998854 445589999999999999999999999999999999999 9999 99
Q ss_pred eeccccccccccccccccccc
Q psy2772 383 EVYRLGGPLACGPWKVHAELP 403 (746)
Q Consensus 383 YTNHTILpEALEkWpv~~~l~ 403 (746)
|||||++|||||+||+++..-
T Consensus 402 yTnHT~lpealE~wpv~l~~~ 422 (879)
T 1ygp_A 402 YTNHTVMQEALEKWPRRLFGH 422 (879)
T ss_dssp EEECCCSGGGSCEEEHHHHHH
T ss_pred eecCcCchHhhccCCHHHHHH
Confidence 999999999999999987643
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=3.8e-45 Score=407.88 Aligned_cols=161 Identities=38% Similarity=0.481 Sum_probs=134.0
Q ss_pred cccccccCCcceeEEeec--cCCCCCCCCCCCChhHHHHHHHHHhccccceecccCCCCcccchhhhhhhhhhhhhhHHH
Q psy2772 228 KRHLVELEKQVSITFNLT--ERNEKIPLKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQV 305 (746)
Q Consensus 228 ~~~v~Gye~~~vNtLRLw--esseeFDLesFN~GdY~~Avd~r~~AEnITrVLYPDDSt~eGKeLRLKQQYFfVSASLQD 305 (746)
.++|+||+++++|+|||| +++++||+..||.|+|..|+.+++.+||||+||||+|++++||+|||||||||||||+||
T Consensus 216 D~pi~Gy~~~~vn~lRlW~a~~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~lqd 295 (824)
T 2gj4_A 216 DTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQD 295 (824)
T ss_dssp EEEEECSSSSCEEEEEEEEEECCC----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCcCCCCCCceEEEEEEEeecCcccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHHHH
Confidence 568899999999999999 678899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCcccccccceeecccCCCCceEEEecCCCCccchhhhhhhhccccCcccccceeEEEE---Ee
Q psy2772 306 ISLPFKDQGRALLGYSHSSGREVSKSVVRHTKHMPSPAIVATTGSGPFLGYPKSDNIILPRKQHLFLDSVIWYIS---LL 382 (746)
Q Consensus 306 IIRrfKkrg~dl~~~~~~~L~~L~dkVAIhi~~fp~kvaIQiNDTHPsLaIPELmRIL~de~gl~wdeAv~wdIt---~a 382 (746)
|||+|++.+..+.. .+ ...|+.||++++||+|||||+|+||||||+|+|++|++|++| |+|+ |+
T Consensus 296 ilr~~~~~~~g~~~-------~~----~~~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A--~~i~~~~~v 362 (824)
T 2gj4_A 296 IIRRFKSSKFGCRD-------PV----RTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKA--WEVTVKTCA 362 (824)
T ss_dssp HHHHHHC----------------------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHH--HHHHHHHEE
T ss_pred HHHHHHHhcccccc-------cc----ccchhhcCCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHH--HHHhcCcEE
Confidence 99999876521000 00 012667799999999999999999999999999999999999 9998 99
Q ss_pred eeccccccccccccccccc
Q psy2772 383 EVYRLGGPLACGPWKVHAE 401 (746)
Q Consensus 383 YTNHTILpEALEkWpv~~~ 401 (746)
|||||++|||+|+||+++.
T Consensus 363 fT~HTl~~eglE~wp~~l~ 381 (824)
T 2gj4_A 363 YTNHTVLPEALERWPVHLL 381 (824)
T ss_dssp EECCCCCGGGSCEEEHHHH
T ss_pred EEeCCChHHHhhhchHHHH
Confidence 9999999999999999976
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=4e-44 Score=398.63 Aligned_cols=154 Identities=27% Similarity=0.434 Sum_probs=145.0
Q ss_pred cccccccCCcceeEEeec--cCCCCCCCCCCCChhHHHHHHHHHhccccceecccCCCCcccchhhhhhhhhhhhhhHHH
Q psy2772 228 KRHLVELEKQVSITFNLT--ERNEKIPLKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQV 305 (746)
Q Consensus 228 ~~~v~Gye~~~vNtLRLw--esseeFDLesFN~GdY~~Avd~r~~AEnITrVLYPDDSt~eGKeLRLKQQYFfVSASLQD 305 (746)
.+||+||+++++|+|||| ++.++||++.||.|||.+|++++..+|+||+||||+|++++||+||||||||||+|++|+
T Consensus 203 d~pi~Gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq~ 282 (796)
T 1l5w_A 203 DLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSVAD 282 (796)
T ss_dssp EEEEECSSSCCEEEEEEEEEECSSCCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCCCceEEEEEEEeccCcccChhhcCCccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 458899999999999999 567789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCcccccccceeecccCCCCceEEEecCCCCccchhhhhhhhccccCcccccceeEEEE---Ee
Q psy2772 306 ISLPFKDQGRALLGYSHSSGREVSKSVVRHTKHMPSPAIVATTGSGPFLGYPKSDNIILPRKQHLFLDSVIWYIS---LL 382 (746)
Q Consensus 306 IIRrfKkrg~dl~~~~~~~L~~L~dkVAIhi~~fp~kvaIQiNDTHPsLaIPELmRIL~de~gl~wdeAv~wdIt---~a 382 (746)
||++|++++.+ |+.||++++||+|||||+|+||||||+|+|++|++|++| |+|+ |+
T Consensus 283 ilr~~~~~~~~-------------------~~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A--~~i~~~~~v 341 (796)
T 1l5w_A 283 ILRRHHLAGRK-------------------LHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDA--WAITSKTFA 341 (796)
T ss_dssp HHHHHHHTTCC-------------------GGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHH--HHHHTTTEE
T ss_pred HHHHHHHcCCC-------------------hhhcCCccEEEecCCccHhHHHHHHHHHhhhcCCCHHHH--HHHhhccEE
Confidence 99999998854 444588999999999999999999999999999999999 9988 99
Q ss_pred eecccccccccccccccccc
Q psy2772 383 EVYRLGGPLACGPWKVHAEL 402 (746)
Q Consensus 383 YTNHTILpEALEkWpv~~~l 402 (746)
|||||++|||||+||+++..
T Consensus 342 yT~HTl~~egle~wp~~l~~ 361 (796)
T 1l5w_A 342 YTNHTLMPEALERWDVKLVK 361 (796)
T ss_dssp EECCCCSGGGSCEEEHHHHH
T ss_pred EEecCCcHhhhhcCCHHHHH
Confidence 99999999999999999863
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=7.8e-44 Score=396.30 Aligned_cols=155 Identities=22% Similarity=0.337 Sum_probs=145.5
Q ss_pred hcccccccCCcceeEEeec--cCCCCCCCCCCCChhHHHHHHHHHhccccceecccCCCCcccchhhhhhhhhhhhhhHH
Q psy2772 227 LKRHLVELEKQVSITFNLT--ERNEKIPLKFVNDGDYIQAVLDRNLAENISRVLYPNDNNFGGKELRLKQEYFMCAATLQ 304 (746)
Q Consensus 227 ~~~~v~Gye~~~vNtLRLw--esseeFDLesFN~GdY~~Avd~r~~AEnITrVLYPDDSt~eGKeLRLKQQYFfVSASLQ 304 (746)
..++|+||+++++|+|||| ++.+.|||+.||.|||.+|++++..+|+||+||||+|++++||+||||||||||+|++|
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~lq 271 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAEPWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASLQ 271 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEEESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCcCCCceEEEEEEecccccccchhhccCcchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHHH
Confidence 3468899999999999999 46778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCcccccccceeecccCCCCceEEEecCCCCccchhhhhhhhccccCcccccceeEEEE---E
Q psy2772 305 VISLPFKDQGRALLGYSHSSGREVSKSVVRHTKHMPSPAIVATTGSGPFLGYPKSDNIILPRKQHLFLDSVIWYIS---L 381 (746)
Q Consensus 305 DIIRrfKkrg~dl~~~~~~~L~~L~dkVAIhi~~fp~kvaIQiNDTHPsLaIPELmRIL~de~gl~wdeAv~wdIt---~ 381 (746)
+||++|++.+.+ |+.||++++||+|||||+|+||||||+|+|++|++|++| |+|+ |
T Consensus 272 ~ilr~~~~~~~~-------------------l~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A--~~i~~~~~ 330 (796)
T 2c4m_A 272 AMIQDHLAHHKD-------------------LSNFAEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEES--WAIVSKTF 330 (796)
T ss_dssp HHHHHHHHHSSC-------------------STTHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHH--HHHHHHHE
T ss_pred HHHHHHHHhCCC-------------------hhhcCCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHH--HHHhhccE
Confidence 999999988854 445588999999999999999999999999999999999 9988 9
Q ss_pred eeecccccccccccccccccc
Q psy2772 382 LEVYRLGGPLACGPWKVHAEL 402 (746)
Q Consensus 382 aYTNHTILpEALEkWpv~~~l 402 (746)
+|||||++|||||+||+++..
T Consensus 331 vyT~HTl~~egle~wp~~l~~ 351 (796)
T 2c4m_A 331 AYTNHTVLTEALEQWDEQIFQ 351 (796)
T ss_dssp EEECCCSSSTTSCEEEHHHHH
T ss_pred EEEecCchHHHhhhCCHHHHH
Confidence 999999999999999999863
No 5
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=96.55 E-value=0.03 Score=58.71 Aligned_cols=71 Identities=15% Similarity=0.148 Sum_probs=46.5
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccC
Q psy2772 505 ANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQQIRP 584 (746)
Q Consensus 505 EyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi~~ 584 (746)
..+.+|.++..+++..++.++ +...+++|..+++......+++..||.+.+-.++.+-..|.+++.-
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~ 583 (597)
T 3oja_B 517 RQAFKLRETQARRTEADAKQK-------------ETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNR 583 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred hhhhhHHHHHHHHHhhhhhhc-------------chhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444444555555555544443 3344678888888888888888888888888888888888888877
Q ss_pred CCcc
Q psy2772 585 GPTG 588 (746)
Q Consensus 585 ~~~~ 588 (746)
.|.+
T Consensus 584 ~~~~ 587 (597)
T 3oja_B 584 NPDT 587 (597)
T ss_dssp ----
T ss_pred CCcc
Confidence 6654
No 6
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.48 E-value=0.0018 Score=75.26 Aligned_cols=87 Identities=11% Similarity=0.161 Sum_probs=25.0
Q ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHH
Q psy2772 432 LHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLES 511 (746)
Q Consensus 432 ilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~ 511 (746)
.+.+++.++..|+++++.++..|.....++.... ...+++..+...|++++.....+|.....++++.-++..+||.
T Consensus 879 ~l~ele~~l~~Le~e~~~l~~~L~~e~~~l~~~e---~~l~~l~~~~~~Le~~l~ele~elee~ee~l~el~~e~~~le~ 955 (1184)
T 1i84_S 879 ELKELEQKHTQLCEEKNLLQEKLQAETELYAEAE---EMRVRLAAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQ 955 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444443333333221111 1223333344444444444444444444444444444455555
Q ss_pred HHHHHHHHHH
Q psy2772 512 ELVVLRQKLQ 521 (746)
Q Consensus 512 EV~~LRqkLQ 521 (746)
++..|+..+.
T Consensus 956 el~~L~~ele 965 (1184)
T 1i84_S 956 QMLDLEEQLE 965 (1184)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 5555554444
No 7
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=96.11 E-value=0.39 Score=43.00 Aligned_cols=28 Identities=21% Similarity=0.234 Sum_probs=11.7
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhHhh
Q psy2772 434 SRGRNICSVQGQAKEMLENALGSLRHKM 461 (746)
Q Consensus 434 qelE~kLq~Lk~DKD~LEsAL~~L~qqM 461 (746)
.+++..+..|+...+.++..+..+..++
T Consensus 23 ~~l~~~l~~l~~~~~~~~~~~~~~~~~~ 50 (284)
T 1c1g_A 23 DEAEADKKAAEDRSKQLEDELVSLQKKL 50 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444333
No 8
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.99 E-value=0.031 Score=65.24 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=44.3
Q ss_pred hhhhhhhhHHHHHHHHHHHhHhhhccC-CChHHHHHHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHhhhHHHHH
Q psy2772 439 ICSVQGQAKEMLENALGSLRHKMHGVH-ASPAEVERYRRQQRLLERELSRVRSI---LAHNSKKLEETVAANARLESELV 514 (746)
Q Consensus 439 kLq~Lk~DKD~LEsAL~~L~qqME~~~-dqPa~~EKi~~QQrlLE~eLsrVRae---LSrnSkELE~twaEyaRLE~EV~ 514 (746)
.++.|++.|.+||+-|..|.++++... .+-...+++......++.|....+.+ |...-+|++++-++-..||.|+.
T Consensus 915 ~~~~l~~~~~~LE~kl~eLq~rL~~~e~~n~~L~~~~~~~~~~~~~e~~~L~~~l~~le~~~~e~~~~~~~v~~L~~e~~ 994 (1080)
T 2dfs_A 915 SVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIA 994 (1080)
T ss_dssp ------------------------------------CHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677778888888888888776533 34444444444444455544444322 22234455555555666666666
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy2772 515 VLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQVKQLTE 573 (746)
Q Consensus 515 ~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~ 573 (746)
.|+..++........ ..+...+++ -+.|+.+..|+...+.|.+|++.|..
T Consensus 995 ~l~~~~~~~~ke~~~------lee~~~~~~---~~L~~kv~~L~~e~~~L~qq~~~l~~ 1044 (1080)
T 2dfs_A 995 KLRKELHQTQTEKKT------IEEWADKYK---HETEQLVSELKEQNTLLKTEKEELNR 1044 (1080)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH------HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666654431110 001111122 24456666666666666666666663
No 9
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=95.97 E-value=0.35 Score=43.32 Aligned_cols=12 Identities=8% Similarity=0.177 Sum_probs=4.4
Q ss_pred HHHhhhHHHHHH
Q psy2772 504 AANARLESELVV 515 (746)
Q Consensus 504 aEyaRLE~EV~~ 515 (746)
.+..+++.++..
T Consensus 76 ~~~~~~~~~~~~ 87 (284)
T 1c1g_A 76 KKATDAEADVAS 87 (284)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 10
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=95.56 E-value=0.049 Score=63.49 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy2772 472 ERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSR 524 (746)
Q Consensus 472 EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr 524 (746)
+++..|...|+.+|...+..++....+++..-.++.+|+.++..+...|.+..
T Consensus 888 ~~Le~e~~~l~~~L~~e~~~l~~~e~~l~~l~~~~~~Le~~l~ele~elee~e 940 (1184)
T 1i84_S 888 TQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARIEEEE 940 (1184)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555556666666666666666677777777777777777777665443
No 11
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=95.53 E-value=0.44 Score=46.75 Aligned_cols=95 Identities=13% Similarity=0.029 Sum_probs=71.4
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy2772 421 HAISRDQIASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLE 500 (746)
Q Consensus 421 ~klSr~ce~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE 500 (746)
-+|-.++..|.=+..++..+..|..+.+.|+..+..++.++.... .+++.+..+++-++.++..+++.+.+..++|.
T Consensus 8 ~~L~~LQ~lD~~i~~l~~~~~~lp~el~~le~~~~~l~~~~~~~~---~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~ 84 (256)
T 3na7_A 8 KQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLE---EEKLALKLQVSKNEQTLQDTNAKIASIQKKMS 84 (256)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667778877788888888888888888888888888887765 56788888999999999999988887776665
Q ss_pred HH--HHHHhhhHHHHHHHHH
Q psy2772 501 ET--VAANARLESELVVLRQ 518 (746)
Q Consensus 501 ~t--waEyaRLE~EV~~LRq 518 (746)
+. -.||.-|+.|+..++.
T Consensus 85 ~v~~~kE~~aL~kEie~~~~ 104 (256)
T 3na7_A 85 EIKSERELRSLNIEEDIAKE 104 (256)
T ss_dssp HCSSSSHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 42 2355555555555543
No 12
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.19 E-value=0.16 Score=59.53 Aligned_cols=83 Identities=11% Similarity=0.109 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHH
Q psy2772 468 PAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAEL 547 (746)
Q Consensus 468 Pa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekEL 547 (746)
-..+++...+-+.+++.+.....+++..-++++++-.|+..||....++++.||+...+ |++|.
T Consensus 969 l~~le~~~~e~~~~~~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~~~L~~kv~~----------------L~~e~ 1032 (1080)
T 2dfs_A 969 VERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSE----------------LKEQN 1032 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHH
Confidence 33444445555555666666666666777777777778888899888888888866643 66666
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2772 548 RRVQALVGDLQRQRQELSA 566 (746)
Q Consensus 548 wRIQdVvggLsrQRqeLs~ 566 (746)
..++.-+.+|....++.+.
T Consensus 1033 ~~L~qq~~~l~~~~~~~~~ 1051 (1080)
T 2dfs_A 1033 TLLKTEKEELNRRIHDQAK 1051 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6666666666655554444
No 13
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=94.67 E-value=1.3 Score=43.49 Aligned_cols=109 Identities=11% Similarity=0.203 Sum_probs=51.9
Q ss_pred hhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy2772 443 QGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQW 522 (746)
Q Consensus 443 Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQa 522 (746)
++.+-+.+..-+...+.+|...+ ++-..+.+.+.-..++++.....-+|-....++|..-.+.+.++..+..++..|.+
T Consensus 65 ~e~~i~~~~~ri~~~~~~l~~v~-~~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~ 143 (256)
T 3na7_A 65 NEQTLQDTNAKIASIQKKMSEIK-SERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALE 143 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCS-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333334443333 44444444444444444444444444444444444444444444444444444432
Q ss_pred HHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 523 SRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQV 568 (746)
Q Consensus 523 Qr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qV 568 (746)
- ++.+..++-.++.-...|..+|.+|...+
T Consensus 144 ~----------------~~~~~~~~~e~~~e~~~l~~~r~~l~~~i 173 (256)
T 3na7_A 144 L----------------ESLVENEVKNIKETQQIIFKKKEDLVEKT 173 (256)
T ss_dssp H----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred H----------------HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 2 23355555556666666777777776654
No 14
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=94.58 E-value=0.19 Score=52.67 Aligned_cols=30 Identities=13% Similarity=0.046 Sum_probs=18.3
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhHhhh
Q psy2772 433 HSRGRNICSVQGQAKEMLENALGSLRHKMH 462 (746)
Q Consensus 433 lqelE~kLq~Lk~DKD~LEsAL~~L~qqME 462 (746)
+.+++..++.|+++.+..|..+...+.+|+
T Consensus 458 ~~~~~~~i~~l~~~~~~~~~~l~~~~~~i~ 487 (597)
T 3oja_B 458 VNELRAEVQQLTNEQIQQEQLLQGLHAEID 487 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334556666666666666666666666644
No 15
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=93.61 E-value=0.95 Score=40.72 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=68.6
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q psy2772 423 ISRDQIASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEET 502 (746)
Q Consensus 423 lSr~ce~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~t 502 (746)
.+-..+..+-+|.++..|++|+.-|..||..|.-+.++.+. .++.+..+-..||.+|..+|.++++-..+.+.-
T Consensus 35 k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~------~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~L 108 (129)
T 3tnu_B 35 KHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGEL------ALKDARNKLAELEEALQKAKQDMARLLREYQEL 108 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34456677889999999999999999999999888776432 344455555668888988988888888887777
Q ss_pred HHHHhhhHHHHHHHHH
Q psy2772 503 VAANARLESELVVLRQ 518 (746)
Q Consensus 503 waEyaRLE~EV~~LRq 518 (746)
.+--.+||.|+.--|.
T Consensus 109 lnvKl~Ld~EIatYRk 124 (129)
T 3tnu_B 109 MNTKLALDVEIATYRK 124 (129)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777777765553
No 16
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=93.06 E-value=1.1 Score=40.48 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=65.9
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy2772 425 RDQIASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVA 504 (746)
Q Consensus 425 r~ce~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twa 504 (746)
-..+..+-+|.++..|++|+.-|..||..|.-+.++.+. .++.+..+-..||.+|..+|.++++-..+.+.-.+
T Consensus 39 Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~------~l~~~q~~i~~lE~eL~~~r~em~~ql~EYq~Ll~ 112 (131)
T 3tnu_A 39 EISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCM------QLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLD 112 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788999999999999999999999888776432 33444445556888888888888888887777777
Q ss_pred HHhhhHHHHHHHHH
Q psy2772 505 ANARLESELVVLRQ 518 (746)
Q Consensus 505 EyaRLE~EV~~LRq 518 (746)
--.+||.|+.--|.
T Consensus 113 vKl~Ld~EIatYRk 126 (131)
T 3tnu_A 113 VKTRLEQEIATYRR 126 (131)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777766554
No 17
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=90.64 E-value=3 Score=35.39 Aligned_cols=77 Identities=16% Similarity=0.286 Sum_probs=58.2
Q ss_pred hhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHH
Q psy2772 439 ICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQ 518 (746)
Q Consensus 439 kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRq 518 (746)
.|++|+.-|..||..|.-+.++.+. .++.+..+-..||.+|..+|.++++-..+...--+--.+||.|+..-|.
T Consensus 2 el~~l~~~~~sLE~~l~e~e~~~~~------~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIatYRk 75 (84)
T 1gk4_A 2 EVDALKGTNESLERQMREMEENFAV------EAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRK 75 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4788899999999999988877543 3444555556678888888888888888887777777788888877765
Q ss_pred HHH
Q psy2772 519 KLQ 521 (746)
Q Consensus 519 kLQ 521 (746)
=|.
T Consensus 76 LLE 78 (84)
T 1gk4_A 76 LLE 78 (84)
T ss_dssp HHT
T ss_pred HHc
Confidence 543
No 18
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=90.06 E-value=1.7 Score=42.15 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=60.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCC-hHHHHHHHH---HHHHHHHHHHHHHHHHHhhhHHHHHH
Q psy2772 427 QIASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHAS-PAEVERYRR---QQRLLERELSRVRSILAHNSKKLEET 502 (746)
Q Consensus 427 ce~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dq-Pa~~EKi~~---QQrlLE~eLsrVRaeLSrnSkELE~t 502 (746)
..++-.++|+.+++..|...|+.||.-+..|..++++-+.+ ....+.|+- .-..|+.||-+++.-++++..+.-+.
T Consensus 44 ~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L 123 (168)
T 3o0z_A 44 SQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEA 123 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567788899999999999999999999999999888855 445554443 34567777777777777776555444
Q ss_pred HHHHhhhH
Q psy2772 503 VAANARLE 510 (746)
Q Consensus 503 waEyaRLE 510 (746)
-....-||
T Consensus 124 ~Ekl~~lE 131 (168)
T 3o0z_A 124 QDMLNHSE 131 (168)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44333333
No 19
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=89.85 E-value=4.5 Score=32.74 Aligned_cols=79 Identities=10% Similarity=0.203 Sum_probs=59.1
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhHhh---hccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHH
Q psy2772 436 GRNICSVQGQAKEMLENALGSLRHKM---HGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESE 512 (746)
Q Consensus 436 lE~kLq~Lk~DKD~LEsAL~~L~qqM---E~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~E 512 (746)
++..-..+..-.+.|+..|..|++.+ ...|.-++ .+++..++..+...+.++...|...++.|.++-..|...|++
T Consensus 14 l~~~A~~~~~~~~~i~~~l~~L~~~v~~L~~~W~G~a-~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~~d~~ 92 (99)
T 3zbh_A 14 LRGVARQYNVESSNVTELIARLDQMSHTLQGIWEGAS-SEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSATILEDTDQQ 92 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555666666665553 34677664 477888888899999999999999999999999999999988
Q ss_pred HHH
Q psy2772 513 LVV 515 (746)
Q Consensus 513 V~~ 515 (746)
+..
T Consensus 93 ~a~ 95 (99)
T 3zbh_A 93 IAS 95 (99)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 20
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=89.63 E-value=3.2 Score=54.01 Aligned_cols=86 Identities=16% Similarity=0.211 Sum_probs=53.6
Q ss_pred HHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 488 VRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQ 567 (746)
Q Consensus 488 VRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~q 567 (746)
.-++|...-++|+++=++.+.||..|..|+.++++....... ...+....++=|.|.+.+++||..-|..=+.+
T Consensus 2019 ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~------L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~ 2092 (3245)
T 3vkg_A 2019 LENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQ------IKTESSKVKNKVDRSIALLDNLNSERGRWEQQ 2092 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHhhhhccccHHHH
Confidence 334444555566666666666777777777666654431000 01122223445677888999999999988888
Q ss_pred HHHHhhhccccc
Q psy2772 568 VKQLTEKSNSLS 579 (746)
Q Consensus 568 VrqLt~~s~~l~ 579 (746)
+.+|.++..+|.
T Consensus 2093 ~~~l~~~~~~L~ 2104 (3245)
T 3vkg_A 2093 SENFNTQMSTVV 2104 (3245)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc
Confidence 888887666653
No 21
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=89.55 E-value=2.2 Score=37.51 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=47.3
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHH
Q psy2772 436 GRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVV 515 (746)
Q Consensus 436 lE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~ 515 (746)
-|++|+.|+..+..||+.|..+..+... .++.+..+-..||.+|..+|+++++-..+-+...+--.+||.|+.-
T Consensus 10 ~~~~~~~Lq~~~~~LE~~l~e~E~~~~~------e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIat 83 (95)
T 3mov_A 10 RENLYFQGQKESRACLERIQELEDLLAK------EKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISA 83 (95)
T ss_dssp --------CCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999888775432 2222333334467777777777777766666666666677777766
Q ss_pred HHHHH
Q psy2772 516 LRQKL 520 (746)
Q Consensus 516 LRqkL 520 (746)
-|.-|
T Consensus 84 YrkLL 88 (95)
T 3mov_A 84 YRKLL 88 (95)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65444
No 22
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=88.90 E-value=1.8 Score=41.38 Aligned_cols=87 Identities=17% Similarity=0.168 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCC-------cchHHHHHHHHH
Q psy2772 477 QQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNG-------PSVAALEAELRR 549 (746)
Q Consensus 477 QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~-------qekAqLekELwR 549 (746)
+....+.++.+....|.+.-+.-..+=.+..++|+||+-|=..|=++-+.+-. +.- ....+|++.|.-
T Consensus 52 ~~~~~~~e~~~L~~~l~~E~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa-----~ar~~~~~~e~r~~~L~~ql~e 126 (154)
T 2ocy_A 52 ELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVA-----DARKEKYAIEILNKRLTEQLRE 126 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555555555555555555666778889999999998888776543211 011 122334566666
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2772 550 VQALVGDLQRQRQELSAQV 568 (746)
Q Consensus 550 IQdVvggLsrQRqeLs~qV 568 (746)
-+.++..|+.|=++|..-|
T Consensus 127 ~~~~l~~lq~ql~~LK~v~ 145 (154)
T 2ocy_A 127 KDTLLDTLTLQLKNLKKVM 145 (154)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6666666666666665444
No 23
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=88.17 E-value=4 Score=35.53 Aligned_cols=89 Identities=13% Similarity=0.139 Sum_probs=52.2
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCC----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhh
Q psy2772 433 HSRGRNICSVQGQAKEMLENALGSLRHKMHGVHAS----PAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANAR 508 (746)
Q Consensus 433 lqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dq----Pa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaR 508 (746)
|.....|++.|+.+||....-...+..++....+. -..+..+.+.-..||.+|-.+-..|...-.+||.+-.....
T Consensus 4 md~iKkKm~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~ 83 (101)
T 3u59_A 4 MEAIKKKMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATD 83 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456778888888887666555555554333211 12233344444456666666666666666666666655666
Q ss_pred hHHHHHHHHHHHH
Q psy2772 509 LESELVVLRQKLQ 521 (746)
Q Consensus 509 LE~EV~~LRqkLQ 521 (746)
-|.+|..|-..+|
T Consensus 84 AE~evasLnRriq 96 (101)
T 3u59_A 84 AEAEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666666655
No 24
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=87.95 E-value=4.1 Score=35.71 Aligned_cols=89 Identities=16% Similarity=0.138 Sum_probs=50.3
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCC----hHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhh
Q psy2772 433 HSRGRNICSVQGQAKEMLENALGSLRHKMHGVHAS----PAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANAR 508 (746)
Q Consensus 433 lqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dq----Pa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaR 508 (746)
|..+..|++.||.+||....=...+..++.....- =..+..+.+.-.+||.||-++-..|.....+||.+-.....
T Consensus 4 MdaIKkKm~~lk~e~e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~ 83 (101)
T 3u1c_A 4 MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAK 83 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788888888886665555554443332211 11222222233356666666666666666666666666666
Q ss_pred hHHHHHHHHHHHH
Q psy2772 509 LESELVVLRQKLQ 521 (746)
Q Consensus 509 LE~EV~~LRqkLQ 521 (746)
-|.+|..|-.++|
T Consensus 84 aE~ev~~L~Rriq 96 (101)
T 3u1c_A 84 AESEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6666666655555
No 25
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=86.99 E-value=3.2 Score=35.55 Aligned_cols=78 Identities=21% Similarity=0.212 Sum_probs=50.7
Q ss_pred hhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHH
Q psy2772 438 NICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLR 517 (746)
Q Consensus 438 ~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LR 517 (746)
..|.+||..+..||..|.-+.++... .++.+..+-..||.+|..+|+++++-..+...--+--.+||.|+..-|
T Consensus 3 ~eie~L~~q~~~Le~~l~e~E~~~~~------~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYR 76 (86)
T 1x8y_A 3 CQLSQLQCQLAAKEAKLRDLEDSLAR------ERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYR 76 (86)
T ss_dssp ---------CTTHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 35677788888888888877765432 445555566667888888888888888887777777778888888777
Q ss_pred HHHH
Q psy2772 518 QKLQ 521 (746)
Q Consensus 518 qkLQ 521 (746)
.-|.
T Consensus 77 kLLE 80 (86)
T 1x8y_A 77 KLLE 80 (86)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6554
No 26
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=86.91 E-value=5.6 Score=32.59 Aligned_cols=78 Identities=9% Similarity=0.135 Sum_probs=59.8
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHhHhh---hccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHH
Q psy2772 436 GRNICSVQGQAKEMLENALGSLRHKM---HGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESE 512 (746)
Q Consensus 436 lE~kLq~Lk~DKD~LEsAL~~L~qqM---E~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~E 512 (746)
++..-..++...+.|+..|..|.+.+ ...|.-+++ +++..++..+...+.++...|...++.|.++-..|...|++
T Consensus 13 l~~~A~~~~~~~~~i~~~l~~L~~~~~~l~~~W~G~a~-~aF~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~~~~~D~~ 91 (98)
T 3gwk_C 13 LRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTF-DSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDAD 91 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHBCSSTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCcHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555566666666666666653 346766655 77888888899999999999999999999999999999987
Q ss_pred HH
Q psy2772 513 LV 514 (746)
Q Consensus 513 V~ 514 (746)
+.
T Consensus 92 ~A 93 (98)
T 3gwk_C 92 IA 93 (98)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 27
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=85.16 E-value=5.6 Score=33.98 Aligned_cols=59 Identities=25% Similarity=0.397 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy2772 495 NSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVG----DLQRQRQELSA 566 (746)
Q Consensus 495 nSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvg----gLsrQRqeLs~ 566 (746)
.+.+|+.+=.+|..||..|.-|.+.|+.+.. +...++.||.++..++. +|+--|+.|+.
T Consensus 5 ~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~-------------~q~~~~~Elk~~~e~Ld~KI~eL~elrq~Lak 67 (72)
T 3cve_A 5 SHMKLQEVEIRNKDLEGQLSEMEQRLEKSQS-------------EQDAFRSNLKTLLEILDGKIFELTELRDNLAK 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5789999999999999999999999998874 34458889998888765 46666666654
No 28
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=84.98 E-value=16 Score=32.72 Aligned_cols=31 Identities=26% Similarity=0.327 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy2772 543 LEAELRRVQALVGDLQRQRQELSAQVKQLTE 573 (746)
Q Consensus 543 LekELwRIQdVvggLsrQRqeLs~qVrqLt~ 573 (746)
+|.|+-.+.-++.+.--.|-+|..+|..|++
T Consensus 67 ~E~di~~lrK~lD~~~l~r~dLE~~iesL~e 97 (119)
T 3ol1_A 67 AENTLQSFRQDVDNASLARLDLERKVESLQE 97 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcccHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555555555555554
No 29
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=84.18 E-value=6.4 Score=34.12 Aligned_cols=61 Identities=25% Similarity=0.371 Sum_probs=49.0
Q ss_pred HhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHH----HHHHHHHHHHH
Q psy2772 493 AHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVG----DLQRQRQELSA 566 (746)
Q Consensus 493 SrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvg----gLsrQRqeLs~ 566 (746)
..++.+|+.+=.+|..||.-|.-|.+.|++++. +...++.||.++..++. +|+--|+.|+.
T Consensus 9 e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~-------------~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLak 73 (79)
T 3cvf_A 9 EETQQKVQDLETRNAELEHQLRAMERSLEEARA-------------ERERARAEVGRAAQLLDVSLFELSELREGLAR 73 (79)
T ss_dssp -CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 346889999999999999999999999998875 34458889998888765 46777777664
No 30
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=83.97 E-value=28 Score=35.97 Aligned_cols=51 Identities=14% Similarity=-0.014 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 471 VERYRRQQRLLEREL----SRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 471 ~EKi~~QQrlLE~eL----srVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+.++..|++-++.++ .+.+++...-+.+.++-=.|++||+.++..+..++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (487)
T 3oja_A 412 LRAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALA 466 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhH
Confidence 445555444433333 333333333333333333444444444444444333
No 31
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=83.82 E-value=5 Score=35.14 Aligned_cols=45 Identities=24% Similarity=0.382 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy2772 478 QRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQW 522 (746)
Q Consensus 478 QrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQa 522 (746)
+..+++||++||..+=..-++|-++-..|.-|+.|+..||..|.+
T Consensus 26 KQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~ee 70 (81)
T 1wt6_A 26 RQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMEL 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999999999999987
No 32
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=83.46 E-value=32 Score=32.95 Aligned_cols=45 Identities=20% Similarity=0.132 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 477 QQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 477 QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+++.++.+..++..++....++|+++-..|..+..|++.+|++..
T Consensus 110 ~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~e~e~a~~~~~ 154 (301)
T 2efk_A 110 ERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCREAEKAAQTAE 154 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777888788888888888888877777777665
No 33
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=83.42 E-value=4.4 Score=45.13 Aligned_cols=29 Identities=21% Similarity=0.227 Sum_probs=26.3
Q ss_pred HHHHHHHHHh-hhHHHHHHHHHHHHHHHhh
Q psy2772 498 KLEETVAANA-RLESELVVLRQKLQWSRRE 526 (746)
Q Consensus 498 ELE~twaEya-RLE~EV~~LRqkLQaQr~~ 526 (746)
.++|+.+||+ -||+-+.-||.+++.|..+
T Consensus 103 dNdNtynE~S~ELRRrIqyLKekVdnQlsn 132 (562)
T 3ghg_A 103 NRDNTYNRVSEDLRSRIEVLKRKVIEKVQH 132 (562)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999 9999999999999988854
No 34
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=82.73 E-value=9.6 Score=37.39 Aligned_cols=136 Identities=20% Similarity=0.147 Sum_probs=64.4
Q ss_pred hhhhhhhhhhhhh-hhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHH-HHHHHHHHHHHHHHHHHHHHHHhhhHH
Q psy2772 421 HAISRDQIASKLH-SRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEV-ERYRRQQRLLERELSRVRSILAHNSKK 498 (746)
Q Consensus 421 ~klSr~ce~dKil-qelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~-EKi~~QQrlLE~eLsrVRaeLSrnSkE 498 (746)
.-|.-|++-+|-| .++|..|.++...--.|.+-+..|..+.+.+++--... .-...|+-.||.+|...|...-...+.
T Consensus 31 ~El~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ 110 (189)
T 2v71_A 31 DELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKY 110 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444433 34555555555555555555555555554444210000 111235778888888777776666554
Q ss_pred HHHHHHHHhhhHHHHHHHHHH---HHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 499 LEETVAANARLESELVVLRQK---LQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELS 565 (746)
Q Consensus 499 LE~twaEyaRLE~EV~~LRqk---LQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs 565 (746)
+-..=-.|+-||+..-++-.. ++.-+ |..- -..|.|+.||-.=+.+..-+||-|.|++
T Consensus 111 ireLEq~NDdlEr~~R~~~~SleD~e~kl-n~ai--------Er~alLE~El~EKe~l~~~~QRLkdE~r 171 (189)
T 2v71_A 111 VRELEQANDDLERAKRATIMSLEDFEQRL-NQAI--------ERNAFLESELDEKESLLVSVQRLKDEAR 171 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--------HHHHHHHHHHHHHHHHHCCC--------
T ss_pred HHHHHHHhhHHHHHHHHHHhhHHHHHHHH-HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444455555443333333 32222 1111 2567788888876666666666666553
No 35
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=82.31 E-value=7.5 Score=31.27 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=51.6
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhHhhh---ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHH
Q psy2772 437 RNICSVQGQAKEMLENALGSLRHKMH---GVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESEL 513 (746)
Q Consensus 437 E~kLq~Lk~DKD~LEsAL~~L~qqME---~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV 513 (746)
+..-..++.-.+.|+..|..|++.+. ..|.-++. +.+..++..+...+..+...|...++.|..+-..|..-|++.
T Consensus 12 ~~~A~~~~~~~~~l~~~l~~L~~~~~~L~~~W~G~a~-~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~a~~y~~~d~~~ 90 (97)
T 2vs0_A 12 RAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF-SRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQL 90 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555555555555555533 46655555 677778889999999999999999999999999999888765
Q ss_pred H
Q psy2772 514 V 514 (746)
Q Consensus 514 ~ 514 (746)
.
T Consensus 91 a 91 (97)
T 2vs0_A 91 S 91 (97)
T ss_dssp -
T ss_pred H
Confidence 3
No 36
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=81.44 E-value=17 Score=37.39 Aligned_cols=49 Identities=16% Similarity=0.242 Sum_probs=25.6
Q ss_pred HHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q psy2772 449 MLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSK 497 (746)
Q Consensus 449 ~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSk 497 (746)
..|.||..+..+|+..-+.-.+...++.=+++||++|.+++.-++++=|
T Consensus 370 t~eeal~~~~~~i~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 418 (471)
T 3mq9_A 370 TVDEALKDAQTRITAARDGLRAVMEARNVTHLLQQELTEAQKGFQDVEA 418 (471)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHhhhHHHHHH
Confidence 3444444444444433222222233444467778888777777766533
No 37
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=80.66 E-value=27 Score=34.26 Aligned_cols=77 Identities=23% Similarity=0.372 Sum_probs=49.0
Q ss_pred HHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 491 ILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQVKQ 570 (746)
Q Consensus 491 eLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qVrq 570 (746)
+|.+.-|..-..-..+.+|+.|+..+|.+++.+..... .+...|++||- .|...+..|...+|.
T Consensus 50 eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~---------~~~~~Lq~el~-------~l~~~~~~l~~~ire 113 (189)
T 2v71_A 50 QLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSY---------KQVSVLEDDLS-------QTRAIKEQLHKYVRE 113 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 45555555556667788999999999999987764311 24555666654 445556666666666
Q ss_pred Hhhhccccccccc
Q psy2772 571 LTEKSNSLSQQIR 583 (746)
Q Consensus 571 Lt~~s~~l~~qi~ 583 (746)
|-...+.|..+.|
T Consensus 114 LEq~NDdlEr~~R 126 (189)
T 2v71_A 114 LEQANDDLERAKR 126 (189)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHH
Confidence 6666655554433
No 38
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=79.23 E-value=17 Score=31.18 Aligned_cols=74 Identities=11% Similarity=0.114 Sum_probs=43.6
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCC---------ChHH-------HHHHHHHHHHHHHHHHHHHHHHHh
Q psy2772 431 KLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHA---------SPAE-------VERYRRQQRLLERELSRVRSILAH 494 (746)
Q Consensus 431 KilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~d---------qPa~-------~EKi~~QQrlLE~eLsrVRaeLSr 494 (746)
+-+.+++.+|..|+.++..|++-+..+...|..+.. +|-+ ++.+..+...|+.++..++.+++.
T Consensus 10 ~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~l~~~g~~CPvCgs~l~~~~~~~~i~~~~~~l~~l~~~i~~l~~~i~~ 89 (112)
T 1l8d_A 10 TKKTTIEEERNEITQRIGELKNKIGDLKTAIEELKKAKGKCPVCGRELTDEHREELLSKYHLDLNNSKNTLAKLIDRKSE 89 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSEECTTTCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677778888888888888888888888776654 2222 334444444555555554444444
Q ss_pred hhHHHHHHHH
Q psy2772 495 NSKKLEETVA 504 (746)
Q Consensus 495 nSkELE~twa 504 (746)
..++++..-.
T Consensus 90 l~~~~~~l~~ 99 (112)
T 1l8d_A 90 LERELRRIDM 99 (112)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444433333
No 39
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=78.83 E-value=4.6 Score=36.32 Aligned_cols=65 Identities=26% Similarity=0.279 Sum_probs=42.3
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHH---------HhHhhhccCCChHHHH--HHHHHHHHHHHHHHHHHHHHH
Q psy2772 429 ASKLHSRGRNICSVQGQAKEMLENALGS---------LRHKMHGVHASPAEVE--RYRRQQRLLERELSRVRSILA 493 (746)
Q Consensus 429 ~dKilqelE~kLq~Lk~DKD~LEsAL~~---------L~qqME~~~dqPa~~E--Ki~~QQrlLE~eLsrVRaeLS 493 (746)
..+-+..|+.....|+++|+.||.=|+. ...++-++..||+... .....+..||.|.-+.|..+.
T Consensus 17 lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd~~~~~TKVlH~~~NPa~~a~~~~~~~~e~Lq~E~erLr~~v~ 92 (100)
T 1go4_E 17 LRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSVARQRLREDHSQLQAECERLRGLLR 92 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCCCTTTEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccCeeeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777888888888888887765 2345667788998765 444445555555555554443
No 40
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=78.83 E-value=12 Score=35.74 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHH
Q psy2772 478 QRLLERELSRVRSILAH----------NSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAEL 547 (746)
Q Consensus 478 QrlLE~eLsrVRaeLSr----------nSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekEL 547 (746)
|-.|+.+|.+.|.+|.. ...++.+.+.+.+-.+.++..|...|.+.+..+.. .-+.+..++.||
T Consensus 15 qs~LeD~L~~~R~el~~~~~ri~~lE~~r~~~~~l~~~~~~~~~e~~~L~~~l~~E~~~R~~------aE~~~~~ie~El 88 (154)
T 2ocy_A 15 QSHLEEQLNKSLKTIASQKAAIENYNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTK------AEEEADKLNKEV 88 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH------HHTHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHH
Confidence 45566777777776652 22344444445555566666677777655543222 123444555554
Q ss_pred HHH--------HHHHHHHHHHHHHHHHHHHHHhh
Q psy2772 548 RRV--------QALVGDLQRQRQELSAQVKQLTE 573 (746)
Q Consensus 548 wRI--------QdVvggLsrQRqeLs~qVrqLt~ 573 (746)
--. --.|++=.+.|..+-..+++|..
T Consensus 89 EeLTasLFeEAN~MVa~ar~~~~~~e~r~~~L~~ 122 (154)
T 2ocy_A 89 EDLTASLFDEANNMVADARKEKYAIEILNKRLTE 122 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221 12334445666666666666653
No 41
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=77.02 E-value=19 Score=38.61 Aligned_cols=96 Identities=8% Similarity=0.147 Sum_probs=56.0
Q ss_pred hhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh
Q psy2772 429 ASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHAS-PAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANA 507 (746)
Q Consensus 429 ~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dq-Pa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEya 507 (746)
.||=|++||..|+.|..-+...+..+..+..-......+ |...+.+-+.-+.+.+++.+.-+.+....+.++..-..+.
T Consensus 36 V~~~l~~LE~~l~elsn~ts~v~~Lvk~iq~~~~~~Q~~~~d~~e~~tq~skkml~~~~~~e~~~~~~~~~i~~l~~~~~ 115 (409)
T 1m1j_C 36 TDGELLEIEGLLQQATNSTGSIEYLIQHIKTIYPSEKQTLPQSIEQLTQKSKKIIEEIIRYENTILAHENTIQQLTDMHI 115 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSTTCCSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 566777777777776666665555444444443332212 3334444444445666677776666666666555555555
Q ss_pred hhHHHHHHHHHHHHHHH
Q psy2772 508 RLESELVVLRQKLQWSR 524 (746)
Q Consensus 508 RLE~EV~~LRqkLQaQr 524 (746)
.++..+..|++++-..+
T Consensus 116 ~~~~~i~~l~~~i~~l~ 132 (409)
T 1m1j_C 116 MNSNKITQLKQKIAQLE 132 (409)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 66677777777766554
No 42
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=76.31 E-value=1.9 Score=40.48 Aligned_cols=47 Identities=17% Similarity=0.158 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhh
Q psy2772 480 LLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRRE 526 (746)
Q Consensus 480 lLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~ 526 (746)
..+.++.+....|.+.-+.-..+=.+..+||+||+-|=..|=++-+.
T Consensus 43 ~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElE~LTasLFeEAN~ 89 (135)
T 2e7s_A 43 DRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEANN 89 (135)
T ss_dssp THHHHHHTHHHHHHHTTSHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555566667778888999999888888776543
No 43
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=74.69 E-value=31 Score=27.66 Aligned_cols=74 Identities=14% Similarity=0.114 Sum_probs=55.4
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhHhhhcc---CCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhh
Q psy2772 435 RGRNICSVQGQAKEMLENALGSLRHKMHGV---HASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARL 509 (746)
Q Consensus 435 elE~kLq~Lk~DKD~LEsAL~~L~qqME~~---~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRL 509 (746)
+++..-..++.-.+.|+..|..|++++..- |. =.+.+++..+...+...+.++...|...++.|.++-..|..-
T Consensus 13 ~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L~~~W~-G~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~~A~~~~~~ 89 (93)
T 4ioe_A 13 ELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWA-GATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIADKFRNT 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455556667777778888888888876554 43 457778888888888888888888888888888887776543
No 44
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=73.99 E-value=12 Score=33.76 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 472 ERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 472 EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+++..+...|+..|.-+...|...-.......++..+||.++.-|+..|.
T Consensus 72 ~~L~~~k~eLe~~l~el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~le 121 (129)
T 2fxo_A 72 DQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDID 121 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556655555555555555555556666666666666666655
No 45
>3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B
Probab=73.71 E-value=33 Score=33.18 Aligned_cols=102 Identities=10% Similarity=0.218 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhc----------cCC-------CCCCCCcchHHHH
Q psy2772 482 ERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVC----------NGT-------ASLSNGPSVAALE 544 (746)
Q Consensus 482 E~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~----------~~~-------~~~~~~qekAqLe 544 (746)
-..|.-+|.+.-.-|++-...+++|.|+=+||..-|+++.|-.+... -.. ..-+.+.+..-|.
T Consensus 16 ~~~L~e~h~qy~~ks~~yd~l~e~y~r~sqEiq~Kr~AieAF~E~ik~FeeQ~~~qer~~~~~~~~f~~e~~~~E~~~l~ 95 (170)
T 3l4q_C 16 GAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKSSKEYLERFRREGNEKEMQRIL 95 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTGGGSSSSSCCCSSSTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCHHHHHHHH
Confidence 34466778888888999999999999999999999999987443210 000 0011234444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Q psy2772 545 AELRRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQQIR 583 (746)
Q Consensus 545 kELwRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi~ 583 (746)
.=..+++.-++.|...++.|...+++.....-.|..+|.
T Consensus 96 ~N~e~LksRL~~l~~sk~~L~e~L~~q~~~~relERemn 134 (170)
T 3l4q_C 96 LNSERLKSRIAEIHESRTKLEQELRAQASDNREIDKRMN 134 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555577778888888888888888888776666655543
No 46
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=73.65 E-value=8.6 Score=32.27 Aligned_cols=31 Identities=6% Similarity=-0.081 Sum_probs=22.5
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhHhhhcc
Q psy2772 434 SRGRNICSVQGQAKEMLENALGSLRHKMHGV 464 (746)
Q Consensus 434 qelE~kLq~Lk~DKD~LEsAL~~L~qqME~~ 464 (746)
..+..|+++|+.|+|....-+..+..++...
T Consensus 2 ~~ikkKm~~lk~e~d~a~~~~~~~e~~l~~~ 32 (81)
T 1ic2_A 2 DAIKKKMQMLKLDKENALDRAEQAEADKKAA 32 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466789999999988777666666665543
No 47
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=73.40 E-value=11 Score=34.54 Aligned_cols=65 Identities=9% Similarity=0.044 Sum_probs=47.5
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 428 IASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSIL 492 (746)
Q Consensus 428 e~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeL 492 (746)
|.+.+-.+|+..|+.++.+-+.|+++......--.+|+=.+.++.+=+.-=..++.++..++.+|
T Consensus 64 E~~~~~~EL~~~l~sie~dLeDLe~sI~ivE~np~kF~l~~~Ei~~Rr~fV~~~r~~I~~mk~~l 128 (130)
T 4dnd_A 64 ELDWTTNELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHM 128 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56777889999999999999999999999987788888777766653333334444444444443
No 48
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=73.07 E-value=40 Score=30.22 Aligned_cols=44 Identities=20% Similarity=0.215 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy2772 479 RLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQW 522 (746)
Q Consensus 479 rlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQa 522 (746)
--|+-++-+.+..+-..-.|.|+-.+.-..+|+++..||..+.+
T Consensus 37 a~l~leldn~~~~~edfk~KyE~E~~~r~~~E~di~~lrK~lD~ 80 (119)
T 3ol1_A 37 ARVEVERDNLAEDIMRLREKLQEEMLQREEAENTLQSFRQDVDN 80 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhcccH
Confidence 33444444555555555555666566666677888888877764
No 49
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=72.45 E-value=33 Score=30.71 Aligned_cols=41 Identities=12% Similarity=0.234 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy2772 483 RELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWS 523 (746)
Q Consensus 483 ~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQ 523 (746)
.|+...|..|.....||+..=+-++.||..+..+.+....+
T Consensus 36 ~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~ 76 (129)
T 3tnu_B 36 HEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELA 76 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444554444444444333
No 50
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=70.80 E-value=26 Score=36.19 Aligned_cols=52 Identities=13% Similarity=0.188 Sum_probs=28.6
Q ss_pred HHHHHhHh----hhccCCChHH--------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy2772 453 ALGSLRHK----MHGVHASPAE--------VERYRRQQRLLERELSRVRSILAHNSKKLEETVA 504 (746)
Q Consensus 453 AL~~L~qq----ME~~~dqPa~--------~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twa 504 (746)
+|+.+||+ +..|-..|.. ..+..+++..||+++..+|.+....-.+|.+.|.
T Consensus 332 ~L~~i~HrNLV~L~gyC~s~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~~~~~~~~~ 395 (487)
T 3oja_A 332 RENQARQREIDALKEQYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVG 395 (487)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhcccccchhhHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHhhc
Confidence 56666776 4445444332 2234455566777777777666555555544443
No 51
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=70.74 E-value=27 Score=31.83 Aligned_cols=65 Identities=26% Similarity=0.411 Sum_probs=45.8
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Q psy2772 503 VAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQQI 582 (746)
Q Consensus 503 waEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi 582 (746)
-..+.||+.||+.+|.|++.+...+. .+...||+||-. |...+.+|...+|.|-..++.|..+-
T Consensus 9 ~~~~~~L~~E~e~~k~K~~~~~~e~~---------~~~~~Lq~El~~-------lr~~~~~l~~~iReLEq~NDDLER~~ 72 (111)
T 2v66_B 9 QADNQRLKYEVEALKEKLEHQYAQSY---------KQVSVLEDDLSQ-------TRAIKEQLHKYVRELEQANDDLERAK 72 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 45688999999999999998764321 245556666654 66677777777777777777666444
Q ss_pred c
Q psy2772 583 R 583 (746)
Q Consensus 583 ~ 583 (746)
|
T Consensus 73 R 73 (111)
T 2v66_B 73 R 73 (111)
T ss_dssp H
T ss_pred H
Confidence 3
No 52
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=70.29 E-value=27 Score=37.43 Aligned_cols=43 Identities=12% Similarity=0.132 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy2772 472 ERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRR 525 (746)
Q Consensus 472 EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~ 525 (746)
+.+.+||+.+..+| .+||+++.+.+.+=.++..|++.+|....
T Consensus 27 d~L~k~e~~V~~~l-----------~~LE~~l~elsn~ts~v~~Lvk~iq~~~~ 69 (409)
T 1m1j_C 27 DFFNKYRLTTDGEL-----------LEIEGLLQQATNSTGSIEYLIQHIKTIYP 69 (409)
T ss_dssp HHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhcchhHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34555666666555 46778888888888889999999998753
No 53
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=69.94 E-value=12 Score=34.29 Aligned_cols=82 Identities=10% Similarity=0.051 Sum_probs=58.7
Q ss_pred cceeeecchhhhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHH---HHHhHhhhccCCC----hHHHHHHHHHHHHHHH
Q psy2772 411 PIRIRIGVMIHAISRDQIASKLHSRGRNICSVQGQAKEMLENAL---GSLRHKMHGVHAS----PAEVERYRRQQRLLER 483 (746)
Q Consensus 411 p~ri~e~d~d~klSr~ce~dKilqelE~kLq~Lk~DKD~LEsAL---~~L~qqME~~~dq----Pa~~EKi~~QQrlLE~ 483 (746)
..++..+.+|-=..++..+.+.|.+-...|..|+++..+++..| .+|++|++-|+++ +++-||+..-...|+.
T Consensus 18 ~~~~~~~ei~~L~~~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ 97 (110)
T 2v4h_A 18 GSHMASMQLEDLRQQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQE 97 (110)
T ss_dssp TCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHH
Confidence 45666666777777788888888888888888998888888854 4788888887765 5556666665666666
Q ss_pred HHHHHHHHH
Q psy2772 484 ELSRVRSIL 492 (746)
Q Consensus 484 eLsrVRaeL 492 (746)
+|.....++
T Consensus 98 ql~~Lq~q~ 106 (110)
T 2v4h_A 98 QLEQLQREF 106 (110)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655544443
No 54
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=69.04 E-value=26 Score=30.12 Aligned_cols=68 Identities=26% Similarity=0.274 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhhHHHHHHH-------HHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 498 KLEETVAANARLESELVVL-------RQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQVKQ 570 (746)
Q Consensus 498 ELE~twaEyaRLE~EV~~L-------RqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qVrq 570 (746)
+++.+..+++||+-++.-+ |.+...... -....|.|+-.+..+|.++--.|-+|..+|..
T Consensus 8 qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~-------------~R~~~E~d~~~LrkdvD~a~l~r~dLE~kves 74 (86)
T 3swk_A 8 QVDQLTNDKARVEVERDNLAEDIMRLREKLQEEML-------------QREEAENTLQSFRQDVDNASLARLDLERKVES 74 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 4555566666666665555 444444432 34458899999999999999999999999999
Q ss_pred Hhhhcccc
Q psy2772 571 LTEKSNSL 578 (746)
Q Consensus 571 Lt~~s~~l 578 (746)
|++--.-|
T Consensus 75 L~eEl~fL 82 (86)
T 3swk_A 75 LQEEIAFL 82 (86)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98765443
No 55
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=68.81 E-value=23 Score=30.04 Aligned_cols=76 Identities=18% Similarity=0.259 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHH
Q psy2772 470 EVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRR 549 (746)
Q Consensus 470 ~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwR 549 (746)
+++.++-|...||+.|..+.... ..+|+..-...+.||.++..+|+.++.|+..-.. --..|..|+.|+--
T Consensus 2 el~~l~~~~~sLE~~l~e~e~~~---~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~------LlnvK~~Ld~EIat 72 (84)
T 1gk4_A 2 EVDALKGTNESLERQMREMEENF---AVEAANYQDTIGRLQDEIQNMKEEMARHLREYQD------LLNVKMALDIEIAT 72 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHhhHHHHHH
Confidence 56778888899999888776655 4567777788888999999999999987643211 11256667777654
Q ss_pred HHHHH
Q psy2772 550 VQALV 554 (746)
Q Consensus 550 IQdVv 554 (746)
-.-++
T Consensus 73 YRkLL 77 (84)
T 1gk4_A 73 YRKLL 77 (84)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 43333
No 56
>3fav_A ESAT-6-like protein ESXB; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_A
Probab=67.25 E-value=46 Score=27.50 Aligned_cols=73 Identities=10% Similarity=0.071 Sum_probs=50.9
Q ss_pred hhhhhhHHHHHHHHHHHhHhh---hccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHH
Q psy2772 441 SVQGQAKEMLENALGSLRHKM---HGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELV 514 (746)
Q Consensus 441 q~Lk~DKD~LEsAL~~L~qqM---E~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~ 514 (746)
..+..-...|+..|..|+..+ ...| .=.+.+.+..++.........++..|...+..|..+-..|..-|++..
T Consensus 17 ~~~~~~~~~l~~~l~~l~~~~~~L~~~W-~G~A~~af~~~~~~w~~~~~~l~~~L~~i~~~l~~~a~~y~~~d~~~a 92 (101)
T 3fav_A 17 GNFERISGDLKTQIDQVESTAGSLQGQW-RGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQ 92 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666666666554 4445 355678999999999999999999999999999999999999888654
No 57
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=66.95 E-value=30 Score=31.12 Aligned_cols=37 Identities=22% Similarity=0.343 Sum_probs=14.5
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHH
Q psy2772 484 ELSRVRSILAHNSKKLEETVAANARLESELVVLRQKL 520 (746)
Q Consensus 484 eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkL 520 (746)
|+...|..|.....+++..=+-++.||..+.-+.+..
T Consensus 39 Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~ 75 (131)
T 3tnu_A 39 EISELRRTMQNLEIELQSQLSMKASLENSLEETKGRY 75 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444443333
No 58
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=66.43 E-value=38 Score=37.53 Aligned_cols=20 Identities=15% Similarity=0.400 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q psy2772 555 GDLQRQRQELSAQVKQLTEK 574 (746)
Q Consensus 555 ggLsrQRqeLs~qVrqLt~~ 574 (746)
+|.+..-..|.+++.+|..+
T Consensus 563 ~g~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 563 EGFQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 44455555555555555444
No 59
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=66.39 E-value=74 Score=28.58 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHHHHhhhHHHHHHHHHHHHHHH
Q psy2772 471 VERYRRQQRLLERELSRVRSILAHNSKKLE-------ETVAANARLESELVVLRQKLQWSR 524 (746)
Q Consensus 471 ~EKi~~QQrlLE~eLsrVRaeLSrnSkELE-------~twaEyaRLE~EV~~LRqkLQaQr 524 (746)
.++++.|-+.|+.++..+..++.+...+|+ .+=.+..+||+||+-|=..|=++-
T Consensus 7 ~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie~ElEeLTasLFeEA 67 (97)
T 2eqb_B 7 YNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLNKEVEDLTASLFDEA 67 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555666666655555555554444 445566677777776666665553
No 60
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=65.36 E-value=5.1 Score=29.71 Aligned_cols=27 Identities=30% Similarity=0.350 Sum_probs=22.7
Q ss_pred HHHhhhHHHHHHHHHHhhhHHHHHHHH
Q psy2772 491 ILAHNSKKLEETVAANARLESELVVLR 517 (746)
Q Consensus 491 eLSrnSkELE~twaEyaRLE~EV~~LR 517 (746)
+.++.-||..++-+||-.||+||.+|.
T Consensus 2 evaqlekevaqaeaenyqleqevaqle 28 (33)
T 1fmh_A 2 EVAQLEKEVAQAEAENYQLEQEVAQLE 28 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 356677888899999999999998874
No 61
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=65.24 E-value=39 Score=29.40 Aligned_cols=65 Identities=20% Similarity=0.326 Sum_probs=36.4
Q ss_pred hhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHH
Q psy2772 438 NICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLR 517 (746)
Q Consensus 438 ~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LR 517 (746)
+|++.|.+.--.||.=+..++++ .|..+. ..-|.++...| +.++.+..+++|||-|+.-|.
T Consensus 23 dKVR~LEqqN~~Le~~i~~l~~~------~~~~~~------~~ye~~i~~Lr-------~~i~~~~~ek~~l~~e~dnl~ 83 (93)
T 3s4r_A 23 DKVRFLEQQNKILLAELEQLKGQ------GKSRLG------DLYEEEMRELR-------RQVDQLTNDKARVEVERDNLA 83 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------HHHHHH------HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc------cCCCcH------HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 46777777777777666555443 111111 22345555555 455666677777777666655
Q ss_pred HHHH
Q psy2772 518 QKLQ 521 (746)
Q Consensus 518 qkLQ 521 (746)
..+.
T Consensus 84 ~~~~ 87 (93)
T 3s4r_A 84 EDIM 87 (93)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 62
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=64.56 E-value=16 Score=31.22 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHH
Q psy2772 470 EVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRR 549 (746)
Q Consensus 470 ~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwR 549 (746)
.++.+.-|...||+-|.-+-. +...+|++.=...+.||.++..+|+.++.|+..-.. --..|..|+.|+--
T Consensus 4 eie~L~~q~~~Le~~l~e~E~---~~~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~------LlnvK~~Le~EIat 74 (86)
T 1x8y_A 4 QLSQLQCQLAAKEAKLRDLED---SLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQE------LLDIKLALDMEIHA 74 (86)
T ss_dssp --------CTTHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHhhHHHHHH
Confidence 345555566667776666655 445677777777788899999999999877643211 11256677777755
Q ss_pred HHHHHHH
Q psy2772 550 VQALVGD 556 (746)
Q Consensus 550 IQdVvgg 556 (746)
-..+++|
T Consensus 75 YRkLLEG 81 (86)
T 1x8y_A 75 YRKLLEG 81 (86)
T ss_dssp HHHHHHH
T ss_pred HHHHHcC
Confidence 5555443
No 63
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=63.64 E-value=1e+02 Score=29.30 Aligned_cols=103 Identities=14% Similarity=0.225 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHH
Q psy2772 470 EVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRR 549 (746)
Q Consensus 470 ~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwR 549 (746)
..+.|..+-..|...-..++.....--+.|+++.. +-.+..++..+-.=|.+......+ .+.+..-...+.-|.+
T Consensus 182 ~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~-~~qf~~~~~~~~~Wl~~~e~~l~~----~~~g~~~~~~~~ll~~ 256 (322)
T 1u4q_A 182 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKMTLVAS----EDYGDTLAAIQGLLKK 256 (322)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC----CCCTTSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC----CCCCCCHHHHHHHHHH
Confidence 46778888888888888888888888888888876 455556666655555554433222 1334444456667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q psy2772 550 VQALVGDLQRQRQELSAQVKQLTEKSNSLSQQ 581 (746)
Q Consensus 550 IQdVvggLsrQRqeLs~qVrqLt~~s~~l~~q 581 (746)
.+.+...+...+ ..|.+|.+....|...
T Consensus 257 h~~~~~el~~~~----~~v~~l~~~~~~L~~~ 284 (322)
T 1u4q_A 257 HEAFETDFTVHK----DRVNDVCANGEDLIKK 284 (322)
T ss_dssp HHHHHHHHHHHH----HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHhc
Confidence 777777776655 3445555555555443
No 64
>3fav_B ESAT-6, 6 kDa early secretory antigenic target; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_B
Probab=63.62 E-value=16 Score=29.63 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=45.5
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHH
Q psy2772 434 SRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESEL 513 (746)
Q Consensus 434 qelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV 513 (746)
.++......|...-+.|++.+..|... +. -.+.+.+..++..+......++..|...+..|.++-..|..-|+..
T Consensus 15 ~~~~~~~~~i~~~l~~l~~~v~~l~~~----W~-G~A~~af~~~~~~w~~~~~~~~~~L~~i~~~l~~~~~~y~~~d~~~ 89 (94)
T 3fav_B 15 SAIQGNVTSIHSLLDEGKQSLTKLAAA----WG-GSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNV 89 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGG----GT-CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc----cC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444455555444333 32 2366788888999999999999999999999999999998887754
No 65
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=61.91 E-value=1.1e+02 Score=29.09 Aligned_cols=47 Identities=13% Similarity=0.055 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 475 RRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 475 ~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
...++.+++++.++...+....++|+++-..|..+-.|++.++++++
T Consensus 115 ~~~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~~~~ 161 (305)
T 2efl_A 115 KQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFE 161 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777777777777777788888888887777777777665
No 66
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=61.68 E-value=50 Score=33.96 Aligned_cols=80 Identities=18% Similarity=0.162 Sum_probs=40.5
Q ss_pred hhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHHHHHHHHHhhh
Q psy2772 441 SVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHN-----------SKKLEETVAANARL 509 (746)
Q Consensus 441 q~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrn-----------SkELE~twaEyaRL 509 (746)
++|++-.+.++.+|...+.++|-. .-..-+.+|-.-+|.-|..+|++-+-. -||.-+.-.....|
T Consensus 373 eal~~~~~~i~~~l~~~~~~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (471)
T 3mq9_A 373 EALKDAQTRITAARDGLRAVMEAR----NVTHLLQQELTEAQKGFQDVEAQAATANHTVMALMASLDAEKAQGQKKVEEL 448 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHhh----hHHHHHHHHHHHHhhhHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555556666666666555433 223334444455666666666554321 12222222344456
Q ss_pred HHHHHHHHHHHHHHH
Q psy2772 510 ESELVVLRQKLQWSR 524 (746)
Q Consensus 510 E~EV~~LRqkLQaQr 524 (746)
|.|+.-|-++|+.++
T Consensus 449 ~~~~~~~~~~~~~~~ 463 (471)
T 3mq9_A 449 EGEITTLNHKLQDAS 463 (471)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666666666544
No 67
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=61.19 E-value=50 Score=30.46 Aligned_cols=28 Identities=32% Similarity=0.319 Sum_probs=21.4
Q ss_pred hHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy2772 496 SKKLEETVAANARLESELVVLRQKLQWS 523 (746)
Q Consensus 496 SkELE~twaEyaRLE~EV~~LRqkLQaQ 523 (746)
|--||+.=.|+.+.|+.|..-||||+.-
T Consensus 21 ~~~ieeLq~Ei~~~E~QL~~ArQKLkdA 48 (113)
T 4fi5_A 21 SMTMEELQREINAHEGQLVIARQKVRDA 48 (113)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446666678888899999999998844
No 68
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=60.19 E-value=44 Score=34.64 Aligned_cols=85 Identities=18% Similarity=0.144 Sum_probs=47.6
Q ss_pred HHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 488 VRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQ 567 (746)
Q Consensus 488 VRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~q 567 (746)
++..|++...+|+++-.+-..-+++|+.|+..++..+.+.... ........+-.|+.++.-|+.+ .-++.-|..|
T Consensus 307 lq~~L~~~~~~l~~~~~~~~~k~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~----~~~~~~~~~q 381 (406)
T 4dyl_A 307 VQHTLTSVTDELAVATEMVFRRQEMVTQLQQELRNEEENTHPR-ERVQLLGKRQVLQEALQGLQVA----LCSQAKLQAQ 381 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTT-CGGGGHHHHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc-hHHHHHhHHhhHHHHHHHHHHH----HhHHHHHHHH
Confidence 3344555556666677777778899999999999776532221 0011112344455555555543 3445555556
Q ss_pred HHHHhhhccc
Q psy2772 568 VKQLTEKSNS 577 (746)
Q Consensus 568 VrqLt~~s~~ 577 (746)
+.-|..+-+.
T Consensus 382 ~~~~~~~~~~ 391 (406)
T 4dyl_A 382 QELLQTKLEH 391 (406)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 5555555433
No 69
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=59.72 E-value=97 Score=32.78 Aligned_cols=45 Identities=13% Similarity=0.045 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy2772 478 QRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQW 522 (746)
Q Consensus 478 QrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQa 522 (746)
.+.++.+..++...+....++|+++...|.+.-.|...++++++.
T Consensus 131 rK~~~~~~~k~qk~l~~~~~~l~KaKk~Y~~~cke~e~a~~~~~~ 175 (486)
T 3haj_A 131 TKEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREAN 175 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777788888888888888888887777777666553
No 70
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=59.38 E-value=78 Score=28.87 Aligned_cols=41 Identities=29% Similarity=0.288 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHH
Q psy2772 474 YRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELV 514 (746)
Q Consensus 474 i~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~ 514 (746)
+.+.=+.|||.--.+..-|.-.-.+|..|...|+-||.||.
T Consensus 61 LEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~ 101 (111)
T 2v66_B 61 LEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELD 101 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555555555666666666666666655
No 71
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=59.14 E-value=85 Score=26.83 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=28.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy2772 539 SVAALEAELRRVQALVGDLQRQRQELSAQVKQLTEK 574 (746)
Q Consensus 539 ekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~~ 574 (746)
++..|+..+--+++-+..|..++++|..++.-|+++
T Consensus 50 ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~~r 85 (89)
T 3bas_A 50 QKNDLFGSMKQLEDKVEELLSKNYHLENEVARLKKL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334443337788999999999999999999988765
No 72
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=59.13 E-value=64 Score=42.60 Aligned_cols=22 Identities=9% Similarity=-0.020 Sum_probs=14.0
Q ss_pred CCceEEEecCCCCcc-chhhhhh
Q psy2772 340 PSPAIVATTGSGPFL-GYPKSDN 361 (746)
Q Consensus 340 p~kvaIQiNDTHPsL-aIPELmR 361 (746)
.+++++.++|+|=.- +++|.|.
T Consensus 1703 ~~~~vFL~tD~qi~~e~FLE~IN 1725 (3245)
T 3vkg_A 1703 EEKICFIFDESNVLESSFLERMN 1725 (3245)
T ss_dssp CCCEEEEEEGGGCSSTHHHHHHH
T ss_pred CCCEEEEEeccccccHHHHHHHH
Confidence 567889999987321 3445444
No 73
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=58.51 E-value=11 Score=28.49 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=25.3
Q ss_pred HHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 492 LAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 492 LSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+++.-.|.|+...+|.-||+||.-||.-|.
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 345567899999999999999999998775
No 74
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=57.40 E-value=6 Score=29.78 Aligned_cols=29 Identities=31% Similarity=0.383 Sum_probs=24.1
Q ss_pred HhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 493 AHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 493 SrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
++.=.|.|+...+|..||+||.-||.-|.
T Consensus 3 ~QLE~kVEeLl~~n~~Le~EV~RLk~Ll~ 31 (33)
T 3m48_A 3 AQLEAKVEELLSKNWNLENEVARLKKLVG 31 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 44557889999999999999999998664
No 75
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=57.21 E-value=1.1e+02 Score=27.43 Aligned_cols=101 Identities=14% Similarity=0.224 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHH
Q psy2772 470 EVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRR 549 (746)
Q Consensus 470 ~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwR 549 (746)
..+.|..+...|...-..++.....--.+||++.. +-+++.++..+..=|.+......+ .+.+..-..++.-|..
T Consensus 73 ~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-~~~f~~~~~e~~~Wl~~~e~~l~~----~~~g~~~~~v~~ll~~ 147 (213)
T 1cun_A 73 GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKMTLVAS----EDYGDTLAAIQGLLKK 147 (213)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC----CCCCSSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhC----CCCCCCHHHHHHHHHH
Confidence 35678888888888888888888888889999874 577777877776666654432222 2344455556666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q psy2772 550 VQALVGDLQRQRQELSAQVKQLTEKSNSLS 579 (746)
Q Consensus 550 IQdVvggLsrQRqeLs~qVrqLt~~s~~l~ 579 (746)
.+.+..+|...+. .|.+|....+.|.
T Consensus 148 h~~~~~el~~~~~----~i~~l~~~~~~L~ 173 (213)
T 1cun_A 148 HEAFETDFTVHKD----RVNDVCANGEDLI 173 (213)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 7777777766543 3344444444443
No 76
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=57.16 E-value=99 Score=28.29 Aligned_cols=97 Identities=20% Similarity=0.241 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh---HHHHHHHHHH-hhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHH
Q psy2772 474 YRRQQRLLERELSRVRSILAHNS---KKLEETVAAN-ARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRR 549 (746)
Q Consensus 474 i~~QQrlLE~eLsrVRaeLSrnS---kELE~twaEy-aRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwR 549 (746)
.+-|-+.||.++...+.+|++.. ++||.-|.+- ..=..+|..|+...|.+-..-.. -.+.-.+.+ .+
T Consensus 4 t~~~~~~lq~~~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~------Lqq~fsq~q---~~ 74 (112)
T 1x79_B 4 TRDQVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEE------LQQGLSQAK---RD 74 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHH---HH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHH---HH
Confidence 45677888999988888888876 7899999874 34556777787777755321000 001111122 35
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q psy2772 550 VQALVGDLQRQRQELSAQVKQLTEKSNSLS 579 (746)
Q Consensus 550 IQdVvggLsrQRqeLs~qVrqLt~~s~~l~ 579 (746)
|++=|.-|..-|..++..+-.|..-.+.|.
T Consensus 75 vq~qL~~Lt~~Re~V~~eL~rLQ~eNd~L~ 104 (112)
T 1x79_B 75 VQEQMAVLMQSREQVSEELVRLQKDNDSLQ 104 (112)
T ss_dssp HHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 666777777888888877777777777776
No 77
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=56.94 E-value=12 Score=28.43 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=25.7
Q ss_pred HHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 492 LAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 492 LSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+++.-.|.|+...++.-||+||.-||.-|.
T Consensus 3 MnQLEdKVEeLl~~~~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 3 MXQIEXKLEXILSXLYHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 456667899999999999999999998775
No 78
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=56.70 E-value=40 Score=28.47 Aligned_cols=49 Identities=14% Similarity=0.147 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-----HHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 473 RYRRQQRLLERELSRVRSILAHNS-----KKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 473 Ki~~QQrlLE~eLsrVRaeLSrnS-----kELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+...+++.|.+|+..++.++...| .+-.+.=+..++|-.|++.++..|.
T Consensus 3 k~~~~~~~l~~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~ 56 (65)
T 3sja_C 3 ELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQ 56 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567789999999999999999988 3444444455666666666666665
No 79
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=56.42 E-value=33 Score=31.07 Aligned_cols=50 Identities=32% Similarity=0.399 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHH----------------hhhHHHHHHH-----HHHhhhHHHHHHHHHHHHHHH
Q psy2772 475 RRQQRLLERELSRVRSILA----------------HNSKKLEETV-----AANARLESELVVLRQKLQWSR 524 (746)
Q Consensus 475 ~~QQrlLE~eLsrVRaeLS----------------rnSkELE~tw-----aEyaRLE~EV~~LRqkLQaQr 524 (746)
+--=++||++|.+-..-|- +.|=+.|+++ ..+..||.|+..|.++||..+
T Consensus 17 rNvT~lLq~qLT~Aq~~l~~~eaQAaTCNqTV~tL~~SL~kekaq~q~qq~~v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 17 RNTTHLLQRQLTRTQDSLLQAETQANSCNLTVVTLQESLEKKVSQALEQQARIKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345778888877653332 2345677777 458889999999999998654
No 80
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=56.16 E-value=82 Score=25.75 Aligned_cols=106 Identities=13% Similarity=0.078 Sum_probs=63.2
Q ss_pred hhhhhhhHHHHHHHHHHHhHhhh---ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHH
Q psy2772 440 CSVQGQAKEMLENALGSLRHKMH---GVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVL 516 (746)
Q Consensus 440 Lq~Lk~DKD~LEsAL~~L~qqME---~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~L 516 (746)
|+..+++-+.|..=|......+. ....+|..++....+.+.|++||..-+..+..+...=+.....
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~----------- 72 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQ----------- 72 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 45566666666666666555543 3567788888888888889999888777666554332221111
Q ss_pred HHHHHHHHhhhccCCCCCCCCcchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHh
Q psy2772 517 RQKLQWSRREVCNGTASLSNGPSVAALEAELR----RVQALVGDLQRQRQELSAQVKQLT 572 (746)
Q Consensus 517 RqkLQaQr~~~~~~~~~~~~~qekAqLekELw----RIQdVvggLsrQRqeLs~qVrqLt 572 (746)
+. ..+.....|+.-|. |-+.|...+...++.|..++.++-
T Consensus 73 -----------~~-----~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~Q 116 (118)
T 3uul_A 73 -----------GT-----LSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALMELQ 116 (118)
T ss_dssp -----------TC-----SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------CC-----CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 11223334444332 455666667777777777776654
No 81
>1yvl_A Signal transducer and activator of transcription 1-alpha/beta; signaling protein; HET: PTR; 3.00A {Homo sapiens}
Probab=56.12 E-value=1.5e+02 Score=34.05 Aligned_cols=148 Identities=15% Similarity=0.155 Sum_probs=75.0
Q ss_pred hhhhhhhhhhhhhhhhH-HHHHHHHHHHhHhhhc-cCCChHHHHHHHHHHHHHHHH--HHHHHHH-------------HH
Q psy2772 431 KLHSRGRNICSVQGQAK-EMLENALGSLRHKMHG-VHASPAEVERYRRQQRLLERE--LSRVRSI-------------LA 493 (746)
Q Consensus 431 KilqelE~kLq~Lk~DK-D~LEsAL~~L~qqME~-~~dqPa~~EKi~~QQrlLE~e--LsrVRae-------------LS 493 (746)
.+|++|+.+....-.+. =-|-.=|....+.+.. |..+|+++-.+... .|.+| |++--.. ++
T Consensus 59 ~Ll~eL~~q~~~~~~e~~fLlq~~l~~~~~~~q~~y~~~P~~L~~~I~~--~L~~E~riv~~A~~~~~~~~~~~~~~~~~ 136 (683)
T 1yvl_A 59 DLLSQLDDQYSRFSLENNFLLQHNIRKSKRNLQDNFQEDPIQMSMIIYS--CLKEERKILENAQRFNQAQSGNIQSTVML 136 (683)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH--HHHHHHHHHHTTCGGGGGC------CHHH
T ss_pred HHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHhhccChHHHHHHHHH--HHHHHHHHHHHhhhhhcCCCCCccccccc
Confidence 44455554444432222 2223335555566665 89999999888754 44444 3321110 11
Q ss_pred hhhHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhh---hccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 494 HNSKKLEETVAANA----RLESELVVLRQKLQWSRRE---VCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSA 566 (746)
Q Consensus 494 rnSkELE~twaEya----RLE~EV~~LRqkLQaQr~~---~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~ 566 (746)
.--++|++.+.+.- .+|+++-.|.+ +|+...- ......+...+.....+++|...+|.....|..-|+|+-.
T Consensus 137 ~~~~~i~~~v~~lr~~~q~~e~~ik~Le~-~Qe~f~~~y~~~~~~~~~~~~~~~~~~~~~~~~lq~~~~~l~~~R~~~~~ 215 (683)
T 1yvl_A 137 DKQKELDSKVRNVKDKVMCIEHEIKSLED-LQDEYDFKCKTLQNREHETNGVAKSDQKQEQLLLKKMYLMLDNKRKEVVH 215 (683)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCC------CHHHHGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22245555555433 34444444433 2221110 0000000011223345666666789999999999999998
Q ss_pred HHHHHhhhccccccc
Q psy2772 567 QVKQLTEKSNSLSQQ 581 (746)
Q Consensus 567 qVrqLt~~s~~l~~q 581 (746)
.+..+......++.+
T Consensus 216 k~~~~l~~~~~lq~~ 230 (683)
T 1yvl_A 216 KIIELLNVTELTQNA 230 (683)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888776655555544
No 82
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=55.57 E-value=13 Score=36.59 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=10.7
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHH
Q psy2772 497 KKLEETVAANARLESELVVLRQK 519 (746)
Q Consensus 497 kELE~twaEyaRLE~EV~~LRqk 519 (746)
.+++++-+++...+.++..++..
T Consensus 115 ~~~~~a~~~~~~a~a~~~~~~~~ 137 (369)
T 4dk0_A 115 DTLNTAKATLNNAKAEMDVVQEN 137 (369)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444433
No 83
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=55.27 E-value=17 Score=27.61 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=25.3
Q ss_pred HHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 492 LAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 492 LSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+++.-.+.|+...+|.-||.||..||.-|.
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 455667889999999999999999998764
No 84
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=53.99 E-value=36 Score=30.43 Aligned_cols=53 Identities=13% Similarity=0.135 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-----HHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy2772 473 RYRRQQRLLERELSRVRSILAHNS-----KKLEETVAANARLESELVVLRQKLQWSRR 525 (746)
Q Consensus 473 Ki~~QQrlLE~eLsrVRaeLSrnS-----kELE~twaEyaRLE~EV~~LRqkLQaQr~ 525 (746)
+...+++.|.+|+..+++|+...| .+-.+.=+..++|-.|++.++..|.+++.
T Consensus 20 ~~a~~~~~lk~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~ 77 (93)
T 3sjb_C 20 ELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENK 77 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566788999999999999999888 44444445566777777777777776653
No 85
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=52.83 E-value=77 Score=26.80 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=31.3
Q ss_pred hhhhhhhHHHHHHHHHHHhHhhhc---cCCChHHHHHHHHHHHHHHHHHH
Q psy2772 440 CSVQGQAKEMLENALGSLRHKMHG---VHASPAEVERYRRQQRLLERELS 486 (746)
Q Consensus 440 Lq~Lk~DKD~LEsAL~~L~qqME~---~~dqPa~~EKi~~QQrlLE~eLs 486 (746)
|..|-..-++||.-+..+..+|.. |..+|..+..+..+..-++.+|-
T Consensus 24 le~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe 73 (89)
T 2lw1_A 24 LEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELE 73 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 445556666666777777777765 45678777777777666666654
No 86
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=52.15 E-value=94 Score=25.25 Aligned_cols=68 Identities=13% Similarity=0.037 Sum_probs=45.7
Q ss_pred hhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy2772 438 NICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAA 505 (746)
Q Consensus 438 ~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaE 505 (746)
.....+..-+..++++......=|......|.....|..+...|..--..++.....--++|+++...
T Consensus 47 ~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~ 114 (119)
T 3uun_A 47 GYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQEQMNLLNSRWECLRVASMEKQSNLHRVLMD 114 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444455566666555555666677787788888888888877777777777777777777654
No 87
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=51.70 E-value=24 Score=30.82 Aligned_cols=56 Identities=9% Similarity=0.124 Sum_probs=39.0
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 431 KLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSIL 492 (746)
Q Consensus 431 KilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeL 492 (746)
...+|+++.|+.|.++-+.|+.++....+. +|.+++.=+..=..|+++|..++..+
T Consensus 36 ~~~~El~~~l~el~e~l~DL~~SI~i~e~~------~~~EI~~Rk~~v~~l~~~i~~lk~~~ 91 (95)
T 2c5k_T 36 DQEEEIQDILKDVEETIVDLDRSIIVMKRD------ENEDVSGREAQVKNIKQQLDALKLRF 91 (95)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTS------TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456889999999999999999999986544 66666655555555555555444443
No 88
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=51.14 E-value=78 Score=26.56 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=48.2
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHH
Q psy2772 434 SRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESEL 513 (746)
Q Consensus 434 qelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV 513 (746)
.++......|...-+.|++.+..|... .|+ .-.+.+.+...|.........++..|...+..|..+-..|..-|+..
T Consensus 21 ~~~~~~~~~i~~~l~~L~~~v~~L~~~--g~W-~G~A~~ay~~~~~~W~~~a~~l~~~L~~i~~~l~~a~~~y~~~e~~~ 97 (103)
T 4i0x_B 21 SRARGFKEFVTENLDQLESRAQKLVQS--GQW-AGAAAAAYSQAHKEWMDAARELVEGLSQMEEAARTAHGAYSEAQEAN 97 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--TSS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC--CCe-echHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444332 114 34688889999999999999999999999999999998888777643
No 89
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=50.34 E-value=1.1e+02 Score=33.12 Aligned_cols=97 Identities=9% Similarity=0.041 Sum_probs=54.0
Q ss_pred chhhhhhhhhhh----hhhhhhhhhhhhhhhhhHHHHHHH-----------HHHHhHhhhccCCC----hHHHHHHHHHH
Q psy2772 418 VMIHAISRDQIA----SKLHSRGRNICSVQGQAKEMLENA-----------LGSLRHKMHGVHAS----PAEVERYRRQQ 478 (746)
Q Consensus 418 d~d~klSr~ce~----dKilqelE~kLq~Lk~DKD~LEsA-----------L~~L~qqME~~~dq----Pa~~EKi~~QQ 478 (746)
|+-+|---=|.. ||.=++++.+|..|++..+.+.+. .+.++..+.+..++ =+..+-+++|+
T Consensus 43 DwG~kCPsGCrLqg~Ldk~er~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i 122 (390)
T 1deq_A 43 DWNTKCPSGCRMKGLIDEVDQDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRI 122 (390)
T ss_pred hccCCCCccchHHHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH
Confidence 344443334444 334456667778888887777543 34455555566555 34455666666
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHH
Q psy2772 479 RLLERELSRVRSILAHNSKKLEETVAANARLESELV 514 (746)
Q Consensus 479 rlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~ 514 (746)
..|++-+...=..|...=.-||+-..+..|||-++.
T Consensus 123 ~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~Id 158 (390)
T 1deq_A 123 EILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDID 158 (390)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666654433333333344556666666666666663
No 90
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=49.83 E-value=1.1e+02 Score=25.46 Aligned_cols=49 Identities=18% Similarity=0.295 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 473 RYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 473 Ki~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
.|.+.-..|+.|+-.....+...-.+|+.+-..+..+|.||..|..++|
T Consensus 3 ~ikkKm~~lk~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq 51 (81)
T 1ic2_A 3 AIKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLK 51 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4445455666777777777777777888888888888888888887777
No 91
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=49.59 E-value=1.5e+02 Score=26.75 Aligned_cols=88 Identities=11% Similarity=0.178 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHH
Q psy2772 469 AEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELR 548 (746)
Q Consensus 469 a~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELw 548 (746)
.....|..+...|..-..+++.....=-.+||.+.. .-.+.+++..+..=|.+....... .+.+..-..++.-+.
T Consensus 75 ~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~qf~~~~~~~~~Wl~e~e~~~~~----~~~g~dl~~v~~ll~ 149 (216)
T 1u5p_A 75 FDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSS----EDYGRDLTGVQNLRK 149 (216)
T ss_dssp SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC----CCCCSSHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHhcC----cccCCCHHHHHHHHH
Confidence 345667777888888888888887777888887765 444555554444444433221111 233444444555555
Q ss_pred HHHHHHHHHHHHH
Q psy2772 549 RVQALVGDLQRQR 561 (746)
Q Consensus 549 RIQdVvggLsrQR 561 (746)
+-+.+.+.|....
T Consensus 150 kh~~~~~el~~~~ 162 (216)
T 1u5p_A 150 KHKRLEAELAAHE 162 (216)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH
Confidence 5555555555443
No 92
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=48.94 E-value=52 Score=26.97 Aligned_cols=43 Identities=30% Similarity=0.421 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 472 ERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 472 EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+.+.+|-..|-.|=++.|+||..||..| .|||.|-.-+|.-|-
T Consensus 6 dQL~~QVe~Lk~ENshLrrEL~dNS~~l-------skLE~ets~mKevlk 48 (54)
T 1deb_A 6 DQLLKQVEALKMENSNLRQELEDNSNHL-------TKLETEASNMKEVLK 48 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhHHHH-------HHHHhhhhhHHHHHH
Confidence 5577888899999999999999998765 678888777776554
No 93
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=48.77 E-value=19 Score=34.34 Aligned_cols=31 Identities=26% Similarity=0.264 Sum_probs=16.4
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhHHH
Q psy2772 482 ERELSRVRSILAHNSKKLEETVAANARLESE 512 (746)
Q Consensus 482 E~eLsrVRaeLSrnSkELE~twaEyaRLE~E 512 (746)
.+.+-.+.+.|+..+++++..-++.++||.+
T Consensus 79 r~akk~~ea~la~l~~~~~~LeAE~aKLeEe 109 (146)
T 2xnx_M 79 RNLLGNAKLELDQLSSEKEQLTIEKAKLEEE 109 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3344445555555555555555666665543
No 94
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=48.08 E-value=1.4e+02 Score=31.49 Aligned_cols=22 Identities=9% Similarity=0.350 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2772 542 ALEAELRRVQALVGDLQRQRQE 563 (746)
Q Consensus 542 qLekELwRIQdVvggLsrQRqe 563 (746)
+|++++..+.-=+-.|.+.|.-
T Consensus 237 ~~~~~~~~lkp~l~ql~k~rd~ 258 (373)
T 3hhm_B 237 EIDKRMNSIKPDLIQLRKTRDQ 258 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhccChHHHHHHHHHHH
Confidence 4666666666666666665543
No 95
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=46.91 E-value=61 Score=27.65 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=17.3
Q ss_pred hhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhc
Q psy2772 431 KLHSRGRNICSVQGQAKEMLENALGSLRHKMHG 463 (746)
Q Consensus 431 KilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~ 463 (746)
|-+.+++..+..++.+.+.|..-...++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~ 35 (112)
T 1l8d_A 3 KLLEELETKKTTIEEERNEITQRIGELKNKIGD 35 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566666655555555555444444433
No 96
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=46.88 E-value=18 Score=34.05 Aligned_cols=60 Identities=20% Similarity=0.268 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhhh
Q psy2772 509 LESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRV--------QALVGDLQRQRQELSAQVKQLTEK 574 (746)
Q Consensus 509 LE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRI--------QdVvggLsrQRqeLs~qVrqLt~~ 574 (746)
++.++..|...|++.+..+.. .-+.+..|+.||--. --.|++=.+.|..+-.-+++|.+.
T Consensus 44 ~~~e~~~L~~~l~eE~~~R~~------aE~~~~~ie~ElE~LTasLFeEAN~MVa~ar~~~~~~e~r~~~L~~q 111 (135)
T 2e7s_A 44 RDDEVKRLREDIAKENELRTK------AEEEADKLNKEVEDLTASLFDEANNLVADARMEKYAIEILNKRLTEQ 111 (135)
T ss_dssp HHHHHHTHHHHHHHTTSHHHH------HHHTTHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666677777755432221 112344444443211 122333356677777777777643
No 97
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=46.79 E-value=1.1e+02 Score=33.49 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy2772 543 LEAELRRVQALVGDLQRQRQELSAQVKQLTEK 574 (746)
Q Consensus 543 LekELwRIQdVvggLsrQRqeLs~qVrqLt~~ 574 (746)
+..-|..++.++..|...=+.|...+.++.++
T Consensus 166 ~~~~i~~L~~~~~~l~~ki~~l~~~~~~~~~~ 197 (464)
T 1m1j_B 166 IPSSLRVLRAVIDSLHKKIQKLENAIATQTDY 197 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34556666666666666666777777766654
No 98
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=46.48 E-value=2.1e+02 Score=27.72 Aligned_cols=22 Identities=18% Similarity=0.441 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2772 544 EAELRRVQALVGDLQRQRQELS 565 (746)
Q Consensus 544 ekELwRIQdVvggLsrQRqeLs 565 (746)
+.|-+..++-+..|.+-+-.+.
T Consensus 117 ~~e~r~L~Ekl~~lEKe~a~~e 138 (168)
T 3o0z_A 117 EGERKEAQDMLNHSEKEKNNLE 138 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 3444555555555555444444
No 99
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=45.75 E-value=49 Score=30.28 Aligned_cols=54 Identities=19% Similarity=0.151 Sum_probs=42.2
Q ss_pred hhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhh----ccCCChHHHHHHHHHHHHHH
Q psy2772 426 DQIASKLHSRGRNICSVQGQAKEMLENALGSLRHKMH----GVHASPAEVERYRRQQRLLE 482 (746)
Q Consensus 426 ~ce~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME----~~~dqPa~~EKi~~QQrlLE 482 (746)
|+..||+.- +.|..|+++.-..|+.|..++|++. +|.-+|-.+.|-.+|+|..+
T Consensus 26 ~~~~~~~tM---~~ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E~DPDevNK~tl~~R~~~ 83 (107)
T 2k48_A 26 FQGIDPFTM---STLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQNRRAA 83 (107)
T ss_dssp CCCCCSHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred hhccccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 456666643 3566788899999999999999864 56678999999999998653
No 100
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=44.84 E-value=1e+02 Score=26.33 Aligned_cols=32 Identities=13% Similarity=0.065 Sum_probs=18.9
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhHhhhccC
Q psy2772 434 SRGRNICSVQGQAKEMLENALGSLRHKMHGVH 465 (746)
Q Consensus 434 qelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~ 465 (746)
++|...|-.+..||..|+.-++.++-.++.++
T Consensus 3 ~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk 34 (86)
T 3swk_A 3 RELRRQVDQLTNDKARVEVERDNLAEDIMRLR 34 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666665555554444443
No 101
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=44.77 E-value=12 Score=28.44 Aligned_cols=29 Identities=24% Similarity=0.265 Sum_probs=23.9
Q ss_pred HhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 493 AHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 493 SrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
++.=.|-|+...+|.-||+||.-||.-|.
T Consensus 4 ~QLEdKVEeLl~~n~~Le~EV~RLk~LL~ 32 (34)
T 1uo4_A 4 KQIEDKGEEILSKLYHIENELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHc
Confidence 44557888999999999999999997664
No 102
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=44.53 E-value=1.2e+02 Score=28.09 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=35.3
Q ss_pred hccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH-hhhHHHHHHHHHHHHHHH
Q psy2772 462 HGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAAN-ARLESELVVLRQKLQWSR 524 (746)
Q Consensus 462 E~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEy-aRLE~EV~~LRqkLQaQr 524 (746)
.+...||+--=-...+.+=|.+||.|+|.+--..+|--|+.--.. +-+|+|++.+|++--..+
T Consensus 18 ~~~~~qp~~r~~~~~~sDPL~~ELeRLr~~~d~~~K~HE~kklqLkse~e~E~ae~k~KYD~~l 81 (115)
T 3vem_A 18 EQIAVQPVPQIPFPVFNDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRKF 81 (115)
T ss_dssp ---------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCcCCCccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334433233556677799999999999888888777764332 346788888888755444
No 103
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=44.14 E-value=1.2e+02 Score=32.05 Aligned_cols=46 Identities=7% Similarity=0.295 Sum_probs=29.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Q psy2772 538 PSVAALEAELRRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQQIR 583 (746)
Q Consensus 538 qekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi~ 583 (746)
.+..-|..=-.+++..|..|...++.|...+++-.+..-.+..+|.
T Consensus 198 ~e~~~~~~n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 243 (373)
T 3hhm_B 198 KEIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMN 243 (373)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444555555567777777888888888888776665545554444
No 104
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=43.79 E-value=19 Score=28.80 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=23.8
Q ss_pred HHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHH
Q psy2772 487 RVRSILAHNSKKLEETVAANARLESELVVLRQKL 520 (746)
Q Consensus 487 rVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkL 520 (746)
.|-+-|.++..++|....||..|+.++..|+.+|
T Consensus 24 EVD~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~l 57 (57)
T 2wuj_A 24 EVNEFLAQVRKDYEIVLRKKTELEAKVNELDERI 57 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3556677888888888888888888888887654
No 105
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=43.60 E-value=94 Score=26.31 Aligned_cols=50 Identities=22% Similarity=0.334 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 472 ERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 472 EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+.+..+-..||.+|..+|+++++-..|.++--+--.+||.|+..-|.-|.
T Consensus 8 ~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLLE 57 (74)
T 2xv5_A 8 DTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLE 57 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444445578888888888888888888888888888888888876665
No 106
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=43.09 E-value=54 Score=28.02 Aligned_cols=56 Identities=14% Similarity=0.159 Sum_probs=41.2
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q psy2772 434 SRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKL 499 (746)
Q Consensus 434 qelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkEL 499 (746)
.++..+||.+...-..||.-+..+.++|+..+ ..|.-++.||.++-..|.---.+|
T Consensus 3 ~~~~~kLq~~E~~N~~Le~~v~~le~~Le~s~----------~~q~~~~~Elk~~~e~Ld~KI~eL 58 (72)
T 3cve_A 3 HNSHMKLQEVEIRNKDLEGQLSEMEQRLEKSQ----------SEQDAFRSNLKTLLEILDGKIFEL 58 (72)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHhhHHHHH
Confidence 35677888888888889998888888887665 447777777777776666544443
No 107
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=42.59 E-value=64 Score=34.24 Aligned_cols=67 Identities=28% Similarity=0.335 Sum_probs=51.4
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccC
Q psy2772 505 ANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQQIRP 584 (746)
Q Consensus 505 EyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi~~ 584 (746)
|..-||.||..|++.+.+-.+ ...+++.|+.+.++-+-.....|..|-+++-.|.++-.... .+||
T Consensus 4 ~~~~l~~el~~~~~~~~~l~~-------------~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gnIrV~v-RvRP 69 (412)
T 3u06_A 4 MHAALSTEVVHLRQRTEELLR-------------CNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDNIRVFC-RIRP 69 (412)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEE-EECC
T ss_pred hHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EcCC
Confidence 345678888888887765543 45567888888888888889999999999999998766554 5666
Q ss_pred C
Q psy2772 585 G 585 (746)
Q Consensus 585 ~ 585 (746)
-
T Consensus 70 ~ 70 (412)
T 3u06_A 70 P 70 (412)
T ss_dssp C
T ss_pred C
Confidence 3
No 108
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=41.87 E-value=44 Score=25.64 Aligned_cols=32 Identities=19% Similarity=0.152 Sum_probs=25.4
Q ss_pred HHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy2772 492 LAHNSKKLEETVAANARLESELVVLRQKLQWS 523 (746)
Q Consensus 492 LSrnSkELE~twaEyaRLE~EV~~LRqkLQaQ 523 (746)
+.+.-.|.|+.-.++.-||+||.-||..|-++
T Consensus 3 MnQLE~KVEeLl~~~~~Le~eV~RLk~ll~~~ 34 (36)
T 1kd8_B 3 VKQLKAKVEELKSKLWHLKNKVARLKKKNAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 34555788888899999999999999887654
No 109
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=41.59 E-value=2.4e+02 Score=26.93 Aligned_cols=92 Identities=10% Similarity=0.108 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHH
Q psy2772 469 AEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELR 548 (746)
Q Consensus 469 a~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELw 548 (746)
.....|..+...|...-..++.....--.+|+++. .+-++..++..|-.=|......... .+.+.....++.-|.
T Consensus 185 ~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~-~~~~F~~~~~~l~~Wl~~~~~~l~~----~~~~~d~~~~e~ll~ 259 (323)
T 3edv_A 185 DKADDIQKRENEVLEAWKSLLDACESRRVRLVDTG-DKFRFFSMVRDLMLWMEDVIRQIEA----QEKPRDVSSVELLMN 259 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHT----CCCCCSHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhC----CcCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999998 4778888887777666544332222 123334455677777
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy2772 549 RVQALVGDLQRQRQELS 565 (746)
Q Consensus 549 RIQdVvggLsrQRqeLs 565 (746)
+-+.+-+.+...+..+.
T Consensus 260 ~h~~l~~ei~~~~~~~~ 276 (323)
T 3edv_A 260 NHQGIKAEIDARNDSFT 276 (323)
T ss_dssp HHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777777766665443
No 110
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=41.53 E-value=77 Score=32.10 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=43.7
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q psy2772 430 SKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEET 502 (746)
Q Consensus 430 dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~t 502 (746)
=|-+++-|..|+.+++.|++|..=+..|+.+ +|.. .| -..||.||++--++..-.-+.|.+.
T Consensus 96 LK~IR~~E~svqp~R~~R~~l~~~I~kLk~k------~P~s-~k----l~~LeqELvraEae~lvaEAqL~n~ 157 (234)
T 3plt_A 96 LKSIRNIEASVQPSRDRKEKITDEIAHLKYK------DPQS-TK----IPVLEQELVRAEAESLVAEAQLSNI 157 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------CTTC-TH----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhcc------CCCC-ch----HHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 3678889999999999999999888877765 3433 23 2478888887766654444444443
No 111
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=41.27 E-value=37 Score=25.75 Aligned_cols=29 Identities=28% Similarity=0.266 Sum_probs=24.3
Q ss_pred HHhhhHHHHHHHHHHhhhHHHHHHHHHHH
Q psy2772 492 LAHNSKKLEETVAANARLESELVVLRQKL 520 (746)
Q Consensus 492 LSrnSkELE~twaEyaRLE~EV~~LRqkL 520 (746)
+.+.-.|+|+.-.++.-||+||.-||.-|
T Consensus 3 MnQledKvEel~~~~~~l~nEv~Rl~~lL 31 (34)
T 2r2v_A 3 LKQVADKLEEVASKLYHNANELARVAKLL 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 45677889999999999999999888765
No 112
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=41.18 E-value=2.1e+02 Score=30.91 Aligned_cols=25 Identities=20% Similarity=0.222 Sum_probs=14.3
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy2772 498 KLEETVAANARLESELVVLRQKLQWSRR 525 (746)
Q Consensus 498 ELE~twaEyaRLE~EV~~LRqkLQaQr~ 525 (746)
+|+..+ ......+..|+++++....
T Consensus 109 ~l~~~~---~~~~~~i~~L~~~v~~l~~ 133 (411)
T 3ghg_C 109 YLQEIY---NSNNQKIVNLKEKVAQLEA 133 (411)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 444443 3334566777777776653
No 113
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=40.89 E-value=1.8e+02 Score=25.31 Aligned_cols=42 Identities=17% Similarity=0.182 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 480 LLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 480 lLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
.|+.+|..+..+=++.-.+|+..=.+.+.|..++..++..+.
T Consensus 8 ~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~ 49 (96)
T 3q8t_A 8 QLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAE 49 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 345555555555555555555555555666555555555444
No 114
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=40.30 E-value=1.5e+02 Score=24.17 Aligned_cols=64 Identities=14% Similarity=0.096 Sum_probs=43.0
Q ss_pred hhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q psy2772 442 VQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAA 505 (746)
Q Consensus 442 ~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaE 505 (746)
.+..-+..++++......=|......|.....|..+-..|..--..++.....-.++|+.+...
T Consensus 51 ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~ 114 (118)
T 3uul_A 51 ELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQEQMTLLNARWEALRVESMERQSRLHDALME 114 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455566666555555666677777777888877777777777777777777777766543
No 115
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=39.89 E-value=1e+02 Score=28.42 Aligned_cols=70 Identities=11% Similarity=0.051 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHH
Q psy2772 446 AKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQK 519 (746)
Q Consensus 446 DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqk 519 (746)
++=.+=.||...+.-+.. -...+.+..|-..+++|+....-+|...--++|++-.++.+|..++..|...
T Consensus 56 ~r~aVLaALNiadEl~k~----~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~ 125 (138)
T 3hnw_A 56 ELRTDMMYLNIADDYFKA----KKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKN 125 (138)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555544322 2335566666666677777777777777766766666666666666555443
No 116
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=39.79 E-value=2.3e+02 Score=30.78 Aligned_cols=71 Identities=13% Similarity=0.184 Sum_probs=37.4
Q ss_pred HHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh-hhHHHHHHHHHHHHHHHhh
Q psy2772 449 MLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANA-RLESELVVLRQKLQWSRRE 526 (746)
Q Consensus 449 ~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEya-RLE~EV~~LRqkLQaQr~~ 526 (746)
.+++..+-|++.+..+..+ -.+=+.+=+.+..+=..--......|+..++|. -||+-...||.++-.|..+
T Consensus 64 ~~~~rIe~L~~~L~~~s~s-------~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~~~ 135 (390)
T 1deq_A 64 DFTSRINKLRDSLFNYQKN-------SKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQVQR 135 (390)
T ss_pred hHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 3445555555554444322 222222223333333333344556677777775 4788888888777777653
No 117
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=39.72 E-value=2.7e+02 Score=27.01 Aligned_cols=19 Identities=21% Similarity=0.415 Sum_probs=10.0
Q ss_pred hhhhhhhhhhhhhHHHHHHHHH
Q psy2772 290 LRLKQEYFMCAATLQVISLPFK 311 (746)
Q Consensus 290 LRLKQQYFfVSASLQDIIRrfK 311 (746)
..|-.+| |..|+.|.++|.
T Consensus 56 a~iE~eY---ak~L~kLakk~~ 74 (312)
T 3abh_A 56 ARIEKAY---AQQLTEWARRWR 74 (312)
T ss_dssp HHHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHH---HHHHHHHHHHHH
Confidence 3444455 555555555553
No 118
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=39.28 E-value=1.2e+02 Score=33.54 Aligned_cols=48 Identities=10% Similarity=0.218 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHH
Q psy2772 472 ERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQK 519 (746)
Q Consensus 472 EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqk 519 (746)
+.+.+.+..+++-+...=.-|...=|++|+.-+...-.|++...|+++
T Consensus 462 ~~fl~~~~~~~~~ilq~d~~l~~~~k~~~~~~~~~e~~~~~~~~l~~~ 509 (592)
T 1f5n_A 462 QTYLKSKESMTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEM 509 (592)
T ss_dssp HHHHHHTHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444443333333444455665555555555555555544
No 119
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=39.26 E-value=1.7e+02 Score=26.68 Aligned_cols=41 Identities=22% Similarity=0.250 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 481 LERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 481 LE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
|+..+....++|++..+.--+|--|+.+|..++..|+...+
T Consensus 45 l~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l~~~~~ 85 (120)
T 3i00_A 45 LKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQRE 85 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44455555555555555566677777788877777655443
No 120
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=39.06 E-value=22 Score=27.00 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=24.0
Q ss_pred HHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 492 LAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 492 LSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+++.-.|.|+...++.-||+||.-||.-|.
T Consensus 3 MnQLEdKvEeLl~~~~~L~~EV~RLk~lL~ 32 (34)
T 2bni_A 3 MKQIEDKLEEILSKGHHICNELARIKKLLG 32 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hhHHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 345557889999999999999999988765
No 121
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=38.95 E-value=30 Score=26.21 Aligned_cols=29 Identities=21% Similarity=0.261 Sum_probs=23.4
Q ss_pred HhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 493 AHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 493 SrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
.+.-.|.|+.-.+|.-||+||.-||..|-
T Consensus 4 nQLEdkVEeLl~~~~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 4 KQLADAVEELASANYHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 44556788888899999999999988763
No 122
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=37.82 E-value=32 Score=30.14 Aligned_cols=71 Identities=14% Similarity=0.160 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHH
Q psy2772 472 ERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQ 551 (746)
Q Consensus 472 EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQ 551 (746)
..+..|...||+.|..+.... ..++++.-+..+.||.++..+|+.++.|...-.. .-..|..|+.|+-.-.
T Consensus 15 ~~Lq~~~~~LE~~l~e~E~~~---~~e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~------LlnvKl~Le~EIatYr 85 (95)
T 3mov_A 15 FQGQKESRACLERIQELEDLL---AKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQ------LLDVKLALDMEISAYR 85 (95)
T ss_dssp ---CCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
Confidence 334444566777776666644 4577777777888999999999999877643110 1124666666654433
No 123
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=37.34 E-value=82 Score=27.44 Aligned_cols=44 Identities=20% Similarity=0.233 Sum_probs=36.8
Q ss_pred hhhhhhhhHHHHHHHHHHHhHhhh----ccCCChHHHHHHHHHHHHHH
Q psy2772 439 ICSVQGQAKEMLENALGSLRHKMH----GVHASPAEVERYRRQQRLLE 482 (746)
Q Consensus 439 kLq~Lk~DKD~LEsAL~~L~qqME----~~~dqPa~~EKi~~QQrlLE 482 (746)
-|..|+++.-..|+.|...+|++. .|.-+|-.+.|-.+|+|..+
T Consensus 6 ~l~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNK~~~~~R~~~ 53 (78)
T 2ic6_A 6 TLKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAA 53 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 466788899999999999999864 56678999999999998653
No 124
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=37.21 E-value=50 Score=27.40 Aligned_cols=45 Identities=11% Similarity=0.013 Sum_probs=36.5
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhcc
Q psy2772 420 IHAISRDQIASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGV 464 (746)
Q Consensus 420 d~klSr~ce~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~ 464 (746)
-.|.+.+..+=.-++.|...++.|+.+++.|..-...|.+++..-
T Consensus 36 ~sK~~iL~~Ai~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L 80 (83)
T 1nkp_B 36 ASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRAL 80 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457777777777788899999999999999988888888887653
No 125
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=37.18 E-value=20 Score=34.99 Aligned_cols=48 Identities=10% Similarity=0.210 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy2772 475 RRQQRLLERELSRVRSILAHN---SKKLEETVAANARLESELVVLRQKLQW 522 (746)
Q Consensus 475 ~~QQrlLE~eLsrVRaeLSrn---SkELE~twaEyaRLE~EV~~LRqkLQa 522 (746)
..+..+.+.++.|.+.+..+. -.+++++-+++...+.++..++..|..
T Consensus 89 ~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~~~a~l~~~~a~l~~ 139 (341)
T 3fpp_A 89 EAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR 139 (341)
T ss_dssp HHHHHHHTHHHHHHHHHHHTSSSTTHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566667777766665 277888888888777777777766653
No 126
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=37.14 E-value=2.1e+02 Score=24.92 Aligned_cols=67 Identities=10% Similarity=0.142 Sum_probs=48.4
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHH
Q psy2772 435 RGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELV 514 (746)
Q Consensus 435 elE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~ 514 (746)
.++..|+.|+.+...|-. +++++..+...|..+|....+++.+.-.+=++-|.+|..+-..+.
T Consensus 8 ~l~~eL~~l~~eE~~L~~-----------------eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~ 70 (96)
T 3q8t_A 8 QLQRELKELALEEERLIQ-----------------ELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQL 70 (96)
T ss_dssp HHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-----------------HHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 445556666666555544 445667778888899999999999888888999999887766655
Q ss_pred HHHH
Q psy2772 515 VLRQ 518 (746)
Q Consensus 515 ~LRq 518 (746)
.+=.
T Consensus 71 e~~d 74 (96)
T 3q8t_A 71 ELDD 74 (96)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5433
No 127
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=36.55 E-value=1.2e+02 Score=34.09 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHH
Q psy2772 473 RYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVL 516 (746)
Q Consensus 473 Ki~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~L 516 (746)
.++++..-|++++...=..|+..=.-||+-+.+..|||-++..-
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDIdiq 157 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIK 157 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555665555554555555566788888889999988753
No 128
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=36.27 E-value=4.3e+02 Score=28.32 Aligned_cols=25 Identities=8% Similarity=-0.009 Sum_probs=16.9
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHH
Q psy2772 498 KLEETVAANARLESELVVLRQKLQW 522 (746)
Q Consensus 498 ELE~twaEyaRLE~EV~~LRqkLQa 522 (746)
+||..+.=+...|.+...++.+.+.
T Consensus 91 ~Le~L~qFl~d~~ee~~Wi~EKe~~ 115 (450)
T 3r6n_A 91 HLRQLQNIIQATSREIMWINDCEEE 115 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666677777888877663
No 129
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=36.14 E-value=1.5e+02 Score=26.47 Aligned_cols=13 Identities=15% Similarity=0.171 Sum_probs=5.0
Q ss_pred HHHHHHHHHHhhh
Q psy2772 497 KKLEETVAANARL 509 (746)
Q Consensus 497 kELE~twaEyaRL 509 (746)
++|....+|...|
T Consensus 89 ~~~~~l~~Ek~~L 101 (107)
T 2no2_A 89 AEFAELEKERDSL 101 (107)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 130
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=36.11 E-value=19 Score=27.82 Aligned_cols=18 Identities=11% Similarity=-0.082 Sum_probs=15.4
Q ss_pred hhhhhhhhhhhhhhHHHH
Q psy2772 433 HSRGRNICSVQGQAKEML 450 (746)
Q Consensus 433 lqelE~kLq~Lk~DKD~L 450 (746)
+..++.++++||++|++|
T Consensus 17 i~~l~~kl~~LkeEKHQL 34 (38)
T 2l5g_A 17 ILKLEEKLLALQEEKHQL 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 566889999999999887
No 131
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=35.73 E-value=1.2e+02 Score=26.52 Aligned_cols=67 Identities=19% Similarity=0.320 Sum_probs=45.7
Q ss_pred hhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 494 HNSKKLEETVAANARL---ESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQVK 569 (746)
Q Consensus 494 rnSkELE~twaEyaRL---E~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qVr 569 (746)
-.++++|+.-.||..| -+.|.+.|..|-+..+...+ ++..|+-||..++.+-..|...=.||...++
T Consensus 6 gmgkevEnLi~EN~eLl~TKNaLnvvk~DLI~rvdELt~---------E~e~l~~El~s~~~~~~r~~~ri~elEeElk 75 (77)
T 2w83_C 6 FMGREVENLILENTQLLETKNALNIVKNDLIAKVDELTC---------EKDVLQGELEAVKQAKLKLEEKNRELEEELR 75 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3468889988888877 35678888888887765443 8888999999888887777766666654443
No 132
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=35.68 E-value=2.7e+02 Score=25.71 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHH
Q psy2772 484 ELSRVRSILAHNSKKLEETVAANARLESELVVL 516 (746)
Q Consensus 484 eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~L 516 (746)
||+..+..+-...+++++.-.++..|+.++..|
T Consensus 97 el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 97 ELIAAQIKAESSAKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444555555555555555555555555444
No 133
>4i0x_A ESAT-6-like protein MAB_3112; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=35.53 E-value=1.2e+02 Score=25.12 Aligned_cols=72 Identities=17% Similarity=0.207 Sum_probs=44.9
Q ss_pred hhhhHHHHHHHHHHHhHhh---hccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHH
Q psy2772 443 QGQAKEMLENALGSLRHKM---HGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVV 515 (746)
Q Consensus 443 Lk~DKD~LEsAL~~L~qqM---E~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~ 515 (746)
+..-.+.|+..|..+...+ ...|. =.+.+.+...+.........+...|...+..|..+-..|..-|.+...
T Consensus 12 ~~~~~~~i~~~l~~l~~~v~~l~~~W~-G~Aa~af~~~~~~w~~~a~~l~~~L~~i~~~l~~aa~~y~~~d~~~a~ 86 (94)
T 4i0x_A 12 AASLADQMRAGSNSLDRDVQSLFGVWK-GSAADAYRSGWDEMQDGATKVWNALTDIASTLGSNAAAFHAQETSTAS 86 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCC-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444443 34453 467888888899999999999999999999999988888887775543
No 134
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=35.29 E-value=46 Score=25.52 Aligned_cols=31 Identities=19% Similarity=0.141 Sum_probs=24.7
Q ss_pred HhhhHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy2772 493 AHNSKKLEETVAANARLESELVVLRQKLQWS 523 (746)
Q Consensus 493 SrnSkELE~twaEyaRLE~EV~~LRqkLQaQ 523 (746)
.+.-.|.|+.-.++.-||+||.-||.-|-++
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~~~ 34 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKENAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhccc
Confidence 3445688888899999999999999877543
No 135
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=34.97 E-value=57 Score=28.84 Aligned_cols=33 Identities=6% Similarity=0.003 Sum_probs=17.0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhHhhhccCCChHH
Q psy2772 438 NICSVQGQAKEMLENALGSLRHKMHGVHASPAE 470 (746)
Q Consensus 438 ~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~ 470 (746)
.+|+.|+++.++-..+=+++-.=+.-|..||+.
T Consensus 22 ~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~ 54 (98)
T 2ke4_A 22 QQLEERSRELQKEVDQREALKKMKDVYEKTPQM 54 (98)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 344444444444444444554445556666666
No 136
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=34.55 E-value=3.4e+02 Score=26.62 Aligned_cols=56 Identities=7% Similarity=0.130 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Q psy2772 497 KKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQR 561 (746)
Q Consensus 497 kELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQR 561 (746)
+++|++=+.+.++..++...++........ .+ ......+.++-.+=+.+.+|..+|
T Consensus 183 k~~eK~~~k~~k~~~~~~~a~~~Y~~~v~~-~n--------~~~~~~~~~~~~~~~~~Q~le~~R 238 (337)
T 2x3v_A 183 EQQKKLVDKVDKCRQDVQKTQEKYEKVLED-VG--------KTTPQYMEGMEQVFEQCQQFEEKR 238 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555555555555544432 11 123445555555555555565555
No 137
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=34.41 E-value=90 Score=28.11 Aligned_cols=44 Identities=20% Similarity=0.233 Sum_probs=36.6
Q ss_pred hhhhhhhhHHHHHHHHHHHhHhhh----ccCCChHHHHHHHHHHHHHH
Q psy2772 439 ICSVQGQAKEMLENALGSLRHKMH----GVHASPAEVERYRRQQRLLE 482 (746)
Q Consensus 439 kLq~Lk~DKD~LEsAL~~L~qqME----~~~dqPa~~EKi~~QQrlLE 482 (746)
-|..|+++.-..|+.|..++|++. .|.-+|-.+.|-.+|+|..+
T Consensus 6 ~i~eLq~e~~~~E~QL~~A~QKLkdA~~~~e~DPDevNk~~~~~R~~~ 53 (96)
T 2ic9_A 6 TLKEVQDNITLHEQRLVTTRQKLKDAERAVELDPDDVNKSTLQSRRAA 53 (96)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 366788899999999999999864 56678999999999998654
No 138
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=34.07 E-value=3.1e+02 Score=26.00 Aligned_cols=86 Identities=12% Similarity=0.176 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHH
Q psy2772 469 AEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELR 548 (746)
Q Consensus 469 a~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELw 548 (746)
...+.|..+...|...-..++..+..=-.+||.+.. .-++.+++..+..-|.+....... .+.+..-..++.-+.
T Consensus 75 ~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~~f~~~~~~~~~Wl~e~e~~~~~----~~~g~dl~~v~~ll~ 149 (322)
T 1u4q_A 75 FDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSS----EDYGRDLTGVQNLRK 149 (322)
T ss_dssp SCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC----CCCCSSHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccC----CCcCCCHHHHHHHHH
Confidence 334566666777777777777777777788888876 455666666555555544322112 123333334444444
Q ss_pred HHHHHHHHHHH
Q psy2772 549 RVQALVGDLQR 559 (746)
Q Consensus 549 RIQdVvggLsr 559 (746)
+-+.+...|..
T Consensus 150 ~h~~l~~el~~ 160 (322)
T 1u4q_A 150 KHKRLEAELAA 160 (322)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555444444
No 139
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=33.81 E-value=78 Score=27.42 Aligned_cols=56 Identities=13% Similarity=0.164 Sum_probs=39.1
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q psy2772 434 SRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKL 499 (746)
Q Consensus 434 qelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkEL 499 (746)
.++..+||.+...-..||.-+..+.++|+..+ .+|.-++.||.++-..|.---.+|
T Consensus 9 e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~----------~~q~~~~~Elk~l~e~Ld~KI~eL 64 (79)
T 3cvf_A 9 EETQQKVQDLETRNAELEHQLRAMERSLEEAR----------AERERARAEVGRAAQLLDVSLFEL 64 (79)
T ss_dssp -CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHhhHHHHH
Confidence 34566778888888888888888888877654 447777777777776666444433
No 140
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=33.52 E-value=3.8e+02 Score=26.81 Aligned_cols=57 Identities=18% Similarity=0.049 Sum_probs=35.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy2772 427 QIASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHN 495 (746)
Q Consensus 427 ce~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrn 495 (746)
...|.|+......+..+.++-|.||..+. .. .++.. ..+-..|+++|+.+|..|..+
T Consensus 160 ~lld~ivd~~~~~l~~l~~~i~~lE~~l~-------~~-~~~~~----l~~l~~lrr~l~~lrr~l~~~ 216 (339)
T 4ev6_A 160 HILNEITRSYSRILMNLEDELEELEDKLL-------AG-YDREV----MEKILGLRKTLVYFHKSLIAN 216 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTST-------TC-CCHHH----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------hh-hhhhH----HHHHHHHHHHHHHHHHHhhhh
Confidence 35678888888888888888888886442 11 12222 333345677777777766544
No 141
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=32.94 E-value=3.8e+02 Score=26.66 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=12.8
Q ss_pred chhhhhhhhhhhhhhHHHHHHHHH
Q psy2772 288 KELRLKQEYFMCAATLQVISLPFK 311 (746)
Q Consensus 288 KeLRLKQQYFfVSASLQDIIRrfK 311 (746)
+...|-.+| |..|+.|.++|.
T Consensus 54 eRa~IE~eY---ak~L~kLakk~~ 74 (350)
T 3aco_A 54 ERARIEKAY---AQQLTEWARRWR 74 (350)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHH
Confidence 344555565 667777777664
No 142
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=32.16 E-value=2.6e+02 Score=24.53 Aligned_cols=72 Identities=14% Similarity=0.063 Sum_probs=50.1
Q ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh
Q psy2772 430 SKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANA 507 (746)
Q Consensus 430 dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEya 507 (746)
.+++.+.|.+|+..+.--|.||+.|.++... ..-.|+.+-++-++|+-+ .+.+.+.++..=.+++.--..|.
T Consensus 11 ~~lv~~fe~rL~~Yr~~IeelE~~L~s~s~~---~~~Tpq~L~~~l~~~h~~---FiaLAa~l~~lH~~V~~~Ke~Yl 82 (93)
T 3t98_B 11 RVLVQQFEVQLQQYRQQIEELENHLATQANN---SHITPQDLSMAMQKIYQT---FVALAAQLQSIHENVKVLKEQYL 82 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH---TTSCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---CCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999987532 335698888888887743 44444555444444444444443
No 143
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=32.05 E-value=65 Score=24.33 Aligned_cols=28 Identities=14% Similarity=0.107 Sum_probs=22.6
Q ss_pred HhhhHHHHHHHHHHhhhHHHHHHHHHHH
Q psy2772 493 AHNSKKLEETVAANARLESELVVLRQKL 520 (746)
Q Consensus 493 SrnSkELE~twaEyaRLE~EV~~LRqkL 520 (746)
.+.-.|.|+-..++.-||+||.-||.-|
T Consensus 3 nQLEdKVEell~~~~~le~EV~Rl~~ll 30 (33)
T 2wq1_A 3 KQLEDKIEENTSKIYHNTNEIARNTKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 4455788888899999999999888654
No 144
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=31.46 E-value=5.1e+02 Score=28.28 Aligned_cols=34 Identities=6% Similarity=0.067 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy2772 468 PAEVERYRRQQRLLERELSRVRSILAHNSKKLEE 501 (746)
Q Consensus 468 Pa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~ 501 (746)
...+-.+-.+.+.|+.++-..+++--.+||++-+
T Consensus 69 ~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~ 102 (501)
T 1wle_A 69 LPGIISTWQELRQLREQIRSLEEEKEAVTEAVRA 102 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566667778888998888888888888888654
No 145
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=31.02 E-value=2.5e+02 Score=25.24 Aligned_cols=78 Identities=10% Similarity=0.090 Sum_probs=48.4
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH--------HHHHH
Q psy2772 434 SRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLE--------ETVAA 505 (746)
Q Consensus 434 qelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE--------~twaE 505 (746)
-.+.+.|++|+.++...+.=+..|..++ ++-+.++...|.++..|-.+|-..|..|= .+=.+
T Consensus 8 e~lre~l~~le~~~~~~~~e~~~L~~~l----------~eE~~~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~e 77 (97)
T 2eqb_B 8 NQLKEDYNTLKRELSDRDDEVKRLREDI----------AKENELRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKE 77 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666666666555443 44556677788888888888877776552 22344
Q ss_pred HhhhHHHHHHHHHHHH
Q psy2772 506 NARLESELVVLRQKLQ 521 (746)
Q Consensus 506 yaRLE~EV~~LRqkLQ 521 (746)
.+.+|.-+.+|+..|.
T Consensus 78 ~~~~e~kn~~L~~qL~ 93 (97)
T 2eqb_B 78 KYAIEILNKRLTEQLR 93 (97)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5556666666666554
No 146
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=30.65 E-value=63 Score=27.29 Aligned_cols=44 Identities=9% Similarity=-0.025 Sum_probs=34.8
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhc
Q psy2772 420 IHAISRDQIASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHG 463 (746)
Q Consensus 420 d~klSr~ce~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~ 463 (746)
-.|++.+..+-.-++.++...+.|..+|+.|..=...|++++++
T Consensus 36 ~sk~~iL~kA~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~ 79 (80)
T 1nlw_A 36 HTTLSLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEK 79 (80)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 35677777777778888888899999998888877777777764
No 147
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=30.40 E-value=3e+02 Score=24.69 Aligned_cols=118 Identities=13% Similarity=0.181 Sum_probs=72.5
Q ss_pred hhhhhhhHHHHHHHHHHHh---HhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHH
Q psy2772 440 CSVQGQAKEMLENALGSLR---HKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVL 516 (746)
Q Consensus 440 Lq~Lk~DKD~LEsAL~~L~---qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~L 516 (746)
-+.++.+.+..+..+..+. ++|......| ....|..+-..|...-..++.....--.+|+++.. ...+++++..+
T Consensus 42 h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~-~~~~i~~~l~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~ 119 (214)
T 1s35_A 42 HAGIKDEIDGHQDSYQRVKESGEKVIQGQTDP-EYLLLGQRLEGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQA 119 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4445555544443333333 3444433334 35778888888888888888888888888888875 77788888887
Q ss_pred HHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 517 RQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQE 563 (746)
Q Consensus 517 RqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqe 563 (746)
-.-|.++...... .+.+..-...+.-|.+-+++...|..++..
T Consensus 120 ~~Wl~~~E~~l~~----~~~g~~~~~v~~llkkh~~f~~~l~~~~~~ 162 (214)
T 1s35_A 120 EAILSNQEYTLAH----LEPPDSLEAAEAGIRKFEDFLGSMENNRDK 162 (214)
T ss_dssp HHHHHHHHHHHHC----CCCCSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc----ccCCCCHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 7777655433222 133334445566666666666666665543
No 148
>3ter_A Mammalian stromal interaction molecule-1; dimer, metal binding protein; 2.55A {Caenorhabditis elegans}
Probab=30.07 E-value=2.2e+02 Score=26.89 Aligned_cols=62 Identities=15% Similarity=0.150 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHHHhHhhhc---cCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhh
Q psy2772 445 QAKEMLENALGSLRHKMHG---VHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANAR 508 (746)
Q Consensus 445 ~DKD~LEsAL~~L~qqME~---~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaR 508 (746)
++-|+|-.+|....++|+. .+..|.+.+..-+.-.-+|.....++.+-|. ++|..|-..-.|
T Consensus 6 ~Ele~lr~aL~~AE~eLe~~~~~w~~p~~Lq~wLq~T~E~E~q~~~~kk~~Ae--kql~~Ake~~eK 70 (136)
T 3ter_A 6 TEMENLRVQLEEAERRLEANSNGSQAPLALQPLLRRTCENEMAFLEKQRQDCF--KEMKEAIEMVDR 70 (136)
T ss_dssp HHHHHHHHHHHHHHHHHC-----CCCCTTHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcCCCHHHHHHHHHHhHHHHHHHHHccccHH--HHHHHHHHHHHH
Confidence 4667888899999999988 7889999999999999999988888887664 566666555433
No 149
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=30.06 E-value=1.8e+02 Score=28.99 Aligned_cols=77 Identities=18% Similarity=0.125 Sum_probs=52.6
Q ss_pred hhhHHHHHHHHHHHhHhhhccC---C--Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhHH-HH--HHHHHHhhhHHHHH
Q psy2772 444 GQAKEMLENALGSLRHKMHGVH---A--SP-AEVERYRRQQRLLERELSRVRSILAHNSKK-LE--ETVAANARLESELV 514 (746)
Q Consensus 444 k~DKD~LEsAL~~L~qqME~~~---d--qP-a~~EKi~~QQrlLE~eLsrVRaeLSrnSkE-LE--~twaEyaRLE~EV~ 514 (746)
+++.++++++|..++-..-.+. . .| ..++.+..+-..|+.+|..+..+|.+..++ .+ ..|.+|.+.|.++.
T Consensus 195 ~~~~~~v~~il~s~~f~~~~~p~~~~~~~p~~~l~~l~~~i~~l~~~l~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~ 274 (357)
T 3rrk_A 195 RSELEAARSSLSRLGLAELRFPGAYGAMPLGKAAARMKERARLAPEELVGIREEVARLSRESGEALIALWTRAKDEVARY 274 (357)
T ss_dssp GGGHHHHHHHHHTTTCCBCCCCGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeeccCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777888887776643332 2 33 456788888888888888888888888776 33 35666666666666
Q ss_pred HHHHHH
Q psy2772 515 VLRQKL 520 (746)
Q Consensus 515 ~LRqkL 520 (746)
..+..+
T Consensus 275 ~~~~~~ 280 (357)
T 3rrk_A 275 KAVADM 280 (357)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 666554
No 150
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=29.87 E-value=4.2e+02 Score=26.25 Aligned_cols=102 Identities=19% Similarity=0.166 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHH---HHHHHHhhhccCCCCCCCCcchHHHHHH
Q psy2772 470 EVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQ---KLQWSRREVCNGTASLSNGPSVAALEAE 546 (746)
Q Consensus 470 ~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRq---kLQaQr~~~~~~~~~~~~~qekAqLekE 546 (746)
+.+.|......|+..-..+......--..|+++. +|-+.=.|+..+-. .+++++....+ -+.+..-...+.=
T Consensus 81 ~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~-~~~qF~~da~e~e~Wl~~~~e~~~~~~s----~d~g~d~~s~~~L 155 (283)
T 3pe0_A 81 ARPTVESFQAALQTQWSWMLQLCCCIEAHLKENA-AYFQFFSDVREAEGQLQKLQEALRRKYS----CDRSATVTRLEDL 155 (283)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH----SCCCSHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcC----CccCCCHHHHHHH
Confidence 4567777788888877777776666666666654 24444444444444 33344432222 1233222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q psy2772 547 LRRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQ 580 (746)
Q Consensus 547 LwRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~ 580 (746)
|.+-+.+-.+|... ...|.+|.+++..|.+
T Consensus 156 Lkkh~~le~~l~~~----~~~i~~L~~~a~~l~~ 185 (283)
T 3pe0_A 156 LQDAQDEKEQLNEY----KGHLSGLAKRAKAVVQ 185 (283)
T ss_dssp TCCHHHHHHHHHHH----HHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHhhc
Confidence 33333333333333 2467777777777764
No 151
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=29.70 E-value=2.2e+02 Score=22.96 Aligned_cols=53 Identities=21% Similarity=0.350 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 466 ASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 466 dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
-|-+++.+++.-.+.-..+|..-..+|..--.+|+. +.+.|+.|+..||+-|.
T Consensus 9 rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~---~i~~L~~E~~~Lk~ll~ 61 (63)
T 1ci6_A 9 QNKTAATRYRQKKRAEQEALTGECKELEKKNEALKE---RADSLAKEIQYLKDLIE 61 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHh
Confidence 356777788876666666666666666665555654 44677888888887665
No 152
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=29.68 E-value=2.8e+02 Score=26.39 Aligned_cols=18 Identities=11% Similarity=0.165 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHhhhHHH
Q psy2772 482 ERELSRVRSILAHNSKKL 499 (746)
Q Consensus 482 E~eLsrVRaeLSrnSkEL 499 (746)
+.++--+|..|.-.+.||
T Consensus 105 ~kdlEelr~kL~P~~eEL 122 (191)
T 1nfn_A 105 GADMEDVCGRLVQYRGEV 122 (191)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHH
Confidence 334444444433333333
No 153
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=29.64 E-value=60 Score=35.70 Aligned_cols=27 Identities=11% Similarity=0.158 Sum_probs=13.6
Q ss_pred hhhhhhhhHHHHHHHHHHHhHhhhccC
Q psy2772 439 ICSVQGQAKEMLENALGSLRHKMHGVH 465 (746)
Q Consensus 439 kLq~Lk~DKD~LEsAL~~L~qqME~~~ 465 (746)
+|..-++.++..|+...-+..+|.++.
T Consensus 322 ~l~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (575)
T 2i1j_A 322 KLQLEIAARERAEKKQQEYQDRLRQMQ 348 (575)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 333344445555555555555555444
No 154
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=29.46 E-value=2.4e+02 Score=27.13 Aligned_cols=35 Identities=14% Similarity=0.034 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHH
Q psy2772 479 RLLERELSRVRSILAHNSKKLEETVAANARLESEL 513 (746)
Q Consensus 479 rlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV 513 (746)
..|+-|+...+.++...-.++...=.||..|=.-.
T Consensus 99 e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RW 133 (152)
T 3a7p_A 99 ERLNAALISGTIENNVLQQKLSDLKKEHSQLVARW 133 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778899999999999999988888887775544
No 155
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=29.31 E-value=18 Score=31.04 Aligned_cols=29 Identities=0% Similarity=-0.134 Sum_probs=16.1
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhHHHHHHH
Q psy2772 425 RDQIASKLHSRGRNICSVQGQAKEMLENA 453 (746)
Q Consensus 425 r~ce~dKilqelE~kLq~Lk~DKD~LEsA 453 (746)
+.++++|.|++.+..|+.|+.+-|++.+|
T Consensus 41 ~I~eLEk~L~ekd~eI~~LqseLDKfrSV 69 (72)
T 3nmd_A 41 LIDELELELDQKDELIQMLQNELDKYRSV 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45555555555555555555555555443
No 156
>3vlc_E Golgi to ER traffic protein 1; ATPase, membrane protein insertion, ATP binding, membrane PR binding; HET: ADP; 4.50A {Saccharomyces cerevisiae}
Probab=29.14 E-value=48 Score=29.67 Aligned_cols=52 Identities=13% Similarity=0.121 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-----HHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy2772 473 RYRRQQRLLERELSRVRSILAHNS-----KKLEETVAANARLESELVVLRQKLQWSR 524 (746)
Q Consensus 473 Ki~~QQrlLE~eLsrVRaeLSrnS-----kELE~twaEyaRLE~EV~~LRqkLQaQr 524 (746)
+...+|+.|++|+..++.|+...| .+-.+.=+..++|-.|++.++..|.+++
T Consensus 27 ~~~~~~~~lk~E~~~lk~E~~stSaQDEFAKWAKL~Rk~DKl~~ele~l~~~L~s~k 83 (94)
T 3vlc_E 27 ELSKKYLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSEN 83 (94)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHHHHHHTTTHHHHTTTTH
T ss_pred HhHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445678999999999999999988 3333333445555556666665555444
No 157
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A
Probab=29.03 E-value=1.1e+02 Score=35.18 Aligned_cols=60 Identities=15% Similarity=0.071 Sum_probs=46.8
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHhHhhhc--c--CCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2772 435 RGRNICSVQGQAKEMLENALGSLRHKMHG--V--HASPAEVERYRRQQRLLERELSRVRSILAH 494 (746)
Q Consensus 435 elE~kLq~Lk~DKD~LEsAL~~L~qqME~--~--~dqPa~~EKi~~QQrlLE~eLsrVRaeLSr 494 (746)
+.+..+..|.++..+|++.+..+..+|.. | +..++-+++-+.....++.+|..+...|++
T Consensus 797 d~~~~~~rl~k~~~~~~~~~~~~~~~l~~~~f~~~ap~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (862)
T 1gax_A 797 DVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREALSQ 860 (862)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTSSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55666777889999999999999888765 2 355677788777788888888888877765
No 158
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=28.49 E-value=1.5e+02 Score=28.82 Aligned_cols=43 Identities=14% Similarity=0.075 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 479 RLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 479 rlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
+.++.++..++..+....++|+++=..|...-++++.++++++
T Consensus 139 k~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~c~e~e~a~~~~~ 181 (312)
T 3abh_A 139 KEAEDGFRKAQKPWAKKLKEVEAAKKAHHAACKEEKLAISREA 181 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677778888888888888999999999999999998887765
No 159
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=28.37 E-value=1.7e+02 Score=26.39 Aligned_cols=47 Identities=13% Similarity=0.002 Sum_probs=34.2
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhHhhhc----cCCCh---------HHHHHHHHHHH
Q psy2772 433 HSRGRNICSVQGQAKEMLENALGSLRHKMHG----VHASP---------AEVERYRRQQR 479 (746)
Q Consensus 433 lqelE~kLq~Lk~DKD~LEsAL~~L~qqME~----~~dqP---------a~~EKi~~QQr 479 (746)
+..+..+|..|.++.+.|..=...|.-+|++ ...+| .-...+++||.
T Consensus 14 ~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd~~~~~TKVlH~~~NPa~~a~~~~ 73 (100)
T 1go4_E 14 ADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSVARQRL 73 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSCCCTTTEEEEEESSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccCeeeeecCChHHHHHHHH
Confidence 4566777888888888888888888888877 44566 34567777774
No 160
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=28.33 E-value=2.9e+02 Score=30.25 Aligned_cols=23 Identities=4% Similarity=0.042 Sum_probs=10.5
Q ss_pred hhhhhhhhhhh---hhhhhhhHHHHH
Q psy2772 429 ASKLHSRGRNI---CSVQGQAKEMLE 451 (746)
Q Consensus 429 ~dKilqelE~k---Lq~Lk~DKD~LE 451 (746)
+|.+++-++.. |+.|+..-+.|+
T Consensus 88 ~D~L~k~q~~V~~~LqeLe~~l~~ls 113 (464)
T 1m1j_B 88 QTTLLKQEKTVKPVLRDLKDRVAKFS 113 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhHhHHHHHHHHHHHHh
Confidence 55555554433 444444444443
No 161
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=28.19 E-value=49 Score=35.33 Aligned_cols=12 Identities=42% Similarity=0.614 Sum_probs=5.3
Q ss_pred CcccccccCCCC
Q psy2772 603 GVAGKVSKSGLD 614 (746)
Q Consensus 603 ~~~~~~~~~~~~ 614 (746)
++++.|.+.-|-
T Consensus 130 ~~~~~~~~~~l~ 141 (437)
T 4b4t_L 130 GVRNSVDRSKLK 141 (437)
T ss_dssp CBCSSSCTTSCC
T ss_pred ecccccCHhhcC
Confidence 344444444443
No 162
>1xaw_A Occludin; coiled-coil, cell adhesion; 1.45A {Homo sapiens} SCOP: h.4.17.1 PDB: 1wpa_A 3g7c_A
Probab=28.16 E-value=1.1e+02 Score=28.88 Aligned_cols=69 Identities=20% Similarity=0.440 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHH--HHHHHHhhhccCCCCCCCCcchHHHHHHHH
Q psy2772 471 VERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQ--KLQWSRREVCNGTASLSNGPSVAALEAELR 548 (746)
Q Consensus 471 ~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRq--kLQaQr~~~~~~~~~~~~~qekAqLekELw 548 (746)
++.|..+=..|+.+|.+ |.++|.+-..+..||.||+. +|. ..++-. ++| ..|..-|.
T Consensus 68 v~~v~~~F~~Ld~~L~~----l~~~s~e~~~i~~EY~r~k~----~K~dp~y~ekK-~Rc------------~yL~~KLs 126 (140)
T 1xaw_A 68 LDEINKELSRLDKELDD----YREESEEYMAAADEYNRLKQ----VKGSADYKSKK-NHC------------KQLKSKLS 126 (140)
T ss_dssp HHHHHHHHHHHHHHHHH----SCTTSHHHHHHHHHHHHHHH----HHTSHHHHHHH-HHH------------HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----CCCCCHHHHHHHHHHHHHHH----hcCCcHHHHHH-HHH------------HHHHHHHH
Confidence 34444444445555544 23556555566677777654 100 011111 112 24888899
Q ss_pred HHHHHHHHHHHH
Q psy2772 549 RVQALVGDLQRQ 560 (746)
Q Consensus 549 RIQdVvggLsrQ 560 (746)
+|..+|.+..++
T Consensus 127 HIK~lI~~YD~~ 138 (140)
T 1xaw_A 127 HIKKMVGDYDRQ 138 (140)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHhhhcc
Confidence 999999887664
No 163
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=28.09 E-value=1.9e+02 Score=31.66 Aligned_cols=60 Identities=13% Similarity=-0.030 Sum_probs=37.8
Q ss_pred hhhhhhhHH-HHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q psy2772 440 CSVQGQAKE-MLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLE 500 (746)
Q Consensus 440 Lq~Lk~DKD-~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE 500 (746)
|.-+++||. +.|.+-..++.+-.. -+....+-.+-.+.+.|+.++-..|++.-.+||++-
T Consensus 4 i~~ir~~~~~n~~~v~~~~~~R~~~-~~~~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~ 64 (485)
T 3qne_A 4 INAFLVEKGGDPEIIKASQKKRGDS-VELVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIG 64 (485)
T ss_dssp GGGGCGGGTCCHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhccCCCCHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556444 445555555544211 112456667777888899999999988888888764
No 164
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=28.00 E-value=3.1e+02 Score=28.94 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=0.0
Q ss_pred hhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHH
Q psy2772 440 CSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQK 519 (746)
Q Consensus 440 Lq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqk 519 (746)
|.-++++.|.+...|..=.-.. + ...+-.+-.+++.|+.++-..+++--.+||++-+ +=..+...|+..
T Consensus 4 ~~~~r~~~~~~~~~~~~r~~~~----~-~~~~~~~~~~~r~~~~~~~~l~~~~n~~sk~i~~------~~~~~~~~l~~~ 72 (421)
T 1ses_A 4 LKRLRQEPEVFHRAIREKGVAL----D-LEALLALDREVQELKKRLQEVQTERNQVAKRVPK------APPEEKEALIAR 72 (421)
T ss_dssp HHHHHHCHHHHHHHHHHHTCCC----C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS------SCHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHhCCCc----C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hccccHHHHHHH
Q ss_pred HHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q psy2772 520 LQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDL 557 (746)
Q Consensus 520 LQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggL 557 (746)
+.+-.. +-..|+.+++.+++-+..+
T Consensus 73 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~ 97 (421)
T 1ses_A 73 GKALGE-------------EAKRLEEALREKEARLEAL 97 (421)
T ss_dssp HHHHHH-------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-------------HHHHHHHHHHHHHHHHHHH
No 165
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=27.96 E-value=6.4e+02 Score=27.84 Aligned_cols=90 Identities=6% Similarity=0.066 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHH-------HHHHHHHHHHHHHhhhccCCCCCCCCcchHH
Q psy2772 470 EVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLES-------ELVVLRQKLQWSRREVCNGTASLSNGPSVAA 542 (746)
Q Consensus 470 ~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~-------EV~~LRqkLQaQr~~~~~~~~~~~~~qekAq 542 (746)
..+.|..+...|.+.-..++..+.+=-+.|+++..-..++|. ++..+..=|.+.....+.. +.+..-..
T Consensus 444 ~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~----~~g~dl~~ 519 (863)
T 1sjj_A 444 DSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDT----FIVHTIEE 519 (863)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHCC----CCCSSSGG
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch----HhhccHHH
Confidence 457788888889998888988888888889888766654443 2222222233222221111 11222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy2772 543 LEAELRRVQALVGDLQRQRQE 563 (746)
Q Consensus 543 LekELwRIQdVvggLsrQRqe 563 (746)
+|.-|...+.+.++|..+..+
T Consensus 520 ve~ll~kh~~~~~~l~~~~~~ 540 (863)
T 1sjj_A 520 IQGLTTAHEQFKATLPDADKE 540 (863)
T ss_dssp GHHHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHH
Confidence 555566666677777666544
No 166
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=27.71 E-value=1.2e+02 Score=27.95 Aligned_cols=44 Identities=16% Similarity=0.091 Sum_probs=36.7
Q ss_pred hhhhhhhhHHHHHHHHHHHhHhhh----ccCCChHHHHHHHHHHHHHH
Q psy2772 439 ICSVQGQAKEMLENALGSLRHKMH----GVHASPAEVERYRRQQRLLE 482 (746)
Q Consensus 439 kLq~Lk~DKD~LEsAL~~L~qqME----~~~dqPa~~EKi~~QQrlLE 482 (746)
-|..|+++.-..|+.|..++|++. .|.-+|-.+.|-.+|+|..+
T Consensus 23 ~ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e~DPDevNK~tl~~R~~~ 70 (113)
T 4fi5_A 23 TMEELQREINAHEGQLVIARQKVRDAEKQYEKDPDELNKRTLTDREGV 70 (113)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 467788899999999999999865 56678999999999998654
No 167
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=27.37 E-value=5.9e+02 Score=27.14 Aligned_cols=38 Identities=13% Similarity=0.251 Sum_probs=23.0
Q ss_pred hHHHHHHHHHHHhHhhhc--cCCChHHHHHHHHHHHHHHH
Q psy2772 446 AKEMLENALGSLRHKMHG--VHASPAEVERYRRQQRLLER 483 (746)
Q Consensus 446 DKD~LEsAL~~L~qqME~--~~dqPa~~EKi~~QQrlLE~ 483 (746)
+-+.++.-+..|..+|.. ++++|....++.+....|+.
T Consensus 26 ~l~~~~~r~~el~~~~~~p~~w~d~~~~~~~~ke~~~l~~ 65 (365)
T 1gqe_A 26 DYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEA 65 (365)
T ss_dssp THHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHHH
Confidence 344555555666666554 56788887777665555543
No 168
>2uwj_E Type III export protein PSCE; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=27.26 E-value=1.8e+02 Score=25.05 Aligned_cols=57 Identities=21% Similarity=0.250 Sum_probs=42.7
Q ss_pred hhhhhhhhhhhh-----hhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHH
Q psy2772 431 KLHSRGRNICSV-----QGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRV 488 (746)
Q Consensus 431 KilqelE~kLq~-----Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrV 488 (746)
+.|-.||.+|+. -..=+++|..||...+++|.... .|..-+-..+|.+-+|-.|.=|
T Consensus 3 ~mMTnLE~~L~~~~~~~~~~i~~~L~qAl~~vKrqL~~G~-~pqqyQ~~~qQ~~AieAal~Ii 64 (70)
T 2uwj_E 3 HMMTALETRLSVADGTHAAALRQRLQAALAECRRELARGA-CPERFQFLQQQARALEGGLGIL 64 (70)
T ss_dssp TCSSHHHHHHTSSSTHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777776 22347889999999999988766 6888888888888887766543
No 169
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=26.90 E-value=3.7e+02 Score=24.56 Aligned_cols=86 Identities=9% Similarity=0.136 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHH
Q psy2772 471 VERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRV 550 (746)
Q Consensus 471 ~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRI 550 (746)
...|..+-..|+..-..++.....--.+|++++ ++-.+++++..+-.-|..+...... .+.+......+.=|++-
T Consensus 87 ~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~q~l-~l~~F~~d~~~~~~WL~~~e~~L~~----~~~g~s~~~ve~ll~~h 161 (218)
T 3fb2_A 87 SPEIKQKLDILDQERADLEKAWVQRRMMLDQCL-ELQLFHRDCEQAENWMAAREAFLNT----EDKGDSLDSVEALIKKH 161 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCC-----------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCHHHHHHHHHHH
Confidence 456777778888888888888777788899988 5788888888888777765432111 12222333344445555
Q ss_pred HHHHHHHHHHH
Q psy2772 551 QALVGDLQRQR 561 (746)
Q Consensus 551 QdVvggLsrQR 561 (746)
+++...|..+.
T Consensus 162 ~~f~~~l~~~~ 172 (218)
T 3fb2_A 162 EDFDKAINVQE 172 (218)
T ss_dssp CHHHHHHHHHH
T ss_pred HHHHHHHHhhH
Confidence 55555555443
No 170
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=26.74 E-value=4e+02 Score=28.37 Aligned_cols=81 Identities=15% Similarity=0.082 Sum_probs=51.7
Q ss_pred hhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------hHHH-HHHHHHH
Q psy2772 439 ICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHN-----------SKKL-EETVAAN 506 (746)
Q Consensus 439 kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrn-----------SkEL-E~twaEy 506 (746)
++..+++.-+.||..|.. -..+++|....++.+....|+.-+...+...... -.+| |.+-.|.
T Consensus 4 ~l~~~~~r~~el~~~~~~-----p~~~~d~~~~~~~~ke~~~l~~~v~~~~~~~~~~~~~~~~~el~~D~e~~~~a~~e~ 78 (354)
T 3d5a_X 4 KLDRLEEEYRELEALLSD-----PEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLLDDPELKEMAKAER 78 (354)
T ss_dssp HHHHHTHHHHHHHHHTTS-----TTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC-----CchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 444454444444443211 3456889999999888888876555444322211 2333 6678889
Q ss_pred hhhHHHHHHHHHHHHHHH
Q psy2772 507 ARLESELVVLRQKLQWSR 524 (746)
Q Consensus 507 aRLE~EV~~LRqkLQaQr 524 (746)
..|+.++..|...|+.-+
T Consensus 79 ~~l~~~~~~le~~l~~lL 96 (354)
T 3d5a_X 79 EALLARKEALEKELERHL 96 (354)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999888887655
No 171
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=26.72 E-value=2.2e+02 Score=25.84 Aligned_cols=42 Identities=21% Similarity=0.337 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 480 LLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 480 lLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
-+|+.+..+++++-.-++++|..-..+..|-.++..||..|.
T Consensus 41 e~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 41 ELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALK 82 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677777777777777888887888888888877777665
No 172
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=26.43 E-value=4.2e+02 Score=25.15 Aligned_cols=46 Identities=17% Similarity=0.173 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q psy2772 478 QRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWS 523 (746)
Q Consensus 478 QrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQ 523 (746)
-..+++++--....|-..-+.-|.|=+...+||.+|..|-..|...
T Consensus 72 Ed~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~~~ 117 (155)
T 2efr_A 72 EDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQ 117 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444555555555555555443
No 173
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=26.37 E-value=2.5e+02 Score=27.31 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhH
Q psy2772 479 RLLERELSRVRSILAHNSKKLEETVAANARLE 510 (746)
Q Consensus 479 rlLE~eLsrVRaeLSrnSkELE~twaEyaRLE 510 (746)
..++.+|...+++|.+.-.+|+.+-.+|.|++
T Consensus 72 ~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~ 103 (341)
T 3fpp_A 72 KEVEATLMELRAQRQQAEAELKLARVTYSRQQ 103 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555556666666666666655555543
No 174
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=26.34 E-value=41 Score=34.41 Aligned_cols=40 Identities=10% Similarity=0.274 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 482 ERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 482 E~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
++.+.....++...+.+.+...++...+.+||..||..|.
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeEle 92 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVD 92 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444445555555555555555566666666666665
No 175
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=26.12 E-value=1.7e+02 Score=30.75 Aligned_cols=65 Identities=17% Similarity=0.339 Sum_probs=45.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCC
Q psy2772 507 ARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQQIRPG 585 (746)
Q Consensus 507 aRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi~~~ 585 (746)
+-|+.++..|++.+.+-.. .-..++.|+.+++..+-.....|..|-+++..|..+-.... .+||-
T Consensus 6 ~~~~~~~~~l~~~~~~l~~-------------~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnIrV~v-RvRP~ 70 (403)
T 4etp_A 6 AALKEKIAALKEKIAALKE-------------KIKDTELGMKELNEILIKEETVRRTLHNELQELRGNIRVYL-RIRPA 70 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEE-EECCC
T ss_pred HHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEE-EeCCC
Confidence 3455555556555543322 34457888888888888888999999999999988766554 66764
No 176
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=25.94 E-value=1.1e+02 Score=26.51 Aligned_cols=33 Identities=21% Similarity=0.444 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q psy2772 548 RRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQ 580 (746)
Q Consensus 548 wRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~ 580 (746)
.+|++.|..|.+.+.+|...+.-|+++...|..
T Consensus 42 ~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~~ 74 (78)
T 3iv1_A 42 QKLEEMVTRLDQEVAEVDKNIELLKKKDEELSS 74 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468888999999999999999888888766653
No 177
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=25.93 E-value=20 Score=39.44 Aligned_cols=27 Identities=26% Similarity=0.337 Sum_probs=0.0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 536 NGPSVAALEAELRRVQALVGDLQRQRQ 562 (746)
Q Consensus 536 ~~qekAqLekELwRIQdVvggLsrQRq 562 (746)
...++..|+.|+...+..+.-|...++
T Consensus 403 ~~~e~~~l~~~~~~~~~~~~~~~~~~~ 429 (575)
T 2i1j_A 403 EAAERQKLEDEIRAKQEEVSRIQQEVE 429 (575)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777777766666654433
No 178
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=25.70 E-value=4.8e+02 Score=25.51 Aligned_cols=37 Identities=14% Similarity=0.179 Sum_probs=18.3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy2772 538 PSVAALEAELRRVQALVGDLQRQRQELSAQVKQLTEK 574 (746)
Q Consensus 538 qekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~~ 574 (746)
++-...+.++...+.-+..++.+...+..+++++..+
T Consensus 115 ~~~~~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~ 151 (369)
T 4dk0_A 115 DTLNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETN 151 (369)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555544555555555555555554433
No 179
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=25.64 E-value=62 Score=29.04 Aligned_cols=70 Identities=11% Similarity=0.124 Sum_probs=40.4
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhhHHHHH---HHHHHHhHhhhccCCC----hHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 424 SRDQIASKLHSRGRNICSVQGQAKEMLE---NALGSLRHKMHGVHAS----PAEVERYRRQQRLLERELSRVRSILA 493 (746)
Q Consensus 424 Sr~ce~dKilqelE~kLq~Lk~DKD~LE---sAL~~L~qqME~~~dq----Pa~~EKi~~QQrlLE~eLsrVRaeLS 493 (746)
.++..+.+.|..-...|..||+.-.+++ .-..+|++|++-|.++ -++-||+......|+.+|.....+++
T Consensus 9 ~~L~~aEeaL~~kq~~id~lke~~~q~~~~~E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~lq~q~~ 85 (94)
T 3jsv_C 9 QQLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFN 85 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 3444555566666666666666666665 3345677887777755 33445555555555555555444443
No 180
>3zcc_A HAMP, osmolarity sensor protein ENVZ; signaling protein, signal transduction, membrane protein, signalling, chimera; 1.25A {Archaeoglobus fulgidus} PDB: 3zrw_A 3zrv_A 3zrx_A 3zrw_B 2lfr_A 2lfs_A 1joy_A 2l7h_A 2l7i_A 2y20_A 2y21_A 2y0q_A 2y0t_A
Probab=25.61 E-value=2e+02 Score=22.14 Aligned_cols=20 Identities=10% Similarity=-0.110 Sum_probs=9.0
Q ss_pred hhhhhhhhhhhhhhhhhhhh
Q psy2772 427 QIASKLHSRGRNICSVQGQA 446 (746)
Q Consensus 427 ce~dKilqelE~kLq~Lk~D 446 (746)
.|...+...+..-+..|++-
T Consensus 37 dEi~~l~~~~n~m~~~l~~~ 56 (114)
T 3zcc_A 37 DEIGILAKSIERLRRSLKQL 56 (114)
T ss_dssp SHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444433
No 181
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Probab=25.31 E-value=6e+02 Score=28.80 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=41.0
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhhHHHHH---HHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHhhhH
Q psy2772 424 SRDQIASKLHSRGRNICSVQGQAKEMLE---NALGSLRHKMHGVHASPAEVERYRRQQRLLERELS---RVRSILAHNSK 497 (746)
Q Consensus 424 Sr~ce~dKilqelE~kLq~Lk~DKD~LE---sAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLs---rVRaeLSrnSk 497 (746)
+++.+....+|+.|..|+.|++.-|... +.+... +.+.. .+......+.+||..||+.+. .-|.++....+
T Consensus 20 ~~v~~lr~~~q~~e~~ik~Le~~Qe~f~~~yk~~q~~-~~~~~--~~~~~~~~~~~~~~~l~~~~~~l~~~R~e~~~k~~ 96 (596)
T 1bg1_A 20 QHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQ-GDMQD--LNGNNQSVTRQKMQQLEQMLTALDQMRRSIVSELA 96 (596)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CC-----------CCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhh-hhhhh--cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666777775555555444321 222211 11110 001111124455666776544 45888887666
Q ss_pred HHHHHHHHHh--hhHHHHHHHHH
Q psy2772 498 KLEETVAANA--RLESELVVLRQ 518 (746)
Q Consensus 498 ELE~twaEya--RLE~EV~~LRq 518 (746)
++=+.....- -|..||..-|.
T Consensus 97 ~~l~~~~~lq~~ll~~EL~eWKr 119 (596)
T 1bg1_A 97 GLLSAMEYVQKTLTDEELADWKR 119 (596)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 6544333321 13344555553
No 182
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=25.22 E-value=2.7e+02 Score=22.48 Aligned_cols=58 Identities=10% Similarity=-0.039 Sum_probs=41.1
Q ss_pred hhhhhhhHHHHHHHHHHHhHhh---hccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q psy2772 440 CSVQGQAKEMLENALGSLRHKM---HGVHASPAEVERYRRQQRLLERELSRVRSILAHNSK 497 (746)
Q Consensus 440 Lq~Lk~DKD~LEsAL~~L~qqM---E~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSk 497 (746)
|+..+++-+.|..=|......+ +....+|..++....+.+.|++||..-+..+..+..
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~ 64 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQ 64 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 4555666666666666554443 445678889998888889999999888777766543
No 183
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=25.15 E-value=3.3e+02 Score=24.81 Aligned_cols=42 Identities=21% Similarity=0.223 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy2772 480 LLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSR 524 (746)
Q Consensus 480 lLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr 524 (746)
-|.+|+.+.|.+|-+. +-++=..-..|+.-|..|...|.+++
T Consensus 19 ~Lkreie~lk~ele~l---~~E~q~~v~ql~~~i~~Le~eL~e~r 60 (120)
T 3i00_A 19 RLYREISGLKAQLENM---KTESQRVVLQLKGHVSELEADLAEQQ 60 (120)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666555554 22333344556666666666666665
No 184
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=24.89 E-value=63 Score=31.75 Aligned_cols=45 Identities=7% Similarity=0.027 Sum_probs=33.0
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHH
Q psy2772 433 HSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQ 477 (746)
Q Consensus 433 lqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~Q 477 (746)
..+++..+..|.++-+.|++-...+..|++.+-......|.--|+
T Consensus 134 ~~~~~~~~~~L~~e~~~l~~~~~~l~~qlE~~v~~K~~~E~~L~~ 178 (213)
T 1ik9_A 134 IAENQAKNEHLQKENERLLRDWNDVQGRFEKAVSAKEALETDLYK 178 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567788888998888888888888887777776665555544433
No 185
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=24.46 E-value=3.8e+02 Score=23.94 Aligned_cols=43 Identities=14% Similarity=0.291 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 479 RLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 479 rlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
..|+..|..-+..++..--.++.....-..||..|.-|...|.
T Consensus 51 ~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rle 93 (129)
T 2fxo_A 51 NDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLE 93 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444433333333333333444444444433333
No 186
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=24.42 E-value=2e+02 Score=22.76 Aligned_cols=44 Identities=30% Similarity=0.429 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q psy2772 513 LVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQALVGDLQRQRQE 563 (746)
Q Consensus 513 V~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQdVvggLsrQRqe 563 (746)
+..||..||+-.. -| +++.+-+.|++||.-++.-++.|...-|.
T Consensus 2 laalkselqalkk---eg----fspeelaaleselqalekklaalksklqa 45 (48)
T 1g6u_A 2 LAALKSELQALKK---EG----FSPEELAALESELQALEKKLAALKSKLQA 45 (48)
T ss_dssp HHHHHHHHHHHHH---TT----CSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH---cC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888887653 22 46778899999999999888888655443
No 187
>3c98_B Syntaxin-1A; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus}
Probab=24.16 E-value=4.2e+02 Score=24.35 Aligned_cols=33 Identities=3% Similarity=-0.046 Sum_probs=21.6
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHh
Q psy2772 428 IASKLHSRGRNICSVQGQAKEMLENALGSLRHK 460 (746)
Q Consensus 428 e~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qq 460 (746)
+.|+.|.+.-..+..++.+-+.|...+..+...
T Consensus 37 ~~~~~m~ef~~~ve~i~~~i~~i~~~v~el~~~ 69 (279)
T 3c98_B 37 DRDRFMDEFFEQVEEIRGFIDKIAENVEEVKRK 69 (279)
T ss_dssp --CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777777777777766655443
No 188
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=24.11 E-value=1.3e+02 Score=29.91 Aligned_cols=47 Identities=6% Similarity=0.056 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q psy2772 478 QRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSR 524 (746)
Q Consensus 478 QrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr 524 (746)
++.+|+.|-.-+.+++...-|...--.+....+.|+..|+.+|+...
T Consensus 8 K~~~q~ql~~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~ 54 (190)
T 4emc_A 8 KNSVKQQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLN 54 (190)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555554444444444444466666777777666554
No 189
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=23.97 E-value=4e+02 Score=25.53 Aligned_cols=28 Identities=18% Similarity=0.094 Sum_probs=13.3
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q psy2772 498 KLEETVAANARLESELVVLRQKLQWSRR 525 (746)
Q Consensus 498 ELE~twaEyaRLE~EV~~LRqkLQaQr~ 525 (746)
+++....|...|.+++...|-+++.++.
T Consensus 114 kI~aL~~Ei~~Lr~qL~~~R~k~~~em~ 141 (175)
T 3lay_A 114 KINAVAKEMESLGQKLDEQRVKRDVAMA 141 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444555555555553
No 190
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=23.95 E-value=2.8e+02 Score=26.17 Aligned_cols=25 Identities=4% Similarity=0.264 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 497 KKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 497 kELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
.+|+++-.++...+.++..++..|.
T Consensus 98 ~~~~~a~~~~~~a~a~l~~a~a~l~ 122 (277)
T 2f1m_A 98 QEYDQALADAQQANAAVTAAKAAVE 122 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555544444
No 191
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=23.83 E-value=2.8e+02 Score=22.16 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 478 QRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 478 QrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
-..||.+|.++|+++++-..|-+.--+--.+||.|+..-|.-|.
T Consensus 9 i~~le~el~~~r~e~~~q~~eYq~LlniK~~Le~EIatYRkLLE 52 (59)
T 1gk6_A 9 VEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIATYRKLLE 52 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Confidence 34467777777777777777777777777778887777765554
No 192
>2fp1_A Chorismate mutase; alpha-helical, isomerase; 1.55A {Mycobacterium tuberculosis} SCOP: a.130.1.4 PDB: 2f6l_A 2fp2_A* 2ao2_A*
Probab=23.69 E-value=3.5e+02 Score=25.44 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=42.9
Q ss_pred hhhhhhHHHHHHHHHHHhHhhhccCCChHHHHH---------HHHHHHHHHH-------------HHHHHHHHHHhhhHH
Q psy2772 441 SVQGQAKEMLENALGSLRHKMHGVHASPAEVER---------YRRQQRLLER-------------ELSRVRSILAHNSKK 498 (746)
Q Consensus 441 q~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EK---------i~~QQrlLE~-------------eLsrVRaeLSrnSkE 498 (746)
..-.++++.|+++ ++.-+.+.=+|..+++ +.+|+.++.+ +|..||..|.+.+++
T Consensus 35 ~dp~RE~eVL~r~----~~~a~~~gL~~~~i~~ifr~Ii~~S~~~Q~~~~~~w~~~~~~~~~~~~dL~~~R~~ld~l~~~ 110 (166)
T 2fp1_A 35 EDSGRVEQQLAKL----GEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASAPPEPPDLSASRSAIDSLNNR 110 (166)
T ss_dssp CCHHHHHHHHHHH----HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSCSSCCCSHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHH----HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3444555555554 4443444555665544 5677777776 667899999999999
Q ss_pred HHHHHHHHhhh
Q psy2772 499 LEETVAANARL 509 (746)
Q Consensus 499 LE~twaEyaRL 509 (746)
|-.+-+++..+
T Consensus 111 ll~~l~~~~~~ 121 (166)
T 2fp1_A 111 MLSQIWSHWSL 121 (166)
T ss_dssp HHHHHHHTHHH
T ss_pred HHHHHHHHHhh
Confidence 98887766554
No 193
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=23.61 E-value=6.5e+02 Score=27.22 Aligned_cols=98 Identities=19% Similarity=0.183 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCC----CcchHH-HHHH
Q psy2772 472 ERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSN----GPSVAA-LEAE 546 (746)
Q Consensus 472 EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~----~qekAq-LekE 546 (746)
+.+.+||+....+|- +||+.+.+.+..=.+...+=..|+.+...+. ++... ..++.. |-.|
T Consensus 27 d~L~kye~~V~~~l~-----------~L~~~l~~isn~Ts~~~~~v~~ik~~~~~~q---~~~~~n~~~~~q~Skkml~~ 92 (411)
T 3ghg_C 27 DFLSTYQTKVDKDLQ-----------SLEDILHQVENKTSEVKQLIKAIQLTYNPDE---SSKPNMIDAATLKSRKMLEE 92 (411)
T ss_dssp HHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTT---CCCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhccchhhHHH-----------HHHHHHHHHHhhhhHHHHHHHHHHHhhcccc---CCCCcchhhHHHHHHHHHHH
Confidence 345556665555553 5555555555666666666666776654221 11111 122222 5566
Q ss_pred HHHHHHHHH-------HHHHHHHHHHHHHHHHhhhccccccccc
Q psy2772 547 LRRVQALVG-------DLQRQRQELSAQVKQLTEKSNSLSQQIR 583 (746)
Q Consensus 547 LwRIQdVvg-------gLsrQRqeLs~qVrqLt~~s~~l~~qi~ 583 (746)
..|.+.++. .|+.+=......+.+|.++...|.....
T Consensus 93 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~i~~L~~~v~~l~~~~~ 136 (411)
T 3ghg_C 93 IMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQ 136 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666666664 4444444455556667776666665543
No 194
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=23.57 E-value=2.4e+02 Score=23.70 Aligned_cols=20 Identities=25% Similarity=0.225 Sum_probs=9.8
Q ss_pred HHHHHHHHHHhhhHHHHHHH
Q psy2772 497 KKLEETVAANARLESELVVL 516 (746)
Q Consensus 497 kELE~twaEyaRLE~EV~~L 516 (746)
.++...-++++.++.+|..+
T Consensus 56 ~~~~~l~~~l~~~e~eLe~~ 75 (89)
T 2lw1_A 56 EQTQKVLADMAAAEQELEQA 75 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555554443
No 195
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=23.49 E-value=5.8e+02 Score=25.74 Aligned_cols=62 Identities=13% Similarity=0.091 Sum_probs=38.0
Q ss_pred hhhhhhhhhhhhhhhhhhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy2772 428 IASKLHSRGRNICSVQGQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEE 501 (746)
Q Consensus 428 e~dKilqelE~kLq~Lk~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~ 501 (746)
..|.++...-..+..+.++-|.||..+- .. .++ +...+-..|+++|+++|.-|..+-.-|+.
T Consensus 185 lld~ivd~y~~~l~~l~~~id~lE~~v~-------~~-~~~----~~l~~l~~lrr~l~~lrr~l~p~~~vl~~ 246 (363)
T 2iub_A 185 LIDALVDDYFVLLEKIDDEIDVLEEEVL-------ER-PEK----ETVQRTHQLKRNLVELRKTIWPLREVLSS 246 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-------SS-CCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cC-CCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777777777777777777776542 11 122 23344556778888888777765544443
No 196
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=23.39 E-value=2.8e+02 Score=21.96 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=8.6
Q ss_pred hhccCCChHHHHHHHHHH
Q psy2772 461 MHGVHASPAEVERYRRQQ 478 (746)
Q Consensus 461 ME~~~dqPa~~EKi~~QQ 478 (746)
|.++.-+|.+++..+.+=
T Consensus 1 M~~i~v~~~~l~~~A~~~ 18 (97)
T 2vs0_A 1 MAMIKMSPEEIRAKSQSY 18 (97)
T ss_dssp --CBCSCHHHHHHHHHHH
T ss_pred CCCcccCHHHHHHHHHHH
Confidence 344555666655555443
No 197
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=23.16 E-value=82 Score=30.52 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=36.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Q psy2772 539 SVAALEAELRRVQALVGDLQRQRQELSAQVKQLTEKSNSLSQQI 582 (746)
Q Consensus 539 ekAqLekELwRIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi 582 (746)
....|.++..++++.+..|.+++++|..++..|.++...+.+-+
T Consensus 50 ~~~~l~~g~~~L~~~~~~Le~~~~~L~~~i~~l~~~~~k~~e~~ 93 (174)
T 2p22_A 50 FHEIIAIDKNHLRAVEQAIEQTMHSLNAQIDVLTANRAKVQQFS 93 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55668999999999999999999999999999998655555444
No 198
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=22.73 E-value=5.7e+02 Score=26.40 Aligned_cols=45 Identities=11% Similarity=0.207 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHhhhHHHHHHHHHHHH
Q psy2772 477 QQRLLERELSRVRSILAHNS-KKLEETVAANARLESELVVLRQKLQ 521 (746)
Q Consensus 477 QQrlLE~eLsrVRaeLSrnS-kELE~twaEyaRLE~EV~~LRqkLQ 521 (746)
.++..+++...+..++.... ++|+.+-..|....+|++..|++++
T Consensus 113 ~rK~~~~~~~klqk~~~k~~~~~lekaKk~Y~~~cke~e~A~~k~~ 158 (406)
T 4dyl_A 113 LRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYQ 158 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45666777888888888888 8999999999999888888887665
No 199
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=22.66 E-value=1.3e+02 Score=22.34 Aligned_cols=27 Identities=33% Similarity=0.524 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHH
Q psy2772 32 ALEAELRRVQALVGDLQRQRQELSAQV 58 (746)
Q Consensus 32 ~LeseL~Rvq~lVGD~QrQR~eLs~~V 58 (746)
-||.|+|.+|..|-.||..=..|..-|
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~tv 29 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEETV 29 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999998766665444
No 200
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=22.56 E-value=1.6e+02 Score=26.64 Aligned_cols=32 Identities=9% Similarity=0.166 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Q psy2772 551 QALVGDLQRQRQELSAQVKQLTEKSNSLSQQI 582 (746)
Q Consensus 551 QdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi 582 (746)
+++..-|..++.+|.+++.+|...-..|...|
T Consensus 94 ~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i 125 (148)
T 3gpv_A 94 LHRLKLMKQQEANVLQLIQDTEKNLKKIQQKI 125 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555555554444444433
No 201
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=22.33 E-value=5e+02 Score=24.56 Aligned_cols=11 Identities=27% Similarity=0.386 Sum_probs=5.0
Q ss_pred hhhHHHHHHHH
Q psy2772 300 AATLQVISLPF 310 (746)
Q Consensus 300 SASLQDIIRrf 310 (746)
|.+|+.|.++|
T Consensus 48 ak~L~kLa~~~ 58 (305)
T 2efl_A 48 AKQLRNLSKKY 58 (305)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 44444444443
No 202
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=21.77 E-value=72 Score=24.95 Aligned_cols=36 Identities=17% Similarity=0.347 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccC
Q psy2772 549 RVQALVGDLQRQRQELSAQVKQLTEKSNSLSQQIRP 584 (746)
Q Consensus 549 RIQdVvggLsrQRqeLs~qVrqLt~~s~~l~~qi~~ 584 (746)
.+-|+|.+|+.+..+|...+.+|-.|-+.|..++..
T Consensus 6 ~mydlvsel~~r~e~LE~Ri~~LE~KLd~L~~~l~a 41 (43)
T 2pnv_A 6 IMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHA 41 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999988876643
No 203
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=21.73 E-value=5.3e+02 Score=24.57 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHH
Q psy2772 469 AEVERYRRQQRLLERELSRVRSILAHNSKKLEETVAANARLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELR 548 (746)
Q Consensus 469 a~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twaEyaRLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELw 548 (746)
.....|..++..|...-.+++..+..=-.+|+.+. +.-+..+++..+..-|.+.... . +.+.+..-..++.-+.
T Consensus 79 ~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~f~~~~~e~~~Wl~~k~~~--l---~~~~~~d~~~v~~l~~ 152 (323)
T 3edv_A 79 SDAATIAEWKDGLNEAWADLLELIDTRTQILAASY-ELHKFYHDAKEIFGRIQDKHKK--L---PEELGRDQNTVETLQR 152 (323)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHT--C---CCCCCSSHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhh--c---ccccccChHHHHHHHH
Confidence 34677888888898888888888888788899887 6777888888888877765432 1 1233333344455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q psy2772 549 RVQALVGDLQRQRQELSAQVKQLTEKSNSLS 579 (746)
Q Consensus 549 RIQdVvggLsrQRqeLs~qVrqLt~~s~~l~ 579 (746)
+-+.+..+|..... .|.+|.+....|.
T Consensus 153 ~h~~~~~~l~~~~~----~v~~l~~~a~~L~ 179 (323)
T 3edv_A 153 MHTTFEHDIQALGT----QVRQLQEDAARLQ 179 (323)
T ss_dssp HHHHHHHHTHHHHH----HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 55555555544332 3444444444443
No 204
>3zrx_A AF1503 protein, osmolarity sensor protein ENVZ; signaling protein, osmoregulation, OMPR, OMPC; 1.25A {Archaeoglobus fulgidus} PDB: 3zrv_A 3zrw_A 3zrw_B 2lfs_A 2lfr_A 1joy_A 2l7i_A 2y20_A 2l7h_A 2y21_A 2y0t_A 2y0q_A
Probab=21.43 E-value=2.1e+02 Score=21.82 Aligned_cols=6 Identities=17% Similarity=0.069 Sum_probs=2.3
Q ss_pred eecchh
Q psy2772 415 RIGVMI 420 (746)
Q Consensus 415 ~e~d~d 420 (746)
..+|..
T Consensus 22 ~~gdl~ 27 (115)
T 3zrx_A 22 AEGNLE 27 (115)
T ss_dssp HTTCTT
T ss_pred cCCCcc
Confidence 334433
No 205
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=21.29 E-value=6.3e+02 Score=25.33 Aligned_cols=110 Identities=15% Similarity=0.220 Sum_probs=0.0
Q ss_pred hhhhhhhhhhhhhhh----hhhHHHHHHHHHHHhHhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q psy2772 429 ASKLHSRGRNICSVQ----GQAKEMLENALGSLRHKMHGVHASPAEVERYRRQQRLLERELSRVRSILAHNSKKLEETVA 504 (746)
Q Consensus 429 ~dKilqelE~kLq~L----k~DKD~LEsAL~~L~qqME~~~dqPa~~EKi~~QQrlLE~eLsrVRaeLSrnSkELE~twa 504 (746)
.+++-++.++.=..| .+=|++|+.=++.++.++.-| ...+|..|+++..+|-+...
T Consensus 83 ~~~l~~~~eeLr~~L~p~~eelr~kl~~~veelk~~L~Py--------------------~eelr~k~~~~leeLr~~l~ 142 (273)
T 3s84_A 83 ERVLRENADSLQASLRPHADELKAKIDQNVEELKGRLTPY--------------------ADEFKVKIDQTVEELRRSLA 142 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHhH--------------------HHHHHHHHHHHHHHHHHHhh
Q ss_pred HHh----------------hhHHHHHHHHHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHH----HHHHHHHHHHHHH
Q psy2772 505 ANA----------------RLESELVVLRQKLQWSRREVCNGTASLSNGPSVAALEAELRRVQ----ALVGDLQRQRQEL 564 (746)
Q Consensus 505 Eya----------------RLE~EV~~LRqkLQaQr~~~~~~~~~~~~~qekAqLekELwRIQ----dVvggLsrQRqeL 564 (746)
-|+ .|+.-+..|+.+|....+. =+..|..=...|. ..+++|++.=++|
T Consensus 143 P~ae~~~~kl~~~~e~L~~ql~~~a~~L~~~l~~~~ee------------Lr~~L~p~ae~lr~~l~~~~e~l~~~l~~~ 210 (273)
T 3s84_A 143 PYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASAEE------------LRQRLAPLAEDVRGNLRGNTEGLQKSLAEL 210 (273)
T ss_dssp GGCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHTSSSCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q ss_pred HHHHHH
Q psy2772 565 SAQVKQ 570 (746)
Q Consensus 565 s~qVrq 570 (746)
+.+|||
T Consensus 211 ~~~~~q 216 (273)
T 3s84_A 211 GGHLDQ 216 (273)
T ss_dssp HHHHHH
T ss_pred HHHHHH
No 206
>1ek9_A Outer membrane protein TOLC; integral membrane protein, alpha helical barrel, beta barrel; 2.10A {Escherichia coli} SCOP: f.5.1.1 PDB: 1tqq_A 2vde_A 2vdd_A 2wmz_A* 2xmn_A*
Probab=21.22 E-value=5.4e+02 Score=24.91 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2772 552 ALVGDLQRQRQELSAQVKQ 570 (746)
Q Consensus 552 dVvggLsrQRqeLs~qVrq 570 (746)
+++...-.+|-+|..+-.+
T Consensus 211 ~~~~~al~~~p~l~~a~~~ 229 (428)
T 1ek9_A 211 ALLKEAEKRNLSLLQARLS 229 (428)
T ss_dssp HHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHH
Confidence 3344333444444444333
No 207
>3zwh_Q Myosin-9; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} PDB: 2lnk_C
Probab=20.37 E-value=57 Score=25.81 Aligned_cols=26 Identities=23% Similarity=0.458 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Q psy2772 497 KKLEETVAANARLESELVVLRQKLQW 522 (746)
Q Consensus 497 kELE~twaEyaRLE~EV~~LRqkLQa 522 (746)
-|||++-.-+.-+|++|..||.++..
T Consensus 6 rELeEa~Erae~ae~~vnkLR~k~R~ 31 (45)
T 3zwh_Q 6 RELEDATETADAMNREVSSLKNKLRR 31 (45)
T ss_dssp SHHHHHTTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 37899999999999999999999863
No 208
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=20.25 E-value=3.6e+02 Score=25.38 Aligned_cols=11 Identities=36% Similarity=0.519 Sum_probs=4.6
Q ss_pred eeecchhhhhh
Q psy2772 414 IRIGVMIHAIS 424 (746)
Q Consensus 414 i~e~d~d~klS 424 (746)
+..+|+...|.
T Consensus 44 V~kGq~L~~ld 54 (277)
T 2f1m_A 44 IEAGVSLYQID 54 (277)
T ss_dssp ECTTSCSEEEC
T ss_pred ecCCCEEEEEC
Confidence 33444444443
No 209
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=20.11 E-value=4.8e+02 Score=23.49 Aligned_cols=25 Identities=36% Similarity=0.304 Sum_probs=19.3
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHH
Q psy2772 499 LEETVAANARLESELVVLRQKLQWS 523 (746)
Q Consensus 499 LE~twaEyaRLE~EV~~LRqkLQaQ 523 (746)
||+.=.|+...|+.|..-||+|+.-
T Consensus 7 i~eLq~e~~~~E~QL~~A~QKLkdA 31 (96)
T 2ic9_A 7 LKEVQDNITLHEQRLVTTRQKLKDA 31 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566678888888888888888743
Done!