BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2773
(236 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1K7H|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase
pdb|1K7H|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase
Length = 476
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 125/203 (61%), Gaps = 8/203 (3%)
Query: 7 LFASDHLHYNLGAPAS-QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYA 65
LF+ HL L A PTL EMT+ AI +L K++ G+FL VEGG ID HH N R +
Sbjct: 267 LFSYTHLDTVLTRDAEMDPTLPEMTKVAIEMLTKDENGFFLLVEGGRIDHMHHANQIRQS 326
Query: 66 LDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNP 125
L ET+++ +AVS+A+++T ++T+I+VTADH HT+ I+GY+ RN DIL A DL+
Sbjct: 327 LAETLDMEEAVSMALSMTDPEETIILVTADHGHTLTITGYADRNTDILDFAGISDLDDRR 386
Query: 126 YPTLSYANGPA----ARAPVYNATS---RDASFHYPALVPAKDETHGGDDVMVYARGPWS 178
Y L Y +GP Y T +D +F Y + P TH G DV ++ GP++
Sbjct: 387 YTILDYGSGPGYHITEDGKRYEPTEEDLKDINFRYASAAPKHSATHDGTDVGIWVNGPFA 446
Query: 179 HLFTGSYEQNFIPIAMGFASRVG 201
HLFTG YE+N+IP A+ +A+ VG
Sbjct: 447 HLFTGVYEENYIPHALAYAACVG 469
>pdb|1SHN|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase With
Phosphate Bound
pdb|1SHN|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase With
Phosphate Bound
pdb|1SHQ|A Chain A, Crystal Structure Of Shrimp Alkaline Phosphatase With
Magnesium In M3
pdb|1SHQ|B Chain B, Crystal Structure Of Shrimp Alkaline Phosphatase With
Magnesium In M3
Length = 478
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 125/203 (61%), Gaps = 8/203 (3%)
Query: 7 LFASDHLHYNLGAPAS-QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYA 65
LF+ HL L A PTL EMT+ AI +L K++ G+FL VEGG ID HH N R +
Sbjct: 267 LFSYTHLDTVLTRDAEMDPTLPEMTKVAIEMLTKDENGFFLLVEGGRIDHMHHANQIRQS 326
Query: 66 LDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNP 125
L ET+++ +AVS+A+++T ++T+I+VTADH HT+ I+GY+ RN DIL A DL+
Sbjct: 327 LAETLDMEEAVSMALSMTDPEETIILVTADHGHTLTITGYADRNTDILDFAGISDLDDRR 386
Query: 126 YPTLSYANGPA----ARAPVYNATS---RDASFHYPALVPAKDETHGGDDVMVYARGPWS 178
Y L Y +GP Y T +D +F Y + P TH G DV ++ GP++
Sbjct: 387 YTILDYGSGPGYHITEDGKRYEPTEEDLKDINFRYASAAPKHSVTHDGTDVGIWVNGPFA 446
Query: 179 HLFTGSYEQNFIPIAMGFASRVG 201
HLFTG YE+N+IP A+ +A+ VG
Sbjct: 447 HLFTGVYEENYIPHALAYAACVG 469
>pdb|3MK0|A Chain A, Refinement Of Placental Alkaline Phosphatase Complexed
With Nitrophenyl
pdb|3MK1|A Chain A, Refinement Of Placental Alkaline Phosphatase Complexed
With Nitrophenyl
pdb|3MK2|A Chain A, Placental Alkaline Phosphatase Complexed With Phe
pdb|2GLQ|A Chain A, X-Ray Structure Of Human Alkaline Phosphatase In Complex
With Strontium
pdb|1ZEF|A Chain A, Structure Of Alkaline Phosphatase From Human Placenta In
Complex With Its Uncompetitive Inhibitor L-Phe
pdb|1ZEB|A Chain A, X-ray Structure Of Alkaline Phosphatase From Human
Placenta In Complex With 5'-amp
Length = 484
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 112/209 (53%), Gaps = 7/209 (3%)
Query: 1 MTSFKSLFASDHLHYNLGAPAS-QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHN 59
+T LF + Y + ++ P+L EMT A+RLL + +G+FLFVEGG ID HH
Sbjct: 262 VTHLMGLFEPGDMKYEIHRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHE 321
Query: 60 NTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISGYSKRNNDILGAADQK 119
+ AL ET+ A+ A LTSE+DTL +VTADH+H GY R + I G A K
Sbjct: 322 SRAYRALTETIMFDDAIERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGK 381
Query: 120 DLNGNPYPTLSYANGP------AARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYA 173
+ Y L Y NGP AR V + S + + VP +ETH G+DV V+A
Sbjct: 382 ARDRKAYTVLLYGNGPGYVLKDGARPDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFA 441
Query: 174 RGPWSHLFTGSYEQNFIPIAMGFASRVGP 202
RGP +HL G EQ FI M FA+ + P
Sbjct: 442 RGPQAHLVHGVQEQTFIAHVMAFAACLEP 470
>pdb|1EW2|A Chain A, Crystal Structure Of A Human Phosphatase
Length = 513
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 112/209 (53%), Gaps = 7/209 (3%)
Query: 1 MTSFKSLFASDHLHYNLGAPAS-QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHN 59
+T LF + Y + ++ P+L EMT A+RLL + +G+FLFVEGG ID HH
Sbjct: 262 VTHLMGLFEPGDMKYEIHRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHE 321
Query: 60 NTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISGYSKRNNDILGAADQK 119
+ AL ET+ A+ A LTSE+DTL +VTADH+H GY R + I G A K
Sbjct: 322 SRAYRALTETIMFDDAIERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGK 381
Query: 120 DLNGNPYPTLSYANGP------AARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYA 173
+ Y L Y NGP AR V + S + + VP +ETH G+DV V+A
Sbjct: 382 ARDRKAYTVLLYGNGPGYVLKDGARPDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFA 441
Query: 174 RGPWSHLFTGSYEQNFIPIAMGFASRVGP 202
RGP +HL G EQ FI M FA+ + P
Sbjct: 442 RGPQAHLVHGVQEQTFIAHVMAFAACLEP 470
>pdb|1ZED|A Chain A, Alkaline Phosphatase From Human Placenta In Complex With
P- Nitrophenyl-Phosphonate
Length = 484
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 112/209 (53%), Gaps = 7/209 (3%)
Query: 1 MTSFKSLFASDHLHYNLGAPAS-QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHN 59
+T LF + Y + ++ P+L EMT A+RLL + +G+FLFVEGG ID HH
Sbjct: 262 VTHLMGLFEPGDMKYEIHRDSTLDPSLMEMTEAALRLLSRNPRGFFLFVEGGRIDHGHHE 321
Query: 60 NTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISGYSKRNNDILGAADQK 119
+ AL ET+ A+ A LTSE+DTL +VTADH+H GY R + I G A K
Sbjct: 322 SRAYRALTETIMFDDAIERAGQLTSEEDTLSLVTADHSHVFSFGGYPLRGSSIFGLAPGK 381
Query: 120 DLNGNPYPTLSYANGP------AARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYA 173
+ Y L Y NGP AR V + S + + VP +ETH G+DV V+A
Sbjct: 382 ARDRKAYTVLLYGNGPGYVLKDGARPDVTESESGSPEYRQQSAVPLDEETHAGEDVAVFA 441
Query: 174 RGPWSHLFTGSYEQNFIPIAMGFASRVGP 202
RGP +HL G EQ FI M FA+ + P
Sbjct: 442 RGPQAHLVHGVQEQTFIAHVMAFAACLEP 470
>pdb|1KH7|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153gd330n)
pdb|1KH7|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153gd330n)
Length = 449
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID +H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQNHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1KH4|A Chain A, E. Coli Alkaline Phosphatase Mutant (D330n) In Complex
With Phosphate
pdb|1KH4|B Chain B, E. Coli Alkaline Phosphatase Mutant (D330n) In Complex
With Phosphate
pdb|1KH5|A Chain A, E. Coli Alkaline Phosphatase Mutant (D330n) Mimic Of The
Transition States With Aluminium Fluoride
pdb|1KH5|B Chain B, E. Coli Alkaline Phosphatase Mutant (D330n) Mimic Of The
Transition States With Aluminium Fluoride
pdb|1KH9|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153gd330n) Complex
With Phosphate
pdb|1KH9|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153gd330n) Complex
With Phosphate
Length = 449
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID +H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQNHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1KHJ|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Mimic Of
The Transition States With Aluminium Fluoride
pdb|1KHJ|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Mimic Of
The Transition States With Aluminium Fluoride
pdb|1KHK|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n)
pdb|1KHK|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n)
pdb|1KHL|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Complex
With Phosphate
pdb|1KHL|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Complex
With Phosphate
pdb|1KHN|A Chain A, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Zinc Form
pdb|1KHN|B Chain B, E. Coli Alkaline Phosphatase Mutant (D153hd330n) Zinc Form
Length = 449
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID +H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQNHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKD 120
E +TL++VTADHAH I + + A + KD
Sbjct: 355 FAKKEGNTLVIVTADHAHASQIVAPDTKAPGLTQALNTKD 394
>pdb|1HQA|A Chain A, Alkaline Phosphatase (H412q)
pdb|1HQA|B Chain B, Alkaline Phosphatase (H412q)
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1ALJ|A Chain A, Alkaline Phosphatase Mutant (H412n)
pdb|1ALJ|B Chain B, Alkaline Phosphatase Mutant (H412n)
pdb|1ALI|A Chain A, Alkaline Phosphatase Mutant (H412n)
pdb|1ALI|B Chain B, Alkaline Phosphatase Mutant (H412n)
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1URB|A Chain A, Alkaline Phosphatase (N51mg)
pdb|1URB|B Chain B, Alkaline Phosphatase (N51mg)
pdb|1URA|A Chain A, Alkaline Phosphatase (D51zn)
pdb|1URA|B Chain B, Alkaline Phosphatase (D51zn)
Length = 446
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 292 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 351
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 352 FAKKEGNTLVIVTADHAHASQI 373
>pdb|3CMR|A Chain A, E. Coli Alkaline Phosphatase Mutant R166s In Complex With
Phosphate
pdb|3CMR|B Chain B, E. Coli Alkaline Phosphatase Mutant R166s In Complex With
Phosphate
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1AJD|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJD|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJC|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJC|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJB|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJB|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJA|A Chain A, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
pdb|1AJA|B Chain B, Three-Dimensional Structure Of The D153g Mutant Of E. Coli
Alkaline Phosphatase: A Mutant With Weaker Magnesium
Binding And Increased Catalytic Activity
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1ED8|A Chain A, Structure Of E. Coli Alkaline Phosphatase Inhibited By The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED8|B Chain B, Structure Of E. Coli Alkaline Phosphatase Inhibited By The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED9|A Chain A, Structure Of E. Coli Alkaline Phosphatase Without The
Inorganic Phosphate At 1.75a Resolution
pdb|1ED9|B Chain B, Structure Of E. Coli Alkaline Phosphatase Without The
Inorganic Phosphate At 1.75a Resolution
pdb|1EW8|A Chain A, Alkaline Phosphatase (e.c. 3.1.3.1) Complex With
Phosphonoacetic Acid
pdb|1EW8|B Chain B, Alkaline Phosphatase (e.c. 3.1.3.1) Complex With
Phosphonoacetic Acid
pdb|1EW9|A Chain A, Alkaline Phosphatase (E.C. 3.1.3.1) Complex With
Mercaptomethyl Phosphonate
pdb|1EW9|B Chain B, Alkaline Phosphatase (E.C. 3.1.3.1) Complex With
Mercaptomethyl Phosphonate
pdb|1Y6V|A Chain A, Structure Of E. Coli Alkaline Phosphatase In Presence Of
Cobalt At 1.60 A Resolution
pdb|1Y6V|B Chain B, Structure Of E. Coli Alkaline Phosphatase In Presence Of
Cobalt At 1.60 A Resolution
pdb|3TG0|A Chain A, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|B Chain B, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|C Chain C, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
pdb|3TG0|D Chain D, E. Coli Alkaline Phosphatase With Bound Inorganic
Phosphate
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|3DPC|A Chain A, Structure Of E.Coli Alkaline Phosphatase Mutant In Complex
With A Phosphorylated Peptide
pdb|3DPC|B Chain B, Structure Of E.Coli Alkaline Phosphatase Mutant In Complex
With A Phosphorylated Peptide
Length = 455
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1ALK|A Chain A, Reaction Mechanism Of Alkaline Phosphatase Based On
Crystal Structures. Two Metal Ion Catalysis
pdb|1ALK|B Chain B, Reaction Mechanism Of Alkaline Phosphatase Based On
Crystal Structures. Two Metal Ion Catalysis
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|3BDG|B Chain B, Crystal Structure Of Wild-TypeT155V MIXED DIMER OF E. COLI
ALKALINE Phosphatase
Length = 458
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 296 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 355
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 356 FAKKEGNTLVIVTADHAHASQI 377
>pdb|1ELY|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102c)
pdb|1ELY|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102c)
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1ELZ|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102g)
pdb|1ELZ|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102g)
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|3BDF|A Chain A, Crystal Structure Of Metal-Free E. Coli Alkaline
Phosphatase (T155v)
pdb|3BDF|B Chain B, Crystal Structure Of Metal-Free E. Coli Alkaline
Phosphatase (T155v)
pdb|3BDG|A Chain A, Crystal Structure Of Wild-TypeT155V MIXED DIMER OF E. COLI
ALKALINE Phosphatase
Length = 458
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 296 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 355
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 356 FAKKEGNTLVIVTADHAHASQI 377
>pdb|1ELX|A Chain A, E. Coli Alkaline Phosphatase Mutant (S102a)
pdb|1ELX|B Chain B, E. Coli Alkaline Phosphatase Mutant (S102a)
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1B8J|A Chain A, Alkaline Phosphatase Complexed With Vanadate
pdb|1B8J|B Chain B, Alkaline Phosphatase Complexed With Vanadate
pdb|2GA3|A Chain A, Structure Of S102t E. Coli Alkaline Phosphatase-Phosphate
Intermediate At 2.20a Resolution
pdb|2GA3|B Chain B, Structure Of S102t E. Coli Alkaline Phosphatase-Phosphate
Intermediate At 2.20a Resolution
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|2G9Y|A Chain A, Structure Of S102t E. Coli Alkaline Phosphatase In
Presence Of Phosphate At 2.00 A Resolution
pdb|2G9Y|B Chain B, Structure Of S102t E. Coli Alkaline Phosphatase In
Presence Of Phosphate At 2.00 A Resolution
Length = 449
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|3BDH|A Chain A, Crystal Structure Of Zinc-Deficient Wild-Type E. Coli
Alkaline Phosphatase
pdb|3BDH|B Chain B, Crystal Structure Of Zinc-Deficient Wild-Type E. Coli
Alkaline Phosphatase
Length = 458
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 296 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 355
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 356 FAKKEGNTLVIVTADHAHASQI 377
>pdb|2ANH|A Chain A, Alkaline Phosphatase (D153h)
pdb|2ANH|B Chain B, Alkaline Phosphatase (D153h)
Length = 446
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 292 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 351
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 352 FAKKEGNTLVIVTADHAHASQI 373
>pdb|1Y7A|A Chain A, Structure Of D153hK328W E. COLI ALKALINE PHOSPHATASE IN
Presence Of Cobalt At 1.77 A Resolution
pdb|1Y7A|B Chain B, Structure Of D153hK328W E. COLI ALKALINE PHOSPHATASE IN
Presence Of Cobalt At 1.77 A Resolution
Length = 449
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDWQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|1ANI|A Chain A, Alkaline Phosphatase (D153h, K328h)
pdb|1ANI|B Chain B, Alkaline Phosphatase (D153h, K328h)
Length = 446
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 292 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDHQDHAANPCGQIGETVDLDEAVQRALE 351
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 352 FAKKEGNTLVIVTADHAHASQI 373
>pdb|1ANJ|A Chain A, Alkaline Phosphatase (K328h)
pdb|1ANJ|B Chain B, Alkaline Phosphatase (K328h)
Length = 446
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 292 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDHQDHAANPCGQIGETVDLDEAVQRALE 351
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 352 FAKKEGNTLVIVTADHAHASQI 373
>pdb|1ALH|A Chain A, Kinetics And Crystal Structure Of A Mutant E. Coli
Alkaline Phosphatase (Asp-369-->asn): A Mechanism
Involving One Zinc Per Active Site
pdb|1ALH|B Chain B, Kinetics And Crystal Structure Of A Mutant E. Coli
Alkaline Phosphatase (Asp-369-->asn): A Mechanism
Involving One Zinc Per Active Site
Length = 446
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID H P + ETV+L +AV A+
Sbjct: 292 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALE 351
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTA+HAH I
Sbjct: 352 FAKKEGNTLVIVTANHAHASQI 373
>pdb|1HJK|A Chain A, Alkaline Phosphatase Mutant H331q
pdb|1HJK|B Chain B, Alkaline Phosphatase Mutant H331q
Length = 449
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL VEG ID P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVEGASIDKQDQAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|3DYC|A Chain A, Structure Of E322y Alkaline Phosphatase In Complex With
Inorganic Phosphate
pdb|3DYC|B Chain B, Structure Of E322y Alkaline Phosphatase In Complex With
Inorganic Phosphate
Length = 449
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
S PTLA+MT AI LL K +KG+FL V G ID H P + ETV+L +AV A+
Sbjct: 295 SVPTLAQMTDKAIELLSKNEKGFFLQVYGASIDKQDHAANPCGQIGETVDLDEAVQRALE 354
Query: 82 LT-SEKDTLIVVTADHAHTMMI 102
E +TL++VTADHAH I
Sbjct: 355 FAKKEGNTLVIVTADHAHASQI 376
>pdb|3E2D|A Chain A, The 1.4 A Crystal Structure Of The Large And Cold-Active
Vibrio Sp. Alkaline Phosphatase
pdb|3E2D|B Chain B, The 1.4 A Crystal Structure Of The Large And Cold-Active
Vibrio Sp. Alkaline Phosphatase
Length = 502
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 22 SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81
+QP+L EMT+ A+ +L K++ G+FL VEGG ID A H+N L E ++ +A+
Sbjct: 241 TQPSLKEMTQKALNILSKDEDGFFLMVEGGQIDWAGHSNDAGTMLHELLKFDEAIQTVYE 300
Query: 82 LTSEK-DTLIVVTADHAHTMMISGYSKRNNDI 112
++ DT+++VTADH G+S +ND+
Sbjct: 301 WAKDREDTIVIVTADHETGSF--GFSYSSNDL 330
>pdb|3A52|A Chain A, Crystal Structure Of Cold-Active Alkailne Phosphatase From
Psychrophile Shewanella Sp.
pdb|3A52|B Chain B, Crystal Structure Of Cold-Active Alkailne Phosphatase From
Psychrophile Shewanella Sp
Length = 400
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 80/197 (40%), Gaps = 29/197 (14%)
Query: 25 TLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN-LT 83
TL+++T+ ++ LL + +KG+ L VEG ID A HNN A+ E A A+ V +
Sbjct: 198 TLSKLTQKSLDLLSQNEKGFVLLVEGSLIDWAGHNNDIATAMAEMQGFANAIEVVEQYIR 257
Query: 84 SEKDTLIVVTADH--------------AHTMMISGYSKRNNDILG---AADQKDLNGNPY 126
DTL+VVTADH T + G S I AAD D
Sbjct: 258 QHPDTLLVVTADHNTGGLSIGANGEYQWDTKLPKGISASPASIATHAIAAD--DWQAGVN 315
Query: 127 PTLSYANGPAARAPVYNATSRDASFHYPALVPAKD---------ETHGGDDVMVYARGPW 177
L + + NA + S AL D H G DV V+A GP
Sbjct: 316 QQLGFDVNSTELQQLTNARMQGKSTLEVALKKIIDTRSYTGWTTSGHTGVDVQVFAMGPA 375
Query: 178 SHLFTGSYEQNFIPIAM 194
+ LF G+ + I M
Sbjct: 376 ADLFKGNQDNTHIAEKM 392
>pdb|2IUC|B Chain B, Structure Of Alkaline Phosphatase From The Antarctic
Bacterium Tab5
Length = 375
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 43/199 (21%)
Query: 1 MTSFKSLFASDHLHYNLGAPASQPT--------LAEMTRTAIRLLEKEQKGYFLFVEGGH 52
+T F S+ ++ + + L A + PT L+ T AI+ L K+ +F+ EG
Sbjct: 199 LTDFSSIASNRKMGFLL-ADEAMPTMEKGRGNFLSAATDLAIQFLSKDNSAFFIMSEGSQ 257
Query: 53 IDTAHHNNTPRYALDETVELAKAVSVAVNLT-SEKDTLIVVTADHAHTMMISGYSKRNND 111
ID H N Y + E + A+ A+ S+ +TL++VT+DH G++
Sbjct: 258 IDWGGHANNASYLISEINDFDDAIGTALAFAKSDGNTLVIVTSDHE----TGGFT----- 308
Query: 112 ILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMV 171
L A K +G+ Y + GP ++AT L+P V
Sbjct: 309 -LAAKSNKREDGSEYSDYTEI-GPTFSTGGHSAT----------LIP------------V 344
Query: 172 YARGPWSHLFTGSYEQNFI 190
+A GP S F G YE N I
Sbjct: 345 FAYGPGSEEFIGIYENNEI 363
>pdb|2IUC|A Chain A, Structure Of Alkaline Phosphatase From The Antarctic
Bacterium Tab5
Length = 375
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 43/199 (21%)
Query: 1 MTSFKSLFASDHLHYNLGAPASQPT--------LAEMTRTAIRLLEKEQKGYFLFVEGGH 52
+T F S+ ++ + + L A + PT L+ T AI+ L K+ +F+ EG
Sbjct: 199 LTDFSSIASNRKMGFLL-ADEAMPTMESGRGNFLSAATDLAIQFLSKDNSAFFIMSEGSQ 257
Query: 53 IDTAHHNNTPRYALDETVELAKAVSVAVNLTSEK-DTLIVVTADHAHTMMISGYSKRNND 111
ID H N Y + E + A+ A+ + +TL++VT+DH G++
Sbjct: 258 IDWGGHANNASYLISEINDFDDAIGTALAFAKKDGNTLVIVTSDHE----TGGFT----- 308
Query: 112 ILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMV 171
L A K +G+ Y + + GP+ ++AT L+P V
Sbjct: 309 -LAAKKNKREDGSEYSDYT-SIGPSFSTGGHSAT----------LIP------------V 344
Query: 172 YARGPWSHLFTGSYEQNFI 190
+A GP S F G YE N I
Sbjct: 345 FAYGPGSEEFIGIYENNEI 363
>pdb|2W5V|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Mg Bound In The M3 Site.
pdb|2W5V|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Mg Bound In The M3 Site.
pdb|2W5W|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Zn Bound In The M3 Site.
pdb|2W5W|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Asp
With Zn Bound In The M3 Site
Length = 375
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 1 MTSFKSLFASDHLHYNLGAPASQPT--------LAEMTRTAIRLLEKEQKGYFLFVEGGH 52
+T F S+ ++ + + L A + PT L+ T AI+ L K+ +F+ EG
Sbjct: 199 LTDFSSIASNRKMGFLL-ADEAMPTMEKGRGNFLSAATDLAIQFLSKDNSAFFIMSEGSQ 257
Query: 53 IDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKD--TLIVVTADHAHTMMISGYSKRNN 110
ID H N Y + E + A+ A+ ++KD TL++VT+DH G++
Sbjct: 258 IDWGGHANNASYLISEINDFDDAIGTALAF-AKKDGNTLVIVTSDHE----TGGFT---- 308
Query: 111 DILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVM 170
L A K +G+ Y + GP ++AT L+P
Sbjct: 309 --LAAKKNKREDGSEYSDYTEI-GPTFSTGGHSAT----------LIP------------ 343
Query: 171 VYARGPWSHLFTGSYEQNFI 190
V+A GP S F G YE N I
Sbjct: 344 VFAYGPGSEEFIGIYENNEI 363
>pdb|2W5X|A Chain A, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Glu
With Mg Bound In The M3 Site.
pdb|2W5X|B Chain B, Structure Of Tab5 Alkaline Phosphatase Mutant His 135 Glu
With Mg Bound In The M3 Site
Length = 375
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 1 MTSFKSLFASDHLHYNLGAPASQPT--------LAEMTRTAIRLLEKEQKGYFLFVEGGH 52
+T F S+ ++ + + L A + PT L+ T AI+ L K+ +F+ EG
Sbjct: 199 LTDFSSIASNRKMGFLL-ADEAMPTMEKGRGNFLSAATDLAIQFLSKDNSAFFIMSEGSQ 257
Query: 53 IDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKD--TLIVVTADHAHTMMISGYSKRNN 110
ID H N Y + E + A+ A+ ++KD TL++VT+DH G++
Sbjct: 258 IDWGGHANNASYLISEINDFDDAIGTALAF-AKKDGNTLVIVTSDHE----TGGFT---- 308
Query: 111 DILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVM 170
L A K +G+ Y + GP ++AT L+P
Sbjct: 309 --LAAKKNKREDGSEYSDYTEI-GPTFSTGGHSAT----------LIP------------ 343
Query: 171 VYARGPWSHLFTGSYEQNFI 190
V+A GP S F G YE N I
Sbjct: 344 VFAYGPGSEEFIGIYENNEI 363
>pdb|2X98|A Chain A, H.Salinarum Alkaline Phosphatase
pdb|2X98|B Chain B, H.Salinarum Alkaline Phosphatase
Length = 431
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 7 LFASD-HLHYNLG----APASQPTLAEMTRTAIRLLEKE---QKGYFLFVEGGHIDTAHH 58
LF+ + HL Y L +QP L M + LL KG+FL VE G +D A H
Sbjct: 206 LFSQESHLDYYLDRKNDPENTQPNLDAMVDAGVDLLSSAGDPDKGFFLLVESGRVDHAGH 265
Query: 59 NNTPRYALDETVELAKAVSVAVNL-----TSEKDTLIVVTADH 96
N P + E +A VA L T+ + T +V T DH
Sbjct: 266 ANYPA----QVAEQYEATQVAGQLVEYAETTAEPTFLVSTGDH 304
>pdb|3HDT|A Chain A, Crystal Structure Of Putative Kinase From Clostridium
Symbiosum Atcc 14940
pdb|3HDT|B Chain B, Crystal Structure Of Putative Kinase From Clostridium
Symbiosum Atcc 14940
Length = 223
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 28 EMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHN----NTPRYALDETVELAKA 75
E + I+ +EKE+K Y+ + G + + NT + L+ET EL KA
Sbjct: 163 ERAKRRIKKIEKERKEYYKYFTGSEWHSXKNYDLPINTTKLTLEETAELIKA 214
>pdb|1GDH|A Chain A, Crystal Structure Of A Nad-Dependent D-Glycerate
Dehydrogenase At 2.4 Angstroms Resolution
pdb|1GDH|B Chain B, Crystal Structure Of A Nad-Dependent D-Glycerate
Dehydrogenase At 2.4 Angstroms Resolution
Length = 320
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 54 DTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISGYS 106
D H + P+ +DE +E AK+V + +EK V+ + IS YS
Sbjct: 23 DVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYS 75
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 106 SKRNNDILGAADQKDLNGNPYPTLSYANG 134
+ R+ D+ D+ DL+ +P P L+Y NG
Sbjct: 324 ANRDPDVFPDPDRIDLDRDPNPHLAYGNG 352
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 106 SKRNNDILGAADQKDLNGNPYPTLSYANG 134
+ R+ D+ D+ DL+ +P P L+Y NG
Sbjct: 324 ANRDPDVFPDPDRIDLDRDPNPHLAYGNG 352
>pdb|2DHZ|A Chain A, Solution Structure Of The Ra Domain In The Human Link
Guanine Nucleotide Exchange Factor Ii (Link-Gefii)
Length = 120
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 23/126 (18%)
Query: 91 VVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDAS 150
V DH++ + S S DILG+ +K L Y+ PA R + +S
Sbjct: 14 VYMPDHSYVTIRSRLSASVQDILGSVTEK---------LQYSEEPAGREDSLILVAVSSS 64
Query: 151 FHYPALVPAKDETHGGDDVMVYARGPWSHLFTG---SYEQNFIPIAMGFASRVGP-NSKL 206
L P +D + A G SHLF SYE +P+ +V P ++++
Sbjct: 65 GEKVLLQPT-------EDCVFTALGINSHLFACTRDSYEA-LVPLPEEI--QVSPGDTEI 114
Query: 207 AGASGG 212
+G S G
Sbjct: 115 SGPSSG 120
>pdb|2SFA|A Chain A, Serine Proteinase From Streptomyces Fradiae Atcc 14544
Length = 191
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 76 VSVAVNLTSEKDTLIVVTADHAHTMMISGYSKRNN-DILGAADQKDLNGNPYPTLSYANG 134
S+ N+ S +TA H + + Y+ +LG GN Y + ++N
Sbjct: 15 CSLGFNVRSSSGATYALTAGHCTEIASTWYTNSGQTSLLGTRAGTSFPGNDYGLIRHSNA 74
Query: 135 PAA--RAPVYNATSRD 148
AA R +YN + RD
Sbjct: 75 SAADGRVYLYNGSYRD 90
>pdb|3TLY|A Chain A, Microcin C7 Self Immunity Protein Mccf Active Site Mutant
S118aN220AK247A IN THE APO STATE
pdb|3TLY|B Chain B, Microcin C7 Self Immunity Protein Mccf Active Site Mutant
S118aN220AK247A IN THE APO STATE
Length = 371
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 109 NNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDE 162
+N +L D + NP + YA+ A A +Y T +F+ PAL+P+ E
Sbjct: 122 SNSLLPFLDYDAIIANPKIIIGYADTTALLAGIYAKTGL-ITFYGPALIPSFGE 174
>pdb|3TLC|A Chain A, Microcin C7 Self Immunity Protein Mccf In Complex With
Microcin C7 Antibiotic
pdb|3TLC|B Chain B, Microcin C7 Self Immunity Protein Mccf In Complex With
Microcin C7 Antibiotic
Length = 371
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 109 NNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDE 162
+N +L D + NP + YA+ A A +Y T +F+ PAL+P+ E
Sbjct: 122 SNSLLPFLDYDAIIANPKIIIGYADTTALLAGIYAKTGL-ITFYGPALIPSFGE 174
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.130 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,264,882
Number of Sequences: 62578
Number of extensions: 301500
Number of successful extensions: 674
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 593
Number of HSP's gapped (non-prelim): 53
length of query: 236
length of database: 14,973,337
effective HSP length: 96
effective length of query: 140
effective length of database: 8,965,849
effective search space: 1255218860
effective search space used: 1255218860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)