Query psy2773
Match_columns 236
No_of_seqs 136 out of 1273
Neff 6.0
Searched_HMMs 46136
Date Sat Aug 17 00:46:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2773.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2773hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4126|consensus 100.0 2.5E-55 5.4E-60 414.6 17.3 210 2-211 302-523 (529)
2 smart00098 alkPPc Alkaline pho 100.0 3.1E-54 6.8E-59 406.4 16.9 199 2-201 212-419 (419)
3 PF00245 Alk_phosphatase: Alka 100.0 6.4E-53 1.4E-57 398.4 6.8 199 2-200 214-421 (421)
4 COG1785 PhoA Alkaline phosphat 100.0 4.3E-50 9.4E-55 380.1 16.8 198 2-202 255-481 (482)
5 PRK10518 alkaline phosphatase; 100.0 1.5E-49 3.2E-54 378.7 16.9 173 2-201 280-476 (476)
6 cd00016 alkPPc Alkaline phosph 100.0 5.1E-43 1.1E-47 327.7 17.8 173 2-200 206-384 (384)
7 PF01676 Metalloenzyme: Metall 99.6 2.6E-15 5.6E-20 133.2 10.9 120 25-202 124-245 (252)
8 COG3635 Predicted phosphoglyce 99.5 3.7E-13 7.9E-18 125.0 11.6 92 24-178 281-372 (408)
9 PRK12383 putative mutase; Prov 99.4 1.3E-12 2.9E-17 123.4 13.6 122 23-203 268-391 (406)
10 PRK05362 phosphopentomutase; P 99.4 2.2E-12 4.8E-17 121.7 14.3 123 23-203 258-383 (394)
11 TIGR01696 deoB phosphopentomut 99.4 3.4E-12 7.5E-17 119.7 15.0 134 7-203 239-376 (381)
12 COG1015 DeoB Phosphopentomutas 99.4 1.9E-12 4.2E-17 119.9 12.8 123 23-204 261-387 (397)
13 PLN02538 2,3-bisphosphoglycera 99.4 3.3E-12 7E-17 124.4 14.2 143 23-205 402-550 (558)
14 PRK04135 cofactor-independent 99.4 1.8E-12 3.9E-17 122.1 10.9 90 25-179 265-354 (395)
15 PRK04024 cofactor-independent 99.4 2.3E-12 4.9E-17 122.3 10.8 72 24-98 278-349 (412)
16 TIGR00306 apgM 2,3-bisphosphog 99.3 1.2E-11 2.6E-16 116.8 11.0 73 23-98 271-343 (396)
17 TIGR01307 pgm_bpd_ind 2,3-bisp 99.2 1.2E-10 2.7E-15 112.6 14.6 131 23-205 363-494 (501)
18 TIGR02535 hyp_Hser_kinase prop 99.2 6.8E-11 1.5E-15 111.8 10.3 72 24-98 269-343 (396)
19 PRK04200 cofactor-independent 99.2 9.3E-11 2E-15 110.8 10.1 94 24-179 268-363 (395)
20 PRK05434 phosphoglyceromutase; 99.2 3.4E-10 7.3E-15 110.0 13.0 128 24-205 370-499 (507)
21 COG0696 GpmI Phosphoglyceromut 98.8 5.2E-08 1.1E-12 93.4 11.5 130 23-205 370-500 (509)
22 KOG4513|consensus 98.4 3.1E-06 6.7E-11 79.4 10.7 127 26-204 389-522 (531)
23 PF00884 Sulfatase: Sulfatase; 98.1 2.6E-05 5.6E-10 68.2 9.9 130 24-200 151-308 (308)
24 COG3083 Predicted hydrolase of 97.5 0.0022 4.8E-08 62.6 13.7 151 3-205 340-524 (600)
25 PF01663 Phosphodiest: Type I 97.5 0.00016 3.5E-09 65.2 5.6 73 24-98 165-245 (365)
26 PRK13759 arylsulfatase; Provis 97.4 0.00097 2.1E-08 64.5 9.4 89 65-204 270-369 (485)
27 TIGR03417 chol_sulfatase choli 97.4 0.00073 1.6E-08 65.6 8.5 88 65-203 255-349 (500)
28 TIGR02335 hydr_PhnA phosphonoa 97.1 0.0016 3.4E-08 62.1 7.6 62 30-98 177-240 (408)
29 PRK11560 phosphoethanolamine t 97.1 0.0055 1.2E-07 60.8 11.5 35 65-99 434-468 (558)
30 PRK03776 phosphoglycerol trans 97.0 0.012 2.6E-07 60.2 12.9 73 26-98 305-397 (762)
31 COG3119 AslA Arylsulfatase A a 96.9 0.0046 9.9E-08 59.8 9.4 95 64-206 261-364 (475)
32 KOG2125|consensus 96.7 0.0047 1E-07 62.1 7.5 48 51-98 200-253 (760)
33 KOG2126|consensus 96.6 0.0026 5.6E-08 65.2 5.2 46 52-98 216-263 (895)
34 KOG3731|consensus 96.0 0.018 4E-07 55.6 6.6 91 63-203 273-370 (541)
35 PF08665 PglZ: PglZ domain; I 95.8 0.021 4.6E-07 48.1 5.8 53 40-98 111-174 (181)
36 PRK09598 lipid A phosphoethano 95.7 0.095 2.1E-06 51.7 10.7 35 65-99 406-442 (522)
37 TIGR02687 conserved hypothetic 95.0 0.07 1.5E-06 55.5 7.6 68 27-98 556-628 (844)
38 KOG2645|consensus 94.9 0.077 1.7E-06 51.0 7.1 72 25-98 156-236 (418)
39 PRK11598 putative metal depend 94.9 0.35 7.6E-06 48.0 11.8 35 65-99 420-458 (545)
40 PRK12363 phosphoglycerol trans 94.2 0.19 4.1E-06 51.3 8.2 72 27-98 303-394 (703)
41 TIGR03397 acid_phos_Burk acid 94.0 0.19 4.1E-06 49.2 7.5 82 69-202 365-454 (483)
42 PRK10649 hypothetical protein; 93.8 0.92 2E-05 45.3 12.1 35 64-98 428-464 (577)
43 COG1524 Uncharacterized protei 92.0 0.13 2.8E-06 49.1 3.1 57 43-99 218-280 (450)
44 KOG2124|consensus 89.5 1 2.2E-05 46.8 6.9 57 40-98 197-259 (883)
45 PF07394 DUF1501: Protein of u 88.5 2.3 5.1E-05 39.7 8.3 71 26-100 231-305 (392)
46 KOG3867|consensus 85.0 1.2 2.6E-05 44.2 4.4 36 63-98 269-308 (528)
47 COG1368 MdoB Phosphoglycerol t 79.8 4.2 9.1E-05 41.1 6.2 75 22-98 397-493 (650)
48 COG3379 Uncharacterized conser 78.9 8.3 0.00018 37.3 7.4 48 52-99 201-265 (471)
49 PRK13364 protocatechuate 4,5-d 69.0 4.2 9.1E-05 37.0 2.8 31 70-100 31-63 (278)
50 PRK13366 protocatechuate 4,5-d 68.8 5.3 0.00011 36.5 3.4 34 69-102 30-65 (284)
51 PF02995 DUF229: Protein of un 65.1 24 0.00051 34.7 7.3 28 71-98 313-344 (497)
52 PF04185 Phosphoesterase: Phos 64.0 11 0.00024 35.3 4.7 35 166-200 338-375 (376)
53 cd07949 PCA_45_Doxase_B_like_1 62.4 5.8 0.00013 36.0 2.4 33 167-199 180-215 (276)
54 cd07364 PCA_45_Dioxygenase_B S 54.9 13 0.00027 33.8 3.2 31 71-101 32-64 (277)
55 COG4102 Uncharacterized protei 54.6 66 0.0014 30.8 7.9 80 21-104 245-332 (418)
56 cd07369 PydA_Rs_like PydA is a 51.9 16 0.00035 34.2 3.5 30 71-100 30-61 (329)
57 PRK13367 protocatechuate 4,5-d 51.3 15 0.00031 35.7 3.1 34 69-102 30-65 (420)
58 cd07366 3MGA_Dioxygenase Subun 50.0 12 0.00025 35.0 2.2 29 71-99 70-100 (328)
59 cd07950 Gallate_Doxase_N The N 49.1 16 0.00035 33.1 2.9 33 167-199 181-216 (277)
60 PRK13365 protocatechuate 4,5-d 48.6 15 0.00033 33.4 2.7 32 167-199 181-216 (279)
61 PRK13373 putative dioxygenase; 44.9 25 0.00053 33.2 3.5 31 71-101 30-62 (344)
62 PRK13372 pcmA protocatechuate 43.6 22 0.00049 34.6 3.1 34 69-102 177-212 (444)
63 cd07368 PhnC_Bs_like PhnC is a 40.8 28 0.0006 31.5 3.1 26 74-99 33-60 (277)
64 cd07367 CarBb CarBb is the B s 40.5 33 0.00072 30.8 3.6 29 71-99 26-56 (268)
65 PF05991 NYN_YacP: YacP-like N 37.6 33 0.00071 28.6 2.9 75 24-98 22-106 (166)
66 COG0101 TruA Pseudouridylate s 35.1 88 0.0019 28.4 5.4 58 1-61 1-59 (266)
67 PRK13370 mhpB 3-(2,3-dihydroxy 34.3 54 0.0012 30.4 4.0 32 68-99 23-56 (313)
68 PF05763 DUF835: Protein of un 33.5 1.8E+02 0.0039 23.6 6.5 65 23-97 56-121 (136)
69 PRK13363 protocatechuate 4,5-d 32.4 39 0.00084 31.7 2.8 25 74-98 75-101 (335)
70 TIGR03396 PC_PLC phospholipase 26.7 3.9E+02 0.0085 27.7 9.0 37 166-202 389-428 (690)
71 PRK00021 truA tRNA pseudouridi 25.8 1.6E+02 0.0034 26.0 5.3 58 1-61 1-59 (244)
72 PF10126 Nit_Regul_Hom: Unchar 25.0 3E+02 0.0064 21.9 6.1 56 28-93 14-72 (110)
73 COG2194 Predicted membrane-ass 24.2 69 0.0015 32.1 3.0 32 69-100 425-458 (555)
74 cd07365 MhpB_like Subunit B of 24.0 81 0.0018 29.2 3.3 29 71-99 26-56 (310)
75 PF13950 Epimerase_Csub: UDP-g 22.5 64 0.0014 22.6 1.8 21 24-44 42-62 (62)
76 COG3885 Uncharacterized conser 21.8 1.2E+02 0.0027 27.3 3.8 36 64-100 141-176 (261)
77 PRK12434 tRNA pseudouridine sy 21.6 2.2E+02 0.0048 25.2 5.5 58 1-61 1-60 (245)
78 PRK13358 protocatechuate 4,5-d 20.2 1.3E+02 0.0028 26.8 3.7 15 85-99 42-56 (269)
No 1
>KOG4126|consensus
Probab=100.00 E-value=2.5e-55 Score=414.64 Aligned_cols=210 Identities=47% Similarity=0.797 Sum_probs=195.9
Q ss_pred CceEeeecCCCCCcccCCC-CCCCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHH
Q psy2773 2 TSFKSLFASDHLHYNLGAP-ASQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAV 80 (236)
Q Consensus 2 ~~lLGLFa~~~l~y~~dr~-~~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l 80 (236)
++|||||+++||+|++||+ ..+|+|.|||++||++|+++++||||+||||+||+++|.+++..++.|+++||+||+.++
T Consensus 302 ~~LlGLF~~~hm~y~~~rd~~~~PsL~eMte~Al~vL~~~~~GffLfVEGgrID~ghH~~~a~~aL~Et~ef~~Aiq~a~ 381 (529)
T KOG4126|consen 302 DYLLGLFANGHMSYHIDRDPTEQPSLSEMTEKALEVLSKNSKGFFLFVEGGRIDHGHHETDARQALDETLEFDKAIQRAL 381 (529)
T ss_pred ceeeEeccCCCcccccccCcccCCCHHHHHHHHHHHHhhCCCceEEEEecccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999997 778999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCeEEEEeccCCCcceeecccCCcccccccccc-cCCCCCCcccccccCCCCCC----------CCCCccccCCC
Q psy2773 81 NLTSEKDTLIVVTADHAHTMMISGYSKRNNDILGAADQ-KDLNGNPYPTLSYANGPAAR----------APVYNATSRDA 149 (236)
Q Consensus 81 ~~~~~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~-~~~d~~~~~~l~~~~g~~~~----------~~~~~~~~~~~ 149 (236)
++.+++||||||||||+|+++++||+.|+.++++.+.. .+.|+.||.+++|++||++. .++++.+..+.
T Consensus 382 ~~t~~~dTLivvTaDHsh~~s~~GYp~Rg~~i~gla~~~~~~d~~py~~L~YanGp~~~~~y~~~~g~R~~~~~~~~~~~ 461 (529)
T KOG4126|consen 382 ELTSEEDTLIVVTADHSHTFSINGYPLRGSSILGLAPAQHRIDGLPYTTLLYANGPGYNSGYLDEDGQRIDLTAIESKSD 461 (529)
T ss_pred HhcCccCCEEEEecccccceeecCCCcCCCCccccCcccccccCCceeEEEeccCCccccccccccCCcCCchhhccCCc
Confidence 99999999999999999999999999999999999754 56789999999999999765 34444444566
Q ss_pred CCCcccccCCCCCCccCccceeeEEcCCCCCCCCccccchHHHHHHHhcCCCCCccccCCCC
Q psy2773 150 SFHYPALVPAKDETHGGDDVMVYARGPWSHLFTGSYEQNFIPIAMGFASRVGPNSKLAGASG 211 (236)
Q Consensus 150 ~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~f~G~~dnTdI~~~i~~Al~i~~~~~~~~~~~ 211 (236)
++.+|+.|+|++++|+|+||.|||+||++++|+|+++|+.|+++|++|+||++....|...+
T Consensus 462 ~~~~~a~ip~~~~~HggeDV~VfA~Gp~ahlf~Gv~EQs~Iph~MayA~clg~~~~~~~~~~ 523 (529)
T KOG4126|consen 462 DYSFPSAVPLDSETHGGEDVAVFASGPQAHLFTGVMEQSTIPHVMAYAACLGPGYTACDLAD 523 (529)
T ss_pred ceeccccccccCCCcCcceeeEEecccHHhhccchhhhhhHHHHHHHHHhcCCccchhcccc
Confidence 78899999999999999999999999999999999999999999999999999998988754
No 2
>smart00098 alkPPc Alkaline phosphatase homologues.
Probab=100.00 E-value=3.1e-54 Score=406.40 Aligned_cols=199 Identities=43% Similarity=0.726 Sum_probs=181.2
Q ss_pred CceEeeecCCCCCcccCCCCCCCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHH
Q psy2773 2 TSFKSLFASDHLHYNLGAPASQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVN 81 (236)
Q Consensus 2 ~~lLGLFa~~~l~y~~dr~~~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~ 81 (236)
+|+||||+++||||++||+.++|+|+|||++||++|++++||||||||||+|||++|+||+.+++.|+++||+||+.+++
T Consensus 212 ~~llGLF~~~~l~y~~dr~~~~PsL~eMt~~Al~~L~~~~~GFfLmVEgg~ID~a~H~nd~~~~i~E~~~fd~AV~~a~~ 291 (419)
T smart00098 212 DPLLGLFADGDMPYEIDRDSTEPSLAEMTEVAIRLLSKNERGFFLMVEGGRIDHAHHENDACGALHETVDFDQAIQAALE 291 (419)
T ss_pred ceeeeccCccCCCcccccCCCCCCHHHHHHHHHHHhhcCCCceEEEEecccCChhhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999987899999999999999999999999999999999999999999999999999999999999
Q ss_pred hcC-CCCeEEEEeccCCCcceeecccCCcccccccccccCCCCCCcccccccCCCCCC--------CCCCccccCCCCCC
Q psy2773 82 LTS-EKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAAR--------APVYNATSRDASFH 152 (236)
Q Consensus 82 ~~~-~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~--------~~~~~~~~~~~~~~ 152 (236)
|++ ++||||||||||+||+++.||+.+++++++.......++.||. ++|.++|++. .++++++.....|.
T Consensus 292 ~~~~~~dTLiiVTADH~~g~~~~G~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~g~~~~~~~~~~~~~t~~~~~~~~~~ 370 (419)
T smart00098 292 FAKKEDETLVIVTADHSHVGTFGGYSLRGSDIFGLAPSLDADRKPYT-LAYKNGPGYVVKDSNGIRPNVTKAEIGSPEYR 370 (419)
T ss_pred HhhCCCCcEEEEEecCCCcccccccCCCCCccccccccccCCCCHHH-HHHhcCCCcchhhhccccCCCCHHHhhccccc
Confidence 998 7899999999999998888999998888777544445677877 9999998753 45666666666777
Q ss_pred cccccCCCCCCccCccceeeEEcCCCCCCCCccccchHHHHHHHhcCCC
Q psy2773 153 YPALVPAKDETHGGDDVMVYARGPWSHLFTGSYEQNFIPIAMGFASRVG 201 (236)
Q Consensus 153 ~~~~v~~~s~~HTg~dVpv~A~Gp~a~~f~G~~dnTdI~~~i~~Al~i~ 201 (236)
+++.++.....|||+||||||+||+|++|+|++|||+|+++|++|+||+
T Consensus 371 ~~~~~~~~~~~HtG~DV~v~A~GP~a~~f~G~~ent~i~~~m~~a~~~~ 419 (419)
T smart00098 371 AQTAVPLDSETHTGEDVAVFAYGPHAHLFRGVQEQTYIAHVMAYALCLG 419 (419)
T ss_pred cccccccccccccCcceEEEecCCccccCcccccchhHHHHHHHHhcCC
Confidence 7888888899999999999999999999999999999999999999984
No 3
>PF00245 Alk_phosphatase: Alkaline phosphatase; InterPro: IPR001952 This entry represents alkaline phosphatases (3.1.3.1 from EC) (ALP), which act as non-specific phosphomonoesterases to hydrolyse phosphate esters, optimally at high pH. The reaction mechanism involves the attack of a serine alkoxide on a phosphorus of the substrate to form a transient covalent enzyme-phosphate complex, followed by the hydrolysis of the serine phosphate. Alkaline phosphatases are found in all kingdoms of life, with the exception of some plants. Alkaline phosphatases are metalloenzymes that exist as a dimer, each monomer binding metal ions. The metal ions they carry can differ, although zinc and magnesium are the most common. For example, Escherichia coli alkaline phosphatase (encoded by phoA) requires the presence of two zinc ions bound at the M1 and M2 metal sites, and one magnesium ion bound at the M3 site []. However, alkaline phosphatases from Thermotoga maritima and Bacillus subtilis require cobalt for maximal activity []. In mammals, there are four alkaline phosphatase isozymes: placental, placental-like (germ cell), intestinal and tissue-nonspecific (liver/bone/kidney). All four isozymes are anchored to the outer surface of the plasma membrane by a covalently attached glycosylphosphatidylinositol (GPI) anchor []. Human alkaline phosphatases have four metal binding sites: two for zinc, one for magnesium, and one for calcium ion. Placental alkaline phosphatase (ALPP or PLAP) is highly polymorphic, with at least three common alleles []. Its activity is down-regulated by a number of effectors such as l-phenylalanine, 5'-AMP, and by p-nitrophenyl-phosphonate (PNPPate) []. The placental-like isozyme (ALPPL or PLAP-like) is elevated in germ cell tumours. The intestinal isozyme (ALPI or IAP) has the ability to detoxify lipopolysaccharide and prevent bacterial invasion across the gut mucosal barrier []. The tissue-nonspecific isozyme (ALPL) is, and may play a role in skeletal mineralisation. Defects in ALPL are a cause of hypophosphatasia, including infantile-type (OMIM:241500), childhood-type (OMIM:241510) and adult-type (OMIM:146300). Hhypophosphatasia is an inherited metabolic bone disease characterised by defective skeletal mineralisation []. This entry also contains the related enzyme streptomycin-6-phosphate phosphatase (3.1.3.39 from EC) (encoded by strK) from Streptomyces species. This enzyme is involved in the synthesis of the antibiotic streptomycin, specifically cleaving both streptomycin-6-phosphate and, more slowly, streptomycin-3-phosphate [].; GO: 0016791 phosphatase activity, 0008152 metabolic process; PDB: 1AJD_B 1ALH_B 2ANH_B 3BDF_A 1ELZ_B 1ELX_B 1B8J_B 2GA3_A 1ANJ_B 1Y6V_B ....
Probab=100.00 E-value=6.4e-53 Score=398.42 Aligned_cols=199 Identities=41% Similarity=0.616 Sum_probs=161.4
Q ss_pred CceEeeecCCCCCcccCCC-CCCCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHH
Q psy2773 2 TSFKSLFASDHLHYNLGAP-ASQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAV 80 (236)
Q Consensus 2 ~~lLGLFa~~~l~y~~dr~-~~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l 80 (236)
+|+||||+++||||++||+ .++|+|+|||++||++|++++||||||||||+|||+||+||+.+++.|+++||+||+.++
T Consensus 214 ~~~lGlf~~~~~~~~~~~~~~~~PsL~eMt~~Al~~L~~~~~GFfLmVEg~~ID~a~H~nd~~~~i~E~~~fD~AV~~a~ 293 (421)
T PF00245_consen 214 DPLLGLFADSHMPYEIDRDNSDQPSLAEMTEKALEVLSKNPKGFFLMVEGGRIDWAGHANDAARAIEETLEFDDAVKVAL 293 (421)
T ss_dssp SEEEEEESSSS---HHCCCTTTSTHHHHHHHHHHHHHTTSTT-EEEEEEETHHHHHHHTT-HHHHHHHHHHHHHHHHHHH
T ss_pred ceeeccccccccccccccCCCCCCCHHHHHHHHHHHHhhCCCCcEEEecccchhhhhhhchHHHHHHHHHHHHHHHHHHH
Confidence 5799999999999999876 779999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcC-CCCeEEEEeccCCCcceeecccCCccccccccccc-CCCCCCcccccccCCCCCC-CCCCcc-----ccCCCCCC
Q psy2773 81 NLTS-EKDTLIVVTADHAHTMMISGYSKRNNDILGAADQK-DLNGNPYPTLSYANGPAAR-APVYNA-----TSRDASFH 152 (236)
Q Consensus 81 ~~~~-~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~-~~d~~~~~~l~~~~g~~~~-~~~~~~-----~~~~~~~~ 152 (236)
+|++ ++||||||||||+||+++++|+.+...+.+..... ..++.++..+.|.++++.. .+-... +.....+.
T Consensus 294 ~~~~~~~~TLiIVTADHetg~~~~~~~~~~~~~~~l~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (421)
T PF00245_consen 294 DFAEKDDDTLIIVTADHETGLTIGGYPDYGWDIEGLANQKASSDGLPYTILSYANGPGYNVEDGTRPDVNLSDAIGPILS 373 (421)
T ss_dssp HHHHHCSSEEEEEEESSEESEEEBSCCBTTSBTCSCCCCES-TTCCCCHHCEESSCCHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHhccCCCeEEEEEecccCccccCCcccCCCChhhhhhhhhhhhhhhhhhhhhccchhhhhhcccccccchhhhhcccee
Confidence 9995 78999999999999999999988877776665433 3567788878888876542 000000 00001123
Q ss_pred cccccCCCCCCccCccceeeEEcCCCCCCCCccccchHHHHHHHhcCC
Q psy2773 153 YPALVPAKDETHGGDDVMVYARGPWSHLFTGSYEQNFIPIAMGFASRV 200 (236)
Q Consensus 153 ~~~~v~~~s~~HTg~dVpv~A~Gp~a~~f~G~~dnTdI~~~i~~Al~i 200 (236)
.++.++|++++||++||||||+||+|++|+|++|||+|+++|++||||
T Consensus 374 ~~a~vgwtt~~HTg~dV~v~A~Gp~a~~f~G~~dNT~I~~~m~~algl 421 (421)
T PF00245_consen 374 QRAGVGWTTGGHTGEDVPVYAYGPGAELFRGVYDNTDIAKKMAEALGL 421 (421)
T ss_dssp HHHTCB-SSSSEE-S-EEEEEESTTGGGGSSEEETTHHHHHHHHHHT-
T ss_pred cccccCCcCCCCCCcceeEEEECCCcccCCCceehHHHHHHHHHHhCc
Confidence 467889999999999999999999999999999999999999999996
No 4
>COG1785 PhoA Alkaline phosphatase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-50 Score=380.09 Aligned_cols=198 Identities=34% Similarity=0.483 Sum_probs=159.1
Q ss_pred CceEeeecCCCCCcccCCCCC---CCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHH
Q psy2773 2 TSFKSLFASDHLHYNLGAPAS---QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSV 78 (236)
Q Consensus 2 ~~lLGLFa~~~l~y~~dr~~~---~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~ 78 (236)
+||||||+++||||++||+.. +|+|+|||++||++|++++||||||||||+|||++|+||+.+.++|+++||+||+.
T Consensus 255 ~klLGLFa~~~~~~~~DR~~~~~~~PsLaeMt~kAi~~L~kn~~GFFLMVEGg~ID~a~Hand~~~~i~e~~~fd~Avq~ 334 (482)
T COG1785 255 DKLLGLFADGHLPPNLDRDRDPNDEPSLAEMTEKAIDLLSKNKKGFFLMVEGGRIDWAGHANDPAGAIGETVAFDEAVQA 334 (482)
T ss_pred CceEEeccCCCCCcccccCccccCCCcHHHHHHHHHHHhccCCCceEEEEeccccchhhcCcCHHHHHHHHHHHHHHHHH
Confidence 589999999999999999833 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcC-CCCeEEEEeccCCCcceeec----ccCCccccccccccc------CCCCCCcccccccCCCCCCCCCCccccC
Q psy2773 79 AVNLTS-EKDTLIVVTADHAHTMMISG----YSKRNNDILGAADQK------DLNGNPYPTLSYANGPAARAPVYNATSR 147 (236)
Q Consensus 79 ~l~~~~-~~dTLivvTaDH~~gltl~g----y~~~~~~~~~~~~~~------~~d~~~~~~l~~~~g~~~~~~~~~~~~~ 147 (236)
+++|++ +++|||||||||+||+.++| |.++.+++.+..... ..+| ......+.+..++. +++++.+
T Consensus 335 al~fA~k~~~TLVIvTADH~tgg~~ig~~~~y~~~~~pi~~~~~t~~~~a~~~~~g-~~~~~~~~~~~g~~--~td~~~k 411 (482)
T COG1785 335 ALDFAEKDGNTLVIVTADHETGGLTIGRDGVYEWKPDPIKNAKHTGLGLAKKIADG-AHLPDVYGNYTGIE--LTDETPK 411 (482)
T ss_pred HHHHHhcCCCeEEEEeccccCCceecCCCCccccCCCcccccccchhhHHHHhhcC-Cchhhhhccccccc--ccccchH
Confidence 999998 46899999999999766666 888888875443110 0111 11112222222221 2222211
Q ss_pred C--------C-------CCCcccccCCCCCCccCccceeeEEcCCCCCCCCccccchHHHHHHHhcCCCC
Q psy2773 148 D--------A-------SFHYPALVPAKDETHGGDDVMVYARGPWSHLFTGSYEQNFIPIAMGFASRVGP 202 (236)
Q Consensus 148 ~--------~-------~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~f~G~~dnTdI~~~i~~Al~i~~ 202 (236)
. . -....+.++|++.+|||+|||||||||+|+.|+|++|||+|++.|+.+|++..
T Consensus 412 ~~~~~~~~~~~~~~~~~i~~~~~~~g~tt~~HtG~dVpi~A~Gpgae~f~G~~DnTei~~~i~~al~~~~ 481 (482)
T COG1785 412 EIEEALNAPNSIDIIGAIISERALIGWTTHGHTGEDVPIFAYGPGAENFRGVMDNTEIFQAIAAALGLSL 481 (482)
T ss_pred HHHHhhcCCccccccccceeeecccCCCCCCccCceeeeeeecCccccccccccchHHHHHHHHHhccCc
Confidence 0 0 01235678999999999999999999999999999999999999999999864
No 5
>PRK10518 alkaline phosphatase; Provisional
Probab=100.00 E-value=1.5e-49 Score=378.67 Aligned_cols=173 Identities=34% Similarity=0.487 Sum_probs=154.1
Q ss_pred CceEeeecCCCCCcccCCC----------------------CCCCCHHHHHHHHHHHHHhcCCeEEEEeecccccccccc
Q psy2773 2 TSFKSLFASDHLHYNLGAP----------------------ASQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHN 59 (236)
Q Consensus 2 ~~lLGLFa~~~l~y~~dr~----------------------~~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~ 59 (236)
+|+||||+++||||++||. .++|+|+|||++||++|++++||||||||||+|||++|+
T Consensus 280 ~~lLGLF~~~~m~y~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~PsLaeMT~kAI~~Lskn~~GFFLmVEGg~ID~a~H~ 359 (476)
T PRK10518 280 KPLLGLFADGNMPVRWLGPKATYHGNLDKPPVTCTPNPQRTADVPTLAQMTDKAIDLLKKNEKGFFLQVEGASIDKQDHA 359 (476)
T ss_pred CeEEEecccCCCcchhhccccccccccccccccccccccccCCCCCHHHHHHHHHHHhccCCCceEEEeeccccchhhcc
Confidence 4899999999999999862 457999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEeccCCCcceeecccCCccccccccc-ccCCCCCCcccccccCCCCC
Q psy2773 60 NTPRYALDETVELAKAVSVAVNLTSE-KDTLIVVTADHAHTMMISGYSKRNNDILGAAD-QKDLNGNPYPTLSYANGPAA 137 (236)
Q Consensus 60 ~d~~~~~~e~~~~D~av~~~l~~~~~-~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~-~~~~d~~~~~~l~~~~g~~~ 137 (236)
||+++++.|+++||+||+.+++|++. +||||||||||+|++++.| +.+.++ +... ..+.||.++ +++|+++|+
T Consensus 360 nda~~~i~E~~~fD~AV~~A~~~~~~~~dTLVIVTADH~h~~~i~g-~~~~~~--g~~~~~~~~dg~~~-~l~y~~g~g- 434 (476)
T PRK10518 360 ANPCGQIGETVDLDEAVQKALEFARKDGNTLVIVTADHAHSSQIIA-PDAKAP--GLTQALNTKDGAVM-VVSYGNSEE- 434 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEccCCCcceecC-CCCCCC--CcccccccCCCCee-EEEeccCCC-
Confidence 99999999999999999999999985 8999999999999998887 555444 3322 223578775 788998864
Q ss_pred CCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCCCCCCccccchHHHHHHHhcCCC
Q psy2773 138 RAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSHLFTGSYEQNFIPIAMGFASRVG 201 (236)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~f~G~~dnTdI~~~i~~Al~i~ 201 (236)
.+.+|||+||||||+||+|++|.|++|||+||++|++|+|+.
T Consensus 435 ----------------------~s~~HtG~dV~v~A~GP~A~~f~G~~eqt~if~~m~~Al~~~ 476 (476)
T PRK10518 435 ----------------------DSQEHTGTQLRIAAYGPHAANVVGLTDQTDLFYTMKDALGLK 476 (476)
T ss_pred ----------------------CCcCcCCceeEEEecCCcccccccceeccHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999999999984
No 6
>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.
Probab=100.00 E-value=5.1e-43 Score=327.75 Aligned_cols=173 Identities=49% Similarity=0.763 Sum_probs=156.8
Q ss_pred CceEeeecCCCCCcccCCC---CCCCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHH
Q psy2773 2 TSFKSLFASDHLHYNLGAP---ASQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSV 78 (236)
Q Consensus 2 ~~lLGLFa~~~l~y~~dr~---~~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~ 78 (236)
+|+||||+++||||.+||. .++|+|++|+++||++|+++++|||||||+++|||+||++|+.++++++++||++|+.
T Consensus 206 ~k~lglF~~~~l~~~~~r~~~~~~~psL~emt~~al~~L~~~~~gFfl~ve~~~iD~~gH~~d~~~~~~~l~~~D~av~~ 285 (384)
T cd00016 206 DKLLGLFADSHLPYELDRDPFGKGEPSLAEMTEKAIDVLSKNPNGFFLMVEGGRIDHAHHANDAAGALSETLAFDDAVEA 285 (384)
T ss_pred CcEEEEeCCCCCChhhccCccccCCCCHHHHHHHHHHHHHhcCCcEEEEEeCCCCCcccCCCcHHHHHHHHHHHHHHHHH
Confidence 5999999999999999996 5789999999999999999889999999999999999999999999999999999999
Q ss_pred HHHhcC-CCCeEEEEeccCCCcceeecccCCccccccc--ccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCccc
Q psy2773 79 AVNLTS-EKDTLIVVTADHAHTMMISGYSKRNNDILGA--ADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPA 155 (236)
Q Consensus 79 ~l~~~~-~~dTLivvTaDH~~gltl~gy~~~~~~~~~~--~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 155 (236)
++++++ ++||||||||||||+..+.||+.+.+.+++. ......++.||++++|.+
T Consensus 286 ~l~~l~~~~dTLiIvTADHg~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~---------------------- 343 (384)
T cd00016 286 ALDFAKKDGDTLVVVTADHSHGGTILGYAGRGNPILGLADAPELDVDGLPYTTLTYAN---------------------- 343 (384)
T ss_pred HHHHhhCCCCeEEEEECCCCCCccccCCCCCCCcccccccccccccCCCCceEEEecC----------------------
Confidence 999997 6789999999999987888898888777665 233445677777766542
Q ss_pred ccCCCCCCccCccceeeEEcCCCCCCCCccccchHHHHHHHhcCC
Q psy2773 156 LVPAKDETHGGDDVMVYARGPWSHLFTGSYEQNFIPIAMGFASRV 200 (236)
Q Consensus 156 ~v~~~s~~HTg~dVpv~A~Gp~a~~f~G~~dnTdI~~~i~~Al~i 200 (236)
++++||++||||||+||+|++|.|++|||+|+++|++++||
T Consensus 344 ----~~~~Htg~~Vpv~a~Gp~a~~f~g~~ent~I~~~i~~al~~ 384 (384)
T cd00016 344 ----TTGTHGGEDVPVFAYGPGSHLFRGVMENTEIAHVMAYALGL 384 (384)
T ss_pred ----CCCCCcCceeeEEeecCCccccCcceecHHHHHHHHHHhcC
Confidence 68899999999999999999999999999999999999996
No 7
>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases. This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....
Probab=99.62 E-value=2.6e-15 Score=133.21 Aligned_cols=120 Identities=20% Similarity=0.245 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcceeec
Q psy2773 25 TLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISG 104 (236)
Q Consensus 25 sL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gltl~g 104 (236)
+-.+.++++++.|.+.+.+ |++++-..+|.+||++|++.+++.++.+|+.|+.+++.++.++++|||||||||..
T Consensus 124 ~~~~~~~~~~~~l~~~~~~-~v~~~~~~~D~~GH~~~~~~~~~~ie~~D~~l~~l~~~~~~~~~~liiTaDHg~~~---- 198 (252)
T PF01676_consen 124 SAKEIAEAAIEALKKDKYD-FVFVHVKGTDEAGHRGDPEAYIEAIERIDRFLGRLLEALDKEDDLLIITADHGNDE---- 198 (252)
T ss_dssp THHHHHHHHHHHHHHTTSS-EEEEEEEHHHHHHTTT-HHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEESSBSTT----
T ss_pred hhHHHHHHHHHhhhcccCC-eEEEeecCcchhhccCCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCcc----
Confidence 3466799999999554333 46666668999999999999999999999999999998866789999999999811
Q ss_pred ccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCC--CCC
Q psy2773 105 YSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSH--LFT 182 (236)
Q Consensus 105 y~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~--~f~ 182 (236)
.+....||.++||+.++||+.. .+.
T Consensus 199 -----------------------------------------------------~~~~~~Ht~~~VPll~~g~~~~~~~~~ 225 (252)
T PF01676_consen 199 -----------------------------------------------------TMGHTSHTREPVPLLIYGPGVRGDSVG 225 (252)
T ss_dssp -----------------------------------------------------TSBSSS-B-B-EEEEEECTTEEE-SC-
T ss_pred -----------------------------------------------------ccCCcCCCCceEEEEEEeCCCccCccC
Confidence 1334679999999999999743 455
Q ss_pred CccccchHHHHHHHhcCCCC
Q psy2773 183 GSYEQNFIPIAMGFASRVGP 202 (236)
Q Consensus 183 G~~dnTdI~~~i~~Al~i~~ 202 (236)
...+.++|+..|...+|+..
T Consensus 226 ~~~~~~di~~ti~~~~G~~~ 245 (252)
T PF01676_consen 226 EFGELADIAPTILELLGLEL 245 (252)
T ss_dssp STSBCGHHHHHHHHHHTGGH
T ss_pred cCCEEehHHHHHHHHcCCCc
Confidence 66788999999999998754
No 8
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=99.47 E-value=3.7e-13 Score=125.05 Aligned_cols=92 Identities=23% Similarity=0.373 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcceee
Q psy2773 24 PTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMIS 103 (236)
Q Consensus 24 PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gltl~ 103 (236)
-.+.+.+++|++.|++++ .||++||+ +|.+||++|++.+++.++++|+++..+++ ++.+++.|+||+||+|
T Consensus 281 tn~~~k~k~a~eal~~yD-fv~vhik~--tDeagHdG~~e~Kv~~IE~iD~~i~pll~-~~~~~~~i~vt~DHsT----- 351 (408)
T COG3635 281 TNYRGKAKAAIEALKEYD-FVFVHIKA--TDEAGHDGDFEGKVRVIEDIDKAIGPLLD-LDLDEDVIAVTGDHST----- 351 (408)
T ss_pred ccHHHHHHHHHHHHhhCC-EEEEEecc--CccccCCCCHHHhHHHHHHHHHHhhhhhc-cccCCcEEEEeCCCCC-----
Confidence 468999999999998655 99999995 99999999999999999999999999998 7777899999999998
Q ss_pred cccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCC
Q psy2773 104 GYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWS 178 (236)
Q Consensus 104 gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a 178 (236)
|+.-..||++|||+.-|+|..
T Consensus 352 ------------------------------------------------------Pv~vk~Hs~dPVPili~~~~v 372 (408)
T COG3635 352 ------------------------------------------------------PVSVKDHSGDPVPILIYGPYV 372 (408)
T ss_pred ------------------------------------------------------cccccccCCCCccEEEecCCc
Confidence 577789999999999999974
No 9
>PRK12383 putative mutase; Provisional
Probab=99.44 E-value=1.3e-12 Score=123.40 Aligned_cols=122 Identities=10% Similarity=0.044 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCccee
Q psy2773 23 QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMI 102 (236)
Q Consensus 23 ~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gltl 102 (236)
..+..+.+.++++.|++...+| +++--..+|.+||++|++.+.+.++++|+.+..+++.++ ++++||+||||||..
T Consensus 268 ~~~t~~~~~~~l~aL~~~~~dl-vfvnl~~~D~~GH~~d~~~y~~aiE~iD~~lg~ll~~L~-~~~lliITaDHG~d~-- 343 (406)
T PRK12383 268 LVDTQRVMDITLDEFNTHPTAF-ICTNIQETDLAGHAEDVARYAERLEVVDRNLARLLEAMT-PDDCLVVMADHGNDP-- 343 (406)
T ss_pred cCCHHHHHHHHHHHHhcCCCCE-EEEeccCCccccccCCHHHHHHHHHHHHHHHHHHHHHhc-cCCEEEEEcCCCCCC--
Confidence 3567799999999998753343 444445799999999999999999999999999998765 578999999999710
Q ss_pred ecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCCC--
Q psy2773 103 SGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSHL-- 180 (236)
Q Consensus 103 ~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~-- 180 (236)
.|..+.||.++||+.++||+...
T Consensus 344 -------------------------------------------------------~~~~t~HTre~VPlLi~gp~i~~~~ 368 (406)
T PRK12383 344 -------------------------------------------------------TIGHSHHTREVVPLLVYQKGLQATQ 368 (406)
T ss_pred -------------------------------------------------------CCCCcCCCCcceEEEEEECCccccc
Confidence 14455799999999999998543
Q ss_pred CCCccccchHHHHHHHhcCCCCC
Q psy2773 181 FTGSYEQNFIPIAMGFASRVGPN 203 (236)
Q Consensus 181 f~G~~dnTdI~~~i~~Al~i~~~ 203 (236)
+.......||+..+++.+++...
T Consensus 369 lg~~~slaDIapTIl~~~Gv~~p 391 (406)
T PRK12383 369 LGVRTTLSDVGATVCEFFGAPPP 391 (406)
T ss_pred CCCCcEEhhHHHHHHHHcCCCCC
Confidence 22345689999999999999743
No 10
>PRK05362 phosphopentomutase; Provisional
Probab=99.43 E-value=2.2e-12 Score=121.66 Aligned_cols=123 Identities=15% Similarity=0.105 Sum_probs=101.3
Q ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEeecccccc-ccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcce
Q psy2773 23 QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDT-AHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMM 101 (236)
Q Consensus 23 ~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~-agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~glt 101 (236)
..++.+.+.++++.|++.++.+|+++.-..+|+ +||+++++...+.++.+|+.|+.+++.++ ++|+||+|||||+-.
T Consensus 258 ~~~~~~~~~~ale~L~~~~~~~fvfvn~~~~D~~~GH~~~~~~y~~ale~~D~~lg~ll~~L~-~~tlliiTaDHG~d~- 335 (394)
T PRK05362 258 TKSNMDGMDATIEEMKEAGDNGLVFTNLVDFDSLYGHRRDVAGYAAALEEFDARLPELLAALK-EDDLLIITADHGNDP- 335 (394)
T ss_pred CCCHHHHHHHHHHHHHhCCCCcEEEEecccCccccCCcCCHHHHHHHHHHHHHHHHHHHHHhc-cCCEEEEeCCCCCCC-
Confidence 457899999999999843445578888889999 59999999999999999999999998775 479999999999710
Q ss_pred eecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCC--
Q psy2773 102 ISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSH-- 179 (236)
Q Consensus 102 l~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~-- 179 (236)
.|....||+++||++++||+..
T Consensus 336 --------------------------------------------------------t~~gt~HT~e~VPlIi~gp~v~~~ 359 (394)
T PRK05362 336 --------------------------------------------------------TWPGTDHTREYVPLLVYGPKFKGG 359 (394)
T ss_pred --------------------------------------------------------CCCCCCCCCCceeEEEEECCCCcc
Confidence 1334678999999999999854
Q ss_pred CCCCccccchHHHHHHHhcCCCCC
Q psy2773 180 LFTGSYEQNFIPIAMGFASRVGPN 203 (236)
Q Consensus 180 ~f~G~~dnTdI~~~i~~Al~i~~~ 203 (236)
.+.......||+..+++.+++...
T Consensus 360 ~l~~~~sl~DI~pTia~l~Gv~~P 383 (394)
T PRK05362 360 SLGHRETFADIGATIADNFGVEPM 383 (394)
T ss_pred EECCCCEehhHHHHHHHHcCcCCC
Confidence 233455689999999999999843
No 11
>TIGR01696 deoB phosphopentomutase. This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.
Probab=99.42 E-value=3.4e-12 Score=119.72 Aligned_cols=134 Identities=12% Similarity=0.108 Sum_probs=103.7
Q ss_pred eecCCCCCcccCCCCCCCCHHHHHHHHHHHHHhcCCeEEEEeecccccc-ccccCChHHHHHHHHHHHHHHHHHHHhcCC
Q psy2773 7 LFASDHLHYNLGAPASQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDT-AHHNNTPRYALDETVELAKAVSVAVNLTSE 85 (236)
Q Consensus 7 LFa~~~l~y~~dr~~~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~-agH~~d~~~~~~e~~~~D~av~~~l~~~~~ 85 (236)
+|+.+.+ .|....-++.+...++++.|++...+| +++--...|+ +||++|+....+.++.+|+.|+.+++.++
T Consensus 239 iF~g~Gl----t~a~~~~~~~~~~~~~l~aL~~~~~~l-if~nl~d~D~~~GH~~d~~~y~~ale~vD~~Lg~ll~~L~- 312 (381)
T TIGR01696 239 IYDGEGI----TKKVRTTSNMDGMDATIKEMKEDFTGI-SFTNLVDFDALWGHRRDVAGYAAALELFDRRLPELFSLLR- 312 (381)
T ss_pred EecCCCc----ccccCCCCHHHHHHHHHHHHhcCCCCE-EEEEeCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 4555555 332234578999999999998754454 5555558997 79999999999999999999999998775
Q ss_pred CCeEEEEeccCCCcceeecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCcc
Q psy2773 86 KDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHG 165 (236)
Q Consensus 86 ~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HT 165 (236)
++|+||+|||||+- . .+..+.||
T Consensus 313 ~~tllIITADHG~D---------------------p------------------------------------~~~~t~HT 335 (381)
T TIGR01696 313 EDDLLIITADHGND---------------------P------------------------------------TWTGTDHT 335 (381)
T ss_pred cCCEEEEECCCCCC---------------------C------------------------------------CCCCCcCC
Confidence 57899999999971 0 13345699
Q ss_pred CccceeeEEcCCCC---CCCCccccchHHHHHHHhcCCCCC
Q psy2773 166 GDDVMVYARGPWSH---LFTGSYEQNFIPIAMGFASRVGPN 203 (236)
Q Consensus 166 g~dVpv~A~Gp~a~---~f~G~~dnTdI~~~i~~Al~i~~~ 203 (236)
.++||+.++||+.. .+.......||+..|++.+++...
T Consensus 336 re~VPlIi~gp~i~~g~~l~~~~slaDIapTIldllGv~~p 376 (381)
T TIGR01696 336 REYIPVLVYSPKVKPGHSLGHRETFADIGATIADNFGTSDP 376 (381)
T ss_pred CCCEeEEEEECCCCCCceeCCCCEehhHHHHHHHHcCcCCC
Confidence 99999999999853 233455689999999999999743
No 12
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.9e-12 Score=119.94 Aligned_cols=123 Identities=16% Similarity=0.140 Sum_probs=100.0
Q ss_pred CCCHHHHHHHHHHHHHh-cCCeEEEEeeccccc-cccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcc
Q psy2773 23 QPTLAEMTRTAIRLLEK-EQKGYFLFVEGGHID-TAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTM 100 (236)
Q Consensus 23 ~PsL~emt~~al~~L~~-~~kGffl~vEgg~iD-~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gl 100 (236)
.-+..+...+.|+.+++ ..+|| ++..--..| .+||++|+.+..+.+++||+.+..+++-++ +|+|+|+||||||.+
T Consensus 261 ~~~n~~~~d~tl~~~~~~~~~~~-vFtNlVdfD~~yGHRrDv~gYa~aLe~FD~rL~e~~~~l~-edDlLiiTADHGnDP 338 (397)
T COG1015 261 AVSNMDGMDVTLEEMKTAEFNGL-VFTNLVDFDSLYGHRRDVAGYAAALEEFDRRLPELIENLR-EDDLLIITADHGNDP 338 (397)
T ss_pred CCCcHHHHHHHHHHHhcCCCCcE-EEEeeeecccccccccchHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEecCCCCCC
Confidence 46788999999999985 45555 333333589 899999999999999999999999999665 568899999999822
Q ss_pred eeecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCC-
Q psy2773 101 MISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSH- 179 (236)
Q Consensus 101 tl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~- 179 (236)
-|....||++.|||.+|||+-.
T Consensus 339 ---------------------------------------------------------T~~gTdHTRE~iPvl~y~~~~k~ 361 (397)
T COG1015 339 ---------------------------------------------------------TWGGTDHTREYIPVLVYGPGLKP 361 (397)
T ss_pred ---------------------------------------------------------CCCCCCccccccceEEEcCCccC
Confidence 2788899999999999999844
Q ss_pred CCCCcc-ccchHHHHHHHhcCCCCCc
Q psy2773 180 LFTGSY-EQNFIPIAMGFASRVGPNS 204 (236)
Q Consensus 180 ~f~G~~-dnTdI~~~i~~Al~i~~~~ 204 (236)
..-|.. .-.||...|++.+++.+.+
T Consensus 362 ~~lg~r~tfADiGaTvA~~fgv~~~~ 387 (397)
T COG1015 362 GSLGTRETFADIGATVADNFGVSPPQ 387 (397)
T ss_pred CcccccccHHHHHHHHHHHhCCCCcc
Confidence 334444 4589999999999998765
No 13
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=99.41 E-value=3.3e-12 Score=124.38 Aligned_cols=143 Identities=17% Similarity=0.112 Sum_probs=105.2
Q ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCccee
Q psy2773 23 QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMI 102 (236)
Q Consensus 23 ~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gltl 102 (236)
+-|..|.|.++++.|.+.... |++++-..+|.+||.+|++.+++.++++|++|+.+++-+++.+..+||||||||-
T Consensus 402 eMSA~eVtd~~i~~i~~~~yd-fi~vNfan~DmvGHtG~~ea~ikAIE~vD~~Lg~Il~al~~~g~~liITADHGNa--- 477 (558)
T PLN02538 402 KMKALEIAEKARDALLSGKFD-QVRVNLANGDMVGHTGDLEATIVACEAVDAAVKEILDAVEQVGGIYLVTADHGNA--- 477 (558)
T ss_pred CCCHHHHHHHHHHHHhcCCCC-EEEEeccCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEeCCCCCc---
Confidence 568899999999999874333 4777788999999999999999999999999999999776556789999999981
Q ss_pred ecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCCC--
Q psy2773 103 SGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSHL-- 180 (236)
Q Consensus 103 ~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~-- 180 (236)
+.+.. .+.+|.|.. .+.+.++....||.++||+..+||+...
T Consensus 478 -------E~M~d----~~~~G~p~~-------------------------~~~Gtp~~~t~HT~npVP~Ii~g~~~~~~~ 521 (558)
T PLN02538 478 -------EDMVK----RDKSGKPLL-------------------------DKDGNPQILTSHTLAPVPVAIGGPGLPPGV 521 (558)
T ss_pred -------hhhcc----ccccCCccc-------------------------cccCCCCCCCCCCCCCcCEEEEeCCcccCc
Confidence 00000 001111100 0112256789999999999999997542
Q ss_pred -CCC-c--cccchHHHHHHHhcCCCCCcc
Q psy2773 181 -FTG-S--YEQNFIPIAMGFASRVGPNSK 205 (236)
Q Consensus 181 -f~G-~--~dnTdI~~~i~~Al~i~~~~~ 205 (236)
++. . ....||+..|++.|++....+
T Consensus 522 ~l~~~l~~~gLaDVApTIL~lLGl~~P~e 550 (558)
T PLN02538 522 RFRDDLPTAGLANVAATVMNLHGFEAPAD 550 (558)
T ss_pred ccccCccCCcHHhHHHHHHHHhCCCCchh
Confidence 321 1 127999999999999976553
No 14
>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional
Probab=99.39 E-value=1.8e-12 Score=122.14 Aligned_cols=90 Identities=19% Similarity=0.226 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcceeec
Q psy2773 25 TLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISG 104 (236)
Q Consensus 25 sL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gltl~g 104 (236)
++...++++++.|++ ++.+|+++| .+|.+||.+|++.+++.++++|+++..+++ + ++++||||+||+|
T Consensus 265 ~~~~k~~~a~~~l~~-~DfV~vhvk--~~DeaGH~gd~~~Kv~~IE~iD~~l~~ll~-l--~~~~ivVT~DH~T------ 332 (395)
T PRK04135 265 TLEDEIKTLKENWND-YDFFFLHVK--KTDSYGEDGNFEEKVKVIEEVDALLPEILA-L--KPDVLVITGDHST------ 332 (395)
T ss_pred CHHHHHHHHHHHHhc-CCEEEEEec--cCchhhccCCHHHHHHHHHHHHHHHHHHhc-C--CCcEEEEeCCCCC------
Confidence 889999999999975 557777777 599999999999999999999999987774 3 3569999999998
Q ss_pred ccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCC
Q psy2773 105 YSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSH 179 (236)
Q Consensus 105 y~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~ 179 (236)
+.+..+||++|||+..+|++..
T Consensus 333 -----------------------------------------------------P~~~~~Hs~dPVP~li~g~~~~ 354 (395)
T PRK04135 333 -----------------------------------------------------PAVLKGHSWHPVPLLLYSKYCR 354 (395)
T ss_pred -----------------------------------------------------cccccccCCCCEeEEEEcCCCC
Confidence 3456899999999999999865
No 15
>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional
Probab=99.38 E-value=2.3e-12 Score=122.29 Aligned_cols=72 Identities=18% Similarity=0.242 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCC
Q psy2773 24 PTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAH 98 (236)
Q Consensus 24 PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~ 98 (236)
-++.+.++++++.|++ ++.+|++++ .+|.+||++|++.+++.++++|+++..+++.++.++++|||||||||
T Consensus 278 t~~~~k~~~~~~~l~~-~Dfv~vh~~--~~D~~GH~gd~~~k~~aiE~iD~~l~~il~~l~~~~~~liITaDHgt 349 (412)
T PRK04024 278 TNYMAKAKAAVELLKE-YDFVLLNIK--GTDEAGHDGDFEGKVEVIEKIDKMLGYILDNLDLDEVYIAVTGDHST 349 (412)
T ss_pred CCHHHHHHHHHHHhcc-CCEEEEecc--CcchhhcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEecCCCC
Confidence 3889999999999985 556666666 69999999999999999999999999999877646789999999997
No 16
>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form. This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).
Probab=99.31 E-value=1.2e-11 Score=116.80 Aligned_cols=73 Identities=18% Similarity=0.230 Sum_probs=61.9
Q ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCC
Q psy2773 23 QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAH 98 (236)
Q Consensus 23 ~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~ 98 (236)
+-.+...++++++.|++ ++.+|++++ .+|.+||.+|++.+++.++++|+.+...++.++.++.+|||||||||
T Consensus 271 dt~~~~k~~~~~~~l~~-yDfv~v~~~--~~D~aGH~gd~~~k~~aIE~iD~~l~~~l~~l~~~~~~liiTaDHgt 343 (396)
T TIGR00306 271 DTDYRGKVRALILALEE-YDFVLVHTK--GPDEAGHDGDPELKVRAIEKIDSKIVGPLLALDLDETRLILTADHST 343 (396)
T ss_pred cccHHHHHHHHHHHhhc-CCEEEEEec--CCChhhhcCCHHHHHHHHHHHHHHHHHHHHHhhhCCCEEEEeCCCCC
Confidence 34688899999999975 445556665 79999999999999999999999999778767666779999999998
No 17
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=99.25 E-value=1.2e-10 Score=112.62 Aligned_cols=131 Identities=15% Similarity=0.088 Sum_probs=102.0
Q ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCccee
Q psy2773 23 QPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMI 102 (236)
Q Consensus 23 ~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gltl 102 (236)
+-+-.+.+.++++.|++ .+-+|+++....+|++||.++.+.+++.++.+|+.|+.+++.+++.+.+||+|||||+.-.+
T Consensus 363 eMsa~evtd~~i~~I~~-~k~dfi~vnfan~DmvGHtg~~~a~v~AIE~vD~~LGrIl~aLke~G~~VIiTADHGnae~m 441 (501)
T TIGR01307 363 EMSAKAVTDAVLEAIAQ-GKFDLIVVNFANPDMVGHTGNFEAAIKAVEALDVCLGRIVEACKKVGGTLFLTADHGNAEEM 441 (501)
T ss_pred ccCHHHHHHHHHHHHhc-cCCCEEEEECCCcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCChhhc
Confidence 45778999999999976 34568899999999999999999999999999999999999887656689999999981000
Q ss_pred ecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCC-CC
Q psy2773 103 SGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSH-LF 181 (236)
Q Consensus 103 ~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~-~f 181 (236)
. +.+ +.....||+.+||++.++|+.- .+
T Consensus 442 ~----------------d~~-----------------------------------g~p~t~HT~~~VP~Ii~~p~~i~~~ 470 (501)
T TIGR01307 442 I----------------DEN-----------------------------------GNPHTAHTTNPVPFVCVGAKNVKLI 470 (501)
T ss_pred c----------------CCC-----------------------------------CCcccCCCCeEeeEEEEECCccccc
Confidence 0 000 1123369999999999999532 23
Q ss_pred CCccccchHHHHHHHhcCCCCCcc
Q psy2773 182 TGSYEQNFIPIAMGFASRVGPNSK 205 (236)
Q Consensus 182 ~G~~dnTdI~~~i~~Al~i~~~~~ 205 (236)
.......||+..|.+.+|+....+
T Consensus 471 ~~~~sL~DIaPTiLdL~Gi~~P~e 494 (501)
T TIGR01307 471 REGGVLADIAPTILDLMGLEQPAE 494 (501)
T ss_pred CCCceEhHHHHHHHHHhCcCCCCC
Confidence 333468999999999999986543
No 18
>TIGR02535 hyp_Hser_kinase proposed homoserine kinase. The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.
Probab=99.21 E-value=6.8e-11 Score=111.76 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=59.9
Q ss_pred CCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHH-HHHHHhcCC--CCeEEEEeccCCC
Q psy2773 24 PTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAV-SVAVNLTSE--KDTLIVVTADHAH 98 (236)
Q Consensus 24 PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av-~~~l~~~~~--~dTLivvTaDH~~ 98 (236)
-.+...++++++.|++. +++|++++ .+|.+||.+|++.+++.++++|+.+ +.+++.++. +++.|||||||+|
T Consensus 269 t~~~~k~~~~~~~l~~~-Dfv~vh~~--~~D~aGH~gd~~~kv~aIE~lD~~~~~~ll~al~~~~~~~~~~vt~DH~t 343 (396)
T TIGR02535 269 TNYEGKVRAALEALETY-DFVVVHVE--APDEAGHEGDLEAKIKAIELIDSRIVGPLLEALSDRDEPFRILVLPDHPT 343 (396)
T ss_pred cchHHHHHHHHHHHhhC-CEEEEEeC--CCChhhccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeCcc
Confidence 46888899999999864 46777777 6999999999999999999999974 468876643 3668999999997
No 19
>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional
Probab=99.19 E-value=9.3e-11 Score=110.82 Aligned_cols=94 Identities=21% Similarity=0.257 Sum_probs=78.1
Q ss_pred CCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHH-HHHHHhcCC-CCeEEEEeccCCCcce
Q psy2773 24 PTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAV-SVAVNLTSE-KDTLIVVTADHAHTMM 101 (236)
Q Consensus 24 PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av-~~~l~~~~~-~dTLivvTaDH~~glt 101 (236)
-.+...++++++.|++ ++.+|++++ .+|.+||.+|++.+++.++++|+.+ +.+++.++. ++..||||+||+|
T Consensus 268 t~~~~k~~~a~~~l~~-~DfV~vh~~--~~D~aGH~gd~~~kv~aiE~lD~~~~~~ll~al~~~~~~~l~it~DH~t--- 341 (395)
T PRK04200 268 TNYEGKAEAALEALKT-HDFVFVHVE--APDEAGHEGDLEAKIKAIEDIDERVVGPILEALKKYEDYRILVLPDHPT--- 341 (395)
T ss_pred cchHHHHHHHHHHhcc-CCEEEEEec--CcchhhccCCHHHHHHHHHHHHHHhHHHHHHHHHhcCCCEEEEeccCCc---
Confidence 4688999999999976 456666666 6999999999999999999999984 468876642 4678999999997
Q ss_pred eecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCC
Q psy2773 102 ISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSH 179 (236)
Q Consensus 102 l~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~ 179 (236)
+....+||+++||+..+|++..
T Consensus 342 --------------------------------------------------------p~~~~~Ht~~pVP~ii~g~~~~ 363 (395)
T PRK04200 342 --------------------------------------------------------PIELKTHTADPVPFLIYGEGIE 363 (395)
T ss_pred --------------------------------------------------------CCCCCccCCCCEeEEEEcCCcC
Confidence 3456789999999999998744
No 20
>PRK05434 phosphoglyceromutase; Provisional
Probab=99.16 E-value=3.4e-10 Score=109.97 Aligned_cols=128 Identities=13% Similarity=0.104 Sum_probs=96.9
Q ss_pred CCHHHHHHHHHHHHHh-cCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCccee
Q psy2773 24 PTLAEMTRTAIRLLEK-EQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMI 102 (236)
Q Consensus 24 PsL~emt~~al~~L~~-~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gltl 102 (236)
-+..+.+.++++.|++ .++ |+++.-..+|.+||.++.+.+++.++.+|+.|+.+++.++..+-+||+|||||+.-.+
T Consensus 370 Ms~~e~~d~~i~~l~~~~~D--fv~vnf~~~D~vGHtg~~~a~~~AIe~vD~~LGrll~aLk~~g~ivIITADHGn~e~m 447 (507)
T PRK05434 370 MSAYEVTDKLVEAIESGKYD--FIILNFANPDMVGHTGNLEAAVKAVEAVDECLGRVVDAVLKVGGTLLITADHGNAEQM 447 (507)
T ss_pred CcHHHHHHHHHHHHhccCCC--EEEEEecCcchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCccccc
Confidence 4678899999999974 445 4555556899999999999999999999999999999886544589999999982110
Q ss_pred ecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCCCCC
Q psy2773 103 SGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSHLFT 182 (236)
Q Consensus 103 ~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~f~ 182 (236)
. +. ..+.....||..+||++.+||+. ..
T Consensus 448 ~----------------d~----------------------------------~tg~~~~~HT~~~VPlII~~p~~--i~ 475 (507)
T PRK05434 448 I----------------DP----------------------------------ETGQPHTAHTTNPVPFILVGGKA--LR 475 (507)
T ss_pred c----------------cC----------------------------------CCCCcccCCCCeeeEEEEEECCc--cc
Confidence 0 00 00123457999999999999972 22
Q ss_pred C-ccccchHHHHHHHhcCCCCCcc
Q psy2773 183 G-SYEQNFIPIAMGFASRVGPNSK 205 (236)
Q Consensus 183 G-~~dnTdI~~~i~~Al~i~~~~~ 205 (236)
. .....||+..|++.+|+....+
T Consensus 476 ~~~~sL~DIaPTIL~LlGi~~P~~ 499 (507)
T PRK05434 476 LEGGKLADIAPTILDLLGLEQPAE 499 (507)
T ss_pred CCCccHHHHHHHHHHHhCcCCCCC
Confidence 1 3467999999999999876543
No 21
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=98.78 E-value=5.2e-08 Score=93.44 Aligned_cols=130 Identities=15% Similarity=0.120 Sum_probs=100.6
Q ss_pred CCCHHHHHHHHHHHHHhc-CCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcce
Q psy2773 23 QPTLAEMTRTAIRLLEKE-QKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMM 101 (236)
Q Consensus 23 ~PsL~emt~~al~~L~~~-~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~glt 101 (236)
+-|-.|.|.+.++.+++. ++ ++++.....|+.||.++.+.+++.++..|+.|+.++++++..+-.+++||||||+=.
T Consensus 370 EMSa~evtd~~~~~i~~g~~D--~iV~N~ANpDMVGHTG~~eatiKAvEavD~~lg~ivd~~~~~gg~~~iTaDHGNaE~ 447 (509)
T COG0696 370 EMSAKEVTDALVEAIEKGKYD--LIVLNYANPDMVGHTGNFEATIKAVEAVDECLGRIVDAVKKNGGTLLITADHGNAEQ 447 (509)
T ss_pred ccchHHHHHHHHHHHhCCCCC--EEEEecCCCccCcccccHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeecCcchhh
Confidence 457788888888888874 45 577788999999999999999999999999999999998866666779999999311
Q ss_pred eecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCCCC
Q psy2773 102 ISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSHLF 181 (236)
Q Consensus 102 l~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~f 181 (236)
+. +.. +-....||..|||+...|...-..
T Consensus 448 m~----------------d~~-----------------------------------g~p~TaHT~npVp~i~~~~~~v~~ 476 (509)
T COG0696 448 MS----------------DPA-----------------------------------GNPHTAHTTNPVPVIYTGKKGVKA 476 (509)
T ss_pred cc----------------CCC-----------------------------------CCceeccccCCccEEEEcCCccee
Confidence 00 010 234567999999999998443333
Q ss_pred CCccccchHHHHHHHhcCCCCCcc
Q psy2773 182 TGSYEQNFIPIAMGFASRVGPNSK 205 (236)
Q Consensus 182 ~G~~dnTdI~~~i~~Al~i~~~~~ 205 (236)
+-..--.+|+..|.+.|++....+
T Consensus 477 ~~~g~LadiAPTiL~llg~~~P~e 500 (509)
T COG0696 477 RKSGKLADIAPTILDLLGLEIPAE 500 (509)
T ss_pred eeccchhhhhHHHHHHcCCCcchh
Confidence 222567899999999999986654
No 22
>KOG4513|consensus
Probab=98.36 E-value=3.1e-06 Score=79.44 Aligned_cols=127 Identities=17% Similarity=0.102 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcceeecc
Q psy2773 26 LAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTMMISGY 105 (236)
Q Consensus 26 L~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gltl~gy 105 (236)
-.|.+.+|++.+.+.. .=+++|.-...|..||.+|.+..+...+.-|+||+.+++-.+...-.+||||||||.
T Consensus 389 a~eva~ka~~~ie~G~-~p~v~vNlappDMVGHTG~~EAtv~AcEatD~aig~Iy~A~~~~~y~lvvTADHGNA------ 461 (531)
T KOG4513|consen 389 ALEVAEKARDAIESGK-FPQVRVNLAPPDMVGHTGDIEATVVACEATDEAIGKIYDAIEQVGYILVVTADHGNA------ 461 (531)
T ss_pred HHHHHHHHHHHHHcCC-CCeEEEcCCCccccCcccchhhhhhHHHHHHHHHHHHHHHHHhcCcEEEEEcCCCCH------
Confidence 4577888888887542 226999999999999999999999999999999999999776555667799999981
Q ss_pred cCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCC---CCCCC
Q psy2773 106 SKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPW---SHLFT 182 (236)
Q Consensus 106 ~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~---a~~f~ 182 (236)
++. .+.| +-.-..||..+||+..-||+ ..+|.
T Consensus 462 ----EkM------v~~d-----------------------------------gGk~tsHT~~~VPl~i~~pg~~~g~~f~ 496 (531)
T KOG4513|consen 462 ----EKM------VKRD-----------------------------------GGKLTSHTLKPVPLAIGGPGLVKGVRFR 496 (531)
T ss_pred ----HHh------ccCC-----------------------------------CCccccccccccceEecCCccccceeec
Confidence 000 0011 11246799999999999997 34577
Q ss_pred Ccccc----chHHHHHHHhcCCCCCc
Q psy2773 183 GSYEQ----NFIPIAMGFASRVGPNS 204 (236)
Q Consensus 183 G~~dn----TdI~~~i~~Al~i~~~~ 204 (236)
+-.|- .+++...+..+|+...+
T Consensus 497 ~~~dt~p~L~dVApTVl~imG~p~Ps 522 (531)
T KOG4513|consen 497 GDVDTDPGLADVAPTVLNIMGFPAPS 522 (531)
T ss_pred cccccCchhhhhhHHHHHHhCCCCcc
Confidence 76665 67888888888876554
No 23
>PF00884 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphatases 3.1.6. from EC are enzymes that hydrolyze various sulphate esters. The sequence of different types of sulphatases are available and have shown to be structurally related [, , ]; these include: arylsulphatase A 3.1.6.8 from EC (ASA), a lysosomal enzyme which hydrolyses cerebroside sulphate; arylsulphatase B 3.1.6.12 from EC (ASB), which hydrolyses the sulphate ester group from N-acetylgalactosamine 4-sulphate residues of dermatan sulphate; arylsulphatase C (ASD) and E (ASE); steryl-sulphatase 3.1.6.2 from EC (STS), a membrane bound microsomal enzyme which hydrolyses 3-beta-hydroxy steroid sulphates; iduronate 2-sulphatase precursor 3.1.6.13 from EC (IDS), a lysosomal enzyme that hydrolyses the 2-sulphate groups from non-reducing-terminal iduronic acid residues in dermatan sulphate and heparan sulphate; N-acetylgalactosamine-6-sulphatase 3.1.6.4 from EC, which hydrolyses the 6-sulphate groups of the N-acetyl-d-galactosamine 6-sulphate units of chondroitin sulphate and the D-galactose 6-sulphate units of keratan sulphate; glucosamine-6-sulphatase 3.1.6.14 from EC (G6S), which hydrolyses the N-acetyl-D-glucosamine 6-sulphate units of heparan sulphate and keratan sulphate; N-sulphoglucosamine sulphohydrolase 3.10.1.1 from EC (sulphamidase), the lysosomal enzyme that catalyses the hydrolysis of N-sulpho-d-glucosamine into glucosamine and sulphate; sea urchin embryo arylsulphatase 3.1.6.1 from EC; green algae arylsulphatase 3.1.6.1 from EC, which plays an important role in the mineralisation of sulphates; and arylsulphatase 3.1.6.1 from EC from Escherichia coli (aslA), Klebsiella aerogenes (gene atsA) and Pseudomonas aeruginosa (gene atsA). ; GO: 0008484 sulfuric ester hydrolase activity, 0008152 metabolic process; PDB: 1P49_A 1FSU_A 2QZU_A 2W5Q_A 2W5T_A 2W5S_A 2W5R_A 3LXQ_A 1HDH_B 1E33_P ....
Probab=98.08 E-value=2.6e-05 Score=68.17 Aligned_cols=130 Identities=15% Similarity=0.108 Sum_probs=81.3
Q ss_pred CCHHHHHHHHHHHH-HhcCCeEEEEeecccccc--------cccc------------CChHHHHHHHHHHHHHHHHHHHh
Q psy2773 24 PTLAEMTRTAIRLL-EKEQKGYFLFVEGGHIDT--------AHHN------------NTPRYALDETVELAKAVSVAVNL 82 (236)
Q Consensus 24 PsL~emt~~al~~L-~~~~kGffl~vEgg~iD~--------agH~------------~d~~~~~~e~~~~D~av~~~l~~ 82 (236)
..-..++..+++.| .+..+.||+++.-...-. .... .........+...|++|+.++++
T Consensus 151 ~~d~~~~~~~~~~l~~~~~~p~f~~~~~~~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~l~~~~~~ 230 (308)
T PF00884_consen 151 YSDDALFDYAIDFLLNEDDKPFFLFIHTMGPHGPYPYPPDYAEKFPKFSPDIPDKDREMRNNYLNAIAYVDDQLGRFIEY 230 (308)
T ss_dssp EHHHHHHHHHHHHHHCTTTSSEEEEEEE-TTSSSTCTTCCHHHGGTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhhhhhcccccceeEEeeccccccccccccccccccccccccccchhhhHHHHHHHHHHHHHHhhhhhhh
Confidence 34577888888887 445788888886422211 0000 12235556788899999999999
Q ss_pred cC----CCCeEEEEeccCCCcceeecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCccccCCCCCCcccccC
Q psy2773 83 TS----EKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYNATSRDASFHYPALVP 158 (236)
Q Consensus 83 ~~----~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~v~ 158 (236)
++ .++|+||+|||||..+.=++.. ..+.+.. ..
T Consensus 231 l~~~~~~d~TiiiitsDHG~~~~e~~~~--------------~~~~~~~-----------------------------~~ 267 (308)
T PF00884_consen 231 LKEQGLYDNTIIIITSDHGESFGENGHY--------------FHGGKGN-----------------------------DL 267 (308)
T ss_dssp HHHTTCGGGEEEEEEESSSSSTGGHHTT--------------SSSSTTH-----------------------------SS
T ss_pred hhhcCCcccceeEEecCcCccccccccc--------------ccccccc-----------------------------cc
Confidence 83 4789999999999732100000 0000000 00
Q ss_pred CCCCCccCccceeeEEcCCCCC---CCCccccchHHHHHHHhcCC
Q psy2773 159 AKDETHGGDDVMVYARGPWSHL---FTGSYEQNFIPIAMGFASRV 200 (236)
Q Consensus 159 ~~s~~HTg~dVpv~A~Gp~a~~---f~G~~dnTdI~~~i~~Al~i 200 (236)
+. ....||++.+.|+... ......+.||+..|++++||
T Consensus 268 ~~----~~~~vP~~i~~p~~~~~~~~~~~~s~~Di~pTll~l~Gi 308 (308)
T PF00884_consen 268 YE----ESYHVPLIIYWPGGEPQQTIDRLVSHIDIAPTLLDLLGI 308 (308)
T ss_dssp SH----HHHBEEEEEECTTSSSCEEECS-EEGGGHHHHHHHHTT-
T ss_pred hh----hccccceEEEcCCCCCCcEECCeEEhHHHHHHHHHHhCC
Confidence 11 1225999999998654 45788899999999999986
No 24
>COG3083 Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only]
Probab=97.52 E-value=0.0022 Score=62.56 Aligned_cols=151 Identities=14% Similarity=0.131 Sum_probs=91.8
Q ss_pred ceEeeecCCCCCcccCCC------------CCCCCHHHHHHHHHHHHH--hcCCeEEEEeeccccccccccCCh------
Q psy2773 3 SFKSLFASDHLHYNLGAP------------ASQPTLAEMTRTAIRLLE--KEQKGYFLFVEGGHIDTAHHNNTP------ 62 (236)
Q Consensus 3 ~lLGLFa~~~l~y~~dr~------------~~~PsL~emt~~al~~L~--~~~kGffl~vEgg~iD~agH~~d~------ 62 (236)
+=+|||+.....+-+=|. ...+.=+..++-.+...+ +.++.||-.++-. ..|+++-
T Consensus 340 YQfglfss~~F~splfrqalf~~l~~~~~~t~~~~~~~~t~~~~wf~~~~~~d~PwFs~L~l~----~~~~~~~~~s~q~ 415 (600)
T COG3083 340 YQFGLFSSDGFKSPLFRQALFSDLSLPALVTQSSDDERATQWLLWFGRYRDEDNPWFSYLSLN----SSHANDDPSSNQA 415 (600)
T ss_pred ceEEeeccCCCCCchHHHHHhhhcCccccccCCchHHHHHHHHHHHHHhhccCCCceEEEEcc----ccccccccccccc
Confidence 568999998877766331 111233344444444443 3566777444420 2255553
Q ss_pred -------HHHHHHHHHHHHHHHHHHHhcC----CCCeEEEEeccCCCcceeecccCCcccccccccccCCCCCCcccccc
Q psy2773 63 -------RYALDETVELAKAVSVAVNLTS----EKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSY 131 (236)
Q Consensus 63 -------~~~~~e~~~~D~av~~~l~~~~----~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~ 131 (236)
.+.-.++-+.|.-|+.+++-++ -++|+||||||||.-+. ++.+ .| +
T Consensus 416 ~~~~~~~~~Y~~a~~~vD~~I~~vLe~L~~~~~L~NTvVIITs~HG~eFn-----e~~~--------------~y----w 472 (600)
T COG3083 416 KARPPFKNRYQNALREVDSQIGRVLEQLRNSGLLDNTVVIITADHGEEFN-----EEEQ--------------NY----W 472 (600)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHhhcccccceEEEEECCCCcccC-----cccc--------------cc----c
Confidence 5666788899999999999874 48999999999996110 0000 00 1
Q ss_pred cCCCCCCCCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCC--CCCCCCccccchHHHHHHH-hcCCCCCcc
Q psy2773 132 ANGPAARAPVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPW--SHLFTGSYEQNFIPIAMGF-ASRVGPNSK 205 (236)
Q Consensus 132 ~~g~~~~~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~--a~~f~G~~dnTdI~~~i~~-Al~i~~~~~ 205 (236)
+.|.+| +.-|. .||++.+=|+ +....+..+..||...++. .+++...+.
T Consensus 473 G~~t~y-----------------------sr~ql--qVPlvihwpg~~~~~v~~lTsH~Dl~~tLMq~ll~V~np~~ 524 (600)
T COG3083 473 GHGTNY-----------------------SRYQL--QVPLVIHWPGTPAGRVNHLTSHLDLMTTLMQRLLGVSNPPS 524 (600)
T ss_pred cCCCcc-----------------------cccee--cccEEEEeCCCcchhhcCccchhhhHHHHHHHHhcCCCChh
Confidence 111111 01122 3666666555 5578899999999988887 888886653
No 25
>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase). These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....
Probab=97.50 E-value=0.00016 Score=65.17 Aligned_cols=73 Identities=25% Similarity=0.331 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHHH-HHh-cCCeEEEEeeccccccccc--cCChHHHHHHHHHHHHHHHHHHHhcCC----CCeEEEEecc
Q psy2773 24 PTLAEMTRTAIRL-LEK-EQKGYFLFVEGGHIDTAHH--NNTPRYALDETVELAKAVSVAVNLTSE----KDTLIVVTAD 95 (236)
Q Consensus 24 PsL~emt~~al~~-L~~-~~kGffl~vEgg~iD~agH--~~d~~~~~~e~~~~D~av~~~l~~~~~----~dTLivvTaD 95 (236)
+.+.+....+++. +++ +.+.+++.+. .+|+.+| ..+-....+.+..+|++|+.+++.+++ ++|+||||||
T Consensus 165 ~~~~~~~~~~~~~l~~~~~pdl~~~~~~--~~D~~~H~~g~~s~~~~~~~~~~D~~ig~l~~~l~~~~~~~~~~iiv~SD 242 (365)
T PF01663_consen 165 PELDEWITDAAEYLIQKERPDLIFVYFP--EPDHIGHRYGPDSPEIEDAYRRIDQAIGRLLEALDENGLLEDTNIIVTSD 242 (365)
T ss_dssp HHHHHHHHHHHHHHHHTTTESEEEEEEE--CCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHTT-TTTEEEEEEES
T ss_pred HHHHHHHHHHHHHHHhhCCCCEEEEEec--CCCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEEEEcc
Confidence 4455555545554 444 3355555554 6999999 234445678999999999999988762 5799999999
Q ss_pred CCC
Q psy2773 96 HAH 98 (236)
Q Consensus 96 H~~ 98 (236)
||.
T Consensus 243 HG~ 245 (365)
T PF01663_consen 243 HGM 245 (365)
T ss_dssp ---
T ss_pred Ccc
Confidence 998
No 26
>PRK13759 arylsulfatase; Provisional
Probab=97.36 E-value=0.00097 Score=64.48 Aligned_cols=89 Identities=9% Similarity=-0.008 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHhcC----CCCeEEEEeccCCCcceeecccCCcccccccccccCCCCCCcccccccCCCCCCCC
Q psy2773 65 ALDETVELAKAVSVAVNLTS----EKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAP 140 (236)
Q Consensus 65 ~~~e~~~~D~av~~~l~~~~----~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~ 140 (236)
....+..+|+.|+.+++.++ .++|+||+|||||..+.=.| ..+ .
T Consensus 270 Y~~~i~~~D~~iG~l~~~l~~~g~~dnTiiv~tsDHG~~~g~~~-------~~~------k------------------- 317 (485)
T PRK13759 270 YYGLITHIDHQIGRFLQALKEFGLLDNTIILFVSDHGDMLGDHY-------LFR------K------------------- 317 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccCeEEEEECCCcccccccc-------ccc------C-------------------
Confidence 45578889999999999886 37899999999996321000 000 0
Q ss_pred CCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCC-------CCCCccccchHHHHHHHhcCCCCCc
Q psy2773 141 VYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSH-------LFTGSYEQNFIPIAMGFASRVGPNS 204 (236)
Q Consensus 141 ~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~-------~f~G~~dnTdI~~~i~~Al~i~~~~ 204 (236)
...|.. +.-||++.++|+.. .........||+..|++.+|+....
T Consensus 318 ---------------~~~~e~----~~rVPlii~~p~~~~~~~~g~~~~~~v~~~Di~pTil~l~g~~~p~ 369 (485)
T PRK13759 318 ---------------GYPYEG----SAHIPFIIYDPGGLLAGNRGTVIDQVVELRDIMPTLLDLAGGTIPD 369 (485)
T ss_pred ---------------Cccccc----cceeeEEEecCCcccccCCCceecCcceecchHHHHHHHhCCCCCc
Confidence 001222 23599999999721 1345667899999999999987543
No 27
>TIGR03417 chol_sulfatase choline-sulfatase.
Probab=97.36 E-value=0.00073 Score=65.58 Aligned_cols=88 Identities=11% Similarity=0.071 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHHhcC----CCCeEEEEeccCCCcceeecccCCcccccccccccCCCCCCcccccccCCCCCCCC
Q psy2773 65 ALDETVELAKAVSVAVNLTS----EKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAP 140 (236)
Q Consensus 65 ~~~e~~~~D~av~~~l~~~~----~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~ 140 (236)
....+..+|+.|+.+++.++ .+||+||+|||||..++ +.|. + . +.
T Consensus 255 Y~~~v~~~D~~iG~il~~L~~~g~~dnTivvf~sDHG~~~G-------------------~~g~-~-----~--K~---- 303 (500)
T TIGR03417 255 YFGAISYLDDKIGELLQTLEETRQADDTIVLFTSDHGDMLG-------------------ERGL-W-----Y--KM---- 303 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCcEEEEECCCchhhc-------------------cCCc-c-----c--cc----
Confidence 45677789999999999886 38999999999997321 0000 0 0 00
Q ss_pred CCccccCCCCCCcccccCCCCCCccCccceeeEEcCCC---CCCCCccccchHHHHHHHhcCCCCC
Q psy2773 141 VYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWS---HLFTGSYEQNFIPIAMGFASRVGPN 203 (236)
Q Consensus 141 ~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a---~~f~G~~dnTdI~~~i~~Al~i~~~ 203 (236)
..+. .+.-||++.++|+. ........+.||+..|++++|+...
T Consensus 304 ----------------~~ye----~~~~vPlii~~p~~~~~~~~~~~v~~~Di~pTil~l~g~~~~ 349 (500)
T TIGR03417 304 ----------------SFFE----GSARVPLMVHAPGRFAPGRVAAPVSTVDLLPTLVDLAGGDMD 349 (500)
T ss_pred ----------------Cccc----ccceEeEEEEeCCCCCCcccCCceeehhHHHHHHHHhCCCCc
Confidence 0111 23459999999972 2345556678999999999998743
No 28
>TIGR02335 hydr_PhnA phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.
Probab=97.09 E-value=0.0016 Score=62.08 Aligned_cols=62 Identities=15% Similarity=0.229 Sum_probs=48.6
Q ss_pred HHHHHHHHHhcCCeEEEEeeccccccccccC--ChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCC
Q psy2773 30 TRTAIRLLEKEQKGYFLFVEGGHIDTAHHNN--TPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAH 98 (236)
Q Consensus 30 t~~al~~L~~~~kGffl~vEgg~iD~agH~~--d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~ 98 (236)
+..+++.|++..-.| +.+ +.+|+.||.. +.....+.+.++|+.|+.+++. +++||||||||.
T Consensus 177 ~~~a~~~l~~~~pdl-lyl--~~~D~~gH~~Gp~S~e~~~~~~~lD~~l~~L~~~----~~~vvvtaDHG~ 240 (408)
T TIGR02335 177 LDAGLSLLTNERPDL-MYL--STSDYVQHKHAPGEPESNAFYAAMDSRFKRYHEQ----GAIVAITADHGM 240 (408)
T ss_pred HHHHHHHHhccCCcE-EEe--cCcCccccccCCCCHHHHHHHHHHHHHHHHHHHC----CCEEEEECCCCC
Confidence 567777787643234 444 4799999966 5677888999999999998872 699999999997
No 29
>PRK11560 phosphoethanolamine transferase; Provisional
Probab=97.08 E-value=0.0055 Score=60.76 Aligned_cols=35 Identities=14% Similarity=0.284 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCc
Q psy2773 65 ALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHT 99 (236)
Q Consensus 65 ~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~g 99 (236)
....+...|..|+.+++.+++++|+||.|||||-.
T Consensus 434 YdnsI~ytD~~lg~ii~~Lk~~nTivIy~SDHGe~ 468 (558)
T PRK11560 434 YDNSVLYVDHFISSVIDQLRDKKAIVFYAADHGES 468 (558)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCeEEEEEcCCCCc
Confidence 45677889999999999988789999999999974
No 30
>PRK03776 phosphoglycerol transferase I; Provisional
Probab=96.97 E-value=0.012 Score=60.18 Aligned_cols=73 Identities=18% Similarity=0.216 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHH---hcCCeEEEEeeccccccc-ccc------------CChHHHHHHHHHHHHHHHHHHHhcC----C
Q psy2773 26 LAEMTRTAIRLLE---KEQKGYFLFVEGGHIDTA-HHN------------NTPRYALDETVELAKAVSVAVNLTS----E 85 (236)
Q Consensus 26 L~emt~~al~~L~---~~~kGffl~vEgg~iD~a-gH~------------~d~~~~~~e~~~~D~av~~~l~~~~----~ 85 (236)
=..+++.|++.+. +.++.||+++---.+=+- ++. +........+...|++|+.++++++ .
T Consensus 305 Dd~Lfd~A~e~l~eLsk~~kPFfl~llTlstH~P~g~~~~~c~~~~y~~~g~~~~~~~~v~~~D~~iG~fi~~Lk~~g~~ 384 (762)
T PRK03776 305 DDTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKSYDFDGKPNQSFSAVSCSQENIAALINKIKASPWF 384 (762)
T ss_pred cHHHHHHHHHHHHHhhcCCCCEEEEecCCCCcCCCccCchhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3567777776554 467789887643211110 110 0112345678889999999999987 3
Q ss_pred CCeEEEEeccCCC
Q psy2773 86 KDTLIVVTADHAH 98 (236)
Q Consensus 86 ~dTLivvTaDH~~ 98 (236)
+||+||+|||||.
T Consensus 385 dNTiIV~~sDHG~ 397 (762)
T PRK03776 385 KNTVIVVSSDHLA 397 (762)
T ss_pred cCeEEEEEccCCc
Confidence 7999999999996
No 31
>COG3119 AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]
Probab=96.95 E-value=0.0046 Score=59.78 Aligned_cols=95 Identities=18% Similarity=0.114 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcC----CCCeEEEEeccCCCcceeecccCCcccccccccccCCCCCCcccccccCCCCCCC
Q psy2773 64 YALDETVELAKAVSVAVNLTS----EKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARA 139 (236)
Q Consensus 64 ~~~~e~~~~D~av~~~l~~~~----~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~ 139 (236)
.....+..+|..|+.+++.++ .+||+||+|||||--+... +.++. .++.
T Consensus 261 ~Y~a~v~~~D~~iGrll~~L~~~g~~DnTivvftsDhG~~~~~~-------------------~~~~~-----~~k~--- 313 (475)
T COG3119 261 VYAACVRYLDDQIGRLLDALKELGLLDNTIVVFTSDHGAWLGAH-------------------GTPFR-----GYKG--- 313 (475)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhCCccCcEEEEeCCCCCcccCC-------------------CCccc-----cccc---
Confidence 344457799999999999886 3789999999999310000 00000 0000
Q ss_pred CCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCCCCCC-----ccccchHHHHHHHhcCCCCCccc
Q psy2773 140 PVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSHLFTG-----SYEQNFIPIAMGFASRVGPNSKL 206 (236)
Q Consensus 140 ~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~f~G-----~~dnTdI~~~i~~Al~i~~~~~~ 206 (236)
.-|.. +.-||++...|+.-...| ....-||+..+.+++|+.....+
T Consensus 314 -----------------~~~eg----g~~VPliI~~Pg~i~~~g~~~~~~v~~~Di~PTll~~aG~~~~~~~ 364 (475)
T COG3119 314 -----------------TLYEG----GTRVPLIIRWPGGIKPGGRVVDALVSLIDLLPTLLDAAGVPPPKDL 364 (475)
T ss_pred -----------------ccccC----cccceEEEeccCccCCCCccccccchhhHHHHHHHHHcCCCCcccc
Confidence 01222 345999999888644433 33338999999999998877633
No 32
>KOG2125|consensus
Probab=96.71 E-value=0.0047 Score=62.09 Aligned_cols=48 Identities=17% Similarity=0.216 Sum_probs=38.0
Q ss_pred cccccccc--cCChHHHHHHHHHHHHHHHHHHHhcC----CCCeEEEEeccCCC
Q psy2773 51 GHIDTAHH--NNTPRYALDETVELAKAVSVAVNLTS----EKDTLIVVTADHAH 98 (236)
Q Consensus 51 g~iD~agH--~~d~~~~~~e~~~~D~av~~~l~~~~----~~dTLivvTaDH~~ 98 (236)
...||.|| .+.-...-..+.|+|+-++.+.+++. .++||+++++|||-
T Consensus 200 LGlDHIGH~~G~~Sp~vp~KLkEmDeiv~~I~~~~~~~~s~d~tllil~gDHGM 253 (760)
T KOG2125|consen 200 LGLDHIGHVLGPSSPLVPAKLKEMDEIVKRIHDYLMEHRSGDQTLLILCGDHGM 253 (760)
T ss_pred hccceeccccCCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEccccc
Confidence 35899999 34445556678899999999988764 36899999999994
No 33
>KOG2126|consensus
Probab=96.64 E-value=0.0026 Score=65.23 Aligned_cols=46 Identities=24% Similarity=0.410 Sum_probs=39.9
Q ss_pred ccccccccC--ChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCC
Q psy2773 52 HIDTAHHNN--TPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHAH 98 (236)
Q Consensus 52 ~iD~agH~~--d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~ 98 (236)
.+||+||.. |-..+.+.+.++|+.++.+++-.+ +|||+||.+|||-
T Consensus 216 GVDH~GHk~GPdH~~M~~KL~qmD~vI~~ii~~md-edTlLvVmGDHGM 263 (895)
T KOG2126|consen 216 GVDHCGHKHGPDHPEMADKLVQMDRVINEIIKKMD-EDTLLVVMGDHGM 263 (895)
T ss_pred CcccccccCCCCCHHHHHHHHHHHHHHHHHHHHhc-cCeeEEEecCCCC
Confidence 589999965 557788899999999999999665 7899999999985
No 34
>KOG3731|consensus
Probab=95.95 E-value=0.018 Score=55.57 Aligned_cols=91 Identities=19% Similarity=0.108 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCeEEEEeccCCCcceeecccCCcccccccccccCCCCCCcccccccCCCCCC
Q psy2773 63 RYALDETVELAKAVSVAVNLTS----EKDTLIVVTADHAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAAR 138 (236)
Q Consensus 63 ~~~~~e~~~~D~av~~~l~~~~----~~dTLivvTaDH~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~ 138 (236)
.+..+.+..+|..|+.+.+... .++|.||-|||||--++ -+ .....-..||.
T Consensus 273 rkrlQtlqSvd~sve~l~n~l~elgeLdnTyivytsDhGyhlG--qf-----------gl~kgks~pyE----------- 328 (541)
T KOG3731|consen 273 RKRLQTLQSVDDSVERLYNLLGELGELDNTYIVYTSDHGYHLG--QF-----------GLWKGKSMPYE----------- 328 (541)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhcccceEEEEEcCCccccc--cc-----------ccccCCCCcee-----------
Confidence 5677888899999998887653 48999999999995221 01 00000001111
Q ss_pred CCCCccccCCCCCCcccccCCCCCCccCccceeeEEcCCCC---CCCCccccchHHHHHHHhcCCCCC
Q psy2773 139 APVYNATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSH---LFTGSYEQNFIPIAMGFASRVGPN 203 (236)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~---~f~G~~dnTdI~~~i~~Al~i~~~ 203 (236)
. ..-||++..||+-+ .+.+...|-|++..|.+.+|+...
T Consensus 329 f--------------------------diRVPf~iRgP~v~~~~~~~~Iv~niDlaPTilDiAGlp~p 370 (541)
T KOG3731|consen 329 F--------------------------DIRVPFLIRGPGVAPNKTVNEIVLNIDLAPTILDIAGLPKP 370 (541)
T ss_pred E--------------------------eeeeeEEeeCCCCCccccchhhheeccccchhhhhcCCCCc
Confidence 0 11499999999865 478999999999999999999866
No 35
>PF08665 PglZ: PglZ domain; InterPro: IPR013973 This entry is a member of the Alkaline phosphatase clan.
Probab=95.81 E-value=0.021 Score=48.13 Aligned_cols=53 Identities=19% Similarity=0.242 Sum_probs=30.8
Q ss_pred cCCeEEEEeecccccccccc--CC--h-HHHHHHHH------HHHHHHHHHHHhcCCCCeEEEEeccCCC
Q psy2773 40 EQKGYFLFVEGGHIDTAHHN--NT--P-RYALDETV------ELAKAVSVAVNLTSEKDTLIVVTADHAH 98 (236)
Q Consensus 40 ~~kGffl~vEgg~iD~agH~--~d--~-~~~~~e~~------~~D~av~~~l~~~~~~dTLivvTaDH~~ 98 (236)
+.+-.++.+ ..||..||. .. . +.+-+.+. .+.+.|+.+.+. ..-|++|||||+
T Consensus 111 ~~~vv~vv~--n~ID~~~~~~~~~~~~~~~~~~~i~~~~~~~~L~~li~~l~~~----~~~V~ITsDHG~ 174 (181)
T PF08665_consen 111 GTRVVYVVH--NFIDDLGHKRKSEQLGFEAMYRAIELWWFEHELRSLIKELRNA----GRRVVITSDHGF 174 (181)
T ss_pred CCCEEEEEE--cchhhhhCcccccchhHHHHHHHHhhhhhhHHHHHHHHHHHhc----CceEEEECCCCC
Confidence 344444444 589999992 21 1 22223333 444555555442 456999999998
No 36
>PRK09598 lipid A phosphoethanolamine transferase; Reviewed
Probab=95.71 E-value=0.095 Score=51.67 Aligned_cols=35 Identities=9% Similarity=0.150 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHhcC--CCCeEEEEeccCCCc
Q psy2773 65 ALDETVELAKAVSVAVNLTS--EKDTLIVVTADHAHT 99 (236)
Q Consensus 65 ~~~e~~~~D~av~~~l~~~~--~~dTLivvTaDH~~g 99 (236)
....+...|..|+.+++.++ ..+|+||.+||||-.
T Consensus 406 YdnsI~ytD~~l~~ii~~Lk~~~~~t~iIy~SDHGe~ 442 (522)
T PRK09598 406 YDNTIFYNDYLLDKIISMLKNLKQPALMIYLSDHGES 442 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEccCccc
Confidence 34467778999999998886 348999999999963
No 37
>TIGR02687 conserved hypothetical protein TIGR02687. Members of this family are uncharacterized proteins sporadically distributed in bacteria and archaea, about 880 amino acids in length. This protein is repeatedly found upstream of another uncharacterized protein of about 470 amino acids in length, modeled by TIGR02688.
Probab=95.02 E-value=0.07 Score=55.48 Aligned_cols=68 Identities=26% Similarity=0.365 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHH-----HHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCC
Q psy2773 27 AEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRY-----ALDETVELAKAVSVAVNLTSEKDTLIVVTADHAH 98 (236)
Q Consensus 27 ~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~-----~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~ 98 (236)
.+|..+-.+.+-++.+ ++.|=...||..||....+. .-+.+.+++++|+.+++-+. .+.|+||||||.
T Consensus 556 ~~~~~~e~r~~~~~~~--~vyiY~~~ID~~g~~~~~e~~~f~a~~~~l~el~~~v~~l~~~l~--~~~i~iTADHGf 628 (844)
T TIGR02687 556 MRYKRDEGRELIRDKR--VIYIYHNKIDATGDKQSSEENVFEAVEETIVELKKLVKYLINRLN--GTNIIVTADHGF 628 (844)
T ss_pred hhhhHHHHHHhhcCCc--EEEEecCccchhhcccCCcchHHHHHHHHHHHHHHHHHHHHHhcC--CcEEEEECCCcc
Confidence 3444444444433343 45665678999999765553 33566778888888776433 469999999997
No 38
>KOG2645|consensus
Probab=94.94 E-value=0.077 Score=51.00 Aligned_cols=72 Identities=22% Similarity=0.282 Sum_probs=50.5
Q ss_pred CHHHHHHHHHH-HH-Hh-cCCeEEEEeeccccccccccCChHH--HHHHHHHHHHHHHHHHHhcC----CCCeEEEEecc
Q psy2773 25 TLAEMTRTAIR-LL-EK-EQKGYFLFVEGGHIDTAHHNNTPRY--ALDETVELAKAVSVAVNLTS----EKDTLIVVTAD 95 (236)
Q Consensus 25 sL~emt~~al~-~L-~~-~~kGffl~vEgg~iD~agH~~d~~~--~~~e~~~~D~av~~~l~~~~----~~dTLivvTaD 95 (236)
++.+.....++ .| ++ ..+-+.+-+| .+|..||..-+.. ..+.+.++|.+++.+++.++ .++.=||++||
T Consensus 156 ~~~~~~~~i~~~~~~~~e~p~l~~~Y~~--~pD~~gh~~Gp~~~~v~~~l~~vD~~i~~L~~~Lk~r~L~~~vNvIi~SD 233 (418)
T KOG2645|consen 156 PLEERADTVLDLDLPEKERPDLLLLYVE--EPDHSGHRYGPDSPEVEKALKEVDDFIGYLIKGLKDRNLFEDVNVIIVSD 233 (418)
T ss_pred cHHHHHHHHhccccccccCCCceEEecc--CCCccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHccccccceEEEeec
Confidence 45555555555 11 12 3333334455 7999999776654 78899999999999998776 24566999999
Q ss_pred CCC
Q psy2773 96 HAH 98 (236)
Q Consensus 96 H~~ 98 (236)
||-
T Consensus 234 HGM 236 (418)
T KOG2645|consen 234 HGM 236 (418)
T ss_pred CCc
Confidence 997
No 39
>PRK11598 putative metal dependent hydrolase; Provisional
Probab=94.91 E-value=0.35 Score=47.99 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCC----CCeEEEEeccCCCc
Q psy2773 65 ALDETVELAKAVSVAVNLTSE----KDTLIVVTADHAHT 99 (236)
Q Consensus 65 ~~~e~~~~D~av~~~l~~~~~----~dTLivvTaDH~~g 99 (236)
....+...|..|+.+++.++. ++|+||.+||||-.
T Consensus 420 YdnsI~ytD~~lg~ii~~Lk~~~~~~nT~iIy~SDHGe~ 458 (545)
T PRK11598 420 YDNTILYVDYIVDKAINLLKQHQDKFNTSLVYLSDHGES 458 (545)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcCCeEEEEECcCCCc
Confidence 456778899999999998862 57999999999973
No 40
>PRK12363 phosphoglycerol transferase I; Provisional
Probab=94.20 E-value=0.19 Score=51.33 Aligned_cols=72 Identities=17% Similarity=0.158 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHh---cCCeEEEEeeccc-------ccccc-c---cC--ChHHHHHHHHHHHHHHHHHHHhcC----CC
Q psy2773 27 AEMTRTAIRLLEK---EQKGYFLFVEGGH-------IDTAH-H---NN--TPRYALDETVELAKAVSVAVNLTS----EK 86 (236)
Q Consensus 27 ~emt~~al~~L~~---~~kGffl~vEgg~-------iD~ag-H---~~--d~~~~~~e~~~~D~av~~~l~~~~----~~ 86 (236)
..+.+.|++.|++ .++.||+.+---. ++... . .. ........+...|++|+.++++++ .+
T Consensus 303 d~lfd~A~~~Le~Ls~~~qPFfl~llTvsnH~Py~~lp~~~~~~~~~~~~gd~~Yl~tI~ysD~aIG~FId~LKksglyd 382 (703)
T PRK12363 303 DVLLDDAYDEFETLSRAGQPFMLTTLTMDTHHPAGHLPSACKGQRYDSPLGDIGMLHAIKCSDRLIGQLVDRIRNSRYGK 382 (703)
T ss_pred HHHHHHHHHHHHhhhccCCCEEEEeeCCCCCCCcccCchhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 5566777766554 5678988764211 11100 0 00 013455677789999999999987 27
Q ss_pred CeEEEEeccCCC
Q psy2773 87 DTLIVVTADHAH 98 (236)
Q Consensus 87 dTLivvTaDH~~ 98 (236)
+|+||+++||+.
T Consensus 383 NTIIV~~GDH~~ 394 (703)
T PRK12363 383 NTIIVIASDHLA 394 (703)
T ss_pred CeEEEEEcCCCc
Confidence 999999999984
No 41
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type. A member of this family, AcpA from Burkholderia mallei, has been charactized as a surface-bound glycoprotein with acid phosphatase activity, as can be shown with the colorigenic substrate 5-bromo-4-chloro-3-indolyl phosphate. This family shares regions of sequence similarity with phosphocholine-preferring phospholipase C enzymes (TIGR03396) from many of the same species.
Probab=94.03 E-value=0.19 Score=49.23 Aligned_cols=82 Identities=12% Similarity=0.089 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHhcC----CCCeEEEEecc-CCCcceeecccCCcccccccccccCCCCCCcccccccCCCCCCCCCCc
Q psy2773 69 TVELAKAVSVAVNLTS----EKDTLIVVTAD-HAHTMMISGYSKRNNDILGAADQKDLNGNPYPTLSYANGPAARAPVYN 143 (236)
Q Consensus 69 ~~~~D~av~~~l~~~~----~~dTLivvTaD-H~~gltl~gy~~~~~~~~~~~~~~~~d~~~~~~l~~~~g~~~~~~~~~ 143 (236)
+...|+.|+.+++.++ .++|+||+|+| ||. |.. +.+. |
T Consensus 365 v~~gD~~vg~vl~aL~~~p~w~NTlII~T~DENGG------~~D---------------hv~p--------P-------- 407 (483)
T TIGR03397 365 VAAGDRHIADVIAHLQKSPQWKNMVVIVTYDENGG------FWD---------------HVAP--------P-------- 407 (483)
T ss_pred HHHHHHHHHHHHHHHHhCccccCcEEEEEEECCCC------cCc---------------CCCC--------C--------
Confidence 6678888888887765 47899999999 772 211 0000 0
Q ss_pred cccCCCCCCcccccCCCCCCccCccceeeEEcCCCCC---CCCccccchHHHHHHHhcCCCC
Q psy2773 144 ATSRDASFHYPALVPAKDETHGGDDVMVYARGPWSHL---FTGSYEQNFIPIAMGFASRVGP 202 (236)
Q Consensus 144 ~~~~~~~~~~~~~v~~~s~~HTg~dVpv~A~Gp~a~~---f~G~~dnTdI~~~i~~Al~i~~ 202 (236)
..-.|. .|.-||.+++.|+++. ....++.++|.+.|.+.+||..
T Consensus 408 -----------k~~~~g----gG~RVP~IVisP~~k~G~v~~~~~dh~SiL~Tie~~~GL~~ 454 (483)
T TIGR03397 408 -----------KGDRWG----PGTRIPAIVVSPFAKKGYVDHTPYDTTSILRFITRRFGLPP 454 (483)
T ss_pred -----------CcCCCC----CccEEEEEEEECCCCCCcEeCceeeeehHHHHHHHHhCCCC
Confidence 000122 2556999999998732 3456788999999999999987
No 42
>PRK10649 hypothetical protein; Provisional
Probab=93.78 E-value=0.92 Score=45.29 Aligned_cols=35 Identities=11% Similarity=0.108 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcC--CCCeEEEEeccCCC
Q psy2773 64 YALDETVELAKAVSVAVNLTS--EKDTLIVVTADHAH 98 (236)
Q Consensus 64 ~~~~e~~~~D~av~~~l~~~~--~~dTLivvTaDH~~ 98 (236)
.....+...|..|+.+++.++ .++|+||.+||||-
T Consensus 428 ~Y~nsI~y~D~~l~~ii~~Lk~~~~nt~iiy~SDHGe 464 (577)
T PRK10649 428 DYDNANLYNDHVVASLIKDFKATDPNGFLVYFSDHGE 464 (577)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCCCCeEEEEECCCCc
Confidence 456678889999999999887 36899999999996
No 43
>COG1524 Uncharacterized proteins of the AP superfamily [General function prediction only]
Probab=91.95 E-value=0.13 Score=49.12 Aligned_cols=57 Identities=19% Similarity=0.272 Sum_probs=44.4
Q ss_pred eEEEEeeccccccccccC--ChHHHHHHHHHHHHHHHHHHHhcCC----CCeEEEEeccCCCc
Q psy2773 43 GYFLFVEGGHIDTAHHNN--TPRYALDETVELAKAVSVAVNLTSE----KDTLIVVTADHAHT 99 (236)
Q Consensus 43 Gffl~vEgg~iD~agH~~--d~~~~~~e~~~~D~av~~~l~~~~~----~dTLivvTaDH~~g 99 (236)
.-++++.--.+|++||.. +.......+.++|..++.+++..+. ++++++|+||||..
T Consensus 218 p~~~l~~~~~iD~~~H~~G~~s~~~~~~~~~~d~~l~~ll~~l~~~~~~~~~~~ii~sDHG~~ 280 (450)
T COG1524 218 PDLLLVYLPNIDAIGHKYGPDSPEYAEAVREVDSLLGELLELLKKRGLYEEYLVIITSDHGMS 280 (450)
T ss_pred cchhhhhccccchhhhccCCCCHHHHhhhhhhhhhHHHHHHHHHhhccccceEEEEecccccc
Confidence 445555556799999955 5567777888999999998887653 45999999999983
No 44
>KOG2124|consensus
Probab=89.49 E-value=1 Score=46.83 Aligned_cols=57 Identities=28% Similarity=0.364 Sum_probs=41.6
Q ss_pred cCCeEEEEeeccccccccccCCh--HHHHHHHHHHHHHHHHHHHhc----CCCCeEEEEeccCCC
Q psy2773 40 EQKGYFLFVEGGHIDTAHHNNTP--RYALDETVELAKAVSVAVNLT----SEKDTLIVVTADHAH 98 (236)
Q Consensus 40 ~~kGffl~vEgg~iD~agH~~d~--~~~~~e~~~~D~av~~~l~~~----~~~dTLivvTaDH~~ 98 (236)
+.--||+++-| +|-+||.+.| ....+.+.-.|+-|..+.+.. .++.|.-+.|||||-
T Consensus 197 ~kvVfflhLlg--~dt~gH~~~P~s~~y~~nl~~~d~~i~~~y~l~e~~fnD~kTayi~TaDhgm 259 (883)
T KOG2124|consen 197 DKIVFFLHLLG--IDTAGHAHRPYSVEYRENLKYTDKGIRELYDLFENYFNDGKTAYIFTADHGM 259 (883)
T ss_pred CceEEEEeecC--cCccccccCCCcHHHHHHhhcCCccHHHHHHHHHHHhcCCcceEEEehhccc
Confidence 34468888875 8999998866 455566667777666666543 367799999999985
No 45
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=88.50 E-value=2.3 Score=39.75 Aligned_cols=71 Identities=24% Similarity=0.242 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcC----CCCeEEEEeccCCCcc
Q psy2773 26 LAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTS----EKDTLIVVTADHAHTM 100 (236)
Q Consensus 26 L~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~----~~dTLivvTaDH~~gl 100 (236)
+...+..|..+++..-. | ++|+-+. |--|.+.....-.-+.++|++|..+++-++ .++|+||++||-|=.+
T Consensus 231 ~~~~~l~a~~~~~~g~~-v-~~V~~gG--wDTH~~~~~~~~~ll~~L~~alaaf~~dL~~~g~~d~t~vv~~SEFGRt~ 305 (392)
T PF07394_consen 231 FGQQLLLARRLIEAGVR-V-VFVSLGG--WDTHSNQGNRHARLLPELDQALAAFIQDLKERGLLDDTLVVTMSEFGRTP 305 (392)
T ss_pred HHHHHHHHHHHhhcCCE-E-EEECCCC--ccCccccHhHHHHHHHHHHHHHHHHHHHHHhcCCcCceEEEEeeecCCCc
Confidence 44444555555554443 3 5666554 777989888888889999999998887554 4789999999876533
No 46
>KOG3867|consensus
Probab=84.98 E-value=1.2 Score=44.15 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCeEEEEeccCCC
Q psy2773 63 RYALDETVELAKAVSVAVNLTS----EKDTLIVVTADHAH 98 (236)
Q Consensus 63 ~~~~~e~~~~D~av~~~l~~~~----~~dTLivvTaDH~~ 98 (236)
.....-+.++|..|+.+++.++ .++|+|+.|||||-
T Consensus 269 ~~y~~~V~~mD~~VG~ildaL~~~gl~nnTiv~FtSDnG~ 308 (528)
T KOG3867|consen 269 GLYGDMVSEMDWSVGRILDALDDLGLANNTLVIFTSDNGG 308 (528)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEeCCCCc
Confidence 4455678899999999998776 37899999999986
No 47
>COG1368 MdoB Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]
Probab=79.85 E-value=4.2 Score=41.08 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=51.3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCeEE-EEeec-----------cc---ccc---ccccCChHHHHHHHHHHHHHHHHHHHhc
Q psy2773 22 SQPTLAEMTRTAIRLLEKEQKGYF-LFVEG-----------GH---IDT---AHHNNTPRYALDETVELAKAVSVAVNLT 83 (236)
Q Consensus 22 ~~PsL~emt~~al~~L~~~~kGff-l~vEg-----------g~---iD~---agH~~d~~~~~~e~~~~D~av~~~l~~~ 83 (236)
.-.+-++|..++++.|++.++.|| .+|=- .+ ++. +.+ -.....+.+...|++++..++++
T Consensus 397 ~G~sD~~l~~~~~~~l~~~~~Pfy~~~iTlsnH~Pf~~~~~~~~~~~~~~~~~~~--~l~~y~~~~~y~D~al~~F~~~l 474 (650)
T COG1368 397 WGLSDKDLFKESLPLLKKLKKPFFSFVITLSNHGPFELPEGKRNELLEEPLSAST--ALANYLQAVHYADEALGQFIDKL 474 (650)
T ss_pred CCCchHHHHHHHHHHHHhcCCChHheEEeccCCCCCCCChhhhcccccccCcCcc--cccchhhhhhhHHHHHHHHHHHH
Confidence 456778899999999998666444 33311 00 111 111 12344556788999999999998
Q ss_pred C----CCCeEEEEeccCCC
Q psy2773 84 S----EKDTLIVVTADHAH 98 (236)
Q Consensus 84 ~----~~dTLivvTaDH~~ 98 (236)
+ .++|.+|+++||.-
T Consensus 475 kk~~~~~~sviv~~GDH~~ 493 (650)
T COG1368 475 KKSGLYKNSVIVLYGDHYG 493 (650)
T ss_pred HhcCCCCCcEEEEECCCCC
Confidence 7 27899999999974
No 48
>COG3379 Uncharacterized conserved protein [Function unknown]
Probab=78.86 E-value=8.3 Score=37.35 Aligned_cols=48 Identities=19% Similarity=0.287 Sum_probs=36.2
Q ss_pred ccccccccC----------------ChHHHHHHH-HHHHHHHHHHHHhcCCCCeEEEEeccCCCc
Q psy2773 52 HIDTAHHNN----------------TPRYALDET-VELAKAVSVAVNLTSEKDTLIVVTADHAHT 99 (236)
Q Consensus 52 ~iD~agH~~----------------d~~~~~~e~-~~~D~av~~~l~~~~~~dTLivvTaDH~~g 99 (236)
.+|+..|++ ..+..+.+. .-+|+.|+..++.+.-++|.++|.||||-+
T Consensus 201 gTDRv~H~~w~y~dp~H~lypg~~n~yEnvi~eyy~LvD~~IG~~~~~i~~~e~~l~vvSDHGf~ 265 (471)
T COG3379 201 GTDRVHHALWKYLDPEHPLYPGEQNKYENVIPEYYSLVDKYIGLKLEIIGFEETYLTVVSDHGFK 265 (471)
T ss_pred ehhHHhhhhhhhcCccccCCcccCchHhHHHHHHHHHHHHHHHHHHHhccccceEEEEEeccccc
Confidence 589888865 224455543 347899999999887688999999999973
No 49
>PRK13364 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=69.01 E-value=4.2 Score=37.03 Aligned_cols=31 Identities=13% Similarity=0.156 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhcC--CCCeEEEEeccCCCcc
Q psy2773 70 VELAKAVSVAVNLTS--EKDTLIVVTADHAHTM 100 (236)
Q Consensus 70 ~~~D~av~~~l~~~~--~~dTLivvTaDH~~gl 100 (236)
.++.++++.+-++++ .+|++||++.||.+.+
T Consensus 31 ~~v~~a~~~~~~~v~~~~PDvvVvis~dH~~~f 63 (278)
T PRK13364 31 KPFFDGFPPVREWLEKVKPDVAVVFYNDHGLNF 63 (278)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEECCchHhhh
Confidence 355566666666554 5789999999999863
No 50
>PRK13366 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=68.80 E-value=5.3 Score=36.50 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHhcC--CCCeEEEEeccCCCccee
Q psy2773 69 TVELAKAVSVAVNLTS--EKDTLIVVTADHAHTMMI 102 (236)
Q Consensus 69 ~~~~D~av~~~l~~~~--~~dTLivvTaDH~~gltl 102 (236)
..++.++++.+-++++ .+|++||+.+||.+++.+
T Consensus 30 ~~~~~~a~~~i~~~i~~~~PDvvVii~~dH~~~f~~ 65 (284)
T PRK13366 30 WQPVFKGYEFSKQWEKEEKPDVIFLVYNDHATAFSL 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEcCCcHHhhcc
Confidence 3355566666666664 578999999999886543
No 51
>PF02995 DUF229: Protein of unknown function (DUF229); InterPro: IPR004245 Members of this family are uncharacterised with a long conserved region that may contain several domains.
Probab=65.15 E-value=24 Score=34.66 Aligned_cols=28 Identities=14% Similarity=0.223 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhcC----CCCeEEEEeccCCC
Q psy2773 71 ELAKAVSVAVNLTS----EKDTLIVVTADHAH 98 (236)
Q Consensus 71 ~~D~av~~~l~~~~----~~dTLivvTaDH~~ 98 (236)
.+|+.+...++... -++|+||+.||||.
T Consensus 313 ~~D~~~~~~l~~~~~~g~l~nT~vi~~SDHG~ 344 (497)
T PF02995_consen 313 SLDDDLLDFLEKLQEEGVLDNTFVIFMSDHGL 344 (497)
T ss_pred HHHHHHHHHHHHhhhcCcccccEEEEEcCCCc
Confidence 45665554444333 37899999999998
No 52
>PF04185 Phosphoesterase: Phosphoesterase family; InterPro: IPR007312 This entry includes both bacterial phospholipase C enzymes (3.1.4.3 from EC) and eukaryotic acid phosphatases 3.1.3.2 from EC.; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 2D1G_B.
Probab=63.98 E-value=11 Score=35.31 Aligned_cols=35 Identities=14% Similarity=0.117 Sum_probs=23.2
Q ss_pred CccceeeEEcCCCCC---CCCccccchHHHHHHHhcCC
Q psy2773 166 GDDVMVYARGPWSHL---FTGSYEQNFIPIAMGFASRV 200 (236)
Q Consensus 166 g~dVpv~A~Gp~a~~---f~G~~dnTdI~~~i~~Al~i 200 (236)
|.-||.++.+|.+.. .+..+|.|-|-+.|.+.+||
T Consensus 338 G~RVP~ivISP~~k~G~v~~~~ydh~Silrtie~~~gL 375 (376)
T PF04185_consen 338 GPRVPAIVISPYAKGGTVDHTPYDHTSILRTIEERFGL 375 (376)
T ss_dssp --B--EEEESTTB-TTEEE---EETHHHHHHHHHHHT-
T ss_pred cccCCeEEeCCCCCCCcEeCCccchhHHHHHHHHHhCC
Confidence 567999999998764 56688999999999998887
No 53
>cd07949 PCA_45_Doxase_B_like_1 The B subunit of unknown Class III extradiol dioxygenases with similarity to Protocatechuate 4,5-dioxygenase. This subfamily is composed of proteins of unknown function with similarity to the B subunit of Protocatechuate 4,5-dioxygenase (LigAB). LigAB belongs to the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Dioxygenases play key roles in the degradation of aromatic compounds. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=62.40 E-value=5.8 Score=35.98 Aligned_cols=33 Identities=18% Similarity=0.059 Sum_probs=22.8
Q ss_pred ccceeeEEcCCCCCCCCc---cccchHHHHHHHhcC
Q psy2773 167 DDVMVYARGPWSHLFTGS---YEQNFIPIAMGFASR 199 (236)
Q Consensus 167 ~dVpv~A~Gp~a~~f~G~---~dnTdI~~~i~~Al~ 199 (236)
..|.|.|.|=-||++.+- +-|.+.=+.+.+++.
T Consensus 180 ~rv~iiaSG~lSH~l~~~~~g~~~~~fD~~~~~~l~ 215 (276)
T cd07949 180 LRVVVLGTGGLSHQLDGERAGFINKDFDRYCLDKMV 215 (276)
T ss_pred CCEEEEEeCccccCCCCCCcccchHHHHHHHHHHHh
Confidence 468889999888887442 124566667777776
No 54
>cd07364 PCA_45_Dioxygenase_B Subunit B of the Class III extradiol dioxygenase, Protocatechuate 4,5-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of protocatechuate. Protocatechuate 4,5-dioxygenase (LigAB) catalyzes the oxidization and subsequent ring-opening of protocatechuate (or 3,4-dihydroxybenzoic acid, PCA), an intermediate in the breakdown of lignin and other compounds. Protocatechuate 4,5-dioxygenase is an aromatic ring opening dioxygenase belonging to the class III extradiol enzyme family, a group of enyzmes that cleaves aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon using a non-heme Fe(II). LigAB is composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. The B subunit (LigB) is the catalytic subunit of LigAB.
Probab=54.91 E-value=13 Score=33.82 Aligned_cols=31 Identities=29% Similarity=0.304 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhcC--CCCeEEEEeccCCCcce
Q psy2773 71 ELAKAVSVAVNLTS--EKDTLIVVTADHAHTMM 101 (236)
Q Consensus 71 ~~D~av~~~l~~~~--~~dTLivvTaDH~~glt 101 (236)
++.++++.+-++++ .+||+||+.+||.+.+.
T Consensus 32 ~~~~a~~~~~~~~~~~~pD~vVvi~~dH~~~f~ 64 (277)
T cd07364 32 PLFKGYQPARDWIKKNKPDVAIIVYNDHASAFD 64 (277)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEcCchHHhhc
Confidence 34445555555553 57899999999987543
No 55
>COG4102 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.59 E-value=66 Score=30.78 Aligned_cols=80 Identities=21% Similarity=0.139 Sum_probs=54.9
Q ss_pred CCCCCHHHHHHHHHHHHHh---cCCeEEEEeeccccccccccCC---hHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEE
Q psy2773 21 ASQPTLAEMTRTAIRLLEK---EQKGYFLFVEGGHIDTAHHNNT---PRYALDETVELAKAVSVAVNLTS--EKDTLIVV 92 (236)
Q Consensus 21 ~~~PsL~emt~~al~~L~~---~~kGffl~vEgg~iD~agH~~d---~~~~~~e~~~~D~av~~~l~~~~--~~dTLivv 92 (236)
...++..|.+++--..|-. ...=|+|-++++ -=|.|. .......+-.+|.+++..+.-.. ++||+|++
T Consensus 245 t~~~~g~~qa~~vaa~l~~~~~gp~vaalsl~gf----DTH~nq~~aq~~La~ql~~~da~l~a~~t~lG~~w~dt~i~t 320 (418)
T COG4102 245 TQTGSGMEQARQVAATLGTLGPGPQVAALSLGGF----DTHANQNDAQGRLATQLGGLDAALDAFETELGARWKDTVIVT 320 (418)
T ss_pred CCCcHHHHHHHHHHhhhcccCCCceEEEEeecCc----cccccccchhhHHHHHhcchHHHHHHHHhhccccccceEEEE
Confidence 4456677776666665543 345688888873 346666 66666777788888887765443 68999999
Q ss_pred eccCCCcceeec
Q psy2773 93 TADHAHTMMISG 104 (236)
Q Consensus 93 TaDH~~gltl~g 104 (236)
.++.|-...+||
T Consensus 321 ~tEFgRtar~Ng 332 (418)
T COG4102 321 ATEFGRTARING 332 (418)
T ss_pred eeccccceeecC
Confidence 998887666554
No 56
>cd07369 PydA_Rs_like PydA is a Class III Extradiol ring-cleavage dioxygenase required for the degradation of 3-hydroxy-4-pyridone (HP). This subfamily is composed of Rhizobium sp. PydA and similar proteins. PydA is required for the degradation of 3-hydroxy-4-pyridone (HP), an intermediate in the Leucaena toxin mimosine degradation pathway. It is a member of the class III extradiol dioxygenase family, a group of enzymes that use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=51.93 E-value=16 Score=34.15 Aligned_cols=30 Identities=17% Similarity=0.130 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHhcC--CCCeEEEEeccCCCcc
Q psy2773 71 ELAKAVSVAVNLTS--EKDTLIVVTADHAHTM 100 (236)
Q Consensus 71 ~~D~av~~~l~~~~--~~dTLivvTaDH~~gl 100 (236)
+.-++++.+-++++ .+|++||+.+||.+++
T Consensus 30 ~~~~a~~~l~~~v~~~~PD~iVV~~sdH~~~~ 61 (329)
T cd07369 30 RTEEATLKLGRTLTAARPDVIIAFLDDHFENH 61 (329)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEcCCchhhh
Confidence 34445555555443 5789999999998843
No 57
>PRK13367 protocatechuate 4,5-dioxygenase; Provisional
Probab=51.27 E-value=15 Score=35.66 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhcC--CCCeEEEEeccCCCccee
Q psy2773 69 TVELAKAVSVAVNLTS--EKDTLIVVTADHAHTMMI 102 (236)
Q Consensus 69 ~~~~D~av~~~l~~~~--~~dTLivvTaDH~~gltl 102 (236)
..++.+++..+.+|++ .+|-+|||.+||.+++-+
T Consensus 30 ~~~v~~~~~~~r~~l~~~~PDvvVv~~nDH~~~Ff~ 65 (420)
T PRK13367 30 WAPIFESFAPLRRWLEEKKPDVLLYIFNDHVTSFFF 65 (420)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEccchhhhcCc
Confidence 4467788888888885 688999999999997543
No 58
>cd07366 3MGA_Dioxygenase Subunit B of the Class III Extradiol ring-cleavage dioxygenase, 3-O-Methylgallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 3-O-Methylgallate. 3-O-Methylgallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of 3-O-Methylgallate (3MGA) between carbons 2 and 3. 3-O-Methylgallate Dioxygenase is a key enzyme in the syringate degradation pathway, in which the syringate is first converted to 3-O-Methylgallate by O-demethylase. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which uses a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=49.96 E-value=12 Score=35.00 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhcC--CCCeEEEEeccCCCc
Q psy2773 71 ELAKAVSVAVNLTS--EKDTLIVVTADHAHT 99 (236)
Q Consensus 71 ~~D~av~~~l~~~~--~~dTLivvTaDH~~g 99 (236)
++.+++..+-++++ .+|++||++.||.+.
T Consensus 70 ~~~~a~~~~~~~i~~~~PDvlVIispDH~~~ 100 (328)
T cd07366 70 RCQAALDRLADFIRAARIDVAVIVGDDQKEL 100 (328)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEcCccHhh
Confidence 33355555555443 578999999999863
No 59
>cd07950 Gallate_Doxase_N The N-terminal domain of the Class III extradiol dioxygenase, Gallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of gallate. Gallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of gallate, an intermediate in the degradation of the aromatic compound, syringate. The reaction product of gallate dioxygenase is 4-oxalomesaconate. The amino acid sequence of the N-terminal and C-terminal regions of gallate dioxygenase exhibits homology with the sequence of PCA 4,5-dioxygenase B (catalytic) and A subunits, respectively. The enzyme is estimated to be a homodimer according to the Escherichia coli enzyme. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. In this subfamily, the subunits A and B are fused to make a single polypeptide chain. The dimer interface for this subfamily may resemble the tetramer interface of classical LigAB en
Probab=49.11 E-value=16 Score=33.13 Aligned_cols=33 Identities=18% Similarity=0.132 Sum_probs=22.3
Q ss_pred ccceeeEEcCCCCCCCC---ccccchHHHHHHHhcC
Q psy2773 167 DDVMVYARGPWSHLFTG---SYEQNFIPIAMGFASR 199 (236)
Q Consensus 167 ~dVpv~A~Gp~a~~f~G---~~dnTdI~~~i~~Al~ 199 (236)
..|-|.|.|=-||++.+ -+.|.+.-+.+.+.+.
T Consensus 181 ~rv~iIaSG~lSH~l~~~~~g~~~~~~D~~f~~~l~ 216 (277)
T cd07950 181 LKVAVVGTGGLSHQVHGERAGFNNTEWDMEFLDLIE 216 (277)
T ss_pred CCEEEEEcCccccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 46888888888888852 1234566666666665
No 60
>PRK13365 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=48.62 E-value=15 Score=33.37 Aligned_cols=32 Identities=19% Similarity=0.059 Sum_probs=22.2
Q ss_pred ccceeeEEcCCCCCCCC----ccccchHHHHHHHhcC
Q psy2773 167 DDVMVYARGPWSHLFTG----SYEQNFIPIAMGFASR 199 (236)
Q Consensus 167 ~dVpv~A~Gp~a~~f~G----~~dnTdI~~~i~~Al~ 199 (236)
..|.|.|.|=-||++.+ .. |.+.-+.+.+.+.
T Consensus 181 ~rV~iIaSG~LSH~l~~~~~g~~-~~~~D~~f~~~l~ 216 (279)
T PRK13365 181 LRVVVVGTGGLSHQIHGERSGFN-NTEWDMEFLDRFQ 216 (279)
T ss_pred CCEEEEEeCccccCCCCCCccCC-CHHHHHHHHHHHh
Confidence 46889999988888763 33 5566666666664
No 61
>PRK13373 putative dioxygenase; Provisional
Probab=44.87 E-value=25 Score=33.25 Aligned_cols=31 Identities=19% Similarity=0.196 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhcC--CCCeEEEEeccCCCcce
Q psy2773 71 ELAKAVSVAVNLTS--EKDTLIVVTADHAHTMM 101 (236)
Q Consensus 71 ~~D~av~~~l~~~~--~~dTLivvTaDH~~glt 101 (236)
++.++++.+-++++ ++|.+||+.+||-+++.
T Consensus 30 ~v~~a~~~ir~~i~e~kPDVvVv~~nDH~~~Ff 62 (344)
T PRK13373 30 RLLQAADRLGRSLDAARPDVIIAFLDDHFENHF 62 (344)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEccchhhhhc
Confidence 55666666666664 67899999999998653
No 62
>PRK13372 pcmA protocatechuate 4,5-dioxygenase; Provisional
Probab=43.57 E-value=22 Score=34.64 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhcC--CCCeEEEEeccCCCccee
Q psy2773 69 TVELAKAVSVAVNLTS--EKDTLIVVTADHAHTMMI 102 (236)
Q Consensus 69 ~~~~D~av~~~l~~~~--~~dTLivvTaDH~~gltl 102 (236)
..++.+++..+.+|+. .+|-+|||.+||.+++-+
T Consensus 177 ~~~v~~~~~~~r~~l~~~~PDVvVi~~nDH~~~Ff~ 212 (444)
T PRK13372 177 WKKLFAGYDLSREWAKEHLPDVIILVYNDHATAFDL 212 (444)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEccchhhhcCc
Confidence 4467788888888874 688999999999997543
No 63
>cd07368 PhnC_Bs_like PhnC is a Class III Extradiol ring-cleavage dioxygenase involved in the polycyclic aromatic hydrocarbon (PAH) catabolic pathway. This subfamily is composed of Burkholderia sp. PhnC and similar poteins. PhnC is one of nine protein products encoded by the phn locus. These proteins are involved in the polycyclic aromatic hydrocarbon (PAH) catabolic pathway. PhnC is a member of the class III extradiol dioxygenase family, a group os enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=40.75 E-value=28 Score=31.50 Aligned_cols=26 Identities=15% Similarity=0.304 Sum_probs=18.4
Q ss_pred HHHHHHHHhcC--CCCeEEEEeccCCCc
Q psy2773 74 KAVSVAVNLTS--EKDTLIVVTADHAHT 99 (236)
Q Consensus 74 ~av~~~l~~~~--~~dTLivvTaDH~~g 99 (236)
++++.+-++++ .+|++||++.||.+.
T Consensus 33 ~a~~~~~~~v~~~~pD~ivvi~~dH~~~ 60 (277)
T cd07368 33 HAYAICAERLAALQVTSVVVIGDDHYTL 60 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCchHhh
Confidence 45555555443 578999999999874
No 64
>cd07367 CarBb CarBb is the B subunit of the Class III Extradiol ring-cleavage dioxygenase, 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBb is the B subunit of 2-aminophenol 1,6-dioxygenase (CarB), which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. It is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, it has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=40.50 E-value=33 Score=30.78 Aligned_cols=29 Identities=17% Similarity=0.340 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhcC--CCCeEEEEeccCCCc
Q psy2773 71 ELAKAVSVAVNLTS--EKDTLIVVTADHAHT 99 (236)
Q Consensus 71 ~~D~av~~~l~~~~--~~dTLivvTaDH~~g 99 (236)
++-++++.+-+.+. .+|++||+++||.+.
T Consensus 26 ~~~~al~~~~~~l~~~~Pd~ivvis~dH~~~ 56 (268)
T cd07367 26 RVVQGMAEIGRRVRESRPDVLVVISSDHLFN 56 (268)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEeCchhhh
Confidence 33344444444332 578999999999874
No 65
>PF05991 NYN_YacP: YacP-like NYN domain; InterPro: IPR010298 This family consists of several hypothetical bacterial proteins as well as some uncharacterised sequences from Arabidopsis thaliana. The function of this family is unknown.
Probab=37.59 E-value=33 Score=28.62 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHhc----CCeEEEEeecccccc-ccccCCh----HHHHHHHHHHHHHHHHHHHhcCC-CCeEEEEe
Q psy2773 24 PTLAEMTRTAIRLLEKE----QKGYFLFVEGGHIDT-AHHNNTP----RYALDETVELAKAVSVAVNLTSE-KDTLIVVT 93 (236)
Q Consensus 24 PsL~emt~~al~~L~~~----~kGffl~vEgg~iD~-agH~~d~----~~~~~e~~~~D~av~~~l~~~~~-~dTLivvT 93 (236)
-+|...=.+-++.|... ..=..+++.|...-. ..+...+ --...+-..-|..|...+.-... +..++|||
T Consensus 22 ~~l~~aR~~Li~~L~~y~~~~~~~v~VVFDa~~~~~~~~~~~~~~gi~Vvft~~~~tAD~~Ie~~v~~~~~~~~~v~VVT 101 (166)
T PF05991_consen 22 GDLEAARERLIEMLSEYAQFSGYEVIVVFDAYKVPGGSEEREEYGGIEVVFTKEGETADDYIERLVRELKNRPRQVTVVT 101 (166)
T ss_pred CCHHHHHHHHHHHHHHHhcccCCEEEEEEeCCcCCCCCceeeeeCceEEEECCCCCCHHHHHHHHHHHhccCCCeEEEEe
Confidence 45666666777777641 223557777632222 1111000 00011123567777666654443 67999999
Q ss_pred ccCCC
Q psy2773 94 ADHAH 98 (236)
Q Consensus 94 aDH~~ 98 (236)
|||.-
T Consensus 102 SD~~i 106 (166)
T PF05991_consen 102 SDREI 106 (166)
T ss_pred CCHHH
Confidence 99963
No 66
>COG0101 TruA Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]
Probab=35.11 E-value=88 Score=28.42 Aligned_cols=58 Identities=14% Similarity=0.092 Sum_probs=42.8
Q ss_pred CCceEeeec-CCCCCcccCCCCCCCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCC
Q psy2773 1 MTSFKSLFA-SDHLHYNLGAPASQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNT 61 (236)
Q Consensus 1 ~~~lLGLFa-~~~l~y~~dr~~~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d 61 (236)
|.++.-.++ ++...+=+.|+++.||.++..++||..+..... -++=+||+|..=|+..
T Consensus 1 m~ri~l~iaYdGt~f~G~Q~Qp~~~TVQ~~le~aL~~i~~~~~---~i~~AGRTD~GVHA~g 59 (266)
T COG0101 1 MKRIALKIAYDGTRFHGWQRQPNVRTVQGELEKALSKIGGESV---RVIGAGRTDAGVHALG 59 (266)
T ss_pred CceEEEEEEEcCCceeeeccCCCCCCHHHHHHHHHHHhcCCcc---eeEEecCCCcCccccc
Confidence 444455555 455555667777779999999999999976553 4566899999999874
No 67
>PRK13370 mhpB 3-(2,3-dihydroxyphenyl)propionate dioxygenase; Provisional
Probab=34.30 E-value=54 Score=30.37 Aligned_cols=32 Identities=13% Similarity=0.316 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhcC--CCCeEEEEeccCCCc
Q psy2773 68 ETVELAKAVSVAVNLTS--EKDTLIVVTADHAHT 99 (236)
Q Consensus 68 e~~~~D~av~~~l~~~~--~~dTLivvTaDH~~g 99 (236)
...+++++++.+-+++. .+|++||++.||.+.
T Consensus 23 ~~~~v~~a~~~l~~~l~~~~PD~iVIigpdH~~~ 56 (313)
T PRK13370 23 VLAEVNAVIAAAREFVAAFDPELVVLFAPDHYNG 56 (313)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEcCCcccc
Confidence 35566778887777765 489999999999885
No 68
>PF05763 DUF835: Protein of unknown function (DUF835); InterPro: IPR008553 The members of this archaebacterial protein entry are around 250-300 amino acid residues in length. The function of these proteins is not known.
Probab=33.52 E-value=1.8e+02 Score=23.59 Aligned_cols=65 Identities=17% Similarity=0.334 Sum_probs=40.7
Q ss_pred CC-CHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCC
Q psy2773 23 QP-TLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVTADHA 97 (236)
Q Consensus 23 ~P-sL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~ 97 (236)
.| .|..++....+.|+++.++ .++++| +++.-=.|+.+..+ +++..+.|++-..+..+|++.|-+
T Consensus 56 ~Pt~L~~l~~~i~~fl~~~~~~-vViiD~--lEYL~l~NgF~~v~-------KFL~~LkD~~~~~~~~lIl~~~~~ 121 (136)
T PF05763_consen 56 SPTNLHKLLDTIVRFLKENGNG-VVIIDG--LEYLILENGFESVL-------KFLASLKDYALLNNGTLILVVDPE 121 (136)
T ss_pred CchhhHHHHHHHHHHHHhCCCc-EEEEec--HHHHHHHcCHHHHH-------HHHHHhHHHeeccCCEEEEEEChh
Confidence 35 6899999999999986556 588886 66654445433332 334445555544455566666644
No 69
>PRK13363 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=32.35 E-value=39 Score=31.68 Aligned_cols=25 Identities=16% Similarity=0.226 Sum_probs=17.4
Q ss_pred HHHHHHHHhcC--CCCeEEEEeccCCC
Q psy2773 74 KAVSVAVNLTS--EKDTLIVVTADHAH 98 (236)
Q Consensus 74 ~av~~~l~~~~--~~dTLivvTaDH~~ 98 (236)
+++..+-++++ .+|++||++.||-+
T Consensus 75 ~a~~~~~~~i~~~~PDvlViispdh~~ 101 (335)
T PRK13363 75 AAIERMRDAIEAARIDVAVIVGNDQME 101 (335)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence 45555555443 57899999999954
No 70
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.
Probab=26.72 E-value=3.9e+02 Score=27.70 Aligned_cols=37 Identities=19% Similarity=0.269 Sum_probs=32.4
Q ss_pred CccceeeEEcCCCCC---CCCccccchHHHHHHHhcCCCC
Q psy2773 166 GDDVMVYARGPWSHL---FTGSYEQNFIPIAMGFASRVGP 202 (236)
Q Consensus 166 g~dVpv~A~Gp~a~~---f~G~~dnTdI~~~i~~Al~i~~ 202 (236)
|.-||.+...|++.. .+.++|.|-|-+.|.+.+||..
T Consensus 389 G~RVP~iVISPwsrgG~V~s~~~DHtSvLrflE~~fgl~~ 428 (690)
T TIGR03396 389 GPRVPMYVISPWSKGGWVNSQVFDHTSVLRFLEKRFGVRE 428 (690)
T ss_pred cceeeEEEECCCCCCCcccCccccHHHHHHHHHHHhCCCC
Confidence 667999999999874 5778999999999999999875
No 71
>PRK00021 truA tRNA pseudouridine synthase A; Validated
Probab=25.79 E-value=1.6e+02 Score=25.96 Aligned_cols=58 Identities=16% Similarity=0.166 Sum_probs=41.5
Q ss_pred CCceEeeecCCCCCcc-cCCCCCCCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCC
Q psy2773 1 MTSFKSLFASDHLHYN-LGAPASQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNT 61 (236)
Q Consensus 1 ~~~lLGLFa~~~l~y~-~dr~~~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d 61 (236)
|.+++=.++.....|. +.++++.++.++..++||..+...+ +-++-+||+|..=|+..
T Consensus 1 m~~~~l~i~YdGt~y~G~q~q~~~~TVq~~le~aL~~~~~~~---~~~~~agRTD~GVHA~~ 59 (244)
T PRK00021 1 MMRIALTIEYDGTNFHGWQRQPNGRTVQGELEKALSKLAGEP---VRVIGAGRTDAGVHALG 59 (244)
T ss_pred CeEEEEEEEECCCccceeeeCCCCCCHHHHHHHHHHHHhCCC---eEEEEEccCCCcccccC
Confidence 4445555665555553 5555667999999999999887533 34677999999999874
No 72
>PF10126 Nit_Regul_Hom: Uncharacterized protein, homolog of nitrogen regulatory protein PII; InterPro: IPR019296 This family consists of various hypothetical archaeal proteins. It includes a putative nitrogen regulatory protein PII homolog.
Probab=25.04 E-value=3e+02 Score=21.90 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhcC-CeEEEEe-ec-cccccccccCChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Q psy2773 28 EMTRTAIRLLEKEQ-KGYFLFV-EG-GHIDTAHHNNTPRYALDETVELAKAVSVAVNLTSEKDTLIVVT 93 (236)
Q Consensus 28 emt~~al~~L~~~~-kGffl~v-Eg-g~iD~agH~~d~~~~~~e~~~~D~av~~~l~~~~~~dTLivvT 93 (236)
|=..+|+++|+... .|||++= .| +.-||.|-.- -++-+.|++.+-++.+ ++.+|-|
T Consensus 14 eNlGKaINaLte~GITGFyl~eYkGmSP~~wkgf~l--------~EDpe~ai~~I~d~s~--~aV~I~T 72 (110)
T PF10126_consen 14 ENLGKAINALTEGGITGFYLHEYKGMSPQDWKGFLL--------DEDPEMAIKAINDLSE--NAVLIGT 72 (110)
T ss_pred hHHHHHHHHHHhcCccEEEeEeecCCChHHhcCccc--------ccCHHHHHHHHHHhcc--CcEEEEE
Confidence 44678999998744 7998752 22 3345555422 1455666766666433 4566554
No 73
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=24.24 E-value=69 Score=32.15 Aligned_cols=32 Identities=13% Similarity=0.210 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHhcC--CCCeEEEEeccCCCcc
Q psy2773 69 TVELAKAVSVAVNLTS--EKDTLIVVTADHAHTM 100 (236)
Q Consensus 69 ~~~~D~av~~~l~~~~--~~dTLivvTaDH~~gl 100 (236)
+.--|..|..+++.++ .+++.+|=.||||-.+
T Consensus 425 ilYtD~~L~~vi~~Lk~~~~~~~liY~SDHGEsl 458 (555)
T COG2194 425 ILYTDYFLSKLIDQLKDKKDNTSLIYFSDHGESL 458 (555)
T ss_pred hhhhHHHHHHHHHHHHhCCCCeEEEEEcCccHhh
Confidence 4555677788888776 3478999999999644
No 74
>cd07365 MhpB_like Subunit B of the Class III Extradiol ring-cleavage dioxygenase, 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (MhpB), which catalyzes the oxidization and subsequent ring-opening of 2,3-dihydroxyphenylpropionate. 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (MhpB) catalyzes the oxidization and subsequent ring-opening of 2,3-dihydroxyphenylpropionate, yielding the product 2-hydroxy-6-oxo-nona-2,4-diene 1,9-dicarboxylate. It is an essential enzyme in the beta-phenylpropionic degradation pathway, in which beta-phenylpropionic is first hydrolyzed to produce 2,3-dihydroxyphenylpropionate. The enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like class III enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the ca
Probab=24.00 E-value=81 Score=29.16 Aligned_cols=29 Identities=17% Similarity=0.362 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhcC--CCCeEEEEeccCCCc
Q psy2773 71 ELAKAVSVAVNLTS--EKDTLIVVTADHAHT 99 (236)
Q Consensus 71 ~~D~av~~~l~~~~--~~dTLivvTaDH~~g 99 (236)
++.++++.+-+++. .+|++||++.||.+.
T Consensus 26 ~~~~a~~~l~~~l~~~~PD~iVIigphH~~~ 56 (310)
T cd07365 26 EVDAAFAAARAFVAAFDPELVVLFAPDHYNG 56 (310)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEcCCcccc
Confidence 55666666666654 489999999999873
No 75
>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A ....
Probab=22.48 E-value=64 Score=22.56 Aligned_cols=21 Identities=33% Similarity=0.515 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHHhcCCeE
Q psy2773 24 PTLAEMTRTAIRLLEKEQKGY 44 (236)
Q Consensus 24 PsL~emt~~al~~L~~~~kGf 44 (236)
-+|.+|.+.+.+-.++|++||
T Consensus 42 ~~L~~~i~~~w~W~~~np~Gy 62 (62)
T PF13950_consen 42 YSLEDMIRDAWNWQKKNPNGY 62 (62)
T ss_dssp SSHHHHHHHHHHHHHHSTTTT
T ss_pred CCHHHHHHHHHHHHHHCcCCC
Confidence 399999999999999999886
No 76
>COG3885 Uncharacterized conserved protein [Function unknown]
Probab=21.83 E-value=1.2e+02 Score=27.34 Aligned_cols=36 Identities=22% Similarity=0.369 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCcc
Q psy2773 64 YALDETVELAKAVSVAVNLTSEKDTLIVVTADHAHTM 100 (236)
Q Consensus 64 ~~~~e~~~~D~av~~~l~~~~~~dTLivvTaDH~~gl 100 (236)
-.-.++..|-..|..+++-.. .+--+|+.|||+|..
T Consensus 141 l~~~~l~~Fg~~l~~~le~~~-~ki~lIiSaD~aHth 176 (261)
T COG3885 141 LSREILVKFGDNLGKALEEYE-RKISLIISADHAHTH 176 (261)
T ss_pred ccHHHHHHHHHHHHHHHHHhh-cceEEEEeccccccc
Confidence 344578899999988887443 457788999999943
No 77
>PRK12434 tRNA pseudouridine synthase A; Reviewed
Probab=21.63 E-value=2.2e+02 Score=25.16 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=39.8
Q ss_pred CCceEeeecCCCCCcc-cCCCC-CCCCHHHHHHHHHHHHHhcCCeEEEEeeccccccccccCC
Q psy2773 1 MTSFKSLFASDHLHYN-LGAPA-SQPTLAEMTRTAIRLLEKEQKGYFLFVEGGHIDTAHHNNT 61 (236)
Q Consensus 1 ~~~lLGLFa~~~l~y~-~dr~~-~~PsL~emt~~al~~L~~~~kGffl~vEgg~iD~agH~~d 61 (236)
|.+++=.++.....|. +.+++ +.++.++..++||..+...+ .-++=+||+|..=|+..
T Consensus 1 m~~~~l~i~YdGt~y~G~Q~Q~~~~~TVq~~le~aL~~~~~~~---~~~~~agRTD~GVHA~~ 60 (245)
T PRK12434 1 MRNIKLTIQYDGSRYKGWQKLGNNDNTIQGKIESVLSEMTGEE---IEIIGCGRTDAGVHALN 60 (245)
T ss_pred CceEEEEEEECCCccceEeeCCCCCCCHHHHHHHHHHHHhCCC---eEEEEeccCCCCcCccC
Confidence 3344445555544554 45544 37899999999999887543 35556899999999874
No 78
>PRK13358 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=20.21 E-value=1.3e+02 Score=26.78 Aligned_cols=15 Identities=33% Similarity=0.623 Sum_probs=12.9
Q ss_pred CCCeEEEEeccCCCc
Q psy2773 85 EKDTLIVVTADHAHT 99 (236)
Q Consensus 85 ~~dTLivvTaDH~~g 99 (236)
.++++||+++||.+.
T Consensus 42 ~Pd~iViis~~h~~~ 56 (269)
T PRK13358 42 RPDVLVVIGSDHLFN 56 (269)
T ss_pred CCCEEEEEeCchhhh
Confidence 578999999999853
Done!