Query psy2775
Match_columns 785
No_of_seqs 366 out of 3353
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 16:34:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2775.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2775hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 9.9E-74 3.4E-78 639.9 75.9 552 10-650 3-569 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 7.4E-70 2.5E-74 608.6 66.6 542 111-776 3-561 (570)
3 1e07_A Carcinoembryonic antige 100.0 2.1E-67 7.3E-72 599.8 67.5 597 15-772 2-627 (642)
4 3dmk_A DOWN syndrome cell adhe 100.0 7.2E-68 2.5E-72 621.0 58.4 661 10-770 36-794 (816)
5 1e07_A Carcinoembryonic antige 100.0 5.4E-61 1.8E-65 547.1 60.1 513 12-651 112-640 (642)
6 3dmk_A DOWN syndrome cell adhe 100.0 2.8E-60 9.6E-65 556.7 54.5 532 11-650 245-808 (816)
7 3v2a_R Vascular endothelial gr 100.0 2.1E-61 7.3E-66 563.9 15.4 620 10-772 29-743 (772)
8 3v2a_R Vascular endothelial gr 100.0 8.2E-56 2.8E-60 516.7 17.1 533 17-650 131-755 (772)
9 2ec8_A MAST/stem cell growth f 100.0 2.2E-50 7.5E-55 447.8 27.5 452 92-651 19-510 (524)
10 2ec8_A MAST/stem cell growth f 100.0 7.6E-49 2.6E-53 435.4 32.2 423 234-773 35-498 (524)
11 2ocw_A Polymeric-immunoglobuli 100.0 2.8E-46 9.6E-51 421.2 50.2 439 120-651 7-546 (585)
12 2ocw_A Polymeric-immunoglobuli 100.0 3.7E-46 1.3E-50 420.2 50.7 446 16-508 4-549 (585)
13 3qs9_E FL cytokine receptor; i 100.0 2.4E-47 8.2E-52 417.7 39.1 426 122-650 57-509 (527)
14 2rcj_C Light chain; immunoglob 100.0 4.4E-46 1.5E-50 413.1 43.6 445 15-492 3-510 (523)
15 3qs9_E FL cytokine receptor; i 100.0 1.5E-46 5.2E-51 411.4 38.9 426 21-506 57-511 (527)
16 1z7z_I Intercellular adhesion 100.0 3.5E-47 1.2E-51 413.7 33.3 411 118-650 4-448 (450)
17 1z7z_I Intercellular adhesion 100.0 7.7E-47 2.6E-51 411.0 34.2 415 14-506 1-450 (450)
18 2rcj_C Light chain; immunoglob 100.0 1.2E-45 3.9E-50 409.7 36.7 440 242-772 7-511 (523)
19 3kld_A Contactin 4, axcam, BIG 100.0 3.5E-43 1.2E-47 372.7 30.3 352 234-650 4-382 (384)
20 3qs7_E FL cytokine receptor; i 100.0 3.9E-41 1.3E-45 358.9 38.6 348 238-651 51-414 (423)
21 3kld_A Contactin 4, axcam, BIG 100.0 2.4E-41 8.3E-46 358.6 31.3 360 10-409 3-375 (384)
22 3laf_A Deleted in colorectal c 100.0 1.1E-40 3.9E-45 357.2 35.6 354 234-650 20-400 (403)
23 1cs6_A Axonin-1; neural cell a 100.0 1.7E-41 5.9E-46 360.5 28.7 350 234-650 3-381 (382)
24 3p3y_A Neurofascin; IG domains 100.0 1.9E-41 6.6E-46 363.3 29.1 356 234-650 15-402 (404)
25 3laf_A Deleted in colorectal c 100.0 8.2E-41 2.8E-45 358.2 33.9 363 6-410 15-394 (403)
26 3qs7_E FL cytokine receptor; i 100.0 1.6E-40 5.4E-45 354.2 32.5 384 81-507 4-416 (423)
27 1bih_A Hemolin; insect immunit 100.0 4.2E-41 1.4E-45 359.4 27.8 352 234-649 5-394 (395)
28 3p3y_A Neurofascin; IG domains 100.0 1.7E-40 5.8E-45 356.0 28.2 364 8-410 12-396 (404)
29 1cs6_A Axonin-1; neural cell a 100.0 3.8E-40 1.3E-44 350.1 30.1 354 11-409 3-374 (382)
30 2v5m_A Dscam; neurobiology SPL 100.0 2.3E-40 7.9E-45 352.7 27.2 342 235-649 3-387 (388)
31 1bih_A Hemolin; insect immunit 100.0 1.4E-39 4.8E-44 347.6 28.4 364 8-410 2-389 (395)
32 2v5m_A Dscam; neurobiology SPL 100.0 3E-39 1E-43 344.1 28.6 350 11-410 2-382 (388)
33 2rik_A Titin; I-SET IG fold, p 100.0 6.5E-36 2.2E-40 303.4 40.5 274 10-323 3-283 (284)
34 2rik_A Titin; I-SET IG fold, p 100.0 1.3E-35 4.4E-40 301.2 37.7 272 325-650 4-283 (284)
35 1wio_A CD4, T-cell surface gly 100.0 7.8E-37 2.7E-41 321.7 20.2 300 335-770 3-349 (363)
36 1qgc_4 Protein (immunoglobulin 100.0 6.7E-36 2.3E-40 323.7 25.0 360 14-411 3-433 (438)
37 1qgc_4 Protein (immunoglobulin 100.0 4.6E-36 1.6E-40 325.0 23.6 359 238-647 4-435 (438)
38 2yd9_A Receptor-type tyrosine- 100.0 1E-34 3.5E-39 297.5 30.9 282 10-326 4-293 (304)
39 1wio_A CD4, T-cell surface gly 100.0 7.9E-36 2.7E-40 314.0 20.6 304 245-649 4-361 (363)
40 2wim_A N-CAM 2, NCAM2, neural 100.0 2E-33 6.8E-38 286.2 27.1 275 11-327 3-287 (291)
41 1qz1_A Neural cell adhesion mo 100.0 5E-33 1.7E-37 283.2 29.8 274 11-324 1-290 (291)
42 1igt_B IGG2A intact antibody - 100.0 1.9E-33 6.4E-38 304.5 24.8 371 16-405 4-433 (444)
43 2y25_A Myomesin; structural pr 100.0 6.4E-33 2.2E-37 286.3 23.3 292 9-324 4-315 (317)
44 2yd9_A Receptor-type tyrosine- 100.0 2.6E-32 8.9E-37 279.6 27.3 267 325-651 5-291 (304)
45 1hzh_H IGG, immunoglobulin hea 100.0 6.6E-33 2.2E-37 301.3 22.0 370 17-405 5-442 (457)
46 2y25_A Myomesin; structural pr 100.0 1.3E-32 4.5E-37 284.0 23.2 286 326-651 7-315 (317)
47 1igt_B IGG2A intact antibody - 100.0 7.1E-33 2.4E-37 300.0 19.3 366 333-772 7-432 (444)
48 2wim_A N-CAM 2, NCAM2, neural 100.0 1.4E-31 4.7E-36 272.5 27.7 268 326-651 4-284 (291)
49 1iga_A IGA1; immunoglobulin; N 100.0 2.5E-31 8.7E-36 290.0 31.5 375 16-409 5-446 (475)
50 1qz1_A Neural cell adhesion mo 100.0 5.4E-31 1.8E-35 268.2 31.0 271 326-650 2-289 (291)
51 2y23_A Myomesin; structural pr 100.0 3E-31 1E-35 273.1 28.1 280 335-650 10-311 (312)
52 4fqp_A Poliovirus receptor; im 100.0 9.2E-31 3.1E-35 269.2 27.5 275 15-328 3-308 (313)
53 2o26_X MAST/stem cell growth f 100.0 4E-31 1.4E-35 268.8 23.5 265 10-325 10-289 (290)
54 1iga_A IGA1; immunoglobulin; N 100.0 1.7E-30 5.7E-35 283.6 29.5 374 333-780 8-453 (475)
55 1igy_B IGG1 intact antibody MA 100.0 4E-34 1.4E-38 308.6 0.7 367 16-405 3-423 (434)
56 1hzh_H IGG, immunoglobulin hea 100.0 1.5E-31 5.2E-36 290.6 20.7 348 242-640 7-443 (457)
57 1ry7_B FGFR-3, fibroblast grow 100.0 2.1E-32 7.3E-37 284.6 12.0 282 11-329 7-332 (334)
58 2o26_X MAST/stem cell growth f 100.0 1.8E-30 6.1E-35 264.0 24.7 262 326-650 12-287 (290)
59 2y23_A Myomesin; structural pr 100.0 4.2E-30 1.4E-34 264.5 27.1 285 19-323 8-311 (312)
60 3ejj_X Macrophage colony-stimu 100.0 1E-29 3.6E-34 258.3 28.9 272 10-325 2-282 (289)
61 3rjd_A High affinity immunoglo 100.0 1.5E-29 5.1E-34 253.1 29.1 242 12-314 1-249 (262)
62 1igy_B IGG1 intact antibody MA 100.0 5.5E-33 1.9E-37 299.8 0.2 361 333-772 6-422 (434)
63 1itb_B Type 1 interleukin-1 re 100.0 4E-31 1.4E-35 272.4 13.8 274 12-323 5-313 (315)
64 4dep_C Interleukin-1 receptor 100.0 1.8E-30 6.1E-35 271.8 18.4 280 13-328 7-337 (349)
65 3u83_A Poliovirus receptor-rel 100.0 2.7E-29 9.1E-34 260.8 25.8 278 7-326 9-322 (331)
66 3oq3_B IFN-alpha/beta binding 100.0 2.6E-30 8.8E-35 267.6 17.8 263 17-322 34-328 (329)
67 1zvo_C Myeloma immunoglobulin 100.0 7.4E-28 2.5E-32 264.0 35.9 381 17-405 5-491 (512)
68 3oq3_B IFN-alpha/beta binding 100.0 2.8E-29 9.4E-34 259.9 23.3 257 334-649 37-328 (329)
69 3o4o_C Interleukin-1 receptor 100.0 7.9E-31 2.7E-35 273.3 11.5 279 7-322 13-333 (339)
70 3ejj_X Macrophage colony-stimu 100.0 9.1E-29 3.1E-33 251.4 26.0 265 326-650 4-280 (289)
71 4fom_A Poliovirus receptor-rel 100.0 4.3E-30 1.5E-34 263.7 16.1 267 21-326 8-302 (308)
72 2wng_A Tyrosine-protein phosph 100.0 1.8E-28 6.2E-33 253.8 27.9 270 11-315 2-310 (327)
73 2jll_A NCAM2, neural cell adhe 100.0 3.4E-27 1.2E-31 251.0 38.3 349 12-406 1-374 (389)
74 3rjd_A High affinity immunoglo 100.0 1.7E-28 5.7E-33 245.5 25.0 247 328-651 3-260 (262)
75 3mjg_X Beta-type platelet-deri 100.0 2E-28 6.7E-33 248.8 25.5 266 13-326 1-280 (289)
76 4dkd_C Macrophage colony-stimu 100.0 3.2E-29 1.1E-33 255.2 19.5 270 10-325 2-282 (292)
77 1ry7_B FGFR-3, fibroblast grow 100.0 2.3E-30 7.8E-35 269.2 9.5 281 421-773 14-315 (334)
78 4fqp_A Poliovirus receptor; im 100.0 9E-29 3.1E-33 254.4 20.7 260 332-650 6-303 (313)
79 1itb_B Type 1 interleukin-1 re 100.0 4.6E-29 1.6E-33 257.0 18.2 262 334-650 13-313 (315)
80 2nzi_A Titin; IG-domain, FNIII 100.0 1.1E-27 3.8E-32 245.4 28.3 272 10-317 2-283 (305)
81 2oz4_A Intercellular adhesion 100.0 2.6E-28 9E-33 244.1 20.5 246 11-324 5-264 (265)
82 3vh8_G Killer cell immunoglobu 100.0 2.1E-28 7E-33 251.9 20.0 259 9-313 21-297 (316)
83 1zvo_C Myeloma immunoglobulin 100.0 8.9E-27 3E-31 255.4 34.1 356 242-650 7-502 (512)
84 2wng_A Tyrosine-protein phosph 100.0 5.2E-28 1.8E-32 250.3 21.3 263 328-643 5-311 (327)
85 4dep_C Interleukin-1 receptor 100.0 2E-28 6.9E-33 256.1 18.1 264 333-651 14-333 (349)
86 4dkd_C Macrophage colony-stimu 100.0 3E-28 1E-32 247.9 18.1 266 326-651 4-281 (292)
87 3mjg_X Beta-type platelet-deri 100.0 1.3E-27 4.4E-32 242.8 22.7 254 333-651 7-278 (289)
88 4fom_A Poliovirus receptor-rel 100.0 7.2E-29 2.5E-33 254.6 10.3 259 334-650 7-299 (308)
89 2oz4_A Intercellular adhesion 100.0 3.3E-27 1.1E-31 236.1 21.8 234 335-650 12-263 (265)
90 3o4o_C Interleukin-1 receptor 100.0 1.6E-28 5.4E-33 255.8 12.7 270 414-774 17-324 (339)
91 3vh8_G Killer cell immunoglobu 99.9 1.8E-27 6.3E-32 244.8 17.8 273 96-405 7-296 (316)
92 2jll_A NCAM2, neural cell adhe 99.9 2E-24 6.9E-29 229.5 40.7 349 113-504 1-383 (389)
93 2nzi_A Titin; IG-domain, FNIII 99.9 2E-25 7E-30 228.5 30.2 266 326-645 4-284 (305)
94 2wqr_A IG epsilon chain C regi 99.9 5.8E-27 2E-31 241.7 16.2 276 9-313 4-309 (323)
95 2a38_A Titin; Z1Z2, structural 99.9 9.9E-26 3.4E-30 213.8 21.9 187 414-650 4-194 (194)
96 3u83_A Poliovirus receptor-rel 99.9 1.6E-25 5.5E-30 232.3 24.8 261 113-411 14-314 (331)
97 2a38_A Titin; Z1Z2, structural 99.9 5.2E-25 1.8E-29 208.8 23.6 188 9-201 2-194 (194)
98 1za6_B IGG heavy chain; immuno 99.9 1.1E-25 3.8E-30 234.2 19.6 287 16-313 4-330 (344)
99 2yd1_A Tyrosine-protein phosph 99.9 9E-25 3.1E-29 210.3 23.1 189 10-203 4-201 (212)
100 3rbs_A Myomesin-1; immunoglobu 99.9 5.7E-25 1.9E-29 209.4 21.2 198 416-650 4-206 (207)
101 2yd6_A PTPRD protein; hydrolas 99.9 2.3E-24 7.9E-29 207.4 25.5 191 9-202 3-204 (212)
102 2j8h_A Titin, connectin; cardi 99.9 1.4E-24 4.9E-29 206.3 22.2 189 414-650 3-196 (197)
103 3lcy_A Titin; A-BAND, IG tande 99.9 1.8E-24 6.2E-29 205.7 22.5 189 413-650 5-195 (197)
104 2wv3_A Neuroplastin; igcam, me 99.9 7.5E-24 2.6E-28 199.9 25.6 177 415-650 3-189 (190)
105 3rbs_A Myomesin-1; immunoglobu 99.9 1.2E-24 4.1E-29 207.1 19.5 186 10-201 1-206 (207)
106 2j8h_A Titin, connectin; cardi 99.9 3.9E-24 1.3E-28 203.3 23.0 185 10-201 2-196 (197)
107 1za6_B IGG heavy chain; immuno 99.9 1.1E-25 3.7E-30 234.3 13.3 283 422-772 7-328 (344)
108 3lcy_A Titin; A-BAND, IG tande 99.9 5.8E-24 2E-28 202.2 24.2 187 8-202 3-196 (197)
109 2yd6_A PTPRD protein; hydrolas 99.9 1.1E-23 3.6E-28 202.7 25.1 192 414-651 5-204 (212)
110 2yd1_A Tyrosine-protein phosph 99.9 1E-23 3.4E-28 202.9 24.6 189 414-651 5-200 (212)
111 2c5d_C AXL oncogene, tyrosine- 99.9 1E-23 3.5E-28 200.0 24.3 181 12-200 2-191 (195)
112 4fa8_A Secreted protein BARF1; 99.9 8E-25 2.7E-29 206.9 15.6 167 424-643 2-194 (203)
113 1rhf_A Tyrosine-protein kinase 99.9 1.8E-23 6.3E-28 195.8 22.4 177 12-200 2-181 (182)
114 2wv3_A Neuroplastin; igcam, me 99.9 6.2E-23 2.1E-27 193.6 26.0 176 11-201 2-189 (190)
115 2wqr_A IG epsilon chain C regi 99.9 1.1E-24 3.7E-29 224.7 14.7 250 342-640 25-309 (323)
116 2iep_A Muscle-specific kinase 99.9 4.1E-24 1.4E-28 202.2 17.1 183 10-202 5-190 (192)
117 2v44_A NCAM2, neural cell adhe 99.9 2.1E-23 7.1E-28 196.8 21.4 176 419-650 6-186 (189)
118 2r15_A Myomesin-1; sarcomeric 99.9 3.1E-23 1.1E-27 199.7 22.0 187 429-651 16-210 (212)
119 2va4_A NCAM2, N-CAM 2, neural 99.9 8.4E-23 2.9E-27 193.2 24.1 179 12-201 2-192 (192)
120 2c5d_C AXL oncogene, tyrosine- 99.9 4.3E-23 1.5E-27 195.7 21.7 175 415-649 2-191 (195)
121 1rhf_A Tyrosine-protein kinase 99.9 7.9E-23 2.7E-27 191.5 21.6 174 415-650 2-182 (182)
122 2va4_A NCAM2, N-CAM 2, neural 99.9 1E-22 3.4E-27 192.7 22.1 180 415-650 2-192 (192)
123 1epf_A NCAM, protein (neural c 99.9 7.5E-23 2.6E-27 193.3 20.8 182 11-200 1-189 (191)
124 2v44_A NCAM2, neural cell adhe 99.9 8.6E-23 2.9E-27 192.5 20.3 177 14-200 4-185 (189)
125 1epf_A NCAM, protein (neural c 99.9 1.1E-22 3.8E-27 192.1 21.0 182 415-650 2-190 (191)
126 2v9r_A Roundabout homolog 1; p 99.9 7.9E-24 2.7E-28 203.9 13.3 188 8-202 5-202 (212)
127 2iep_A Muscle-specific kinase 99.9 3.1E-23 1E-27 196.2 17.1 178 415-650 7-189 (192)
128 2v5t_A NCAM2, N-CAM 2, neural 99.9 2.5E-23 8.6E-28 196.2 16.1 180 11-201 1-187 (189)
129 2vr9_A Roundabout 1, ROBO; imm 99.9 1.9E-23 6.4E-28 202.0 15.1 188 8-201 5-205 (217)
130 4fa8_A Secreted protein BARF1; 99.9 3.1E-23 1.1E-27 196.0 13.4 167 20-194 1-194 (203)
131 2v5t_A NCAM2, N-CAM 2, neural 99.9 2.1E-22 7E-27 189.9 18.3 179 415-651 2-188 (189)
132 3k0w_A Mucosa-associated lymph 99.9 3.4E-22 1.2E-26 193.0 19.1 176 8-202 14-202 (218)
133 3grw_A Fibroblast growth facto 99.9 5.2E-22 1.8E-26 195.4 20.6 191 8-204 7-220 (241)
134 3ojm_B Fibroblast growth facto 99.9 4.3E-22 1.5E-26 194.5 19.4 191 8-204 11-223 (231)
135 2v9r_A Roundabout homolog 1; p 99.9 1.7E-22 5.8E-27 194.5 14.6 187 409-650 3-201 (212)
136 2c1o_A IGK-C protein; FAB frag 99.9 1.8E-22 6.1E-27 200.3 14.9 204 388-641 11-245 (254)
137 1f97_A Junction adhesion molec 99.9 2.8E-22 9.7E-27 192.9 15.5 179 12-202 1-207 (212)
138 2vr9_A Roundabout 1, ROBO; imm 99.9 1.4E-22 4.6E-27 195.9 13.0 185 411-650 5-205 (217)
139 1f97_A Junction adhesion molec 99.9 4.1E-22 1.4E-26 191.8 16.0 179 416-651 2-205 (212)
140 3k0w_A Mucosa-associated lymph 99.9 1.7E-21 5.8E-26 188.0 19.9 180 415-650 18-201 (218)
141 2r15_A Myomesin-1; sarcomeric 99.9 1.4E-21 4.9E-26 188.0 19.3 173 25-201 15-209 (212)
142 3grw_A Fibroblast growth facto 99.9 8.8E-22 3E-26 193.7 17.4 189 414-651 10-218 (241)
143 3sgj_C Human FCG3A receptor; r 99.9 1E-21 3.5E-26 186.8 16.1 168 11-204 6-176 (204)
144 3b5h_A Cervical EMMPRIN, HAB18 99.9 8.9E-21 3E-25 177.7 21.7 164 425-650 8-182 (184)
145 1fnl_A Low affinity immunoglob 99.9 1.7E-21 5.9E-26 180.7 16.4 166 10-201 5-173 (175)
146 3s97_C Contactin-1; carbonic a 99.9 1.4E-21 4.8E-26 186.3 16.1 186 415-650 8-200 (201)
147 3s97_C Contactin-1; carbonic a 99.9 1.8E-21 6.2E-26 185.5 16.6 183 12-201 8-200 (201)
148 2c1o_A IGK-C protein; FAB frag 99.9 4.6E-22 1.6E-26 197.3 12.5 181 559-779 39-253 (254)
149 2x1w_L Vascular endothelial gr 99.9 1.7E-21 5.8E-26 187.2 16.0 175 422-650 14-206 (213)
150 2d3v_A Leukocyte immunoglobuli 99.9 4.8E-22 1.7E-26 188.3 11.6 171 11-191 4-181 (196)
151 2x1w_L Vascular endothelial gr 99.9 3E-21 1E-25 185.5 17.1 177 17-203 12-208 (213)
152 3p2t_A Leukocyte immunoglobuli 99.9 7.2E-22 2.5E-26 187.2 12.5 170 11-190 4-179 (196)
153 3bp6_B Programmed cell death 1 99.9 5.7E-21 1.9E-25 182.1 18.8 182 15-202 5-193 (202)
154 1vca_A VCAM-D1,2, human vascul 99.9 9.2E-21 3.1E-25 179.8 19.5 176 15-202 3-197 (202)
155 3ojm_B Fibroblast growth facto 99.9 2.1E-21 7.3E-26 189.6 15.3 179 423-650 27-220 (231)
156 1f2q_A High affinity immunoglo 99.9 1.1E-21 3.6E-26 182.4 12.5 167 11-203 3-172 (176)
157 3bp6_B Programmed cell death 1 99.9 4E-21 1.4E-25 183.2 16.3 175 420-650 7-192 (202)
158 2ifg_A High affinity nerve gro 99.9 2.2E-22 7.6E-27 209.4 7.8 199 392-650 136-344 (347)
159 1mq8_A ICAM-1, intercellular a 99.9 2.9E-21 1E-25 191.2 15.3 262 16-326 3-284 (291)
160 3sgj_C Human FCG3A receptor; r 99.9 7.1E-21 2.4E-25 180.9 16.5 162 416-650 8-173 (204)
161 1uct_A Immunoglobulin alpha FC 99.9 2.1E-21 7.3E-26 186.4 13.0 184 10-203 7-199 (218)
162 3mj8_L Stimulatory hamster ant 99.9 4.7E-21 1.6E-25 184.5 15.4 179 13-196 2-207 (213)
163 2fbo_J V1V2;, variable region- 99.9 4.6E-21 1.6E-25 189.7 15.7 180 15-200 5-250 (250)
164 1vca_A VCAM-D1,2, human vascul 99.9 4.4E-20 1.5E-24 175.1 21.4 172 122-326 10-199 (202)
165 3jz7_A MCAR, CAR, coxsackievir 99.8 8E-21 2.8E-25 183.0 15.6 181 15-201 3-211 (214)
166 1ugn_A LIR1, leukocyte immunog 99.8 2.3E-21 8E-26 184.0 11.4 170 11-190 4-181 (198)
167 1nbq_A JAM, junctional adhesio 99.8 6.1E-22 2.1E-26 190.1 7.1 173 11-195 3-200 (209)
168 1nbq_A JAM, junctional adhesio 99.8 7.7E-22 2.6E-26 189.4 7.7 179 415-650 4-206 (209)
169 1oll_A NK receptor; immune sys 99.8 1.3E-20 4.4E-25 177.0 15.7 168 11-189 3-172 (188)
170 2ifg_A High affinity nerve gro 99.8 2.5E-21 8.5E-26 201.4 11.8 180 9-202 155-345 (347)
171 3jz7_A MCAR, CAR, coxsackievir 99.8 3.2E-21 1.1E-25 185.8 11.8 174 420-650 5-211 (214)
172 1fnl_A Low affinity immunoglob 99.8 2.2E-20 7.6E-25 173.2 16.9 163 415-650 7-173 (175)
173 3b5h_A Cervical EMMPRIN, HAB18 99.8 8.5E-20 2.9E-24 171.0 20.8 163 21-201 7-182 (184)
174 3p2t_A Leukocyte immunoglobuli 99.8 2.3E-20 7.8E-25 176.8 16.8 168 112-312 4-179 (196)
175 1ugn_A LIR1, leukocyte immunog 99.8 3.8E-20 1.3E-24 175.6 18.1 172 415-640 5-182 (198)
176 3ry4_A Low affinity immunoglob 99.8 2E-20 7E-25 172.7 15.8 164 11-200 3-169 (170)
177 2gi7_A GPVI protein; IG-like d 99.8 3.7E-21 1.3E-25 180.0 10.5 161 10-190 6-168 (184)
178 3r4d_A CEA-related cell adhesi 99.8 4.6E-20 1.6E-24 176.7 18.4 176 15-201 2-199 (208)
179 1hng_A CD2; T lymphocyte adhes 99.8 6.5E-21 2.2E-25 176.4 11.6 153 425-649 6-174 (176)
180 1uct_A Immunoglobulin alpha FC 99.8 9.4E-21 3.2E-25 181.9 13.0 167 415-638 9-180 (218)
181 1f2q_A High affinity immunoglo 99.8 2.8E-20 9.6E-25 172.7 15.6 164 414-650 3-170 (176)
182 2d3v_A Leukocyte immunoglobuli 99.8 8.1E-21 2.8E-25 179.8 11.5 178 558-780 5-187 (196)
183 1oll_A NK receptor; immune sys 99.8 4.6E-20 1.6E-24 173.1 16.3 166 415-638 4-172 (188)
184 4f80_A Butyrophilin subfamily 99.8 1.1E-19 3.6E-24 176.6 19.3 178 18-202 10-213 (226)
185 4f80_A Butyrophilin subfamily 99.8 1.3E-19 4.5E-24 175.9 19.4 175 421-650 10-212 (226)
186 3mj8_L Stimulatory hamster ant 99.8 4.7E-20 1.6E-24 177.4 15.8 180 417-646 3-208 (213)
187 3nl4_L Antigen binding fragmen 99.8 6.4E-20 2.2E-24 176.5 16.4 169 13-186 2-198 (213)
188 4frw_A Poliovirus receptor-rel 99.8 1E-19 3.4E-24 175.8 17.1 181 17-201 4-210 (218)
189 2fbo_J V1V2;, variable region- 99.8 1.8E-20 6E-25 185.5 11.8 179 420-648 7-249 (250)
190 1hng_A CD2; T lymphocyte adhes 99.8 3.1E-20 1.1E-24 171.8 12.4 156 21-200 5-174 (176)
191 3d9a_L Light chain of hyhel10 99.8 1.5E-19 5E-24 173.9 17.5 174 14-192 3-203 (213)
192 1b6u_A KIR2DL3, P58 killer cel 99.8 9.1E-20 3.1E-24 178.9 16.1 220 11-273 6-240 (257)
193 3sbw_C Programmed cell death 1 99.8 1.9E-19 6.4E-24 174.5 18.0 178 420-650 6-210 (222)
194 1q0x_L FAB 9B1, light chain; a 99.8 3E-19 1E-23 171.5 19.3 176 14-194 3-207 (212)
195 3ry4_A Low affinity immunoglob 99.8 1.3E-19 4.5E-24 167.2 15.9 161 416-649 5-169 (170)
196 3tv3_L PGT128 light chain, IG 99.8 1E-19 3.5E-24 174.7 15.3 177 13-196 2-205 (211)
197 3s96_B 3B5H10 FAB light chain; 99.8 1.9E-19 6.4E-24 173.9 16.8 178 13-195 2-213 (218)
198 3mj6_A Junctional adhesion mol 99.8 7.5E-20 2.6E-24 183.1 14.5 182 11-203 4-238 (268)
199 2ny1_B T-cell surface glycopro 99.8 5.1E-20 1.8E-24 172.4 12.2 165 20-204 3-181 (184)
200 1lk3_L 9D7 light chain; antige 99.8 2.2E-19 7.5E-24 172.2 16.4 171 14-190 3-200 (210)
201 3d9a_L Light chain of hyhel10 99.8 1.2E-19 4.1E-24 174.6 14.6 174 420-643 6-205 (213)
202 1jbj_A CD3 epsilon and gamma e 99.8 4.1E-20 1.4E-24 172.9 11.0 152 19-192 6-179 (186)
203 2gi7_A GPVI protein; IG-like d 99.8 4.6E-20 1.6E-24 172.5 11.3 162 110-312 5-168 (184)
204 2ny1_B T-cell surface glycopro 99.8 4.5E-20 1.5E-24 172.9 11.0 157 424-650 4-178 (184)
205 3nl4_L Antigen binding fragmen 99.8 6.2E-20 2.1E-24 176.5 12.3 173 559-772 2-200 (213)
206 1jbj_A CD3 epsilon and gamma e 99.8 2E-20 6.8E-25 175.1 8.6 165 426-641 10-179 (186)
207 4frw_A Poliovirus receptor-rel 99.8 8.5E-20 2.9E-24 176.3 13.2 180 421-652 5-212 (218)
208 1p6f_A NKP46, natural cytotoxi 99.8 2.8E-19 9.5E-24 174.2 16.7 183 10-203 5-192 (242)
209 3sbw_C Programmed cell death 1 99.8 5.5E-19 1.9E-23 171.1 17.8 181 16-202 5-211 (222)
210 2ghw_B Anti-SARS SCFV antibody 99.8 8.9E-19 3.1E-23 172.7 19.5 185 14-201 5-241 (247)
211 3tv3_L PGT128 light chain, IG 99.8 1.5E-19 5E-24 173.6 13.4 177 418-645 4-205 (211)
212 1nkr_A P58-CL42 KIR; inhibitor 99.8 3.8E-19 1.3E-23 169.0 16.0 169 11-189 7-184 (201)
213 1nqb_A Single-chain antibody f 99.8 1.1E-18 3.7E-23 172.6 19.8 182 16-203 4-234 (256)
214 3r4d_A CEA-related cell adhesi 99.8 6E-19 2E-23 169.0 17.3 171 122-324 8-200 (208)
215 2pet_A Lutheran blood group gl 99.8 1.7E-19 5.7E-24 176.0 13.5 179 16-200 4-229 (231)
216 1lk3_L 9D7 light chain; antige 99.8 3.9E-19 1.3E-23 170.4 15.5 171 422-642 7-203 (210)
217 1p6f_A NKP46, natural cytotoxi 99.8 6.7E-19 2.3E-23 171.5 17.1 166 415-638 7-175 (242)
218 3r06_A Anti-mouse CD3epsilon a 99.8 8.2E-19 2.8E-23 168.7 17.4 175 12-191 1-202 (213)
219 1f3r_B FV antibody fragment; I 99.8 5.9E-19 2E-23 174.9 16.3 184 17-202 5-245 (257)
220 2if7_A SLAM family member 6; N 99.8 1.7E-18 5.7E-23 163.0 18.4 163 15-195 1-185 (193)
221 1b6u_A KIR2DL3, P58 killer cel 99.8 6.4E-19 2.2E-23 172.9 15.9 217 112-363 6-240 (257)
222 1c1e_H Catalytic antibody 1E9 99.8 5.6E-19 1.9E-23 170.6 15.1 179 17-198 5-216 (219)
223 3juy_B 3B3 single chain varian 99.8 2.4E-18 8.1E-23 170.6 20.0 179 10-190 4-244 (256)
224 3sob_L Antibody light chain; b 99.8 9.2E-19 3.2E-23 171.5 16.7 176 11-191 23-225 (237)
225 2pet_A Lutheran blood group gl 99.8 1.9E-19 6.4E-24 175.7 11.7 164 421-637 6-211 (231)
226 3knb_B Obscurin-like protein 1 99.8 4.6E-19 1.6E-23 147.6 11.6 96 554-650 9-104 (107)
227 2ghw_B Anti-SARS SCFV antibody 99.8 4.5E-18 1.6E-22 167.6 20.7 190 423-650 10-241 (247)
228 1q0x_L FAB 9B1, light chain; a 99.8 1.1E-18 3.9E-23 167.5 15.8 174 422-644 7-208 (212)
229 1mq8_A ICAM-1, intercellular a 99.8 6.3E-19 2.1E-23 174.5 14.2 241 120-404 6-269 (291)
230 1nqb_A Single-chain antibody f 99.8 6.5E-18 2.2E-22 167.0 21.6 176 422-650 7-232 (256)
231 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 2.7E-18 9.3E-23 170.0 18.8 188 12-202 3-248 (256)
232 3uzq_A Anti-dengue MAB 4E11; d 99.8 1.8E-18 6.2E-23 171.0 17.4 188 14-203 3-245 (253)
233 2zg1_A Sialic acid-binding IG- 99.8 1.5E-18 5E-23 167.1 16.2 175 16-199 4-210 (214)
234 3s96_B 3B5H10 FAB light chain; 99.8 1.6E-18 5.6E-23 167.2 16.4 178 418-645 4-214 (218)
235 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 9.7E-19 3.3E-23 169.3 14.6 178 17-197 5-218 (222)
236 2p1y_A Bispecific alpha/beta T 99.8 2.8E-18 9.6E-23 168.1 18.0 172 14-189 2-222 (238)
237 1f3r_B FV antibody fragment; I 99.8 1.5E-18 5.2E-23 171.9 16.2 178 423-638 8-232 (257)
238 2if7_A SLAM family member 6; N 99.8 2E-18 6.9E-23 162.4 16.2 159 421-644 4-185 (193)
239 1sy6_A T-cell surface glycopro 99.8 1.5E-19 5.3E-24 171.5 8.4 174 428-640 16-192 (204)
240 1nfd_E H57 FAB; complex (immun 99.8 1.4E-19 4.9E-24 173.8 8.3 173 422-643 6-204 (212)
241 1c1e_H Catalytic antibody 1E9 99.8 2.2E-18 7.6E-23 166.4 16.3 176 422-647 7-216 (219)
242 1nfd_E H57 FAB; complex (immun 99.8 1.1E-19 3.6E-24 174.7 6.9 172 15-191 3-201 (212)
243 2xzc_L FAB A.17 light chain; i 99.8 1.4E-18 4.8E-23 167.4 14.7 171 15-191 4-204 (216)
244 3umt_A SCFV heavy chain and li 99.8 6.5E-18 2.2E-22 167.4 19.7 185 18-204 8-247 (256)
245 3gkz_A Anti-methamphetamine si 99.8 1.3E-17 4.4E-22 165.4 21.7 191 11-203 7-250 (257)
246 3juy_B 3B3 single chain varian 99.8 7.9E-18 2.7E-22 166.7 20.1 189 414-640 5-245 (256)
247 1qok_A MFE-23 recombinant anti 99.8 5.3E-18 1.8E-22 170.4 19.0 185 15-202 29-268 (282)
248 2j6e_L IGM, FAB light chain; a 99.8 6.3E-19 2.2E-23 172.3 11.5 177 12-193 20-226 (234)
249 3sob_L Antibody light chain; b 99.8 3.8E-18 1.3E-22 167.1 17.1 180 417-646 26-231 (237)
250 3r06_A Anti-mouse CD3epsilon a 99.8 2.1E-18 7.2E-23 165.8 14.8 176 417-642 3-204 (213)
251 1nkr_A P58-CL42 KIR; inhibitor 99.8 7.5E-18 2.6E-22 160.0 18.3 165 111-310 6-183 (201)
252 3d9a_H Heavy chain of hyhel10 99.8 2E-18 6.9E-23 165.4 14.2 174 17-194 5-206 (210)
253 1moe_A Anti-CEA MAB T84.66; an 99.8 4.8E-18 1.6E-22 166.7 17.2 171 13-187 2-219 (240)
254 1dr9_A B7-1 (CD80), T lymphocy 99.8 4.9E-18 1.7E-22 161.5 16.7 169 424-647 3-197 (201)
255 2vol_A Murine IGG FC; FC, zinc 99.8 1E-18 3.5E-23 166.7 12.0 179 12-190 2-196 (207)
256 3pv7_A B7-H6, IG-like domain-c 99.8 1.7E-18 5.9E-23 170.8 13.9 180 16-200 7-224 (248)
257 4i0k_A CD276 antigen; immunogl 99.8 3.9E-19 1.3E-23 172.2 9.2 176 424-650 4-205 (222)
258 2v5y_A Receptor-type tyrosine- 99.8 7.3E-16 2.5E-20 177.1 37.9 424 26-504 90-560 (731)
259 3auv_A SC-DSFV derived from th 99.8 6.1E-18 2.1E-22 169.5 17.9 188 11-202 11-254 (276)
260 3uzq_A Anti-dengue MAB 4E11; d 99.8 7.9E-18 2.7E-22 166.4 18.5 193 420-650 6-243 (253)
261 2xzc_L FAB A.17 light chain; i 99.8 2.5E-18 8.4E-23 165.7 14.3 172 422-643 7-207 (216)
262 4dzb_B Vbeta2 (MAIT T cell rec 99.8 3.8E-18 1.3E-22 168.0 15.7 175 13-190 2-219 (246)
263 3bkj_L WO2 IGG2A FAB fragment 99.8 2.5E-18 8.7E-23 169.9 14.4 176 11-191 33-240 (252)
264 4i0k_A CD276 antigen; immunogl 99.8 9.1E-19 3.1E-23 169.6 10.9 181 20-204 3-208 (222)
265 3knb_A Titin; IG-like, titin, 99.8 2.6E-18 8.8E-23 141.3 11.9 95 555-650 2-98 (100)
266 3esu_F Antibody 14B7* light ch 99.8 1.2E-17 4.2E-22 164.8 18.9 172 12-187 4-231 (250)
267 2p1y_A Bispecific alpha/beta T 99.8 3.9E-18 1.3E-22 167.1 15.1 179 419-638 4-222 (238)
268 3mj6_A Junctional adhesion mol 99.8 1.6E-18 5.4E-23 173.4 12.5 194 114-344 6-257 (268)
269 3esu_F Antibody 14B7* light ch 99.8 1.3E-17 4.3E-22 164.8 18.6 186 417-636 6-231 (250)
270 1moe_A Anti-CEA MAB T84.66; an 99.8 1.5E-17 5E-22 163.2 19.0 172 418-636 4-219 (240)
271 1dee_B IGM RF 2A2; FAB-IBP com 99.8 3.1E-17 1.1E-21 158.5 20.9 177 18-196 6-221 (223)
272 1pz5_B Heavy chain of FAB (SYA 99.8 9.1E-18 3.1E-22 162.1 17.1 177 17-196 5-215 (220)
273 1mju_H Immunoglobulin MS6-12; 99.8 5.7E-18 1.9E-22 164.1 15.3 182 17-201 5-216 (227)
274 1qok_A MFE-23 recombinant anti 99.8 2.5E-17 8.6E-22 165.5 20.6 190 422-650 33-267 (282)
275 1gsm_A Madcam-1, mucosal addre 99.8 2.8E-17 9.5E-22 153.0 19.1 153 22-190 17-193 (210)
276 3auv_A SC-DSFV derived from th 99.8 2E-17 6.8E-22 165.7 19.5 184 416-638 13-236 (276)
277 2zg1_A Sialic acid-binding IG- 99.8 4.6E-18 1.6E-22 163.5 14.3 171 421-650 6-212 (214)
278 2fbj_H IGA-kappa J539 FAB (hea 99.8 1.7E-17 5.8E-22 160.0 18.3 174 17-193 5-212 (220)
279 2rgs_A I, IG gamma-2B heavy ch 99.8 1.4E-18 4.8E-23 167.2 10.3 180 11-190 8-204 (218)
280 2w59_A IGY FCU3-4; immunoglobu 99.8 1.6E-18 5.6E-23 168.2 10.8 176 12-190 12-216 (231)
281 2znx_A SCFV; fluorotryptohpan, 99.8 1.6E-17 5.6E-22 162.8 18.0 180 418-637 4-222 (242)
282 3umt_A SCFV heavy chain and li 99.8 4.1E-17 1.4E-21 161.6 20.9 191 423-650 10-244 (256)
283 3d9a_H Heavy chain of hyhel10 99.8 8.5E-18 2.9E-22 161.0 15.3 173 422-644 7-207 (210)
284 3qib_D 2B4 beta chain; IG doma 99.8 6.5E-19 2.2E-23 176.2 7.6 177 566-779 35-251 (270)
285 3bkj_L WO2 IGG2A FAB fragment 99.8 5.5E-18 1.9E-22 167.5 14.2 175 417-641 36-241 (252)
286 2znx_A SCFV; fluorotryptohpan, 99.8 1.3E-17 4.5E-22 163.5 16.8 172 13-188 2-222 (242)
287 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 1.6E-17 5.4E-22 160.7 16.6 174 423-647 8-219 (222)
288 4dzb_B Vbeta2 (MAIT T cell rec 99.7 2.8E-18 9.6E-23 169.0 11.4 177 560-772 3-218 (246)
289 1dr9_A B7-1 (CD80), T lymphocy 99.7 5.6E-18 1.9E-22 161.1 12.5 168 21-198 3-197 (201)
290 1svz_A Immunoglobulin;, single 99.7 2.1E-17 7.3E-22 162.7 16.9 172 13-188 2-228 (247)
291 1svz_A Immunoglobulin;, single 99.7 4.6E-17 1.6E-21 160.3 19.1 179 419-637 5-228 (247)
292 1hnf_A CD2; T lymphocyte adhes 99.7 7.6E-18 2.6E-22 155.6 12.6 157 19-199 6-178 (182)
293 3bae_H WO2 IGG2A FAB fragment 99.7 1.5E-17 5E-22 161.4 15.0 175 18-195 6-219 (228)
294 1op3_H FAB 2G12, heavy chain; 99.7 1.6E-17 5.4E-22 160.8 15.0 172 18-192 6-215 (225)
295 1sy6_A T-cell surface glycopro 99.7 1.2E-18 4E-23 165.4 6.8 155 24-200 15-202 (204)
296 1dn0_B IGM-kappa cold agglutin 99.7 6.8E-17 2.3E-21 157.0 19.4 183 17-201 5-226 (232)
297 2v5y_A Receptor-type tyrosine- 99.7 2.3E-15 8E-20 172.9 35.5 334 128-505 91-457 (731)
298 3bqu_C 3H6 FAB light chain; be 99.7 8.3E-19 2.8E-23 171.3 5.8 173 12-189 23-222 (233)
299 3gkz_A Anti-methamphetamine si 99.7 6.2E-17 2.1E-21 160.4 19.4 191 421-650 14-248 (257)
300 1hnf_A CD2; T lymphocyte adhes 99.7 1.1E-17 3.9E-22 154.4 12.8 153 423-647 7-177 (182)
301 3pv7_A B7-H6, IG-like domain-c 99.7 2.9E-17 9.8E-22 162.0 16.5 177 421-651 9-224 (248)
302 4fmk_A Poliovirus receptor-rel 99.7 1.7E-17 5.7E-22 161.0 14.4 180 18-201 7-218 (225)
303 3qib_D 2B4 beta chain; IG doma 99.7 6.7E-18 2.3E-22 168.8 11.9 203 389-641 4-245 (270)
304 2j6e_L IGM, FAB light chain; a 99.7 3.3E-18 1.1E-22 167.2 9.1 175 422-645 26-229 (234)
305 1ccz_A Protein (CD58); LFA-3, 99.7 1.4E-17 4.9E-22 152.7 12.8 154 20-199 3-168 (171)
306 3ux9_B SCFV antibody; five hel 99.7 5.7E-17 1.9E-21 160.7 17.9 168 17-189 7-236 (256)
307 2gjj_A A21 single-chain antibo 99.7 6.6E-17 2.3E-21 160.5 18.1 174 11-188 4-239 (264)
308 1ccz_A Protein (CD58); LFA-3, 99.7 9.8E-18 3.4E-22 153.8 11.0 153 424-648 4-168 (171)
309 3mtr_A N-CAM-1, NCAM-1, neural 99.7 5.3E-17 1.8E-21 156.1 16.3 182 9-201 16-208 (215)
310 2dru_A Chimera of CD48 antigen 99.7 2.9E-17 1E-21 152.1 13.9 154 19-197 6-176 (180)
311 2gki_A Nuclease; anti-DNA anti 99.7 7.8E-17 2.7E-21 162.5 17.7 185 16-202 26-272 (291)
312 2dru_A Chimera of CD48 antigen 99.7 2.7E-17 9.2E-22 152.3 13.0 153 423-647 7-177 (180)
313 3omz_A Human vdelta1 gamma del 99.7 2E-17 7E-22 164.1 13.0 190 12-203 2-251 (259)
314 3ux9_B SCFV antibody; five hel 99.7 2.4E-16 8.2E-21 156.1 20.6 183 423-638 10-236 (256)
315 3knb_B Obscurin-like protein 1 99.7 3.6E-17 1.2E-21 136.1 12.2 97 7-107 8-104 (107)
316 4ei6_B Vbeta16 XV19 type II na 99.7 8.7E-17 3E-21 158.2 17.1 174 12-189 2-217 (245)
317 4fmk_A Poliovirus receptor-rel 99.7 1.4E-17 4.8E-22 161.5 11.2 174 423-650 9-216 (225)
318 1i1c_A IGG2A, IG gamma-2A chai 99.7 1.1E-17 3.8E-22 162.8 10.3 180 11-190 15-210 (239)
319 3nfj_J T cell receptor beta ch 99.7 9.6E-17 3.3E-21 157.8 16.8 174 14-190 3-218 (245)
320 3pl6_D MBP peptide / T-cell re 99.7 6.3E-17 2.2E-21 161.5 15.6 176 11-190 25-240 (268)
321 2rgs_A I, IG gamma-2B heavy ch 99.7 4.8E-18 1.6E-22 163.5 7.1 176 558-772 9-203 (218)
322 1l6x_A Immunoglobulin gamma-1 99.7 1.6E-17 5.6E-22 158.4 10.7 179 12-190 2-196 (207)
323 3bqu_C 3H6 FAB light chain; be 99.7 1.1E-18 3.8E-23 170.4 2.5 175 559-773 24-223 (233)
324 3q5y_A TCR N15 beta; IG, T cel 99.7 1.4E-16 4.7E-21 156.1 17.5 174 13-190 3-212 (240)
325 2gjj_A A21 single-chain antibo 99.7 2.5E-16 8.5E-21 156.3 19.4 188 416-637 6-239 (264)
326 3shs_A HOC head outer capsid p 99.7 6.4E-16 2.2E-20 143.4 20.5 239 12-309 2-279 (304)
327 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.6E-16 5.5E-21 157.2 17.9 197 115-324 5-248 (256)
328 2fbj_H IGA-kappa J539 FAB (hea 99.7 1.8E-16 6E-21 152.8 17.7 170 423-642 8-212 (220)
329 3nl4_H Antigen binding fragmen 99.7 4.3E-17 1.5E-21 156.7 13.3 179 16-199 3-211 (215)
330 1pz5_B Heavy chain of FAB (SYA 99.7 1E-16 3.5E-21 154.7 15.8 175 422-646 7-216 (220)
331 3eow_R Poliovirus receptor; im 99.7 7.7E-18 2.6E-22 162.8 7.9 179 18-201 5-211 (221)
332 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 1.8E-16 6.1E-21 158.0 17.8 176 9-188 12-254 (268)
333 2xqy_G A13-D6.3 monoclonal ant 99.7 1.2E-16 4E-21 157.9 16.1 173 16-191 10-214 (261)
334 3m8o_H Immunoglobulin A1 heavy 99.7 1.2E-16 4.2E-21 154.3 15.8 171 17-191 5-212 (221)
335 1mju_H Immunoglobulin MS6-12; 99.7 1.5E-16 5E-21 154.1 16.3 177 422-648 7-214 (227)
336 3eow_R Poliovirus receptor; im 99.7 1.2E-17 3.9E-22 161.6 8.2 173 423-649 7-210 (221)
337 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 2.3E-16 7.8E-21 157.3 17.6 191 416-637 16-254 (268)
338 3liz_H 4C3 monoclonal antibody 99.7 1.6E-16 5.6E-21 156.7 16.0 182 17-201 5-219 (253)
339 3q5y_A TCR N15 beta; IG, T cel 99.7 2E-16 7E-21 154.9 16.6 178 417-641 4-214 (240)
340 1op3_H FAB 2G12, heavy chain; 99.7 1.4E-16 4.9E-21 154.1 15.1 170 423-642 8-216 (225)
341 1gsm_A Madcam-1, mucosal addre 99.7 1.9E-15 6.4E-20 140.7 22.0 157 122-315 16-196 (210)
342 2gki_A Nuclease; anti-DNA anti 99.7 3.2E-16 1.1E-20 158.0 18.3 191 423-650 30-271 (291)
343 2vol_A Murine IGG FC; FC, zinc 99.7 5.4E-18 1.8E-22 161.7 4.5 174 560-772 4-195 (207)
344 3mtr_A N-CAM-1, NCAM-1, neural 99.7 1.7E-16 5.7E-21 152.6 14.9 181 414-650 18-208 (215)
345 3bae_H WO2 IGG2A FAB fragment 99.7 2.9E-16 9.9E-21 152.3 16.3 174 423-646 8-221 (228)
346 3nfj_J T cell receptor beta ch 99.7 7.6E-17 2.6E-21 158.6 12.3 175 561-771 4-216 (245)
347 1c5d_H Monoclonal antibody aga 99.7 1.9E-16 6.4E-21 152.1 14.5 174 18-194 6-208 (215)
348 1hxm_B Gamma-delta T-cell rece 99.7 2.5E-16 8.5E-21 154.3 15.6 184 12-200 1-227 (242)
349 4ei6_B Vbeta16 XV19 type II na 99.7 7.8E-17 2.7E-21 158.5 11.8 177 559-772 3-217 (245)
350 3knb_A Titin; IG-like, titin, 99.7 2.1E-16 7.3E-21 129.7 12.4 94 10-107 3-98 (100)
351 3fku_X Neutralizing antibody F 99.7 3.5E-16 1.2E-20 156.8 16.5 186 13-202 2-250 (280)
352 3nl4_H Antigen binding fragmen 99.7 2.4E-16 8.2E-21 151.5 14.5 177 422-648 6-211 (215)
353 3bn9_D E2 FAB heavy chain; ant 99.7 1.2E-16 4.1E-21 157.0 12.6 174 17-193 5-221 (257)
354 3pl6_D MBP peptide / T-cell re 99.7 4.9E-17 1.7E-21 162.3 9.3 184 559-779 27-248 (268)
355 3fku_X Neutralizing antibody F 99.7 4.3E-16 1.5E-20 156.1 16.0 189 422-650 7-249 (280)
356 2wbj_D OB TCR; transmembrane, 99.7 4.5E-16 1.6E-20 156.1 15.7 177 11-190 23-244 (279)
357 1i1c_A IGG2A, IG gamma-2A chai 99.7 3E-17 1E-21 159.7 6.4 191 550-779 8-220 (239)
358 3shs_A HOC head outer capsid p 99.7 4.8E-15 1.6E-19 137.7 20.3 235 119-402 8-279 (304)
359 3omz_A Human vdelta1 gamma del 99.7 1.9E-16 6.4E-21 157.1 11.9 187 415-637 2-231 (259)
360 2w59_A IGY FCU3-4; immunoglobu 99.7 3E-17 1E-21 159.3 5.4 183 559-780 13-227 (231)
361 1c5d_H Monoclonal antibody aga 99.7 1.3E-15 4.3E-20 146.2 16.0 173 422-645 7-210 (215)
362 1hxm_B Gamma-delta T-cell rece 99.7 1.4E-15 4.9E-20 148.8 16.4 184 419-649 5-227 (242)
363 3qp3_A Titin; I-SET IG-like, s 99.7 9.6E-16 3.3E-20 127.5 12.9 94 556-650 6-99 (103)
364 4acp_A IG gamma-1 chain C regi 99.7 1.8E-16 6.3E-21 153.5 9.7 181 9-189 20-216 (240)
365 2cqv_A MLCK, myosin light chai 99.7 1.5E-15 5.3E-20 128.8 14.2 93 557-650 6-98 (114)
366 3m8o_H Immunoglobulin A1 heavy 99.6 3.2E-15 1.1E-19 144.3 17.2 170 423-642 8-214 (221)
367 1g1c_A Immunoglobulin-like dom 99.6 1.4E-15 4.6E-20 125.5 12.5 93 557-650 4-97 (99)
368 2wbj_D OB TCR; transmembrane, 99.6 2E-16 7E-21 158.6 8.7 179 558-772 24-243 (279)
369 2xqy_G A13-D6.3 monoclonal ant 99.6 3.3E-15 1.1E-19 147.4 17.1 172 422-643 13-217 (261)
370 3tv3_H PGT128 heavy chain, IG 99.6 1.7E-15 5.8E-20 147.8 14.6 181 17-200 5-235 (239)
371 3puc_A Titin; I-SET IG-like do 99.6 2E-15 7E-20 124.5 12.8 93 557-650 5-97 (99)
372 1dee_B IGM RF 2A2; FAB-IBP com 99.6 1.2E-14 4.1E-19 140.2 20.3 170 121-318 8-221 (223)
373 1wit_A Twitchin 18TH IGSF modu 99.6 8.5E-16 2.9E-20 124.9 10.3 90 558-650 2-93 (93)
374 3qhz_H Human monoclonal antibo 99.6 1.5E-15 5E-20 147.8 13.8 180 18-200 6-227 (232)
375 1dn0_B IGM-kappa cold agglutin 99.6 7.4E-15 2.5E-19 142.5 18.3 180 423-650 8-226 (232)
376 1ow0_A IG alpha-1 chain C regi 99.6 5.1E-17 1.7E-21 155.7 2.9 177 11-190 3-199 (214)
377 3to4_D NKT vbeta2 (mouse varia 99.6 1.3E-15 4.4E-20 150.4 12.9 170 15-189 4-217 (253)
378 3bn9_D E2 FAB heavy chain; ant 99.6 1.3E-15 4.3E-20 149.7 12.7 171 423-643 8-222 (257)
379 1l6x_A Immunoglobulin gamma-1 99.6 1.9E-16 6.4E-21 151.0 6.5 163 571-772 16-195 (207)
380 1bec_A 14.3.D T cell antigen r 99.6 3.4E-15 1.2E-19 145.8 15.4 171 15-189 2-210 (238)
381 2aty_A Complement receptor chi 99.6 2.4E-15 8.2E-20 157.4 15.0 178 13-190 168-361 (376)
382 3u2s_H PG9 heavy chain; greek 99.6 2.3E-15 7.9E-20 147.4 13.8 182 16-200 3-236 (248)
383 1bec_A 14.3.D T cell antigen r 99.6 1.6E-15 5.5E-20 148.1 12.3 181 562-779 3-219 (238)
384 1waa_A Titin; metal binding pr 99.6 2.9E-15 1E-19 120.8 11.6 88 557-650 4-91 (93)
385 3liz_H 4C3 monoclonal antibody 99.6 8.8E-15 3E-19 144.2 17.5 178 423-650 8-219 (253)
386 1oga_E TRBC1, T-cell receptor 99.6 6.6E-15 2.2E-19 145.1 15.8 174 13-190 4-217 (252)
387 2yuz_A Myosin-binding protein 99.6 2E-15 6.8E-20 123.9 10.0 90 556-650 5-94 (100)
388 3n9g_H FAB fragment of MAB CR4 99.6 9.5E-15 3.2E-19 141.7 16.3 179 18-201 6-224 (230)
389 4acp_A IG gamma-1 chain C regi 99.6 4.4E-16 1.5E-20 150.8 6.5 197 394-639 1-217 (240)
390 3irg_B Obscurin-like protein 1 99.6 4.2E-15 1.4E-19 124.6 11.6 94 556-650 11-104 (107)
391 1u2h_A APEG-1, aortic preferen 99.6 5.1E-15 1.7E-19 122.1 11.8 92 558-650 5-97 (99)
392 2kkq_A Myotilin; unknown funct 99.6 3.4E-15 1.2E-19 126.7 10.9 97 554-651 11-109 (116)
393 1ypz_F T-cell receptor gamma c 99.6 6.1E-15 2.1E-19 142.9 14.0 171 15-190 4-215 (230)
394 1iam_A ICAM-1, CD54, intercell 99.6 3.6E-14 1.2E-18 128.9 18.0 161 15-190 2-166 (185)
395 3to4_D NKT vbeta2 (mouse varia 99.6 1.9E-15 6.5E-20 149.1 10.3 171 564-771 7-216 (253)
396 2lu7_A Obscurin-like protein 1 99.6 2.1E-15 7.3E-20 118.5 8.5 80 565-650 3-82 (84)
397 3irg_A Titin; IG-like, titin, 99.6 5.7E-15 2E-19 122.1 11.4 94 556-650 3-98 (100)
398 1nct_A Titin; cell adhesion, g 99.6 1.8E-15 6.3E-20 126.0 8.2 94 556-650 12-105 (106)
399 2kdg_A Myotilin; immonoglobuli 99.6 4.6E-15 1.6E-19 122.6 10.4 92 558-650 5-97 (100)
400 2bk8_A Connectin, M1, titin he 99.6 1.4E-14 4.8E-19 118.8 12.9 90 560-650 3-93 (97)
401 3iu4_H CHP3 FAB heavy chain; a 99.6 6.9E-15 2.4E-19 145.3 12.4 177 18-199 6-221 (263)
402 2cqv_A MLCK, myosin light chai 99.6 2.6E-14 8.7E-19 121.2 14.2 95 10-108 5-99 (114)
403 2yr3_A Myosin light chain kina 99.6 7.1E-15 2.4E-19 121.1 9.7 90 557-650 10-99 (99)
404 2dm2_A Palladin; beta-sandwich 99.6 9.8E-15 3.3E-19 122.9 10.7 95 556-651 6-102 (110)
405 3qp3_A Titin; I-SET IG-like, s 99.6 2.7E-14 9.2E-19 118.6 13.0 97 7-107 3-99 (103)
406 2lvc_A Obscurin-like protein 1 99.6 5.6E-15 1.9E-19 118.2 8.4 86 558-649 4-91 (91)
407 1ypz_F T-cell receptor gamma c 99.6 1.7E-14 5.7E-19 139.8 13.2 177 420-642 6-218 (230)
408 3o3u_N Maltose-binding peripla 99.6 6.9E-15 2.3E-19 164.7 11.8 164 424-641 375-567 (581)
409 2e7c_A Myosin-binding protein 99.6 2.8E-14 9.4E-19 121.8 12.9 92 557-650 20-114 (118)
410 3o3u_N Maltose-binding peripla 99.6 1.1E-14 3.6E-19 163.1 13.2 162 19-190 373-565 (581)
411 1g1c_A Immunoglobulin-like dom 99.6 3.4E-14 1.1E-18 117.1 12.8 95 10-107 3-97 (99)
412 1oga_E TRBC1, T-cell receptor 99.6 9.2E-15 3.2E-19 144.0 11.1 176 560-772 5-216 (252)
413 2dav_A SLOW MYBP-C, myosin-bin 99.6 5.1E-15 1.8E-19 124.6 7.6 92 559-651 8-111 (126)
414 2dm3_A KIAA0992 protein, palla 99.6 9.3E-15 3.2E-19 123.1 9.3 95 556-651 7-102 (110)
415 1waa_A Titin; metal binding pr 99.6 3.7E-14 1.3E-18 114.3 12.2 90 414-506 4-93 (93)
416 2dav_A SLOW MYBP-C, myosin-bin 99.6 5.3E-14 1.8E-18 118.4 13.6 107 13-119 8-122 (126)
417 3sob_H Antibody heavy chain, l 99.5 4E-14 1.4E-18 139.8 14.8 179 18-201 29-250 (256)
418 1wit_A Twitchin 18TH IGSF modu 99.5 1.9E-14 6.4E-19 116.9 10.3 90 11-106 1-92 (93)
419 3tv3_H PGT128 heavy chain, IG 99.5 6.1E-14 2.1E-18 136.8 15.5 177 423-649 8-235 (239)
420 3qhz_H Human monoclonal antibo 99.5 4.2E-14 1.4E-18 137.4 14.3 176 424-649 9-227 (232)
421 1ow0_A IG alpha-1 chain C regi 99.5 3.6E-16 1.2E-20 149.8 -0.5 178 561-779 7-209 (214)
422 1gxe_A Myosin binding protein 99.5 1.3E-14 4.4E-19 126.3 9.3 85 565-650 25-138 (139)
423 1ypz_E T cell receptor delta, 99.5 9E-14 3.1E-18 132.0 15.9 166 420-642 6-200 (207)
424 3mlr_H Human monoclonal anti-H 99.5 4.2E-14 1.4E-18 136.6 13.8 173 18-195 6-219 (226)
425 3irg_B Obscurin-like protein 1 99.5 4.4E-14 1.5E-18 118.3 12.2 99 5-107 6-104 (107)
426 2edj_A Roundabout homolog 2; K 99.5 2.5E-14 8.5E-19 118.1 10.5 92 556-650 6-97 (100)
427 2kkq_A Myotilin; unknown funct 99.5 7.5E-14 2.6E-18 118.4 13.4 99 7-108 10-109 (116)
428 2edn_A Myosin-binding protein 99.5 4E-14 1.4E-18 117.8 11.2 107 2-108 2-116 (118)
429 1x44_A Myosin-binding protein 99.5 4.8E-14 1.6E-18 116.9 11.5 90 556-651 4-96 (103)
430 3puc_A Titin; I-SET IG-like do 99.5 8.3E-14 2.8E-18 114.7 12.8 94 10-107 4-97 (99)
431 3u2s_H PG9 heavy chain; greek 99.5 6.9E-14 2.4E-18 136.8 14.0 179 422-650 6-237 (248)
432 2ckn_A Basic fibroblast growth 99.5 2E-14 6.8E-19 117.2 8.5 87 557-649 8-94 (95)
433 1u2h_A APEG-1, aortic preferen 99.5 9.3E-14 3.2E-18 114.4 12.7 95 10-107 3-97 (99)
434 1fhg_A Telokin; immunoglobulin 99.5 6.9E-14 2.4E-18 125.7 12.6 92 558-650 41-133 (154)
435 3n9g_H FAB fragment of MAB CR4 99.5 1.5E-13 5.1E-18 133.2 15.7 175 424-650 9-224 (230)
436 2eo9_A Roundabout homolog 1; b 99.5 4.2E-14 1.4E-18 120.7 10.3 93 556-651 6-98 (118)
437 2lu7_A Obscurin-like protein 1 99.5 3.8E-14 1.3E-18 111.3 9.0 82 422-506 3-84 (84)
438 2dlt_A Myosin binding protein 99.5 4.5E-14 1.6E-18 117.8 10.0 91 556-650 6-96 (106)
439 2kdg_A Myotilin; immonoglobuli 99.5 6.6E-14 2.3E-18 115.5 10.9 94 11-107 4-97 (100)
440 1he7_A High affinity nerve gro 99.5 5.5E-14 1.9E-18 118.1 10.1 79 571-650 13-98 (126)
441 2eny_A Obscurin; beta-sandwich 99.5 5.5E-14 1.9E-18 116.4 10.0 89 557-650 7-96 (104)
442 2yr3_A Myosin light chain kina 99.5 4.3E-14 1.5E-18 116.4 9.2 94 6-106 5-98 (99)
443 2yuz_A Myosin-binding protein 99.5 9.9E-14 3.4E-18 113.7 11.1 92 414-507 6-97 (100)
444 1fhg_A Telokin; immunoglobulin 99.5 1.7E-13 5.8E-18 123.1 13.8 101 5-108 34-134 (154)
445 2lvc_A Obscurin-like protein 1 99.5 5E-14 1.7E-18 112.6 8.8 87 414-503 3-91 (91)
446 3irg_A Titin; IG-like, titin, 99.5 1.5E-13 5E-18 113.5 12.0 94 10-107 3-98 (100)
447 2aty_A Complement receptor chi 99.5 2.9E-14 9.9E-19 149.1 9.6 172 562-772 171-360 (376)
448 2eo9_A Roundabout homolog 1; b 99.5 6.7E-14 2.3E-18 119.4 10.2 112 9-129 5-117 (118)
449 2edn_A Myosin-binding protein 99.5 3.4E-14 1.2E-18 118.2 7.9 93 558-651 12-116 (118)
450 2edf_A Obscurin; beta-sandwich 99.5 8.4E-14 2.9E-18 115.5 10.1 89 556-650 6-94 (103)
451 3caf_A Fibroblast growth facto 99.5 2.3E-14 7.9E-19 118.3 6.6 91 558-649 4-99 (100)
452 2cry_A KIN of IRRE-like protei 99.5 5.7E-15 1.9E-19 127.0 3.0 92 559-652 15-114 (122)
453 2e6p_A Obscurin-like protein 1 99.5 9.2E-14 3.1E-18 115.5 10.3 89 557-651 6-97 (104)
454 2dm3_A KIAA0992 protein, palla 99.5 7.1E-14 2.4E-18 117.7 9.6 97 9-108 6-102 (110)
455 1wwb_X Protein (brain derived 99.5 9.3E-14 3.2E-18 114.8 10.0 79 571-650 14-97 (103)
456 3cx2_A Myosin-binding protein 99.5 1.2E-13 4E-18 115.6 10.7 92 558-650 4-107 (108)
457 1ypz_E T cell receptor delta, 99.5 3.9E-13 1.3E-17 127.6 15.7 164 563-775 6-199 (207)
458 2dm2_A Palladin; beta-sandwich 99.5 1.7E-13 5.7E-18 115.3 11.5 97 9-108 5-102 (110)
459 2yuv_A Myosin-binding protein 99.5 2.8E-13 9.7E-18 111.5 12.5 88 557-650 6-94 (100)
460 2k1m_A Myosin-binding protein 99.5 2.4E-13 8.1E-18 110.7 11.7 87 558-650 8-94 (95)
461 1nct_A Titin; cell adhesion, g 99.5 4.7E-14 1.6E-18 117.4 7.5 95 9-107 11-105 (106)
462 2ckn_A Basic fibroblast growth 99.5 1.3E-13 4.5E-18 112.3 9.9 89 9-106 6-94 (95)
463 3bn3_B ICAM-5, intercellular a 99.5 5E-13 1.7E-17 122.3 14.6 163 13-190 3-174 (196)
464 3cx2_A Myosin-binding protein 99.5 4.8E-13 1.6E-17 111.8 13.3 98 10-107 2-107 (108)
465 2bk8_A Connectin, M1, titin he 99.5 7.3E-13 2.5E-17 108.4 14.0 90 14-107 3-93 (97)
466 1pd6_A Cardiac MYBP-C;, myosin 99.5 3.3E-13 1.1E-17 111.5 11.4 89 556-650 13-103 (104)
467 2edk_A Myosin-binding protein 99.5 5.8E-14 2E-18 116.0 6.7 89 556-650 6-98 (101)
468 2edh_A Obscurin; structural ge 99.5 2.4E-13 8.2E-18 114.9 10.6 85 559-650 20-104 (113)
469 1wwb_X Protein (brain derived 99.5 6.7E-13 2.3E-17 109.6 13.0 95 10-107 2-97 (103)
470 3kvq_A Vascular endothelial gr 99.5 7.2E-14 2.5E-18 117.2 7.3 91 558-651 10-100 (108)
471 2edj_A Roundabout homolog 2; K 99.5 2.3E-13 7.9E-18 112.2 10.2 91 10-107 6-97 (100)
472 1iam_A ICAM-1, CD54, intercell 99.5 2.2E-12 7.6E-17 117.1 17.4 156 120-312 6-166 (185)
473 2e7c_A Myosin-binding protein 99.5 6.3E-13 2.2E-17 113.3 12.7 93 10-107 19-114 (118)
474 3kvq_A Vascular endothelial gr 99.4 1.5E-13 5E-18 115.3 8.3 96 7-108 5-100 (108)
475 2e6q_A Obscurin-like protein 1 99.4 8.5E-13 2.9E-17 109.1 12.6 88 557-650 7-104 (112)
476 3mlr_H Human monoclonal anti-H 99.4 9.1E-13 3.1E-17 127.1 15.0 171 424-646 9-221 (226)
477 3iu4_H CHP3 FAB heavy chain; a 99.4 3.8E-13 1.3E-17 132.8 12.3 172 424-647 9-220 (263)
478 2cr6_A KIAA1556 protein, obscu 99.4 2E-13 7E-18 115.6 9.0 98 2-107 3-101 (115)
479 3u1s_H FAB PGT145 heavy chain; 99.4 5E-13 1.7E-17 132.5 13.2 178 18-200 29-263 (267)
480 2cr6_A KIAA1556 protein, obscu 99.4 2.8E-13 9.4E-18 114.8 9.1 89 557-650 12-101 (115)
481 3sob_H Antibody heavy chain, l 99.4 7.5E-13 2.6E-17 130.6 13.7 175 424-650 32-250 (256)
482 3bfo_A Mucosa-associated lymph 99.4 5E-13 1.7E-17 107.8 10.2 83 558-650 3-86 (91)
483 1he7_A High affinity nerve gro 99.4 1.4E-12 4.9E-17 109.5 12.8 94 10-107 2-98 (126)
484 2edh_A Obscurin; structural ge 99.4 1.4E-12 4.8E-17 110.2 12.8 95 3-107 10-104 (113)
485 2eny_A Obscurin; beta-sandwich 99.4 2.7E-13 9.2E-18 112.2 8.0 94 7-108 3-97 (104)
486 1x44_A Myosin-binding protein 99.4 1.3E-12 4.4E-17 108.2 11.5 89 11-108 6-96 (103)
487 2edf_A Obscurin; beta-sandwich 99.4 7.4E-13 2.5E-17 109.8 9.8 91 8-107 4-94 (103)
488 2e7b_A Obscurin; IG-like domai 99.4 7.8E-13 2.7E-17 109.6 9.8 88 557-650 7-94 (103)
489 3caf_A Fibroblast growth facto 99.4 7.5E-13 2.6E-17 109.1 9.3 91 10-106 2-99 (100)
490 2dlt_A Myosin binding protein 99.4 5.5E-13 1.9E-17 111.1 8.4 92 9-107 5-96 (106)
491 2v9t_A Roundabout homolog 1; s 99.4 3.6E-13 1.2E-17 114.7 7.4 93 557-650 8-108 (117)
492 2cry_A KIN of IRRE-like protei 99.4 1.3E-13 4.3E-18 118.5 4.6 103 5-108 7-113 (122)
493 1hxm_A Gamma-delta T-cell rece 99.4 2.9E-12 9.9E-17 123.1 14.5 165 15-190 4-198 (229)
494 1gxe_A Myosin binding protein 99.4 6.8E-13 2.3E-17 115.4 9.1 86 18-107 24-138 (139)
495 3f8u_B Tapasin; endoplasmic re 99.4 4.2E-12 1.4E-16 128.8 16.2 169 17-189 163-388 (401)
496 2edk_A Myosin-binding protein 99.4 3.4E-13 1.2E-17 111.3 6.8 92 7-107 3-98 (101)
497 3bfo_A Mucosa-associated lymph 99.4 2E-12 6.9E-17 104.2 11.2 84 11-107 2-86 (91)
498 2dku_A KIAA1556 protein; beta- 99.4 2E-12 6.8E-17 107.1 11.2 88 557-650 7-94 (103)
499 2cpc_A KIAA0657 protein; immun 99.4 4.2E-12 1.5E-16 107.2 13.5 87 558-650 10-99 (113)
500 2cr3_A Basic fibroblast growth 99.4 4.9E-13 1.7E-17 109.7 7.1 81 564-650 9-89 (99)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=9.9e-74 Score=639.87 Aligned_cols=552 Identities=26% Similarity=0.438 Sum_probs=472.1
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|..++..+.+.+|++++|.|.+.|.|.+.|.|+|++..+....++.+...++ ..+|.|.+++.+|+|.|+|
T Consensus 3 ~~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C 78 (570)
T 3b43_A 3 MEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNN----VASLVINKVDHSDVGEYTC 78 (570)
T ss_dssp CCCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTT----EEEEEESSCCGGGCEEEEE
T ss_pred CCCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECC----EEEEEEccCChhhCEEEEE
Confidence 469999999999999999999999999999999999999999998777776654433 2569999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccce---EEEeCCEE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ---ITSEKNTH 166 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~---~~~~~~~~ 166 (785)
.|.|..|.......+.|.. ...+|.+...+.......|+.+.|.|.+.|.|++.|+|+|||..+.... ........
T Consensus 79 ~a~N~~g~~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~ 157 (570)
T 3b43_A 79 KAENSVGAVASSAVLVIKE-RKLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVA 157 (570)
T ss_dssp EEEETTEEEEEEEEEEECC-CCCCCEESSCCCCEEEETTSCEEEEEEEESSSSCEEEEEETTEECCCCSSEEEEEETTEE
T ss_pred EEEeCCceEEEEEEEEECC-CCCCCcccccCCCeEecCCCeEEEEEEEccCCCCEEEEEECCEECcCCCCEEEEEECCEE
Confidence 9999999887777777653 3356778777788888999999999999999999999999999987542 23345567
Q ss_pred EEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcce
Q psy2775 167 TLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVS 246 (785)
Q Consensus 167 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 246 (785)
+|.|.++..+|+|.|+|.|.|..|....++.|.|.... .+|.+...+....
T Consensus 158 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~-----------------------------~pp~~~~~p~~~~ 208 (570)
T 3b43_A 158 TLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHE-----------------------------VPPFFDLKPVSVD 208 (570)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC-----------------------------CCCEEEECCCCBC
T ss_pred EEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCC-----------------------------CCCccccCCceeE
Confidence 89999999999999999999999998888888886432 4466766677778
Q ss_pred eCCCCeEEEEEEEccCCCCeEEEEECCEEcc---cceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEEe
Q psy2775 247 ITEGESAVLSVQVGGEPSPKVEWYKDGKLIK---DRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 323 (785)
Q Consensus 247 ~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~ 323 (785)
+.+|+.+.|.|.+.|.|++.++|+++|..+. ...+........|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 209 v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 288 (570)
T 3b43_A 209 LALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ 288 (570)
T ss_dssp CBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCB
T ss_pred ecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEee
Confidence 8899999999999999999999999999886 2344555667899999999999999999999999998888999988
Q ss_pred ccccceeeec-cceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEe
Q psy2775 324 QGKAEFIKKL-DDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLP 401 (785)
Q Consensus 324 ~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 401 (785)
.+ |.+.... ....+.+|+.+.|.|.+.+ |.+.++|+++|..+..+.++.+...+....|.|.++..+|+|.|+|.|.
T Consensus 289 ~~-p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 367 (570)
T 3b43_A 289 EP-PRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAH 367 (570)
T ss_dssp CC-CEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEE
T ss_pred cC-CcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEE
Confidence 64 4444333 3456789999999999988 7889999999999988887777666666779999999999999999999
Q ss_pred ccceEE----EEEEEecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEcc
Q psy2775 402 DQETSA----ELNVVELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFS 476 (785)
Q Consensus 402 n~~~~~----~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 476 (785)
|..+.. .+.| ..||.+...+....+.+|+.+.|.|.+.+ |.|.+.|+|++..+..+.++.+..++....|.|.+
T Consensus 368 N~~g~~~~~~~l~V-~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~ 446 (570)
T 3b43_A 368 NAAGSASSSTSLKV-KEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILN 446 (570)
T ss_dssp BTTBCCEEEEEECE-ECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECS
T ss_pred eCCCEEEEEEEEEe-cCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECC
Confidence 976533 3334 35777777778888899999999999998 78899999999999888888888888888999999
Q ss_pred CCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 477 AGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 477 ~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
+..+|+|.|+|.|.|. |.....+.|.|..+
T Consensus 447 v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~------------------------------------------------- 477 (570)
T 3b43_A 447 VDSADIGEYQCKASNDVGSDTCVGSITLKAP------------------------------------------------- 477 (570)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEECCC-------------------------------------------------
T ss_pred CChhhCEEEEEEEEECCCeEEEEEEEEeccC-------------------------------------------------
Confidence 9999999999999998 88888888888765
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEec-CCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLL-SSPKKREIFDGENIILELKEADSETDAGDYKVVA 634 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~-~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a 634 (785)
|.|...+.+..+.+|++++|.|.+.|.|+|.|.|+|++..+. .+.+..+...+...+|.|.++.. +|+|.|+|.|
T Consensus 478 ---P~~~~~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a 553 (570)
T 3b43_A 478 ---PRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEP-ANAGKYTCQI 553 (570)
T ss_dssp ---CEEEECCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCT-TCCEEEEEEE
T ss_pred ---CcccccCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCH-HHCEEEEEEE
Confidence 666767778889999999999999999999999999986654 44555555667788999999999 9999999999
Q ss_pred EcCCcceEEEEEEEEE
Q psy2775 635 TNELGSATHGARVTVD 650 (785)
Q Consensus 635 ~n~~g~~~~~~~l~V~ 650 (785)
.|..|.+..++.|.|.
T Consensus 554 ~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 554 KNEAGTQECFATLSVL 569 (570)
T ss_dssp ECSSCEEEEEEEECCB
T ss_pred EECCcEEEEEEEEEEe
Confidence 9999999999999874
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=7.4e-70 Score=608.56 Aligned_cols=542 Identities=24% Similarity=0.422 Sum_probs=451.1
Q ss_pred CCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEEEeCCEEEEEEcccCCCCcEEEEEEEEc
Q psy2775 111 PEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QITSEKNTHTLTLIQCSTKDKGRYSVKVTN 187 (785)
Q Consensus 111 ~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 187 (785)
..||.|..++..+.+.+|+.+.|.|.+.|.|.+.|+|+|||..+... .+.......+|.|.++..+|+|.|+|.|.|
T Consensus 3 ~~pP~f~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 82 (570)
T 3b43_A 3 MEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAEN 82 (570)
T ss_dssp CCCCEEEECCCCEEECTTSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCCcceEECCceEEcCCCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEe
Confidence 36889999999999999999999999999999999999999988643 233445678999999999999999999999
Q ss_pred CCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeE
Q psy2775 188 KEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKV 267 (785)
Q Consensus 188 ~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v 267 (785)
..|.......+.|.... .+|.+...+......+|+.+.|.|.+.|.|++.+
T Consensus 83 ~~g~~~~~~~l~v~~~~-----------------------------~~p~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v 133 (570)
T 3b43_A 83 SVGAVASSAVLVIKERK-----------------------------LPPSFARKLKDVHETLGFPVAFECRINGSEPLQV 133 (570)
T ss_dssp TTEEEEEEEEEEECCCC-----------------------------CCCEESSCCCCEEEETTSCEEEEEEEESSSSCEE
T ss_pred CCceEEEEEEEEECCCC-----------------------------CCCcccccCCCeEecCCCeEEEEEEEccCCCCEE
Confidence 99988888888776432 3466666667777889999999999999999999
Q ss_pred EEEECCEEccc---ceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEEec--cccceeeeccceeEeeCc
Q psy2775 268 EWYKDGKLIKD---RQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDQ--GKAEFIKKLDDLEVKERE 342 (785)
Q Consensus 268 ~W~~~~~~l~~---~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~--~~~~~~~~~~~~~~~~g~ 342 (785)
+|+++|..+.. ..........+|.|.++..+|+|.|+|.|.|..|....++.|.|.. .++.+...+....+.+|+
T Consensus 134 ~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~pp~~~~~p~~~~v~~G~ 213 (570)
T 3b43_A 134 SWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGE 213 (570)
T ss_dssp EEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCEEEECCCCBCCBSBS
T ss_pred EEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCCCCCCccccCCceeEecCCC
Confidence 99999998872 2233455678999999999999999999999999888888888764 355565566677788999
Q ss_pred cEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccceEEEEEE---EecCCcc
Q psy2775 343 NAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQETSAELNV---VELPPEI 418 (785)
Q Consensus 343 ~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~~v---~~~~~~~ 418 (785)
.+.|.|.+.+ |++.++|+++|..+..+.++.+...+....|.|.++..+|+|.|+|.|.|..+.....+ +..+|.+
T Consensus 214 ~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~ 293 (570)
T 3b43_A 214 SGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRF 293 (570)
T ss_dssp CEEEEEEEESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEE
T ss_pred eEEEEEEEEECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcc
Confidence 9999999988 67899999999999887777766666666799999999999999999999776554332 2335555
Q ss_pred cccC-CCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-Ccc
Q psy2775 419 SVPL-QDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDK 495 (785)
Q Consensus 419 ~~~~-~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~ 495 (785)
...+ ....+.+|+.+.|.|.+.+ |.+.+.|+|++..+..+.++.+...+....|.|.+++.+|+|.|+|.|.|. |..
T Consensus 294 ~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 373 (570)
T 3b43_A 294 IKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSA 373 (570)
T ss_dssp EECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCC
T ss_pred cccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEE
Confidence 4433 3345789999999999998 788999999999998888888877777889999999999999999999998 888
Q ss_pred eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCe
Q psy2775 496 ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGT 575 (785)
Q Consensus 496 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~ 575 (785)
..++.|.|..+ |.|...+.+..+.+|+.
T Consensus 374 ~~~~~l~V~~~----------------------------------------------------P~~~~~~~~~~~~~G~~ 401 (570)
T 3b43_A 374 SSSTSLKVKEP----------------------------------------------------PVFRKKPHPVETLKGAD 401 (570)
T ss_dssp EEEEEECEECC----------------------------------------------------CEECSCCCCEEECTTCC
T ss_pred EEEEEEEecCC----------------------------------------------------CeeecCCCceeecCCCE
Confidence 88899999876 44444445667889999
Q ss_pred EEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEeeccC
Q psy2775 576 IRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVDVEKVG 655 (785)
Q Consensus 576 v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 655 (785)
++|.|.+.|.|.|.|+|+|+|.++..+.++.+..++...+|.|.++.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 402 v~l~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~A~N~~G~~~~~~~l~v~----- 475 (570)
T 3b43_A 402 VHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDS-ADIGEYQCKASNDVGSDTCVGSITLK----- 475 (570)
T ss_dssp EEEEEEEESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEECSSCEEEEEEEEEEC-----
T ss_pred EEEEEEEecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCCh-hhCEEEEEEEEECCCeEEEEEEEEec-----
Confidence 999999999999999999999999888888888888888999999999 99999999999999999988888876
Q ss_pred CCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeEEEEEEEecCCCCceEEeECCEEe
Q psy2775 656 RPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRFKALPPPKAEWTVNGTVI 735 (785)
Q Consensus 656 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~~~~~ 735 (785)
.+|.+.. ......+..|+.+.|.|.+.|.|+|.|+|+|+|..+
T Consensus 476 ------------------------------------~~P~~~~-~~~~~~~~~g~~~~l~c~~~g~p~~~v~W~k~~~~~ 518 (570)
T 3b43_A 476 ------------------------------------APPRFVK-KLSDISTVVGEEVQLQATIEGAEPISVAWFKDKGEI 518 (570)
T ss_dssp ------------------------------------CCCEEEE-CCCCBCCBTTCCEEEEEEEESCSSCCCEEEETTEEC
T ss_pred ------------------------------------cCCcccc-cCCCceecCCCeEEEEEEEecCCCCEEEEEeCCeEe
Confidence 4565543 334556889999999999999999999999998665
Q ss_pred e-eccccccch-hhhcccccceeeeeeceEEEEEEecccceeE
Q psy2775 736 V-PSKRVKGKA-EFIKKLDDLEVKERENAVLEVEVTSDKADVK 776 (785)
Q Consensus 736 ~-~~~~~~~~~-~~~~~l~~~~v~~~~~~~~~c~~~~~~~~~~ 776 (785)
. .+.++.+.. .-...|.+..+...|+|.|+|.+.+..+..+
T Consensus 519 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 561 (570)
T 3b43_A 519 VRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQE 561 (570)
T ss_dssp CCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEE
T ss_pred ccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEE
Confidence 4 444544432 2234788889999999999999998655443
No 3
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.1e-67 Score=599.85 Aligned_cols=597 Identities=18% Similarity=0.295 Sum_probs=450.3
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEE-Eeec-----------CCcc-ceEEEEEEcccCC
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVV-FSDQ-----------SDMH-SYVSIVTIKSIKK 81 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~-~~~~-----------~~~~-~~~~~L~i~~~~~ 81 (785)
|+.+|.++.+.+|++++|.|...+.+.+.|.|++++. ......+. +..+ +... ....+|+|.+++.
T Consensus 2 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~-~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~~~sL~I~~v~~ 80 (642)
T 1e07_A 2 LTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGER-VDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQ 80 (642)
T ss_pred ceEeccCCcccccccEEEEEccCCCCceEEEEECCcc-cCCcceEEEEEccccccccCccccCceeeccCCcEEECCCCc
Confidence 5677889999999999999997666677899998543 22111111 0000 0000 0113699999999
Q ss_pred CCCeEEEEEEEcCC-eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc-eE
Q psy2775 82 REEGVYTVVAKNRE-GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR-QI 159 (785)
Q Consensus 82 ~D~G~Y~C~a~~~~-~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~-~~ 159 (785)
+|+|.|+|.+.+.. +.....+.|.|.. .+.+|.+... ....+..|+.+.|.|.+.+ |.+.++|++||..+... ..
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~~~~p~i~~~-~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~ 157 (642)
T 1e07_A 81 NDTGFYTLHVIKSDLVNEEATGQFRVYP-ELPKPSISSN-NSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRL 157 (642)
T ss_pred ccCcEEEEEEEcCCCeEEEEEEEEEecc-cCCCCcEEcc-CceeEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCce
Confidence 99999999999864 4445566677753 2335555543 3456788999999999988 88999999999988754 23
Q ss_pred EEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeE-EEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCee
Q psy2775 160 TSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV-ESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSI 238 (785)
Q Consensus 160 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 238 (785)
........|.|.++..+|+|.|+|.|.|..|.. +..+.|.|...+ ..|.+
T Consensus 158 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p-----------------------------~~~~~ 208 (642)
T 1e07_A 158 QLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGP-----------------------------DAPTI 208 (642)
T ss_pred EEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCC-----------------------------CCcEE
Confidence 333345689999999999999999999988754 345777776432 11222
Q ss_pred eecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEE-
Q psy2775 239 LEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA- 317 (785)
Q Consensus 239 ~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~- 317 (785)
.+....+.+|+.+.|.|.+.|+|.+.+.|+++|..+. ....|.|.++..+|+|.|+|.|.|..|....+
T Consensus 209 --~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~--------~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~ 278 (642)
T 1e07_A 209 --SPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQ--------STQELFIPNITVNNSGSYTCQAHNSDTGLNRTT 278 (642)
T ss_pred --ecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEcc--------cCCceEEecccccCCeEEEEEEEeCCCceEEee
Confidence 2345567899999999999999999999999998874 23479999999999999999999998866544
Q ss_pred -EEEEEeccccceeee-ccceeEeeCccEEEEEEEcCCCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceE
Q psy2775 318 -ANLNVDQGKAEFIKK-LDDLEVKERENAVLEVEVTSDKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGE 395 (785)
Q Consensus 318 -~~l~v~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 395 (785)
+.|.|...++..... .....+..|+.+.|.|.+.+.++.++|+++|..+....++.+...+. .|.|.++..+|+|.
T Consensus 279 ~~~v~v~~~~~~p~i~~~~~~~~~~g~~v~l~C~~~~~p~~v~W~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~ 356 (642)
T 1e07_A 279 VTTITVYAEPPKPFITSNNSNPVEDEDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGP 356 (642)
T ss_pred eEEEEEEccCCCCEEEcCCceeEecCCcEEEEEECCCCCccEEEEECCccCCCcCCEEEeCCCC--EEEEeccCcccCee
Confidence 556666543332222 23344556788999999998778999999999988777776655443 49999999999999
Q ss_pred EEEEEeccceE-----EEEEEEecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcE
Q psy2775 396 YTCSLPDQETS-----AELNVVELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKK 469 (785)
Q Consensus 396 Y~C~a~n~~~~-----~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~ 469 (785)
|+|.|.|..+. ..+.|...|+.+...+....+.+|+.++|.|.+.+ |.+.+.|+++|..+...
T Consensus 357 Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~----------- 425 (642)
T 1e07_A 357 YECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHT----------- 425 (642)
T ss_pred EEEEEeCCCCCcceeeEEEEEEcCCCCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCC-----------
Confidence 99999986543 45566665655555666778889999999999988 78899999999887532
Q ss_pred EEEEEccCCCCCcEEEEEEEeec-CcceeEEEEE--EEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccc
Q psy2775 470 QKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLT--VEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFI 546 (785)
Q Consensus 470 ~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 546 (785)
..|.|.++..+|+|.|+|.|.|. |....+..+. |..++.
T Consensus 426 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~-------------------------------------- 467 (642)
T 1e07_A 426 QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELP-------------------------------------- 467 (642)
T ss_pred ceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCC--------------------------------------
Confidence 36999999999999999999997 6666554444 443210
Q ss_pred ccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCC
Q psy2775 547 VPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETD 626 (785)
Q Consensus 547 ~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d 626 (785)
+|.+.. .....+.+|++++|.|.+.+ |.+.+.|+|+|..+..+.++.+.. +..+|.|.++.. +|
T Consensus 468 -----------~p~i~~-~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~g~~l~~~~~~~~~~--~~~~L~i~~v~~-~d 531 (642)
T 1e07_A 468 -----------KPSISS-NNSKPVEDKDAVAFTCEPEA-QNTTYLWWVNGQSLPVSPRLQLSN--GNRTLTLFNVTR-ND 531 (642)
T ss_pred -----------CceEec-CCceeecCCCeEEEEEECCC-CCcEEEEEECCEeCCCCCcEEEcC--CCcEEEEeecCh-hc
Confidence 122222 23557889999999999995 888999999999998776654433 345799999999 99
Q ss_pred ceeEEEEEEcCCcceEE-EEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEE
Q psy2775 627 AGDYKVVATNELGSATH-GARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVL 705 (785)
Q Consensus 627 ~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~ 705 (785)
+|.|+|.|.|..|...+ .+.|.|. .+|......+....
T Consensus 532 ~G~Y~C~a~n~~g~~~s~~~~l~V~-----------------------------------------~~p~~~~~~~~~~~ 570 (642)
T 1e07_A 532 ARAYVCGIQNSVSANRSDPVTLDVL-----------------------------------------YGPDTPIISPPDSS 570 (642)
T ss_pred CceEEEEeEcCCCCccCCCEEEEEE-----------------------------------------eCCCcceecCCcee
Confidence 99999999999997654 5777776 22221112334567
Q ss_pred eecCCeEEEEEEEecCCCCceEEeECCEEeeeccccccchhhhcccccceeeeeeceEEEEEEeccc
Q psy2775 706 VKKGEDLKIEVRFKALPPPKAEWTVNGTVIVPSKRVKGKAEFIKKLDDLEVKERENAVLEVEVTSDK 772 (785)
Q Consensus 706 ~~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~c~~~~~~ 772 (785)
+..|+.++|.|.+.|.|+|.|+|++||..+..+ ..|.+..+...|+|.|+|.+.+..
T Consensus 571 v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~----------~~L~i~~~~~~d~G~Y~C~a~N~~ 627 (642)
T 1e07_A 571 YLSGANLNLSCHSASNPSPQYSWRINGIPQQHT----------QVLFIAKITPNNNGTYACFVSNLA 627 (642)
T ss_pred EEcCCcEEEEEEeccCCCCeEEEEECCEECccC----------ceEEECcccccCCeEEEEEEEecc
Confidence 889999999999999999999999999998754 257788889999999999998743
No 4
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=7.2e-68 Score=621.02 Aligned_cols=661 Identities=18% Similarity=0.260 Sum_probs=496.5
Q ss_pred CCCCeeeecCCc-eEecCCCeEEEEEEEEecCCCeeEEEE-CCEEccCCCCEEEeecCCccceEEEEEEcccCCCC----
Q psy2775 10 GIPPTFSKKTKP-VYAEENSEVTLEVRLVAVPEPDLLWYY-NGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKRE---- 83 (785)
Q Consensus 10 ~~~p~~~~~~~~-~~v~~G~~v~l~C~~~g~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D---- 83 (785)
..+|.|..+|.. +.+.+|++++|.|.+.|.|.+.|.|++ +|..+....+......+ .+|.|.+++.+|
T Consensus 36 ~~~P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~------g~l~i~~~~~~~~~~~ 109 (816)
T 3dmk_A 36 QKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSD------GKLVFPPFRAEDYRQE 109 (816)
T ss_dssp CEEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECST------TEEEECCCCGGGCCHH
T ss_pred cCCCcEEeCCCCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeC------CcEEEcCCChHHcccc
Confidence 346999988876 679999999999999999999999999 78777644332222222 249999998887
Q ss_pred --CeEEEEEEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccC-C--CeEEEeECCEEcc--
Q psy2775 84 --EGVYTVVAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEP-S--PKVEWYKDGKLIK-- 155 (785)
Q Consensus 84 --~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p-~--~~v~W~~~g~~~~-- 155 (785)
+|.|+|.|.|..|.. +..+.|.+. ..+.+...+....+.+|+.+.|.|.+.+.+ . +.+.|++++..+.
T Consensus 110 ~d~G~Y~C~a~n~~G~~~S~~~~v~~~----~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~ 185 (816)
T 3dmk_A 110 VHAQVYACLARNQFGSIISRDVHVRAV----VAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFP 185 (816)
T ss_dssp HHEEEEEEEEEETTEEEEEEEEEEEEE----CCCCCCCBCCCEEEETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECB
T ss_pred ccceEEEEEEecCcceEEccceEEEEE----EccccEEEEecceEecCceEEEEECCCccccccEEEEEEEecCceEecc
Confidence 999999999999976 555666654 234445555677899999999999986543 2 6899999876542
Q ss_pred ----cceEEEeCCEEEEEEcccCCCCc-EEEEEEEEcCCee-EEE---EEEEEeecCCCCCCCCCCCCCCCcccccccee
Q psy2775 156 ----DRQITSEKNTHTLTLIQCSTKDK-GRYSVKVTNKEGT-VES---AANLNVDPYEPKESKETPPSPPPYVVSELDTL 226 (785)
Q Consensus 156 ----~~~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~g~-~~~---~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (785)
...... ....+|.|.+++.+|+ |.|+|.|.|..+. ... ...+.|....
T Consensus 186 ~~~~~~r~~~-~~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~---------------------- 242 (816)
T 3dmk_A 186 GAEYDGKYLV-LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPI---------------------- 242 (816)
T ss_dssp SSCBTTTEEE-CTTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCC----------------------
T ss_pred ccCCCceEEE-ecCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCC----------------------
Confidence 112222 2233799999999998 9999999975532 221 1345554211
Q ss_pred eecCCCCCCCeeeecC--CcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcc-------cceEEEeCCEEEEEEccCCC
Q psy2775 227 QVNTGKPEKPSILEPL--HDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIK-------DRQITSEKNTHTLTLIQCST 297 (785)
Q Consensus 227 ~~~~~~~~~p~~~~~~--~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~-------~~~~~~~~~~~~l~i~~~~~ 297 (785)
...+|.+.... ....+..|+.+.|.|.+.|.|.+.+.|+|++.... ....... ..+|.|.++..
T Consensus 243 -----~~~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~ 315 (816)
T 3dmk_A 243 -----SSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQV--SGTLIIKDAVV 315 (816)
T ss_dssp -----SCCCCBCCGGGGEEEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEE--TTEEEECSCCG
T ss_pred -----CCCCCccccccCccceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEec--cceEEECCCCH
Confidence 00234443321 34577899999999999999999999999543221 1112222 23899999999
Q ss_pred CCCeEEEEEEEeCCCceEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEE
Q psy2775 298 KDKGRYSVKVTNKEGTVESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEK 376 (785)
Q Consensus 298 ~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~ 376 (785)
+|+|.|+|.|.|..|.....+.|.|.. ++.+...+....+.+|+.+.|.|.+.+ |.+.++|+++|..+.....
T Consensus 316 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~-~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~----- 389 (816)
T 3dmk_A 316 EDSGKYLCVVNNSVGGESVETVLTVTA-PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES----- 389 (816)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEECE-EEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSS-----
T ss_pred hHCEEEEEEEEcCCCceEEEEEEEEcC-CCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCC-----
Confidence 999999999999999888888888875 444555566778899999999999987 7889999999998865421
Q ss_pred cCcEEEEEEcCCCCCCceEEEEEEeccceEEEE----EEE--ecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEE
Q psy2775 377 KGTIRKLLIRNISVHDEGEYTCSLPDQETSAEL----NVV--ELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWY 449 (785)
Q Consensus 377 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~----~v~--~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~ 449 (785)
.|.|.++..+|+|.|+|.|.|..+.... .+. ..||.+...+....+.+|+.+.|.|.+.+ +.+.+.|+
T Consensus 390 -----~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~ 464 (816)
T 3dmk_A 390 -----VLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWE 464 (816)
T ss_dssp -----EEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEE
T ss_pred -----EEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEE
Confidence 3999999999999999999997665432 232 35677777777788999999999999998 78899999
Q ss_pred ECCEEcccCCCEEEEE-----eCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEecc
Q psy2775 450 KDGKEIAFSENVTLSI-----DGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHL 523 (785)
Q Consensus 450 ~~~~~~~~~~~~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~ 523 (785)
++|..+....++.... ....+.|.|.++..+|+|.|+|.|.|. |....++.|.|..+|. +...+. ..+..+
T Consensus 465 ~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~--~~~~~~-~~v~~G 541 (816)
T 3dmk_A 465 LDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPY--IRQMEK-KAIVAG 541 (816)
T ss_dssp ETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCE--ECCCCC-EEEETT
T ss_pred ECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCe--eEccCC-eEEecC
Confidence 9999998777665532 123567999999999999999999998 8888899999988763 333333 455688
Q ss_pred CceeEEEEecC-CceeeEEeecccc----------------------------cccCCCCCCC-------------CCeE
Q psy2775 524 GDATFQVELSS-PDIQVKWLNLFIV----------------------------PTCPLGSPGQ-------------APLF 561 (785)
Q Consensus 524 ~~~~~~~~~~~-~~~~~~W~~~~~~----------------------------~~~~~~~~~~-------------~p~~ 561 (785)
..+.|.|.+.+ |...+.|++++.. |.|.+..... +|.+
T Consensus 542 ~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~ 621 (816)
T 3dmk_A 542 ETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRI 621 (816)
T ss_dssp CCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCC
T ss_pred CeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCcc
Confidence 99999999874 6678999988754 4454432211 1222
Q ss_pred ee-eeeeeeeeecCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEe-eCCeEEEEEccCCCCCCceeEEEEEEcCC
Q psy2775 562 IE-RFEEKTVKEKGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIF-DGENIILELKEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 562 ~~-~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~-~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~ 638 (785)
.. ......+.+|+.++|.|.+.+.|+| .|+|+++|..+..+.+..... .+...+|.|.++.. +|+|.|+|.|.|..
T Consensus 622 ~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~ 700 (816)
T 3dmk_A 622 IPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEA-SHAGNFTCHARNLA 700 (816)
T ss_dssp BCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCG-GGCEEEEEEEECSS
T ss_pred ccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCCh-hhCEEEEEEEEeCC
Confidence 11 1234568899999999999877665 999999999986655544433 34567899999999 99999999999999
Q ss_pred cceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeEEEEEEE
Q psy2775 639 GSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRF 718 (785)
Q Consensus 639 g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~ 718 (785)
|....++.|.|. .+|.+.. .+....+..|+.++|.|.+
T Consensus 701 g~~~~~~~l~V~-----------------------------------------~~P~~~~-~~~~~~v~~G~~v~l~C~~ 738 (816)
T 3dmk_A 701 GHQQFTTPLNVY-----------------------------------------VPPRWIL-EPTDKAFAQGSDAKVECKA 738 (816)
T ss_dssp CEEEEEEEECEE-----------------------------------------EEEEEEE-CCCCEEEETTCCEEEECEE
T ss_pred ccEEEEEEEEEE-----------------------------------------eCCceee-ecccceecCCCcEEEEEEE
Confidence 999988888887 4455543 3345678899999999999
Q ss_pred ecCCCCceEEeECCEEeeec-------cccccchhhhcccccceeeeeeceEEEEEEec
Q psy2775 719 KALPPPKAEWTVNGTVIVPS-------KRVKGKAEFIKKLDDLEVKERENAVLEVEVTS 770 (785)
Q Consensus 719 ~g~P~p~i~W~~~~~~~~~~-------~~~~~~~~~~~~l~~~~v~~~~~~~~~c~~~~ 770 (785)
.|.|.|.|+|++++..+... .+... -...|.+..+...|+|.|+|.+.+
T Consensus 739 ~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~d~G~Y~C~a~N 794 (816)
T 3dmk_A 739 DGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV---EEGTLHVDNIQKTNEGYYLCEAIN 794 (816)
T ss_dssp EEESCCEEECCEECSSSTTCCBCCCCBTTEEE---ETTEEEECSCCGGGCEEEEEEEEC
T ss_pred ecCCCCeEEEEecCCCCCccccccccCCCEEe---cCCEEEECcCChhhCeEEEEEEEe
Confidence 99999999999988654322 11111 112688889999999999999997
No 5
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=5.4e-61 Score=547.06 Aligned_cols=513 Identities=18% Similarity=0.314 Sum_probs=403.2
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVA 91 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 91 (785)
+|.|... ....+.+|++++|.|.+.+ |.+.+.|++++..+....++.+...+ ..|+|.+++.+|+|.|+|.|
T Consensus 112 ~p~i~~~-~~~~v~~g~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~C~a 183 (642)
T 1e07_A 112 KPSISSN-NSKPVEDKDAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNGN------RTLTLFNVTRNDTASYKCET 183 (642)
T ss_pred CCcEEcc-CceeEecCCcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcCCC------CEEEEeCCCcccCeeEEEEE
Confidence 5566543 3567889999999999988 88999999999999877776654433 35999999999999999999
Q ss_pred EcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEEEEE
Q psy2775 92 KNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTL 170 (785)
Q Consensus 92 ~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L~i 170 (785)
.|..+.. +..+.|.|.. .|+.+...+....+.+|+.+.|.|.+.|.|.+.++|++||..+.. ...|.|
T Consensus 184 ~n~~~~~~s~~~~l~V~~---~p~~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i~~--------~~~L~i 252 (642)
T 1e07_A 184 QNPVSARRSDSVILNVLY---GPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQS--------TQELFI 252 (642)
T ss_pred ecCCCCcccceEEEEEEe---CCCCcEEecCCcccccCCEEEEEEEcCCCCCcEEEEEECCeEccc--------CCceEE
Confidence 9987753 3456677763 122223334566788999999999999999999999999988742 346999
Q ss_pred cccCCCCcEEEEEEEEcCCeeEEEE--EEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeC
Q psy2775 171 IQCSTKDKGRYSVKVTNKEGTVESA--ANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSIT 248 (785)
Q Consensus 171 ~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 248 (785)
.+++.+|+|.|+|.|.|..|....+ +.|.|...+ .+|.+.. .....+.
T Consensus 253 ~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~-----------------------------~~p~i~~-~~~~~~~ 302 (642)
T 1e07_A 253 PNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEP-----------------------------PKPFITS-NNSNPVE 302 (642)
T ss_pred ecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccC-----------------------------CCCEEEc-CCceeEe
Confidence 9999999999999999998865544 455554321 2233332 2334455
Q ss_pred CCCeEEEEEEEccCCCCeEEEEECCEEccc-ceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceE-EEEEEEEeccc
Q psy2775 249 EGESAVLSVQVGGEPSPKVEWYKDGKLIKD-RQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE-SAANLNVDQGK 326 (785)
Q Consensus 249 ~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~-~~~~l~v~~~~ 326 (785)
.|+.+.|.|.+.+.| +.+.|+++|..+.. ...........|.|.++..+|+|.|+|.|.|..|... ..+.|.|...|
T Consensus 303 ~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p 381 (642)
T 1e07_A 303 DEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGP 381 (642)
T ss_pred cCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcCC
Confidence 688899999998876 69999999988762 2333333456899999999999999999999988643 45788888766
Q ss_pred cceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccce
Q psy2775 327 AEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQET 405 (785)
Q Consensus 327 ~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~ 405 (785)
..+...+....+.+|+.+.|.|.+.+ |.+.++|+++|..+... ..|.|.++..+|+|.|+|.|.|..+
T Consensus 382 ~~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g 450 (642)
T 1e07_A 382 DDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHT-----------QELFISNITEKNSGLYTCQANNSAS 450 (642)
T ss_pred CCCeecCCceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCC-----------ceEEEccCChhhCeEEEEEEEcCCC
Confidence 65555566778899999999999987 78899999999887542 2399999999999999999998654
Q ss_pred E------EEEEEEec--CCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccC
Q psy2775 406 S------AELNVVEL--PPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSA 477 (785)
Q Consensus 406 ~------~~~~v~~~--~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 477 (785)
. ..+.+... +|.+. ......+.+|+.++|.|.+.++.+.+.|+++|..+....++.+..++ ..|+|.++
T Consensus 451 ~~~~s~~~~v~v~~~~~~p~i~-~~~~~~v~~g~~v~l~C~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v 527 (642)
T 1e07_A 451 GHSRTTVKTITVSAELPKPSIS-SNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQSLPVSPRLQLSNGN--RTLTLFNV 527 (642)
T ss_pred CCcccceEEEEEeccCCCceEe-cCCceeecCCCeEEEEEECCCCCcEEEEEECCEeCCCCCcEEEcCCC--cEEEEeec
Confidence 2 22333332 33333 33456678999999999999888899999999999887777765544 58999999
Q ss_pred CCCCcEEEEEEEeec-Ccce-eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 478 GLEDAGEYSCRVGDT-GDKE-SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
..+|+|.|+|.|.|. |... ..+.|.|..+|.
T Consensus 528 ~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~----------------------------------------------- 560 (642)
T 1e07_A 528 TRNDARAYVCGIQNSVSANRSDPVTLDVLYGPD----------------------------------------------- 560 (642)
T ss_pred ChhcCceEEEEeEcCCCCccCCCEEEEEEeCCC-----------------------------------------------
Confidence 999999999999998 6543 368888886542
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
.+...+.+..+.+|+.++|.|.+.|+|.|.|+|+|+|..+..+ ..|.|.++.. +|+|.|+|.|.
T Consensus 561 ----~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~~-----------~~L~i~~~~~-~d~G~Y~C~a~ 624 (642)
T 1e07_A 561 ----TPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHT-----------QVLFIAKITP-NNNGTYACFVS 624 (642)
T ss_pred ----cceecCCceeEEcCCcEEEEEEeccCCCCeEEEEECCEECccC-----------ceEEECcccc-cCCeEEEEEEE
Confidence 2222234567899999999999999999999999999987532 3699999999 99999999999
Q ss_pred cCCcceEEEEEEEEEe
Q psy2775 636 NELGSATHGARVTVDV 651 (785)
Q Consensus 636 n~~g~~~~~~~l~V~~ 651 (785)
|..|....++.|.|.+
T Consensus 625 N~~G~~~~s~~l~V~v 640 (642)
T 1e07_A 625 NLATGRNNSIVKSITV 640 (642)
T ss_pred ecccCcceeEEEEEEE
Confidence 9999999999999875
No 6
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=2.8e-60 Score=556.69 Aligned_cols=532 Identities=23% Similarity=0.356 Sum_probs=424.3
Q ss_pred CCCeeeecC--CceEecCCCeEEEEEEEEecCCCeeEEEECCEEc------cCCCCEEEeecCCccceEEEEEEcccCCC
Q psy2775 11 IPPTFSKKT--KPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPL------QETDEVVFSDQSDMHSYVSIVTIKSIKKR 82 (785)
Q Consensus 11 ~~p~~~~~~--~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~------~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 82 (785)
.+|.|...+ ....+.+|++++|.|.+.|.|.+.+.|+|++... ....+... ...+|.|.+++.+
T Consensus 245 ~~P~i~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~--------~~~~L~i~~v~~~ 316 (816)
T 3dmk_A 245 AVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQ--------VSGTLIIKDAVVE 316 (816)
T ss_dssp CCCBCCGGGGEEEEEECTTSCEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEE--------ETTEEEECSCCGG
T ss_pred CCCccccccCccceEEeCCCeEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEe--------ccceEEECCCCHh
Confidence 367775433 5688999999999999999999999999954322 12222211 1135999999999
Q ss_pred CCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEe
Q psy2775 83 EEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSE 162 (785)
Q Consensus 83 D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~ 162 (785)
|+|.|+|.|.|..|.......|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.++|++||..+...
T Consensus 317 D~G~Y~C~a~n~~g~~~~~~~l~V~----~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~----- 387 (816)
T 3dmk_A 317 DSGKYLCVVNNSVGGESVETVLTVT----APLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS----- 387 (816)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEC----EEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCC-----
T ss_pred HCEEEEEEEEcCCCceEEEEEEEEc----CCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCC-----
Confidence 9999999999999988888888886 3556666667788999999999999999999999999999988543
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecC
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPL 242 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 242 (785)
...|.|.+++.+|+|.|+|.|.|..|....+..+.|.... .+|.+...+
T Consensus 388 --~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~-----------------------------~~p~i~~~~ 436 (816)
T 3dmk_A 388 --ESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRF-----------------------------DPPVIRQAF 436 (816)
T ss_dssp --SSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSS-----------------------------CCCEEEEEC
T ss_pred --CCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEcccc-----------------------------CCCceEecC
Confidence 3479999999999999999999999988888888775432 457777777
Q ss_pred CcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccc-eEEE-------eCCEEEEEEccCCCCCCeEEEEEEEeCCCce
Q psy2775 243 HDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR-QITS-------EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV 314 (785)
Q Consensus 243 ~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~-~~~~-------~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 314 (785)
....+.+|+.+.|.|.+.|+|.+.+.|+++|..+... .... ......|.|.++..+|+|.|+|.|.|..|..
T Consensus 437 ~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 516 (816)
T 3dmk_A 437 QEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVA 516 (816)
T ss_dssp CCEEECSSSCEEEEEEEECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEE
T ss_pred cceEEcCCCCEEEEEEEecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeE
Confidence 7788999999999999999999999999999988621 1111 1224579999999999999999999999998
Q ss_pred EEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCC-CCC
Q psy2775 315 ESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNIS-VHD 392 (785)
Q Consensus 315 ~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~-~~d 392 (785)
..++.|.|...| +........+..|+.+.|.|.+.+ |.+.+.|++++..+....+.....++. |.|.++. .+|
T Consensus 517 ~~~~~l~V~~~p--~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~~---l~i~~v~~~~d 591 (816)
T 3dmk_A 517 EHSAKLNVYGLP--YIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGT---LIIENVERNSD 591 (816)
T ss_dssp EEEEEEEECSSC--EECCCCCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEECTTSE---EEESSCCHHHH
T ss_pred EEEEEEEEecCC--eeEccCCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEecCCe---EEEEecCcccc
Confidence 888999998644 334445667889999999999987 667999999999998777766655554 9999998 689
Q ss_pred ceEEEEEEeccce-----EEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeC-C-CceEEEEECCEEcccCCCEEEEE
Q psy2775 393 EGEYTCSLPDQET-----SAELNVVELPPEISVPLQDVKVSRDEKASFEIELTK-G-DALVKWYKDGKEIAFSENVTLSI 465 (785)
Q Consensus 393 ~G~Y~C~a~n~~~-----~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~-~~~i~W~~~~~~~~~~~~~~~~~ 465 (785)
+|.|+|.|.|..+ ...+.+...|...........+.+|+.++|.|.+.+ + ++.+.|+++|..+..........
T Consensus 592 ~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W~~~g~~l~~~~~~~~~~ 671 (816)
T 3dmk_A 592 QATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSR 671 (816)
T ss_dssp CEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEEEETTBCCCGGGTCEEEE
T ss_pred CEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEEEECCeEcCCCCCeeEEE
Confidence 9999999998654 223334444444334445666889999999999976 3 34899999999987665555543
Q ss_pred -eCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEee
Q psy2775 466 -DGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLN 543 (785)
Q Consensus 466 -~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 543 (785)
.+..+.|+|.++..+|+|.|+|.|.|. |....++.|.|..+
T Consensus 672 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~------------------------------------- 714 (816)
T 3dmk_A 672 VGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVP------------------------------------- 714 (816)
T ss_dssp ETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEE-------------------------------------
T ss_pred cCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeC-------------------------------------
Confidence 345788999999999999999999998 88888888988865
Q ss_pred cccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCC-----eeEEeeCCeEEEEE
Q psy2775 544 LFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPK-----KREIFDGENIILEL 618 (785)
Q Consensus 544 ~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~-----~~~~~~~~~~~L~i 618 (785)
|.|...+.+..+.+|++++|.|.+.|+|.|.|+|+|++..+..... ...... ..+|.|
T Consensus 715 ---------------P~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~--~~~L~i 777 (816)
T 3dmk_A 715 ---------------PRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVE--EGTLHV 777 (816)
T ss_dssp ---------------EEEEECCCCEEEETTCCEEEECEEEEESCCEEECCEECSSSTTCCBCCCCBTTEEEE--TTEEEE
T ss_pred ---------------CceeeecccceecCCCcEEEEEEEecCCCCeEEEEecCCCCCccccccccCCCEEec--CCEEEE
Confidence 5555555677889999999999999999999999998765432111 011122 236999
Q ss_pred ccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 619 KEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 619 ~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.++.. +|+|.|+|.|.|..|++..++.+..+
T Consensus 778 ~~v~~-~d~G~Y~C~a~N~~G~~~~~v~~~~~ 808 (816)
T 3dmk_A 778 DNIQK-TNEGYYLCEAINGIGSGLSAVIMISV 808 (816)
T ss_dssp CSCCG-GGCEEEEEEEECSSSSCEEEEEEEEE
T ss_pred CcCCh-hhCeEEEEEEEeCCCCCcEEEEEEEe
Confidence 99999 99999999999999999998877765
No 7
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=2.1e-61 Score=563.91 Aligned_cols=620 Identities=18% Similarity=0.243 Sum_probs=122.3
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..+|.|...+..+.+.+|++|+|.|.+.+ .+.|++.+.......+..+....+ ..+.++|+|.+++.+|+|.|+|
T Consensus 29 ~~~p~l~~~~~~~~v~~G~~vtL~C~~~~----~v~W~~~~~~~~~~~~~~~~~~~~-~~~~~~l~I~~~~~~d~G~Y~C 103 (772)
T 3v2a_R 29 LDLPRLSIQKDILTIKANTTLQITCRGQR----DLDWLWPNNQSGSEQRVEVTECSD-GLFCKTLTIPKVIGNDTGAYKC 103 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCEECCCCCeEEEcCCCCEEEEEeccC----CeeeeCCCCCCccCCceeEEEcCC-CcEEEEEEECCCcHhhCEeEEE
Confidence 35677777778899999999999999753 589988776544333433332111 1234679999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCcee---cCCCceEeccC--CcEEEEEEEeccCCCeEEEeEC--CEEccc-ceEEE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSIL---EPLHDVSITEG--ESAVLSVQVGGEPSPKVEWYKD--GKLIKD-RQITS 161 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~---~~~~~~~~~~G--~~v~l~C~~~g~p~~~v~W~~~--g~~~~~-~~~~~ 161 (785)
.+.+. .....+.|.|. .+..|.+. ..+..+.+.+| +.++|.|.+.+ |.+.+.|+++ |..+.. .....
T Consensus 104 ~~~~~--~~~~~~~v~v~--~~~~~~~~~~~~~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~~~~ 178 (772)
T 3v2a_R 104 FYRET--DLASVIYVYVQ--DYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRIS 178 (772)
T ss_dssp --------------------------------CEEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSSSCE
T ss_pred EEcCC--CEEEEEEEEEC--CCCCCceEcCcccceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCceee
Confidence 99832 22333344443 22334332 22345678889 89999999976 7789999997 655433 22111
Q ss_pred eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE-EEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCee-e
Q psy2775 162 EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSI-L 239 (785)
Q Consensus 162 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~ 239 (785)
......|.|.+++.+|+|.|+|.+.+........ ..+.+... .+|.+ +
T Consensus 179 ~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~------------------------------~~~~v~~ 228 (772)
T 3v2a_R 179 WDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGY------------------------------RIYDVVL 228 (772)
T ss_dssp EETTTEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECC------------------------------CEEEEEE
T ss_pred cCCCCCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEecC------------------------------ccceeee
Confidence 2233469999999999999999999875543332 33333321 11222 3
Q ss_pred ecCCcceeCCCCeEEEEEEEcc--CCCCeEEEEECCEEcccceE-----------EEeCCEEEEEEccCCCCCCeEEEEE
Q psy2775 240 EPLHDVSITEGESAVLSVQVGG--EPSPKVEWYKDGKLIKDRQI-----------TSEKNTHTLTLIQCSTKDKGRYSVK 306 (785)
Q Consensus 240 ~~~~~~~~~~G~~~~l~C~~~g--~p~~~v~W~~~~~~l~~~~~-----------~~~~~~~~l~i~~~~~~d~G~Y~C~ 306 (785)
.+.....+.+|+.++|.|.+.+ .|.+.+.|++++..+..... ........|.|.+++.+|+|.|+|.
T Consensus 229 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 308 (772)
T 3v2a_R 229 SPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCA 308 (772)
T ss_dssp ECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEE
T ss_pred CCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEE
Confidence 3333467889999999999987 45678999999887552111 1122356899999999999999999
Q ss_pred EEeCCCceEEEEEEEEeccccceeee--ccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEE
Q psy2775 307 VTNKEGTVESAANLNVDQGKAEFIKK--LDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKL 383 (785)
Q Consensus 307 ~~n~~g~~~~~~~l~v~~~~~~~~~~--~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l 383 (785)
+.|..+.....+.|.|...|...... .....+.+|+.++|.|.+.+ |.+.+.|+++|..+....... ....|
T Consensus 309 ~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~-----~~~~L 383 (772)
T 3v2a_R 309 ASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIK-----AGHVL 383 (772)
T ss_dssp EECSSCEEEEEEEEEEECCCC-----------------------------------------------------------
T ss_pred EEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEc-----cceeE
Confidence 99998888888889988744332221 23567889999999999988 678999999999887543322 12349
Q ss_pred EEcCCCCCCceEEEEEEeccceEE------EEEEEecCCcccccC---CCeEEecCCcEEEEEEEeC-CCce-EEEEECC
Q psy2775 384 LIRNISVHDEGEYTCSLPDQETSA------ELNVVELPPEISVPL---QDVKVSRDEKASFEIELTK-GDAL-VKWYKDG 452 (785)
Q Consensus 384 ~i~~~~~~d~G~Y~C~a~n~~~~~------~~~v~~~~~~~~~~~---~~~~v~~g~~~~l~C~~~~-~~~~-i~W~~~~ 452 (785)
.|.++..+|+|.|+|.|.|..+.. .+.|. .+|.+.... ....+.+|+.++|.|.+.+ +.|. +.|++++
T Consensus 384 ~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~-~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~ 462 (772)
T 3v2a_R 384 TIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVY-VPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQL 462 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCChhcCceEEEEEEECCcCeEEEEEEEEEEe-cCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcC
Confidence 999999999999999999875532 22333 344443221 1123778999999999988 6665 9999974
Q ss_pred EE--------------------------------cccC-CCEEEEEe--CcEEEEEEccCCCCCcEEEEEEEeec-Ccce
Q psy2775 453 KE--------------------------------IAFS-ENVTLSID--GKKQKLIIFSAGLEDAGEYSCRVGDT-GDKE 496 (785)
Q Consensus 453 ~~--------------------------------~~~~-~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~ 496 (785)
.. +... .+..+..+ ...+.|.|.++ +|+|.|+|.|.|. |...
T Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~ 540 (772)
T 3v2a_R 463 EEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGE 540 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccccccccccccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccc
Confidence 32 1100 01111111 12356777776 7899999999998 8778
Q ss_pred eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeE
Q psy2775 497 SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTI 576 (785)
Q Consensus 497 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v 576 (785)
..+.|.|..++ .+...+ ...+.+|+.+
T Consensus 541 ~~~~l~V~~~p----------------------------------------------------~i~~~p-~~~~~~G~~v 567 (772)
T 3v2a_R 541 RVISFHVTRGP----------------------------------------------------EITLQP-DMQPTEQESV 567 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEEEEECCc----------------------------------------------------eeeccC-CcccccCCce
Confidence 88888887642 111111 2347789999
Q ss_pred EEEEEEecCCCCceEEEeCCEEecCCCCeeEE--------------------eeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 577 RLMAKVKASPAPSIVWFRNNKPLLSSPKKREI--------------------FDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 577 ~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~--------------------~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
+|.|.+.|.|.|.|.|+|+|..+......... ..+...+|.|.++.. +|+|.|+|.|.|
T Consensus 568 ~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n 646 (772)
T 3v2a_R 568 SLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASL-QDQGDYVCLAQD 646 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCc-cCCcEEEEEEEe
Confidence 99999999999999999998776443221111 112245699999999 999999999999
Q ss_pred CCcceEEE--EEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeEEE
Q psy2775 637 ELGSATHG--ARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKI 714 (785)
Q Consensus 637 ~~g~~~~~--~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l 714 (785)
..|....+ ..|.|. +..+|.+.. ......+..|++++|
T Consensus 647 ~~~~~~~s~~~~l~v~---------------------------------------~~~~P~~~~-~~~~~~v~~g~~~~l 686 (772)
T 3v2a_R 647 RKTKKRHCVVRQLTVL---------------------------------------ERVAPTITG-NLENQTTSIGESIEV 686 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCeEEEEEEeeccc---------------------------------------ccCCCEeec-CCCceEEeCCCCEEE
Confidence 76654433 344443 225677654 344567889999999
Q ss_pred EEEEecCCCCceEEeECCEEeeeccccccchhhhcccccceeeeeeceEEEEEEeccc
Q psy2775 715 EVRFKALPPPKAEWTVNGTVIVPSKRVKGKAEFIKKLDDLEVKERENAVLEVEVTSDK 772 (785)
Q Consensus 715 ~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~c~~~~~~ 772 (785)
.|.+.|.|.|.|+|+|||..+..+.++.+... ...|.+..+...|+|.|+|.+.+..
T Consensus 687 ~C~~~g~P~p~v~W~k~g~~l~~~~~~~~~~~-~~~L~I~~v~~~D~G~Y~C~a~N~~ 743 (772)
T 3v2a_R 687 SCTASGNPPPQIMWFKDNETLVEDSGIVLKDG-NRNLTIRRVRKEDEGLYTCQACSVL 743 (772)
T ss_dssp ----------------------------------------------------------
T ss_pred EEEeCccCCCeEEEEECCeECcCCCCeEEcCC-CcEEEECcCCHHHCEEEEEEEEeCC
Confidence 99999999999999999999988876655432 2479999999999999999998743
No 8
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=8.2e-56 Score=516.73 Aligned_cols=533 Identities=20% Similarity=0.281 Sum_probs=124.0
Q ss_pred ecCCceEecCC--CeEEEEEEEEecCCCeeEEEEC--CEEccCCC-CEEEeecCCccceEEEEEEcccCCCCCeEEEEEE
Q psy2775 17 KKTKPVYAEEN--SEVTLEVRLVAVPEPDLLWYYN--GEPLQETD-EVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVA 91 (785)
Q Consensus 17 ~~~~~~~v~~G--~~v~l~C~~~g~p~~~i~W~~~--~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 91 (785)
..+..+.+.+| ++++|.|.+.+ |.+.+.|+++ +..+.... ..... .. ..|.|.+++.+|+|.|+|.+
T Consensus 131 ~~~~~~~v~~G~~~~v~L~C~~~~-p~~~v~w~~~~~~~~~~~~~~~~~~~-~~------~~l~i~~~~~~d~G~Y~C~~ 202 (772)
T 3v2a_R 131 DQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWD-SK------KGFTIPSYMISYAGMVFCEA 202 (772)
T ss_dssp -CEEEEEEESSCCCEEEECCCCSC-SSCCEEEEEETTTEEECCCSSSCEEE-TT------TEEEEEGGGTTTCSEEEEEE
T ss_pred ccceeEEEecCCCCeEEEEccCCC-CCcEEEEEecCCCccccCCCceeecC-CC------CCeEecCCChhhCeEEEEEE
Confidence 34567889999 99999999976 7789999997 65544332 22222 11 23999999999999999999
Q ss_pred EcCCeeEEEE-eeEEEeCCCCCCCceec-CCCceEeccCCcEEEEEEEec--cCCCeEEEeECCEEcccceEE-------
Q psy2775 92 KNREGEAKMD-IPVKVNTGKPEKPSILE-PLHDVSITEGESAVLSVQVGG--EPSPKVEWYKDGKLIKDRQIT------- 160 (785)
Q Consensus 92 ~~~~~~~~~~-~~v~v~~~~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g--~p~~~v~W~~~g~~~~~~~~~------- 160 (785)
.+........ ..+.+.. ..+|.+.. +.....+.+|+.+.|.|.+.+ .+.+.+.|++++..+......
T Consensus 203 ~~~~~~~~s~~~~~~v~~--~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~ 280 (772)
T 3v2a_R 203 KINDESYQSIMYIVVVVG--YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ 280 (772)
T ss_dssp EETTEEEECCEEEEEEEC--CCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC---
T ss_pred EECCceEEEEEEEEEEec--CccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeecccccc
Confidence 9865543332 2333321 22333333 444578999999999999987 445689999998876543211
Q ss_pred ----EeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCC
Q psy2775 161 ----SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKP 236 (785)
Q Consensus 161 ----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 236 (785)
......+|.|.+++.+|+|.|+|.|.|..+..+..+.|.|...+
T Consensus 281 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p-------------------------------- 328 (772)
T 3v2a_R 281 SGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKP-------------------------------- 328 (772)
T ss_dssp --CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCC--------------------------------
T ss_pred ccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCC--------------------------------
Confidence 12235689999999999999999999999988888888887432
Q ss_pred eeee---cCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCc
Q psy2775 237 SILE---PLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGT 313 (785)
Q Consensus 237 ~~~~---~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 313 (785)
.+.. ......+.+|+.+.|.|.+.++|.+.+.|+++|..+....... ....|.|.++..+|+|.|+|.|.|..|.
T Consensus 329 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~g~~l~~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 406 (772)
T 3v2a_R 329 FVAFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIK--AGHVLTIMEVSERDTGNYTVILTNPISK 406 (772)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred eeEeccCCCCcEEEcCCCcEEEEEEEeeeCCCeEEEEECCEeCCCCceEc--cceeEEEecCChhcCceEEEEEEECCcC
Confidence 1111 1234567899999999999999999999999998876422111 3468999999999999999999999886
Q ss_pred eEE--EEEEEEeccccceeee--ccceeEeeCccEEEEEEEcC-CCCe-EEEEECCEE----------------------
Q psy2775 314 VES--AANLNVDQGKAEFIKK--LDDLEVKERENAVLEVEVTS-DKAD-VKWFKDGQE---------------------- 365 (785)
Q Consensus 314 ~~~--~~~l~v~~~~~~~~~~--~~~~~~~~g~~~~l~C~~~~-~~~~-v~W~~~~~~---------------------- 365 (785)
... .+.|.|..+|...... .....+.+|+.++|.|.+.+ |.+. ++|++++..
T Consensus 407 ~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (772)
T 3v2a_R 407 EKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWR 486 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEEEEEEecCCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCccccccccccccccCcCcccccc
Confidence 543 4566666433322111 11124789999999999987 5665 999986432
Q ss_pred ----------cCCCC-cEEEEE--cCcEEEEEEcCCCCCCceEEEEEEeccceEEE----EEEEecCCcccccCCCeEEe
Q psy2775 366 ----------IKTSK-KVTIEK--KGTIRKLLIRNISVHDEGEYTCSLPDQETSAE----LNVVELPPEISVPLQDVKVS 428 (785)
Q Consensus 366 ----------l~~~~-~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~----~~v~~~~~~~~~~~~~~~v~ 428 (785)
+.... +..... ......|.|.++ +|+|.|+|.|.|..+... +.|.. +|.+...+. ..+.
T Consensus 487 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~-~p~i~~~p~-~~~~ 562 (772)
T 3v2a_R 487 SVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTR-GPEITLQPD-MQPT 562 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEEC-CceeeccCC-cccc
Confidence 11101 111111 112245777776 689999999998766443 33333 444444433 3477
Q ss_pred cCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEE--------------------EEeCcEEEEEEccCCCCCcEEEEE
Q psy2775 429 RDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTL--------------------SIDGKKQKLIIFSAGLEDAGEYSC 487 (785)
Q Consensus 429 ~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~--------------------~~~~~~~~L~i~~~~~~d~G~Y~C 487 (785)
+|+.+.|.|.+.+ +.+.+.|++++..+........ ........|+|.+++.+|+|.|+|
T Consensus 563 ~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 642 (772)
T 3v2a_R 563 EQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVC 642 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEE
Confidence 9999999999988 6788999999876543322111 111123569999999999999999
Q ss_pred EEeec-Cccee--EEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeee
Q psy2775 488 RVGDT-GDKES--KATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIER 564 (785)
Q Consensus 488 ~a~n~-g~~~~--~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~ 564 (785)
.|.|. +.... ...|.|.... +|.|...
T Consensus 643 ~a~n~~~~~~~s~~~~l~v~~~~--------------------------------------------------~P~~~~~ 672 (772)
T 3v2a_R 643 LAQDRKTKKRHCVVRQLTVLERV--------------------------------------------------APTITGN 672 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEeCCCCeEEEEEEeecccccC--------------------------------------------------CCEeecC
Confidence 99995 44332 3455553221 2666666
Q ss_pred eeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEE
Q psy2775 565 FEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHG 644 (785)
Q Consensus 565 ~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~ 644 (785)
+.+..+.+|++++|.|.+.|.|.|.|+|+|+|.++..+.+. ....+..+|.|.++.. +|+|.|+|.|.|..|....+
T Consensus 673 ~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~~~~--~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~~~~~ 749 (772)
T 3v2a_R 673 LENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGI--VLKDGNRNLTIRRVRK-EDEGLYTCQACSVLGCAKVE 749 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCCCCe--EEcCCCcEEEECcCCH-HHCEEEEEEEEeCCcceeEE
Confidence 66788999999999999999999999999999999776543 2334456899999999 99999999999999999999
Q ss_pred EEEEEE
Q psy2775 645 ARVTVD 650 (785)
Q Consensus 645 ~~l~V~ 650 (785)
+.|.|+
T Consensus 750 ~~l~V~ 755 (772)
T 3v2a_R 750 AFFIIE 755 (772)
T ss_dssp ------
T ss_pred EEEEEE
Confidence 999887
No 9
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=2.2e-50 Score=447.77 Aligned_cols=452 Identities=13% Similarity=0.129 Sum_probs=312.2
Q ss_pred EcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEEEEEc
Q psy2775 92 KNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLI 171 (785)
Q Consensus 92 ~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L~i~ 171 (785)
.+..|.....+.|.|. .||.|........+.+|+.+.|.|.+.+ .++|+++|..+. ......+|.|.
T Consensus 19 ~~~~g~~~~~i~l~v~----~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~-----~~~~~~~L~I~ 85 (524)
T 2ec8_A 19 RVQTGSSQPSVSPGEP----SPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDET-----NENKQNEWITE 85 (524)
T ss_dssp --------------CC----CCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCC-----EEECSSEEEES
T ss_pred hhhcCCCCCeEEcCCC----CCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc-----ccCccceEEEc
Confidence 3444445555666665 6888887778889999999999999876 899999998772 23345689999
Q ss_pred ccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCC
Q psy2775 172 QCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGE 251 (785)
Q Consensus 172 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~ 251 (785)
+++.+|+|.|+|.|.| |. +..+.|.|... |.+...+....+.+|+
T Consensus 86 ~~~~~D~G~Y~C~a~n--g~-~~~~~l~V~~p--------------------------------~~~~~~~~~~~v~~G~ 130 (524)
T 2ec8_A 86 KAEATNTGKYTCTNKH--GL-SNSIYVFVRDP--------------------------------AKLFLVDRSLYGKEDN 130 (524)
T ss_dssp SCCSTTCEEEEEEETT--SC-EEEEEEECCCS--------------------------------SCSBCCCCCCCEETTS
T ss_pred ccchhhCEEEEEeecC--Cc-ceEEEEEECCC--------------------------------CcccccccceEEEcCC
Confidence 9999999999999998 43 56677777532 2222344466788999
Q ss_pred eEEEEEEEccCCCCeEEEEE-CCEEcccceEEEeCCEEEEEEccCCCCCCe-EEEEEEEeCCCceEE-EEEEEEe---cc
Q psy2775 252 SAVLSVQVGGEPSPKVEWYK-DGKLIKDRQITSEKNTHTLTLIQCSTKDKG-RYSVKVTNKEGTVES-AANLNVD---QG 325 (785)
Q Consensus 252 ~~~l~C~~~g~p~~~v~W~~-~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~~~n~~g~~~~-~~~l~v~---~~ 325 (785)
.+.|.|.+.+.|.+.+.|++ +|..+.............|.|.++..+|+| .|+|.|.|..+...+ .+.|.|. ..
T Consensus 131 ~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~ 210 (524)
T 2ec8_A 131 DTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKA 210 (524)
T ss_dssp CEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCS
T ss_pred eEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCC
Confidence 99999999987778999998 787776322221122337999999999999 999999998765533 5778776 35
Q ss_pred ccceeeeccceeEeeCccEEEEEEEcC-CCCe-EEEEECCEEc--CCCCcEEEEE---cCcEEEEEEcCCCCCCceEEEE
Q psy2775 326 KAEFIKKLDDLEVKERENAVLEVEVTS-DKAD-VKWFKDGQEI--KTSKKVTIEK---KGTIRKLLIRNISVHDEGEYTC 398 (785)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-v~W~~~~~~l--~~~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y~C 398 (785)
+|.+...+....+.+|+.+.|.|.+.+ +.+. ++|++++..+ .......+.. ......|.|.++..+|+|.|+|
T Consensus 211 ~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 290 (524)
T 2ec8_A 211 VPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMC 290 (524)
T ss_dssp CCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEE
T ss_pred CCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEE
Confidence 666666667778999999999999987 4454 9999999874 2222222211 1123569999999999999999
Q ss_pred EEeccceEE----EEEEEecCCcccccC---CCeEEecCCcEEEEEEEeC-CCce-EEEEECCEEcccCC-CEEEEEeC-
Q psy2775 399 SLPDQETSA----ELNVVELPPEISVPL---QDVKVSRDEKASFEIELTK-GDAL-VKWYKDGKEIAFSE-NVTLSIDG- 467 (785)
Q Consensus 399 ~a~n~~~~~----~~~v~~~~~~~~~~~---~~~~v~~g~~~~l~C~~~~-~~~~-i~W~~~~~~~~~~~-~~~~~~~~- 467 (785)
.|.|..+.. .+.|. .+|.+...+ ....+.+|+.++|.|.+.+ |.|. +.|+++|..+.... ++....++
T Consensus 291 ~a~n~~g~~~~~~~l~V~-~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~ 369 (524)
T 2ec8_A 291 YANNTFGSANVTTTLEVV-DKGFINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENES 369 (524)
T ss_dssp EEECSSCEEEEEEEEEEE-SSCEEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCCSSS
T ss_pred EEEecCCceEEEEEEEEe-ccCceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEccCC
Confidence 999865543 33444 345554433 3677899999999999988 7778 99999999886654 33322222
Q ss_pred ---cEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEee
Q psy2775 468 ---KKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLN 543 (785)
Q Consensus 468 ---~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~ 543 (785)
....|.|.+++.+|+|.|+|.|.|. |....++.|.|..+
T Consensus 370 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~------------------------------------- 412 (524)
T 2ec8_A 370 NIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTK------------------------------------- 412 (524)
T ss_dssp CCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEE-------------------------------------
T ss_pred CceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecC-------------------------------------
Confidence 3578999999999999999999998 88888888888765
Q ss_pred cccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecC--------CCCeeEE--eeCCe
Q psy2775 544 LFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLS--------SPKKREI--FDGEN 613 (785)
Q Consensus 544 ~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~--------~~~~~~~--~~~~~ 613 (785)
|.+..... +.+| +|.|.+.|+|.|.|+|+|++..+.. +...... ...+.
T Consensus 413 ---------------P~i~~~~~---~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 471 (524)
T 2ec8_A 413 ---------------PEILTYDR---LVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGK 471 (524)
T ss_dssp ---------------EEEEEEEC---CSSS---CEEEEEEEESCCEEECCCC----------CCCCCCCCCCC-CCSSSC
T ss_pred ---------------CeEeeccc---CcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCc
Confidence 33333222 3455 9999999999999999999876521 1111111 11222
Q ss_pred E-E-EEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 614 I-I-LELKEADSETDAGDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 614 ~-~-L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
. . +.+..... +|+|.|+|.|.|..|....++.|.|+.
T Consensus 472 ~~~~s~l~~~~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~e 510 (524)
T 2ec8_A 472 LVVQSSIDSSAF-KHNGTVECKAYNDVGKTSAYFNFAFKG 510 (524)
T ss_dssp EEEEEEECCCSC-CC-----CEEECSSCEEECCCCCCC--
T ss_pred ceEEEEEEEEEc-cCCEEEEEEEEcCCCceEEEEEEEEec
Confidence 1 1 22444445 899999999999999999999888873
No 10
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=7.6e-49 Score=435.38 Aligned_cols=423 Identities=17% Similarity=0.218 Sum_probs=310.0
Q ss_pred CCCeeeecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCc
Q psy2775 234 EKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGT 313 (785)
Q Consensus 234 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 313 (785)
.+|.+...+....+.+|+.++|.|.+.+ .+.|++++..+. .......|.|.+++.+|+|.|+|.+.| |.
T Consensus 35 ~pP~i~~~~~~~~v~~G~~v~l~C~~~~----~v~W~~~~~~~~-----~~~~~~~L~I~~~~~~D~G~Y~C~a~n--g~ 103 (524)
T 2ec8_A 35 SPPSIHPGKSDLIVRVGDEIRLLCTDPG----FVKWTFEILDET-----NENKQNEWITEKAEATNTGKYTCTNKH--GL 103 (524)
T ss_dssp CCCEEESCCSEEECCTTSCEEEEEECTT----EEEEEEESSSCC-----EEECSSEEEESSCCSTTCEEEEEEETT--SC
T ss_pred CCCccCCCCceEEEeCCCeEEEEEeCCc----eEEEcCCCcccc-----ccCccceEEEcccchhhCEEEEEeecC--Cc
Confidence 5577777777788999999999999976 999999998762 223456899999999999999999999 43
Q ss_pred eEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcCCC-CeEEEEE-CCEEcCCCCcEEEEEcCcEEEEEEcCCCCC
Q psy2775 314 VESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTSDK-ADVKWFK-DGQEIKTSKKVTIEKKGTIRKLLIRNISVH 391 (785)
Q Consensus 314 ~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~-~~v~W~~-~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~ 391 (785)
..++.|.|..++..+ ..+....+.+|+.+.|.|.+.+++ +.++|++ +|..+..+.++.....+. |.|.++..+
T Consensus 104 -~~~~~l~V~~p~~~~-~~~~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~---L~i~~~~~~ 178 (524)
T 2ec8_A 104 -SNSIYVFVRDPAKLF-LVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAG---IMIKSVKRA 178 (524)
T ss_dssp -EEEEEEECCCSSCSB-CCCCCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTE---EEEESCCGG
T ss_pred -ceEEEEEECCCCccc-ccccceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCcc---EEEeccchh
Confidence 667788887644444 556677889999999999999865 8999988 888887766766655554 999999999
Q ss_pred Cce-EEEEEEeccce-----EEEEEEE---ecCCcccccCCCeEEecCCcEEEEEEEeC-CCce-EEEEECCEEc--ccC
Q psy2775 392 DEG-EYTCSLPDQET-----SAELNVV---ELPPEISVPLQDVKVSRDEKASFEIELTK-GDAL-VKWYKDGKEI--AFS 458 (785)
Q Consensus 392 d~G-~Y~C~a~n~~~-----~~~~~v~---~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~-i~W~~~~~~~--~~~ 458 (785)
|+| .|+|.|.|..+ ...+.|. ..+|.+...+....+.+|+.++|.|.+.+ +.+. +.|++++..+ ...
T Consensus 179 d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~ 258 (524)
T 2ec8_A 179 YHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEK 258 (524)
T ss_dssp GTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEE
T ss_pred hCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccc
Confidence 999 99999987543 3445554 36788877777888999999999999998 5555 9999999873 322
Q ss_pred CCEEEE---EeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecC
Q psy2775 459 ENVTLS---IDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSS 534 (785)
Q Consensus 459 ~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (785)
....+. .......|.|.+++.+|+|.|+|.|.|. |.....+.|.|..+|
T Consensus 259 ~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p--------------------------- 311 (524)
T 2ec8_A 259 YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKG--------------------------- 311 (524)
T ss_dssp EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSC---------------------------
T ss_pred cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccC---------------------------
Confidence 222222 1123468999999999999999999998 888888999998763
Q ss_pred CceeeEEeecccccccCCCCCCCCCeEeee---eeeeeeeecCeEEEEEEEecCCCCc-eEEEeCCEEecCCCCeeEEee
Q psy2775 535 PDIQVKWLNLFIVPTCPLGSPGQAPLFIER---FEEKTVKEKGTIRLMAKVKASPAPS-IVWFRNNKPLLSSPKKREIFD 610 (785)
Q Consensus 535 ~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~---~~~~~v~~g~~v~l~C~~~g~P~p~-v~W~~~~~~i~~~~~~~~~~~ 610 (785)
.+... .....+.+|+.++|.|.+.|+|.|. |+|+|+|..+...........
T Consensus 312 -------------------------~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~~~~~~~~~ 366 (524)
T 2ec8_A 312 -------------------------FINIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSE 366 (524)
T ss_dssp -------------------------EEEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSSBCCEESCC
T ss_pred -------------------------ceEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCCccceeEEc
Confidence 22211 1356889999999999999999999 999999999876653333332
Q ss_pred C-----CeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeee
Q psy2775 611 G-----ENIILELKEADSETDAGDYKVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVD 685 (785)
Q Consensus 611 ~-----~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (785)
. ...+|.|.++.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 367 ~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~g~~~~~~~l~V~----------------------------------- 410 (524)
T 2ec8_A 367 NESNIRYVSELHLTRLKG-TEGGTYTFLVSNSDVNAAIAFNVYVN----------------------------------- 410 (524)
T ss_dssp SSSCCEEEEEEEECSCCG-GGCEEEEEEEECSSCEEEEEEEEEEC-----------------------------------
T ss_pred cCCCceeEEEEEEeecCc-ccCeEEEEEEEecCceEEEEEEEEEe-----------------------------------
Confidence 2 357899999999 99999999999999998888888876
Q ss_pred ecCccccCCCcCCCCCCcEEeecCCeEEEEEEEecCCCCceEEeECCEEeee-------cccccc-c-hhhhccccc---
Q psy2775 686 VEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRFKALPPPKAEWTVNGTVIVP-------SKRVKG-K-AEFIKKLDD--- 753 (785)
Q Consensus 686 ~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~-------~~~~~~-~-~~~~~~l~~--- 753 (785)
.+|.+..... +..| +|.|.+.|.|.|.|+|+++|..+.. .+.... . ......+.+
T Consensus 411 ------~~P~i~~~~~----~~~g---~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~ 477 (524)
T 2ec8_A 411 ------TKPEILTYDR----LVNG---MLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSS 477 (524)
T ss_dssp ------EEEEEEEEEC----CSSS---CEEEEEEEESCCEEECCCC----------CCCCCCCCCCC-CCSSSCEEEEEE
T ss_pred ------cCCeEeeccc----CcCc---EEEEEEEeecCCEEEEEECCCcccccccccCCCCceeeeeccCCCCcceEEEE
Confidence 3444432111 3345 9999999999999999999877631 111110 0 000011111
Q ss_pred ceee-eeeceEEEEEEecccc
Q psy2775 754 LEVK-ERENAVLEVEVTSDKA 773 (785)
Q Consensus 754 ~~v~-~~~~~~~~c~~~~~~~ 773 (785)
..+. ..|.|.|+|.+.+..+
T Consensus 478 l~~~~~~d~G~Y~C~a~N~~G 498 (524)
T 2ec8_A 478 IDSSAFKHNGTVECKAYNDVG 498 (524)
T ss_dssp ECCCSCCC-----CEEECSSC
T ss_pred EEEEEccCCEEEEEEEEcCCC
Confidence 2222 4899999999987443
No 11
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2.8e-46 Score=421.15 Aligned_cols=439 Identities=15% Similarity=0.183 Sum_probs=324.1
Q ss_pred CCceEeccCCcEEEEEEEeccCCC---eEEEeECCEEcc---------------cceEE--E--eCCEEEEEEcccCCCC
Q psy2775 120 LHDVSITEGESAVLSVQVGGEPSP---KVEWYKDGKLIK---------------DRQIT--S--EKNTHTLTLIQCSTKD 177 (785)
Q Consensus 120 ~~~~~~~~G~~v~l~C~~~g~p~~---~v~W~~~g~~~~---------------~~~~~--~--~~~~~~L~i~~~~~~d 177 (785)
+..+.+.+|+.+.|.|.+.+.|.+ .+.|+|++..+. ..... . ..+..+|.|.+++.+|
T Consensus 7 P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D 86 (585)
T 2ocw_A 7 PEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDD 86 (585)
T ss_pred cceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCccc
Confidence 456788999999999999887643 899999885321 01111 1 2345689999999999
Q ss_pred cEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEE
Q psy2775 178 KGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSV 257 (785)
Q Consensus 178 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C 257 (785)
+|.|+|.|.|..+..+..+.|.|.. +|.+...+....+.+|+.+.|.|
T Consensus 87 ~G~Y~C~~~n~~~~~~~~~~l~V~~--------------------------------~p~~~~~~~~~~v~~G~~v~l~C 134 (585)
T 2ocw_A 87 SGRYKCGLGINSRGLSFDVSLEVSQ--------------------------------GPGLLNDTKVYTVDLGRTVTINC 134 (585)
T ss_pred CEEEEEEcccCCCCceEEEEEEEec--------------------------------CccccCCCccEEEEcCCCEEEEE
Confidence 9999999999888877778888863 34555556677889999999999
Q ss_pred EEccC-CCCeEEEEECCEEcc--------------cc--eEEEeC---CEEEEEEccCCCCCCeEEEEEEEeCCCceEEE
Q psy2775 258 QVGGE-PSPKVEWYKDGKLIK--------------DR--QITSEK---NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA 317 (785)
Q Consensus 258 ~~~g~-p~~~v~W~~~~~~l~--------------~~--~~~~~~---~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 317 (785)
.+.+. |++.+.|++++.... .. .+...+ +...|.|.+++.+|+|.|+|.|.|..|.....
T Consensus 135 ~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~ 214 (585)
T 2ocw_A 135 PFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKN 214 (585)
T ss_pred EecCCCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccce
Confidence 99865 456899999875321 01 111111 23479999999999999999999999988888
Q ss_pred EEEEEeccccceeeeccceeEeeCccEEEEEEEcCCC---CeEEEE-ECCEE----cC--------CCCcEEEEEc--Cc
Q psy2775 318 ANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTSDK---ADVKWF-KDGQE----IK--------TSKKVTIEKK--GT 379 (785)
Q Consensus 318 ~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~---~~v~W~-~~~~~----l~--------~~~~~~~~~~--~~ 379 (785)
+.|.|...++. ...+.+|+.+.|.|.+..+. +.+.|+ ++|.. +. ...++.+... ..
T Consensus 215 ~~l~V~~~~p~------~~~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 288 (585)
T 2ocw_A 215 ADLQVLKPEPE------LVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDG 288 (585)
T ss_pred EEEEEccCCCc------eeEEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCc
Confidence 89988865433 34577899999999986654 688886 77732 11 1224444332 23
Q ss_pred EEEEEEcCCCCCCceEEEEEEeccc--------eEEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeC-CCceE----
Q psy2775 380 IRKLLIRNISVHDEGEYTCSLPDQE--------TSAELNVVELPPEISVPLQDVKVSRDEKASFEIELTK-GDALV---- 446 (785)
Q Consensus 380 ~~~l~i~~~~~~d~G~Y~C~a~n~~--------~~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i---- 446 (785)
...|.|.++..+|+|.|+|.|.|.. ....+.|. .+|.+...+....+.+|+.+.|.|.+.+ +.+.+
T Consensus 289 ~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~-~~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~ 367 (585)
T 2ocw_A 289 SFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVN-EESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWC 367 (585)
T ss_pred EEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEe-cccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEE
Confidence 3369999999999999999999842 23334444 4566666777888999999999999987 56655
Q ss_pred EEEE--CCE--Eccc---------CCCEEEEEe--CcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccc
Q psy2775 447 KWYK--DGK--EIAF---------SENVTLSID--GKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEF 510 (785)
Q Consensus 447 ~W~~--~~~--~~~~---------~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~ 510 (785)
+|++ +|. .+.. ..++.+..+ .....|+|.+++.+|+|.|+|.| |. |.....+.|.|..++
T Consensus 368 ~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~--- 443 (585)
T 2ocw_A 368 LWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGE--- 443 (585)
T ss_pred EEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCc---
Confidence 7999 886 4432 234444432 23456999999999999999999 76 877888889987643
Q ss_pred cccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEe----cCC
Q psy2775 511 LTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVK----ASP 586 (785)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~----g~P 586 (785)
|.+.. +....+.+|++++|.|.+. |.|
T Consensus 444 ------------------------------------------------p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p 474 (585)
T 2ocw_A 444 ------------------------------------------------PNLKV-PGNVTAVLGETLKVPCHFPCKFSSYE 474 (585)
T ss_pred ------------------------------------------------ccccc-CCceeEecCCcEEEEEEecCCCCCCc
Confidence 11111 2356789999999999997 778
Q ss_pred CCceEEEeCCEEecCCCCe-----eEEe--eCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEE-EEEEEEe
Q psy2775 587 APSIVWFRNNKPLLSSPKK-----REIF--DGENIILELKEADSETDAGDYKVVATNELGSATHG-ARVTVDV 651 (785)
Q Consensus 587 ~p~v~W~~~~~~i~~~~~~-----~~~~--~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~ 651 (785)
.|.|+|+|+|..+...... .+.. .+...+|+|.++.. +|+|.|+|.|.|..|..... +.|.|+.
T Consensus 475 ~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~~l~V~~ 546 (585)
T 2ocw_A 475 KYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTR-ADEGWYWCGVKQGHFYGETAAVYVAVEE 546 (585)
T ss_pred cEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCc-ccCeEEEEEeEeCCCccEEEEEEEEEEe
Confidence 8899999999887543221 1111 24457899999999 99999999999999976654 6777763
No 12
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=3.7e-46 Score=420.16 Aligned_cols=446 Identities=15% Similarity=0.224 Sum_probs=327.0
Q ss_pred eecCCceEecCCCeEEEEEEEEecCCC---eeEEEECCEEcc-----C---------CCCEEEeecCCccceEEEEEEcc
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVPEP---DLLWYYNGEPLQ-----E---------TDEVVFSDQSDMHSYVSIVTIKS 78 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p~~---~i~W~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~L~i~~ 78 (785)
+..|..+.+.+|++++|.|.+.+.|.+ .+.|+|++..+. . ..++.+.... .....+|+|.+
T Consensus 4 i~~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~g~~~L~I~~ 81 (585)
T 2ocw_A 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFP--ENGTFVVNIAQ 81 (585)
T ss_pred ccCcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecC--CCCEEEEEECC
Confidence 346788999999999999999887643 799999975321 1 1233333211 11225699999
Q ss_pred cCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCCeEEEeECCEEcc--
Q psy2775 79 IKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSPKVEWYKDGKLIK-- 155 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~~v~W~~~g~~~~-- 155 (785)
++.+|+|.|+|.|.|..+.....+.|.|. .+|.+...+....+.+|+.+.|.|.+.+. |.+.+.|++++....
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~----~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~ 157 (585)
T 2ocw_A 82 LSQDDSGRYKCGLGINSRGLSFDVSLEVS----QGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVL 157 (585)
T ss_pred CCcccCEEEEEEcccCCCCceEEEEEEEe----cCccccCCCccEEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceE
Confidence 99999999999999988877777888887 56778777788899999999999999864 456899999875421
Q ss_pred ------------cce--EEEeC---CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCc
Q psy2775 156 ------------DRQ--ITSEK---NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPY 218 (785)
Q Consensus 156 ------------~~~--~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~ 218 (785)
... +...+ +..+|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...+
T Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~-------------- 223 (585)
T 2ocw_A 158 VIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE-------------- 223 (585)
T ss_pred EecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC--------------
Confidence 011 11111 23479999999999999999999999988888888886432
Q ss_pred cccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCC---CeEEEE-ECCEEcc-------------cceE
Q psy2775 219 VVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPS---PKVEWY-KDGKLIK-------------DRQI 281 (785)
Q Consensus 219 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~---~~v~W~-~~~~~l~-------------~~~~ 281 (785)
|. ...+.+|+.+.|.|.+ +.+. +.+.|+ ++|.... ...+
T Consensus 224 -----------------p~------~~~~~~G~~v~l~C~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~ 279 (585)
T 2ocw_A 224 -----------------PE------LVYEDLRGSVTFHCAL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRI 279 (585)
T ss_pred -----------------Cc------eeEEcCCCcEEEEEEc-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCce
Confidence 11 2346789999999998 4443 678897 7773211 1111
Q ss_pred EEe----CCEEEEEEccCCCCCCeEEEEEEEeCCCceE----EEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-
Q psy2775 282 TSE----KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE----SAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS- 352 (785)
Q Consensus 282 ~~~----~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~----~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~- 352 (785)
... .+...|.|.++..+|+|.|+|.|.|..+... ..+.|.|.. ++.+...+....+.+|+.+.|.|.+.+
T Consensus 280 ~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~G~~v~l~C~~~~~ 358 (585)
T 2ocw_A 280 LLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNE-ESTIPRSPTVVKGVAGSSVAVLCPYNRK 358 (585)
T ss_pred EeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEec-ccccccCCcceEEEeCCcEEEEEecCCC
Confidence 111 3344899999999999999999999633331 677888886 445555567778899999999999987
Q ss_pred CCCeE----EEEE--CCE--EcCC---------CCcEEEEE--cCcEEEEEEcCCCCCCceEEEEEEeccce----EEEE
Q psy2775 353 DKADV----KWFK--DGQ--EIKT---------SKKVTIEK--KGTIRKLLIRNISVHDEGEYTCSLPDQET----SAEL 409 (785)
Q Consensus 353 ~~~~v----~W~~--~~~--~l~~---------~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~----~~~~ 409 (785)
+.+.+ +|++ +|. .+.. ..++.+.. ......|.|.++..+|+|.|+|.| |..+ ...+
T Consensus 359 p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l 437 (585)
T 2ocw_A 359 ESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEI 437 (585)
T ss_pred CCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEE
Confidence 55665 7999 886 4432 22444432 223345999999999999999999 6543 4556
Q ss_pred EEEecCCcccccCCCeEEecCCcEEEEEEEe----C-CCceEEEEECCEEcccCCC-------EEEEEeCcEEEEEEccC
Q psy2775 410 NVVELPPEISVPLQDVKVSRDEKASFEIELT----K-GDALVKWYKDGKEIAFSEN-------VTLSIDGKKQKLIIFSA 477 (785)
Q Consensus 410 ~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~----~-~~~~i~W~~~~~~~~~~~~-------~~~~~~~~~~~L~i~~~ 477 (785)
.|...+|.+.. +....+.+|+.++|.|.+. + +.+.|.|+++|..+..... ..+..++....|+|.++
T Consensus 438 ~V~~~~p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v 516 (585)
T 2ocw_A 438 KIIEGEPNLKV-PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLV 516 (585)
T ss_pred EEecCcccccc-CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCC
Confidence 66665666554 5677899999999999996 3 4667999999988754321 12222344579999999
Q ss_pred CCCCcEEEEEEEeec-Ccce-eEEEEEEEcCcc
Q psy2775 478 GLEDAGEYSCRVGDT-GDKE-SKATLTVEAPAV 508 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g~~~-~~~~l~V~~~~~ 508 (785)
..+|+|.|+|.|.|. |... ..+.|.|..++.
T Consensus 517 ~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p~ 549 (585)
T 2ocw_A 517 TRADEGWYWCGVKQGHFYGETAAVYVAVEERKA 549 (585)
T ss_pred CcccCeEEEEEeEeCCCccEEEEEEEEEEeeee
Confidence 999999999999998 6554 448999998863
No 13
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-47 Score=417.74 Aligned_cols=426 Identities=14% Similarity=0.165 Sum_probs=285.9
Q ss_pred ceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccce-EE-EeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEE
Q psy2775 122 DVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ-IT-SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLN 199 (785)
Q Consensus 122 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~-~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 199 (785)
.+++.+|+.++|.|.+.+.|...+.|++++..+.... +. ......+|.|.+++.+|+|.|+|.|.|..+.....+.|.
T Consensus 57 ~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~v~ 136 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVS 136 (527)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEE
T ss_pred eEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCCCcceEEEEEECcCChhhCeeEEEEEEeccccEEEEEEEE
Confidence 6889999999999999988888999999998765432 11 112345699999999999999999999988777767776
Q ss_pred eecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccc
Q psy2775 200 VDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR 279 (785)
Q Consensus 200 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~ 279 (785)
|.... +...........|+...|.|.+.|+|.|.|+|++++..+...
T Consensus 137 v~~~~---------------------------------~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~ 183 (527)
T 3qs9_E 137 IRNTL---------------------------------LYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESC 183 (527)
T ss_dssp EC--------------------------------------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------
T ss_pred ECCce---------------------------------eeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccc
Confidence 64110 001111122344667789999999999999999988765422
Q ss_pred eEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEE-EEEEEeccccceeeeccceeEeeCccEEEEEEEc-C-CCCe
Q psy2775 280 QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVT-S-DKAD 356 (785)
Q Consensus 280 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~-~~~~ 356 (785)
.. ............+..+|+|.|+|.|.|..|..... +.|.|...+.. .+....+.+|+.+.|.|.+. + |.+.
T Consensus 184 ~~-~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~---~p~~~~v~~G~~v~L~C~~~~g~p~p~ 259 (527)
T 3qs9_E 184 KE-ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFG 259 (527)
T ss_dssp -------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC---SCCEEEECTTSCEEEEEEEEESSSCCC
T ss_pred cc-cCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc---CCCceEEeCCCeEEEEEEEccCCCCeE
Confidence 11 11111122334456889999999999999887655 67777654332 44567889999999999996 5 6789
Q ss_pred EEEEECCEEcCCCCcEEEE--EcC----cEEEEEEcCCCCCCceEEEEEEecc-ceEEEEEEEecCCcccccC--CCeEE
Q psy2775 357 VKWFKDGQEIKTSKKVTIE--KKG----TIRKLLIRNISVHDEGEYTCSLPDQ-ETSAELNVVELPPEISVPL--QDVKV 427 (785)
Q Consensus 357 v~W~~~~~~l~~~~~~~~~--~~~----~~~~l~i~~~~~~d~G~Y~C~a~n~-~~~~~~~v~~~~~~~~~~~--~~~~v 427 (785)
++|+++|..+.....+... ..+ ....|.|.++..+|+|.|+|.|.|. .....+.|.. +|.+...+ ....+
T Consensus 260 i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~-~p~i~~~~~~~~~~v 338 (527)
T 3qs9_E 260 LTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVE-KGFINATNSSEDYEI 338 (527)
T ss_dssp EEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC---CEEECCCSCCEECC
T ss_pred EEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEc-cCccccccCcccEEE
Confidence 9999999887655433221 111 1245999999999999999999997 2233344443 33333322 34567
Q ss_pred ecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEc
Q psy2775 428 SRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEA 505 (785)
Q Consensus 428 ~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~ 505 (785)
.+|+.+.|.|.+.+ |.|.|+|+|+|..+....+... ....|.|.+++.+|+|.|+|.|.|. |....++.|.|..
T Consensus 339 ~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~----~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~ 414 (527)
T 3qs9_E 339 DQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRR 414 (527)
T ss_dssp CTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCS----SSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--C
T ss_pred cCCCeEEEEEEEEecCCCEEEEEECCEECcCCccccc----CCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 78999999999998 7889999999999866554221 2246999999999999999999998 7778888888886
Q ss_pred CcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC
Q psy2775 506 PAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS 585 (785)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~ 585 (785)
+ |.|.... .| .+|.|.+.|+
T Consensus 415 ~----------------------------------------------------P~i~~~~------~~--~~l~C~a~g~ 434 (527)
T 3qs9_E 415 K----------------------------------------------------PQVLAEA------SA--SQASCFSDGY 434 (527)
T ss_dssp C----------------------------------------------------CEEEECC------CC--E---EEEECS
T ss_pred C----------------------------------------------------CeEEEeC------CC--CEEEEEEEEE
Confidence 6 3333221 12 3589999999
Q ss_pred CCCceEEEeCCEEecCCCC-----------eeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 586 PAPSIVWFRNNKPLLSSPK-----------KREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 586 P~p~v~W~~~~~~i~~~~~-----------~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
|.|.|+|++++........ ...........++|.-... +|+|.|+|.|.|..|....++.|.|.
T Consensus 435 P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~-~d~G~Y~C~A~N~~G~~~~~~~L~V~ 509 (527)
T 3qs9_E 435 PLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEA-IKGFLVKCCAYNSLGTSCETILLNSP 509 (527)
T ss_dssp SCCEEEEECCC-----CCCCCCCCEEEC---------CEEEEECCCCCS-SCSCEEEEEEECSSCEEEEEEEC---
T ss_pred cCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEEEEEEEEc-CCCEEEEEEEEeCCCCceeEEEEecC
Confidence 9999999998765422111 0011111222333333334 79999999999999999998888775
No 14
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=4.4e-46 Score=413.12 Aligned_cols=445 Identities=16% Similarity=0.204 Sum_probs=309.2
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE--Ecc------------CCCCEEEeecCCccceEEEEEEcccC
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE--PLQ------------ETDEVVFSDQSDMHSYVSIVTIKSIK 80 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~--~~~------------~~~~~~~~~~~~~~~~~~~L~i~~~~ 80 (785)
+...|..+.+.+|++++|.|.+.+.|.+.+.|++++. .+. ...++.....+ ...+|+|.+++
T Consensus 3 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~ 78 (523)
T 2rcj_C 3 VLTQPPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSG----TSASLAISGLE 78 (523)
T ss_pred ccccCCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCC----CEEEEEECCCC
Confidence 3455778999999999999999988899999999752 110 01233322111 22569999999
Q ss_pred CCCCeEEEEEEEcCCee---EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCC--eEEEeECCEEcc
Q psy2775 81 KREEGVYTVVAKNREGE---AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSP--KVEWYKDGKLIK 155 (785)
Q Consensus 81 ~~D~G~Y~C~a~~~~~~---~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~--~v~W~~~g~~~~ 155 (785)
.+|+|.|+|.|.|..+. ....+.|.|......+|.+...+....+.+|+.+.|.|.+.|.|++ .|+|++||..+.
T Consensus 79 ~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 158 (523)
T 2rcj_C 79 AEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVK 158 (523)
T ss_pred hhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCC
Confidence 99999999999997653 2234567775433466777666666667789999999999987654 999999999886
Q ss_pred cceEEE-----eCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCcccccccee
Q psy2775 156 DRQITS-----EKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTL 226 (785)
Q Consensus 156 ~~~~~~-----~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (785)
...... .++ ...|.|.++..+|+|.|+|.|.|..+.....+.+.+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~----------------------- 215 (523)
T 2rcj_C 159 AGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSA----------------------- 215 (523)
T ss_pred CceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCC-----------------------
Confidence 543211 111 246999999999999999999999876555444332111
Q ss_pred eecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccC-CCC-eEEEEECCEEcccc---eEEEeCC----EEEEEEccCCC
Q psy2775 227 QVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYKDGKLIKDR---QITSEKN----THTLTLIQCST 297 (785)
Q Consensus 227 ~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~~-~v~W~~~~~~l~~~---~~~~~~~----~~~l~i~~~~~ 297 (785)
...+|.+........+.+|+.+.|.|.+.|. |.+ .|+|+++|..+... .....++ .+.|.|.++..
T Consensus 216 -----~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 290 (523)
T 2rcj_C 216 -----STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL 290 (523)
T ss_pred -----CCcCCEEEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhc
Confidence 0133455433334456789999999999886 777 89999999875421 1111112 35899999999
Q ss_pred CCCeEEEEEEEeCCCceEEEEEEEEeccccceeeecccee-EeeCccEEEEEEEcC-CC----CeEEEEECCEEcCCCCc
Q psy2775 298 KDKGRYSVKVTNKEGTVESAANLNVDQGKAEFIKKLDDLE-VKERENAVLEVEVTS-DK----ADVKWFKDGQEIKTSKK 371 (785)
Q Consensus 298 ~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~-~~~g~~~~l~C~~~~-~~----~~v~W~~~~~~l~~~~~ 371 (785)
+| |.|+|.|.|..|.......|.+...|..+...+.... +.+|+.+.|.|.+.+ ++ +.++|+++|..+.....
T Consensus 291 ~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~~~~ 369 (523)
T 2rcj_C 291 GT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHNAKT 369 (523)
T ss_pred CC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccCCcc
Confidence 99 9999999999998777777776654444343333333 788999999999987 32 48999999998875542
Q ss_pred EE--EEEcCc---EEEEEEcCCCCCCceEEEEEEeccceEEE----EEE---EecCCcccccCCCeEEecCCcEEEEEEE
Q psy2775 372 VT--IEKKGT---IRKLLIRNISVHDEGEYTCSLPDQETSAE----LNV---VELPPEISVPLQDVKVSRDEKASFEIEL 439 (785)
Q Consensus 372 ~~--~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~----~~v---~~~~~~~~~~~~~~~v~~g~~~~l~C~~ 439 (785)
.. ...++. .+.|.|.++..+|+|.|+|.|.|..+... +.+ ...+|.+...+.......|+.++|.|.+
T Consensus 370 ~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~~~~~~l~C~~ 449 (523)
T 2rcj_C 370 KPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLTCLV 449 (523)
T ss_pred CCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCCEEEEeCCChHHccCCceEEEEEE
Confidence 21 122222 24589999999999999999998654332 222 2345555443222222234459999999
Q ss_pred eC-CCc--eEEEEECCEEcccCCCEEE--EEeCc---EEEEEEccCCCCCcEEEEEEEeec
Q psy2775 440 TK-GDA--LVKWYKDGKEIAFSENVTL--SIDGK---KQKLIIFSAGLEDAGEYSCRVGDT 492 (785)
Q Consensus 440 ~~-~~~--~i~W~~~~~~~~~~~~~~~--~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~ 492 (785)
.+ +++ .++|+++|.++........ ..++. .+.|.+.....+|+|.|+|.|.|.
T Consensus 450 ~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~ 510 (523)
T 2rcj_C 450 KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHE 510 (523)
T ss_pred EeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcC
Confidence 98 444 8999999999864432222 22332 245667666678899999999996
No 15
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-46 Score=411.36 Aligned_cols=426 Identities=12% Similarity=0.100 Sum_probs=285.6
Q ss_pred ceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEEcCCeeEEE
Q psy2775 21 PVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAKNREGEAKM 100 (785)
Q Consensus 21 ~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~~~ 100 (785)
.++|.+|++++|.|.+.+.|...+.|++++..+.....+.. +. ....+|.|.+++.+|+|.|+|.|.|..+....
T Consensus 57 ~~~v~~g~~~~L~c~~~~~~~~~~~W~~~~~~l~~~~~~~~--~~---r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~ 131 (527)
T 3qs9_E 57 AVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDL--QN---RGVVSMVILKMTETQAGEYLLFIQSEATNYTI 131 (527)
T ss_dssp EEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC----------CEEEEEESSCCSSSCSEEEEEEEC--CEEEE
T ss_pred eEEEeccccEEEEEEEecCCceeEEEEecCCccCcccccCC--Cc---ceEEEEEECcCChhhCeeEEEEEEeccccEEE
Confidence 89999999999999998888899999999988765544422 11 12245999999999999999999999888777
Q ss_pred EeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEEEEEcccCCCCcEE
Q psy2775 101 DIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGR 180 (785)
Q Consensus 101 ~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 180 (785)
.+.|.|. ++.+...........|+.+.|.|.+.|+|.|.|+|++++..+..... ............+..+|+|.
T Consensus 132 ~~~v~v~-----~~~~~~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~G~ 205 (527)
T 3qs9_E 132 LFTVSIR-----NTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKE-ESPAVVKKEEKVLHELFGTD 205 (527)
T ss_dssp EEEEEEC----------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC--------------CEEECCSEECCCCSSC
T ss_pred EEEEEEC-----CceeeccCCCcEEecCCceEEEEEEceecCCeEEEEECCCCCccccc-cCCcEEEEeeeeccccCCEE
Confidence 7777664 11121111223345677889999999999999999998876542211 11111122334456899999
Q ss_pred EEEEEEcCCeeEEEE-EEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEE
Q psy2775 181 YSVKVTNKEGTVESA-ANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQV 259 (785)
Q Consensus 181 Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~ 259 (785)
|+|.|.|..|..... +.|.|...+ .+ ++....+.+|+.+.|.|.+
T Consensus 206 Y~C~A~N~~G~~~~~~~~l~V~~~p--------------------------------~~--~p~~~~v~~G~~v~L~C~~ 251 (527)
T 3qs9_E 206 IRCCARNELGRECTRLFTIDLNQTP--------------------------------QT--TLPQLFLKVGEPLWIRCKA 251 (527)
T ss_dssp EEEEEECSSCEEEEECEEEESSSCC--------------------------------CC--SCCEEEECTTSCEEEEEEE
T ss_pred EEEEEEeCCCcccceEEEEEEeccC--------------------------------cc--CCCceEEeCCCeEEEEEEE
Confidence 999999999977664 667665322 22 2335678899999999999
Q ss_pred c-cCCCCeEEEEECCEEcccce-E---EE-----eCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEEeccccce
Q psy2775 260 G-GEPSPKVEWYKDGKLIKDRQ-I---TS-----EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDQGKAEF 329 (785)
Q Consensus 260 ~-g~p~~~v~W~~~~~~l~~~~-~---~~-----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~ 329 (785)
. |.|.+.|+|+++|..+.... . .. .....+|.|.++..+|+|.|+|.|.|. ...++.|.|...+...
T Consensus 252 ~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~ 328 (527)
T 3qs9_E 252 VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFIN 328 (527)
T ss_dssp EESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEE
T ss_pred ccCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccc
Confidence 6 89999999999998776321 1 11 112356999999999999999999997 5667888887644322
Q ss_pred eee-ccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccceEE
Q psy2775 330 IKK-LDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQETSA 407 (785)
Q Consensus 330 ~~~-~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~~~ 407 (785)
... .....+.+|+.+.|.|.+.+ |.|.++|+++|..+....+... .+ ..|.|.++..+|+|.|+|.|.|..+..
T Consensus 329 ~~~~~~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~--~~--~~L~I~~v~~~D~G~YtC~A~N~~g~~ 404 (527)
T 3qs9_E 329 ATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLD--NG--YSISKFCNHKHQPGEYIFHAENDDAQF 404 (527)
T ss_dssp CCCSCCEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCBCS--SS--SEEEEECCCTTCCSCEEEEEEETTEEE
T ss_pred cccCcccEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCccccc--CC--cEEEEecCCcccCEEEEEEEEeCCCcE
Confidence 211 23466788999999999988 7889999999999866544211 12 249999999999999999999987755
Q ss_pred EEEE---EecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCC-----------EEEEEeCcEEEE
Q psy2775 408 ELNV---VELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSEN-----------VTLSIDGKKQKL 472 (785)
Q Consensus 408 ~~~v---~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~-----------~~~~~~~~~~~L 472 (785)
...+ +..+|.+...+. ...|.|.+.+ |.|.|.|++++........ ...........+
T Consensus 405 ~~~~~L~V~~~P~i~~~~~--------~~~l~C~a~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 476 (527)
T 3qs9_E 405 TKMFTLNIRRKPQVLAEAS--------ASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSS 476 (527)
T ss_dssp EEEEEEC--CCCEEEECCC--------CE---EEEECSSCCEEEEECCC-----CCCCCCCCEEEC---------CEEEE
T ss_pred EEEEEEEEecCCeEEEeCC--------CCEEEEEEEEEcCCeEEEEECCCCcCCCccccccccceeccccccCCceEEEE
Confidence 4432 234555544331 2367999998 7889999988654421110 001111122334
Q ss_pred EEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcC
Q psy2775 473 IIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAP 506 (785)
Q Consensus 473 ~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~ 506 (785)
++.....+|+|.|+|.|.|. |.....+.|.|.++
T Consensus 477 ~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p 511 (527)
T 3qs9_E 477 TLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGP 511 (527)
T ss_dssp ECCCCCSSCSCEEEEEEECSSCEEEEEEEC-----
T ss_pred EEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCCC
Confidence 44444467999999999998 98999999988765
No 16
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=3.5e-47 Score=413.74 Aligned_cols=411 Identities=17% Similarity=0.168 Sum_probs=292.2
Q ss_pred cCCCceEeccCCcEEEEEEEeccCCCeE-----EEeECCEEcccceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeE
Q psy2775 118 EPLHDVSITEGESAVLSVQVGGEPSPKV-----EWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV 192 (785)
Q Consensus 118 ~~~~~~~~~~G~~v~l~C~~~g~p~~~v-----~W~~~g~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 192 (785)
..+....+.+|+.+.|.|.+.| |.+.+ .|+|++..+.. .....|.|.+++. |+| |+|.|.+..+..
T Consensus 4 ~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~------~~~~~l~i~~v~~-d~g-Y~C~a~~~~~~~ 74 (450)
T 1z7z_I 4 VSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG------NNRKVYELSNVQE-DSQ-PMCYSNCPDGQS 74 (450)
T ss_dssp EESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST------TTEEEEEEEEECS-CBC-CEEEEEETTEEE
T ss_pred cCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecC------CCceEEEEEeccc-CCe-eEEEEeCCCCcc
Confidence 3456778899999999999998 88888 99998875532 2345899999987 999 999998877777
Q ss_pred EEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCCC---eEEE
Q psy2775 193 ESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSP---KVEW 269 (785)
Q Consensus 193 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~---~v~W 269 (785)
+..+.|.|...+ ..+...+....+.+|+.+.|.|.+.+.|++ .|.|
T Consensus 75 ~~~~~l~V~~~P-------------------------------~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W 123 (450)
T 1z7z_I 75 TAKTFLTVYWTP-------------------------------ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVL 123 (450)
T ss_dssp EEECEEEEEBCC-------------------------------SEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEE
T ss_pred eeEEEEEEEeCC-------------------------------CcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEE
Confidence 778888887422 222244556778899999999999998887 9999
Q ss_pred EECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceE--------EEEEEEEeccccceeeeccceeEeeC
Q psy2775 270 YKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE--------SAANLNVDQGKAEFIKKLDDLEVKER 341 (785)
Q Consensus 270 ~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~--------~~~~l~v~~~~~~~~~~~~~~~~~~g 341 (785)
+++|..+.............|.|.++..+|+|.|+|.|.|..|... ....|.|...+........+..+.+|
T Consensus 124 ~k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~~~~v~~G 203 (450)
T 1z7z_I 124 LRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVD 203 (450)
T ss_dssp EETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEECCSEEETT
T ss_pred eeCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecCceeEEeC
Confidence 9999988633322233456899999999999999999999866422 22344554321111111122678899
Q ss_pred ccEEEEEEEcCC----CCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCce--EEEEEEeccceE----EEEEE
Q psy2775 342 ENAVLEVEVTSD----KADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEG--EYTCSLPDQETS----AELNV 411 (785)
Q Consensus 342 ~~~~l~C~~~~~----~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G--~Y~C~a~n~~~~----~~~~v 411 (785)
+.+.|.|.+.+. .+.++|++++..+.. +.....++....+.+ ++..+|+| .|+|.|.|..+. ..+.|
T Consensus 204 ~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~--~~~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V 280 (450)
T 1z7z_I 204 TQGTVVCSLDGLFPVSEAQVHLALGDQRLNP--TVTYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTI 280 (450)
T ss_dssp SEEEEEEEEESCTTGGGCEEEEEETTEECCC--EEEEETTEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcEEEEEEeeCCCCCCceEEEEeCCCEeCCc--eEEecCCceeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEE
Confidence 999999999874 579999999998875 222222221111222 77899999 999999987554 34555
Q ss_pred EecC-CcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEe
Q psy2775 412 VELP-PEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVG 490 (785)
Q Consensus 412 ~~~~-~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 490 (785)
...+ |.+. .....+.+|+.++|.|.+. +.+.++| +|..+.. .+....|.|..+..+|+|.|+|.|.
T Consensus 281 ~~~~~p~i~--~~~~~v~~G~~v~l~C~~~-p~p~i~W--~g~~~~~--------~~~~~~L~i~~~~~~d~G~Y~C~a~ 347 (450)
T 1z7z_I 281 YSFPAPNVI--LTKPEVSEGTEVTVKCEAH-PRAKVTL--NGVPAQP--------LGPRAQLLLKATPEDNGRSFSCSAT 347 (450)
T ss_dssp ECCCCCEEE--ESCSEEETTCEEEEEEEC---------------------------CCCCCEEEECCGGGTTCEEEEEEE
T ss_pred ecCCCCeEe--cCCeeEeCCCcEEEEEecC-CCCEeEE--CCEEcCC--------CCceEEEEEecCcccCCceEEEEEE
Confidence 5433 3333 3355789999999999998 8889999 7776621 1222469999999999999999999
Q ss_pred ec-C-c---ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeee-
Q psy2775 491 DT-G-D---KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIER- 564 (785)
Q Consensus 491 n~-g-~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~- 564 (785)
|. + . ...++.|.|..+|. +...
T Consensus 348 n~~~g~~~~~~~~~~l~V~~~P~----------------------------------------------------~~~~~ 375 (450)
T 1z7z_I 348 LEVAGQLIHKNQTRELRVLYGPR----------------------------------------------------LDERD 375 (450)
T ss_dssp EEETTEEEEEEEEEECEEEEEEE----------------------------------------------------CCSTT
T ss_pred cCCCCcccccceeEEEEEecCCc----------------------------------------------------eeecc
Confidence 75 4 2 23567788776542 2211
Q ss_pred -eeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEE
Q psy2775 565 -FEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATH 643 (785)
Q Consensus 565 -~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 643 (785)
+.+..+.+|+.++|.|.+.|+|.|.|+|+|+|..+..+.. . | +++. +|+|.|+|.|.|..|....
T Consensus 376 ~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g~--------~--~---~v~~-~d~G~Y~C~a~N~~G~~~~ 441 (450)
T 1z7z_I 376 CPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGE--------S--V---TVTR-DLEGTYLCRARSTQGEVTR 441 (450)
T ss_dssp SCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTTS--------C--E---ECCG-GGCEEEEEEEEETTEEEEE
T ss_pred CCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCCC--------e--E---eEeh-hhCeEEEEEEEeCCCceeE
Confidence 1356788999999999999999999999999985543321 1 2 4677 9999999999999999999
Q ss_pred EEEEEEE
Q psy2775 644 GARVTVD 650 (785)
Q Consensus 644 ~~~l~V~ 650 (785)
++.|.|+
T Consensus 442 ~~~l~V~ 448 (450)
T 1z7z_I 442 EVTVNVL 448 (450)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999886
No 17
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=7.7e-47 Score=411.03 Aligned_cols=415 Identities=15% Similarity=0.182 Sum_probs=302.4
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecCCCee-----EEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVPEPDL-----LWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i-----~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
+|...|..+.+.+|++++|.|.+.| |.+.+ .|++++..+.. .+. ..|.|.+++. |+| |+
T Consensus 1 ~i~~~P~~~~v~~G~~v~L~C~~~g-p~p~~~~~~~~w~k~~~~~~~-~~~------------~~l~i~~v~~-d~g-Y~ 64 (450)
T 1z7z_I 1 QTSVSPSKVILPRGGSVLVTCSTSC-DQPMLLGIETPLPKKELLLPG-NNR------------KVYELSNVQE-DSQ-PM 64 (450)
T ss_dssp CCEEESSEEEEETTEEEEEEEECCS-SCCCEEEECSSSCEEECCSST-TTE------------EEEEEEEECS-CBC-CE
T ss_pred CcccCCCceEEecCCcEEEEEEccC-CCcccccccceeeecceEecC-CCc------------eEEEEEeccc-CCe-eE
Confidence 3567789999999999999999998 88888 99988764432 111 3599999987 999 99
Q ss_pred EEEEcCCeeEEEEeeEEEeCCCCCCCcee-cCCCceEeccCCcEEEEEEEeccCCC---eEEEeECCEEcccceEEEeCC
Q psy2775 89 VVAKNREGEAKMDIPVKVNTGKPEKPSIL-EPLHDVSITEGESAVLSVQVGGEPSP---KVEWYKDGKLIKDRQITSEKN 164 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~~~~~~p~i~-~~~~~~~~~~G~~v~l~C~~~g~p~~---~v~W~~~g~~~~~~~~~~~~~ 164 (785)
|.|.+..+..+..+.|.|.. +|.+. ..+....+.+|+.+.|.|.+.|.|++ .|+|+|||..+..........
T Consensus 65 C~a~~~~~~~~~~~~l~V~~----~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~ 140 (450)
T 1z7z_I 65 CYSNCPDGQSTAKTFLTVYW----TPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPA 140 (450)
T ss_dssp EEEEETTEEEEEECEEEEEB----CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTE
T ss_pred EEEeCCCCcceeEEEEEEEe----CCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeeccccccccc
Confidence 99988777777788888874 44444 55566789999999999999998887 999999999887554333444
Q ss_pred EEEEEEcccCCCCcEEEEEEEEcCCeeEE--------EEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCC
Q psy2775 165 THTLTLIQCSTKDKGRYSVKVTNKEGTVE--------SAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKP 236 (785)
Q Consensus 165 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~--------~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 236 (785)
..+|.|.+++.+|+|.|+|.|.|..|... ....+.|...+ ..+|
T Consensus 141 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~----------------------------~~~p 192 (450)
T 1z7z_I 141 EVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLP----------------------------ATPP 192 (450)
T ss_dssp EEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCC----------------------------SSCC
T ss_pred ceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccC----------------------------CCCC
Confidence 56899999999999999999999866322 12333333210 1234
Q ss_pred eeeecCCcceeCCCCeEEEEEEEccC-C--CCeEEEEECCEEcccceEEEeCCEEEEE-EccCCCCCCe--EEEEEEEeC
Q psy2775 237 SILEPLHDVSITEGESAVLSVQVGGE-P--SPKVEWYKDGKLIKDRQITSEKNTHTLT-LIQCSTKDKG--RYSVKVTNK 310 (785)
Q Consensus 237 ~~~~~~~~~~~~~G~~~~l~C~~~g~-p--~~~v~W~~~~~~l~~~~~~~~~~~~~l~-i~~~~~~d~G--~Y~C~~~n~ 310 (785)
.+..+ ..+.+|+.+.|.|.+.|. | .+.+.|+++|..+.. .+........+. ..++..+|+| .|+|.+.|.
T Consensus 193 ~~~~~---~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~ 268 (450)
T 1z7z_I 193 QLVSP---RVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP-TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILG 268 (450)
T ss_dssp EEECC---SEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECCC-EEEEETTEEEEEEEEECCGGGCEEEEEEEEEEET
T ss_pred EecCc---eeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCCc-eEEecCCceeEEEEEEeEhhhCCcEEEEEEEccC
Confidence 44332 577899999999999998 6 689999999998875 333333332222 2277899999 999999999
Q ss_pred CCceEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcCCCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCC
Q psy2775 311 EGTVESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTSDKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISV 390 (785)
Q Consensus 311 ~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~ 390 (785)
.|.....+.|.|...++ .........+.+|+.++|.|.+. |.+.++| +|..+... +....|.|.++..
T Consensus 269 ~g~~~~~~~l~V~~~~~-p~i~~~~~~v~~G~~v~l~C~~~-p~p~i~W--~g~~~~~~--------~~~~~L~i~~~~~ 336 (450)
T 1z7z_I 269 NQSQETLQTVTIYSFPA-PNVILTKPEVSEGTEVTVKCEAH-PRAKVTL--NGVPAQPL--------GPRAQLLLKATPE 336 (450)
T ss_dssp TEEEEEEEEEEEECCCC-CEEEESCSEEETTCEEEEEEEC---------------------------CCCCCEEEECCGG
T ss_pred CccEEEEEEEEEecCCC-CeEecCCeeEeCCCcEEEEEecC-CCCEeEE--CCEEcCCC--------CceEEEEEecCcc
Confidence 99888888999887444 22234456899999999999998 8899999 77766211 1222499999999
Q ss_pred CCceEEEEEEeccce--------EEEEEEEecCCcccccC--CCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCC
Q psy2775 391 HDEGEYTCSLPDQET--------SAELNVVELPPEISVPL--QDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSE 459 (785)
Q Consensus 391 ~d~G~Y~C~a~n~~~--------~~~~~v~~~~~~~~~~~--~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~ 459 (785)
+|+|.|+|.|.|..+ ...+.|.. +|.+...+ ....+.+|+.++|.|.+.+ |.|.+.|+|+|..+...+
T Consensus 337 ~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~-~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~~~~g 415 (450)
T 1z7z_I 337 DNGRSFSCSATLEVAGQLIHKNQTRELRVLY-GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG 415 (450)
T ss_dssp GTTCEEEEEEEEEETTEEEEEEEEEECEEEE-EEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTT
T ss_pred cCCceEEEEEEcCCCCcccccceeEEEEEec-CCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCcccCCCC
Confidence 999999999986322 23344443 44444433 5668899999999999998 888999999988543322
Q ss_pred CEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcC
Q psy2775 460 NVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAP 506 (785)
Q Consensus 460 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~ 506 (785)
. .+ .++.+|+|.|+|.|.|. |....++.|.|..+
T Consensus 416 ~----------~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 416 E----------SV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp S----------CE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred C----------eE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 1 12 57789999999999998 88889999999763
No 18
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=409.73 Aligned_cols=440 Identities=15% Similarity=0.198 Sum_probs=295.4
Q ss_pred CCcceeCCCCeEEEEEEEccCCCCeEEEEECC--EEcc-------------cceE--EEeCCEEEEEEccCCCCCCeEEE
Q psy2775 242 LHDVSITEGESAVLSVQVGGEPSPKVEWYKDG--KLIK-------------DRQI--TSEKNTHTLTLIQCSTKDKGRYS 304 (785)
Q Consensus 242 ~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~--~~l~-------------~~~~--~~~~~~~~l~i~~~~~~d~G~Y~ 304 (785)
+....+.+|+.+.|.|.+.+.|.+.+.|++++ ..+. ..++ ........|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (523)
T 2rcj_C 7 PPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYY 86 (523)
T ss_pred CCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEE
Confidence 44667889999999999999999999999974 2111 0111 12234568999999999999999
Q ss_pred EEEEeCCCce---EEEEEEEEec---cccceeeeccceeEeeCccEEEEEEEcC-CC--CeEEEEECCEEcCCCCcEEE-
Q psy2775 305 VKVTNKEGTV---ESAANLNVDQ---GKAEFIKKLDDLEVKERENAVLEVEVTS-DK--ADVKWFKDGQEIKTSKKVTI- 374 (785)
Q Consensus 305 C~~~n~~g~~---~~~~~l~v~~---~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~--~~v~W~~~~~~l~~~~~~~~- 374 (785)
|.|.|..|.. ...+.|.|.. .+|.+...+....+.+|+.+.|.|.+.+ ++ +.++|+++|..+..+.....
T Consensus 87 C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 166 (523)
T 2rcj_C 87 CASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKP 166 (523)
T ss_pred EEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccc
Confidence 9999986532 2346777742 2344444444556678999999999987 33 39999999998865543221
Q ss_pred --EEcCc---EEEEEEcCCCCCCceEEEEEEeccceEEEEEEE-------ecCCcccccCCCeEEecCCcEEEEEEEeC-
Q psy2775 375 --EKKGT---IRKLLIRNISVHDEGEYTCSLPDQETSAELNVV-------ELPPEISVPLQDVKVSRDEKASFEIELTK- 441 (785)
Q Consensus 375 --~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~~v~-------~~~~~~~~~~~~~~v~~g~~~~l~C~~~~- 441 (785)
..++. .+.|.|.++..+|+|.|+|.|.|..+.....+. ..+|.+........+.+|+.+.|.|.+.+
T Consensus 167 ~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~~~g~ 246 (523)
T 2rcj_C 167 SKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY 246 (523)
T ss_pred cccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEEEece
Confidence 12222 236999999999999999999997665443332 23444443333345678999999999987
Q ss_pred -CCc-eEEEEECCEEcccCCCEEEEEe-C---cEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccC
Q psy2775 442 -GDA-LVKWYKDGKEIAFSENVTLSID-G---KKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKL 514 (785)
Q Consensus 442 -~~~-~i~W~~~~~~~~~~~~~~~~~~-~---~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~ 514 (785)
|.+ .|+|++++..+........... + ..+.|.|.++..+| |.|+|.|.|. |.......|.|...|
T Consensus 247 ~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P------- 318 (523)
T 2rcj_C 247 FPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLP------- 318 (523)
T ss_pred eCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCc-------
Confidence 445 7999999987532211111111 1 13589999999999 9999999997 766656666554321
Q ss_pred CCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeee-eeeecCeEEEEEEEecCCC----Cc
Q psy2775 515 PSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEK-TVKEKGTIRLMAKVKASPA----PS 589 (785)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~-~v~~g~~v~l~C~~~g~P~----p~ 589 (785)
+.++..+... .+.+|+.++|.|.+.|.|+ +.
T Consensus 319 --------------------------------------------~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~ 354 (523)
T 2rcj_C 319 --------------------------------------------SVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVK 354 (523)
T ss_pred --------------------------------------------eEEecCCCchhhcccCCceEEEEEEecccCCCCceE
Confidence 1111122222 3788999999999999754 48
Q ss_pred eEEEeCCEEecCCCCeeEE-eeCC----eEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEeeccCCCCCccccc
Q psy2775 590 IVWFRNNKPLLSSPKKREI-FDGE----NIILELKEADSETDAGDYKVVATNELGSATHGARVTVDVEKVGRPPINSIDI 664 (785)
Q Consensus 590 v~W~~~~~~i~~~~~~~~~-~~~~----~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~ 664 (785)
|+|+|+|..+......... ..++ .+.|.|.++.. +|+|.|+|.|.|..|....+..|.+..
T Consensus 355 v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~G~Y~C~a~n~~~~~~~~~~~~~~~------------- 420 (523)
T 2rcj_C 355 FNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNW-LDGKEYKCKVSNKALPAPIEKTISKAK------------- 420 (523)
T ss_pred EEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHh-cCCCeEEEEEeCCCCCCceeEEEEccc-------------
Confidence 9999999998765432221 1222 24699999988 999999999999988765554444310
Q ss_pred cccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeEEEEEEEecCCCC--ceEEeECCEEeeeccccc
Q psy2775 665 DRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRFKALPPP--KAEWTVNGTVIVPSKRVK 742 (785)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~P~p--~i~W~~~~~~~~~~~~~~ 742 (785)
.+..+|.+.........+..|+ ++|.|.+.|.|+| .|+|++||..+.......
T Consensus 421 ------------------------~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~ 475 (523)
T 2rcj_C 421 ------------------------GQPREPQVYTLPPSREEMTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP 475 (523)
T ss_pred ------------------------CCCCCCEEEEeCCChHHccCCc-eEEEEEEEeeECCCCEEEEEECCEECCCeeecc
Confidence 1224455443222222234454 9999999998777 899999999987554322
Q ss_pred cc--hh--h--hcccccceeeeeeceEEEEEEeccc
Q psy2775 743 GK--AE--F--IKKLDDLEVKERENAVLEVEVTSDK 772 (785)
Q Consensus 743 ~~--~~--~--~~~l~~~~v~~~~~~~~~c~~~~~~ 772 (785)
.. .+ + ...|.+......|.|.|+|.+.++.
T Consensus 476 ~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~ 511 (523)
T 2rcj_C 476 PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 511 (523)
T ss_pred ceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCC
Confidence 21 11 1 1122222223356899999999855
No 19
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=3.5e-43 Score=372.74 Aligned_cols=352 Identities=23% Similarity=0.352 Sum_probs=265.5
Q ss_pred CCCeeeecCCccee---CCCCeEEEEEEEccCCCCeEEEEECCEEcc---cceEEEeCCEEEEEEccC-CCCCCeEEEEE
Q psy2775 234 EKPSILEPLHDVSI---TEGESAVLSVQVGGEPSPKVEWYKDGKLIK---DRQITSEKNTHTLTLIQC-STKDKGRYSVK 306 (785)
Q Consensus 234 ~~p~~~~~~~~~~~---~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~---~~~~~~~~~~~~l~i~~~-~~~d~G~Y~C~ 306 (785)
.+|.|+..+....+ .+|+.+.|.|.+.|+|.|.|+|+++|..+. ...+...++ .|.|.+. ..+|+|.|+|.
T Consensus 4 ~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g--~l~i~~~~~~~D~G~Y~C~ 81 (384)
T 3kld_A 4 SGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTYQCI 81 (384)
T ss_dssp EEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETT--EEEEESCCHHHHCEEEEEE
T ss_pred CCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECC--EEEEcCCCCcccCEEEEEE
Confidence 34667776666555 589999999999999999999999999986 223333333 5666665 78899999999
Q ss_pred EEeCCCceEE-EEEEEEeccccceeeeccceeEeeCccEEEEEEEcC--CCCeEEEEECCEEcCCCCcEEEEEcCcEEEE
Q psy2775 307 VTNKEGTVES-AANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS--DKADVKWFKDGQEIKTSKKVTIEKKGTIRKL 383 (785)
Q Consensus 307 ~~n~~g~~~~-~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l 383 (785)
|.|..|.... .+.|.+...+...........+.+|+.+.|.|.... +.+.+.|++++.++....+........ .|
T Consensus 82 A~N~~G~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~L 159 (384)
T 3kld_A 82 ATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETG--NL 159 (384)
T ss_dssp EEETTEEEECCCEEEEEEEECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEECTTTC--CE
T ss_pred EEcCcccEEecceEEEEecccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEEcCCC--cE
Confidence 9999886543 356666543332233345577899999999997643 467999999999886555433322221 39
Q ss_pred EEcCCCCCCceEEEEEEeccceEEE-------EEEE------ecCCccc-ccCCCeEEecCCcEEEEEEEeC-CCceEEE
Q psy2775 384 LIRNISVHDEGEYTCSLPDQETSAE-------LNVV------ELPPEIS-VPLQDVKVSRDEKASFEIELTK-GDALVKW 448 (785)
Q Consensus 384 ~i~~~~~~d~G~Y~C~a~n~~~~~~-------~~v~------~~~~~~~-~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W 448 (785)
.|.++..+|+|.|+|.|.|..+... +.+. ..+|.+. ..+....+.+|+.+.|.|.+.+ |.|.+.|
T Consensus 160 ~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W 239 (384)
T 3kld_A 160 YIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILW 239 (384)
T ss_dssp EESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEE
T ss_pred EEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEE
Confidence 9999999999999999998654322 1111 1122222 2345667889999999999998 7889999
Q ss_pred EEC-CEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCce
Q psy2775 449 YKD-GKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDA 526 (785)
Q Consensus 449 ~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 526 (785)
+++ +..+.... .. ......|.|.+++.+|+|.|+|.|.|. |.....+.|.|..+
T Consensus 240 ~k~~~~~~~~~~--~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~-------------------- 295 (384)
T 3kld_A 240 RRADGKPIARKA--RR--HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQ-------------------- 295 (384)
T ss_dssp EETTCCCCCTTC--EE--CTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE--------------------
T ss_pred EeCCCccccccc--ee--cCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecC--------------------
Confidence 995 44443221 11 122347999999999999999999998 87788888888765
Q ss_pred eEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCee
Q psy2775 527 TFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKR 606 (785)
Q Consensus 527 ~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~ 606 (785)
|.|...+.+..+.+|+++.|.|.+.|.|.|.|+|+|+|..+..+.+..
T Consensus 296 --------------------------------P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~ 343 (384)
T 3kld_A 296 --------------------------------PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQ 343 (384)
T ss_dssp --------------------------------EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEE
T ss_pred --------------------------------CccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEE
Confidence 555555667789999999999999999999999999999997766543
Q ss_pred EEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 607 EIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 607 ~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+ .+ .+|.|.++.. +|+|.|+|.|.|..|...+++.|.|.
T Consensus 344 ~--~~--~~L~i~~v~~-~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 344 I--EQ--GTLNITIVNL-SDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp E--ET--TEEEESSCCG-GGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred E--eC--CEEEEeecCh-hhCEEEEEEEEeCCceEEeceEEEEe
Confidence 2 22 2699999999 99999999999999999999999985
No 20
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=3.9e-41 Score=358.91 Aligned_cols=348 Identities=12% Similarity=0.144 Sum_probs=236.6
Q ss_pred eeecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccce-EE-EeCCEEEEEEccCCCCCCeEEEEEEEeCCCceE
Q psy2775 238 ILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ-IT-SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE 315 (785)
Q Consensus 238 ~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~-~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 315 (785)
++..+....+.+|+.+.|.|.+.+.|.+.|.|++++..+.... .. .......|.|.+++.+|+|.|+|.|.|..|...
T Consensus 51 ~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~ 130 (423)
T 3qs7_E 51 TVYEAAAVEVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYT 130 (423)
T ss_dssp -----CEEEECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEE
T ss_pred ceeccccEEEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEE
Confidence 3333447889999999999999999999999999998765211 11 122345799999999999999999999999888
Q ss_pred EEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCC---cEEEEEcCcEEEEEEcCCCCC
Q psy2775 316 SAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSK---KVTIEKKGTIRKLLIRNISVH 391 (785)
Q Consensus 316 ~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~---~~~~~~~~~~~~l~i~~~~~~ 391 (785)
..+.|.|...+ .+ ....+.....|+.+.|.|.+.+ |.|.++|++++..+.... ...+..... . +...
T Consensus 131 ~~~~l~V~~~p-~~-~~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~----~---l~~~ 201 (423)
T 3qs7_E 131 ILFTVSIRNTL-LY-TLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEK----V---LHEL 201 (423)
T ss_dssp EEEEEEEC-------CEEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCS----E---ECCC
T ss_pred EEEEEEEecCc-cc-cccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccce----E---Eecc
Confidence 88888887533 22 2223344566888899999988 789999999887553211 011111111 1 1578
Q ss_pred CceEEEEEEeccceEEEEE--EEecCCcccccCCCeEEecCCcEEEEEEEeC-C-CceEEEEECCEEcccCCCEEEEE--
Q psy2775 392 DEGEYTCSLPDQETSAELN--VVELPPEISVPLQDVKVSRDEKASFEIELTK-G-DALVKWYKDGKEIAFSENVTLSI-- 465 (785)
Q Consensus 392 d~G~Y~C~a~n~~~~~~~~--v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~-~~~i~W~~~~~~~~~~~~~~~~~-- 465 (785)
|+|.|+|.|.|..+..... .+........++....+.+|+.+.|.|.+.+ + .+.|+|++++..+..........
T Consensus 202 d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~ 281 (423)
T 3qs7_E 202 FGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYS 281 (423)
T ss_dssp CSSCEEEEEECSSCEEEEECEEEESSSCCCSSTTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEE
T ss_pred cCeEEEEEEEcCCCCcceeeEEEEEecCCccCCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeeccccc
Confidence 9999999999987654321 1122212222455778899999999999998 3 47899999998875543221111
Q ss_pred ----eCcEEEEEEccCCCCCcEEEEEEEeecCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEE
Q psy2775 466 ----DGKKQKLIIFSAGLEDAGEYSCRVGDTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKW 541 (785)
Q Consensus 466 ----~~~~~~L~i~~~~~~d~G~Y~C~a~n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 541 (785)
......|.|.+++.+|+|.|+|.|.|. ...++.|.|..++.. .
T Consensus 282 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~--~~~~~~L~V~~~p~i--------~----------------------- 328 (423)
T 3qs7_E 282 TNRTMIRILFAFVSSVARNDTGYYTCSSSKH--PSQSALVTIVEKGFI--------N----------------------- 328 (423)
T ss_dssp TTTEEEEEEEEEESSCCTTTCEEEEEEETTE--EEEEEEEEEESSCEE--------E-----------------------
T ss_pred CCceeEEEEEEEEeecCHHHCEEEEEEEecC--CCceEEEEEEeCCcc--------e-----------------------
Confidence 112347999999999999999999997 677788888876421 0
Q ss_pred eecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccC
Q psy2775 542 LNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEA 621 (785)
Q Consensus 542 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~ 621 (785)
+........+.+|++++|.|.+.|+|.|.|+|+|+|..+..+... . .....+.+...
T Consensus 329 -------------------~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~---~-~~~~~~~~~~~ 385 (423)
T 3qs7_E 329 -------------------ATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKG---L-DNGYSISKFCN 385 (423)
T ss_dssp -------------------EC---CEECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECBCCB---C-SSSSEEEEECC
T ss_pred -------------------EcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCcccc---c-cCCcEEEEEec
Confidence 001113567889999999999999999999999999999654310 0 01122223455
Q ss_pred CCCCCceeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 622 DSETDAGDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 622 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
.. +|+|.|+|.|.|..|.+..++.|.|+.
T Consensus 386 ~~-~D~G~YtC~A~N~~G~~~~s~~L~v~~ 414 (423)
T 3qs7_E 386 HK-HQPGEYIFHAENDDAQFTKMFTLNIRS 414 (423)
T ss_dssp CT-TCCSCEEEEEEETTEEEEEEEEEC---
T ss_pred cc-ccCEEEEEEEEcCCceEEEEEEEEEec
Confidence 66 899999999999999999888888863
No 21
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=2.4e-41 Score=358.61 Aligned_cols=360 Identities=20% Similarity=0.321 Sum_probs=267.4
Q ss_pred CCCCeeeecCCceEe---cCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEccc-CCCCCe
Q psy2775 10 GIPPTFSKKTKPVYA---EENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSI-KKREEG 85 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v---~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~-~~~D~G 85 (785)
+.+|.|..+|..+.+ .+|+++.|.|.+.|.|.|.|.|+++|..+.......+...++ .|.|.++ +.+|+|
T Consensus 3 ~~~P~f~~~P~~~~~~~~~eg~~v~L~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g------~l~i~~~~~~~D~G 76 (384)
T 3kld_A 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG------SLLINNPNKTQDAG 76 (384)
T ss_dssp CEEEEEEECCCCEEEETTCSCSEEEECCEEEEESCCEEEEEETTEECCC----CEEEETT------EEEEESCCHHHHCE
T ss_pred CCCCEEEeCCcceEeecCCCCCeEEEEeEecCCCCCEEEEEECCEECcCCCCccEEEECC------EEEEcCCCCcccCE
Confidence 568999999999887 689999999999999999999999999986554333332222 3667665 788999
Q ss_pred EEEEEEEcCCeeEEE-EeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEe-ccCCCeEEEeECCEEcccc-eEEEe
Q psy2775 86 VYTVVAKNREGEAKM-DIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVG-GEPSPKVEWYKDGKLIKDR-QITSE 162 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~-~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~-g~p~~~v~W~~~g~~~~~~-~~~~~ 162 (785)
.|+|.|.|..|.... ...+.+.. .++........+.+.+|+.+.|.|... +.|.+.+.|++++.++... .....
T Consensus 77 ~Y~C~A~N~~G~~~s~~~~l~v~~---~~~~~~~~~~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 153 (384)
T 3kld_A 77 TYQCIATNSFGTIVSREAKLQFAY---LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVS 153 (384)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEE---ECCCSCCCCCCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEEEC
T ss_pred EEEEEEEcCcccEEecceEEEEec---ccccccCCCCceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEEEE
Confidence 999999999987542 44555532 112222233457788999999999764 4567899999999887533 22223
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE---EEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeee
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA---ANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSIL 239 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~---~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 239 (785)
.....|.|.++..+|+|.|+|.|.|..+..... ..+.+.... .....+|.+.
T Consensus 154 ~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~-------------------------~~~~~~p~~~ 208 (384)
T 3kld_A 154 QETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDG-------------------------VMGEYEPKIE 208 (384)
T ss_dssp TTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEE-------------------------ECCCEEEEEE
T ss_pred cCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCC-------------------------cccccCCcee
Confidence 334579999999999999999999987654321 222221100 0000122232
Q ss_pred -ecCCcceeCCCCeEEEEEEEccCCCCeEEEEEC-CEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEE
Q psy2775 240 -EPLHDVSITEGESAVLSVQVGGEPSPKVEWYKD-GKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA 317 (785)
Q Consensus 240 -~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~-~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 317 (785)
..+....+.+|+.+.|.|.+.|.|.+.+.|+++ +..+.... ........|.|.++..+|+|.|+|.|.|..|.....
T Consensus 209 ~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~ 287 (384)
T 3kld_A 209 VQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKA-RRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAK 287 (384)
T ss_dssp EECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTC-EECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred ecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccc-eecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEE
Confidence 234456678999999999999999999999995 44444222 222344589999999999999999999999998888
Q ss_pred EEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEE
Q psy2775 318 ANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEY 396 (785)
Q Consensus 318 ~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 396 (785)
..|.|.. +|.+...+....+..|+.+.|.|.+.+ |.+.++|+++|..+....++.+ .++ .|.|.++..+|+|.|
T Consensus 288 ~~l~v~~-~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~-~~~---~L~i~~v~~~D~G~Y 362 (384)
T 3kld_A 288 GQLTFYA-QPNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI-EQG---TLNITIVNLSDAGMY 362 (384)
T ss_dssp EEEEEEE-EEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCBTTEEE-ETT---EEEESSCCGGGCEEE
T ss_pred EEEEEec-CCccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCCccEEE-eCC---EEEEeecChhhCEEE
Confidence 8898886 455666667788999999999999987 7889999999999987777664 344 399999999999999
Q ss_pred EEEEeccceEEEE
Q psy2775 397 TCSLPDQETSAEL 409 (785)
Q Consensus 397 ~C~a~n~~~~~~~ 409 (785)
+|.|.|..|....
T Consensus 363 ~C~A~N~~G~~~~ 375 (384)
T 3kld_A 363 QCVAENKHGVIFS 375 (384)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEeCCceEEe
Confidence 9999998776543
No 22
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-40 Score=357.16 Aligned_cols=354 Identities=21% Similarity=0.349 Sum_probs=276.3
Q ss_pred CCCeeeecCCcceeCCCCeEEEEEEEcc-CCCCeEEEEECCEEccc---ceEEEeCCEEEEEEccC-----CCCCCeEEE
Q psy2775 234 EKPSILEPLHDVSITEGESAVLSVQVGG-EPSPKVEWYKDGKLIKD---RQITSEKNTHTLTLIQC-----STKDKGRYS 304 (785)
Q Consensus 234 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~~~v~W~~~~~~l~~---~~~~~~~~~~~l~i~~~-----~~~d~G~Y~ 304 (785)
....+...+....+.+|+.++|.|.+.+ .|.+.+.|+++|..+.. ...... ....|.|.++ +.+|+|.|+
T Consensus 20 ~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~-~~~~l~i~~~~~~~~~~~D~G~Y~ 98 (403)
T 3laf_A 20 RSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQL-PNGSLLIQNILHSRHHKPDEGLYQ 98 (403)
T ss_dssp CSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEEC-TTSCEEECSCCCBTTBCSSCEEEE
T ss_pred eeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEe-cCCcEEEeeeeccCCCCCcceEEE
Confidence 3456777888899999999999999976 67889999999998862 122221 2235777776 678999999
Q ss_pred EEEEeCCCceE--EEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCC---CCcEEEEEcC
Q psy2775 305 VKVTNKEGTVE--SAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKT---SKKVTIEKKG 378 (785)
Q Consensus 305 C~~~n~~g~~~--~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~---~~~~~~~~~~ 378 (785)
|.+.|..+... ..+.+.|.. ++.+...+....+.+|+.+.|.|.+.+ +.+.++|++++..+.. ..+.....++
T Consensus 99 C~~~~~~~~~~~s~~~~l~v~~-p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 177 (403)
T 3laf_A 99 CEASLGDSGSIISRTAKVMVAG-PLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG 177 (403)
T ss_dssp EEEECGGGCEEECCCEEEEECC-CCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTS
T ss_pred EEEEeCCCccEEEEEEEEEecC-CCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCc
Confidence 99997644333 235666654 555666667788999999999999977 6779999999988743 2244433344
Q ss_pred cEEEEEEcCCCCCCceEEEEEEeccce-----EEEEEEEecCC-----cccccCCCeEEecCCcEEEEEEEeC-CCceEE
Q psy2775 379 TIRKLLIRNISVHDEGEYTCSLPDQET-----SAELNVVELPP-----EISVPLQDVKVSRDEKASFEIELTK-GDALVK 447 (785)
Q Consensus 379 ~~~~l~i~~~~~~d~G~Y~C~a~n~~~-----~~~~~v~~~~~-----~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~ 447 (785)
. |.|.++..+|+|.|+|.+.|..+ ...+.+...|. .+...+....+.+|+.++|.|.+.+ +.+.+.
T Consensus 178 ~---L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~ 254 (403)
T 3laf_A 178 A---LQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFT 254 (403)
T ss_dssp C---EEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEE
T ss_pred e---EEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEE
Confidence 3 99999999999999999998543 34555554432 2334566778889999999999998 788999
Q ss_pred EEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCce
Q psy2775 448 WYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDA 526 (785)
Q Consensus 448 W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 526 (785)
|++++..+...........+ ..|.|.+++.+|+|.|+|.|.|. |....++.|.|..+
T Consensus 255 W~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~-------------------- 312 (403)
T 3laf_A 255 WLRGEEVIQLRSKKYSLLGG--SNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVP-------------------- 312 (403)
T ss_dssp EEETTEECCCSSSSEEEETT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE--------------------
T ss_pred EEECCeeccCCCceEEECCc--cEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECC--------------------
Confidence 99999988765443333333 37999999999999999999998 77778888888765
Q ss_pred eEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCee
Q psy2775 527 TFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKR 606 (785)
Q Consensus 527 ~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~ 606 (785)
|.+...+.+..+.+|+.++|.|.+.|+|.|.|.|+|+|..+..+.+..
T Consensus 313 --------------------------------p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~ 360 (403)
T 3laf_A 313 --------------------------------PWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQ 360 (403)
T ss_dssp --------------------------------EEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEE
T ss_pred --------------------------------CcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEE
Confidence 445555556788899999999999999999999999999987766543
Q ss_pred EEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 607 EIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 607 ~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+. ....|.|.++.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 361 ~~---~~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~ 400 (403)
T 3laf_A 361 IV---GGSNLRILGVVK-SDEGFYQCVAENEAGNAQSSAQLIVP 400 (403)
T ss_dssp EE---TTTEEEESSCCG-GGCEEEEEEEEETTEEEEEEEEEECC
T ss_pred Ee---cCccEEEecccc-ccCEEEEEEEEcCCceEEEEEEEEEe
Confidence 33 234699999999 99999999999999999999988886
No 23
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.7e-41 Score=360.50 Aligned_cols=350 Identities=20% Similarity=0.298 Sum_probs=269.4
Q ss_pred CCCeeeecCCccee---CCCCeEEEEEEEccCCCCeEEEEECCEEccc---ceEEEeCCEEEEEEccCCC-CCCeEEEEE
Q psy2775 234 EKPSILEPLHDVSI---TEGESAVLSVQVGGEPSPKVEWYKDGKLIKD---RQITSEKNTHTLTLIQCST-KDKGRYSVK 306 (785)
Q Consensus 234 ~~p~~~~~~~~~~~---~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~---~~~~~~~~~~~l~i~~~~~-~d~G~Y~C~ 306 (785)
.+|.|...+....+ .+|+.+.|.|.+.|+|.+.+.|+++|..+.. ..+...++ .|.|.++.. +|+|.|+|.
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~--~L~i~~~~~~~D~G~Y~C~ 80 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAG--DLVISNPVKAKDAGSYQCV 80 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEETT--EEEEESCCHHHHCEEEEEE
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEeeCC--eEEEecccccccCEEEEEE
Confidence 45778887777765 7899999999999999999999999998862 23333333 799999987 999999999
Q ss_pred EEeCCCceEE-EEEEEEeccccceeeeccceeEeeCccEEEEEEEcC--CCCeEEEEECCEEcC--CCCcEEEEEcCcEE
Q psy2775 307 VTNKEGTVES-AANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS--DKADVKWFKDGQEIK--TSKKVTIEKKGTIR 381 (785)
Q Consensus 307 ~~n~~g~~~~-~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~~~v~W~~~~~~l~--~~~~~~~~~~~~~~ 381 (785)
|.|..|.... .+.|.|...+...........+.+|+.+.|.|.+.. +.+.+.|++++..+. ...+....... .
T Consensus 81 a~n~~g~~~s~~~~l~v~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~ 158 (382)
T 1cs6_A 81 ATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTT--G 158 (382)
T ss_dssp EEETTEEEECCCEEEEEEEECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTT--C
T ss_pred EEcCCcEEEecceEEEeeccccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCc--e
Confidence 9998876543 366666654433333455678899999999998643 678999999987653 23333332221 2
Q ss_pred EEEEcCCCCCCceEEEEEEeccce----E-----EEEEEEe-----cCCcccc-cCCCeEEecCCcEEEEEEEeC-CCce
Q psy2775 382 KLLIRNISVHDEGEYTCSLPDQET----S-----AELNVVE-----LPPEISV-PLQDVKVSRDEKASFEIELTK-GDAL 445 (785)
Q Consensus 382 ~l~i~~~~~~d~G~Y~C~a~n~~~----~-----~~~~v~~-----~~~~~~~-~~~~~~v~~g~~~~l~C~~~~-~~~~ 445 (785)
.|.|.++..+|+|.|+|.+.|..+ . ..+.+.. .+|.+.. .+....+.+|+.++|.|.+.+ +.+.
T Consensus 159 ~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~ 238 (382)
T 1cs6_A 159 NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQ 238 (382)
T ss_dssp CEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCE
T ss_pred EEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCE
Confidence 499999999999999999988652 1 1222211 1333333 345677889999999999988 7789
Q ss_pred EEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccC
Q psy2775 446 VKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLG 524 (785)
Q Consensus 446 i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~ 524 (785)
+.|++++..+.... ......|.|.+++.+|+|.|+|.|.|. |.....+.|.|..+
T Consensus 239 i~W~~~~~~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~------------------ 294 (382)
T 1cs6_A 239 IKWRKLDGSQTSKW------LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQ------------------ 294 (382)
T ss_dssp EEEEECCSCCSCCC------SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE------------------
T ss_pred EEEEECCcccccEE------ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecC------------------
Confidence 99999887754311 112347999999999999999999998 77777888888765
Q ss_pred ceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCC
Q psy2775 525 DATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPK 604 (785)
Q Consensus 525 ~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~ 604 (785)
|.+...+....+.+|+.++|.|.+.|+|.|.|.|+|+|..+..+.+
T Consensus 295 ----------------------------------p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~ 340 (382)
T 1cs6_A 295 ----------------------------------PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNR 340 (382)
T ss_dssp ----------------------------------EEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSS
T ss_pred ----------------------------------CCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCce
Confidence 4455555567889999999999999999999999999999987665
Q ss_pred eeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 605 KREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 605 ~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
..+ .+ .+|.|.++.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 341 ~~~--~~--~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 341 IEV--SG--GELRFSKLVL-EDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp EEE--ET--TEEEESSCCG-GGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEE--EC--CEEEECcCCc-ccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 433 22 3699999999 99999999999999999999998885
No 24
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.9e-41 Score=363.30 Aligned_cols=356 Identities=21% Similarity=0.380 Sum_probs=274.0
Q ss_pred CCCeeee-cCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcc---cceEEEeCCEEEEEEc----cCCCCCCeEEEE
Q psy2775 234 EKPSILE-PLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIK---DRQITSEKNTHTLTLI----QCSTKDKGRYSV 305 (785)
Q Consensus 234 ~~p~~~~-~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~---~~~~~~~~~~~~l~i~----~~~~~d~G~Y~C 305 (785)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+. ............|.|. ++..+|+|.|+|
T Consensus 15 ~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C 94 (404)
T 3p3y_A 15 QPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQC 94 (404)
T ss_dssp CCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEE
T ss_pred CCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEE
Confidence 4566664 4667789999999999999999999999999999875 1222222234456664 788899999999
Q ss_pred EEEeCCCceE-EEEEEEEeccccceeeeccceeEeeCccEEEEEEE-cC-CCCeEEEEECCE-EcCCCCcEEEEEcCcEE
Q psy2775 306 KVTNKEGTVE-SAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEV-TS-DKADVKWFKDGQ-EIKTSKKVTIEKKGTIR 381 (785)
Q Consensus 306 ~~~n~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~-~~~~v~W~~~~~-~l~~~~~~~~~~~~~~~ 381 (785)
.+.|..|... ..+.|.|...+...........+.+|+.+.|.|.+ .+ +.+.+.|++++. .+....+.....++.
T Consensus 95 ~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~-- 172 (404)
T 3p3y_A 95 FARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGD-- 172 (404)
T ss_dssp EEECSSCEEEEEEEEEEECCCCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSC--
T ss_pred EEEcCCCeEeeeeEEEEEeccCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCc--
Confidence 9999988764 56788888765555555566789999999999998 44 678999999874 344444555555554
Q ss_pred EEEEcCCCCCC-ceEEEEEEeccceE-------EEEEEEe------cCCcccccC---CCeEEecCCcEEEEEEEeC-CC
Q psy2775 382 KLLIRNISVHD-EGEYTCSLPDQETS-------AELNVVE------LPPEISVPL---QDVKVSRDEKASFEIELTK-GD 443 (785)
Q Consensus 382 ~l~i~~~~~~d-~G~Y~C~a~n~~~~-------~~~~v~~------~~~~~~~~~---~~~~v~~g~~~~l~C~~~~-~~ 443 (785)
|.|.++...| +|.|+|.+.|..+. ..+.+.. .+|.+..+. ....+.+|+.+.|.|.+.+ +.
T Consensus 173 -l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~ 251 (404)
T 3p3y_A 173 -LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPT 251 (404)
T ss_dssp -EEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSC
T ss_pred -EEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCC
Confidence 9999999999 59999999875432 2233332 233333332 3456889999999999988 67
Q ss_pred ceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEec
Q psy2775 444 ALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPH 522 (785)
Q Consensus 444 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~ 522 (785)
+.+.|++++..+..... .... ....|.|.+++.+|+|.|+|.|.|. |.....+.|.|..+
T Consensus 252 ~~v~W~~~~~~~~~~~~-~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~---------------- 312 (404)
T 3p3y_A 252 PDIAWYKKGGDLPSDKA-KFEN--FNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAA---------------- 312 (404)
T ss_dssp CEEEEEETTBCCCTTTE-EEEG--GGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE----------------
T ss_pred CcEEEEECCEECCCCcc-cccc--cCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCC----------------
Confidence 89999999998865443 2221 2247999999999999999999998 88788888888765
Q ss_pred cCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCC
Q psy2775 523 LGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSS 602 (785)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~ 602 (785)
|.+...+.+..+.+|+.++|.|.+.|+|.|.|.|+|+|..+...
T Consensus 313 ------------------------------------p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 356 (404)
T 3p3y_A 313 ------------------------------------PYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSA 356 (404)
T ss_dssp ------------------------------------EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGS
T ss_pred ------------------------------------CeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCC
Confidence 45555556778899999999999999999999999999999765
Q ss_pred CC-eeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 603 PK-KREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 603 ~~-~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.. ......+ .+|.|.++.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 357 ~~~~~~~~~~--~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~ 402 (404)
T 3p3y_A 357 PPNPNREVAG--DTIIFRDTQI-SSRAVYQCNTSNEHGYLLANAFVSVL 402 (404)
T ss_dssp CCCTTEEEET--TEEEESSCCS-SCCCEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCceEEecC--CEEEEeecCH-HHCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 42 1222223 3699999999 99999999999999999999988875
No 25
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=8.2e-41 Score=358.23 Aligned_cols=363 Identities=21% Similarity=0.298 Sum_probs=281.2
Q ss_pred ccccCCCCeeeecCCceEecCCCeEEEEEEEEe-cCCCeeEEEECCEEccCC--CCEEEeecCCccceEEEEEEccc---
Q psy2775 6 DILEGIPPTFSKKTKPVYAEENSEVTLEVRLVA-VPEPDLLWYYNGEPLQET--DEVVFSDQSDMHSYVSIVTIKSI--- 79 (785)
Q Consensus 6 ~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~--- 79 (785)
......+..|..+|.++.+.+|++++|.|.+.+ .|.+.+.|++++..+... .+.....++ .|.|.++
T Consensus 15 ~~~~~~~~~~~~~P~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~-------~l~i~~~~~~ 87 (403)
T 3laf_A 15 HHGGRRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNG-------SLLIQNILHS 87 (403)
T ss_dssp ----CCSSEEEECCCCEEECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTS-------CEEECSCCCB
T ss_pred ccCCceeEEEEeCCCceEEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCC-------cEEEeeeecc
Confidence 355677889999999999999999999999977 577899999999988643 333333222 2667766
Q ss_pred --CCCCCeEEEEEEEcCCeeE--EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcc
Q psy2775 80 --KKREEGVYTVVAKNREGEA--KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIK 155 (785)
Q Consensus 80 --~~~D~G~Y~C~a~~~~~~~--~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~ 155 (785)
+.+|+|.|+|.|.+..+.. ...+.+.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+.
T Consensus 88 ~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~----~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~ 163 (403)
T 3laf_A 88 RHHKPDEGLYQCEASLGDSGSIISRTAKVMVA----GPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLN 163 (403)
T ss_dssp TTBCSSCEEEEEEEECGGGCEEECCCEEEEEC----CCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCC
T ss_pred CCCCCcceEEEEEEEeCCCccEEEEEEEEEec----CCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEecc
Confidence 7789999999999654433 334555664 46777777788899999999999999999999999999998874
Q ss_pred c---ceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEE-EEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCC
Q psy2775 156 D---RQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE-SAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTG 231 (785)
Q Consensus 156 ~---~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (785)
. ..........+|.|.++..+|+|.|+|.|.|..+... ....+.|...+..
T Consensus 164 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~------------------------- 218 (403)
T 3laf_A 164 PIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGL------------------------- 218 (403)
T ss_dssp CCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCC-------------------------
T ss_pred ccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCc-------------------------
Confidence 2 2222222334799999999999999999999877533 3466666533200
Q ss_pred CCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEccc--ceEEEeCCEEEEEEccCCCCCCeEEEEEEEe
Q psy2775 232 KPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKD--RQITSEKNTHTLTLIQCSTKDKGRYSVKVTN 309 (785)
Q Consensus 232 ~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n 309 (785)
+.++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ...... ....|.|.++..+|+|.|+|.|.|
T Consensus 219 -~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~n 296 (403)
T 3laf_A 219 -HRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLL-GGSNLLISNVTDDDSGTYTCVVTY 296 (403)
T ss_dssp -CEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCSSSSEEEE-TTTEEEECSCCGGGCEEEEEEEEE
T ss_pred -ccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccCCCceEEEC-CccEEEEeCCCHHHCEEEEEEEEc
Confidence 0122345556677788999999999999999999999999988762 112222 234799999999999999999999
Q ss_pred CCCceEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCC
Q psy2775 310 KEGTVESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNI 388 (785)
Q Consensus 310 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~ 388 (785)
..|....++.|.|.. +|.+...+....+.+|+.++|.|.+.+ |.+.++|+++|..+.......+...+ .|.|.++
T Consensus 297 ~~g~~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~---~L~i~~v 372 (403)
T 3laf_A 297 KNENISASAELTVLV-PPWFLNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGS---NLRILGV 372 (403)
T ss_dssp TTEEEEEEEEEEEEE-EEEEEECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCSSSEEEETTT---EEEESSC
T ss_pred CCCceEEEEEEEEEC-CCcEeecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCCCcEEEecCc---cEEEecc
Confidence 999888889999886 555666667778889999999999987 77899999999999877776665444 3999999
Q ss_pred CCCCceEEEEEEeccceEEEEE
Q psy2775 389 SVHDEGEYTCSLPDQETSAELN 410 (785)
Q Consensus 389 ~~~d~G~Y~C~a~n~~~~~~~~ 410 (785)
..+|+|.|+|.|.|..+.....
T Consensus 373 ~~~d~G~Y~C~a~N~~G~~~~~ 394 (403)
T 3laf_A 373 VKSDEGFYQCVAENEAGNAQSS 394 (403)
T ss_dssp CGGGCEEEEEEEEETTEEEEEE
T ss_pred ccccCEEEEEEEEcCCceEEEE
Confidence 9999999999999987766544
No 26
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=354.20 Aligned_cols=384 Identities=13% Similarity=0.155 Sum_probs=233.9
Q ss_pred CCCCeEEEEEEEcCCeeEEE-EeeEEE---e--------CCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEe
Q psy2775 81 KREEGVYTVVAKNREGEAKM-DIPVKV---N--------TGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWY 148 (785)
Q Consensus 81 ~~D~G~Y~C~a~~~~~~~~~-~~~v~v---~--------~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~ 148 (785)
..|.|.|+|...+..+.... ..++.. . ...+..+.++..+..+.+.+|+.+.|.|.+.|.|.+.|.|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v~V~~G~~v~L~C~v~g~P~p~i~W~ 83 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLWV 83 (423)
T ss_dssp ----------------------------------------------------CEEEECSSCCEEEEEECSCCSSCEEEEE
T ss_pred cCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccEEEecCCcEEEEEEEEcCCCCeEEEE
Confidence 46899999999876543322 111111 0 00111223444445889999999999999999999999999
Q ss_pred ECCEEcccceEE--EeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCcccccccee
Q psy2775 149 KDGKLIKDRQIT--SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTL 226 (785)
Q Consensus 149 ~~g~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (785)
+++..+...... ......+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~----------------------- 140 (423)
T 3qs7_E 84 FKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNT----------------------- 140 (423)
T ss_dssp ETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-------------------------
T ss_pred ECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecC-----------------------
Confidence 999876543211 1122457999999999999999999999998888888888632
Q ss_pred eecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEE-ccCCCCCCeEEEE
Q psy2775 227 QVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTL-IQCSTKDKGRYSV 305 (785)
Q Consensus 227 ~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i-~~~~~~d~G~Y~C 305 (785)
|.+. ...+..+..|+.+.|.|.+.|+|.|.|+|++++..+.......... .+.. ..+...|+|.|+|
T Consensus 141 ---------p~~~-~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~--~~~~~~~l~~~d~G~Y~C 208 (423)
T 3qs7_E 141 ---------LLYT-LRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAV--VKKEEKVLHELFGTDIRC 208 (423)
T ss_dssp ------------C-EEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------C--EEECCSEECCCCSSCEEE
T ss_pred ---------cccc-ccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCcccccccccc--ccccceEEecccCeEEEE
Confidence 1111 0111223457778899999999999999999887553111000000 0111 1115789999999
Q ss_pred EEEeCCCceEEE-EEEEEeccccceeeeccceeEeeCccEEEEEEEcC-C-CCeEEEEECCEEcCCCCcEEE--EEcC--
Q psy2775 306 KVTNKEGTVESA-ANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-D-KADVKWFKDGQEIKTSKKVTI--EKKG-- 378 (785)
Q Consensus 306 ~~~n~~g~~~~~-~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~-~~~v~W~~~~~~l~~~~~~~~--~~~~-- 378 (785)
.|.|..|..... +.|.|...+.. .+....+.+|+.+.|.|.+.+ + .+.++|+++|..+.....+.. ...+
T Consensus 209 ~A~N~~G~~~~~~~~l~V~~~p~~---~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~ 285 (423)
T 3qs7_E 209 CARNELGRECTRLFTIDLNQTPQT---TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRT 285 (423)
T ss_dssp EEECSSCEEEEECEEEESSSCCCS---STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETTTE
T ss_pred EEEcCCCCcceeeEEEEEecCCcc---CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCCce
Confidence 999999876543 56666543322 344677899999999999987 4 489999999988765432211 1111
Q ss_pred --cEEEEEEcCCCCCCceEEEEEEecc-ceEEEEEEEecCCcccccC--CCeEEecCCcEEEEEEEeC-CCceEEEEECC
Q psy2775 379 --TIRKLLIRNISVHDEGEYTCSLPDQ-ETSAELNVVELPPEISVPL--QDVKVSRDEKASFEIELTK-GDALVKWYKDG 452 (785)
Q Consensus 379 --~~~~l~i~~~~~~d~G~Y~C~a~n~-~~~~~~~v~~~~~~~~~~~--~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~ 452 (785)
....|.|.++..+|+|.|+|.|.|. .....+.|.. +|.+...+ ....+.+|+.+.|.|.+.+ |.|.|+|+|+|
T Consensus 286 ~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~-~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~k~g 364 (423)
T 3qs7_E 286 MIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVE-KGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR 364 (423)
T ss_dssp EEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEES-SCEEEEC---CEECCCTTCCCCEEEEEEEESCCEEEEEETT
T ss_pred eEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEe-CCcceEcCCCccEEecCCCeEEEEEEEEEcCCCeEEEEECC
Confidence 1235999999999999999999997 2233444544 34443332 3456778999999999998 88999999999
Q ss_pred EEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCc
Q psy2775 453 KEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPA 507 (785)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~ 507 (785)
..+....... .++ ..+.+.....+|+|.|+|.|.|. |....++.|.|...|
T Consensus 365 ~~l~~~~~~~--~~~--~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p 416 (423)
T 3qs7_E 365 KSFPCEQKGL--DNG--YSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGT 416 (423)
T ss_dssp EEEECBCCBC--SSS--SEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----
T ss_pred EECCCccccc--cCC--cEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCC
Confidence 9986543100 000 11222456678999999999998 888889999998875
No 27
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=4.2e-41 Score=359.43 Aligned_cols=352 Identities=22% Similarity=0.336 Sum_probs=268.2
Q ss_pred CCCeeeecCCcceeCCCCeEEEEEEEcc-CCCCeEEEEECCEEcccc--eEEEeCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy2775 234 EKPSILEPLHDVSITEGESAVLSVQVGG-EPSPKVEWYKDGKLIKDR--QITSEKNTHTLTLIQCSTKDKGRYSVKVTNK 310 (785)
Q Consensus 234 ~~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~~~v~W~~~~~~l~~~--~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~ 310 (785)
.+|.|...+....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+... .........+|.|.++..+|+|.|+|.+.|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 84 (395)
T 1bih_A 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETP 84 (395)
T ss_dssp CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeC
Confidence 5688888888889999999999999988 889999999999887622 2334445568999999999999999999998
Q ss_pred CCceEE-EEEEEEeccccceeeeccceeEeeCccEEEEEEE-cC-CCCeEEEEECC---EEcCC----CCcEEEEEcCcE
Q psy2775 311 EGTVES-AANLNVDQGKAEFIKKLDDLEVKERENAVLEVEV-TS-DKADVKWFKDG---QEIKT----SKKVTIEKKGTI 380 (785)
Q Consensus 311 ~g~~~~-~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~-~~-~~~~v~W~~~~---~~l~~----~~~~~~~~~~~~ 380 (785)
.|.... .+.|.+...+. +...+....+.+|+.+.|.|.+ .+ |.+.++|++++ .+... ..++....++.
T Consensus 85 ~g~~~s~~~~l~v~~~~~-p~~~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~- 162 (395)
T 1bih_A 85 AGVASSRVISFRKTYLIA-SPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGN- 162 (395)
T ss_dssp TEEEECCCEEEEEEEEEC-CCCEEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTSC-
T ss_pred CCeEEeEEEEEEEEEeec-CCcCCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcCCCc-
Confidence 776542 25555543221 1223445667899999999996 44 77899999986 22211 33555545554
Q ss_pred EEEEEcCCCCCCce---EEEEEEeccceEEEEEE----E---ec---------CCcccccCCCeEEecCCcEEEEEEEeC
Q psy2775 381 RKLLIRNISVHDEG---EYTCSLPDQETSAELNV----V---EL---------PPEISVPLQDVKVSRDEKASFEIELTK 441 (785)
Q Consensus 381 ~~l~i~~~~~~d~G---~Y~C~a~n~~~~~~~~v----~---~~---------~~~~~~~~~~~~v~~g~~~~l~C~~~~ 441 (785)
|.|.++..+|+| .|+|.|.|..+.....+ . .. +|.+ .+....+.+|+.+.|.|.+.+
T Consensus 163 --L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g 238 (395)
T 1bih_A 163 --LYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGS 238 (395)
T ss_dssp --EEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEEC
T ss_pred --EEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEecc
Confidence 999999999999 99999998665422211 1 10 1111 245677899999999999987
Q ss_pred -CCceEEEEECCEEcccCCCEEEEE--eCcEEEEEEccCCCCCcEEEEEEEeec-Cccee-EEEEEEEcCcccccccCCC
Q psy2775 442 -GDALVKWYKDGKEIAFSENVTLSI--DGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKES-KATLTVEAPAVEFLTKLPS 516 (785)
Q Consensus 442 -~~~~i~W~~~~~~~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~-~~~l~V~~~~~~~~~~~~~ 516 (785)
+.+.+.|+++|..+.......+.. ......|.|.++..+|+|.|+|.|.|. |.... ++.|.|..+
T Consensus 239 ~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~---------- 308 (395)
T 1bih_A 239 NPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSA---------- 308 (395)
T ss_dssp SSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEE----------
T ss_pred CCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcC----------
Confidence 678899999999886544332221 122347999999999999999999998 66555 888888865
Q ss_pred eeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeee-eeeeecCeEEEEEEEecCCCCceEEEeC
Q psy2775 517 VTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEE-KTVKEKGTIRLMAKVKASPAPSIVWFRN 595 (785)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~-~~v~~g~~v~l~C~~~g~P~p~v~W~~~ 595 (785)
|.|...+.. ..+.+|+.++|.|.+.|+|.|.|.|+|+
T Consensus 309 ------------------------------------------P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~ 346 (395)
T 1bih_A 309 ------------------------------------------PKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHN 346 (395)
T ss_dssp ------------------------------------------EEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEET
T ss_pred ------------------------------------------CccccCCCcceEecCCCeEEEEEEECcccCCeeEEEEC
Confidence 444444444 6789999999999999999999999999
Q ss_pred CEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEE
Q psy2775 596 NKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTV 649 (785)
Q Consensus 596 ~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 649 (785)
|..+..+ ++. ..++ +|.|.++.. +|+|.|+|.|.|..|....++.|.|
T Consensus 347 g~~~~~~-~~~--~~~~--~L~i~~~~~-~d~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 347 AKPLSGG-RAT--VTDS--GLVIKGVKN-GDKGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp TEECCSS-SEE--EETT--EEEESSCCS-TTCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEECCCC-ceE--EECC--EEEEeeCCc-ccCEEEEEEEEccCCCceEEEEEEE
Confidence 9998654 332 2233 799999999 9999999999999999999888877
No 28
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.7e-40 Score=356.00 Aligned_cols=364 Identities=20% Similarity=0.337 Sum_probs=272.1
Q ss_pred ccCCCCeeee-cCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCC--CCEEEeecCCccceEEEEEEc----ccC
Q psy2775 8 LEGIPPTFSK-KTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQET--DEVVFSDQSDMHSYVSIVTIK----SIK 80 (785)
Q Consensus 8 ~~~~~p~~~~-~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~----~~~ 80 (785)
....||.|.. .+..+.+.+|++++|.|.+.|.|.+.|.|++++..+... .+..+...++ +|.|. +++
T Consensus 12 ~~~~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~------~l~i~~~~~~~~ 85 (404)
T 3p3y_A 12 ELTQPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSG------TLVIDFRSGGRP 85 (404)
T ss_dssp -CCCCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSC------CCBCCCTTTCCT
T ss_pred hccCCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCc------eEEEEeccCCCC
Confidence 4557888875 578899999999999999999999999999999987543 2222222221 24453 889
Q ss_pred CCCCeEEEEEEEcCCeeEE-EEeeEEEeCCCCCCCce-ecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEc-cc
Q psy2775 81 KREEGVYTVVAKNREGEAK-MDIPVKVNTGKPEKPSI-LEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLI-KD 156 (785)
Q Consensus 81 ~~D~G~Y~C~a~~~~~~~~-~~~~v~v~~~~~~~p~i-~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~-~~ 156 (785)
.+|+|.|+|.|.|..|... ..+.|.|.. +|.+ ........+.+|+.+.|.|.+ .+.|.+.+.|++++... ..
T Consensus 86 ~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~----~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~ 161 (404)
T 3p3y_A 86 EEYEGEYQCFARNKFGTALSNRIRLQVSK----SPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQ 161 (404)
T ss_dssp TSSCEEEEEEEECSSCEEEEEEEEEEECC----CCCCCCCCCCCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCC
T ss_pred ccCCEEEEEEEEcCCCeEeeeeEEEEEec----cCccccCCCCCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCC
Confidence 9999999999999988764 567777763 3332 233455788999999999999 78899999999987443 32
Q ss_pred ceEEEeCCEEEEEEcccCCCC-cEEEEEEEEcCCeeEEE---EEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCC
Q psy2775 157 RQITSEKNTHTLTLIQCSTKD-KGRYSVKVTNKEGTVES---AANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGK 232 (785)
Q Consensus 157 ~~~~~~~~~~~L~i~~~~~~d-~G~Y~C~a~n~~g~~~~---~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (785)
...........|.|.++..+| +|.|+|.|.|..+.... ...+.|.......
T Consensus 162 ~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~------------------------- 216 (404)
T 3p3y_A 162 DKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVA------------------------- 216 (404)
T ss_dssp CSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCC-------------------------
T ss_pred CCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCcc-------------------------
Confidence 222222333479999999999 59999999998775322 2445554221100
Q ss_pred CCCCeeeecC---CcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEe
Q psy2775 233 PEKPSILEPL---HDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTN 309 (785)
Q Consensus 233 ~~~p~~~~~~---~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n 309 (785)
..+|.+..+. ....+.+|+.+.|.|.+.|+|.+.+.|+++|..+.............|.|.++..+|+|.|+|.|.|
T Consensus 217 ~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 296 (404)
T 3p3y_A 217 ERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASN 296 (404)
T ss_dssp CCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEEC
T ss_pred ccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEe
Confidence 0122222221 2356789999999999999999999999999888744334444455899999999999999999999
Q ss_pred CCCceEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCC--cEEEEEcCcEEEEEEc
Q psy2775 310 KEGTVESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSK--KVTIEKKGTIRKLLIR 386 (785)
Q Consensus 310 ~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~--~~~~~~~~~~~~l~i~ 386 (785)
..|.....+.|.|.. +|.+...+....+.+|+.++|.|.+.+ |.+.++|+++|..+.... ......++ .|.|.
T Consensus 297 ~~g~~~~~~~l~V~~-~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~---~L~i~ 372 (404)
T 3p3y_A 297 KMGSIRHTISVRVKA-APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGD---TIIFR 372 (404)
T ss_dssp SSCEEEEEEEEEEEE-EEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGSCCCTTEEEETT---EEEES
T ss_pred CCCcEEEEEEEEEeC-CCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCCCCCceEEecCC---EEEEe
Confidence 999988889999886 455666667788899999999999987 788999999999987554 11122333 49999
Q ss_pred CCCCCCceEEEEEEeccceEEEEE
Q psy2775 387 NISVHDEGEYTCSLPDQETSAELN 410 (785)
Q Consensus 387 ~~~~~d~G~Y~C~a~n~~~~~~~~ 410 (785)
++..+|+|.|+|.|.|..+.....
T Consensus 373 ~v~~~d~G~Y~C~a~N~~G~~~~~ 396 (404)
T 3p3y_A 373 DTQISSRAVYQCNTSNEHGYLLAN 396 (404)
T ss_dssp SCCSSCCCEEEEEEEETTEEEEEE
T ss_pred ecCHHHCEEEEEEEEeCCCcEEEE
Confidence 999999999999999987766543
No 29
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=3.8e-40 Score=350.13 Aligned_cols=354 Identities=19% Similarity=0.307 Sum_probs=271.9
Q ss_pred CCCeeeecCCceEe---cCCCeEEEEEEEEecCCCeeEEEECCEEccCC--CCEEEeecCCccceEEEEEEcccCC-CCC
Q psy2775 11 IPPTFSKKTKPVYA---EENSEVTLEVRLVAVPEPDLLWYYNGEPLQET--DEVVFSDQSDMHSYVSIVTIKSIKK-REE 84 (785)
Q Consensus 11 ~~p~~~~~~~~~~v---~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~-~D~ 84 (785)
.+|.|...|....+ .+|++++|.|.+.|.|.+.+.|++++..+... .++.+. + ..|.|.++.. +|+
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~~~~~~--~------~~L~i~~~~~~~D~ 74 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLV--A------GDLVISNPVKAKDA 74 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEEEEESCCEEEEEETTEECCCSTTSSEEEE--T------TEEEEESCCHHHHC
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEecCCCCCEEEEEECCEECCcCCCccEEee--C------CeEEEecccccccC
Confidence 58999999999887 89999999999999999999999999988654 334332 2 2499999997 999
Q ss_pred eEEEEEEEcCCeeEEE-EeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcc---cceE
Q psy2775 85 GVYTVVAKNREGEAKM-DIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIK---DRQI 159 (785)
Q Consensus 85 G~Y~C~a~~~~~~~~~-~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~---~~~~ 159 (785)
|.|+|.|.|..|.... .+.|.|.. .++..........+.+|+.+.|.|.+ .+.|.+.+.|++++..+. ....
T Consensus 75 G~Y~C~a~n~~g~~~s~~~~l~v~~---~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 151 (382)
T 1cs6_A 75 GSYQCVATNARGTVVSREASLRFGF---LQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRR 151 (382)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEE---ECCCCSSCCCCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSE
T ss_pred EEEEEEEEcCCcEEEecceEEEeec---cccccccCCCceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceE
Confidence 9999999999886543 45565542 11112223456788999999999996 457888999999987643 1222
Q ss_pred EEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEE-----EEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCC
Q psy2775 160 TSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVES-----AANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPE 234 (785)
Q Consensus 160 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-----~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (785)
........|.|.+++.+|+|.|+|.|.|..|.... ...|.|.... ....
T Consensus 152 ~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~--------------------------~~~~ 205 (382)
T 1cs6_A 152 FVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAED--------------------------ARQY 205 (382)
T ss_dssp EECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCC--------------------------CCCE
T ss_pred EEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhh--------------------------cccC
Confidence 23333457999999999999999999987743222 2344443210 0012
Q ss_pred CCeeee-cCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCc
Q psy2775 235 KPSILE-PLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGT 313 (785)
Q Consensus 235 ~p~~~~-~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 313 (785)
+|.+.. .+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ........|.|.++..+|+|.|+|.|.|..|.
T Consensus 206 ~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~---~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 282 (382)
T 1cs6_A 206 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS---KWLSSEPLLHIQNVDFEDEGTYECEAENIKGR 282 (382)
T ss_dssp EEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSC---CCSBSSSEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred CCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccccc---EEecCCcEEEEccCChhhCEEEEEEEEcCCCe
Confidence 344443 34466788999999999999999999999998876643 11234458999999999999999999999999
Q ss_pred eEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCC
Q psy2775 314 VESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHD 392 (785)
Q Consensus 314 ~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d 392 (785)
....+.|.|.. +|.+...+....+..|+.+.|.|.+.+ |.+.++|+++|..+....++.+. ++ .|.|.++..+|
T Consensus 283 ~~~~~~l~V~~-~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~-~~---~L~i~~v~~~d 357 (382)
T 1cs6_A 283 DTYQGRIIIHA-QPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVS-GG---ELRFSKLVLED 357 (382)
T ss_dssp EEEEEEEEEEE-EEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCCSSEEEE-TT---EEEESSCCGGG
T ss_pred EEEEEEEEEec-CCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCCceEEEE-CC---EEEECcCCccc
Confidence 88888898886 455555666778899999999999987 78899999999999887776653 33 39999999999
Q ss_pred ceEEEEEEeccceEEEE
Q psy2775 393 EGEYTCSLPDQETSAEL 409 (785)
Q Consensus 393 ~G~Y~C~a~n~~~~~~~ 409 (785)
+|.|+|.|.|..+....
T Consensus 358 ~G~Y~C~a~N~~G~~~~ 374 (382)
T 1cs6_A 358 SGMYQCVAENKHGTVYA 374 (382)
T ss_dssp CEEEEEEEEETTEEEEE
T ss_pred CEEEEEEEEeCCCeEEE
Confidence 99999999998776543
No 30
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=2.3e-40 Score=352.72 Aligned_cols=342 Identities=20% Similarity=0.337 Sum_probs=260.4
Q ss_pred CCeeeecCCc-ceeCCCCeEEEEEEEccCCCCeEEEEE-CCEEccc---ceEEEeCCEEEEEEccCCCCC------CeEE
Q psy2775 235 KPSILEPLHD-VSITEGESAVLSVQVGGEPSPKVEWYK-DGKLIKD---RQITSEKNTHTLTLIQCSTKD------KGRY 303 (785)
Q Consensus 235 ~p~~~~~~~~-~~~~~G~~~~l~C~~~g~p~~~v~W~~-~~~~l~~---~~~~~~~~~~~l~i~~~~~~d------~G~Y 303 (785)
+|.|...+.. ..+.+|+.++|.|.+.|.|.+.|.|++ +|..+.. ..... ...+|.|.++..+| +|.|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~--~~~~L~i~~~~~~d~~~~~d~G~Y 80 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQIS--SDGKLVFPPFRAEDYRQEVHAQVY 80 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEEC--STTEEEECCCCGGGCCHHHHEEEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEc--CCceEEecccChhhccccccCceE
Confidence 4667766554 457799999999999999999999999 7877652 12222 23479999999987 9999
Q ss_pred EEEEEeCCCceE-EEEEEEEeccccceeeeccceeEeeCccEEEEEEEcCC----CCeEEEEECCEEcCC-----CCcEE
Q psy2775 304 SVKVTNKEGTVE-SAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTSD----KADVKWFKDGQEIKT-----SKKVT 373 (785)
Q Consensus 304 ~C~~~n~~g~~~-~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~----~~~v~W~~~~~~l~~-----~~~~~ 373 (785)
+|.|.|..|... ..+.|.+.. ++.+...+....+.+|+.++|.|.+.+. .+.+.|++++..+.. ..++.
T Consensus 81 ~C~a~n~~g~~~s~~~~v~v~~-~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~ 159 (388)
T 2v5m_A 81 ACLARNQFGSIISRDVHVRAVV-AQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYL 159 (388)
T ss_dssp EEEEEETTEEEECCCEEEEEEC-CCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTTTEE
T ss_pred EEEEEccCCeEEecceEEEEcc-ccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCCcEE
Confidence 999999988643 346666654 4445555667789999999999999763 278999999876632 23454
Q ss_pred EEEcCcEEEEEEcCCCCCCc-eEEEEEEeccc-eEE-------EEEEEecC----Ccc-cccCCCeEEecCCcEEEEEEE
Q psy2775 374 IEKKGTIRKLLIRNISVHDE-GEYTCSLPDQE-TSA-------ELNVVELP----PEI-SVPLQDVKVSRDEKASFEIEL 439 (785)
Q Consensus 374 ~~~~~~~~~l~i~~~~~~d~-G~Y~C~a~n~~-~~~-------~~~v~~~~----~~~-~~~~~~~~v~~g~~~~l~C~~ 439 (785)
+..++. |.|.++..+|+ |.|+|.+.|.. +.. .+.+.... |.+ ........+.+|+.++|.|.+
T Consensus 160 ~~~~~~---L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~ 236 (388)
T 2v5m_A 160 VLPSGE---LHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPA 236 (388)
T ss_dssp ECTTSC---EEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCC
T ss_pred EccCCc---EEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEEC
Confidence 444444 99999999999 99999998753 211 23333221 111 112344568899999999999
Q ss_pred eC-CCceEEEEECCEEc------ccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCccccc
Q psy2775 440 TK-GDALVKWYKDGKEI------AFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFL 511 (785)
Q Consensus 440 ~~-~~~~i~W~~~~~~~------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~ 511 (785)
.+ |.+.+.|++++..+ ....+... .+ ..|.|.++..+|+|.|+|.|.|. |.....+.|.|..+
T Consensus 237 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~-~~---~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~----- 307 (388)
T 2v5m_A 237 QGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQ-VS---GTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP----- 307 (388)
T ss_dssp EEESCCEEEEEEECTTSSCEEECCCSSSEEE-ET---TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE-----
T ss_pred CCCCCCEEEEEecCCCCcccccccccCceec-cc---CEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCC-----
Confidence 88 78899999975322 22233322 12 37999999999999999999998 88888888888865
Q ss_pred ccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceE
Q psy2775 512 TKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIV 591 (785)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~ 591 (785)
|.+...+....+.+|++++|.|.+.|+|.|.|+
T Consensus 308 -----------------------------------------------p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~ 340 (388)
T 2v5m_A 308 -----------------------------------------------LSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVS 340 (388)
T ss_dssp -----------------------------------------------EEEEEESSEEEECTTSCEEEEEEEEEECCCEEE
T ss_pred -----------------------------------------------CccccCCCcEEecCCCCEEEEEEeccccCCeEE
Confidence 333334456788999999999999999999999
Q ss_pred EEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEE
Q psy2775 592 WFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTV 649 (785)
Q Consensus 592 W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 649 (785)
|+|+|..+..+ ..+|.|.++.. +|+|.|+|.|.|..|....++.|.|
T Consensus 341 W~~~g~~i~~~----------~~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 341 WMKDGKAIGHS----------ESVLRIESVKK-EDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EEETTEECSCC----------SSEEEESSCCG-GGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEECCEECccC----------CCEEEEecCCh-hhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 99999988543 24699999999 9999999999999999999888876
No 31
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.4e-39 Score=347.64 Aligned_cols=364 Identities=18% Similarity=0.279 Sum_probs=267.7
Q ss_pred ccCCCCeeeecCCceEecCCCeEEEEEEEEe-cCCCeeEEEECCEEccCCCC-EEEeecCCccceEEEEEEcccCCCCCe
Q psy2775 8 LEGIPPTFSKKTKPVYAEENSEVTLEVRLVA-VPEPDLLWYYNGEPLQETDE-VVFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 8 ~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p~~~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
-+..||.|...|..+.+.+|++++|.|.+.+ .|.+.+.|++++..+..... +.....+ .+|.|.+++.+|+|
T Consensus 2 ~v~~~P~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~------~~L~i~~~~~~D~G 75 (395)
T 1bih_A 2 PVDKYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDE------GSLVFLRPQASDEG 75 (395)
T ss_dssp ---CCCEECCCCSEEEEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTS------CCEEESSCCGGGCE
T ss_pred CcCCCCEeecCCCceEEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCC------ceEEEecCCCCCCc
Confidence 3568999999999999999999999999998 78899999999998876653 2222222 24999999999999
Q ss_pred EEEEEEEcCCeeEEE-EeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECC---EEcc-----
Q psy2775 86 VYTVVAKNREGEAKM-DIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDG---KLIK----- 155 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~-~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g---~~~~----- 155 (785)
.|+|.|.|..|.... .+.|.+... ..|.+ .+....+.+|+.+.|.|.+ .+.|.+.+.|+++| .+..
T Consensus 76 ~Y~C~a~n~~g~~~s~~~~l~v~~~--~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 151 (395)
T 1bih_A 76 HYQCFAETPAGVASSRVISFRKTYL--IASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDF 151 (395)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEEE--ECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCC
T ss_pred EEEEEEEeCCCeEEeEEEEEEEEEe--ecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccc
Confidence 999999998887652 344444321 22333 2235667899999999996 78899999999986 2211
Q ss_pred cceEEEeCCEEEEEEcccCCCCcE---EEEEEEEcCCeeEEEEEEEEeec-CCCCCCCCCCCCCCCccccccceeeecCC
Q psy2775 156 DRQITSEKNTHTLTLIQCSTKDKG---RYSVKVTNKEGTVESAANLNVDP-YEPKESKETPPSPPPYVVSELDTLQVNTG 231 (785)
Q Consensus 156 ~~~~~~~~~~~~L~i~~~~~~d~G---~Y~C~a~n~~g~~~~~~~l~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (785)
....... ...+|.|.++..+|+| .|+|.|.|..|............ ..+... + ..
T Consensus 152 ~~~~~~~-~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~----~----------------~~ 210 (395)
T 1bih_A 152 DRRITAG-PDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNS----G----------------YK 210 (395)
T ss_dssp CTTEEEC-TTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSS----C----------------CC
T ss_pred cccEEEc-CCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccc----c----------------cc
Confidence 1112222 2336999999999999 99999999988644433222211 100000 0 00
Q ss_pred CCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEccc---ceEEE--eCCEEEEEEccCCCCCCeEEEEE
Q psy2775 232 KPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKD---RQITS--EKNTHTLTLIQCSTKDKGRYSVK 306 (785)
Q Consensus 232 ~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~---~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~ 306 (785)
...+|.+ .+....+.+|+.+.|.|.+.|+|.+.+.|+++|..+.. ..+.. ......|.|.++..+|+|.|+|.
T Consensus 211 ~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 288 (395)
T 1bih_A 211 GEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCE 288 (395)
T ss_dssp CCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEE
T ss_pred CCcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEE
Confidence 0122333 24566788999999999999999999999999988762 12221 11233799999999999999999
Q ss_pred EEeCCCceEE-EEEEEEeccccceeeeccc-eeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEE
Q psy2775 307 VTNKEGTVES-AANLNVDQGKAEFIKKLDD-LEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKL 383 (785)
Q Consensus 307 ~~n~~g~~~~-~~~l~v~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l 383 (785)
|.|..|.... ++.|.|.. +|.+...+.. ..+.+|+.+.|.|.+.+ |.+.+.|+++|..+..+ ++.+. ++ .|
T Consensus 289 a~n~~g~~~~~~~~l~V~~-~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~-~~~~~-~~---~L 362 (395)
T 1bih_A 289 VDNGVGKPQKHSLKLTVVS-APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVT-DS---GL 362 (395)
T ss_dssp ECCSSSSCEEEEEEEEEEE-EEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS-SEEEE-TT---EE
T ss_pred EEeCCCCceEEEEEEEEEc-CCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC-ceEEE-CC---EE
Confidence 9999988665 78888886 4455555555 77899999999999987 78899999999998755 44443 33 49
Q ss_pred EEcCCCCCCceEEEEEEeccceEEEEE
Q psy2775 384 LIRNISVHDEGEYTCSLPDQETSAELN 410 (785)
Q Consensus 384 ~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 410 (785)
.|.++..+|+|.|+|.|.|..+.....
T Consensus 363 ~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 389 (395)
T 1bih_A 363 VIKGVKNGDKGYYGCRATNEHGDKYFE 389 (395)
T ss_dssp EESSCCSTTCEEEEEEEEETTEEEEEE
T ss_pred EEeeCCcccCEEEEEEEEccCCCceEE
Confidence 999999999999999999988776544
No 32
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=3e-39 Score=344.14 Aligned_cols=350 Identities=19% Similarity=0.300 Sum_probs=262.0
Q ss_pred CCCeeeecCCc-eEecCCCeEEEEEEEEecCCCeeEEEE-CCEEccCCCCEEEeecCCccceEEEEEEcccCCCC-----
Q psy2775 11 IPPTFSKKTKP-VYAEENSEVTLEVRLVAVPEPDLLWYY-NGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKRE----- 83 (785)
Q Consensus 11 ~~p~~~~~~~~-~~v~~G~~v~l~C~~~g~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D----- 83 (785)
.||.|...|.. +.+.+|++++|.|.+.|.|.+.|.|++ ++..+....+......+ .+|.|.+++.+|
T Consensus 2 ~~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~------~~L~i~~~~~~d~~~~~ 75 (388)
T 2v5m_A 2 KGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSD------GKLVFPPFRAEDYRQEV 75 (388)
T ss_dssp EEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECST------TEEEECCCCGGGCCHHH
T ss_pred CCCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCC------ceEEecccChhhccccc
Confidence 47999988775 678999999999999999999999999 77777654433322222 249999999997
Q ss_pred -CeEEEEEEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCC---CeEEEeECCEEcccc-
Q psy2775 84 -EGVYTVVAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPS---PKVEWYKDGKLIKDR- 157 (785)
Q Consensus 84 -~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~---~~v~W~~~g~~~~~~- 157 (785)
+|.|+|.|.|..|.. +..+.|.+. .+|.+...+....+.+|+.+.|.|.+.+.++ +.+.|++++..+...
T Consensus 76 d~G~Y~C~a~n~~g~~~s~~~~v~v~----~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~ 151 (388)
T 2v5m_A 76 HAQVYACLARNQFGSIISRDVHVRAV----VAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPG 151 (388)
T ss_dssp HEEEEEEEEEETTEEEECCCEEEEEE----CCCCCCCBCCCEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSS
T ss_pred cCceEEEEEEccCCeEEecceEEEEc----cccccccCccceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccc
Confidence 999999999998864 345666665 3555656667788999999999999987653 689999998765321
Q ss_pred -----eEEEeCCEEEEEEcccCCCCc-EEEEEEEEcCCee-EEEE---EEEEeecCCCCCCCCCCCCCCCccccccceee
Q psy2775 158 -----QITSEKNTHTLTLIQCSTKDK-GRYSVKVTNKEGT-VESA---ANLNVDPYEPKESKETPPSPPPYVVSELDTLQ 227 (785)
Q Consensus 158 -----~~~~~~~~~~L~i~~~~~~d~-G~Y~C~a~n~~g~-~~~~---~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (785)
.... ....+|.|.+++.+|+ |.|+|.|.|..+. ...+ ..|.|......
T Consensus 152 ~~~~~~~~~-~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~--------------------- 209 (388)
T 2v5m_A 152 AEYDGKYLV-LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISS--------------------- 209 (388)
T ss_dssp SCBTTTEEE-CTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSC---------------------
T ss_pred cCCCCcEEE-ccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcC---------------------
Confidence 1111 1224799999999999 9999999987643 2222 24555422100
Q ss_pred ecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcc-------cceEEEeCCEEEEEEccCCCCCC
Q psy2775 228 VNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIK-------DRQITSEKNTHTLTLIQCSTKDK 300 (785)
Q Consensus 228 ~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~-------~~~~~~~~~~~~l~i~~~~~~d~ 300 (785)
..|..|.+. .....+.+|+.+.|.|.+.|+|.+.+.|++++..+. ....... ...|.|.++..+|+
T Consensus 210 ---~~p~~~~~~--~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~ 282 (388)
T 2v5m_A 210 ---SAPRTPALV--QKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQV--SGTLIIKDAVVEDS 282 (388)
T ss_dssp ---EEEECCSSC--CCCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEE--TTEEEESSCCGGGC
T ss_pred ---CCCcCcccc--CCceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCcccccccccCceecc--cCEEEECcCCHHHC
Confidence 000001111 123456789999999999999999999999753322 1112222 23799999999999
Q ss_pred eEEEEEEEeCCCceEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCc
Q psy2775 301 GRYSVKVTNKEGTVESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGT 379 (785)
Q Consensus 301 G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~ 379 (785)
|.|+|.|.|..|.....+.|.|.. ++.+...+....+.+|+.+.|.|.+.+ |.+.++|+++|..+....
T Consensus 283 G~Y~C~a~n~~g~~~~~~~l~V~~-~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~~--------- 352 (388)
T 2v5m_A 283 GKYLCVVNNSVGGESVETVLTVTA-PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE--------- 352 (388)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEEE-EEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCCS---------
T ss_pred eEEEEEEecCCCceeEEEEEEEeC-CCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccCC---------
Confidence 999999999999988888999886 444555566778899999999999987 788999999999886542
Q ss_pred EEEEEEcCCCCCCceEEEEEEeccceEEEEE
Q psy2775 380 IRKLLIRNISVHDEGEYTCSLPDQETSAELN 410 (785)
Q Consensus 380 ~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 410 (785)
..|.|.++..+|+|.|+|.|.|..+.....
T Consensus 353 -~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~ 382 (388)
T 2v5m_A 353 -SVLRIESVKKEDKGMYQCFVRNDRESAEAS 382 (388)
T ss_dssp -SEEEESSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred -CEEEEecCChhhCEEEEEEEEcCCCcEEEE
Confidence 249999999999999999999987766544
No 33
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=6.5e-36 Score=303.37 Aligned_cols=274 Identities=22% Similarity=0.408 Sum_probs=234.1
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+....++.+....+ ...|+|.+++.+|+|.|+|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C 78 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVEN----TATLTVLKVTKGDAGQYTC 78 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETT----EEEEEESSCCGGGCEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCC----EEEEEEecCCcccCEEEEE
Confidence 368999999999999999999999999999999999999999998877766554332 2569999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCceecCC-CceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEEEeCCE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSILEPL-HDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QITSEKNT 165 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~-~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~~~~~~ 165 (785)
.|.|..+.....+.|.|. .+|.+.... ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+... ........
T Consensus 79 ~~~n~~g~~~~~~~l~V~----~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~ 154 (284)
T 2rik_A 79 YASNVAGKDSCSAQLGVQ----EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESV 154 (284)
T ss_dssp EEEETTEEEEEEEEEEEE----CCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTE
T ss_pred EEEECCceEEEEEEEEcc----CCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCE
Confidence 999999988888888887 466655443 4566889999999999999999999999999988654 23345567
Q ss_pred EEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcc
Q psy2775 166 HTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDV 245 (785)
Q Consensus 166 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 245 (785)
..|.|.+++.+|+|.|+|.|.|..|.....+.|.|.. +|.+...+...
T Consensus 155 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~--------------------------------~p~~~~~~~~~ 202 (284)
T 2rik_A 155 AVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE--------------------------------PPVFRKKPHPV 202 (284)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC--------------------------------CCBCCSCCCCE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEec--------------------------------CCcceeCCCcc
Confidence 8899999999999999999999999988888888873 34555555566
Q ss_pred eeCCCCeEEEEEEEccCCCCeEEEEECCEEcc---cceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEE
Q psy2775 246 SITEGESAVLSVQVGGEPSPKVEWYKDGKLIK---DRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 322 (785)
Q Consensus 246 ~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 322 (785)
.+.+|+.+.|.|.+.|+|.+.+.|++++..+. ...+...+....|.|.++..+|.|.|+|.|.|..|....++.|.|
T Consensus 203 ~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 282 (284)
T 2rik_A 203 ETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITL 282 (284)
T ss_dssp EECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEE
Confidence 78899999999999999999999999999887 334455566779999999999999999999999999998888887
Q ss_pred e
Q psy2775 323 D 323 (785)
Q Consensus 323 ~ 323 (785)
.
T Consensus 283 ~ 283 (284)
T 2rik_A 283 K 283 (284)
T ss_dssp C
T ss_pred c
Confidence 5
No 34
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.3e-35 Score=301.19 Aligned_cols=272 Identities=23% Similarity=0.412 Sum_probs=231.1
Q ss_pred cccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEecc
Q psy2775 325 GKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQ 403 (785)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 403 (785)
.||.+...+....+.+|+.++|.|.+.+ +.+.++|++++..+....++.+...+....|.|.++..+|+|.|+|.+.|.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~ 83 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 83 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEEC
Confidence 3566777777888999999999999987 678999999999998887777766666677999999999999999999986
Q ss_pred ceEE----EEEEEecCCcccc-cCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccC
Q psy2775 404 ETSA----ELNVVELPPEISV-PLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSA 477 (785)
Q Consensus 404 ~~~~----~~~v~~~~~~~~~-~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 477 (785)
.+.. .+.|.. +|.+.. ......+.+|+.+.|.|.+.+ +.+.+.|++++..+....+..+...+....|.|.++
T Consensus 84 ~g~~~~~~~l~V~~-~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 162 (284)
T 2rik_A 84 AGKDSCSAQLGVQE-PPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNL 162 (284)
T ss_dssp TEEEEEEEEEEEEC-CCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSC
T ss_pred CceEEEEEEEEccC-CCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCC
Confidence 5543 344444 444443 344556889999999999998 788999999999998888888877777889999999
Q ss_pred CCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCC
Q psy2775 478 GLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPG 556 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 556 (785)
+.+|+|.|+|.|.|. |....++.|.|..+|
T Consensus 163 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p------------------------------------------------- 193 (284)
T 2rik_A 163 SVEDSGDYTCEAHNAAGSASSSTSLKVKEPP------------------------------------------------- 193 (284)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEECCC-------------------------------------------------
T ss_pred CcccCEEEEEEEEcCCCceeEEEEEEEecCC-------------------------------------------------
Confidence 999999999999998 888888899988763
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+...+....+.+|+.++|.|.+.|+|.|.|.|+|++..+..+.++.+..++....|.|.++.. +|+|.|+|.|.|
T Consensus 194 ---~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~N 269 (284)
T 2rik_A 194 ---VFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDS-ADIGEYQCKASN 269 (284)
T ss_dssp ---BCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCG-GGCEEEEEEEEE
T ss_pred ---cceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCc-ccCEEEEEEEEe
Confidence 2333334557889999999999999999999999999999988888888888888999999999 999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
..|....++.|.|+
T Consensus 270 ~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 270 DVGSYTCVGSITLK 283 (284)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEc
Confidence 99999999988875
No 35
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=7.8e-37 Score=321.70 Aligned_cols=300 Identities=15% Similarity=0.150 Sum_probs=231.0
Q ss_pred ceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcC--------------CCCcEEEEE---cCcEEEEEEcCCCCCCceEE
Q psy2775 335 DLEVKERENAVLEVEVTS-DKADVKWFKDGQEIK--------------TSKKVTIEK---KGTIRKLLIRNISVHDEGEY 396 (785)
Q Consensus 335 ~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~--------------~~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y 396 (785)
.+.+.+|+.++|.|.+.+ +.+.+.|++++..+. ...++.+.. .+....|.|.++..+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 356789999999999986 678999999985321 112333221 11233499999999999999
Q ss_pred EEEEeccceEEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEc
Q psy2775 397 TCSLPDQETSAELNVVELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIF 475 (785)
Q Consensus 397 ~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 475 (785)
+|.|.|..+...+.|... ...+. ..+.+|+.++|.|.+.+ +.+.+.|++++..+. .. ...|.|.
T Consensus 83 ~C~~~n~~~~~~l~V~~~----~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~-------~~---~~~L~i~ 147 (363)
T 1wio_A 83 ICEVEDQKEEVQLLVFGL----TANSD-THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------QG---GKTLSVS 147 (363)
T ss_dssp EEEETTEEEEEEEEEEEE----EESSC-SSEESBSCEEEEEECCTTCCCCEEEECSSSCEE-------EE---SSEEEEC
T ss_pred EEEEEECCCcEEEEEEeC----CCCCc-eEEecCCCEEEEEEcCCCCCCeEEEEcCCCccc-------cc---ceEEEEe
Confidence 999999988888887652 22222 35789999999999977 678899999876541 11 2379999
Q ss_pred cCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCC
Q psy2775 476 SAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGS 554 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 554 (785)
+++.+|+|.|+|.|.|. +.....+.|.|..++.
T Consensus 148 ~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~---------------------------------------------- 181 (363)
T 1wio_A 148 QLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK---------------------------------------------- 181 (363)
T ss_dssp SBCGGGCEECEEEEEETTEEEEECCEECEECCSC----------------------------------------------
T ss_pred eCChhcCCEEEEEEecCCCeEEEEEEEEEecCCC----------------------------------------------
Confidence 99999999999999996 4444555666664421
Q ss_pred CCCCCeEeeeeeeeeeeecCeEEEEEEEec-----CCCCceEEEeCCEEecC--------CCCeeEEe----------eC
Q psy2775 555 PGQAPLFIERFEEKTVKEKGTIRLMAKVKA-----SPAPSIVWFRNNKPLLS--------SPKKREIF----------DG 611 (785)
Q Consensus 555 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-----~P~p~v~W~~~~~~i~~--------~~~~~~~~----------~~ 611 (785)
. +....+.+|+.++|.|.+.| +|.|.|+|+++|..+.. +.++.+.. .+
T Consensus 182 ------~---~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (363)
T 1wio_A 182 ------A---SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKK 252 (363)
T ss_dssp ------S---EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSS
T ss_pred ------C---CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhcccC
Confidence 0 02557889999999998888 88999999999998865 33333322 33
Q ss_pred CeEEEEEccCCCCCCceeEEEEEEcC--CcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCc
Q psy2775 612 ENIILELKEADSETDAGDYKVVATNE--LGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKP 689 (785)
Q Consensus 612 ~~~~L~i~~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (785)
+..+|.|.++.. +|+|.|+|.|.|. .|....++.|.|..
T Consensus 253 ~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~-------------------------------------- 293 (363)
T 1wio_A 253 LPLHLTLPQALP-QYAGSGNLTLALEAKTGKLHQEVNLVVMR-------------------------------------- 293 (363)
T ss_dssp SSCEEEESSBCG-GGCEEEEEEECBTTTTCCEEEEEEEEEEE--------------------------------------
T ss_pred CceEEEEccCCc-CcCcEEEEEEEEhhhcCeEEEEEeEEEEE--------------------------------------
Confidence 355899999999 9999999999999 99888888887751
Q ss_pred cccCCCcCCCCCCcEEeecCCeEEEEEEEecCCCCc--eEEeECCEEeeeccccccchhhhcccccceeeeeeceEEEEE
Q psy2775 690 VETAPVIDPPPPPEVLVKKGEDLKIEVRFKALPPPK--AEWTVNGTVIVPSKRVKGKAEFIKKLDDLEVKERENAVLEVE 767 (785)
Q Consensus 690 ~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~P~p~--i~W~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~c~ 767 (785)
..|+.++|.|.+.|.|+|. |.|+++|..+..+. .|.+..+...|+|.|+|.
T Consensus 294 -----------------v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~~~----------~l~i~~v~~~d~G~Y~C~ 346 (363)
T 1wio_A 294 -----------------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSK----------REKAVWVLNPEAGMWQCL 346 (363)
T ss_dssp -----------------ECCCSSSEEEEEESSCCTTCCEEEECSSSSCSEEE----------SSSEEEESSCCSEEEEEE
T ss_pred -----------------ecCCCeeEEEEEccccCCCccEEEEeCCCceeeee----------eeeeeeeccccceeEEEE
Confidence 1188899999999999998 99999998887543 466788899999999999
Q ss_pred Eec
Q psy2775 768 VTS 770 (785)
Q Consensus 768 ~~~ 770 (785)
+++
T Consensus 347 a~~ 349 (363)
T 1wio_A 347 LSD 349 (363)
T ss_dssp ECS
T ss_pred Eec
Confidence 985
No 36
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=6.7e-36 Score=323.73 Aligned_cols=360 Identities=14% Similarity=0.163 Sum_probs=245.9
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecCC----CeeEEEECC--EEc------------cCCCCEEEeecCCccceEEEEE
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVPE----PDLLWYYNG--EPL------------QETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~----~~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~L~ 75 (785)
.|...|..+.+.+|++++|.|.+.+.+. +.|.|++++ ..+ ....++.+...+ ...+|+
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~ 78 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSR----TDFTLT 78 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEET----TEEEEE
T ss_pred ceEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccC----CcEEEE
Confidence 4677789999999999999999988776 489999963 211 012344443322 125699
Q ss_pred EcccCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCC-eEEEeECCE
Q psy2775 76 IKSIKKREEGVYTVVAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVEWYKDGK 152 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~W~~~g~ 152 (785)
|.+++.+|+|.|+|.|.|..+.. .....|.|.. ...+|.+...........|+.+.|.|.+.| .|.+ .|+|++||.
T Consensus 79 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~-~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~ 157 (438)
T 1qgc_4 79 IDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKR-ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 157 (438)
T ss_dssp ESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECC-CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTE
T ss_pred eCCCcCcCCeeEEEEEecCCCccccCceeEEecC-CCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCE
Confidence 99999999999999999987632 2334566632 223666665333334456889999999977 6766 899999999
Q ss_pred EcccceEE-E-----eCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccc
Q psy2775 153 LIKDRQIT-S-----EKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSE 222 (785)
Q Consensus 153 ~~~~~~~~-~-----~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 222 (785)
.+...... . .++ ...|.|.++..+|+|.|+|.|.|..+.... .+.+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~--~~~~~~~------------------- 216 (438)
T 1qgc_4 158 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI--VKSFNRN------------------- 216 (438)
T ss_dssp EECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCE--EEEEETT-------------------
T ss_pred EcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCce--ecccccc-------------------
Confidence 88765111 0 111 357999999999999999999998876422 2333211
Q ss_pred cceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCC--CCeEEEEEC--CEEcc--------------------c
Q psy2775 223 LDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEP--SPKVEWYKD--GKLIK--------------------D 278 (785)
Q Consensus 223 ~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~l~--------------------~ 278 (785)
.++..+..+....+.+|+.++|.|.+.|.| .+.+.|+++ +..+. .
T Consensus 217 -----------~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r 285 (438)
T 1qgc_4 217 -----------ECEVMLVESGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGR 285 (438)
T ss_dssp -----------C-CCEEEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTT
T ss_pred -----------cceeEEecCCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCc
Confidence 111223334466788999999999999988 679999996 43321 1
Q ss_pred ceEEEe--CCEEEEEEccCCCCCCeEEEEEEEeCCC-----ceEEEEEEEEec---cccceeeeccceeEeeCccEEEEE
Q psy2775 279 RQITSE--KNTHTLTLIQCSTKDKGRYSVKVTNKEG-----TVESAANLNVDQ---GKAEFIKKLDDLEVKERENAVLEV 348 (785)
Q Consensus 279 ~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~~~n~~g-----~~~~~~~l~v~~---~~~~~~~~~~~~~~~~g~~~~l~C 348 (785)
..+... .....|.|.+++.+|+|.|+|.|.|..+ .......|.|.. .+|.+........+.+|+.++|.|
T Consensus 286 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C 365 (438)
T 1qgc_4 286 FTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVTLGC 365 (438)
T ss_dssp EEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEEEEE
T ss_pred EEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEEEEE
Confidence 111111 3466899999999999999999998543 222345677763 223332222233466899999999
Q ss_pred EEcC--CCC-eEEEEECCEEcCCCCcEEEEEcCc---EEEEEEcCCCCCCceEEEEEEeccceEEEEEE
Q psy2775 349 EVTS--DKA-DVKWFKDGQEIKTSKKVTIEKKGT---IRKLLIRNISVHDEGEYTCSLPDQETSAELNV 411 (785)
Q Consensus 349 ~~~~--~~~-~v~W~~~~~~l~~~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~~v 411 (785)
.+.+ |.+ .++|+++|..+.......+...+. .+.|.|.++..+| |.|+|.|.|..+...+..
T Consensus 366 ~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~ 433 (438)
T 1qgc_4 366 LVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 433 (438)
T ss_dssp EEESCBSSCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEE
T ss_pred EeccccCCCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceee
Confidence 9987 445 999999998765321111122332 2358999998888 999999999877655443
No 37
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=4.6e-36 Score=325.04 Aligned_cols=359 Identities=14% Similarity=0.169 Sum_probs=247.5
Q ss_pred eeecCCcceeCCCCeEEEEEEEccCCC----CeEEEEECC--EEc--------------c-cceEEEeCCEEEEEEccCC
Q psy2775 238 ILEPLHDVSITEGESAVLSVQVGGEPS----PKVEWYKDG--KLI--------------K-DRQITSEKNTHTLTLIQCS 296 (785)
Q Consensus 238 ~~~~~~~~~~~~G~~~~l~C~~~g~p~----~~v~W~~~~--~~l--------------~-~~~~~~~~~~~~l~i~~~~ 296 (785)
+...+....+.+|+.+.|.|.+.+.|. +.+.|++++ ..+ . ...........+|.|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVE 83 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCC
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCc
Confidence 445566778899999999999988876 489999963 221 1 1222334567789999999
Q ss_pred CCCCeEEEEEEEeCCCce-EEEEEEEEec--cccceeeeccceeEeeCccEEEEEEEcC--CCC-eEEEEECCEEcCCCC
Q psy2775 297 TKDKGRYSVKVTNKEGTV-ESAANLNVDQ--GKAEFIKKLDDLEVKERENAVLEVEVTS--DKA-DVKWFKDGQEIKTSK 370 (785)
Q Consensus 297 ~~d~G~Y~C~~~n~~g~~-~~~~~l~v~~--~~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~~-~v~W~~~~~~l~~~~ 370 (785)
.+|+|.|+|.|.|..+.. ...+.|.|.. .+|.+..........+|+.+.|.|.+.+ |.+ .++|+++|..+....
T Consensus 84 ~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~ 163 (438)
T 1qgc_4 84 ADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV 163 (438)
T ss_dssp GGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred CcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCc
Confidence 999999999999987643 2335666653 2333333222223346889999999976 445 899999999887652
Q ss_pred cE--EEE--EcCc---EEEEEEcCCCCCCceEEEEEEeccceE--EEEEEEec-CCcccccCCCeEEecCCcEEEEEEEe
Q psy2775 371 KV--TIE--KKGT---IRKLLIRNISVHDEGEYTCSLPDQETS--AELNVVEL-PPEISVPLQDVKVSRDEKASFEIELT 440 (785)
Q Consensus 371 ~~--~~~--~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~~--~~~~v~~~-~~~~~~~~~~~~v~~g~~~~l~C~~~ 440 (785)
.. ... .++. .+.|.|.++..+|+|.|+|.|.|..+. ....+... ++.....+....+.+|+.++|.|.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~ 243 (438)
T 1qgc_4 164 LNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTAS 243 (438)
T ss_dssp EEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEE
T ss_pred eeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEEEEEEc
Confidence 11 111 1111 246999999999999999999997665 33333222 12222345567789999999999999
Q ss_pred C-C--CceEEEEEC--CEEcc-----------------cCCCEEEEEe--CcEEEEEEccCCCCCcEEEEEEEeec-C--
Q psy2775 441 K-G--DALVKWYKD--GKEIA-----------------FSENVTLSID--GKKQKLIIFSAGLEDAGEYSCRVGDT-G-- 493 (785)
Q Consensus 441 ~-~--~~~i~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~n~-g-- 493 (785)
+ + .+.+.|+|+ +..+. ...++.+..+ +....|.|.+++.+|+|.|+|.|.|. +
T Consensus 244 g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 323 (438)
T 1qgc_4 244 GFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDE 323 (438)
T ss_dssp SSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCC
T ss_pred ccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCc
Confidence 7 4 468999996 44332 2356666654 34678999999999999999999984 3
Q ss_pred ---cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeee
Q psy2775 494 ---DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTV 570 (785)
Q Consensus 494 ---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 570 (785)
.......|.|...+. .+|.+........+
T Consensus 324 ~~~~~~~~~~l~V~~~~~------------------------------------------------~~P~v~~~~~~~~~ 355 (438)
T 1qgc_4 324 GFAYWGQGTVVTVSAAKT------------------------------------------------TPPSVYPLAPGSAA 355 (438)
T ss_dssp CCCSBCCCEEEEECSSCC------------------------------------------------BCCEEEEECCCGGG
T ss_pred cceeeCCCEEEEEecCCC------------------------------------------------CCCeEEEcCccccc
Confidence 222456677764210 01333333223456
Q ss_pred eecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeCCe----EEEEEccCCCCCCceeEEEEEEcCCcceEEE
Q psy2775 571 KEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDGEN----IILELKEADSETDAGDYKVVATNELGSATHG 644 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~~~----~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~ 644 (785)
.+|+.++|.|.+.|+ |.| .|.|+|+|..+.......+ ..++. ++|.|.++.. +| |.|+|.|.|..|.....
T Consensus 356 ~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~-~~~g~~~~~s~L~i~~~~~-~d-g~Y~C~a~n~~g~~~~~ 432 (438)
T 1qgc_4 356 AAASMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAV-LQSDLYTLSSSVTVPSSTW-PS-ETVTCNVAHPASSTKVD 432 (438)
T ss_dssp CCSSEEEEEEEEESCBSSCCEEEEGGGTCCSSEEECCCE-EETTEEEEEEEEEEEEEHH-HH-SCCEEEEEEGGGTEEEE
T ss_pred ccCCcEEEEEEeccccCCCcEEEEecCCCCCceeecCcc-ccCCcEEEEEEEEEehhhc-CC-ceEEEEEEeCCCCccee
Confidence 789999999999998 888 9999999988753211111 12222 3699999887 78 99999999999987665
Q ss_pred EEE
Q psy2775 645 ARV 647 (785)
Q Consensus 645 ~~l 647 (785)
..|
T Consensus 433 ~~i 435 (438)
T 1qgc_4 433 KKI 435 (438)
T ss_dssp EEC
T ss_pred eec
Confidence 554
No 38
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=297.52 Aligned_cols=282 Identities=21% Similarity=0.331 Sum_probs=216.3
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCC-CCCeEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKK-REEGVYT 88 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~ 88 (785)
..||.|...|.++.+.+|++++|.|.+.|.|.+.|.|++++..+... +..+....+. ..+.|.|.+++. +|+|.|+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~--~~~~L~i~~~~~~~D~G~Y~ 80 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQ-RFETIEFDES--AGAVLRIQPLRTPRDENVYE 80 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CT-TEEEEEETTT--TEEEEEECSCCTTTTCSEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCC-ceEEEEecCC--CceEEEEecccccCCCeEEE
Confidence 57999999999999999999999999999999999999999887543 4433322211 125699999998 9999999
Q ss_pred EEEEcCCeeEEEEeeEEEeCCCC---CCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccce---EEEe
Q psy2775 89 VVAKNREGEAKMDIPVKVNTGKP---EKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ---ITSE 162 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~~~~---~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~---~~~~ 162 (785)
|.|.|..|.....+.|.|..... ..|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+.... ....
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~ 160 (304)
T 2yd9_A 81 CVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQ 160 (304)
T ss_dssp EEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEE
T ss_pred EEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEe
Confidence 99999999887788888874321 22677777778889999999999999999999999999999886541 1112
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE-EEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeec
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEP 241 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 241 (785)
.....|.|.+++.+|+|.|+|.|.|..|..... ..+.|.... .+|.+...
T Consensus 161 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~-----------------------------~~P~~~~~ 211 (304)
T 2yd9_A 161 LRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQN-----------------------------VAPRFSIL 211 (304)
T ss_dssp CTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCC-----------------------------EEEEEEEC
T ss_pred CCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeec-----------------------------cCCcEEec
Confidence 223379999999999999999999999876644 566665321 34666666
Q ss_pred CCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEE
Q psy2775 242 LHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLN 321 (785)
Q Consensus 242 ~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~ 321 (785)
+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+..... ...+...|.|.++ +|+|.|+|.|.|..|....++.|.
T Consensus 212 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~-~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~ 288 (304)
T 2yd9_A 212 PMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDD-MPVGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQIT 288 (304)
T ss_dssp CCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSS-CCBSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC
T ss_pred CCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCccc-ccCCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEE
Confidence 6677889999999999999999999999999998863221 1234556888776 589999999999999999999999
Q ss_pred Eeccc
Q psy2775 322 VDQGK 326 (785)
Q Consensus 322 v~~~~ 326 (785)
|...+
T Consensus 289 V~~~~ 293 (304)
T 2yd9_A 289 VKSLP 293 (304)
T ss_dssp -----
T ss_pred EecCc
Confidence 88643
No 39
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=7.9e-36 Score=314.02 Aligned_cols=304 Identities=15% Similarity=0.202 Sum_probs=228.4
Q ss_pred ceeCCCCeEEEEEEEccCCCCeEEEEECCEEcc---------------cceEEE-----eCCEEEEEEccCCCCCCeEEE
Q psy2775 245 VSITEGESAVLSVQVGGEPSPKVEWYKDGKLIK---------------DRQITS-----EKNTHTLTLIQCSTKDKGRYS 304 (785)
Q Consensus 245 ~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~---------------~~~~~~-----~~~~~~l~i~~~~~~d~G~Y~ 304 (785)
+.+.+|+.+.|.|.+.+.|.+.+.|++++..+. ..++.. ......|.|.+++.+|+|.|+
T Consensus 4 v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 83 (363)
T 1wio_A 4 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 83 (363)
T ss_dssp EEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEE
Confidence 457789999999999999999999999985321 011111 224567999999999999999
Q ss_pred EEEEeCCCceEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEEEcCcEEEE
Q psy2775 305 VKVTNKEGTVESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIEKKGTIRKL 383 (785)
Q Consensus 305 C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l 383 (785)
|.+.|.. ..+.|.|... . ......+.+|+.++|.|.+.+ |.+.++|++++..+ ....+ .|
T Consensus 84 C~~~n~~----~~~~l~V~~~----~-~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~-------~~~~~---~L 144 (363)
T 1wio_A 84 CEVEDQK----EEVQLLVFGL----T-ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN-------IQGGK---TL 144 (363)
T ss_dssp EEETTEE----EEEEEEEEEE----E-ESSCSSEESBSCEEEEEECCTTCCCCEEEECSSSCE-------EEESS---EE
T ss_pred EEEEECC----CcEEEEEEeC----C-CCCceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcc-------cccce---EE
Confidence 9998863 3566666641 1 122346789999999999976 67899999987543 11222 49
Q ss_pred EEcCCCCCCceEEEEEEeccceEEEEE----EEecCCcccccCCCeEEecCCcEEEEEEEeC------CCceEEEEECCE
Q psy2775 384 LIRNISVHDEGEYTCSLPDQETSAELN----VVELPPEISVPLQDVKVSRDEKASFEIELTK------GDALVKWYKDGK 453 (785)
Q Consensus 384 ~i~~~~~~d~G~Y~C~a~n~~~~~~~~----v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~------~~~~i~W~~~~~ 453 (785)
.|.++..+|+|.|+|.|.|..+..... |.. +|.. +....+.+|+.+.|.|.+.+ |.+.+.|+++|.
T Consensus 145 ~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~-~p~~---~~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~ 220 (363)
T 1wio_A 145 SVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA-FQKA---SSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERA 220 (363)
T ss_dssp EECSBCGGGCEECEEEEEETTEEEEECCEECEEC-CSCS---EEEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSC
T ss_pred EEeeCChhcCCEEEEEEecCCCeEEEEEEEEEec-CCCC---CCceEEecCCEEEEEEEEecccccCCCceeEEEecCCC
Confidence 999999999999999999876655443 222 2222 25566889999999998876 246799999998
Q ss_pred Eccc--------CCCEEEEE----------eCcEEEEEEccCCCCCcEEEEEEEeec---CcceeEEEEEEEcCcccccc
Q psy2775 454 EIAF--------SENVTLSI----------DGKKQKLIIFSAGLEDAGEYSCRVGDT---GDKESKATLTVEAPAVEFLT 512 (785)
Q Consensus 454 ~~~~--------~~~~~~~~----------~~~~~~L~i~~~~~~d~G~Y~C~a~n~---g~~~~~~~l~V~~~~~~~~~ 512 (785)
.+.. ...+.+.. .+....|+|.++..+|+|.|+|.|.|. |.....+.|.|...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v------ 294 (363)
T 1wio_A 221 SSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA------ 294 (363)
T ss_dssp CCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE------
T ss_pred CccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe------
Confidence 8765 44444432 222448999999999999999999997 55555666666511
Q ss_pred cCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCc--e
Q psy2775 513 KLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPS--I 590 (785)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~--v 590 (785)
.|++++|.|.+.|.|+|. |
T Consensus 295 -----------------------------------------------------------~g~~~~l~C~~~g~p~p~~~i 315 (363)
T 1wio_A 295 -----------------------------------------------------------TQLQKNLTCEVWGPTSPKLML 315 (363)
T ss_dssp -----------------------------------------------------------CCCSSSEEEEEESSCCTTCCE
T ss_pred -----------------------------------------------------------cCCCeeEEEEEccccCCCccE
Confidence 178899999999999998 9
Q ss_pred EEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEE
Q psy2775 591 VWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTV 649 (785)
Q Consensus 591 ~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 649 (785)
.|+|+|..+.. ...|.|.++.. +|+|.|+|.|.|. |....+..|.|
T Consensus 316 ~W~~~~~~~~~-----------~~~l~i~~v~~-~d~G~Y~C~a~~~-~~~~~~~~~~V 361 (363)
T 1wio_A 316 SLKLENKEAKV-----------SKREKAVWVLN-PEAGMWQCLLSDS-GQVLLESNIKV 361 (363)
T ss_dssp EEECSSSSCSE-----------EESSSEEEESS-CCSEEEEEEECSS-SSCCEEEEEEE
T ss_pred EEEeCCCceee-----------eeeeeeeeecc-ccceeEEEEEecC-CeEEEecceEe
Confidence 99999987753 23377889998 9999999999975 66666777766
No 40
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=286.16 Aligned_cols=275 Identities=21% Similarity=0.367 Sum_probs=212.9
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEE-CCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYY-NGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
.+|.|...+.++.+.+|++++|.|.+.|.|. .+.|++ ++..+....++.+..++. .++|.|.+++.+|+|.|+|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C 77 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGV----RSRLTIYNANIEDAGIYRC 77 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETT----EEEEEECSCCGGGCEEEEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCC----EEEEEEccCCcccCEEEEE
Confidence 5899999999999999999999999998775 899999 677777777776665442 2569999999999999999
Q ss_pred EEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEEEeCCE
Q psy2775 90 VAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QITSEKNT 165 (785)
Q Consensus 90 ~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~~~~~~ 165 (785)
.+.|..+.. ...+.|.|. .+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+... .... ...
T Consensus 78 ~~~n~~g~~~~~~~~l~v~----~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~~~ 152 (291)
T 2wim_A 78 QATDAKGQTQEATVVLEIY----QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAM-LAN 152 (291)
T ss_dssp EEECSSSCEEEEEEEEEEE----CCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEE-CTT
T ss_pred EEecccCceEEEEEEEEec----CCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEE-ccC
Confidence 999988765 456667776 4666666667788999999999999999999999999999877532 2222 223
Q ss_pred EEEEEcccCCCCcEEEEEEEEcCCeeEE--EEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCC
Q psy2775 166 HTLTLIQCSTKDKGRYSVKVTNKEGTVE--SAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLH 243 (785)
Q Consensus 166 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 243 (785)
.+|.|.++..+|+|.|+|.|.|..+... ..+.+.|... |.+.....
T Consensus 153 ~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~--------------------------------p~~~~~~~ 200 (291)
T 2wim_A 153 NNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVP--------------------------------PAISMPQK 200 (291)
T ss_dssp SCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBC--------------------------------CCCBCSCS
T ss_pred CCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccC--------------------------------CccccCcc
Confidence 4699999999999999999998874433 3455555432 22222222
Q ss_pred --cceeCCCCeEEEEEEEccCCCCeEEEEECCEEccc-ceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEE
Q psy2775 244 --DVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKD-RQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANL 320 (785)
Q Consensus 244 --~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 320 (785)
...+.+|+.+.|.|.+.|+|.+.+.|+++|..+.. ...........|.|.++..+|+|.|+|.|.|..|....++.|
T Consensus 201 ~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 280 (291)
T 2wim_A 201 SFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 280 (291)
T ss_dssp EEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEE
T ss_pred cccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEE
Confidence 34577899999999999999999999999998872 233334445689999999999999999999999999999999
Q ss_pred EEecccc
Q psy2775 321 NVDQGKA 327 (785)
Q Consensus 321 ~v~~~~~ 327 (785)
.|..+++
T Consensus 281 ~v~~~~~ 287 (291)
T 2wim_A 281 QVFVQHH 287 (291)
T ss_dssp EC-----
T ss_pred EEEEecc
Confidence 9987554
No 41
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=5e-33 Score=283.19 Aligned_cols=274 Identities=19% Similarity=0.298 Sum_probs=216.1
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecC-CCeeEEEE-CCEEccCC-CCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVP-EPDLLWYY-NGEPLQET-DEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-~~~i~W~~-~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
.||.|...|..+.+.+|++++|.|.+.+.| .+.+.|++ ++..+... .++.+...+. ..++|+|.+++.+|+|.|
T Consensus 1 r~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~D~G~Y 77 (291)
T 1qz1_A 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD---DSSTLTIYNANIDDAGIY 77 (291)
T ss_dssp -CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEET---TEEEEEECSCCGGGCEEE
T ss_pred CCcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCC---CeEEEEEecCCCCCCEEE
Confidence 378999999999999999999999998876 68999999 77766543 4444433221 135799999999999999
Q ss_pred EEEEEcCCe-eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEEEeC
Q psy2775 88 TVVAKNREG-EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QITSEK 163 (785)
Q Consensus 88 ~C~a~~~~~-~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~~~~ 163 (785)
+|.|.|..+ .....+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+... .... .
T Consensus 78 ~C~~~n~~g~~~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~-~ 152 (291)
T 1qz1_A 78 KCVVTAEDGTQSEATVNVKIF----QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIV-L 152 (291)
T ss_dssp EEEEECTTSCEEEEEEEEEEE----CCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEE-C
T ss_pred EEEEEcCCCCeeEEEEEEEee----ccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEE-c
Confidence 999999885 44566777776 5677777778888999999999999999999999999999887532 1222 2
Q ss_pred CEEEEEEcccCCCCcEEEEEEEEcCCeeE--EEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeec
Q psy2775 164 NTHTLTLIQCSTKDKGRYSVKVTNKEGTV--ESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEP 241 (785)
Q Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 241 (785)
....|.|.++..+|+|.|+|.|.|..+.. ...+.+.|.. +|.+...
T Consensus 153 ~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~--------------------------------~p~~~~~ 200 (291)
T 1qz1_A 153 SNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV--------------------------------PPTVQAR 200 (291)
T ss_dssp TTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEE--------------------------------EEEEEES
T ss_pred cCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEec--------------------------------CCccccc
Confidence 23479999999999999999999876433 3345555542 2333332
Q ss_pred C--CcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccc-----eEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCce
Q psy2775 242 L--HDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR-----QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV 314 (785)
Q Consensus 242 ~--~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~-----~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 314 (785)
. ....+.+|+.+.|.|.+.|.|.+.+.|+++|..+... ..........|.|.++..+|+|.|+|.|.|..|..
T Consensus 201 ~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 280 (291)
T 1qz1_A 201 QSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQ 280 (291)
T ss_dssp CSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred ccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCce
Confidence 2 2446789999999999999999999999999988732 34444455689999999999999999999999999
Q ss_pred EEEEEEEEec
Q psy2775 315 ESAANLNVDQ 324 (785)
Q Consensus 315 ~~~~~l~v~~ 324 (785)
..++.|.|..
T Consensus 281 ~~~~~l~V~~ 290 (291)
T 1qz1_A 281 DASIHLKVFA 290 (291)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEEc
Confidence 8888888864
No 42
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=1.9e-33 Score=304.54 Aligned_cols=371 Identities=13% Similarity=0.200 Sum_probs=235.9
Q ss_pred eecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEcc-----------------CCCCEEEeecCCccceEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPLQ-----------------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~L 74 (785)
...|..+.+.+|++++|.|.+.+.+ .+.+.||+++ ..+. ...|+.+..+.. ....+|
T Consensus 4 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L 81 (444)
T 1igt_B 4 LQESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNA--KNTLYL 81 (444)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETT--TTEEEE
T ss_pred EecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCC--CCeEEE
Confidence 3456678999999999999998764 5789999853 2110 123454443321 123569
Q ss_pred EEcccCCCCCeEEEEEEEcCCee---EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEeE
Q psy2775 75 TIKSIKKREEGVYTVVAKNREGE---AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYK 149 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~~~---~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~~ 149 (785)
+|.+++.+|+|.|+|.|.+..+. ......|.|....+.+|.+........+.+|+.+.|.|.+.|. |.+ .|.|++
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 161 (444)
T 1igt_B 82 QMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS 161 (444)
T ss_dssp EECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGG
T ss_pred EECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEec
Confidence 99999999999999999987643 2233567776434445655533323335789999999999885 766 999999
Q ss_pred CCEEcccc---eEEEe---CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCcccccc
Q psy2775 150 DGKLIKDR---QITSE---KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSEL 223 (785)
Q Consensus 150 ~g~~~~~~---~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 223 (785)
++..+... ..... .....|.|.++..+| |.|+|.|.|..+.......+.+.+.. ... .. .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~--~~~-~~---~------- 227 (444)
T 1igt_B 162 GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPT--IKP-CP---P------- 227 (444)
T ss_dssp GTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCS--CCC-CC---C-------
T ss_pred CCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCC--ccc-CC---c-------
Confidence 98764211 01111 113468999999889 99999999998876544444331100 000 00 0
Q ss_pred ceeee-cCCCCCCCee-eecCCcce-eCCCCeEEEEEEEccCC----CCeEEEEECCEEcccc----eEEEeC----CEE
Q psy2775 224 DTLQV-NTGKPEKPSI-LEPLHDVS-ITEGESAVLSVQVGGEP----SPKVEWYKDGKLIKDR----QITSEK----NTH 288 (785)
Q Consensus 224 ~~~~~-~~~~~~~p~~-~~~~~~~~-~~~G~~~~l~C~~~g~p----~~~v~W~~~~~~l~~~----~~~~~~----~~~ 288 (785)
... ......+|.+ +.++.... +.+|+.++|.|.+.|.+ .+.|+|+++|..+... .....+ ..+
T Consensus 228 --~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (444)
T 1igt_B 228 --CKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVS 305 (444)
T ss_dssp --CSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEE
T ss_pred --cccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEE
Confidence 000 0011124554 33433333 58999999999998874 3599999999887521 111111 245
Q ss_pred EEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEE---eccccceeeecc-ceeEeeCccEEEEEEEcC-C-CC-eEEEEE
Q psy2775 289 TLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV---DQGKAEFIKKLD-DLEVKERENAVLEVEVTS-D-KA-DVKWFK 361 (785)
Q Consensus 289 ~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v---~~~~~~~~~~~~-~~~~~~g~~~~l~C~~~~-~-~~-~v~W~~ 361 (785)
.|.|.++..+|+|.|+|.|.|..+.......+.+ ...+|.+..... ...+..| .++|.|.+.+ + ++ .++|++
T Consensus 306 ~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k 384 (444)
T 1igt_B 306 ALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTN 384 (444)
T ss_dssp EEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEE
T ss_pred EEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEE
Confidence 8999999999999999999999886633333322 112333332222 2223344 4999999987 3 33 899999
Q ss_pred CCEEcCCCCcE--EEEEcCc---EEEEEEcCCCCCCceEEEEEEeccce
Q psy2775 362 DGQEIKTSKKV--TIEKKGT---IRKLLIRNISVHDEGEYTCSLPDQET 405 (785)
Q Consensus 362 ~~~~l~~~~~~--~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~ 405 (785)
+|..+...... ....++. .+.|.|.....+|+|.|+|.|.|...
T Consensus 385 ~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~a~n~~l 433 (444)
T 1igt_B 385 NGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYSCSVVHEGL 433 (444)
T ss_dssp TTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTCCCEEEEEECTTS
T ss_pred CCEEccccccccceeCCCCCEEEEEEEEEChHHhcCCCeEEEEEECCCc
Confidence 99988432211 1122332 23466777777789999999998643
No 43
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=6.4e-33 Score=286.32 Aligned_cols=292 Identities=21% Similarity=0.361 Sum_probs=215.5
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEec-CCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAV-PEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
.-.+|.|..++ .+.+.+|++++|.|.+.+. |.+.+.|++++..+....++.+... ...|+|.+++.+|+|.|
T Consensus 4 ~~~~P~~~~~~-~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~------~~~L~i~~~~~~d~G~Y 76 (317)
T 2y25_A 4 PFTGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDG------ICTLLITEFSKKDAGIY 76 (317)
T ss_dssp SSSCCEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----C------CEEEEETTCCSTTCSCE
T ss_pred ccCCCcEeeee-eEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECC------eEEEEEccCCcccCeEE
Confidence 34689998555 5999999999999999887 7789999999999887666554422 15699999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec----------cCCCeEEEeECCEEcccc
Q psy2775 88 TVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG----------EPSPKVEWYKDGKLIKDR 157 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g----------~p~~~v~W~~~g~~~~~~ 157 (785)
+|.|.|..+.....+.|.|. .+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|+++|..+...
T Consensus 77 ~C~~~n~~g~~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~ 152 (317)
T 2y25_A 77 EVILKDDRGKDKSRLKLVDE----AFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYS 152 (317)
T ss_dssp EEEEESSSCEEEEEECCSTH----HHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCC
T ss_pred EEEEECCCCcEEEEEEEEEe----cCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCC
Confidence 99999999887766555543 2333333334455667888888887766 688999999999888653
Q ss_pred ---eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeee-cCCCC
Q psy2775 158 ---QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQV-NTGKP 233 (785)
Q Consensus 158 ---~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 233 (785)
.........+|.|.+++.+|+|.|+|.|.|..|....++.+.|...... ..+...+.. .....
T Consensus 153 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~-------------~~~~~~~~~~~~~~~ 219 (317)
T 2y25_A 153 DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEA-------------YAEFQRLKQAAIAEK 219 (317)
T ss_dssp SSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHH-------------HHHHHHHHHHHHHTT
T ss_pred CCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeecccc-------------chhhcccCCcccCcC
Confidence 2334555678999999999999999999999998888777776421000 000000000 00011
Q ss_pred CCCeeeec-CCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccc---eEEEe-CCEEEEEEccCCCCCCeEEEEEEE
Q psy2775 234 EKPSILEP-LHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QITSE-KNTHTLTLIQCSTKDKGRYSVKVT 308 (785)
Q Consensus 234 ~~p~~~~~-~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~---~~~~~-~~~~~l~i~~~~~~d~G~Y~C~~~ 308 (785)
.+|.+... +....+.+|+.+.|.|.+.|+|.+.+.|+++|..+... .+... +....|.|.++..+|+|.|+|.|.
T Consensus 220 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 299 (317)
T 2y25_A 220 NRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVK 299 (317)
T ss_dssp TSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEE
T ss_pred CCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEE
Confidence 23444443 44568889999999999999999999999999888622 22222 456799999999999999999999
Q ss_pred eCCCceEEEEEEEEec
Q psy2775 309 NKEGTVESAANLNVDQ 324 (785)
Q Consensus 309 n~~g~~~~~~~l~v~~ 324 (785)
|..|....++.|.|..
T Consensus 300 N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 300 NKYGSETSDFTVSVFI 315 (317)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCeEEEEEEEEEEc
Confidence 9999999888888874
No 44
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-32 Score=279.61 Aligned_cols=267 Identities=24% Similarity=0.342 Sum_probs=200.2
Q ss_pred cccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCCcEEEE--EcCcEEEEEEcCCCC-CCceEEEEEE
Q psy2775 325 GKAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSKKVTIE--KKGTIRKLLIRNISV-HDEGEYTCSL 400 (785)
Q Consensus 325 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~~~~~~--~~~~~~~l~i~~~~~-~d~G~Y~C~a 400 (785)
.+|.+...+....+.+|+.+.|.|.+.+ |.+.++|+++|..+.... +... .++....|.|.++.. +|+|.|+|.|
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~-~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a 83 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQR-FETIEFDESAGAVLRIQPLRTPRDENVYECVA 83 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTT-EEEEEETTTTEEEEEECSCCTTTTCSEEEEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCc-eEEEEecCCCceEEEEecccccCCCeEEEEEE
Confidence 4667777778888999999999999987 678999999999886543 3332 344456799999998 9999999999
Q ss_pred eccceE----EEEEEEecC------CcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCC---CEEEEEe
Q psy2775 401 PDQETS----AELNVVELP------PEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSE---NVTLSID 466 (785)
Q Consensus 401 ~n~~~~----~~~~v~~~~------~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~---~~~~~~~ 466 (785)
.|..+. ..+.|...+ |.+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+.... ++....+
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~ 163 (304)
T 2yd9_A 84 QNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRS 163 (304)
T ss_dssp ECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEECTT
T ss_pred ECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeCCC
Confidence 986553 455555432 55666677788899999999999998 678999999999886542 2322222
Q ss_pred CcEEEEEEccCCCCCcEEEEEEEeec-CcceeE-EEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeec
Q psy2775 467 GKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESK-ATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNL 544 (785)
Q Consensus 467 ~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 544 (785)
..|.|.+++.+|+|.|+|.|.|. |..... +.|.|.....
T Consensus 164 ---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~------------------------------------ 204 (304)
T 2yd9_A 164 ---GALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNV------------------------------------ 204 (304)
T ss_dssp ---SCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCE------------------------------------
T ss_pred ---eEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeecc------------------------------------
Confidence 27999999999999999999997 544333 6677654311
Q ss_pred ccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCC
Q psy2775 545 FIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSE 624 (785)
Q Consensus 545 ~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~ 624 (785)
+|.|...+....+.+|+.++|.|.+.|+|.|.|+|+|+|..+...... ..+...|.|.++
T Consensus 205 -------------~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~~~~----~~~~~~L~i~~~--- 264 (304)
T 2yd9_A 205 -------------APRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDM----PVGRNVLELTDV--- 264 (304)
T ss_dssp -------------EEEEEECCCCBCCCTTCCEEEEEEEEEESCCEEEEEETTEECSCSSSC----CBSEEEEEECSC---
T ss_pred -------------CCcEEecCCceEEcCCCeEEEEEEEeeeCCCEEEEEECCEECCCcccc----cCCcEEEEEccc---
Confidence 155655556778999999999999999999999999999998765442 245566787765
Q ss_pred CCceeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 625 TDAGDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 625 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
+|+|.|+|.|.|..|....++.|.|..
T Consensus 265 ~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 291 (304)
T 2yd9_A 265 KDSANYTCVAMSSLGVIEAVAQITVKS 291 (304)
T ss_dssp CSCEEEEEEEEETTEEEEEEEEEC---
T ss_pred ccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 689999999999999999999988874
No 45
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=100.00 E-value=6.6e-33 Score=301.32 Aligned_cols=370 Identities=15% Similarity=0.232 Sum_probs=229.7
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---c--------------cCCCCEEEeecCCccceEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---L--------------QETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~--------------~~~~~~~~~~~~~~~~~~~~L~ 75 (785)
..|..+.+.+|++++|.|.+.+.+ .+.+.||++. .. + ....|+.+..+.. ...++|+
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~ 82 (457)
T 1hzh_H 5 VQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTS--ANTAYME 82 (457)
T ss_dssp EECCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETT--TTEEEEE
T ss_pred ecCCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCC--CCEEEEE
Confidence 446678999999999999998876 6789999842 11 1 0123444433221 1235699
Q ss_pred EcccCCCCCeEEEEEEEcCCe------------eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC
Q psy2775 76 IKSIKKREEGVYTVVAKNREG------------EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS 142 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~------------~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~ 142 (785)
|.+++.+|+|.|+|.|.|..+ .......|.|......+|.+........+.+|+.+.|.|.+.|. |.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~ 162 (457)
T 1hzh_H 83 LRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 162 (457)
T ss_dssp ECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSC
T ss_pred ECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCC
Confidence 999999999999999998764 12234567776544446666544444456899999999999886 64
Q ss_pred -CeEEEeECCEEcccce---EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCC
Q psy2775 143 -PKVEWYKDGKLIKDRQ---ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPS 214 (785)
Q Consensus 143 -~~v~W~~~g~~~~~~~---~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~ 214 (785)
+.|.|+++|..+.... ....++ ...|.|.++..+| |.|+|.|.|..+.......+.+............+.
T Consensus 163 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~ 241 (457)
T 1hzh_H 163 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPA 241 (457)
T ss_dssp CCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCC
T ss_pred CeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCC
Confidence 7999999997653211 111112 2479999999999 999999999887655444444322110000000000
Q ss_pred CCCccccccceeeecCCCCCCCee-eecCCcce-eCCCCeEEEEEEEccCCCC----eEEEEECCEEcccce--EE--Ee
Q psy2775 215 PPPYVVSELDTLQVNTGKPEKPSI-LEPLHDVS-ITEGESAVLSVQVGGEPSP----KVEWYKDGKLIKDRQ--IT--SE 284 (785)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~-~~~G~~~~l~C~~~g~p~~----~v~W~~~~~~l~~~~--~~--~~ 284 (785)
.....+|.+ +.++.... +.+|+.+.|.|.+.|.|++ .|+|++++..+.... .. ..
T Consensus 242 ---------------~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~ 306 (457)
T 1hzh_H 242 ---------------PELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQY 306 (457)
T ss_dssp ---------------CCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECT
T ss_pred ---------------ccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecC
Confidence 000023444 33333333 6789999999999987653 999999998875221 11 11
Q ss_pred CCE----EEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEE---eccccceeeec-cceeEeeCccEEEEEEEcC-CC-
Q psy2775 285 KNT----HTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV---DQGKAEFIKKL-DDLEVKERENAVLEVEVTS-DK- 354 (785)
Q Consensus 285 ~~~----~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v---~~~~~~~~~~~-~~~~~~~g~~~~l~C~~~~-~~- 354 (785)
++. ..|.|.....+|+|.|+|.|.|..+.......+.+ ...+|.+...+ ....+..|+ +.|.|.+.+ ++
T Consensus 307 ~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~ 385 (457)
T 1hzh_H 307 NSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPS 385 (457)
T ss_dssp TSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCCCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSS
T ss_pred CCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCCCCCCeEEEECCCccccCCCc-EEEEEEEEeEECC
Confidence 121 12222233333499999999987655433333432 11233333322 222344555 999999987 33
Q ss_pred -CeEEEEECCEEcCCCCcE--EEEEcCcE---EEEEEcCCCCCCceEEEEEEeccce
Q psy2775 355 -ADVKWFKDGQEIKTSKKV--TIEKKGTI---RKLLIRNISVHDEGEYTCSLPDQET 405 (785)
Q Consensus 355 -~~v~W~~~~~~l~~~~~~--~~~~~~~~---~~l~i~~~~~~d~G~Y~C~a~n~~~ 405 (785)
+.++|+++|..+...... ....++.. +.|.|.....+|+|.|+|.|.|...
T Consensus 386 ~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 386 DIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 442 (457)
T ss_dssp CCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEECCC
Confidence 389999999988643211 11223322 2466666666789999999999654
No 46
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=283.96 Aligned_cols=286 Identities=22% Similarity=0.358 Sum_probs=211.3
Q ss_pred ccceeeeccceeEeeCccEEEEEEEcC--CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEecc
Q psy2775 326 KAEFIKKLDDLEVKERENAVLEVEVTS--DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQ 403 (785)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~~~l~C~~~~--~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 403 (785)
+|.+..+ ....+.+|+.+.|.|.+.+ +.+.++|+++|..+....++.+... ...|.|.++..+|+|.|+|.+.|.
T Consensus 7 ~P~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~n~ 83 (317)
T 2y25_A 7 GPHFVEY-LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDG--ICTLLITEFSKKDAGIYEVILKDD 83 (317)
T ss_dssp CCEEEEE-EEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----C--CEEEEETTCCSTTCSCEEEEEESS
T ss_pred CCcEeee-eeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECC--eEEEEEccCCcccCeEEEEEEECC
Confidence 3445433 3578899999999999987 4589999999999987666555432 246999999999999999999988
Q ss_pred ceEEEEEEEec---CCcccccCCCeEEecCCcEEEEEEEeC-----------CCceEEEEECCEEcccCCCEEEEEeCcE
Q psy2775 404 ETSAELNVVEL---PPEISVPLQDVKVSRDEKASFEIELTK-----------GDALVKWYKDGKEIAFSENVTLSIDGKK 469 (785)
Q Consensus 404 ~~~~~~~v~~~---~~~~~~~~~~~~v~~g~~~~l~C~~~~-----------~~~~i~W~~~~~~~~~~~~~~~~~~~~~ 469 (785)
.+.....+... ++.+...+....+..|+.+.|.|.+.+ +.+.+.|++++..+..+.++.+...+..
T Consensus 84 ~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~ 163 (317)
T 2y25_A 84 RGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQ 163 (317)
T ss_dssp SCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSE
T ss_pred CCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCE
Confidence 77665443211 122222222333445666666666544 5778999999999988888888888888
Q ss_pred EEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccc----cCCCeeEEeccCceeEEEEecCCceeeEEeec
Q psy2775 470 QKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLT----KLPSVTLVPHLGDATFQVELSSPDIQVKWLNL 544 (785)
Q Consensus 470 ~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 544 (785)
..|.|.+++.+|+|.|+|.|.|. |....+..|.|......+.. ..+.+
T Consensus 164 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~--------------------------- 216 (317)
T 2y25_A 164 IWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAI--------------------------- 216 (317)
T ss_dssp EEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHH---------------------------
T ss_pred EEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCccc---------------------------
Confidence 89999999999999999999997 76666666665421100000 00000
Q ss_pred ccccccCCCCCCCCCeEeee-eeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEee-CCeEEEEEccCC
Q psy2775 545 FIVPTCPLGSPGQAPLFIER-FEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFD-GENIILELKEAD 622 (785)
Q Consensus 545 ~~~~~~~~~~~~~~p~~~~~-~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~-~~~~~L~i~~~~ 622 (785)
....+|.++.. +....+.+|+.++|.|.+.|+|.|.|.|+|+|..+..+.++.+... +...+|.|.++.
T Consensus 217 ---------~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~ 287 (317)
T 2y25_A 217 ---------AEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVS 287 (317)
T ss_dssp ---------HTTTSCEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCC
T ss_pred ---------CcCCCCcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCC
Confidence 00011334433 4457899999999999999999999999999999988777666655 667799999999
Q ss_pred CCCCceeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 623 SETDAGDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 623 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
. +|+|.|+|.|.|..|....++.|.|.+
T Consensus 288 ~-~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 288 T-ADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp S-TTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred H-HHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 9 999999999999999999999998874
No 47
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=7.1e-33 Score=299.97 Aligned_cols=366 Identities=14% Similarity=0.164 Sum_probs=223.1
Q ss_pred ccceeEeeCccEEEEEEEcCC---CCeEEEEEC--CEEcC-----------------CCCcEEEEEc--CcEEEEEEcCC
Q psy2775 333 LDDLEVKERENAVLEVEVTSD---KADVKWFKD--GQEIK-----------------TSKKVTIEKK--GTIRKLLIRNI 388 (785)
Q Consensus 333 ~~~~~~~~g~~~~l~C~~~~~---~~~v~W~~~--~~~l~-----------------~~~~~~~~~~--~~~~~l~i~~~ 388 (785)
+....+.+|+.++|.|.+.+. .+.+.|+++ +..+. ...++.+..+ +....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 345678999999999999863 578999975 22210 1235655543 34567999999
Q ss_pred CCCCceEEEEEEeccce-------EEEEEEEe---cCCcccccCCCeEEecCCcEEEEEEEeC--CCc-eEEEEECCEEc
Q psy2775 389 SVHDEGEYTCSLPDQET-------SAELNVVE---LPPEISVPLQDVKVSRDEKASFEIELTK--GDA-LVKWYKDGKEI 455 (785)
Q Consensus 389 ~~~d~G~Y~C~a~n~~~-------~~~~~v~~---~~~~~~~~~~~~~v~~g~~~~l~C~~~~--~~~-~i~W~~~~~~~ 455 (785)
..+|+|.|.|.+.|..+ ...+.|.. .+|.+........+.+|+.++|.|.+.+ |.+ .|.|++++..+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~ 166 (444)
T 1igt_B 87 KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSS 166 (444)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCC
Confidence 99999999999988532 23455542 1333332222223478999999999987 455 89999998763
Q ss_pred ccCCCEEEEEeC---cEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEE
Q psy2775 456 AFSENVTLSIDG---KKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVE 531 (785)
Q Consensus 456 ~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 531 (785)
...........+ ..+.|+|.++..+| |.|+|.|.|. +.......+.+..+.. + .|.
T Consensus 167 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~-~------------------~~~ 226 (444)
T 1igt_B 167 GVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTI-K------------------PCP 226 (444)
T ss_dssp TEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSC-C------------------CCC
T ss_pred CeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCc-c------------------cCC
Confidence 211000001111 12569999999899 9999999997 5443333333221100 0 000
Q ss_pred ecCCceeeEEeecccccccCCCCCCCCCeE-eeeeeeee-eeecCeEEEEEEEecCC---C-CceEEEeCCEEecCCCCe
Q psy2775 532 LSSPDIQVKWLNLFIVPTCPLGSPGQAPLF-IERFEEKT-VKEKGTIRLMAKVKASP---A-PSIVWFRNNKPLLSSPKK 605 (785)
Q Consensus 532 ~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~-~~~~~~~~-v~~g~~v~l~C~~~g~P---~-p~v~W~~~~~~i~~~~~~ 605 (785)
...|.......+|.+ +.++.... +.+|++++|.|.+.|.| + +.|+|+|+|..+......
T Consensus 227 ---------------~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~ 291 (444)
T 1igt_B 227 ---------------PCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQ 291 (444)
T ss_dssp ---------------CCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCB
T ss_pred ---------------ccccCCcccCCCceEEecCCchhheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccc
Confidence 000101111113444 33333333 68999999999999984 3 599999999988654322
Q ss_pred e-EEeeC----CeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcc
Q psy2775 606 R-EIFDG----ENIILELKEADSETDAGDYKVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQ 680 (785)
Q Consensus 606 ~-~~~~~----~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 680 (785)
. ....+ ..++|.|.++.. +|+|.|+|.|.|..|....+..+.+. .
T Consensus 292 ~~~~~~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~n~~~~~~~~~~v~~~-~---------------------------- 341 (444)
T 1igt_B 292 THREDYNSTLRVVSALPIQHQDW-MSGKEFKCKVNNKDLPAPIERTISKP-K---------------------------- 341 (444)
T ss_dssp CCEEECSSSEEEEEEEECCHHHH-HTTCEEEEEEECTTCSSCEEEEEECC-C----------------------------
T ss_pred cceeCCCCcEEEEEEEEEcHHHh-ccCCcEEEEEEcCCCCCceEEEEecc-C----------------------------
Confidence 1 11212 245799999999 99999999999999977433333220 0
Q ss_pred eeeeeecCccccCCCcCCCCCCcEEeecCCeEEEEEEEec-CCCC-ceEEeECCEEeeecccccc--chh----hhcccc
Q psy2775 681 STEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRFKA-LPPP-KAEWTVNGTVIVPSKRVKG--KAE----FIKKLD 752 (785)
Q Consensus 681 ~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g-~P~p-~i~W~~~~~~~~~~~~~~~--~~~----~~~~l~ 752 (785)
.+..+|.+.........+..| .++|.|.+.| .|+| .|+|++||..+........ ..+ ....|.
T Consensus 342 --------~~~~~P~v~~~~~~~~~~~~~-~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~ 412 (444)
T 1igt_B 342 --------GSVRAPQVYVLPPPEEEMTKK-QVTLTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLR 412 (444)
T ss_dssp --------CCCBCCEEEEECCCGGGTTSS-EEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEE
T ss_pred --------CCCCCCEEEEeCCChHHccCC-eEEEEEEEEeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEE
Confidence 122445543322222223345 5999999999 5666 8999999999854322211 111 111233
Q ss_pred cceeeeeeceEEEEEEeccc
Q psy2775 753 DLEVKERENAVLEVEVTSDK 772 (785)
Q Consensus 753 ~~~v~~~~~~~~~c~~~~~~ 772 (785)
+......|.|.|+|.+.++.
T Consensus 413 i~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 413 VEKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp EEHHHHHTCCCEEEEEECTT
T ss_pred EChHHhcCCCeEEEEEECCC
Confidence 33333345899999999854
No 48
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=272.53 Aligned_cols=268 Identities=20% Similarity=0.353 Sum_probs=207.3
Q ss_pred ccceeeeccceeEeeCccEEEEEEEcCCCCeEEEEE-CCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccc
Q psy2775 326 KAEFIKKLDDLEVKERENAVLEVEVTSDKADVKWFK-DGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQE 404 (785)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~v~W~~-~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 404 (785)
++.+...+....+.+|+.+.|.|.+.+.++.+.|++ +|..+....++.+..++....|.|.++..+|+|.|+|.+.|..
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~~~~p~~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~ 83 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK 83 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEEESCCSEEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred CceEEEeccceEecCCCcEEEEEEEeCCCCceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEeccc
Confidence 455666677788999999999999998767999999 7888877778888888877789999999999999999999865
Q ss_pred eEE---EEEE-EecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccC--CCEEEEEeCcEEEEEEccC
Q psy2775 405 TSA---ELNV-VELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFS--ENVTLSIDGKKQKLIIFSA 477 (785)
Q Consensus 405 ~~~---~~~v-~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~ 477 (785)
+.. .+.+ +..++.+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+... .++.+..++ .|.|.++
T Consensus 84 g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~v 160 (291)
T 2wim_A 84 GQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNI 160 (291)
T ss_dssp SCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECTTS---CEEETTC
T ss_pred CceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEccCC---CEEEEec
Confidence 432 2222 234556666667788999999999999988 67889999999887643 333333232 6999999
Q ss_pred CCCCcEEEEEEEeec-Ccce--eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCC
Q psy2775 478 GLEDAGEYSCRVGDT-GDKE--SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGS 554 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 554 (785)
..+|+|.|+|.|.|. +... ....+.|..+|.
T Consensus 161 ~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~---------------------------------------------- 194 (291)
T 2wim_A 161 NKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPA---------------------------------------------- 194 (291)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCC----------------------------------------------
T ss_pred chhhCEEEEEEEEECCCCeeEEeeEEEEeccCCc----------------------------------------------
Confidence 999999999999997 4433 345566655431
Q ss_pred CCCCCeEeeee--eeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEE
Q psy2775 555 PGQAPLFIERF--EEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 555 ~~~~p~~~~~~--~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C 632 (785)
+.... ....+.+|+.++|.|.+.|+|.|.|.|+++|..+..+.++.+ .+...+|.|.++.. +|+|.|+|
T Consensus 195 ------~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~--~~~~~~L~i~~~~~-~d~G~Y~C 265 (291)
T 2wim_A 195 ------ISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL--KGSNTELTVRNIIN-SDGGPYVC 265 (291)
T ss_dssp ------CBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCTTTEEE--CSTTCEEEEESCCS-TTCEEEEE
T ss_pred ------cccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCCccEEE--cCCccEEEEeeCCc-ccCEEEEE
Confidence 11111 144678999999999999999999999999999987765433 34456799999999 99999999
Q ss_pred EEEcCCcceEEEEEEEEEe
Q psy2775 633 VATNELGSATHGARVTVDV 651 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V~~ 651 (785)
.|.|..|..++++.|.|..
T Consensus 266 ~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 266 RATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp EEEETTEEEEEEEEEEC--
T ss_pred EEEECCCceeeeEEEEEEE
Confidence 9999999999999999874
No 49
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=100.00 E-value=2.5e-31 Score=290.02 Aligned_cols=375 Identities=15% Similarity=0.192 Sum_probs=236.0
Q ss_pred eecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---cc--------------CCCCEEEeecCCccceEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---LQ--------------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~~--------------~~~~~~~~~~~~~~~~~~~L 74 (785)
+..|..+.+.+|++++|.|.+.+.+ .+.+.||++. .. +. ...|+.+..+.. ....+|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L 82 (475)
T 1iga_A 5 LEQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTS--ATTAYM 82 (475)
T ss_pred eccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCC--CCeEEE
Confidence 4567889999999999999998764 5789999963 11 10 022333333211 123569
Q ss_pred EEcccCCCCCeEEEEEEEcCCee------EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC-C-eE
Q psy2775 75 TIKSIKKREEGVYTVVAKNREGE------AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS-P-KV 145 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~~~------~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~-~-~v 145 (785)
+|.+++.+|+|.|.|.+.+..+. ....+.|.|....+.+|.+..... ..+.+|+.+.|.|.+.|. |. + .|
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v~L~C~~~g~~P~~p~~v 161 (475)
T 1iga_A 83 GLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNVVIACLVQGFFPQEPLSV 161 (475)
T ss_pred EECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeEEEEEEEeeecCCCceEE
Confidence 99999999999999999987652 223456666543344566554322 223689999999999886 55 4 99
Q ss_pred EEeECCEEcccce---EE-EeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeE-EEEEEEEeecCCCCCCCCCCCCCC
Q psy2775 146 EWYKDGKLIKDRQ---IT-SEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTV-ESAANLNVDPYEPKESKETPPSPP 216 (785)
Q Consensus 146 ~W~~~g~~~~~~~---~~-~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~ 216 (785)
.|++++....... .. ..++ ...|.|..+..+|+|.|+|.|.|..+.. +..+.+.|...+. . .
T Consensus 162 ~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~--~-------~ 232 (475)
T 1iga_A 162 TWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPP--T-------P 232 (475)
T ss_pred EEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcc--c-------c
Confidence 9999885432111 11 0111 2368888888899999999999988632 2223332311000 0 0
Q ss_pred CccccccceeeecCCCCCCCee-eecCCcceeCCCCeEEEEEEEccCCC---CeEEEEECCEEcccc----eEEE-e---
Q psy2775 217 PYVVSELDTLQVNTGKPEKPSI-LEPLHDVSITEGESAVLSVQVGGEPS---PKVEWYKDGKLIKDR----QITS-E--- 284 (785)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~G~~~~l~C~~~g~p~---~~v~W~~~~~~l~~~----~~~~-~--- 284 (785)
..... ........+|.+ +.++....+.+|+.+.|.|.+.|.++ +.|+| ++..+... .... .
T Consensus 233 ~~~~~-----~~~~~~~~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~ 305 (475)
T 1iga_A 233 SPSTP-----PTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCY 305 (475)
T ss_pred ccccc-----ccCCCCCCCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCccccCceECCCCCE
Confidence 00000 000000013443 33343444689999999999988754 59999 44333211 0111 0
Q ss_pred CCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEE--eccccceeee-ccceeEeeCccEEEEEEEcC-CC--CeEE
Q psy2775 285 KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV--DQGKAEFIKK-LDDLEVKERENAVLEVEVTS-DK--ADVK 358 (785)
Q Consensus 285 ~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v--~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~-~~--~~v~ 358 (785)
...+.|.|.++..+|+|.|+|.|.|..+.......|.+ ...+|.+... .....+.+|+.+.|.|.+.+ ++ +.++
T Consensus 306 ~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~ 385 (475)
T 1iga_A 306 SVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVR 385 (475)
T ss_pred EEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEE
Confidence 12457999999999999999999999887654444532 1233433332 23334678999999999987 23 4999
Q ss_pred EEECCEEcCCCCcE----EEE---EcCc---EEEEEEcCCCCCCceEEEEEEeccceEEEE
Q psy2775 359 WFKDGQEIKTSKKV----TIE---KKGT---IRKLLIRNISVHDEGEYTCSLPDQETSAEL 409 (785)
Q Consensus 359 W~~~~~~l~~~~~~----~~~---~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~ 409 (785)
|+++|..+...... ... .+|. .+.|.|.....+|+|.|+|.|.|......+
T Consensus 386 W~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~~~~ 446 (475)
T 1iga_A 386 WLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPLAF 446 (475)
T ss_pred EEECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCCCcc
Confidence 99999998765311 112 2232 245788888888999999999997654433
No 50
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=5.4e-31 Score=268.15 Aligned_cols=271 Identities=18% Similarity=0.352 Sum_probs=205.2
Q ss_pred ccceeeeccceeEeeCccEEEEEEEcCC--CCeEEEEE-CCEEcCCCC-cEEEEE-cCcEEEEEEcCCCCCCceEEEEEE
Q psy2775 326 KAEFIKKLDDLEVKERENAVLEVEVTSD--KADVKWFK-DGQEIKTSK-KVTIEK-KGTIRKLLIRNISVHDEGEYTCSL 400 (785)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~--~~~v~W~~-~~~~l~~~~-~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a 400 (785)
++.+...+....+.+|+.+.|.|.+.+. .+.++|++ +|..+.... ++.+.. ++....|.|.++..+|+|.|+|.+
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 81 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEE
Confidence 3455566777889999999999999883 48999999 787776433 444433 345567999999999999999999
Q ss_pred eccce---EEEEEE-EecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEc
Q psy2775 401 PDQET---SAELNV-VELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIF 475 (785)
Q Consensus 401 ~n~~~---~~~~~v-~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~ 475 (785)
.|..+ +..+.+ +..+|.+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+............ ...|.|.
T Consensus 82 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~ 160 (291)
T 1qz1_A 82 TAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS-NNYLQIR 160 (291)
T ss_dssp ECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEECT-TSCEEET
T ss_pred EcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEcc-CCcEEEc
Confidence 98653 223333 234566667777888999999999999988 67889999999887554322222211 1369999
Q ss_pred cCCCCCcEEEEEEEeec-Ccce--eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCC
Q psy2775 476 SAGLEDAGEYSCRVGDT-GDKE--SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPL 552 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~-g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 552 (785)
++..+|+|.|+|.|.|. +... ....|.|..+|
T Consensus 161 ~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p--------------------------------------------- 195 (291)
T 1qz1_A 161 GIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPP--------------------------------------------- 195 (291)
T ss_dssp TCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEE---------------------------------------------
T ss_pred cCccccCeEEEEEEEecCCCceeeEEEEEEEecCC---------------------------------------------
Confidence 99999999999999996 3333 34556665442
Q ss_pred CCCCCCCeEeee--eeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCC--eeEEeeCCeEEEEEccCCCCCCce
Q psy2775 553 GSPGQAPLFIER--FEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPK--KREIFDGENIILELKEADSETDAG 628 (785)
Q Consensus 553 ~~~~~~p~~~~~--~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~--~~~~~~~~~~~L~i~~~~~~~d~G 628 (785)
.+... +....+.+|+.++|.|.+.|+|.|.+.|+++|..+..+.. ..........+|.|.++.. +|+|
T Consensus 196 -------~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G 267 (291)
T 1qz1_A 196 -------TVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDK-NDEA 267 (291)
T ss_dssp -------EEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCG-GGCE
T ss_pred -------cccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecCh-hcCE
Confidence 22211 2355788999999999999999999999999999876542 2333444556899999999 9999
Q ss_pred eEEEEEEcCCcceEEEEEEEEE
Q psy2775 629 DYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 629 ~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.|+|.|.|..|....++.|.|.
T Consensus 268 ~Y~C~a~N~~G~~~~~~~l~V~ 289 (291)
T 1qz1_A 268 EYVCIAENKAGEQDASIHLKVF 289 (291)
T ss_dssp EEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEeCCCceEEEEEEEEE
Confidence 9999999999999988888886
No 51
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=100.00 E-value=3e-31 Score=273.08 Aligned_cols=280 Identities=21% Similarity=0.312 Sum_probs=208.0
Q ss_pred ceeEeeCccEEEEEEEcC--CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccceE---EEE
Q psy2775 335 DLEVKERENAVLEVEVTS--DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQETS---AEL 409 (785)
Q Consensus 335 ~~~~~~g~~~~l~C~~~~--~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~~---~~~ 409 (785)
...+.+|+.+.|.|.+.. |.+.++|++++..+....++.+...+..+.|.|.++..+|+|.|+|.+.|..+. ..+
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l 89 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLI 89 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEE
Confidence 456788999999988864 678999999999999888888888887788999999999999999999985543 222
Q ss_pred EEEe-----------cCCcccccC-CCeEEecCCcEEEEEEEe-C-CCceEEEEECCEEcccCCCEEEEEe--CcEEEEE
Q psy2775 410 NVVE-----------LPPEISVPL-QDVKVSRDEKASFEIELT-K-GDALVKWYKDGKEIAFSENVTLSID--GKKQKLI 473 (785)
Q Consensus 410 ~v~~-----------~~~~~~~~~-~~~~v~~g~~~~l~C~~~-~-~~~~i~W~~~~~~~~~~~~~~~~~~--~~~~~L~ 473 (785)
.+.. .+|.+...+ ....+.+|+.+.|.|.+. + +.+.+.|++++..+....++.+..+ +....|.
T Consensus 90 ~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~ 169 (312)
T 2y23_A 90 DEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMF 169 (312)
T ss_dssp CHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEE
T ss_pred EEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEE
Confidence 2211 044444333 367788999999999998 5 7888999999999988887777665 4567899
Q ss_pred EccCCCCCcEEEEEEEeecCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 474 IFSAGLEDAGEYSCRVGDTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 474 i~~~~~~d~G~Y~C~a~n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
|.+++.+|+|.|+|.|.|. .......+.+...........+.....+ .
T Consensus 170 i~~~~~~d~G~Y~C~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~ 217 (312)
T 2y23_A 170 MEKLQDEDEGTYTFQLQDG-KATNHSTVVLVGDVFKKLQKEAEFQRQE-------------------------------W 217 (312)
T ss_dssp ESCCCGGGCEEEEEEEESS-SCEEEEEEEECTHHHHHHHHHHHHHHHH-------------------------------H
T ss_pred EccCCcccCEeEEEEEEeC-CceEEEEEEEcchhhhhhcccccccccc-------------------------------h
Confidence 9999999999999999873 2333344444322110000000000000 0
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEE
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C 632 (785)
....+|.|...+. ..+.+|+.++|.|.+.|.|.| .|.|+|+|..+..+.++.+. ++..+|.|.++.. +|+|.|+|
T Consensus 218 ~~~~~p~~~~~~~-~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~-~d~G~Y~C 293 (312)
T 2y23_A 218 IRKQGPHFVEYLS-WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSK-KDAGIYEV 293 (312)
T ss_dssp HHHHSSEEEEEEE-EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSG-GGCEEEEE
T ss_pred hhccCCceeecce-EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCH-HHCEEEEE
Confidence 0001256665444 788999999999999999998 99999999999766555433 4567899999999 99999999
Q ss_pred EEEcCCcceEEEEEEEEE
Q psy2775 633 VATNELGSATHGARVTVD 650 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V~ 650 (785)
.|.|..|....++.|.|+
T Consensus 294 ~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 294 ILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EEESTTCCEEEEEEECSC
T ss_pred EEEcCCCceeeeeEEEec
Confidence 999999999998888764
No 52
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.98 E-value=9.2e-31 Score=269.22 Aligned_cols=275 Identities=18% Similarity=0.219 Sum_probs=202.5
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCCC-----eeEEEECCEEc-------------cCCCCEEEeecCC-ccceEEEEE
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPEP-----DLLWYYNGEPL-------------QETDEVVFSDQSD-MHSYVSIVT 75 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~-----~i~W~~~~~~~-------------~~~~~~~~~~~~~-~~~~~~~L~ 75 (785)
+...|..+.+..|++++|.|.+.+.+.+ .|.|+|++... ....+..+..... ......+|+
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~ 82 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLR 82 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEE
T ss_pred EEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEE
Confidence 5677889999999999999999887654 48999987532 2223333322111 111224599
Q ss_pred EcccCCCCCeEEEEEEEc-CCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEe-ccCCCeEEEeECCEE
Q psy2775 76 IKSIKKREEGVYTVVAKN-REGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVG-GEPSPKVEWYKDGKL 153 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~-~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~-g~p~~~v~W~~~g~~ 153 (785)
|.+++.+|+|.|+|.|.+ ..+.....+.|.+. .+|.+........+..|+.+.+.|.+. +.|.+.+.|++++..
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~----~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~ 158 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVL----AKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGG 158 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEECCB----BCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCC
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeeeeec----cCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcc
Confidence 999999999999999864 45566666666665 456666555666677888999999874 789999999999887
Q ss_pred cccceEEEe--CC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEE--EEEEeecCCCCCCCCCCCCCCCccccccce
Q psy2775 154 IKDRQITSE--KN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESA--ANLNVDPYEPKESKETPPSPPPYVVSELDT 225 (785)
Q Consensus 154 ~~~~~~~~~--~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (785)
+........ .+ .+.|.|.....+|+|.|+|.|.|..+..... +.|.|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~------------------------ 214 (313)
T 4fqp_A 159 MPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY------------------------ 214 (313)
T ss_dssp EEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC------------------------
T ss_pred ccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc------------------------
Confidence 754422211 11 2468899999999999999999987654443 444443
Q ss_pred eeecCCCCCCCeee-ecCCcceeCCCCeEEEEEEEccCCCC-eEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEE
Q psy2775 226 LQVNTGKPEKPSIL-EPLHDVSITEGESAVLSVQVGGEPSP-KVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRY 303 (785)
Q Consensus 226 ~~~~~~~~~~p~~~-~~~~~~~~~~G~~~~l~C~~~g~p~~-~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y 303 (785)
.+|.+. .......+.+|+.++|.|.+.|+|.| .|+|+++|..+........ .+|.|.++..+|+|.|
T Consensus 215 --------~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~~~~~---~~L~i~~v~~~d~G~Y 283 (313)
T 4fqp_A 215 --------YPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQG---AQLLIRPVDKPINTTL 283 (313)
T ss_dssp --------EEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEEET---TEEEECCCSSCCEEEE
T ss_pred --------cCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCceEEeC---CEEEECcCChhhCEEE
Confidence 234443 34445567788999999999999988 6999999998875443322 2799999999999999
Q ss_pred EEEEEeCCCceEEEEEEEEeccccc
Q psy2775 304 SVKVTNKEGTVESAANLNVDQGKAE 328 (785)
Q Consensus 304 ~C~~~n~~g~~~~~~~l~v~~~~~~ 328 (785)
+|.|.|..|....++.|.|.+.||-
T Consensus 284 ~C~a~N~~G~~~~~~~l~V~~~PP~ 308 (313)
T 4fqp_A 284 ICNVTNALGARQAELTVQVKEGPPH 308 (313)
T ss_dssp EEEEECSSCEEEEEEEEEEECCC--
T ss_pred EEEEEeCCCcEEEEEEEEEEeCCCC
Confidence 9999999999999999999987764
No 53
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.98 E-value=4e-31 Score=268.82 Aligned_cols=265 Identities=14% Similarity=0.158 Sum_probs=203.1
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|...+..+.+.+|++++|.|.+.| .+.|++++..+ . .....+ ++|.|.+++.+|+|.|+|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~~----~i~W~~~~~~~----~-~~~~~~------~~L~i~~~~~~d~G~Y~C 74 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFN----E-MVENKK------NEWIQEKAEATRTGTYTC 74 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEECTT----EEEEEEECSSS----C-EEEECS------SEEEETTCCGGGCEEEEE
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECCCC----cEEEecCCcce----e-eecCCC------ceEEEeccCHHhCeEEEE
Confidence 46899999999999999999999999876 89999999766 1 111222 459999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCC-CeEEEe-ECCEEcccceEEEeCCEEE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPS-PKVEWY-KDGKLIKDRQITSEKNTHT 167 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~-~~v~W~-~~g~~~~~~~~~~~~~~~~ 167 (785)
.|.| |. ...+.|.|. .+|.+........+.+|+.+.|.|.+.+ |. +.+.|+ +||..+.............
T Consensus 75 ~~~n--g~-~~~~~l~V~----~~~~~~~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~~ 146 (290)
T 2o26_X 75 SNSN--GL-TSSIYVFVR----DPAKLFLVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPKAG 146 (290)
T ss_dssp EESS--SC-EEEEEEEEE----CSSCCBCCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETTTE
T ss_pred EeeC--Cc-cEEEEEEEe----CCCcccccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCCCC
Confidence 9999 43 556677776 3444445556788889999999999985 77 899995 6888876543322222347
Q ss_pred EEEcccCCCCcE-EEEEEEEcCCeeEEE-EEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcc
Q psy2775 168 LTLIQCSTKDKG-RYSVKVTNKEGTVES-AANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDV 245 (785)
Q Consensus 168 L~i~~~~~~d~G-~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 245 (785)
|.|.++..+|+| .|+|.|.|..+.... .+.|.|.... ..+|.+...+...
T Consensus 147 L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~----------------------------~~~P~i~~~~~~~ 198 (290)
T 2o26_X 147 ITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI----------------------------KAIPVVSVPETSH 198 (290)
T ss_dssp EEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCC----------------------------CSCCEEECSCSBC
T ss_pred EEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCC----------------------------CCCCccccCCCcc
Confidence 999999999999 999999998665443 4777776321 1456776666677
Q ss_pred eeCCCCeEEEEEEEccCCCCe-EEEEECCEEc----c---cceEE---EeCCEEEEEEccCCCCCCeEEEEEEEeCCCce
Q psy2775 246 SITEGESAVLSVQVGGEPSPK-VEWYKDGKLI----K---DRQIT---SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV 314 (785)
Q Consensus 246 ~~~~G~~~~l~C~~~g~p~~~-v~W~~~~~~l----~---~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 314 (785)
.+.+|+.+.|.|.+.|.|.+. +.|++++..+ . ..... .......|.|.++..+|+|.|+|.|.|..|..
T Consensus 199 ~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~ 278 (290)
T 2o26_X 199 LLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSA 278 (290)
T ss_dssp CCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred eEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcE
Confidence 889999999999999999986 9999998763 2 11111 12335689999999999999999999999999
Q ss_pred EEEEEEEEecc
Q psy2775 315 ESAANLNVDQG 325 (785)
Q Consensus 315 ~~~~~l~v~~~ 325 (785)
...+.|.|...
T Consensus 279 ~~~~~l~V~~~ 289 (290)
T 2o26_X 279 NVTTTLKVVEK 289 (290)
T ss_dssp EEEEEECC---
T ss_pred EEEEEEEEEeC
Confidence 88888888753
No 54
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.97 E-value=1.7e-30 Score=283.59 Aligned_cols=374 Identities=12% Similarity=0.133 Sum_probs=228.6
Q ss_pred ccceeEeeCccEEEEEEEcCC---CCeEEEEECC--EEcC-----------------CCCcEEEEEc--CcEEEEEEcCC
Q psy2775 333 LDDLEVKERENAVLEVEVTSD---KADVKWFKDG--QEIK-----------------TSKKVTIEKK--GTIRKLLIRNI 388 (785)
Q Consensus 333 ~~~~~~~~g~~~~l~C~~~~~---~~~v~W~~~~--~~l~-----------------~~~~~~~~~~--~~~~~l~i~~~ 388 (785)
+....+.+|+.++|.|.+.+. ...+.|+++. ..+. ...++.+..+ +....|.|.++
T Consensus 8 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (475)
T 1iga_A 8 SGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSL 87 (475)
T ss_pred CCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCC
Confidence 456788999999999999863 5689999852 2110 1234554443 33456999999
Q ss_pred CCCCceEEEEEEeccce----------EEEEEEEe---cCCcccccCCCeEEecCCcEEEEEEEeC--CC-c-eEEEEEC
Q psy2775 389 SVHDEGEYTCSLPDQET----------SAELNVVE---LPPEISVPLQDVKVSRDEKASFEIELTK--GD-A-LVKWYKD 451 (785)
Q Consensus 389 ~~~d~G~Y~C~a~n~~~----------~~~~~v~~---~~~~~~~~~~~~~v~~g~~~~l~C~~~~--~~-~-~i~W~~~ 451 (785)
..+|+|.|.|.+.+..+ ...+.|.. .+|.+.... ...+.+|+.++|.|.+.+ |. + .|.|+++
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~ 166 (475)
T 1iga_A 88 RPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS-LCSTQPDGNVVIACLVQGFFPQEPLSVTWSES 166 (475)
T ss_pred ChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC-ccccCCCCeEEEEEEEeeecCCCceEEEEcCC
Confidence 99999999999987642 23455543 133333322 112368999999999998 33 3 8999998
Q ss_pred CEEcccCCCEEEE--EeCc---EEEEEEccCCCCCcEEEEEEEeecCcceeEEEEEEEcCcccccccCCCeeEEeccCce
Q psy2775 452 GKEIAFSENVTLS--IDGK---KQKLIIFSAGLEDAGEYSCRVGDTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDA 526 (785)
Q Consensus 452 ~~~~~~~~~~~~~--~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 526 (785)
+............ .++. .+.|+|..+..+|+|.|+|.|.|.+....+..+.+..+.. +...
T Consensus 167 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~------~~~~-------- 232 (475)
T 1iga_A 167 GQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPST------PPTP-------- 232 (475)
T ss_pred CcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccC------cccc--------
Confidence 7532111000010 1111 2468898998999999999999973333333333222110 0000
Q ss_pred eEEEEecCCceeeEEeecccccccCCCCCCCCCeE-eeeeeeeeeeecCeEEEEEEEecCCC---CceEEEeCCEEecCC
Q psy2775 527 TFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLF-IERFEEKTVKEKGTIRLMAKVKASPA---PSIVWFRNNKPLLSS 602 (785)
Q Consensus 527 ~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~-~~~~~~~~v~~g~~v~l~C~~~g~P~---p~v~W~~~~~~i~~~ 602 (785)
...|. .|..... .+|.+ +..+....+.+|++++|.|.+.|.|+ +.|+| ++..+...
T Consensus 233 ~~~~~-----------------~~~~~~~-~~p~v~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W--~~~~~~~~ 292 (475)
T 1iga_A 233 SPSTP-----------------PTPSPSC-CHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSA 292 (475)
T ss_pred ccccc-----------------ccCCCCC-CCcEEEEcCCChHHhccCCceEEEEEEEcccCCCceEEEE--CCCCcCCc
Confidence 00000 0100001 12333 33333444689999999999999854 69999 44444322
Q ss_pred CCe-eEEe-eC---CeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCC
Q psy2775 603 PKK-REIF-DG---ENIILELKEADSETDAGDYKVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDS 677 (785)
Q Consensus 603 ~~~-~~~~-~~---~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 677 (785)
... .... ++ ..++|.|.++.. +|+|.|+|.|.|..|.......|.+.
T Consensus 293 ~~~~~~~~~~g~~~~~~~L~I~~~~~-~d~G~Y~C~a~n~~~~~~~~~~v~~~--------------------------- 344 (475)
T 1iga_A 293 VQGPPERDLCGCYSVSSVLPGCAEPW-NHGKTFTCTAAYPESKTPLTATLSKS--------------------------- 344 (475)
T ss_pred cccCceECCCCCEEEEEEEEEchHHh-ccCCcEEEEEEcCCCCCceEEEeecC---------------------------
Confidence 111 1111 11 345799999999 99999999999999986554544331
Q ss_pred CcceeeeeecCccccCCCcCCCCCCcEEeecCCeEEEEEEEecCCC--CceEEeECCEEeeecccccc----c-----hh
Q psy2775 678 PRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRFKALPP--PKAEWTVNGTVIVPSKRVKG----K-----AE 746 (785)
Q Consensus 678 ~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~P~--p~i~W~~~~~~~~~~~~~~~----~-----~~ 746 (785)
.+..+|.+.........+..|+.++|.|.+.|+++ +.|.|+|||..+..+..... . ..
T Consensus 345 -----------~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt 413 (475)
T 1iga_A 345 -----------GNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTT 413 (475)
T ss_pred -----------CCCCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCCceeecccccccCCCCCc
Confidence 12245655443333333678999999999999743 48999999999876641111 1 01
Q ss_pred --hhcccccceeeeeeceEEEEEEeccc----ceeEEeec
Q psy2775 747 --FIKKLDDLEVKERENAVLEVEVTSDK----ADVKWFKN 780 (785)
Q Consensus 747 --~~~~l~~~~v~~~~~~~~~c~~~~~~----~~~~w~~~ 780 (785)
....|.+......+.|.|+|.+.++. ..+.|...
T Consensus 414 ~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~~~~~~~~~~~ 453 (475)
T 1iga_A 414 FAVTSILRVAAEDWKKGDTFSCMVGHEALPLAFTQKTIDR 453 (475)
T ss_pred EEEEEEEEEChHHhcCCCEEEEEEEcCCCCCcceEEEEec
Confidence 11244444445567899999999843 34578654
No 55
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=4e-34 Score=308.62 Aligned_cols=367 Identities=14% Similarity=0.197 Sum_probs=232.5
Q ss_pred eecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEc----c-------------CCCCEEEeecCCccceEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPL----Q-------------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~----~-------------~~~~~~~~~~~~~~~~~~~L 74 (785)
...+..+.+.+|++++|.|.+.+.+ .+.|.|++++ ..+ . ...|+.+..+.. ....+|
T Consensus 3 l~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L 80 (434)
T 1igy_B 3 LQESGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRS--SNTANI 80 (434)
T ss_dssp EECCCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGG--GCBBCE
T ss_pred eECCCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECC--CCEEEE
Confidence 3456778999999999999998764 5789999863 211 0 023444332211 112459
Q ss_pred EEcccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEeECCE
Q psy2775 75 TIKSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYKDGK 152 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~~~g~ 152 (785)
+|.+++.+|+|.|+|.|.|..+.......|.|....+.+|.+........+.+|+.+.|.|.+.|. |.+ .|.|+++|.
T Consensus 81 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~ 160 (434)
T 1igy_B 81 HLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 160 (434)
T ss_dssp EECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTB
T ss_pred EECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCc
Confidence 999999999999999999864433344566776434445665533333345789999999999886 666 999999987
Q ss_pred Ecccce---EEEeC---CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCcccccccee
Q psy2775 153 LIKDRQ---ITSEK---NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTL 226 (785)
Q Consensus 153 ~~~~~~---~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (785)
.+.... ....+ ....|.|.++..+| |.|+|.|.|..+.......+.+...... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~------v~------------ 221 (434)
T 1igy_B 161 SSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCK------PC------------ 221 (434)
T ss_dssp CSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCC------CC------------
T ss_pred CCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCc------cc------------
Confidence 542110 11111 13468999999889 9999999999886443333332210000 00
Q ss_pred eecCCCCC-CCeeeecCCcce-eCCCCeEEEEEEEccCC----CCeEEEEECCEEcccce---E-EEeC----CEEEEEE
Q psy2775 227 QVNTGKPE-KPSILEPLHDVS-ITEGESAVLSVQVGGEP----SPKVEWYKDGKLIKDRQ---I-TSEK----NTHTLTL 292 (785)
Q Consensus 227 ~~~~~~~~-~p~~~~~~~~~~-~~~G~~~~l~C~~~g~p----~~~v~W~~~~~~l~~~~---~-~~~~----~~~~l~i 292 (785)
. ...+. +..++.++.... +.+|+.+.|.|.+.|.+ .+.|.|++++..+.... . ...+ ..+.|.|
T Consensus 222 -~-~~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 299 (434)
T 1igy_B 222 -I-CTVPEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPI 299 (434)
T ss_dssp -C-CCCSSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEEC
T ss_pred -c-CCCCcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEE
Confidence 0 00000 122333333222 78999999999999874 35899999997764211 0 0111 2346999
Q ss_pred ccCCCCCCeEEEEEEEeCCCceEEEEEEEE--e-ccccceeeeccceeEeeCccEEEEEEEcC-CC--CeEEEEECCEEc
Q psy2775 293 IQCSTKDKGRYSVKVTNKEGTVESAANLNV--D-QGKAEFIKKLDDLEVKERENAVLEVEVTS-DK--ADVKWFKDGQEI 366 (785)
Q Consensus 293 ~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v--~-~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~--~~v~W~~~~~~l 366 (785)
.++..+|+|.|+|.|.|..|.......+.+ . ..+|.+...+.......|+.++|.|.+.+ ++ +.++|+++|..+
T Consensus 300 ~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l 379 (434)
T 1igy_B 300 MHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAP 379 (434)
T ss_dssp CHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCC
T ss_pred CHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEec
Confidence 999999999999999998876432222321 1 12333333332222345678999999987 33 389999999988
Q ss_pred CCCCcEEE--EEcCc---EEEEEEcCCCCCCceEEEEEEeccce
Q psy2775 367 KTSKKVTI--EKKGT---IRKLLIRNISVHDEGEYTCSLPDQET 405 (785)
Q Consensus 367 ~~~~~~~~--~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~ 405 (785)
........ ..+|. .+.|.|.....+|+|.|+|.|.|...
T Consensus 380 ~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 380 ENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp SCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTS
T ss_pred CCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCC
Confidence 53221111 22332 23477777777789999999998643
No 56
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.97 E-value=1.5e-31 Score=290.59 Aligned_cols=348 Identities=13% Similarity=0.189 Sum_probs=213.2
Q ss_pred CCcceeCCCCeEEEEEEEccCC--CCeEEEEEC--CEE---cc---------------cceEE--Ee--CCEEEEEEccC
Q psy2775 242 LHDVSITEGESAVLSVQVGGEP--SPKVEWYKD--GKL---IK---------------DRQIT--SE--KNTHTLTLIQC 295 (785)
Q Consensus 242 ~~~~~~~~G~~~~l~C~~~g~p--~~~v~W~~~--~~~---l~---------------~~~~~--~~--~~~~~l~i~~~ 295 (785)
+....+.+|+.++|.|.+.+.+ .+.+.|+|+ +.. +. ..++. .. .....|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 3456788999999999998876 678999984 221 10 01111 11 34578999999
Q ss_pred CCCCCeEEEEEEEeCCC------------ceEEEEEEEEecc---ccceeeeccceeEeeCccEEEEEEEcC--C-CCeE
Q psy2775 296 STKDKGRYSVKVTNKEG------------TVESAANLNVDQG---KAEFIKKLDDLEVKERENAVLEVEVTS--D-KADV 357 (785)
Q Consensus 296 ~~~d~G~Y~C~~~n~~g------------~~~~~~~l~v~~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~--~-~~~v 357 (785)
+.+|+|.|+|.+.|..| .....+.|.|... +|.+........+.+|+.++|.|.+.+ | ++.+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v 166 (457)
T 1hzh_H 87 RSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 166 (457)
T ss_dssp CGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEE
T ss_pred CcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEE
Confidence 99999999999999865 1223456777642 233322233334678999999999987 3 3789
Q ss_pred EEEECCEEcCCCCcEEEE-EcCc---EEEEEEcCCCCCCceEEEEEEeccceEEEEE--EEe------------------
Q psy2775 358 KWFKDGQEIKTSKKVTIE-KKGT---IRKLLIRNISVHDEGEYTCSLPDQETSAELN--VVE------------------ 413 (785)
Q Consensus 358 ~W~~~~~~l~~~~~~~~~-~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~~--v~~------------------ 413 (785)
+|++++..+......... .++. .+.|.|.++..+| |.|+|.|.|..+...+. +..
T Consensus 167 ~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 245 (457)
T 1hzh_H 167 SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELL 245 (457)
T ss_dssp EETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCS
T ss_pred EEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCcccc
Confidence 999998654311111111 1121 2359999999989 99999999976543322 210
Q ss_pred cCCcc-cccCCCeE-EecCCcEEEEEEEeCC-Cc----eEEEEECCEEcccCCCEEEE-E-eCc---EEEEEEccCCCCC
Q psy2775 414 LPPEI-SVPLQDVK-VSRDEKASFEIELTKG-DA----LVKWYKDGKEIAFSENVTLS-I-DGK---KQKLIIFSAGLED 481 (785)
Q Consensus 414 ~~~~~-~~~~~~~~-v~~g~~~~l~C~~~~~-~~----~i~W~~~~~~~~~~~~~~~~-~-~~~---~~~L~i~~~~~~d 481 (785)
.+|.+ ..++.... +.+|+.++|.|.+.+. ++ .|+|+|++..+......... . ++. .+.|.|.....+|
T Consensus 246 ~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d 325 (457)
T 1hzh_H 246 GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN 325 (457)
T ss_dssp SSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHH
T ss_pred CCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccC
Confidence 12332 22222222 5679999999999983 32 89999999887533211111 1 121 1122222323334
Q ss_pred cEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCe
Q psy2775 482 AGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPL 560 (785)
Q Consensus 482 ~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~ 560 (785)
+|.|+|.|.|. +.......+.+... ...+|.
T Consensus 326 ~G~Y~C~a~n~~~~~~~~~~v~~~~~------------------------------------------------~~~~P~ 357 (457)
T 1hzh_H 326 GKEYKCKVSNKALPAPIEKTISKAKG------------------------------------------------QPREPQ 357 (457)
T ss_dssp TCCEEEEEECTTSSSCEEEEECCCCC------------------------------------------------CCBCCE
T ss_pred CCcEEEEEeCCCCCCcceEEEEcccC------------------------------------------------CCCCCe
Confidence 99999999986 33333333322000 000133
Q ss_pred Eeeeee-eeeeeecCeEEEEEEEecCCCC--ceEEEeCCEEecCCCCeeEEe-eCCe----EEEEEccCCCCCCceeEEE
Q psy2775 561 FIERFE-EKTVKEKGTIRLMAKVKASPAP--SIVWFRNNKPLLSSPKKREIF-DGEN----IILELKEADSETDAGDYKV 632 (785)
Q Consensus 561 ~~~~~~-~~~v~~g~~v~l~C~~~g~P~p--~v~W~~~~~~i~~~~~~~~~~-~~~~----~~L~i~~~~~~~d~G~Y~C 632 (785)
+..... ...+..|+ ++|.|.+.|+|+| .|+|+|||.++.......... .++. ..|.|..... +|+|.|+|
T Consensus 358 v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~-~~~g~YtC 435 (457)
T 1hzh_H 358 VYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRW-QQGNVFSC 435 (457)
T ss_dssp EEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECCCEEECCCEECTTSCEEEEEEEEEEHHHH-HTTCCEEE
T ss_pred EEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECcceeecCceeCCCCCEEEEEEEEEChHHc-cCCCeEEE
Confidence 332221 22344455 9999999997544 899999999985432221211 2221 3567776665 78999999
Q ss_pred EEEcCCcc
Q psy2775 633 VATNELGS 640 (785)
Q Consensus 633 ~a~n~~g~ 640 (785)
.|.|....
T Consensus 436 ~a~n~~l~ 443 (457)
T 1hzh_H 436 SVMHEALH 443 (457)
T ss_dssp EEECTTSG
T ss_pred EEEECCCC
Confidence 99998654
No 57
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.97 E-value=2.1e-32 Score=284.56 Aligned_cols=282 Identities=18% Similarity=0.349 Sum_probs=143.9
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEec-CCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAV-PEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
.|+.+...+..+.+.+|++++|.|.+.+. |.+.+.|++++..+....++.+. ..+|+|.+++.+|+|.|+|
T Consensus 7 ~p~p~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~--------~~~L~i~~v~~~D~G~Y~C 78 (334)
T 1ry7_B 7 VPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG--------PQRLQVLNASHEDSGAYSC 78 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec--------cceEEEeecccccCEEEEE
Confidence 34444445899999999999999999876 56899999999988766555432 1459999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCC------------------CCCceecCC----CceEeccCCcEEEEEEEeccCCCeEEE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKP------------------EKPSILEPL----HDVSITEGESAVLSVQVGGEPSPKVEW 147 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~------------------~~p~i~~~~----~~~~~~~G~~v~l~C~~~g~p~~~v~W 147 (785)
.|.|. +.....+.|.|..... .+|.+..+. ....+.+|+.+.|.|.+.|.|.+.+.|
T Consensus 79 ~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W 157 (334)
T 1ry7_B 79 RQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISW 157 (334)
T ss_dssp -----------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEEC
T ss_pred EEEeC-CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEE
Confidence 99998 7666666777653211 134444332 246788999999999999999999999
Q ss_pred eECCEEcccce----EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCcccccc
Q psy2775 148 YKDGKLIKDRQ----ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSEL 223 (785)
Q Consensus 148 ~~~g~~~~~~~----~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 223 (785)
+++|..+.... ........+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~------------------ 219 (334)
T 1ry7_B 158 LKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP------------------ 219 (334)
T ss_dssp CBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC------------------
T ss_pred EECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC------------------
Confidence 99998876542 12233455899999999999999999999999988888888875431
Q ss_pred ceeeecCCCCCCCeeee-cCCcceeCCCCeEEEEEEEccCCCCeEEEEE----CCEEcccc-----eEEE-------eCC
Q psy2775 224 DTLQVNTGKPEKPSILE-PLHDVSITEGESAVLSVQVGGEPSPKVEWYK----DGKLIKDR-----QITS-------EKN 286 (785)
Q Consensus 224 ~~~~~~~~~~~~p~~~~-~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~----~~~~l~~~-----~~~~-------~~~ 286 (785)
.+|.+.. .+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+... .+.. ...
T Consensus 220 ----------~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (334)
T 1ry7_B 220 ----------HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKE 289 (334)
T ss_dssp ----------SSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTT
T ss_pred ----------CCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCcccccccc
Confidence 1233322 2345678899999999999999999999999 66655411 0111 111
Q ss_pred EEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEEeccccce
Q psy2775 287 THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDQGKAEF 329 (785)
Q Consensus 287 ~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~ 329 (785)
...|.|.++..+|+|.|+|.|.|..|....++.|.|...++.+
T Consensus 290 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~ 332 (334)
T 1ry7_B 290 LEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEEL 332 (334)
T ss_dssp CCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCCC-
T ss_pred ccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCCCc
Confidence 2479999999999999999999999999999999998765543
No 58
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.97 E-value=1.8e-30 Score=264.03 Aligned_cols=262 Identities=17% Similarity=0.166 Sum_probs=198.2
Q ss_pred ccceeeeccceeEeeCccEEEEEEEcCCCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEecc-c
Q psy2775 326 KAEFIKKLDDLEVKERENAVLEVEVTSDKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQ-E 404 (785)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~-~ 404 (785)
+|.+...+....+.+|+.++|.|.+.+ .++|++++..+ ......+ ..|.|.++..+|+|.|+|.+.|. .
T Consensus 12 ~P~i~~~~~~~~v~~G~~v~l~C~~~~---~i~W~~~~~~~-----~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~ng~~ 81 (290)
T 2o26_X 12 PPSIHPAQSELIVEAGDTLSLTCIDPD---FVRWTFKTYFN-----EMVENKK--NEWIQEKAEATRTGTYTCSNSNGLT 81 (290)
T ss_dssp CCEESSCSSEEEEETTSCEEEEEECTT---EEEEEEECSSS-----CEEEECS--SEEEETTCCGGGCEEEEEEESSSCE
T ss_pred CCEEeCCCCeEEEcCCCcEEEEECCCC---cEEEecCCcce-----eeecCCC--ceEEEeccCHHhCeEEEEEeeCCcc
Confidence 455555667788999999999999987 99999998876 1122233 45999999999999999999983 2
Q ss_pred eEEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeCCC-ceEEE-EECCEEcccCCCEEEEEeCcEEEEEEccCCCCCc
Q psy2775 405 TSAELNVVELPPEISVPLQDVKVSRDEKASFEIELTKGD-ALVKW-YKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDA 482 (785)
Q Consensus 405 ~~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~-~~i~W-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 482 (785)
....+.|.. ++.+...+....+.+|+.+.|.|.+.++. +.+.| +++|..+....++....++ .|.|.++..+|+
T Consensus 82 ~~~~l~V~~-~~~~~~~~~~~~~~~g~~v~l~C~~~~p~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~v~~~d~ 157 (290)
T 2o26_X 82 SSIYVFVRD-PAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKA---GITIKNVKRAYH 157 (290)
T ss_dssp EEEEEEEEC-SSCCBCCCCCEEEETTSCEEECCCBSCCSCEEEEEEETTSCCCCTTCEEEEETTT---EEEEESCCGGGT
T ss_pred EEEEEEEeC-CCcccccccceEEecCCeEEEeCcCCCCCCceEEEEeCCCcCCCCCCceeeCCCC---CEEEecccHHHC
Confidence 233444444 44444666778888999999999999887 88999 5688887665555444333 699999999999
Q ss_pred E-EEEEEEeecCcce--eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCC
Q psy2775 483 G-EYSCRVGDTGDKE--SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAP 559 (785)
Q Consensus 483 G-~Y~C~a~n~g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p 559 (785)
| .|+|.|.|.+... ..+.|.|.... ..+|
T Consensus 158 G~~Y~C~a~n~~~~~~s~~~~l~V~~~~------------------------------------------------~~~P 189 (290)
T 2o26_X 158 RLCVRCAAQRDGTWLHSDKFTLKVREAI------------------------------------------------KAIP 189 (290)
T ss_dssp TCEEEEEEEETTEEEECCCEEEEEECCC------------------------------------------------CSCC
T ss_pred CCEEEEEEEECCceEEeEEEEEEEEeCC------------------------------------------------CCCC
Confidence 9 9999999974332 34777776321 0126
Q ss_pred eEeeeeeeeeeeecCeEEEEEEEecCCCCc-eEEEeCCEEe----cCCCCeeEE---eeCCeEEEEEccCCCCCCceeEE
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAKVKASPAPS-IVWFRNNKPL----LSSPKKREI---FDGENIILELKEADSETDAGDYK 631 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~-v~W~~~~~~i----~~~~~~~~~---~~~~~~~L~i~~~~~~~d~G~Y~ 631 (785)
.|...+....+.+|+.++|.|.+.|.|.|. |+|+|++..+ ......... ......+|.|.++.. +|+|.|+
T Consensus 190 ~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~d~G~Y~ 268 (290)
T 2o26_X 190 VVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARV-DDSGVFM 268 (290)
T ss_dssp EEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCS-SSCEEEE
T ss_pred ccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCc-ccCeEEE
Confidence 665555567899999999999999999996 9999999873 222222222 223456899999999 9999999
Q ss_pred EEEEcCCcceEEEEEEEEE
Q psy2775 632 VVATNELGSATHGARVTVD 650 (785)
Q Consensus 632 C~a~n~~g~~~~~~~l~V~ 650 (785)
|.|.|..|....++.|.|.
T Consensus 269 C~a~N~~g~~~~~~~l~V~ 287 (290)
T 2o26_X 269 CYANNTFGSANVTTTLKVV 287 (290)
T ss_dssp EEEECSSCEEEEEEEECC-
T ss_pred EEEeCCCCcEEEEEEEEEE
Confidence 9999999999888887775
No 59
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.97 E-value=4.2e-30 Score=264.50 Aligned_cols=285 Identities=18% Similarity=0.265 Sum_probs=203.9
Q ss_pred CCceEecCCCeEEEEEEEE-ecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEEcCCee
Q psy2775 19 TKPVYAEENSEVTLEVRLV-AVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAKNREGE 97 (785)
Q Consensus 19 ~~~~~v~~G~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~ 97 (785)
+..+.|.+|+++.|.|... +.|.+.|.|++++..+....++.+...++. .+|+|.+++.+|+|.|+|.|.|..|.
T Consensus 8 ~~~~~v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~----~~L~I~~~~~~D~G~Y~C~~~n~~g~ 83 (312)
T 2y23_A 8 EVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNK----TKMTFKDLGMDDLGIYSCDVTDTDGI 83 (312)
T ss_dssp CCEEEECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTE----EEEEESSCCGGGCEEEEEEESSSCCC
T ss_pred ceeEEEecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCE----EEEEECcCCccCCEEEEEEEEeCCCc
Confidence 4468899999999999884 568899999999999988888877765432 46999999999999999999998774
Q ss_pred EEEEeeEEEeCCC--------CCCCceecCC-CceEeccCCcEEEEEEEe-ccCCCeEEEeECCEEcccce---EEEe--
Q psy2775 98 AKMDIPVKVNTGK--------PEKPSILEPL-HDVSITEGESAVLSVQVG-GEPSPKVEWYKDGKLIKDRQ---ITSE-- 162 (785)
Q Consensus 98 ~~~~~~v~v~~~~--------~~~p~i~~~~-~~~~~~~G~~v~l~C~~~-g~p~~~v~W~~~g~~~~~~~---~~~~-- 162 (785)
.. ...+.|.... ..+|.+.... ....+.+|+.+.|.|.+. +.|.+.+.|+++|..+.... +...
T Consensus 84 ~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~ 162 (312)
T 2y23_A 84 AS-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRN 162 (312)
T ss_dssp CE-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETT
T ss_pred EE-EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccC
Confidence 43 3444442100 0044443333 277889999999999998 88999999999999987542 2222
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeee-cCCCCCCCeeeec
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQV-NTGKPEKPSILEP 241 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~ 241 (785)
.+..+|.|.+++.+|+|.|+|.|.+..+.......+...... .......++. ......+|.+...
T Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~p~~~~~ 228 (312)
T 2y23_A 163 TGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFK--------------KLQKEAEFQRQEWIRKQGPHFVEY 228 (312)
T ss_dssp TTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHH--------------HHHHHHHHHHHHHHHHHSSEEEEE
T ss_pred CCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhh--------------hhcccccccccchhhccCCceeec
Confidence 456679999999999999999998765444333322100000 0000000000 0000023555544
Q ss_pred CCcceeCCCCeEEEEEEEccCCCC-eEEEEECCEEcc-cceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEE
Q psy2775 242 LHDVSITEGESAVLSVQVGGEPSP-KVEWYKDGKLIK-DRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAAN 319 (785)
Q Consensus 242 ~~~~~~~~G~~~~l~C~~~g~p~~-~v~W~~~~~~l~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~ 319 (785)
+. ..+.+|+.+.|.|.+.+.|.+ .+.|+++|..+. ........+...|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 229 ~~-~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 307 (312)
T 2y23_A 229 LS-WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 307 (312)
T ss_dssp EE-EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEE
T ss_pred ce-EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeE
Confidence 43 678899999999999999988 999999999887 222333355679999999999999999999999999998888
Q ss_pred EEEe
Q psy2775 320 LNVD 323 (785)
Q Consensus 320 l~v~ 323 (785)
|.+.
T Consensus 308 l~i~ 311 (312)
T 2y23_A 308 LVDE 311 (312)
T ss_dssp ECSC
T ss_pred EEec
Confidence 8753
No 60
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=1e-29 Score=258.35 Aligned_cols=272 Identities=18% Similarity=0.218 Sum_probs=203.5
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|...+..+.+.+|++++|.|.+.+ .+.|++++... ........ .++|+|.+++.+|+|.|+|
T Consensus 2 ~p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~~~-----~~~~~~~~----~~~L~i~~~~~~d~G~Y~C 68 (289)
T 3ejj_X 2 DPAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPISPY-----WTLDPESP----GSTLTTRNATFKNTGTYRC 68 (289)
T ss_dssp --CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCSSS-----SEECCCSS----CCEEEESSCCGGGCEEEEE
T ss_pred CCCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCCce-----EEEeccCC----ccEEEEeeeccccCEEEEE
Confidence 46788888899999999999999999876 49999766321 11111111 1459999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCe-EEEeE-CCEEcccceEEEeCCEEE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPK-VEWYK-DGKLIKDRQITSEKNTHT 167 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~-v~W~~-~g~~~~~~~~~~~~~~~~ 167 (785)
.|.+..+.....+.|.|.. +..+ +...+....+.+|+.+.|.|.+.+.+.+. +.|++ ++..+.............
T Consensus 69 ~~~~~~~~~~~~~~l~V~~--~~~~-~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~ 145 (289)
T 3ejj_X 69 TELEDPMAGSTTIHLYVKD--PAHS-WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRG 145 (289)
T ss_dssp ECCC-----CEEEEEEECC--SSCS-EEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTE
T ss_pred EEeccCCcceeEEEEEEeC--CCcc-eecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCC
Confidence 9999888777777888863 1122 45555788899999999999998876664 99986 777765443222222346
Q ss_pred EEEcccCCCCcEEEEEEEE-cCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcce
Q psy2775 168 LTLIQCSTKDKGRYSVKVT-NKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVS 246 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~-n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 246 (785)
|.|.++..+|+|.|+|.|. +..+..+..+.|.|.... +.+|.+...+....
T Consensus 146 L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~----------------------------~~~p~i~~~~~~~~ 197 (289)
T 3ejj_X 146 FIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVH----------------------------PEPPQIKLEPSKLV 197 (289)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSC----------------------------CCCCEEEEESSSEE
T ss_pred EEEeecccccCEEEEEEEEeCCCccccccEEEEEEECC----------------------------CCCCeEEecCCceE
Confidence 9999999999999999999 555555666788886422 14577777777777
Q ss_pred eCCCCeEEEEEEEcc-CCCCeEEEEECCEEcccceEEE-----eCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEE
Q psy2775 247 ITEGESAVLSVQVGG-EPSPKVEWYKDGKLIKDRQITS-----EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANL 320 (785)
Q Consensus 247 ~~~G~~~~l~C~~~g-~p~~~v~W~~~~~~l~~~~~~~-----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 320 (785)
+.+|+.+.|.|.+.+ .|.+.+.|++++..+....... ......|.|.++..+|+|.|+|.|.|..|...+++.|
T Consensus 198 ~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L 277 (289)
T 3ejj_X 198 RIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNF 277 (289)
T ss_dssp CCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEE
T ss_pred EEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEE
Confidence 889999999999988 7899999999999886322211 1125689999999999999999999999999999998
Q ss_pred EEecc
Q psy2775 321 NVDQG 325 (785)
Q Consensus 321 ~v~~~ 325 (785)
.+...
T Consensus 278 ~~~~~ 282 (289)
T 3ejj_X 278 QVVES 282 (289)
T ss_dssp ECC--
T ss_pred EEEec
Confidence 88753
No 61
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=1.5e-29 Score=253.10 Aligned_cols=242 Identities=18% Similarity=0.292 Sum_probs=195.0
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCC-eeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEP-DLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.|.|...|..+.+.+|++++|.|.+.+.|.+ .+.|++++..+.... ..|.|.+++.+|+|.|+|.
T Consensus 1 kP~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~--------------~~l~i~~~~~~d~G~Y~C~ 66 (262)
T 3rjd_A 1 KAVITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTST--------------PSYRITSASVNDSGEYRCQ 66 (262)
T ss_dssp CCEEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCCS--------------SEEEESSCCGGGCEEEEEE
T ss_pred CCeEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeeccC--------------CeEEEecCCcccCeEEEEE
Confidence 4889999999999999999999999888877 999999998876532 2499999999999999999
Q ss_pred EEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcccceEEEeCCEEEEE
Q psy2775 91 AKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIKDRQITSEKNTHTLT 169 (785)
Q Consensus 91 a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L~ 169 (785)
+.|..+.. .+.|.|. .++ +...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... .....|.
T Consensus 67 ~~~~~~s~--~~~l~v~----~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~-----~~~~~l~ 134 (262)
T 3rjd_A 67 RGLSGRSD--PIQLEIH----RGW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF-----HWNSNLT 134 (262)
T ss_dssp ESSSCCCC--CEEEEEE----CSS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EECCCEE
T ss_pred EecCCccc--cEEEEEe----ccc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc-----CCCCeEE
Confidence 99876543 4455665 233 3333445678899999999999 67788899999999887532 1234799
Q ss_pred EcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCC
Q psy2775 170 LIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITE 249 (785)
Q Consensus 170 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 249 (785)
|.+++.+|+|.|+|.|.|..+..+..+.|.|.... .+|.+...+ ...+.+
T Consensus 135 i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~-----------------------------~~p~~~~~~-~~~~~~ 184 (262)
T 3rjd_A 135 ILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELF-----------------------------PAPVLNASV-TSPLLE 184 (262)
T ss_dssp ESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSS-----------------------------CCCEEEESS-CSSEET
T ss_pred EEECChhhCEEEEEEEeCCCCccccceEEEeccCC-----------------------------CCCeEeecC-ceeecC
Confidence 99999999999999999999888888888887542 234555444 556789
Q ss_pred CCeEEEEEEEccCCC-C----eEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCce
Q psy2775 250 GESAVLSVQVGGEPS-P----KVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV 314 (785)
Q Consensus 250 G~~~~l~C~~~g~p~-~----~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~ 314 (785)
|+.+.|.|.+.+.|. + .+.|++++..+.. ......|.|.++..+|+|.|+|.|.|..|..
T Consensus 185 g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~-----~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 185 GNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG-----RNTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp TCCEEEEEECCCCCC-----EEEEEEETTEEEEE-----EESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred CCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc-----cCCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 999999999999875 4 3789999987752 2344589999999999999999999999875
No 62
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.97 E-value=5.5e-33 Score=299.76 Aligned_cols=361 Identities=12% Similarity=0.188 Sum_probs=220.0
Q ss_pred ccceeEeeCccEEEEEEEcCC---CCeEEEEECC--EEc----C-------------CCCcEEEEEc--CcEEEEEEcCC
Q psy2775 333 LDDLEVKERENAVLEVEVTSD---KADVKWFKDG--QEI----K-------------TSKKVTIEKK--GTIRKLLIRNI 388 (785)
Q Consensus 333 ~~~~~~~~g~~~~l~C~~~~~---~~~v~W~~~~--~~l----~-------------~~~~~~~~~~--~~~~~l~i~~~ 388 (785)
+....+.+|+.++|.|.+.+. .+.+.|++++ ..+ . ...++.+..+ +....|.|.++
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (434)
T 1igy_B 6 SGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL 85 (434)
T ss_dssp CCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB
T ss_pred CCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC
Confidence 345678899999999999874 5789999853 211 0 0225544432 22345999999
Q ss_pred CCCCceEEEEEEeccc----eEEEEEEEe---cCCcccccCCCeEEecCCcEEEEEEEeC--CCc-eEEEEECCEEcccC
Q psy2775 389 SVHDEGEYTCSLPDQE----TSAELNVVE---LPPEISVPLQDVKVSRDEKASFEIELTK--GDA-LVKWYKDGKEIAFS 458 (785)
Q Consensus 389 ~~~d~G~Y~C~a~n~~----~~~~~~v~~---~~~~~~~~~~~~~v~~g~~~~l~C~~~~--~~~-~i~W~~~~~~~~~~ 458 (785)
..+|+|.|+|.+.|.. ....+.|.. .+|.+........+.+|+.++|.|.+.+ |.+ .|.|++++..+...
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~ 165 (434)
T 1igy_B 86 TSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 165 (434)
T ss_dssp CGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEE
T ss_pred ChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeE
Confidence 9999999999998742 234555543 2344332222223578999999999987 444 89999998753110
Q ss_pred CCEEEEEeC---cEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecC
Q psy2775 459 ENVTLSIDG---KKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSS 534 (785)
Q Consensus 459 ~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (785)
........+ ..+.|+|..+..+| |.|+|.|.|. |.......+.+..+.....
T Consensus 166 ~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~----------------------- 221 (434)
T 1igy_B 166 TFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPC----------------------- 221 (434)
T ss_dssp ECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCC-----------------------
T ss_pred ecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccc-----------------------
Confidence 000000011 12469999999889 9999999997 5544444443321100000
Q ss_pred CceeeEEeecccccccCCCCCCCCCeEeeeeeeee-eeecCeEEEEEEEecCC----CCceEEEeCCEEecCCCCeeEE-
Q psy2775 535 PDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKT-VKEKGTIRLMAKVKASP----APSIVWFRNNKPLLSSPKKREI- 608 (785)
Q Consensus 535 ~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~-v~~g~~v~l~C~~~g~P----~p~v~W~~~~~~i~~~~~~~~~- 608 (785)
.|.. ...+..++.++.... +.+|++++|.|.+.|.| .+.|+|+|++..+.........
T Consensus 222 --------------~~~~--~~~p~v~~~~p~~~~~v~~G~~~~L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~ 285 (434)
T 1igy_B 222 --------------ICTV--PEVSSVFIFPPKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREE 285 (434)
T ss_dssp --------------CCCC--SSSCCEEEECCCHHHHHSTTSCCEEEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCC
T ss_pred --------------cCCC--CcCcEEEEeCCChHHhcccCCCcEEEEEEeccccCCCCeEEEEEeCCcccCCcccCccee
Confidence 0000 000122232222222 88999999999999984 3589999999877543221111
Q ss_pred eeC----CeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeee
Q psy2775 609 FDG----ENIILELKEADSETDAGDYKVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEV 684 (785)
Q Consensus 609 ~~~----~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (785)
..+ ..++|.|.++.. +|+|.|+|.|.|..|....+..+.+.
T Consensus 286 ~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~~~~~~v~~~---------------------------------- 330 (434)
T 1igy_B 286 QFNSTFRVVSALPIMHQDW-LNGKEFKCRVNSAAFPAPIEKTISKT---------------------------------- 330 (434)
T ss_dssp CCSSSCCCCCCEECCHHHH-HHTCCCBCCBCCSSCSSCCCCCCCCC----------------------------------
T ss_pred CCCCcEEEEEEEEECHHHc-cCCCcEEEEEECCCCCCceeEEEecc----------------------------------
Confidence 111 234699999998 99999999999999865332222211
Q ss_pred eecCccccCCCcCCCCCCcEEeecCCeEEEEEEEecC-CCC-ceEEeECCEEeeecccccc--ch--h--hhccccccee
Q psy2775 685 DVEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRFKAL-PPP-KAEWTVNGTVIVPSKRVKG--KA--E--FIKKLDDLEV 756 (785)
Q Consensus 685 ~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~-P~p-~i~W~~~~~~~~~~~~~~~--~~--~--~~~~l~~~~v 756 (785)
..+..+|.+........ ...|+.++|.|.+.|+ |++ .|+|+|||..+........ .. . ....|.+...
T Consensus 331 ---~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~ 406 (434)
T 1igy_B 331 ---KGKPRAPQVYTIPPPKE-QMAKDKVSLTCMITDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKS 406 (434)
T ss_dssp ---CSCCBCCCCEEECCCSS-SSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHH
T ss_pred ---CCCCcCCEEEEECCCHH-HhcCCcEEEEEEEEeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECch
Confidence 01224555543222211 3357789999999995 433 8999999998854322211 11 1 1123333333
Q ss_pred eeeeceEEEEEEeccc
Q psy2775 757 KERENAVLEVEVTSDK 772 (785)
Q Consensus 757 ~~~~~~~~~c~~~~~~ 772 (785)
...|.|.|+|.|.++.
T Consensus 407 ~~~~~g~YtC~a~n~~ 422 (434)
T 1igy_B 407 NWEAGNTFTCSVLHEG 422 (434)
T ss_dssp HHHTTCCEEEEEEETT
T ss_pred hccCCCEEEEEEEcCC
Confidence 3456899999999854
No 63
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=4e-31 Score=272.44 Aligned_cols=274 Identities=16% Similarity=0.234 Sum_probs=204.0
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecC-CCeeEEEECCEEccC----CCCEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVP-EPDLLWYYNGEPLQE----TDEVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-~~~i~W~~~~~~~~~----~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
+..+......+.+.+|+++.|.|.+.+.| .+.|.|++++..+.. ..++... + ..|.|.+++.+|+|.
T Consensus 5 ~c~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--~------~~L~i~~v~~~D~G~ 76 (315)
T 1itb_B 5 KCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH--K------EKLWFVPAKVEDSGH 76 (315)
T ss_dssp -CCCBCCCCCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC--S------SBEECTTCCGGGCSC
T ss_pred cchhhcCceEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc--C------CeEEECCCChhhCEE
Confidence 34445555688999999999999998887 789999999864321 2233322 1 249999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCC---CceEeccCCcEEEEEEE------eccCCCeEEEeECCEEcccc
Q psy2775 87 YTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPL---HDVSITEGESAVLSVQV------GGEPSPKVEWYKDGKLIKDR 157 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~---~~~~~~~G~~v~l~C~~------~g~p~~~v~W~~~g~~~~~~ 157 (785)
|+|.|.|..+.....+.+.+.. .+|.+...+ ....+..|+.+.|.|.+ .|.|.+.++|+++|..+...
T Consensus 77 Y~C~a~n~~g~~~~~~~v~v~~---~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~ 153 (315)
T 1itb_B 77 YYCVVRNSSYCLRIKISAKFVE---NEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD 153 (315)
T ss_dssp CEECCCSSSCCCCEECCCEEEC---CCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC
T ss_pred EEEEEeCCceEEEEEEEEEEeC---CCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc
Confidence 9999999988777766666654 344443222 23568889999999998 78899999999999998643
Q ss_pred eEEEeCCEEEEEEcccCCCCcEEEEEEEE-cCCeeEE---EEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCC
Q psy2775 158 QITSEKNTHTLTLIQCSTKDKGRYSVKVT-NKEGTVE---SAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKP 233 (785)
Q Consensus 158 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~-n~~g~~~---~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (785)
..........|.|.+++.+|+|.|+|.|. |..|... ..+.+.+.... .+
T Consensus 154 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~---------------------------~~ 206 (315)
T 1itb_B 154 NIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN---------------------------KP 206 (315)
T ss_dssp SSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCC---------------------------CC
T ss_pred cceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCC---------------------------CC
Confidence 22122223379999999999999999999 7777653 23333333211 11
Q ss_pred CCCeeeecCCc-ceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccce-------EEEe--------CCEEEEEEccCCC
Q psy2775 234 EKPSILEPLHD-VSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ-------ITSE--------KNTHTLTLIQCST 297 (785)
Q Consensus 234 ~~p~~~~~~~~-~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~-------~~~~--------~~~~~l~i~~~~~ 297 (785)
.+|.+...+.. ..+.+|+.+.|.|.+.|.|.+.+.|+++|..+.... .... .....|.|.++..
T Consensus 207 ~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 286 (315)
T 1itb_B 207 TRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIES 286 (315)
T ss_dssp CCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCG
T ss_pred CCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCH
Confidence 45666665543 478899999999999999999999999999887321 1111 1245899999999
Q ss_pred CC-CeEEEEEEEeCCCceEEEEEEEEe
Q psy2775 298 KD-KGRYSVKVTNKEGTVESAANLNVD 323 (785)
Q Consensus 298 ~d-~G~Y~C~~~n~~g~~~~~~~l~v~ 323 (785)
+| +|.|+|.|.|..|....++.|.|.
T Consensus 287 ~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 287 RFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp GGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred HHcCCceEEEEecCCCceeEEEEEEec
Confidence 99 999999999999999988888775
No 64
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.97 E-value=1.8e-30 Score=271.79 Aligned_cols=280 Identities=18% Similarity=0.275 Sum_probs=174.5
Q ss_pred Ceeee-cCCceEecCCCeEEEEEEEEecCC-----------CeeEEEECCEE------cc---CCCCEEEeecCCccceE
Q psy2775 13 PTFSK-KTKPVYAEENSEVTLEVRLVAVPE-----------PDLLWYYNGEP------LQ---ETDEVVFSDQSDMHSYV 71 (785)
Q Consensus 13 p~~~~-~~~~~~v~~G~~v~l~C~~~g~p~-----------~~i~W~~~~~~------~~---~~~~~~~~~~~~~~~~~ 71 (785)
+.+.. .+..+.+.+|+++.|.|.+.+.|. +.|.|++++.. +. ...++. ..+
T Consensus 7 ~~~~~~~~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~--~~~------ 78 (349)
T 4dep_C 7 DDWGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS--KEK------ 78 (349)
T ss_dssp EEEEECCCCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEE--EET------
T ss_pred cccccceeeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEe--ecC------
Confidence 34444 367899999999999999987654 89999998831 21 111221 111
Q ss_pred EEEEEcccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-----eccCCCeEE
Q psy2775 72 SIVTIKSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-----GGEPSPKVE 146 (785)
Q Consensus 72 ~~L~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-----~g~p~~~v~ 146 (785)
.+|.|.+++.+|+|.|+|.|.|..+.....+.|.|.......+.....+....+.+|+.+.|.|.+ .|.|.+.+.
T Consensus 79 ~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~ 158 (349)
T 4dep_C 79 DVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTIT 158 (349)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEE
T ss_pred CEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEE
Confidence 259999999999999999999999888888888887522212222222345678899999999985 678899999
Q ss_pred EeECCEEcccc-eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCC-eeE---EEEEEEEeecCCCCCCCCCCCCCCCcccc
Q psy2775 147 WYKDGKLIKDR-QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKE-GTV---ESAANLNVDPYEPKESKETPPSPPPYVVS 221 (785)
Q Consensus 147 W~~~g~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~ 221 (785)
|++||..+... .+...+ ..|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|...+.
T Consensus 159 W~k~~~~l~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~---------------- 220 (349)
T 4dep_C 159 WYMGCYKIQNFNNVIPEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPK---------------- 220 (349)
T ss_dssp EEETTEECCSCSSEEEET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGG----------------
T ss_pred EeeCCEECCCccceeecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCC----------------
Confidence 99999998653 222222 479999999999999999999986 443 4556666653210
Q ss_pred ccceeeecCCCCCCCeeeecCCcc--eeCCCCeEEEEEEEc----cCCCCeEEEEECCEEccc--ceEEE---------e
Q psy2775 222 ELDTLQVNTGKPEKPSILEPLHDV--SITEGESAVLSVQVG----GEPSPKVEWYKDGKLIKD--RQITS---------E 284 (785)
Q Consensus 222 ~~~~~~~~~~~~~~p~~~~~~~~~--~~~~G~~~~l~C~~~----g~p~~~v~W~~~~~~l~~--~~~~~---------~ 284 (785)
...+|.+..+.... .+.+|+.+.|.|.+. +.|.+.+.|+++|..+.. ..... .
T Consensus 221 ----------~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~ 290 (349)
T 4dep_C 221 ----------NAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTE 290 (349)
T ss_dssp ----------GCCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTC
T ss_pred ----------CCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCC
Confidence 00246666555432 678999999999998 578899999999987763 11110 1
Q ss_pred --CCEEEEEEccCCCCCC-eEEEEEEEeCCCceEEEEEEEEeccccc
Q psy2775 285 --KNTHTLTLIQCSTKDK-GRYSVKVTNKEGTVESAANLNVDQGKAE 328 (785)
Q Consensus 285 --~~~~~l~i~~~~~~d~-G~Y~C~~~n~~g~~~~~~~l~v~~~~~~ 328 (785)
....+|.|.++..+|. |.|+|.|.|..|.....+.|.|...+|.
T Consensus 291 ~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~~~p~ 337 (349)
T 4dep_C 291 DETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKVPAPR 337 (349)
T ss_dssp CEEEEECC-------------CEEEEECSSCEEEEECC---------
T ss_pred CcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeecCCCC
Confidence 1134599999999999 9999999999999998888888754443
No 65
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.97 E-value=2.7e-29 Score=260.82 Aligned_cols=278 Identities=16% Similarity=0.224 Sum_probs=198.6
Q ss_pred cccCCCCeeeecCCceEecCCCeEEEEEEEEec----CCCeeEEEECC--EE-------------c--cCCCCEEEeecC
Q psy2775 7 ILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAV----PEPDLLWYYNG--EP-------------L--QETDEVVFSDQS 65 (785)
Q Consensus 7 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~----p~~~i~W~~~~--~~-------------~--~~~~~~~~~~~~ 65 (785)
.+...|+.+...+..+.+.+|++++|.|.+.+. +.+.+.|++++ .. + ....++.+....
T Consensus 9 ~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~ 88 (331)
T 3u83_A 9 QMGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPS 88 (331)
T ss_dssp ------------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCS
T ss_pred ccCCCCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccC
Confidence 344456666778889999999999999999775 44579999954 11 1 122444443111
Q ss_pred CccceEEEEEEcccCCCCCeEEEEE-EEcCCeeEEEEeeEEEeCCCCCCCce--ecCCCceEeccC---CcEEEEEE-Ee
Q psy2775 66 DMHSYVSIVTIKSIKKREEGVYTVV-AKNREGEAKMDIPVKVNTGKPEKPSI--LEPLHDVSITEG---ESAVLSVQ-VG 138 (785)
Q Consensus 66 ~~~~~~~~L~i~~~~~~D~G~Y~C~-a~~~~~~~~~~~~v~v~~~~~~~p~i--~~~~~~~~~~~G---~~v~l~C~-~~ 138 (785)
. ...+|.|.+++.+|+|.|+|. +.+..+.....+.|.|.. +|.+ ........+.+| +.+.|.|. +.
T Consensus 89 ~---~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~ 161 (331)
T 3u83_A 89 F---TDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMA----KPTNWIEGTQAVLRAKKGQDDKVLVATCTSAN 161 (331)
T ss_dssp S---SBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB----CCEEEEEECSSCEEECTTCCCCEEEEEEEEEE
T ss_pred C---CCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEec----CCcceeecCCCceeecCCCccceEEEEEEecC
Confidence 1 124599999999999999998 556677777788888873 4544 334566778888 78999998 78
Q ss_pred ccCCCeEEEeECCEEcccce-EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCC
Q psy2775 139 GEPSPKVEWYKDGKLIKDRQ-ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPP 213 (785)
Q Consensus 139 g~p~~~v~W~~~g~~~~~~~-~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~ 213 (785)
+.|.+.++|++++....... .....+ ...|.|.++..+|+|.|+|.|.|..|..+..+.|.|...
T Consensus 162 ~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~---------- 231 (331)
T 3u83_A 162 GKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYE---------- 231 (331)
T ss_dssp EBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEE----------
T ss_pred CcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecC----------
Confidence 89999999999532221111 111111 246889999999999999999999998888888887632
Q ss_pred CCCCccccccceeeecCCCCCCCeee-ecCCcceeCCCCeEEEEEEEccCCCCe-EEEEECCEEcccceEEEeCCEEEEE
Q psy2775 214 SPPPYVVSELDTLQVNTGKPEKPSIL-EPLHDVSITEGESAVLSVQVGGEPSPK-VEWYKDGKLIKDRQITSEKNTHTLT 291 (785)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~G~~~~l~C~~~g~p~~~-v~W~~~~~~l~~~~~~~~~~~~~l~ 291 (785)
|.+. ..+....+.+|+.+.|.|.+.|+|.+. +.|++++..+...... .. .+|.
T Consensus 232 ----------------------P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~-~~--~~L~ 286 (331)
T 3u83_A 232 ----------------------PEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEA-QN--RTLF 286 (331)
T ss_dssp ----------------------EEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEEE-ET--TEEE
T ss_pred ----------------------CeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccccccee-cC--cEEE
Confidence 3333 334455688999999999999999997 9999999887644322 22 3799
Q ss_pred Ec-cCCCCCCeEEEEEEEeCCCceEEEEEEEEeccc
Q psy2775 292 LI-QCSTKDKGRYSVKVTNKEGTVESAANLNVDQGK 326 (785)
Q Consensus 292 i~-~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~ 326 (785)
|. ++..+|+|.|+|.|.|..|....++.|.|...+
T Consensus 287 i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 287 FKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAA 322 (331)
T ss_dssp ECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC--
T ss_pred EeCCCccccCeEEEEEEEeccccceEEEEEEEeccc
Confidence 99 899999999999999999999888999887643
No 66
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=2.6e-30 Score=267.63 Aligned_cols=263 Identities=14% Similarity=0.136 Sum_probs=194.3
Q ss_pred ecCCceEecCCCeEEEEEEEEec---------CCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCe-E
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAV---------PEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEG-V 86 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~---------p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G-~ 86 (785)
.....+.+.+|+++.|.|.+.+. |.+.|.|++++..+....+. .. + .+|.|.+++.+|+| .
T Consensus 34 ~~~~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~-~~--~------~~L~i~~v~~~D~Gs~ 104 (329)
T 3oq3_B 34 GGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR-VK--N------GDLWIANYTSNDSHRR 104 (329)
T ss_dssp EEEEEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT-EE--T------TEEEESSCCGGGGGCC
T ss_pred CCcceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce-ee--c------ceEEEcCCChHhCCCc
Confidence 33467889999999999999774 55799999999876543332 11 1 35999999999999 9
Q ss_pred EEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccC-CCeEEEeECCEEcccc--eEEEeC
Q psy2775 87 YTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEP-SPKVEWYKDGKLIKDR--QITSEK 163 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p-~~~v~W~~~g~~~~~~--~~~~~~ 163 (785)
|+|.|.|..|.......+.+.. .+|.+........+.+|+.+.|.|.+.|.| .+.+.|+++|..+... .....
T Consensus 105 Y~C~a~n~~g~~~~~~~~~v~~---~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~- 180 (329)
T 3oq3_B 105 YLCTVTTKNGDCVQGIVRSHIR---KPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS- 180 (329)
T ss_dssp EEEEEECTTSCEEEEEEEEEEC---CCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-
T ss_pred EEEEEEeCCCceeeEEEEEEEc---CCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-
Confidence 9999999887654444334432 344444443344467799999999999999 8999999999998532 22222
Q ss_pred CEEEEEEcccCCCCcEEEEEEEEcC--CeeE----EEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCe
Q psy2775 164 NTHTLTLIQCSTKDKGRYSVKVTNK--EGTV----ESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPS 237 (785)
Q Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~a~n~--~g~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 237 (785)
..+|.|.+++.+|+|.|+|.|.|. .|.. +..+.|.|...+.. ..|.
T Consensus 181 -~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~---------------------------~~~~ 232 (329)
T 3oq3_B 181 -GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDH---------------------------RFKL 232 (329)
T ss_dssp -TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCC---------------------------CEEE
T ss_pred -CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCC---------------------------CCce
Confidence 357999999999999999999986 4322 23366777633200 0022
Q ss_pred eeecCCcceeCCCCeEEEEEEEccCC---CC-eEEEEECCEEcc-cce--EE---EeC--CEEEEEEccCCCCCCe-EEE
Q psy2775 238 ILEPLHDVSITEGESAVLSVQVGGEP---SP-KVEWYKDGKLIK-DRQ--IT---SEK--NTHTLTLIQCSTKDKG-RYS 304 (785)
Q Consensus 238 ~~~~~~~~~~~~G~~~~l~C~~~g~p---~~-~v~W~~~~~~l~-~~~--~~---~~~--~~~~l~i~~~~~~d~G-~Y~ 304 (785)
+ .+....+.+|+.+.|.|.+.|.| .+ .+.|+++|..+. ... .. ... ....|.|.++..+|.| .|+
T Consensus 233 ~--~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~ 310 (329)
T 3oq3_B 233 I--LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYT 310 (329)
T ss_dssp E--CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEE
T ss_pred e--cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEE
Confidence 2 44557888999999999999988 77 899999988742 111 11 111 3568999999999999 999
Q ss_pred EEEEeCCCceEEEEEEEE
Q psy2775 305 VKVTNKEGTVESAANLNV 322 (785)
Q Consensus 305 C~~~n~~g~~~~~~~l~v 322 (785)
|.|.|..|....++.|.|
T Consensus 311 C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 311 CRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp EEEECSSCEEEEEEEEEE
T ss_pred EEEEecCCceEEEEEEEe
Confidence 999999999888887766
No 67
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.97 E-value=7.4e-28 Score=263.97 Aligned_cols=381 Identities=14% Similarity=0.161 Sum_probs=228.2
Q ss_pred ecCCceEecCCCeEEEEEEEEecCC----CeeEEEECC--EE---cc-------------CCCCEEEeecCCccceEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVPE----PDLLWYYNG--EP---LQ-------------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p~----~~i~W~~~~--~~---~~-------------~~~~~~~~~~~~~~~~~~~L 74 (785)
..|..+.+.+|++++|.|.+.+.+. ..+.||++. .. +. ...|+.+..+.. ....+|
T Consensus 5 ~qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL 82 (512)
T 1zvo_C 5 QESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTS--RNQFSL 82 (512)
T ss_pred ECCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCC--CCEEEE
Confidence 4577899999999999999986543 679999863 21 10 013444333221 123579
Q ss_pred EEcccCCCCCeEEEEEEEcCCe-----------e--EEEEeeEEEeCCCCCCCceec-CCCceEeccCCcEEEEEEEecc
Q psy2775 75 TIKSIKKREEGVYTVVAKNREG-----------E--AKMDIPVKVNTGKPEKPSILE-PLHDVSITEGESAVLSVQVGGE 140 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~~-----------~--~~~~~~v~v~~~~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g~ 140 (785)
+|.+++.+|+|.|.|.+.+..+ . ......|.|....+.+|.+.. .+.......|+.+.|.|.+.|.
T Consensus 83 ~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~ 162 (512)
T 1zvo_C 83 NLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGY 162 (512)
T ss_pred EECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEee
Confidence 9999999999999999997642 1 112345666543344566542 2111102246899999999886
Q ss_pred -CCC-eEEEeECCEEccc--c-eEEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEE-----------EEEe
Q psy2775 141 -PSP-KVEWYKDGKLIKD--R-QITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAA-----------NLNV 200 (785)
Q Consensus 141 -p~~-~v~W~~~g~~~~~--~-~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~-----------~l~V 200 (785)
|.+ .|+|++++..... . .....++ .+.|.|.....+ .|.|+|.|.|..+...... .+.+
T Consensus 163 ~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l 241 (512)
T 1zvo_C 163 HPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVP 241 (512)
T ss_pred ecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEE
Confidence 655 8999997643210 0 1111111 246888887777 9999999999987655443 2222
Q ss_pred ecCCCCCCCC-CCCCCCCcccccc--------------ce------eeecCCCCCCCee-eecCCcceeCCCCeEEEEEE
Q psy2775 201 DPYEPKESKE-TPPSPPPYVVSEL--------------DT------LQVNTGKPEKPSI-LEPLHDVSITEGESAVLSVQ 258 (785)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~--------------~~------~~~~~~~~~~p~~-~~~~~~~~~~~G~~~~l~C~ 258 (785)
...+...+.. .....|... -.+ .+ +.-..+...+|.+ +.++....+.+|+.++|.|.
T Consensus 242 ~~pp~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~ 320 (512)
T 1zvo_C 242 TAQPQAEGSLAKATTAPATT-RNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCF 320 (512)
T ss_pred eCCCchhccccccccCchhh-ccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEE
Confidence 2111000000 000000000 000 00 0000112234554 34444456778999999999
Q ss_pred EccCCC--CeEEEEECCEEcccc-e---EEE-eCC----EEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEEe-c--
Q psy2775 259 VGGEPS--PKVEWYKDGKLIKDR-Q---ITS-EKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD-Q-- 324 (785)
Q Consensus 259 ~~g~p~--~~v~W~~~~~~l~~~-~---~~~-~~~----~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~-~-- 324 (785)
+.|.++ ..|+|+++|..+... . ... .++ .+.|.|.....+|+|.|+|.|.|..+... ...+... .
T Consensus 321 v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~ 399 (512)
T 1zvo_C 321 VVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQ 399 (512)
T ss_pred EeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCC
Confidence 988643 389999999876511 1 111 111 24699999999999999999999876543 2222221 1
Q ss_pred --cccceeeeccceeEeeCccEE-EEEEEcC-CC--CeEEEEECCEEcCCCCcE----EEEEcCc----EEEEEEcCCCC
Q psy2775 325 --GKAEFIKKLDDLEVKERENAV-LEVEVTS-DK--ADVKWFKDGQEIKTSKKV----TIEKKGT----IRKLLIRNISV 390 (785)
Q Consensus 325 --~~~~~~~~~~~~~~~~g~~~~-l~C~~~~-~~--~~v~W~~~~~~l~~~~~~----~~~~~~~----~~~l~i~~~~~ 390 (785)
.+|.+....... .|+.+. |.|.+.+ ++ ..++|+++|..+...... ....++. .+.|.|.....
T Consensus 400 ~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~ 476 (512)
T 1zvo_C 400 APVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPS 476 (512)
T ss_pred CCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhc
Confidence 123322222221 788899 9999997 33 368999999998754311 1222332 24577888778
Q ss_pred CCceEEEEEEeccce
Q psy2775 391 HDEGEYTCSLPDQET 405 (785)
Q Consensus 391 ~d~G~Y~C~a~n~~~ 405 (785)
+|.|.|+|.|.|...
T Consensus 477 ~~~g~YtC~v~h~~l 491 (512)
T 1zvo_C 477 PQPATYTCVVSHEDS 491 (512)
T ss_pred CCCCeEEEEEEecCC
Confidence 889999999998654
No 68
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.97 E-value=2.8e-29 Score=259.89 Aligned_cols=257 Identities=18% Similarity=0.203 Sum_probs=189.7
Q ss_pred cceeEeeCccEEEEEEEcC----------CCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCce-EEEEEEec
Q psy2775 334 DDLEVKERENAVLEVEVTS----------DKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEG-EYTCSLPD 402 (785)
Q Consensus 334 ~~~~~~~g~~~~l~C~~~~----------~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~a~n 402 (785)
....+.+|+.+.|.|.+.+ +.+.++|++++..+....+. ...+ .|.|.++..+|+| .|+|.|.|
T Consensus 37 ~~v~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~~~~---~L~i~~v~~~D~Gs~Y~C~a~n 111 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VKNG---DLWIANYTSNDSHRRYLCTVTT 111 (329)
T ss_dssp EEEEECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--EETT---EEEESSCCGGGGGCCEEEEEEC
T ss_pred ceEEEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--eecc---eEEEcCCChHhCCCcEEEEEEe
Confidence 4556889999999999876 45799999999876543332 2333 3999999999999 99999999
Q ss_pred cceE----EEEEEEecCCcccccCCCeEEecCCcEEEEEEEeC-C-CceEEEEECCEEcccCC-CEEEEEeCcEEEEEEc
Q psy2775 403 QETS----AELNVVELPPEISVPLQDVKVSRDEKASFEIELTK-G-DALVKWYKDGKEIAFSE-NVTLSIDGKKQKLIIF 475 (785)
Q Consensus 403 ~~~~----~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~-~~~i~W~~~~~~~~~~~-~~~~~~~~~~~~L~i~ 475 (785)
..+. ....++..||.+..+.....+.+|+.+.|.|.+.+ | .+.+.|+|++..+.... ++... + ..|.|.
T Consensus 112 ~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~-~---~~L~I~ 187 (329)
T 3oq3_B 112 KNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS-G---QNLIIH 187 (329)
T ss_dssp TTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE-T---TEEEEC
T ss_pred CCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC-C---CEEEEe
Confidence 7632 22244555655544433334567999999999988 5 68999999999985333 33322 2 479999
Q ss_pred cCCCCCcEEEEEEEeec---CcceeE----EEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccccc
Q psy2775 476 SAGLEDAGEYSCRVGDT---GDKESK----ATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVP 548 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~---g~~~~~----~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 548 (785)
+++.+|+|.|+|.|.|. |..... +.|.|..++...
T Consensus 188 ~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~-------------------------------------- 229 (329)
T 3oq3_B 188 NPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHR-------------------------------------- 229 (329)
T ss_dssp SCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCC--------------------------------------
T ss_pred ecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCC--------------------------------------
Confidence 99999999999999983 333333 667777653110
Q ss_pred ccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCC---CC-ceEEEeCCEEec-CCCCeeEE--eeC--CeEEEEEc
Q psy2775 549 TCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASP---AP-SIVWFRNNKPLL-SSPKKREI--FDG--ENIILELK 619 (785)
Q Consensus 549 ~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P---~p-~v~W~~~~~~i~-~~~~~~~~--~~~--~~~~L~i~ 619 (785)
.|.+ .+....+.+|++++|.|.+.|.| .| .+.|+|+|..+. .+.+.... ..+ ...+|.|.
T Consensus 230 ---------~~~~--~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~ 298 (329)
T 3oq3_B 230 ---------FKLI--LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFE 298 (329)
T ss_dssp ---------EEEE--CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEES
T ss_pred ---------Ccee--cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEE
Confidence 0112 33456889999999999999998 77 889999999853 33322211 122 45789999
Q ss_pred cCCCCCCce-eEEEEEEcCCcceEEEEEEEE
Q psy2775 620 EADSETDAG-DYKVVATNELGSATHGARVTV 649 (785)
Q Consensus 620 ~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~V 649 (785)
++.. +|+| .|+|.|.|..|....++.|.|
T Consensus 299 ~v~~-~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 299 NVTE-EYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp SCCG-GGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred eccH-HHCCCcEEEEEEecCCceEEEEEEEe
Confidence 9999 9999 999999999999999888877
No 69
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.97 E-value=7.9e-31 Score=273.26 Aligned_cols=279 Identities=19% Similarity=0.246 Sum_probs=212.3
Q ss_pred cccCCCCeeeecCCceEecCCCeEEEEEEEE-------ecCCCeeEEEECCEEc--cCCCCEEEeecCCccceEEEEEEc
Q psy2775 7 ILEGIPPTFSKKTKPVYAEENSEVTLEVRLV-------AVPEPDLLWYYNGEPL--QETDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 7 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~-------g~p~~~i~W~~~~~~~--~~~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
......|.|...|..+.+.+|++++|.|.+. +.|.+.|.|++++..+ .......+...+ .+|.|.
T Consensus 13 ~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~------~~L~i~ 86 (339)
T 3o4o_C 13 GAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQD------GALWLL 86 (339)
T ss_dssp -----CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEET------TEEEES
T ss_pred CcchhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeC------CeEEEC
Confidence 3456779999999999999999999999997 8889999999999873 332122222222 249999
Q ss_pred ccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCce--ecCCCceEeccCCcEEEEEE-----EeccCCCeEEEeEC
Q psy2775 78 SIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSI--LEPLHDVSITEGESAVLSVQ-----VGGEPSPKVEWYKD 150 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i--~~~~~~~~~~~G~~v~l~C~-----~~g~p~~~v~W~~~ 150 (785)
+++.+|+|.|+|.+.|..+.....+.|.|.. +|.. ........+.+|+.+.|.|. +.|.|.+.+.|+++
T Consensus 87 ~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~----~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~ 162 (339)
T 3o4o_C 87 PALQEDSGTYVCTTRNASYCDKMSIELRVFE----NTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKD 162 (339)
T ss_dssp SBCTTCCEEEECCEEETTEEEEEEEEEEEEC----SCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEES
T ss_pred CCCcccCEEEEEEEECCcceEEEEEEEEEEc----CCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecC
Confidence 9999999999999999999888888888874 2221 11122347889999999999 78889999999999
Q ss_pred CEEcccc--eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCe----eEEEEEEEEeecCCCCCCCCCCCCCCCccccccc
Q psy2775 151 GKLIKDR--QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEG----TVESAANLNVDPYEPKESKETPPSPPPYVVSELD 224 (785)
Q Consensus 151 g~~~~~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~ 224 (785)
|..+... ......+...|.|.+++.+|+|.|+|.|.|..| ..+..+.|.|....+
T Consensus 163 g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~------------------- 223 (339)
T 3o4o_C 163 SLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKE------------------- 223 (339)
T ss_dssp SCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCC-------------------
T ss_pred CeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCC-------------------
Confidence 9988654 333334445899999999999999999999886 456677888864321
Q ss_pred eeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEE---ccCC-CCeEEEEECCEEcccc----------eEEEe-CC---
Q psy2775 225 TLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQV---GGEP-SPKVEWYKDGKLIKDR----------QITSE-KN--- 286 (785)
Q Consensus 225 ~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~---~g~p-~~~v~W~~~~~~l~~~----------~~~~~-~~--- 286 (785)
..+|.+...+....+.+|+.+.|.|.+ .|.| .+.+.|+++|..+... ..... .+
T Consensus 224 --------~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 295 (339)
T 3o4o_C 224 --------ETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENY 295 (339)
T ss_dssp --------CCCCEECCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCE
T ss_pred --------CCCCEEecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceE
Confidence 134677777777788999999999999 8999 8899999998765311 11111 11
Q ss_pred -EEEEEEccCCCCCC-eEEEEEEEeCCCceEEEEEEEE
Q psy2775 287 -THTLTLIQCSTKDK-GRYSVKVTNKEGTVESAANLNV 322 (785)
Q Consensus 287 -~~~l~i~~~~~~d~-G~Y~C~~~n~~g~~~~~~~l~v 322 (785)
...|.|.++..+|. |.|+|.|.|..|.....+.+.+
T Consensus 296 ~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~ 333 (339)
T 3o4o_C 296 IEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333 (339)
T ss_dssp EEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC
T ss_pred EEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhH
Confidence 22799999999997 9999999999998776655544
No 70
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.97 E-value=9.1e-29 Score=251.37 Aligned_cols=265 Identities=18% Similarity=0.191 Sum_probs=197.5
Q ss_pred ccceeeeccceeEeeCccEEEEEEEcCCCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccc-
Q psy2775 326 KAEFIKKLDDLEVKERENAVLEVEVTSDKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQE- 404 (785)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~- 404 (785)
++.+...+....+.+|+.++|.|.+.+ .++|++++.... .....+....|.|.++..+|+|.|+|.+.|..
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~~~---~v~W~~~~~~~~-----~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 75 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVSNG---SVEWDGPISPYW-----TLDPESPGSTLTTRNATFKNTGTYRCTELEDPM 75 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEECSS---CCEEECSCSSSS-----EECCCSSCCEEEESSCCGGGCEEEEEECCC---
T ss_pred CcEecCCCceEEECCCCCEEEEEEeCC---cEEEccCCCceE-----EEeccCCccEEEEeeeccccCEEEEEEEeccCC
Confidence 344444556678899999999999877 599997764221 11122233459999999999999999998643
Q ss_pred ---eEEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeCCC-ce-EEEEE-CCEEcccCCCEEEEEeCcEEEEEEccCC
Q psy2775 405 ---TSAELNVVELPPEISVPLQDVKVSRDEKASFEIELTKGD-AL-VKWYK-DGKEIAFSENVTLSIDGKKQKLIIFSAG 478 (785)
Q Consensus 405 ---~~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~-~~-i~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~ 478 (785)
....+.|...+..+...+....+.+|+.+.|.|.+.+++ +. +.|++ ++..+....++.+..++ .|.|.+++
T Consensus 76 ~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~ 152 (289)
T 3ejj_X 76 AGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWR---GFIIRKAK 152 (289)
T ss_dssp --CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTT---EEEESSCC
T ss_pred cceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCC---CEEEeecc
Confidence 344555555444455566778899999999999999843 33 99986 67777666666655444 59999999
Q ss_pred CCCcEEEEEEEeec--CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCC
Q psy2775 479 LEDAGEYSCRVGDT--GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPG 556 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~--g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 556 (785)
.+|+|.|+|.|.|. +.....+.|.|.....
T Consensus 153 ~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~------------------------------------------------ 184 (289)
T 3ejj_X 153 VLDSNTYVCKTMVNGRESTSTGIWLKVNRVHP------------------------------------------------ 184 (289)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEESSCC------------------------------------------------
T ss_pred cccCEEEEEEEEeCCCccccccEEEEEEECCC------------------------------------------------
Confidence 99999999999953 5556677888874310
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEec-CCCCceEEEeCCEEecCCCCeeEE--eeCCeEEEEEccCCCCCCceeEEEE
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKA-SPAPSIVWFRNNKPLLSSPKKREI--FDGENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P~p~v~W~~~~~~i~~~~~~~~~--~~~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
.+|.+...+....+.+|++++|.|.+.| .|.|.+.|++++..+......... ......+|.|.++.. +|+|.|+|.
T Consensus 185 ~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~ 263 (289)
T 3ejj_X 185 EPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDF-QDAGIYSCV 263 (289)
T ss_dssp CCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCS-SSCEEEEEE
T ss_pred CCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecc-cCCEEEEEE
Confidence 1266666666777889999999999999 799999999999988654221110 112256899999999 999999999
Q ss_pred EEcCCcceEEEEEEEEE
Q psy2775 634 ATNELGSATHGARVTVD 650 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~ 650 (785)
|.|..|...+++.|.+.
T Consensus 264 a~N~~G~~~~s~~L~~~ 280 (289)
T 3ejj_X 264 ASNDVGTRTATMNFQVV 280 (289)
T ss_dssp EECSSCEEEEEEEEECC
T ss_pred EEcCCCCccccEEEEEE
Confidence 99999999999998876
No 71
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.97 E-value=4.3e-30 Score=263.68 Aligned_cols=267 Identities=15% Similarity=0.163 Sum_probs=192.3
Q ss_pred ceEecCCCeEEEEEEEEec-CCCeeEEEECCEEccC-----------------CCCEEEeecCCccceEEEEEEcccCCC
Q psy2775 21 PVYAEENSEVTLEVRLVAV-PEPDLLWYYNGEPLQE-----------------TDEVVFSDQSDMHSYVSIVTIKSIKKR 82 (785)
Q Consensus 21 ~~~v~~G~~v~l~C~~~g~-p~~~i~W~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~L~i~~~~~~ 82 (785)
.+++.+|++++|.|.+.+. +.+.|.|+|++..... ..++.+..... ..++|+|.+++.+
T Consensus 8 ~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~sL~I~~v~~~ 84 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSL---NDATITLHNIGFS 84 (308)
T ss_dssp SCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSS---SBCCEEECSCCGG
T ss_pred EeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCC---CceEEEEccCCHH
Confidence 6789999999999998654 4457999986532110 11222211111 1245999999999
Q ss_pred CCeEEEEEEEcC-CeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcccceEE
Q psy2775 83 EEGVYTVVAKNR-EGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIKDRQIT 160 (785)
Q Consensus 83 D~G~Y~C~a~~~-~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~~~ 160 (785)
|+|.|+|.|.+. .+.......+.+... ..+.+...+.......|+.+.|.|.+ .|.|.+.|+|++++..+......
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~ 162 (308)
T 4fom_A 85 DSGKYICKAVTFPLGNAQSSTTVTVLVE--PTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTS 162 (308)
T ss_dssp GCEEEEEEEEETTTEEEEEEEEEEEEBC--CEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEE
T ss_pred HCEEEEEEEeeCCCcceeeeeEEEeeec--cccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccce
Confidence 999999999875 556666666776531 12223344455666778999999986 67899999999999888655333
Q ss_pred EeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEE--EEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCC
Q psy2775 161 SEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESA--ANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPE 234 (785)
Q Consensus 161 ~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (785)
.... .+.|.|.++..+|+|.|+|.|.|..+..... +.|.|..
T Consensus 163 ~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~-------------------------------- 210 (308)
T 4fom_A 163 FPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQY-------------------------------- 210 (308)
T ss_dssp CTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCE--------------------------------
T ss_pred eeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEec--------------------------------
Confidence 2221 3479999999999999999999987654443 4444432
Q ss_pred CCeeee-cCCcceeCCCCeEEEEEEEccCCCC-eEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy2775 235 KPSILE-PLHDVSITEGESAVLSVQVGGEPSP-KVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEG 312 (785)
Q Consensus 235 ~p~~~~-~~~~~~~~~G~~~~l~C~~~g~p~~-~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g 312 (785)
+|.+.. ......+..|+.++|.|.+.|+|.+ .+.|+|++..+..... ..+...|.|.+++.+|+|.|+|.|.|..|
T Consensus 211 ~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~--~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G 288 (308)
T 4fom_A 211 APEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL--ASDNTLHFVHPLTFNYSGVYICKVTNSLG 288 (308)
T ss_dssp EEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB--CSTTEEECCSCCCSCCCSEEEEEEEETTE
T ss_pred CCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE--EcCCeEEEECCCChhhCEEEEEEEEeCCC
Confidence 233322 2334566788999999999999988 6999999887764322 22345677899999999999999999999
Q ss_pred ceEEEEEEEEeccc
Q psy2775 313 TVESAANLNVDQGK 326 (785)
Q Consensus 313 ~~~~~~~l~v~~~~ 326 (785)
....++.|.|.++|
T Consensus 289 ~~~~~~~l~V~~~P 302 (308)
T 4fom_A 289 QRSDQKVIYISDPP 302 (308)
T ss_dssp EEEEEEECCEECCC
T ss_pred cEEEEEEEEEEcCC
Confidence 99999999998754
No 72
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=1.8e-28 Score=253.78 Aligned_cols=270 Identities=15% Similarity=0.258 Sum_probs=182.4
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEec-CCCeeEEEECCEEcc---------CCCCEEEeecCC-ccceEEEEEEccc
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAV-PEPDLLWYYNGEPLQ---------ETDEVVFSDQSD-MHSYVSIVTIKSI 79 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~~i~W~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~L~i~~~ 79 (785)
.+..|...|..+.+.+|++++|.|.+.+. |.+.|.|++++..+. ...++....+.. ......+|+|.++
T Consensus 2 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 2 EELQVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp CCCCEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred ceeEEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence 35678888999999999999999999887 888999999875321 111333221110 0012245999999
Q ss_pred CCCCCeEEEEEEEcCCeeE-----EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCC--eEEEeECCE
Q psy2775 80 KKREEGVYTVVAKNREGEA-----KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSP--KVEWYKDGK 152 (785)
Q Consensus 80 ~~~D~G~Y~C~a~~~~~~~-----~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~--~v~W~~~g~ 152 (785)
+.+|+|.|+|.|.|..+.. ...+.|.|.. .+.+|.+..+ ...+.+|+.+.|.|.+.|.|++ .++|++||.
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~-~p~~p~i~~~--~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~ 158 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRA-KPSAPVVSGP--AARATPQHTVSFTCESHGFSPRDITLKWFKNGN 158 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEB-CCCCCEEECC--SSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEEe-cCCCceeecc--ccccCCCCEEEEEEEEeCccCCCcEEEEEECCE
Confidence 9999999999999876531 1335666653 3344555432 3667899999999999987765 899999999
Q ss_pred EcccceEEEe----CC----EEEEEEcccCCCCcEEEEEEEEcCCee---EEEEEEEEeecCCCCCCCCCCCCCCCcccc
Q psy2775 153 LIKDRQITSE----KN----THTLTLIQCSTKDKGRYSVKVTNKEGT---VESAANLNVDPYEPKESKETPPSPPPYVVS 221 (785)
Q Consensus 153 ~~~~~~~~~~----~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~ 221 (785)
.+........ .+ ...|.|.....+|.|.|+|.|.|..+. ......+.+...
T Consensus 159 ~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~------------------ 220 (327)
T 2wng_A 159 ELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIR------------------ 220 (327)
T ss_dssp ECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBC------------------
T ss_pred EccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccC------------------
Confidence 9875532111 11 235778877778889999999998765 233333322211
Q ss_pred ccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccC-CCC-eEEEEECCEEcccc---eEE-EeCC----EEEEE
Q psy2775 222 ELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYKDGKLIKDR---QIT-SEKN----THTLT 291 (785)
Q Consensus 222 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~~-~v~W~~~~~~l~~~---~~~-~~~~----~~~l~ 291 (785)
.+|.+...+.. +.+|+.+.|.|.+.|. |++ .+.|+++|..+... ... ..++ ...|.
T Consensus 221 ------------~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~ 286 (327)
T 2wng_A 221 ------------VPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLL 286 (327)
T ss_dssp ------------BCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEE
T ss_pred ------------CCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEE
Confidence 34555554333 7799999999999985 444 89999999987621 111 1222 14689
Q ss_pred EccCCCCCCeEEEEEEEeCCCceE
Q psy2775 292 LIQCSTKDKGRYSVKVTNKEGTVE 315 (785)
Q Consensus 292 i~~~~~~d~G~Y~C~~~n~~g~~~ 315 (785)
|..+..+|+|.|+|.|.|..+...
T Consensus 287 i~~~~~~d~G~Y~C~a~N~~~~~~ 310 (327)
T 2wng_A 287 VNVSAHRDDVKLTCQVEHDGQPAV 310 (327)
T ss_dssp C-------CCEEEEEEEETTCCCE
T ss_pred EccccccCCCEEEEEEEeCCCCCc
Confidence 999999999999999999987654
No 73
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.96 E-value=3.4e-27 Score=250.96 Aligned_cols=349 Identities=17% Similarity=0.177 Sum_probs=236.5
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEEC--CEEccC-----CCCEEEeecCCccceEEEEEEcccCCCCC
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYN--GEPLQE-----TDEVVFSDQSDMHSYVSIVTIKSIKKREE 84 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~--~~~~~~-----~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 84 (785)
+|+|.. +.+..+.+|++++|.|.+.|.|.+.|.|+++ +..+.. ..++.+.... ..+.|+|.+++.+|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~L~i~~v~~~D~ 75 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH----GSSSLHIKDVKLSDS 75 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECS----SEEEEEEESCCGGGC
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccC----CcceEEEcccChhhC
Confidence 588887 6678888999999999999999999999999 887754 3455554432 235799999999999
Q ss_pred eEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc-----eE
Q psy2775 85 GVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR-----QI 159 (785)
Q Consensus 85 G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~-----~~ 159 (785)
|.|+|.|.|..|.....+.|.|. .+|.+........+.+|+.+.|.|.+.|.|.+.+.|+++|..+... ..
T Consensus 76 G~Y~C~a~n~~g~~~~~~~l~V~----~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~ 151 (389)
T 2jll_A 76 GRYDCEAASRIGGHQKSMYLDIE----YAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKT 151 (389)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEE----EEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEE
T ss_pred EEEEEEEEeCCCCcceEEEEEEE----eCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEE
Confidence 99999999999998888888887 5777777666667899999999999999999999999999998653 23
Q ss_pred EEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeee
Q psy2775 160 TSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSIL 239 (785)
Q Consensus 160 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 239 (785)
.......+|.|.++..+|+|.|+|.|.|..|.....+.+.+...+ .+|..+
T Consensus 152 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P-----------------------------~~P~~~ 202 (389)
T 2jll_A 152 YSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVP-----------------------------SSPYGV 202 (389)
T ss_dssp EECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCC-----------------------------CCCEEE
T ss_pred eccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCC-----------------------------CCCcce
Confidence 334556789999999999999999999999998888877775432 333222
Q ss_pred ecCCcceeCCCCeEEEEEEEc----cCCCC--eEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCc
Q psy2775 240 EPLHDVSITEGESAVLSVQVG----GEPSP--KVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGT 313 (785)
Q Consensus 240 ~~~~~~~~~~G~~~~l~C~~~----g~p~~--~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~ 313 (785)
.. ....+..+.|.|... +.|.. .+.|.+++.... ...........+.|.++...+.|.|+|.|.|..|.
T Consensus 203 ~~----~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~-~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~ 277 (389)
T 2jll_A 203 KI----IELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIW-KIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQ 277 (389)
T ss_dssp EE----EEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCC-EEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCB
T ss_pred EE----eeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCccc-EEeeccCCcceEEECCccCCCEEEEEEEEEcCCcc
Confidence 11 112356788888742 22322 467888764221 12222334467999999999999999999999887
Q ss_pred eEEEEEEEEeccccceeeeccc-eeEeeCccEEEEEEEcCC-C---C--eEEEEECCEEcCCCCcEEEEEcCcEEEEEEc
Q psy2775 314 VESAANLNVDQGKAEFIKKLDD-LEVKERENAVLEVEVTSD-K---A--DVKWFKDGQEIKTSKKVTIEKKGTIRKLLIR 386 (785)
Q Consensus 314 ~~~~~~l~v~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~-~---~--~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~ 386 (785)
...+..+.+...+......+.. ........+.|....... . . .+.|...+..- ........+....+.|.
T Consensus 278 ~~~s~~~~~~t~~~~~p~~p~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~~i~ 354 (389)
T 2jll_A 278 GDYSKIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKED---QWLEKKVQGNKDHIILE 354 (389)
T ss_dssp CCCCCCEEEECCCCCCCCCCCEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC--------CCBCCEECTTCCEEEEC
T ss_pred CCCCcceEEEecCCCCCCCCccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCc---ceeEeeccCCcceEEeC
Confidence 6544333333211111111111 111234556666653221 1 1 22222211100 00011122233347888
Q ss_pred CCCCCCceEEEEEEeccceE
Q psy2775 387 NISVHDEGEYTCSLPDQETS 406 (785)
Q Consensus 387 ~~~~~d~G~Y~C~a~n~~~~ 406 (785)
++.......|+..|.|..|.
T Consensus 355 ~L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 355 HLQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp SCCTTCEEEEEEEEEC-CCB
T ss_pred CcCCCCEEEEEEEEEcCCcC
Confidence 88888788888888886553
No 74
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.96 E-value=1.7e-28 Score=245.50 Aligned_cols=247 Identities=19% Similarity=0.261 Sum_probs=185.4
Q ss_pred ceeeeccceeEeeCccEEEEEEEcC-CCC-eEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccce
Q psy2775 328 EFIKKLDDLEVKERENAVLEVEVTS-DKA-DVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQET 405 (785)
Q Consensus 328 ~~~~~~~~~~~~~g~~~~l~C~~~~-~~~-~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~ 405 (785)
.+...+....+.+|+.+.|.|.+.+ +.+ .++|+++|..+.... ..|.|.++..+|+|.|+|.+.|..+
T Consensus 3 ~i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~----------~~l~i~~~~~~d~G~Y~C~~~~~~~ 72 (262)
T 3rjd_A 3 VITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTST----------PSYRITSASVNDSGEYRCQRGLSGR 72 (262)
T ss_dssp EEEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEESSSCC
T ss_pred eEecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEECCEEeeccC----------CeEEEecCCcccCeEEEEEEecCCc
Confidence 3445556678899999999999987 445 899999999886542 2399999999999999999998665
Q ss_pred EEEEEEEecCCcccccCCCeEEecCCcEEEEEEEe-C-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcE
Q psy2775 406 SAELNVVELPPEISVPLQDVKVSRDEKASFEIELT-K-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAG 483 (785)
Q Consensus 406 ~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~-~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 483 (785)
+..+.+....+.+...+....+.+|+.+.|.|.+. + +.+.+.|++++..+... . ....|.|.+++.+|+|
T Consensus 73 s~~~~l~v~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~------~--~~~~l~i~~~~~~d~G 144 (262)
T 3rjd_A 73 SDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF------H--WNSNLTILKTNISHNG 144 (262)
T ss_dssp CCCEEEEEECSSEEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE------E--ECCCEEESSCCGGGCE
T ss_pred cccEEEEEeccceEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc------C--CCCeEEEEECChhhCE
Confidence 54444332233333444566788999999999994 4 56689999999887422 1 1246999999999999
Q ss_pred EEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEe
Q psy2775 484 EYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFI 562 (785)
Q Consensus 484 ~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~ 562 (785)
.|+|.|.|. +.....+.|.|..+.. +|.+.
T Consensus 145 ~Y~C~~~n~~~~~~~~~~l~V~~~~~-------------------------------------------------~p~~~ 175 (262)
T 3rjd_A 145 TYHCSGMGKHRYTSAGISVTVKELFP-------------------------------------------------APVLN 175 (262)
T ss_dssp EEEEEEESSSEEEEECEEEEEECSSC-------------------------------------------------CCEEE
T ss_pred EEEEEEeCCCCccccceEEEeccCCC-------------------------------------------------CCeEe
Confidence 999999997 6666677888876421 13332
Q ss_pred eeeeeeeeeecCeEEEEEEEecCCC-Cc----eEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 563 ERFEEKTVKEKGTIRLMAKVKASPA-PS----IVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 563 ~~~~~~~v~~g~~v~l~C~~~g~P~-p~----v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
... ...+.+|+.++|.|.+.|.|. |. +.|++++..+... .....|.|.++.. +|+|.|+|.|.|.
T Consensus 176 ~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~~--------~~~~~L~i~~v~~-~d~G~Y~C~a~n~ 245 (262)
T 3rjd_A 176 ASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGR--------NTSSEYQILTARR-EDSGLYWCEAATE 245 (262)
T ss_dssp ESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEEE--------ESCCEEEESSCCG-GGCEEEEEEEEET
T ss_pred ecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEeccc--------CCCceEEEEEech-hhCeEEEEEEEcc
Confidence 222 456889999999999999986 53 7899999877422 3445799999999 9999999999999
Q ss_pred Ccce-EEEEEEEEEe
Q psy2775 638 LGSA-THGARVTVDV 651 (785)
Q Consensus 638 ~g~~-~~~~~l~V~~ 651 (785)
.|.. ..+..+.|.|
T Consensus 246 ~G~~~~~s~~~~l~V 260 (262)
T 3rjd_A 246 DGNVLKRSPELELQV 260 (262)
T ss_dssp TSSCEEECCCEEECE
T ss_pred cCceEEecCCeEEEE
Confidence 9975 4445555543
No 75
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.96 E-value=2e-28 Score=248.83 Aligned_cols=266 Identities=14% Similarity=0.138 Sum_probs=185.6
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAK 92 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 92 (785)
|.|...+..+.+.+|++++|.|.+.|. |.|++++..+. .+.... .. ..+.++|.|.+++.+|+|.|+|.|.
T Consensus 1 P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~~~--~~~~~~-~~--~~~~~~L~i~~~~~~D~G~Y~C~a~ 71 (289)
T 3mjg_X 1 LVVTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQEPP--QEMAKA-QD--GTFSSVLTLTNLTGLDTGEYFCTHN 71 (289)
T ss_dssp CCBCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBCCS--EEEEEC-TT--SCEEEEEEECSCCGGGCEEEEEECC
T ss_pred CeecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCCcc--cceecc-CC--CceeEEEEEccCChhhCEEEEEEEc
Confidence 677778888999999999999999764 99999998763 122221 11 1234679999999999999999999
Q ss_pred cCCee-EEEEeeEEEeCCCCCCCceecCCC--ceEeccCCcEEEEEEEeccCCCeEEEeECC--EEcccceEEEeCCEEE
Q psy2775 93 NREGE-AKMDIPVKVNTGKPEKPSILEPLH--DVSITEGESAVLSVQVGGEPSPKVEWYKDG--KLIKDRQITSEKNTHT 167 (785)
Q Consensus 93 ~~~~~-~~~~~~v~v~~~~~~~p~i~~~~~--~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g--~~~~~~~~~~~~~~~~ 167 (785)
|..|. ......+.|.+..+..|.+..... ...+.+|+.+.|.|.+. .|.+.++|++++ ..+... ......
T Consensus 72 n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~---~~~~~~- 146 (289)
T 3mjg_X 72 DSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVP---YDHQRG- 146 (289)
T ss_dssp C------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCC---EETTTE-
T ss_pred ccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCcccee---ecCCcC-
Confidence 98875 223344455443333343332222 26788999999999998 677889999864 333211 111111
Q ss_pred EEEcccCCCCcEEEEEEEEcCCeeEEEE-EEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcce
Q psy2775 168 LTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVS 246 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 246 (785)
+. ...|+|.|+|.|.|..+..... ..|.|... .+|.+...+....
T Consensus 147 ~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~------------------------------~~p~i~~~~~~~~ 192 (289)
T 3mjg_X 147 FS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV------------------------------SSINVSVNAVQTV 192 (289)
T ss_dssp EE----ECCCSSEEEEEEEETTEEEECCCEEEEECCC------------------------------CCCCCEEEESCSE
T ss_pred ee----eeccCcEEEEEEEeCCceeeeeeEEEEecCC------------------------------CCCCcEEeCCcce
Confidence 11 3679999999999877655443 55665421 2344555555567
Q ss_pred eCCCCeEEEEEEEccCCCCeEEEEECCEEccc----ceEEE----eCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEE
Q psy2775 247 ITEGESAVLSVQVGGEPSPKVEWYKDGKLIKD----RQITS----EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAA 318 (785)
Q Consensus 247 ~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~----~~~~~----~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 318 (785)
+.+|+.+.|.|.+.|+|.+.+.|++++..... ..... ......|.|.++..+|+|.|+|.|.|..|....++
T Consensus 193 v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~ 272 (289)
T 3mjg_X 193 VRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEK 272 (289)
T ss_dssp EETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEE
T ss_pred eEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEE
Confidence 88999999999999999999999987654331 11111 12356899999999999999999999999999999
Q ss_pred EEEEeccc
Q psy2775 319 NLNVDQGK 326 (785)
Q Consensus 319 ~l~v~~~~ 326 (785)
.|+|...+
T Consensus 273 ~l~v~~~~ 280 (289)
T 3mjg_X 273 AINITVVE 280 (289)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 99998643
No 76
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=3.2e-29 Score=255.15 Aligned_cols=270 Identities=17% Similarity=0.169 Sum_probs=200.0
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|...+..+.+.+|++++|.|.+.+. +.|++++.. ...+.... ..++|.|.+++.+|+|.|+|
T Consensus 2 ~~~P~i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-----~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C 68 (292)
T 4dkd_C 2 GSIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGPPSP-----HWTLYSDG----SSSILSTNNATFQNTGTYRC 68 (292)
T ss_dssp --CCEEESCCSSCEECTTCCEEEEEECSSC----CCBCCCCCS-----SCEECCBT----TEEEEEESSCCGGGCSCEEE
T ss_pred CCCceecCCCCeEEEcCCCcEEEEEcCCCc----eEEccCCCC-----ceEEeccC----ceEEEEEcccccccCEEEEE
Confidence 478999999999999999999999998773 999965431 22222222 13579999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCc-eecCCCceEeccCCcEEEEEEEeccCC--CeEEEeEC-CEEcccceEEEeCCE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPS-ILEPLHDVSITEGESAVLSVQVGGEPS--PKVEWYKD-GKLIKDRQITSEKNT 165 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~-i~~~~~~~~~~~G~~v~l~C~~~g~p~--~~v~W~~~-g~~~~~~~~~~~~~~ 165 (785)
.+.|..+.....+.|.|.. +|. +...+....+.+|+.+.|.|.+.+ |. +.+.|+++ +..+...........
T Consensus 69 ~~~n~~~~~~~~~~l~V~~----~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~ 143 (292)
T 4dkd_C 69 TEPGDPLGGSAAIHLYVKD----PARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPW 143 (292)
T ss_dssp CCCC----CCEEECCEECC----SSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSS
T ss_pred EEccCCCCcceEEEEEEcC----ccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCC
Confidence 9999887777777788763 332 344556788999999999999987 44 78999997 555544432222223
Q ss_pred EEEEEcccCCCCcEEEEEEEEcCCeeEEE-EEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCc
Q psy2775 166 HTLTLIQCSTKDKGRYSVKVTNKEGTVES-AANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHD 244 (785)
Q Consensus 166 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 244 (785)
..|.|.++..+|+|.|+|.|.|..+.... .+.|.|.... +.+|.+...+..
T Consensus 144 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~----------------------------~~~p~i~~~~~~ 195 (292)
T 4dkd_C 144 HGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVI----------------------------PGPPALTLVPAE 195 (292)
T ss_dssp SCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCC----------------------------CSSCEEEEESSC
T ss_pred ceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCC----------------------------CCCCeEEccCCc
Confidence 34999999999999999999988775544 6778887422 135777777777
Q ss_pred ceeCCCCeEEEEEEEccCCC-CeEEEEECCEEcc-cceEEEeC----CEEEEEEccCCCCCCeEEEEEEEeCCCceEEEE
Q psy2775 245 VSITEGESAVLSVQVGGEPS-PKVEWYKDGKLIK-DRQITSEK----NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAA 318 (785)
Q Consensus 245 ~~~~~G~~~~l~C~~~g~p~-~~v~W~~~~~~l~-~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~ 318 (785)
..+.+|+.+.|.|.+.+.|+ ..+.|++++..+. ........ ....|.|.++..+|+|.|+|.|.|..|....++
T Consensus 196 ~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 275 (292)
T 4dkd_C 196 LVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSM 275 (292)
T ss_dssp BCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEE
T ss_pred eeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEE
Confidence 77789999999999988665 5788999887665 11111111 235899999999999999999999999999888
Q ss_pred EEEEecc
Q psy2775 319 NLNVDQG 325 (785)
Q Consensus 319 ~l~v~~~ 325 (785)
.|.|...
T Consensus 276 ~l~V~~~ 282 (292)
T 4dkd_C 276 FFRVVES 282 (292)
T ss_dssp EECC---
T ss_pred EEEEeeC
Confidence 8888753
No 77
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.96 E-value=2.3e-30 Score=269.20 Aligned_cols=281 Identities=19% Similarity=0.275 Sum_probs=133.9
Q ss_pred cCCCeEEecCCcEEEEEEEeC--CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecCcceeE
Q psy2775 421 PLQDVKVSRDEKASFEIELTK--GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTGDKESK 498 (785)
Q Consensus 421 ~~~~~~v~~g~~~~l~C~~~~--~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g~~~~~ 498 (785)
.+....+.+|+.+.|.|.+.+ +.+.+.|+++|..+....++.+. ...|.|.+++.+|+|.|+|.|.|.|.....
T Consensus 14 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~ 89 (334)
T 1ry7_B 14 QQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVG----PQRLQVLNASHEDSGAYSCRQRLTQRVLCH 89 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcEEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEec----cceEEEeecccccCEEEEEEEEeCCeEEEE
Confidence 467778899999999999987 35789999999988766655442 247999999999999999999997555666
Q ss_pred EEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeee----eeeeeeeecC
Q psy2775 499 ATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIER----FEEKTVKEKG 574 (785)
Q Consensus 499 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~----~~~~~v~~g~ 574 (785)
+.|.|...+...... ..... .... .....+|.|..+ .....+.+|+
T Consensus 90 ~~l~V~~~~~~~~~~--------~~~~~-------~~~~---------------~~~~~~p~~~~p~~~~~~~~~v~~g~ 139 (334)
T 1ry7_B 90 FSVRVTDAPSSGDDE--------DGEDE-------AEDT---------------GVDTGAPYWTRPERMDKKLLAVPAAN 139 (334)
T ss_dssp -----------------------------------------------------------CCCCSCCTTCCCCEEEEETTC
T ss_pred EEEEEeccCcccccc--------ccccc-------cccc---------------cccCCCCEEeccccccceeEEecCCC
Confidence 777776543210000 00000 0000 000112444332 1246788999
Q ss_pred eEEEEEEEecCCCCceEEEeCCEEecCCCCe-eEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEeec
Q psy2775 575 TIRLMAKVKASPAPSIVWFRNNKPLLSSPKK-REIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVDVEK 653 (785)
Q Consensus 575 ~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~-~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 653 (785)
.++|.|.+.|.|.|.|.|+|++..+....+. .........+|.|.++.. +|+|.|+|.|.|..|....++.|.|....
T Consensus 140 ~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 218 (334)
T 1ry7_B 140 TVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVP-SDRGNYTCVVENKFGSIRQTYTLDVLERS 218 (334)
T ss_dssp CEEEECCCCCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCG-GGCCCEEEEEEETTEEEEEEEEEEEECCC
T ss_pred cEEEEEEccCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCc-ccCEEEEEEEEeCCCCEEEEEEEEEecCC
Confidence 9999999999999999999999988765442 122334556899999999 99999999999999998888888886210
Q ss_pred cCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeEEEEEEEecCCCCceEEeE---
Q psy2775 654 VGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRFKALPPPKAEWTV--- 730 (785)
Q Consensus 654 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~P~p~i~W~~--- 730 (785)
..+|.+....+....+..|+.++|.|.+.|.|.|.|.|++
T Consensus 219 -------------------------------------~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~ 261 (334)
T 1ry7_B 219 -------------------------------------PHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVE 261 (334)
T ss_dssp -------------------------------------CSSCBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCC
T ss_pred -------------------------------------CCCCceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCc
Confidence 1235554434566778999999999999999999999999
Q ss_pred -CCEEeeeccccc--cch--------hhhcccccceeeeeeceEEEEEEecccc
Q psy2775 731 -NGTVIVPSKRVK--GKA--------EFIKKLDDLEVKERENAVLEVEVTSDKA 773 (785)
Q Consensus 731 -~~~~~~~~~~~~--~~~--------~~~~~l~~~~v~~~~~~~~~c~~~~~~~ 773 (785)
||..+..+.+.. +.. .....|.+..+...|+|.|+|.+.+...
T Consensus 262 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G 315 (334)
T 1ry7_B 262 VNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIG 315 (334)
T ss_dssp GGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSC
T ss_pred CCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCC
Confidence 787776554321 111 1123688889999999999999987443
No 78
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.96 E-value=9e-29 Score=254.35 Aligned_cols=260 Identities=19% Similarity=0.267 Sum_probs=181.4
Q ss_pred eccceeEeeCccEEEEEEEcCCC-C-----eEEEEECCEEc-------------CCCCcEEEEEc-----CcEEEEEEcC
Q psy2775 332 KLDDLEVKERENAVLEVEVTSDK-A-----DVKWFKDGQEI-------------KTSKKVTIEKK-----GTIRKLLIRN 387 (785)
Q Consensus 332 ~~~~~~~~~g~~~~l~C~~~~~~-~-----~v~W~~~~~~l-------------~~~~~~~~~~~-----~~~~~l~i~~ 387 (785)
.+....+..|++++|.|.+.+++ + .++|+|++... ....++..... ....+|.|.+
T Consensus 6 ~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 85 (313)
T 4fqp_A 6 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFG 85 (313)
T ss_dssp CCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECS
T ss_pred CCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECc
Confidence 34566778899999999998743 2 48999987532 11222222111 0123499999
Q ss_pred CCCCCceEEEEEEec-cceEE--EEEE-EecCCcccccCCCeEEecCCcEEEEEEEeC--CCceEEEEECCEEcccCCCE
Q psy2775 388 ISVHDEGEYTCSLPD-QETSA--ELNV-VELPPEISVPLQDVKVSRDEKASFEIELTK--GDALVKWYKDGKEIAFSENV 461 (785)
Q Consensus 388 ~~~~d~G~Y~C~a~n-~~~~~--~~~v-~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~--~~~~i~W~~~~~~~~~~~~~ 461 (785)
+..+|+|.|+|.+.+ ..+.. .+.+ +..+|.+........+..|+.+.+.|.+.+ |.+.+.|++++..+......
T Consensus 86 v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~ 165 (313)
T 4fqp_A 86 LRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQV 165 (313)
T ss_dssp CCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEE
T ss_pred CChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCcccccccee
Confidence 999999999998854 33322 2222 223445555555556678889999998764 67889999998876543322
Q ss_pred EEEEeCc---EEEEEEccCCCCCcEEEEEEEeec-CcceeE--EEEEEEcCcccccccCCCeeEEeccCceeEEEEecCC
Q psy2775 462 TLSIDGK---KQKLIIFSAGLEDAGEYSCRVGDT-GDKESK--ATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSP 535 (785)
Q Consensus 462 ~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 535 (785)
....++. .+.|.|.+...+|+|.|+|.|.|. +..... +.|.|..+
T Consensus 166 ~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~----------------------------- 216 (313)
T 4fqp_A 166 PGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYP----------------------------- 216 (313)
T ss_dssp ECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEE-----------------------------
T ss_pred eeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccC-----------------------------
Confidence 2222221 356999999999999999999996 444433 44444433
Q ss_pred ceeeEEeecccccccCCCCCCCCCeEe-eeeeeeeeeecCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEeeCCe
Q psy2775 536 DIQVKWLNLFIVPTCPLGSPGQAPLFI-ERFEEKTVKEKGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIFDGEN 613 (785)
Q Consensus 536 ~~~~~W~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~~~~~ 613 (785)
|.+. .......+.+|+.++|.|.+.|+|.| .|+|+|+|.++.... ...+
T Consensus 217 -----------------------P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l~~~~----~~~~-- 267 (313)
T 4fqp_A 217 -----------------------PEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFA----VAQG-- 267 (313)
T ss_dssp -----------------------EEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTE----EEET--
T ss_pred -----------------------CccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEECCCce----EEeC--
Confidence 3322 22234456778999999999999999 699999999886432 2222
Q ss_pred EEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 614 IILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 614 ~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.+|.|.++.. +|+|.|+|.|.|..|+...++.|.|+
T Consensus 268 ~~L~i~~v~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 268 AQLLIRPVDK-PINTTLICNVTNALGARQAELTVQVK 303 (313)
T ss_dssp TEEEECCCSS-CCEEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEECcCCh-hhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 3699999999 99999999999999999888888886
No 79
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.96 E-value=4.6e-29 Score=256.97 Aligned_cols=262 Identities=17% Similarity=0.269 Sum_probs=191.9
Q ss_pred cceeEeeCccEEEEEEEcCC--CCeEEEEECCEEcCC----CCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccceEE
Q psy2775 334 DDLEVKERENAVLEVEVTSD--KADVKWFKDGQEIKT----SKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQETSA 407 (785)
Q Consensus 334 ~~~~~~~g~~~~l~C~~~~~--~~~v~W~~~~~~l~~----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~~~ 407 (785)
....+.+|+.+.|.|.+.+. .+.++|++++..+.. ..++... ++ .|.|.++..+|+|.|+|.|.|..+..
T Consensus 13 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~-~~---~L~i~~v~~~D~G~Y~C~a~n~~g~~ 88 (315)
T 1itb_B 13 IILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH-KE---KLWFVPAKVEDSGHYYCVVRNSSYCL 88 (315)
T ss_dssp CCCEEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC-SS---BEECTTCCGGGCSCCEECCCSSSCCC
T ss_pred eEEEEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc-CC---eEEECCCChhhCEEEEEEEeCCceEE
Confidence 35678999999999999873 579999999865422 2233322 22 39999999999999999999876544
Q ss_pred EE----EEEecCCcccccC---CCeEEecCCcEEEEEEE------eC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEE
Q psy2775 408 EL----NVVELPPEISVPL---QDVKVSRDEKASFEIEL------TK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLI 473 (785)
Q Consensus 408 ~~----~v~~~~~~~~~~~---~~~~v~~g~~~~l~C~~------~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~ 473 (785)
.. .+...+|.+...+ ....+..|+.+.|.|.+ .+ |.+.+.|++++..+..........++ .|.
T Consensus 89 ~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~~~---~L~ 165 (315)
T 1itb_B 89 RIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKD---RLI 165 (315)
T ss_dssp CEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSSEEEETT---EEE
T ss_pred EEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccceEeecCc---eEE
Confidence 33 3344455554332 23567899999999998 55 67789999999998654332222233 799
Q ss_pred EccCCCCCcEEEEEEEe-ec-Ccc---eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccccc
Q psy2775 474 IFSAGLEDAGEYSCRVG-DT-GDK---ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVP 548 (785)
Q Consensus 474 i~~~~~~d~G~Y~C~a~-n~-g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 548 (785)
|.+++.+|+|.|+|.|. |. |.. .....+.+..+.
T Consensus 166 i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~----------------------------------------- 204 (315)
T 1itb_B 166 VMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN----------------------------------------- 204 (315)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCC-----------------------------------------
T ss_pred EEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCC-----------------------------------------
Confidence 99999999999999999 65 544 223333333221
Q ss_pred ccCCCCCCCCCeEeeeeee-eeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeE-----Eee-------CCeEE
Q psy2775 549 TCPLGSPGQAPLFIERFEE-KTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKRE-----IFD-------GENII 615 (785)
Q Consensus 549 ~~~~~~~~~~p~~~~~~~~-~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~-----~~~-------~~~~~ 615 (785)
...+|.|...+.. ..+.+|+.++|.|.+.|.|.|.+.|+++|..+..+..... ... ...+.
T Consensus 205 ------~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (315)
T 1itb_B 205 ------KPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITV 278 (315)
T ss_dssp ------CCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEE
T ss_pred ------CCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEE
Confidence 0112666555443 5789999999999999999999999999999977653211 111 12458
Q ss_pred EEEccCCCCCC-ceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 616 LELKEADSETD-AGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 616 L~i~~~~~~~d-~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
|.|.++.. +| +|.|+|.|.|..|....++.|.|.
T Consensus 279 L~i~~v~~-~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 279 LNISEIES-RFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp EEESSCCG-GGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred EEEeecCH-HHcCCceEEEEecCCCceeEEEEEEec
Confidence 99999999 99 999999999999999999888875
No 80
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.96 E-value=1.1e-27 Score=245.39 Aligned_cols=272 Identities=22% Similarity=0.358 Sum_probs=199.7
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCC-CCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQET-DEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
..||.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+... .++.+....+. .++|+|.+++.+|+|.|+
T Consensus 2 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~ 78 (305)
T 2nzi_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG---YHQLIIASVTDDDATVYQ 78 (305)
T ss_dssp CCCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTT---EEEEEESSCCGGGCSEEE
T ss_pred CCCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCC---EEEEEEccCChhhCeEEE
Confidence 46899999999999999999999999999999999999999988654 34444332221 246999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEeCCCCCCCce-----ecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEE
Q psy2775 89 VVAKNREGEAKMDIPVKVNTGKPEKPSI-----LEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QIT 160 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~~~~~~p~i-----~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~ 160 (785)
|.|.|..|.....+.|.|.. +|.+ ...+....+..|+.+.|.|.+.|.|.+.+.|++++..+... .+.
T Consensus 79 C~a~n~~g~~~~~~~l~V~~----~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~ 154 (305)
T 2nzi_A 79 VRATNQGGSVSGTASLEVEV----PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVI 154 (305)
T ss_dssp EEEEETTEEEEEEEEEEECE----EEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEE
T ss_pred EEEEcCCCCccceEEEEEec----CCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEE
Confidence 99999999888888888863 3333 22335677889999999999999999999999999887643 233
Q ss_pred EeCCEEEEEEcc-cCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeee
Q psy2775 161 SEKNTHTLTLIQ-CSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSIL 239 (785)
Q Consensus 161 ~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 239 (785)
......+|.|.+ +..+|.|.|+|.|.|..|.....+.|.|...+. ++....+.......+.+.|..|
T Consensus 155 ~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~------~p~~~~~~~~~~~~v~l~w~~p------ 222 (305)
T 2nzi_A 155 VTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPD------PPRGVKVSDVSRDSVNLTWTEP------ 222 (305)
T ss_dssp ECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCC------CCEEEEEESCCSSCEEEEEECC------
T ss_pred EcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCC------CCCCceeeeccCCEEEEEEcCC------
Confidence 445667899999 999999999999999999999899999875431 0000000000111111111110
Q ss_pred ecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEE
Q psy2775 240 EPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA 317 (785)
Q Consensus 240 ~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~ 317 (785)
...|....+.|.+...+.+...|.+.+... ...|.|.++...+.|.|+|.|.|..|....+
T Consensus 223 -------~~~g~~~i~~y~v~~~~~~~~~w~~~~~~~----------~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S 283 (305)
T 2nzi_A 223 -------ASDGGSKITNYIVEKCATTAERWLRVGQAR----------ETRYTVINLFGKTSYQFRVIAENKFGLSKPS 283 (305)
T ss_dssp -------SCCSBSCEEEEEEEEEETTSCCEEEEEEES----------SSEEEECSCCSSCEEEEEEEEEETTEECCCC
T ss_pred -------ccCCCCceeEEEEEEecCCCCccEECcccc----------CceEEecCCCCCCeEEEEEEEEeCCcccCCc
Confidence 123444556666665566666676644321 3479999999999999999999998866544
No 81
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.96 E-value=2.6e-28 Score=244.12 Aligned_cols=246 Identities=18% Similarity=0.230 Sum_probs=183.2
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEe-cCCC--eeEEEECCEEccCCCCEEEeecCCccceEEEEEEccc---CCCCC
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVA-VPEP--DLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSI---KKREE 84 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~---~~~D~ 84 (785)
.+|.+.. +..+.+|++++|.|.+.| .|.+ .|.|++++..+.. .+...++ .|.+..+ +.+|+
T Consensus 5 ~~p~~~~---~~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~------~~~~~~~~~~~~~d~ 71 (265)
T 2oz4_A 5 TPPQLVS---PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGND------SFSAKASVSVTAEDE 71 (265)
T ss_dssp SCCEEEC---CSEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSS------EEEEEEEEEECGGGC
T ss_pred CCCcccc---CceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCC------eEEEEeecccccccC
Confidence 3455543 347899999999999998 6766 9999999998765 2222222 1444443 77787
Q ss_pred eE--EEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEe
Q psy2775 85 GV--YTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSE 162 (785)
Q Consensus 85 G~--Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~ 162 (785)
|. |+|.|.|..+.....+.|.|... .+|.+.. ....+.+|+.+.|.|.+. |.+.++| +|..+.. .
T Consensus 72 g~g~Y~C~a~n~~~~~~~~~~l~V~~~--p~p~~~~--~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~-----~ 138 (265)
T 2oz4_A 72 GTQRLTCAVILGNQSQETLQTVTIYSF--PAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQP-----L 138 (265)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEECC--CCCEEEE--SCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSC-----C
T ss_pred CcceEEEEEecCCCCcEEEEEEEEeCC--CCceeec--CCceecCCCcEEEEEEcc--CCCEEEE--CCEEccC-----C
Confidence 74 99999999998888888888742 2355543 355678899999999997 8899999 8877732 2
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCC-eeEE---EEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCee
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKE-GTVE---SAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSI 238 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~-g~~~---~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 238 (785)
+....|.|..+..+|+|.|+|.|.|.. |... ..+.|.|... |.+
T Consensus 139 ~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~--------------------------------p~~ 186 (265)
T 2oz4_A 139 GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYG--------------------------------PRL 186 (265)
T ss_dssp SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEE--------------------------------EEC
T ss_pred CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeC--------------------------------Ccc
Confidence 345678999999999999999998544 5544 5577777633 222
Q ss_pred ee--cCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEE
Q psy2775 239 LE--PLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVES 316 (785)
Q Consensus 239 ~~--~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~ 316 (785)
.. .+....+.+|+.+.|.|.+.|+|.+.+.|++++..+. ..+ .+ ..+..+|+|.|+|.|.|..|....
T Consensus 187 ~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~------~~g--~~--~~v~~~d~G~Y~C~a~N~~G~~~~ 256 (265)
T 2oz4_A 187 DERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL------PIG--ES--VTVTRDLEGTYLCRARSTQGEVTR 256 (265)
T ss_dssp CGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEEC------CTT--SC--EECCGGGCEEEEEEEEETTEEEEE
T ss_pred ccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccC------CCC--cE--EEeehhhCeEEEEEEECCCCcEEE
Confidence 22 2335577899999999999999999999999987221 111 12 237789999999999999999998
Q ss_pred EEEEEEec
Q psy2775 317 AANLNVDQ 324 (785)
Q Consensus 317 ~~~l~v~~ 324 (785)
.+.|.|.+
T Consensus 257 ~~~l~V~~ 264 (265)
T 2oz4_A 257 EVTVNVLS 264 (265)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 89998874
No 82
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.96 E-value=2.1e-28 Score=251.95 Aligned_cols=259 Identities=14% Similarity=0.115 Sum_probs=181.0
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
...+|.|...|. ..|.+|++++|.|.+.+. .+.+.|+|++..+..... .... ...|.|.+++.+|+|.|+
T Consensus 21 ~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~----~~~~----~~~L~I~~v~~~D~G~Y~ 90 (316)
T 3vh8_G 21 GQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIFH----GRIF----QESFNMSPVTTAHAGNYT 90 (316)
T ss_dssp ---CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHHH----HCCB----SSCEEECSCCGGGCEEEE
T ss_pred CCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceeec----CCcc----eEEEEECCCCcccCeEEE
Confidence 456899998888 678899999999999876 678999999976543110 0000 134999999999999999
Q ss_pred EEEEcCC-----eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEE---
Q psy2775 89 VVAKNRE-----GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQIT--- 160 (785)
Q Consensus 89 C~a~~~~-----~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~--- 160 (785)
|.|.+.. +..+..+.|.|.. .+.+|.+...+... +.+|+.++|.|.+. .+++.+.|+++|..+......
T Consensus 91 C~a~~~~~~~~~~~~s~~~~l~V~~-~~~~p~~~~~~~~~-v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~ 167 (316)
T 3vh8_G 91 CRGSHPHSPTGWSAPSNPVVIMVTG-NHRKPSLLAHPGPL-VKSGERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQI 167 (316)
T ss_dssp EEEBCSSSSSSBCCCCCCEEEEEEC-SSCCCEEEEESCSE-EETTCCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEE
T ss_pred EEEEcCCCCcceecCCCcEEEEEec-CCCCCeEEecCCCc-cCCCCeEEEEEcCC-CCCcEEEEEECCCccccceeeeee
Confidence 9998632 2233445666653 23456666554444 88999999999995 456799999999877543211
Q ss_pred -EeCCEEEEEEcccCCCCcEEEEEEEEcCCeeE-----EEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCC
Q psy2775 161 -SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV-----ESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPE 234 (785)
Q Consensus 161 -~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (785)
.......|.|.+++.+|+|.|+|.|.|..|.. +....|.|.... .
T Consensus 168 ~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~-----------------------------~ 218 (316)
T 3vh8_G 168 HDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPY-----------------------------E 218 (316)
T ss_dssp ETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSS-----------------------------C
T ss_pred cCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCC-----------------------------C
Confidence 12245689999999999999999999987631 344566665432 3
Q ss_pred CCeeeecCCcceeCCCCeEEEEEEEccCCCCeEEEEECCEEcccceE--EE--eCCEEEEEEccCCCCCCeEEEEEEEeC
Q psy2775 235 KPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQI--TS--EKNTHTLTLIQCSTKDKGRYSVKVTNK 310 (785)
Q Consensus 235 ~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~~--~~--~~~~~~l~i~~~~~~d~G~Y~C~~~n~ 310 (785)
+|.+...+. ..+.+|+.++|.|.+. .|.+.+.|+++|..+..... .. ......|.|.+++ |+|.|+|.+.|.
T Consensus 219 ~p~i~~~~~-~~v~~G~~v~L~C~~~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~ 294 (316)
T 3vh8_G 219 KPSLSAQPG-PKVQAGESVTLSCSSR-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFR 294 (316)
T ss_dssp CCEEEEESC-SCCCTTSCCEEEEEES-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBT
T ss_pred CCeEEeCCC-CeecCCCcEEEEEECC-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecC
Confidence 455655543 3678999999999997 57789999999987652211 11 1123689999999 999999999997
Q ss_pred CCc
Q psy2775 311 EGT 313 (785)
Q Consensus 311 ~g~ 313 (785)
.+.
T Consensus 295 ~~~ 297 (316)
T 3vh8_G 295 HSP 297 (316)
T ss_dssp TBT
T ss_pred CCc
Confidence 654
No 83
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.96 E-value=8.9e-27 Score=255.40 Aligned_cols=356 Identities=16% Similarity=0.207 Sum_probs=216.4
Q ss_pred CCcceeCCCCeEEEEEEEccCCC----CeEEEEEC--CEEcc-----------------cceEEEe----CCEEEEEEcc
Q psy2775 242 LHDVSITEGESAVLSVQVGGEPS----PKVEWYKD--GKLIK-----------------DRQITSE----KNTHTLTLIQ 294 (785)
Q Consensus 242 ~~~~~~~~G~~~~l~C~~~g~p~----~~v~W~~~--~~~l~-----------------~~~~~~~----~~~~~l~i~~ 294 (785)
+....+.+|+.++|.|.+.+.+. ..+.|||. |..+. ..++... .+..+|.|.+
T Consensus 7 p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 86 (512)
T 1zvo_C 7 SGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRS 86 (512)
T ss_pred CCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECc
Confidence 34667889999999999987543 67999985 22110 0112111 2357899999
Q ss_pred CCCCCCeEEEEEEEeCCC-----------c--eEEEEEEEEecc---cccee-eeccceeEeeCccEEEEEEEcC--CC-
Q psy2775 295 CSTKDKGRYSVKVTNKEG-----------T--VESAANLNVDQG---KAEFI-KKLDDLEVKERENAVLEVEVTS--DK- 354 (785)
Q Consensus 295 ~~~~d~G~Y~C~~~n~~g-----------~--~~~~~~l~v~~~---~~~~~-~~~~~~~~~~g~~~~l~C~~~~--~~- 354 (785)
++.+|+|.|.|.+.+..+ . ....+.|.|... +|.+. ..+.......++.++|.|.+.+ |.
T Consensus 87 v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p 166 (512)
T 1zvo_C 87 MSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTS 166 (512)
T ss_pred CCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCc
Confidence 999999999999998642 1 113356777632 22222 1111110224689999999987 33
Q ss_pred CeEEEEECCEEcCCC-CcEEEEEcCc---EEEEEEcCCCCCCceEEEEEEeccceEEEEEE--------------EecCC
Q psy2775 355 ADVKWFKDGQEIKTS-KKVTIEKKGT---IRKLLIRNISVHDEGEYTCSLPDQETSAELNV--------------VELPP 416 (785)
Q Consensus 355 ~~v~W~~~~~~l~~~-~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~~v--------------~~~~~ 416 (785)
+.++|++++...... .......++. .+.|.|.....+ .|.|+|.|.|..+...... +..||
T Consensus 167 ~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp 245 (512)
T 1zvo_C 167 VTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQP 245 (512)
T ss_pred eEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCC
Confidence 389999865432100 0111111222 245888888777 8999999998655432221 11121
Q ss_pred ----------------------------------------------------cc-cccCCCeEEecCCcEEEEEEEeCCC
Q psy2775 417 ----------------------------------------------------EI-SVPLQDVKVSRDEKASFEIELTKGD 443 (785)
Q Consensus 417 ----------------------------------------------------~~-~~~~~~~~v~~g~~~~l~C~~~~~~ 443 (785)
.+ ..++....+.+|+.++|.|.+.+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~ 325 (512)
T 1zvo_C 246 QAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSD 325 (512)
T ss_pred chhccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceE
Confidence 11 1122333356799999999999842
Q ss_pred ---ceEEEEECCEEcccCCC---EEEEEeCc---EEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEE-cCcccccc
Q psy2775 444 ---ALVKWYKDGKEIAFSEN---VTLSIDGK---KQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVE-APAVEFLT 512 (785)
Q Consensus 444 ---~~i~W~~~~~~~~~~~~---~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~-~~~~~~~~ 512 (785)
..|+|+++|..+..... .....++. .+.|.|.....+|.|.|+|.|.|. +... ...+... +.. ..
T Consensus 326 P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~---~~ 401 (512)
T 1zvo_C 326 LKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQ---AP 401 (512)
T ss_pred CCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCC---CC
Confidence 37999999988652111 11111221 357999999999999999999997 4332 2222211 100 00
Q ss_pred cCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEE-EEEEEecCCCC--c
Q psy2775 513 KLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIR-LMAKVKASPAP--S 589 (785)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~-l~C~~~g~P~p--~ 589 (785)
. +|.+....... +|+.++ |.|.+.|++++ .
T Consensus 402 ~--------------------------------------------~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~ 434 (512)
T 1zvo_C 402 V--------------------------------------------KLSLNLLASSD---PPEAASWLLCEVSGFSPPNIL 434 (512)
T ss_pred C--------------------------------------------CCEEEEEccCc---CCCCceEEEEEEeeeCCCCcE
Confidence 0 12222211111 789999 99999996443 6
Q ss_pred eEEEeCCEEecCCCCe--eEEe-eCCe-----EEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 590 IVWFRNNKPLLSSPKK--REIF-DGEN-----IILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 590 v~W~~~~~~i~~~~~~--~~~~-~~~~-----~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
|.|+|||.++..+... .... .++. +.|.|..... +|.|.|+|.|.|............|.
T Consensus 435 v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~-~~~g~YtC~v~h~~l~~~~~~~~~~~ 502 (512)
T 1zvo_C 435 LMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPS-PQPATYTCVVSHEDSRTLLNASRSLE 502 (512)
T ss_pred EEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhc-CCCCeEEEEEEecCCCCceEEEEEEE
Confidence 8999999998654211 1122 2222 3577777666 78999999999998765554554444
No 84
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.96 E-value=5.2e-28 Score=250.35 Aligned_cols=263 Identities=17% Similarity=0.249 Sum_probs=170.3
Q ss_pred ceeeeccceeEeeCccEEEEEEEcC--CCCeEEEEECCEEcC---------CCCcEEEEEc-----CcEEEEEEcCCCCC
Q psy2775 328 EFIKKLDDLEVKERENAVLEVEVTS--DKADVKWFKDGQEIK---------TSKKVTIEKK-----GTIRKLLIRNISVH 391 (785)
Q Consensus 328 ~~~~~~~~~~~~~g~~~~l~C~~~~--~~~~v~W~~~~~~l~---------~~~~~~~~~~-----~~~~~l~i~~~~~~ 391 (785)
.+...+....+.+|+.+.|.|.+.+ |.+.++|++++.... ...++....+ .....|.|.++..+
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPA 84 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGG
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccc
Confidence 3445566788999999999999987 457999999875421 0113332211 22345999999999
Q ss_pred CceEEEEEEeccce---------EEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeC-CCc--eEEEEECCEEcccCC
Q psy2775 392 DEGEYTCSLPDQET---------SAELNVVELPPEISVPLQDVKVSRDEKASFEIELTK-GDA--LVKWYKDGKEIAFSE 459 (785)
Q Consensus 392 d~G~Y~C~a~n~~~---------~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~--~i~W~~~~~~~~~~~ 459 (785)
|+|.|+|.|.|..+ ...+.|...|...........+.+|+.+.|.|.+.+ +++ .+.|+++|..+....
T Consensus 85 D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~ 164 (327)
T 2wng_A 85 DAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQ 164 (327)
T ss_dssp GCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEE
T ss_pred cCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccc
Confidence 99999999988532 245666554432222222356789999999999998 433 899999999886443
Q ss_pred CEEEEE-e-C---cEEEEEEccCCCCCcEEEEEEEeec-Ccc---eeEEEEEEEcCcccccccCCCeeEEeccCceeEEE
Q psy2775 460 NVTLSI-D-G---KKQKLIIFSAGLEDAGEYSCRVGDT-GDK---ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQV 530 (785)
Q Consensus 460 ~~~~~~-~-~---~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (785)
...... . + ..+.|.|.....+|.|.|+|.|.|. +.. ..+..+.+...
T Consensus 165 ~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~------------------------ 220 (327)
T 2wng_A 165 TNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIR------------------------ 220 (327)
T ss_dssp EEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBC------------------------
T ss_pred cccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccC------------------------
Confidence 211110 1 1 1346888888888899999999997 432 12222211110
Q ss_pred EecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEE
Q psy2775 531 ELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREI 608 (785)
Q Consensus 531 ~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~ 608 (785)
.+|.+...... +.+|+.++|.|.+.|. |++ .|+|+|||..+..+......
T Consensus 221 --------------------------~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~ 272 (327)
T 2wng_A 221 --------------------------VPPTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSRTETASTVT 272 (327)
T ss_dssp --------------------------BCCEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEEEEECCSCE
T ss_pred --------------------------CCCEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEccCcccCceE
Confidence 11444433333 7899999999999996 444 89999999998654322222
Q ss_pred eeC-Ce----EEEEEccCCCCCCceeEEEEEEcCCcceEE
Q psy2775 609 FDG-EN----IILELKEADSETDAGDYKVVATNELGSATH 643 (785)
Q Consensus 609 ~~~-~~----~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 643 (785)
..+ +. ..|.|..+.. +|+|.|+|.|.|..|....
T Consensus 273 ~~~~g~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~~~~~s 311 (327)
T 2wng_A 273 ENKDGTYNWMSWLLVNVSAH-RDDVKLTCQVEHDGQPAVS 311 (327)
T ss_dssp ECTTSCEEEEEEEEC--------CCEEEEEEEETTCCCEE
T ss_pred ECCCCcEEEEEEEEEccccc-cCCCEEEEEEEeCCCCCch
Confidence 222 22 4689999988 9999999999999987644
No 85
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.96 E-value=2e-28 Score=256.13 Aligned_cols=264 Identities=18% Similarity=0.246 Sum_probs=160.6
Q ss_pred ccceeEeeCccEEEEEEEcC-C-----------CCeEEEEECCE------EcC---CCCcEEEEEcCcEEEEEEcCCCCC
Q psy2775 333 LDDLEVKERENAVLEVEVTS-D-----------KADVKWFKDGQ------EIK---TSKKVTIEKKGTIRKLLIRNISVH 391 (785)
Q Consensus 333 ~~~~~~~~g~~~~l~C~~~~-~-----------~~~v~W~~~~~------~l~---~~~~~~~~~~~~~~~l~i~~~~~~ 391 (785)
.....+.+|+.+.|.|.+.+ | .+.++|++++. .+. ...++. ..++ .|.|.++..+
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~-~~~~---~L~i~~~~~~ 89 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS-KEKD---VLWFRPTLLN 89 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEE-EETT---EEEESSCCGG
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEe-ecCC---EEEEccCChh
Confidence 45677899999999999886 2 38999999873 221 111222 2233 3999999999
Q ss_pred CceEEEEEEeccceEEE----EEEEecCCcccc---cCCCeEEecCCcEEEEEEE-----eC-CCceEEEEECCEEcccC
Q psy2775 392 DEGEYTCSLPDQETSAE----LNVVELPPEISV---PLQDVKVSRDEKASFEIEL-----TK-GDALVKWYKDGKEIAFS 458 (785)
Q Consensus 392 d~G~Y~C~a~n~~~~~~----~~v~~~~~~~~~---~~~~~~v~~g~~~~l~C~~-----~~-~~~~i~W~~~~~~~~~~ 458 (785)
|+|.|+|.|.|..+... +.|...+..... .+....+.+|+.+.|.|.+ .+ +.+.+.|+|++..+...
T Consensus 90 D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~ 169 (349)
T 4dep_C 90 DTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNF 169 (349)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSC
T ss_pred hCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCc
Confidence 99999999998655443 555553322221 1234567899999999984 44 67889999999988554
Q ss_pred CCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-Ccc----eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEec
Q psy2775 459 ENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDK----ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELS 533 (785)
Q Consensus 459 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (785)
.. +..++ ..|.|.+++.+|+|.|+|.|.|. ++. .....|.|..++..
T Consensus 170 ~~--~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~------------------------ 221 (349)
T 4dep_C 170 NN--VIPEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKN------------------------ 221 (349)
T ss_dssp SS--EEEET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGG------------------------
T ss_pred cc--eeecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCC------------------------
Confidence 33 33333 47999999999999999999996 333 35566666654210
Q ss_pred CCceeeEEeecccccccCCCCCCCCCeEeeeeeee--eeeecCeEEEEEEEe----cCCCCceEEEeCCEEecC-CCCee
Q psy2775 534 SPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEK--TVKEKGTIRLMAKVK----ASPAPSIVWFRNNKPLLS-SPKKR 606 (785)
Q Consensus 534 ~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~--~v~~g~~v~l~C~~~----g~P~p~v~W~~~~~~i~~-~~~~~ 606 (785)
..+|.+....... .+.+|+.++|.|.+. |.|.|.|.|+++|..+.. ..+..
T Consensus 222 ----------------------~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~ 279 (349)
T 4dep_C 222 ----------------------AVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVT 279 (349)
T ss_dssp ----------------------CCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CC
T ss_pred ----------------------CCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCccc
Confidence 0124554444332 788999999999999 679999999999998865 22221
Q ss_pred EEe-------eC--CeEEEEEccCCCCCCc-eeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 607 EIF-------DG--ENIILELKEADSETDA-GDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 607 ~~~-------~~--~~~~L~i~~~~~~~d~-G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
+.. .+ ...+|.|.++.. +|+ |.|+|.|.|..|....++.|.|.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 280 INESISHSRTEDETRTQILSIKKVTS-EDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp CCEEEECCTTCCEEEEECC--------------CEEEEECSSCEEEEECC-----
T ss_pred cccceeeecCCCcEEEEEEEEeeccH-HHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 110 11 234599999999 999 999999999999999998888863
No 86
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.96 E-value=3e-28 Score=247.94 Aligned_cols=266 Identities=19% Similarity=0.189 Sum_probs=195.5
Q ss_pred ccceeeeccceeEeeCccEEEEEEEcCCCCeEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccc-
Q psy2775 326 KAEFIKKLDDLEVKERENAVLEVEVTSDKADVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQE- 404 (785)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~- 404 (785)
+|.+...+....+.+|+.++|.|.+.+. ++|++++.. .......+..+.|.|.++..+|+|.|+|.+.|..
T Consensus 4 ~P~i~~~~~~~~v~~G~~v~L~C~~~~~---v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~ 75 (292)
T 4dkd_C 4 IPVIEPSVPELVVKPGATVTLRCVGNGS---VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPL 75 (292)
T ss_dssp CCEEESCCSSCEECTTCCEEEEEECSSC---CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCCC---
T ss_pred CceecCCCCeEEEcCCCcEEEEEcCCCc---eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEccCCC
Confidence 4556666677789999999999998874 999965432 2233344455679999999999999999998853
Q ss_pred ---eEEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeCCC--ceEEEEEC-CEEcccCCCEEEEEeCcEEEEEEccCC
Q psy2775 405 ---TSAELNVVELPPEISVPLQDVKVSRDEKASFEIELTKGD--ALVKWYKD-GKEIAFSENVTLSIDGKKQKLIIFSAG 478 (785)
Q Consensus 405 ---~~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~--~~i~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~ 478 (785)
....+.|...+..+...+....+.+|+.+.|.|.+.++. +.+.|+++ +..+....++....++ .|.|.++.
T Consensus 76 ~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~~~ 152 (292)
T 4dkd_C 76 GGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAK 152 (292)
T ss_dssp -CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEECCSSS---CCEETTCC
T ss_pred CcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccccCCc---eEEECCCC
Confidence 334445555444445556677889999999999999865 67999997 5555555555444333 39999999
Q ss_pred CCCcEEEEEEEeec-Ccc-eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCC
Q psy2775 479 LEDAGEYSCRVGDT-GDK-ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPG 556 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~-g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 556 (785)
.+|+|.|+|.|.|. +.. +..+.|.|.....
T Consensus 153 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~------------------------------------------------ 184 (292)
T 4dkd_C 153 FIQSQDYQCSALMGGRKVMSISIRLKVQKVIP------------------------------------------------ 184 (292)
T ss_dssp GGGCSEEEEEECSTTSCEECCCEEEEEECCCC------------------------------------------------
T ss_pred HHHCeEEEEEEEeCCCceeEEEEEEEEeCCCC------------------------------------------------
Confidence 99999999999987 433 3367888875210
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEe--eCCeEEEEEccCCCCCCceeEEEE
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIF--DGENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~--~~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
.+|.+...+....+.+|+.++|.|.+.|.|++ .+.|++++..+.......... .....+|.|.++.. +|+|.|+|.
T Consensus 185 ~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~d~G~Y~C~ 263 (292)
T 4dkd_C 185 GPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDF-QHAGNYSCV 263 (292)
T ss_dssp SSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCT-TSCEEEEEE
T ss_pred CCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccCh-hcCeEEEEE
Confidence 02556655666677899999999999998764 789999988765433211111 11335899999999 999999999
Q ss_pred EEcCCcceEEEEEEEEEe
Q psy2775 634 ATNELGSATHGARVTVDV 651 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~~ 651 (785)
|.|..|....++.|.|..
T Consensus 264 a~N~~g~~~~~~~l~V~~ 281 (292)
T 4dkd_C 264 ASNVQGKHSTSMFFRVVE 281 (292)
T ss_dssp EECSSCEEEEEEEECC--
T ss_pred EecCCCCceeEEEEEEee
Confidence 999999999988888873
No 87
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.96 E-value=1.3e-27 Score=242.77 Aligned_cols=254 Identities=17% Similarity=0.202 Sum_probs=175.1
Q ss_pred ccceeEeeCccEEEEEEEcCCCCeEEEEECCEEcCCCCcEEEEEcCc-EEEEEEcCCCCCCceEEEEEEeccceE-----
Q psy2775 333 LDDLEVKERENAVLEVEVTSDKADVKWFKDGQEIKTSKKVTIEKKGT-IRKLLIRNISVHDEGEYTCSLPDQETS----- 406 (785)
Q Consensus 333 ~~~~~~~~g~~~~l~C~~~~~~~~v~W~~~~~~l~~~~~~~~~~~~~-~~~l~i~~~~~~d~G~Y~C~a~n~~~~----- 406 (785)
.....+.+|+.++|.|.+.+. ++|++++..+. .+......+. ...|.|.++..+|+|.|+|.|.|..+.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~---v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~ 81 (289)
T 3mjg_X 7 GPELVLNVSSTFVLTCSGSAP---VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDER 81 (289)
T ss_dssp CSEEECCTTCCEEEEEEESSC---CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCC
T ss_pred CCeEEEeCCCcEEEEEeccce---EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcE
Confidence 345678899999999999876 99999998773 2222222222 357999999999999999999986533
Q ss_pred EEEEEEec-CCccccc-CCC---eEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCC
Q psy2775 407 AELNVVEL-PPEISVP-LQD---VKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLED 481 (785)
Q Consensus 407 ~~~~v~~~-~~~~~~~-~~~---~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 481 (785)
..+.+... |.....+ ... ..+.+|+.+.|.|.+.+|.+.++|++++........ .+.....+ ...|
T Consensus 82 ~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~p~~~v~w~~~~~~~~~~~~----~~~~~~~~-----~~~d 152 (289)
T 3mjg_X 82 KRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTDPQLVVTLHEKKGDVALPVP----YDHQRGFS-----GIFE 152 (289)
T ss_dssp EEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBSCTTSCEEEEESSCCSCCCCC----EETTTEEE-----ECCC
T ss_pred EeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcCCCCceEEEEeCCCCCcccee----ecCCcCee-----eecc
Confidence 34444333 2211111 111 668899999999999987889999987532221111 11111111 3579
Q ss_pred cEEEEEEEeecCcce--eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCC
Q psy2775 482 AGEYSCRVGDTGDKE--SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAP 559 (785)
Q Consensus 482 ~G~Y~C~a~n~g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p 559 (785)
+|.|+|.|.|.+... ....|.|.... +|
T Consensus 153 ~G~Y~C~a~n~~~~~~s~~~~l~v~~~~--------------------------------------------------~p 182 (289)
T 3mjg_X 153 DRSYICKTTIGDREVDSDAYYVYRLQVS--------------------------------------------------SI 182 (289)
T ss_dssp SSEEEEEEEETTEEEECCCEEEEECCCC--------------------------------------------------CC
T ss_pred CcEEEEEEEeCCceeeeeeEEEEecCCC--------------------------------------------------CC
Confidence 999999999863222 23455554421 14
Q ss_pred eEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEe-----eCCeEEEEEccCCCCCCceeEEEEE
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIF-----DGENIILELKEADSETDAGDYKVVA 634 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~-----~~~~~~L~i~~~~~~~d~G~Y~C~a 634 (785)
.+...+....+.+|++++|.|.+.|+|.|.|+|++++............. .....+|.|.++.. +|+|.|+|.|
T Consensus 183 ~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a 261 (289)
T 3mjg_X 183 NVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAEL-EDSGTYTCNV 261 (289)
T ss_dssp CCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCS-SCCEEEEEEE
T ss_pred CcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccCh-hhCcEEEEEe
Confidence 44444445678999999999999999999999998876553322221111 22457899999999 9999999999
Q ss_pred EcCCcceEEEEEEEEEe
Q psy2775 635 TNELGSATHGARVTVDV 651 (785)
Q Consensus 635 ~n~~g~~~~~~~l~V~~ 651 (785)
.|..|....++.|.|..
T Consensus 262 ~N~~G~~~~~~~l~v~~ 278 (289)
T 3mjg_X 262 TESVNDHQDEKAINITV 278 (289)
T ss_dssp EETTTTEEEEEEEEEEE
T ss_pred ecCCCCceeEEEEEEEE
Confidence 99999999999999985
No 88
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.95 E-value=7.2e-29 Score=254.56 Aligned_cols=259 Identities=14% Similarity=0.180 Sum_probs=176.1
Q ss_pred cceeEeeCccEEEEEEEcC--CCCeEEEEECCEEcC---------------C--CCcEEEEE-cCcEEEEEEcCCCCCCc
Q psy2775 334 DDLEVKERENAVLEVEVTS--DKADVKWFKDGQEIK---------------T--SKKVTIEK-KGTIRKLLIRNISVHDE 393 (785)
Q Consensus 334 ~~~~~~~g~~~~l~C~~~~--~~~~v~W~~~~~~l~---------------~--~~~~~~~~-~~~~~~l~i~~~~~~d~ 393 (785)
+...+..|++++|.|.+.+ +.+.++|+|++.... . ..+..... .....+|.|.++..+|+
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 3567889999999999865 345799998643211 0 01222111 11123499999999999
Q ss_pred eEEEEEEecc-ceE----EEEEEEecCCcc-cccCCCeEEecCCcEEEEEEEeC--CCceEEEEECCEEcccCCCEEEE-
Q psy2775 394 GEYTCSLPDQ-ETS----AELNVVELPPEI-SVPLQDVKVSRDEKASFEIELTK--GDALVKWYKDGKEIAFSENVTLS- 464 (785)
Q Consensus 394 G~Y~C~a~n~-~~~----~~~~v~~~~~~~-~~~~~~~~v~~g~~~~l~C~~~~--~~~~i~W~~~~~~~~~~~~~~~~- 464 (785)
|.|+|.|.|. .+. ..+.+...|+.. ...+.......|+.+.|.|.+.+ |.+.++|++++.++.........
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~ 166 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNE 166 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTS
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeee
Confidence 9999999874 222 223333333222 22334444557889999998753 67899999998876432110000
Q ss_pred EeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeE--EEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEE
Q psy2775 465 IDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESK--ATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKW 541 (785)
Q Consensus 465 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 541 (785)
.....+.|.|..+..+|+|.|+|.|.|. +..... +.|.|..+|
T Consensus 167 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P---------------------------------- 212 (308)
T 4fom_A 167 TATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAP---------------------------------- 212 (308)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEE----------------------------------
T ss_pred cccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCC----------------------------------
Confidence 0011357999999999999999999996 554444 444444432
Q ss_pred eecccccccCCCCCCCCCeEe-eeeeeeeeeecCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEeeCCeEEEEEc
Q psy2775 542 LNLFIVPTCPLGSPGQAPLFI-ERFEEKTVKEKGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIFDGENIILELK 619 (785)
Q Consensus 542 ~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~ 619 (785)
.+. .......+.+|+.++|.|.+.|+|+| .|.|+|++..+..+.. ..+...|.|.
T Consensus 213 ------------------~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~~~~~-----~~~~~~l~i~ 269 (308)
T 4fom_A 213 ------------------EVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWPDGLL-----ASDNTLHFVH 269 (308)
T ss_dssp ------------------EECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSCCCSSCB-----CSTTEEECCS
T ss_pred ------------------eeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeECCCcEE-----EcCCeEEEEC
Confidence 222 12224456778999999999999999 6999999988765421 2344567889
Q ss_pred cCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 620 EADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+++. +|+|.|+|.|+|..|....++.|.|.
T Consensus 270 ~v~~-~d~G~Y~C~A~N~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 270 PLTF-NYSGVYICKVTNSLGQRSDQKVIYIS 299 (308)
T ss_dssp CCCS-CCCSEEEEEEEETTEEEEEEEECCEE
T ss_pred CCCh-hhCEEEEEEEEeCCCcEEEEEEEEEE
Confidence 9999 99999999999999999888888887
No 89
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.95 E-value=3.3e-27 Score=236.10 Aligned_cols=234 Identities=16% Similarity=0.161 Sum_probs=171.7
Q ss_pred ceeEeeCccEEEEEEEcC-C-CC--eEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCC---CCCCce--EEEEEEeccce
Q psy2775 335 DLEVKERENAVLEVEVTS-D-KA--DVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNI---SVHDEG--EYTCSLPDQET 405 (785)
Q Consensus 335 ~~~~~~g~~~~l~C~~~~-~-~~--~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~---~~~d~G--~Y~C~a~n~~~ 405 (785)
+..+.+|+.++|.|.+.+ . .+ .++|+++|..+.. .+...+.. |.+..+ ...|.| .|+|.+.|..+
T Consensus 12 ~~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~~--~~~~~~~~~~~~d~g~g~Y~C~a~n~~~ 85 (265)
T 2oz4_A 12 PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP----TVTYGNDS--FSAKASVSVTAEDEGTQRLTCAVILGNQ 85 (265)
T ss_dssp CSEEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCC----EEEECSSE--EEEEEEEEECGGGCEEEEEEEEEEETTE
T ss_pred CceEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCc----eEeeCCCe--EEEEeecccccccCCcceEEEEEecCCC
Confidence 447889999999999987 3 34 9999999998865 23333332 444444 677777 49999998655
Q ss_pred E----EEEEEEecCCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCC
Q psy2775 406 S----AELNVVELPPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLED 481 (785)
Q Consensus 406 ~----~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 481 (785)
. ..+.|...|+ ....+....+.+|+.++|.|.+. +.+.++| +|..+... +....|.|..+..+|
T Consensus 86 ~~~~~~~l~V~~~p~-p~~~~~~~~v~~G~~v~l~C~~~-p~~~i~W--~g~~~~~~--------~~~~~l~i~~~~~~~ 153 (265)
T 2oz4_A 86 SQETLQTVTIYSFPA-PNVILTKPEVSEGTEVTVKCEAH-PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDN 153 (265)
T ss_dssp EEEEEEEEEEECCCC-CEEEESCSEEETTCEEEEEEECC-TTSEEEE--SSCSSSCC--------SSEECCEEECCGGGT
T ss_pred CcEEEEEEEEeCCCC-ceeecCCceecCCCcEEEEEEcc-CCCEEEE--CCEEccCC--------CCcEEEEEccccccC
Confidence 4 3455554443 22223456688999999999998 8899999 88777322 233578999999999
Q ss_pred cEEEEEEEeec--Ccce---eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCC
Q psy2775 482 AGEYSCRVGDT--GDKE---SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPG 556 (785)
Q Consensus 482 ~G~Y~C~a~n~--g~~~---~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 556 (785)
+|.|+|.|.|. |... ..+.|.|..+|......
T Consensus 154 ~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~------------------------------------------- 190 (265)
T 2oz4_A 154 GRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERD------------------------------------------- 190 (265)
T ss_dssp TEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGG-------------------------------------------
T ss_pred CceEEEEEEcCCCCCcccccccEEEEEEeCCcccccc-------------------------------------------
Confidence 99999999863 5544 56778887664211110
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+.+..+.+|+.++|.|.+.|+|.|.+.|+|++..+.... . |. .++. +|+|.|+|.|.|
T Consensus 191 -------~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~~~~~~g---------~--~~--~v~~-~d~G~Y~C~a~N 249 (265)
T 2oz4_A 191 -------CPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG---------E--SV--TVTR-DLEGTYLCRARS 249 (265)
T ss_dssp -------SCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEECCTT---------S--CE--ECCG-GGCEEEEEEEEE
T ss_pred -------CCCccEEcCCCeEEEEeECccCCCCeEEEEECCcccCCCC---------c--EE--Eeeh-hhCeEEEEEEEC
Confidence 1225578899999999999999999999999998332221 1 21 3667 999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
..|....++.|.|+
T Consensus 250 ~~G~~~~~~~l~V~ 263 (265)
T 2oz4_A 250 TQGEVTREVTVNVL 263 (265)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEe
Confidence 99999999998886
No 90
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=255.81 Aligned_cols=270 Identities=18% Similarity=0.165 Sum_probs=197.9
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEe-------C-CCceEEEEECCEEc--ccCCCEEEEEeCcEEEEEEccCCCCCcE
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELT-------K-GDALVKWYKDGKEI--AFSENVTLSIDGKKQKLIIFSAGLEDAG 483 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~-------~-~~~~i~W~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~d~G 483 (785)
..|.+...+....+.+|+.+.|.|.+. + +.+.|.|++++..+ .......+...+. .|.|.+++.+|+|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G 94 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDSG 94 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCCE
T ss_pred hhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccCE
Confidence 346666777888999999999999996 5 67789999999874 3322333333332 7999999999999
Q ss_pred EEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEe
Q psy2775 484 EYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFI 562 (785)
Q Consensus 484 ~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~ 562 (785)
.|+|.|.|. |....++.|.|..++.... +.+
T Consensus 95 ~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~-----------------------------------------------~~~- 126 (339)
T 3o4o_C 95 TYVCTTRNASYCDKMSIELRVFENTDAFL-----------------------------------------------PFI- 126 (339)
T ss_dssp EEECCEEETTEEEEEEEEEEEECSCGGGH-----------------------------------------------HHH-
T ss_pred EEEEEEECCcceEEEEEEEEEEcCCCccc-----------------------------------------------ccc-
Confidence 999999997 7777788888887642110 000
Q ss_pred eeeeeeeeeecCeEEEEEE-----EecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 563 ERFEEKTVKEKGTIRLMAK-----VKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 563 ~~~~~~~v~~g~~v~l~C~-----~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
.....+.+|+.++|.|. +.|.|.|.|.|+|+|..+..+...... ..+...|.|.++.. +|+|.|+|.|.|.
T Consensus 127 --~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~-~~~~~~L~i~~v~~-~d~G~Y~C~a~n~ 202 (339)
T 3o4o_C 127 --SYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLS-VRGTTHLLVHDVAL-EDAGYYRCVLTFA 202 (339)
T ss_dssp --CEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEE-CTTSSEEEESSCCG-GGCEEEEEEEECC
T ss_pred --ccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEE-cCCcceEEEcccCH-hhCeEEEEEEEEC
Confidence 01346789999999999 899999999999999998765433332 23335799999999 9999999999999
Q ss_pred Ccc----eEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeEE
Q psy2775 638 LGS----ATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLK 713 (785)
Q Consensus 638 ~g~----~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~ 713 (785)
.|. ...++.|.|.... ...+|.+... +....+..|+.++
T Consensus 203 ~g~~~~~~~~~~~l~V~~~~------------------------------------~~~~P~i~~~-~~~~~v~~G~~v~ 245 (339)
T 3o4o_C 203 HEGQQYNITRSIELRIKKKK------------------------------------EETIPVIISP-LKTISASLGSRLT 245 (339)
T ss_dssp BTTBCCEEEEEEEEEEECCC------------------------------------CCCCCEECCC-SCCCCCCCCSCCC
T ss_pred CCCeEEEEEEEEEEEEEcCC------------------------------------CCCCCEEecC-CceeEeccCCCEE
Confidence 884 4555666665211 1134555442 4555688999999
Q ss_pred EEEEE---ecCC-CCceEEeECCEEeeec---------cccccchh----hhcccccceeeeeec-eEEEEEEecccce
Q psy2775 714 IEVRF---KALP-PPKAEWTVNGTVIVPS---------KRVKGKAE----FIKKLDDLEVKEREN-AVLEVEVTSDKAD 774 (785)
Q Consensus 714 l~C~~---~g~P-~p~i~W~~~~~~~~~~---------~~~~~~~~----~~~~l~~~~v~~~~~-~~~~c~~~~~~~~ 774 (785)
|.|.+ .|.| +|.+.|++||..+... .++..... +...|.+..+...|. |.|+|.+.+..+.
T Consensus 246 L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~ 324 (339)
T 3o4o_C 246 IPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSF 324 (339)
T ss_dssp CCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEE
T ss_pred EEEEEECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCc
Confidence 99999 9999 8899999999876432 22222111 112688999999997 9999999975443
No 91
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.95 E-value=1.8e-27 Score=244.82 Aligned_cols=273 Identities=13% Similarity=0.129 Sum_probs=178.7
Q ss_pred eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEEEEEcccCC
Q psy2775 96 GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCST 175 (785)
Q Consensus 96 ~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L~i~~~~~ 175 (785)
+++.......+......+|.|...+. ..+.+|+.++|.|.+.+. .+.+.|+|+|..+.... ........|.|.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~P~i~~~p~-~~v~~G~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~-~~~~~~~~L~I~~v~~ 83 (316)
T 3vh8_G 7 GSGSDDDDKGSHMGGQDKPFLSAWPS-AVVPRGGHVTLRCHYRHR-FNNFMLYKEDRIHIPIF-HGRIFQESFNMSPVTT 83 (316)
T ss_dssp -----------------CCEEEEESC-SEEETTSCEEEEEEBTTB-CCSEEEEESSCSSSCHH-HHCCBSSCEEECSCCG
T ss_pred CCCCCCcccccccCCCCCCEeeccCC-CccCCCCCEEEEEEccCC-CceEEEEeCCCccceee-cCCcceEEEEECCCCc
Confidence 33333333344444457788877765 568899999999999877 67999999998765421 1112345799999999
Q ss_pred CCcEEEEEEEEcCC-----eeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCC
Q psy2775 176 KDKGRYSVKVTNKE-----GTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEG 250 (785)
Q Consensus 176 ~d~G~Y~C~a~n~~-----g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G 250 (785)
+|+|.|+|.|.|.. +..+..+.|.|.... .+|.+...+... +.+|
T Consensus 84 ~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~-----------------------------~~p~~~~~~~~~-v~~G 133 (316)
T 3vh8_G 84 AHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNH-----------------------------RKPSLLAHPGPL-VKSG 133 (316)
T ss_dssp GGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSS-----------------------------CCCEEEEESCSE-EETT
T ss_pred ccCeEEEEEEEcCCCCcceecCCCcEEEEEecCC-----------------------------CCCeEEecCCCc-cCCC
Confidence 99999999998643 223344666665432 345565554443 7899
Q ss_pred CeEEEEEEEccCCCCeEEEEECCEEcccce----EEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCce-----EEEEEEE
Q psy2775 251 ESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ----ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV-----ESAANLN 321 (785)
Q Consensus 251 ~~~~l~C~~~g~p~~~v~W~~~~~~l~~~~----~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~-----~~~~~l~ 321 (785)
+.++|.|.+. .+++.+.|+++|..+.... .........|.|.++..+|+|.|+|.|.|..|.. ...+.|.
T Consensus 134 ~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~ 212 (316)
T 3vh8_G 134 ERVILQCWSD-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIV 212 (316)
T ss_dssp CCEEEEEEES-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEE
T ss_pred CeEEEEEcCC-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEE
Confidence 9999999995 4667999999998765221 1112245689999999999999999999987642 3346666
Q ss_pred Eecc--ccceeeeccceeEeeCccEEEEEEEcCCCCeEEEEECCEEcCCCCcEEEEEcC-cEEEEEEcCCCCCCceEEEE
Q psy2775 322 VDQG--KAEFIKKLDDLEVKERENAVLEVEVTSDKADVKWFKDGQEIKTSKKVTIEKKG-TIRKLLIRNISVHDEGEYTC 398 (785)
Q Consensus 322 v~~~--~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~v~W~~~~~~l~~~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C 398 (785)
|... ++.+...+ ...+.+|+.++|.|.+..+.+.+.|+++|..+...........+ ....|.|.+++ |+|.|+|
T Consensus 213 V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C 289 (316)
T 3vh8_G 213 VTGPYEKPSLSAQP-GPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRC 289 (316)
T ss_dssp EECSSCCCEEEEES-CSCCCTTSCCEEEEEESSCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEE
T ss_pred ecCCCCCCeEEeCC-CCeecCCCcEEEEEECCCCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEE
Confidence 7642 33333332 23678999999999999888999999999876532211111122 23569999999 9999999
Q ss_pred EEeccce
Q psy2775 399 SLPDQET 405 (785)
Q Consensus 399 ~a~n~~~ 405 (785)
.|.|..+
T Consensus 290 ~a~n~~~ 296 (316)
T 3vh8_G 290 FGSFRHS 296 (316)
T ss_dssp EEEBTTB
T ss_pred EeecCCC
Confidence 9998543
No 92
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.95 E-value=2e-24 Score=229.52 Aligned_cols=349 Identities=17% Similarity=0.259 Sum_probs=230.9
Q ss_pred CCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeEC--CEEcccc------e--EEEeCCEEEEEEcccCCCCcEEEE
Q psy2775 113 KPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKD--GKLIKDR------Q--ITSEKNTHTLTLIQCSTKDKGRYS 182 (785)
Q Consensus 113 ~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~--g~~~~~~------~--~~~~~~~~~L~i~~~~~~d~G~Y~ 182 (785)
+|.|.. +.+..+.+|+.+.|.|.+.|.|.+.|+|+|+ |..+... . +.......+|.|.+++.+|+|.|+
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 356665 4567788899999999999999999999999 8887542 2 222345779999999999999999
Q ss_pred EEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccC
Q psy2775 183 VKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE 262 (785)
Q Consensus 183 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~ 262 (785)
|.|.|..|..+..+.|.|.. +|.+...+....+.+|+.+.|.|.+.|.
T Consensus 80 C~a~n~~g~~~~~~~l~V~~--------------------------------~P~~~~~~~~~~~~~g~~~~l~C~~~g~ 127 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEY--------------------------------APKFISNQTIYYSWEGNPINISCDVKSN 127 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEE--------------------------------EEEECCSCCEEEECTTCCEEEEECEEEE
T ss_pred EEEEeCCCCcceEEEEEEEe--------------------------------CCEEecCcceEEeccCCEEEEEEEEEec
Confidence 99999999988889999873 2455554444567899999999999999
Q ss_pred CCCeEEEEECCEEccc-----ceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEEEEEEEeccccceeeecccee
Q psy2775 263 PSPKVEWYKDGKLIKD-----RQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDQGKAEFIKKLDDLE 337 (785)
Q Consensus 263 p~~~v~W~~~~~~l~~-----~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~ 337 (785)
|.+.+.|+++|..+.. ..+........|.|.++..+|+|.|+|.|.|..|.....+.+.+...|.... .. ...
T Consensus 128 p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~P~-~~-~~~ 205 (389)
T 2jll_A 128 PPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPY-GV-KII 205 (389)
T ss_dssp SCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCCCE-EE-EEE
T ss_pred CCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCCCc-ce-EEe
Confidence 9999999999998862 2233445567899999999999999999999999988888887765433211 11 112
Q ss_pred EeeCccEEEEEEEcC---CCC----eEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEeccceEEE--
Q psy2775 338 VKERENAVLEVEVTS---DKA----DVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLPDQETSAE-- 408 (785)
Q Consensus 338 ~~~g~~~~l~C~~~~---~~~----~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~-- 408 (785)
...+..+.|.|.... ..+ .+.|.+++... .......+....|.|.++...+.|.|+|.|.|..+...
T Consensus 206 ~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~----~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s 281 (389)
T 2jll_A 206 ELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEI----WKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYS 281 (389)
T ss_dssp EECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSC----CEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCC
T ss_pred eccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcc----cEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCC
Confidence 233567888887532 112 56777765421 11222333334599999999999999999998765322
Q ss_pred --EEEEecCCcccccCCCe-EEecCCcEEEEEEEeC--CCc--e--EEEEECCEEcccCCCEEEEEeCcEEEEEEccCCC
Q psy2775 409 --LNVVELPPEISVPLQDV-KVSRDEKASFEIELTK--GDA--L--VKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGL 479 (785)
Q Consensus 409 --~~v~~~~~~~~~~~~~~-~v~~g~~~~l~C~~~~--~~~--~--i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 479 (785)
+.+...+.....++... ....+..+.|.+.... +.+ . +.|...+..- ........+....++|.++..
T Consensus 282 ~~~~~~t~~~~~p~~p~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~~i~~L~~ 358 (389)
T 2jll_A 282 KIEIFQTLPVREPSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKED---QWLEKKVQGNKDHIILEHLQW 358 (389)
T ss_dssp CCEEEECCCCCCCCCCCEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC--------CCBCCEECTTCCEEEECSCCT
T ss_pred cceEEEecCCCCCCCCccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCc---ceeEeeccCCcceEEeCCcCC
Confidence 22222221111222211 1224567777766422 111 1 2332211110 000111223334678889998
Q ss_pred CCcEEEEEEEeec-CcceeEEEEEEE
Q psy2775 480 EDAGEYSCRVGDT-GDKESKATLTVE 504 (785)
Q Consensus 480 ~d~G~Y~C~a~n~-g~~~~~~~l~V~ 504 (785)
.....|+..|.|. |... ...+.+.
T Consensus 359 ~t~Y~~~V~A~n~~G~s~-~s~~~~~ 383 (389)
T 2jll_A 359 TMGYEVQITAANRLGYSE-PTVYEFS 383 (389)
T ss_dssp TCEEEEEEEEEC-CCBCC-CEEEEEE
T ss_pred CCEEEEEEEEEcCCcCCC-ceeeEec
Confidence 8889999999997 5433 3333444
No 93
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.95 E-value=2e-25 Score=228.51 Aligned_cols=266 Identities=22% Similarity=0.336 Sum_probs=203.6
Q ss_pred ccceeeeccceeEeeCccEEEEEEEcC-CCCeEEEEECCEEcCCCC-cEEEEE-cCcEEEEEEcCCCCCCceEEEEEEec
Q psy2775 326 KAEFIKKLDDLEVKERENAVLEVEVTS-DKADVKWFKDGQEIKTSK-KVTIEK-KGTIRKLLIRNISVHDEGEYTCSLPD 402 (785)
Q Consensus 326 ~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~v~W~~~~~~l~~~~-~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n 402 (785)
+|.+...+....+.+|+.++|.|.+.+ |.+.++|+++|..+.... ++.+.. .+....|.|.++..+|+|.|+|.|.|
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 83 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATN 83 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEE
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEc
Confidence 566777777889999999999999977 678999999999987654 554433 45556799999999999999999998
Q ss_pred cceEE----EEEEEecC----CcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEE
Q psy2775 403 QETSA----ELNVVELP----PEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLI 473 (785)
Q Consensus 403 ~~~~~----~~~v~~~~----~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~ 473 (785)
..+.. .+.|...| +.....+....+..|+.+.|.|.+.+ +.+.+.|++++..+....++.+...+....|.
T Consensus 84 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (305)
T 2nzi_A 84 QGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLV 163 (305)
T ss_dssp TTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEE
T ss_pred CCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEE
Confidence 76543 33333211 22222345677889999999999998 78899999999998888888887777778999
Q ss_pred Ecc-CCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEE-ecCCceeeEEeeccccccc
Q psy2775 474 IFS-AGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVE-LSSPDIQVKWLNLFIVPTC 550 (785)
Q Consensus 474 i~~-~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~W~~~~~~~~~ 550 (785)
|.+ +..+|+|.|+|.|.|. |....++.|.|..+|.. | ..+.+. +....+.+.|..+.
T Consensus 164 i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~-----p----------~~~~~~~~~~~~v~l~w~~p~----- 223 (305)
T 2nzi_A 164 FPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDP-----P----------RGVKVSDVSRDSVNLTWTEPA----- 223 (305)
T ss_dssp ETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCC-----C----------EEEEEESCCSSCEEEEEECCS-----
T ss_pred EecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCC-----C----------CCceeeeccCCEEEEEEcCCc-----
Confidence 999 9999999999999998 88888899998876421 1 111221 33456667774221
Q ss_pred CCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeE
Q psy2775 551 PLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDY 630 (785)
Q Consensus 551 ~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y 630 (785)
..|....+.|.+.+.|.+...|++.+... ...|.|.++.. .+.|.|
T Consensus 224 --------------------~~g~~~i~~y~v~~~~~~~~~w~~~~~~~-------------~~~~~i~~l~~-~~~y~~ 269 (305)
T 2nzi_A 224 --------------------SDGGSKITNYIVEKCATTAERWLRVGQAR-------------ETRYTVINLFG-KTSYQF 269 (305)
T ss_dssp --------------------CCSBSCEEEEEEEEEETTSCCEEEEEEES-------------SSEEEECSCCS-SCEEEE
T ss_pred --------------------cCCCCceeEEEEEEecCCCCccEECcccc-------------CceEEecCCCC-CCeEEE
Confidence 23555678899988888899998865432 33589999999 999999
Q ss_pred EEEEEcCCcceEEEE
Q psy2775 631 KVVATNELGSATHGA 645 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~ 645 (785)
+|.|.|..|....+.
T Consensus 270 ~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 270 RVIAENKFGLSKPSE 284 (305)
T ss_dssp EEEEEETTEECCCCC
T ss_pred EEEEEeCCcccCCcC
Confidence 999999999765543
No 94
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.94 E-value=5.8e-27 Score=241.74 Aligned_cols=276 Identities=13% Similarity=0.173 Sum_probs=181.5
Q ss_pred cCCCCeeeecCCceEecCC--CeEEEEEEEEec-C-CCeeEEEECCEEccCCCCE-EEeecCCccceEEEEEEcccCCCC
Q psy2775 9 EGIPPTFSKKTKPVYAEEN--SEVTLEVRLVAV-P-EPDLLWYYNGEPLQETDEV-VFSDQSDMHSYVSIVTIKSIKKRE 83 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G--~~v~l~C~~~g~-p-~~~i~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~D 83 (785)
...||.+...+.......| ++++|.|.+.|. | .+.|.|+++|..+...... .....++.....+.|+|.+++.+|
T Consensus 4 ~~~~P~v~~~~~~~~~~~~~~~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d 83 (323)
T 2wqr_A 4 DFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLS 83 (323)
T ss_dssp CCCCCCCEEEEECCCTTSCCCSEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHT
T ss_pred CCCCCEEEEeCCChHHhccCCCcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCC
Confidence 3457777665444334445 699999999886 4 4789999999988654321 111123444445679999999999
Q ss_pred CeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCce-ecCCCceEeccCCcEEEEEEEecc-CCC---eEEEeECC-EEcccc
Q psy2775 84 EGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSI-LEPLHDVSITEGESAVLSVQVGGE-PSP---KVEWYKDG-KLIKDR 157 (785)
Q Consensus 84 ~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i-~~~~~~~~~~~G~~v~l~C~~~g~-p~~---~v~W~~~g-~~~~~~ 157 (785)
+|.|+|.|.|..+.....+.+.+.. ....|.+ ..++....+.+|+.+.|.|.+.|. |.+ .|+|++++ ..+...
T Consensus 84 ~g~Y~C~a~n~~~~~~~~~~~~~~~-~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~ 162 (323)
T 2wqr_A 84 DRTYTCQVTYQGHTFEDSTKKCADS-NPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHS 162 (323)
T ss_dssp TCCEEEEEEETTEEEEEEECCCCCS-SGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCC
T ss_pred CCcEEEEEEeCCCCcceeeecCCCC-CCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccc
Confidence 9999999999887655443321111 1123333 444555668899999999999875 455 89999964 444321
Q ss_pred e-EE--EeC----CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecC
Q psy2775 158 Q-IT--SEK----NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNT 230 (785)
Q Consensus 158 ~-~~--~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (785)
. .. ... ....|.|.++..+|+|.|+|.|.|..+... ..+.|....
T Consensus 163 ~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~--~~~~v~~~~-------------------------- 214 (323)
T 2wqr_A 163 TRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRA--LMRSTTKTS-------------------------- 214 (323)
T ss_dssp CCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC--EEEEECCCC--------------------------
T ss_pred cCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCC--eeeEEEccC--------------------------
Confidence 1 11 111 245799999999999999999999864322 233332110
Q ss_pred CCCCCCeeeecCCcceeCCCCeEEEEEEEcc-CCCC-eEEEEECCEEcccceEE------EeC----CEEEEEEccCCCC
Q psy2775 231 GKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVEWYKDGKLIKDRQIT------SEK----NTHTLTLIQCSTK 298 (785)
Q Consensus 231 ~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~~-~v~W~~~~~~l~~~~~~------~~~----~~~~l~i~~~~~~ 298 (785)
....+|.+...+.......|+.++|.|.+.| .|++ .|.|+++|..+...... ..+ ..+.|.|..+..+
T Consensus 215 ~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~ 294 (323)
T 2wqr_A 215 GPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWE 294 (323)
T ss_dssp SCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHH
T ss_pred CCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHcc
Confidence 0013344443222222234999999999988 4543 89999999988633111 111 1357999999999
Q ss_pred CCeEEEEEEEeCCCc
Q psy2775 299 DKGRYSVKVTNKEGT 313 (785)
Q Consensus 299 d~G~Y~C~~~n~~g~ 313 (785)
|+|.|+|.|.|....
T Consensus 295 d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 295 QKDEFICRAVHEAAS 309 (323)
T ss_dssp HCCCEEEEEECTTST
T ss_pred CCCEEEEEEEeCCCC
Confidence 999999999998765
No 95
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.94 E-value=9.9e-26 Score=213.85 Aligned_cols=187 Identities=31% Similarity=0.493 Sum_probs=160.2
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCC--CEEEEEeCcEEEEEEccCCCCCcEEEEEEEe
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSE--NVTLSIDGKKQKLIIFSAGLEDAGEYSCRVG 490 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~--~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 490 (785)
.+|.+...+....+.+|+.++|.|.+.+ +.+.+.|++++..+.... +..+...+....|.|.+++.+|+|.|+|.|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 3567777778889999999999999988 778999999999887654 5666667777899999999999999999999
Q ss_pred ec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeee
Q psy2775 491 DT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKT 569 (785)
Q Consensus 491 n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 569 (785)
|. |....+..|.|..... +|.+...+....
T Consensus 84 n~~~~~~~~~~l~v~~~~~-------------------------------------------------~p~~~~~~~~~~ 114 (194)
T 2a38_A 84 NGSGQATSTAELLVKAETA-------------------------------------------------PPNFVQRLQSMT 114 (194)
T ss_dssp ETTEEEEEEEEEEEECCCE-------------------------------------------------EEEEEECCCCEE
T ss_pred cCCceEeEEEEEEEccCCC-------------------------------------------------CCEEEeCCccEE
Confidence 97 6667777888875321 155555566778
Q ss_pred eeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEE
Q psy2775 570 VKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTV 649 (785)
Q Consensus 570 v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 649 (785)
+.+|+.++|.|.+.|+|.|.+.|+|+|..+..+.++.+..++...+|.|.++.. +|+|.|+|.|.|..|....++.|.|
T Consensus 115 ~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 115 VRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYP-EDSGTYSVNATNSVGRATSTAELLV 193 (194)
T ss_dssp ECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECG-GGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCCh-hcCeEEEEEEEeCCCceEEEEEEEE
Confidence 999999999999999999999999999999888888777788888999999999 9999999999999999998888887
Q ss_pred E
Q psy2775 650 D 650 (785)
Q Consensus 650 ~ 650 (785)
+
T Consensus 194 ~ 194 (194)
T 2a38_A 194 Q 194 (194)
T ss_dssp C
T ss_pred C
Confidence 3
No 96
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.94 E-value=1.6e-25 Score=232.26 Aligned_cols=261 Identities=17% Similarity=0.215 Sum_probs=186.9
Q ss_pred CCceecCCCceEeccCCcEEEEEEEecc----CCCeEEEeECC--EEc-------------c---cceEEE---eCCEEE
Q psy2775 113 KPSILEPLHDVSITEGESAVLSVQVGGE----PSPKVEWYKDG--KLI-------------K---DRQITS---EKNTHT 167 (785)
Q Consensus 113 ~p~i~~~~~~~~~~~G~~v~l~C~~~g~----p~~~v~W~~~g--~~~-------------~---~~~~~~---~~~~~~ 167 (785)
++.+...+..+.+.+|+.+.|.|.+.+. +.+.+.|++++ ... . ...+.. .....+
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 93 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGT 93 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCC
T ss_pred CcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCce
Confidence 3344455567889999999999999775 44579999954 111 0 011111 223557
Q ss_pred EEEcccCCCCcEEEEEE-EEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCee--eecCCc
Q psy2775 168 LTLIQCSTKDKGRYSVK-VTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSI--LEPLHD 244 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~-a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~ 244 (785)
|.|.+++.+|+|.|+|. +.+..+.....+.|.|... |.+ ......
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~--------------------------------p~~~~~~~~~~ 141 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAK--------------------------------PTNWIEGTQAV 141 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC--------------------------------CEEEEEECSSC
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecC--------------------------------CcceeecCCCc
Confidence 99999999999999998 5566787777888888743 222 223445
Q ss_pred ceeCCC---CeEEEEEE-EccCCCCeEEEEECCEEccc-ceEEEeCC----EEEEEEccCCCCCCeEEEEEEEeCCCceE
Q psy2775 245 VSITEG---ESAVLSVQ-VGGEPSPKVEWYKDGKLIKD-RQITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVE 315 (785)
Q Consensus 245 ~~~~~G---~~~~l~C~-~~g~p~~~v~W~~~~~~l~~-~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 315 (785)
..+.+| +.+.|.|. +.+.|.+.+.|++++..... .......+ ...|.|..+..+|+|.|+|.|.|..|...
T Consensus 142 ~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 221 (331)
T 3u83_A 142 LRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFK 221 (331)
T ss_dssp EEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEE
T ss_pred eeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcce
Confidence 667788 77999998 78999999999995322211 11111111 24699999999999999999999998888
Q ss_pred EEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC-CCCe-EEEEECCEEcCCCCcEEEEEcCcEEEEEEc-CCCCCC
Q psy2775 316 SAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS-DKAD-VKWFKDGQEIKTSKKVTIEKKGTIRKLLIR-NISVHD 392 (785)
Q Consensus 316 ~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~-~~~~-v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~-~~~~~d 392 (785)
.++.|.|...|...........+.+|+.+.|.|.+.+ |.+. +.|++++..+..... ..++ .|.|. ++..+|
T Consensus 222 ~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~~~~~---~~~~---~L~i~~~v~~~d 295 (331)
T 3u83_A 222 ESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVE---AQNR---TLFFKGPINYSL 295 (331)
T ss_dssp EEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCCTTEE---EETT---EEEECSCCCGGG
T ss_pred eeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCcccccce---ecCc---EEEEeCCCcccc
Confidence 8888888865543334445556888999999999987 6676 999999988865422 2333 39999 999999
Q ss_pred ceEEEEEEeccceEEEEEE
Q psy2775 393 EGEYTCSLPDQETSAELNV 411 (785)
Q Consensus 393 ~G~Y~C~a~n~~~~~~~~v 411 (785)
+|.|+|.|.|..+.....+
T Consensus 296 ~G~Y~C~a~N~~G~~~~~~ 314 (331)
T 3u83_A 296 AGTYICEATNPIGTRSGQV 314 (331)
T ss_dssp CEEEEEEEEETTEEEEEEE
T ss_pred CeEEEEEEEeccccceEEE
Confidence 9999999999877665443
No 97
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.94 E-value=5.2e-25 Score=208.83 Aligned_cols=188 Identities=29% Similarity=0.507 Sum_probs=158.2
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCC--CEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETD--EVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
...||.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+.... +..+...++ ...|+|.+++.+|+|.
T Consensus 2 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~ 77 (194)
T 2a38_A 2 TTQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDG----RAKLTIPAVTKANSGR 77 (194)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETT----EEEEEESSCCGGGCEE
T ss_pred CCCCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCC----EEEEEECCCCcccCEE
Confidence 4578999999999999999999999999999999999999998876653 344433322 2569999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEEEeC
Q psy2775 87 YTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QITSEK 163 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~~~~ 163 (785)
|+|.+.|..+.......|.|.. ...+|.+...+....+..|+.+.|.|.+.|.|.+.++|+++|..+... .....+
T Consensus 78 Y~C~~~n~~~~~~~~~~l~v~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~ 156 (194)
T 2a38_A 78 YSLKATNGSGQATSTAELLVKA-ETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEG 156 (194)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC-CCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEET
T ss_pred EEEEEEcCCceEeEEEEEEEcc-CCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcC
Confidence 9999999999888877787763 234667777777888999999999999999999999999999988654 234445
Q ss_pred CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 164 NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
...+|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 157 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 157 DLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp TEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 56689999999999999999999999998888888773
No 98
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.93 E-value=1.1e-25 Score=234.22 Aligned_cols=287 Identities=15% Similarity=0.217 Sum_probs=179.2
Q ss_pred eecCCceEecCCCeEEEEEEEEecC--CCeeEEEEC--CEEcc-----------------CCCCEEEeecCCccceEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYN--GEPLQ-----------------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~--~~~~~-----------------~~~~~~~~~~~~~~~~~~~L 74 (785)
...|..+.+.+|++++|.|.+.+.+ .+.|.|+|+ +..+. ...++.+..+.. ....+|
T Consensus 4 l~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L 81 (344)
T 1za6_B 4 LVQSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTS--ASTAYV 81 (344)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETT--TTEEEE
T ss_pred eeCCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecC--CCEEEE
Confidence 3456678999999999999998863 578999997 32210 123454443321 123569
Q ss_pred EEcccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC-CeEEEeECCE
Q psy2775 75 TIKSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS-PKVEWYKDGK 152 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~-~~v~W~~~g~ 152 (785)
+|.+++.+|+|.|+|.|.|..+.......|.|....+.+|.+........+.+|+.+.|.|.+.|. |. +.|+|+++|.
T Consensus 82 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~ 161 (344)
T 1za6_B 82 ELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 161 (344)
T ss_dssp EECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTB
T ss_pred EECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCc
Confidence 999999999999999999966555455677776544556666544334456799999999999886 54 6999999997
Q ss_pred Ecccc---eEEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCCCCCCCCCCCCCccccccce
Q psy2775 153 LIKDR---QITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYEPKESKETPPSPPPYVVSELDT 225 (785)
Q Consensus 153 ~~~~~---~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (785)
.+... .....++ ...|.|.++..+| |.|+|.|.|..+.......+.+..... . ...++ ......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~-~-~~~~~------~~~~~~ 232 (344)
T 1za6_B 162 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDK-T-HTCPP------CGGGSS 232 (344)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC----------------------
T ss_pred cCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeeccccccc-c-cccCC------CCCCcc
Confidence 64211 0111111 3478998888878 999999999887654433332110000 0 00000 000000
Q ss_pred eeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccC-C-CCeEEEEECCEEcccce---EE-EeCC----EEEEEEccC
Q psy2775 226 LQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-P-SPKVEWYKDGKLIKDRQ---IT-SEKN----THTLTLIQC 295 (785)
Q Consensus 226 ~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p-~~~v~W~~~~~~l~~~~---~~-~~~~----~~~l~i~~~ 295 (785)
+........+|.+..........+|..++|.|.+.|. | .+.++|+++|..+.... .. ..++ .+.|.|...
T Consensus 233 l~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~ 312 (344)
T 1za6_B 233 GGGSGGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKS 312 (344)
T ss_dssp ------CCBCCEEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHH
T ss_pred ccccCCCCcCCEEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChH
Confidence 0000011234555443333223356679999999885 4 35899999998876321 11 1122 235677777
Q ss_pred CCCCCeEEEEEEEeCCCc
Q psy2775 296 STKDKGRYSVKVTNKEGT 313 (785)
Q Consensus 296 ~~~d~G~Y~C~~~n~~g~ 313 (785)
..+|+|.|+|.|.|....
T Consensus 313 ~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 313 RWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp HHHTTCEEEEEEECTTST
T ss_pred HccCCCeEEEEEEcCCCC
Confidence 777899999999997543
No 99
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.93 E-value=9e-25 Score=210.32 Aligned_cols=189 Identities=21% Similarity=0.385 Sum_probs=156.0
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEcc-CCCCEEEeecCCccceEEEEEEcccCC-CCCeEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQ-ETDEVVFSDQSDMHSYVSIVTIKSIKK-REEGVY 87 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y 87 (785)
..||.|...|..+.+.+|++++|.|.+.|.|.+.|.|++++..+. ...++.+....+. .++|+|.+++. +|+|.|
T Consensus 4 ~~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~~d~G~Y 80 (212)
T 2yd1_A 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGG---ISILRIEPVRAGRDDAPY 80 (212)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTT---EEEEEESSCCTTTTCSEE
T ss_pred CCCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCC---eEEEEEEecCCCCcCceE
Confidence 478999999999999999999999999999999999999999986 4455555443221 25699999999 999999
Q ss_pred EEEEEcCCee-EEEEeeEEEeCCCCC---CCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc--eEEE
Q psy2775 88 TVVAKNREGE-AKMDIPVKVNTGKPE---KPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR--QITS 161 (785)
Q Consensus 88 ~C~a~~~~~~-~~~~~~v~v~~~~~~---~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~--~~~~ 161 (785)
+|.|.|..+. ....+.|.|...... .|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+... ....
T Consensus 81 ~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~ 160 (212)
T 2yd1_A 81 ECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSL 160 (212)
T ss_dssp EEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEE
T ss_pred EEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEc
Confidence 9999999887 677788888753222 267777777888999999999999999999999999999998653 2222
Q ss_pred eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE-EEEEeecC
Q psy2775 162 EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVDPY 203 (785)
Q Consensus 162 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~ 203 (785)
.. .+|.|.++..+|+|.|+|.|.|..|...+. +.|.|...
T Consensus 161 ~~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 161 KD--GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp ET--TEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred cC--CeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEec
Confidence 22 279999999999999999999999988765 88988754
No 100
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.93 E-value=5.7e-25 Score=209.38 Aligned_cols=198 Identities=22% Similarity=0.309 Sum_probs=145.8
Q ss_pred CcccccCCCeEEecCCcEEEEEEEeC--CCceEEEEECCEEcccCCCEEEEEeC--cEEEEEEccCCCCCcEEEEEEEee
Q psy2775 416 PEISVPLQDVKVSRDEKASFEIELTK--GDALVKWYKDGKEIAFSENVTLSIDG--KKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 416 ~~~~~~~~~~~v~~g~~~~l~C~~~~--~~~~i~W~~~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
|.+..+. +..+.+|+.+.|.|.+.. |.|.|+|+|||.++..+.++.+..++ ....|.|.+++.+|+|.|+|.|.|
T Consensus 4 p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 4 PFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp --CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred CeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 4444433 567889999999999964 78899999999999888888877765 567899999999999999999999
Q ss_pred cCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeee
Q psy2775 492 TGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVK 571 (785)
Q Consensus 492 ~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~ 571 (785)
|.......+.+................. ......+|.|...+ ...+.
T Consensus 83 -g~a~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~P~~~~~~-~~~v~ 129 (207)
T 3rbs_A 83 -GKATNHSTVVLVGDVFKKLQKEAEFQRQ-------------------------------EWIRKQGPHFVEYL-SWEVT 129 (207)
T ss_dssp -TTEEEEEEEEECTHHHHHHHHHHHHHHH-------------------------------HHHHHTSSEEEEEE-EEEEE
T ss_pred -CCeEEEEEEEEEccchhhhccccccccc-------------------------------ccccCCCCceEecC-CcEEc
Confidence 4444444443322111000000000000 00000137777766 47899
Q ss_pred ecCeEEEEEEEecC-CCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 572 EKGTIRLMAKVKAS-PAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 572 ~g~~v~l~C~~~g~-P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+|+.++|.|.+.|. |.|.|+|+|||.++..+.++ ....+..+|.|.++.. +|+|.|+|.|.|..|.+.+++.|.++
T Consensus 130 ~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~~~~--~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 130 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKH--DFKDGICTLLITEFSK-KDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp TTTEEEEEEEEESCCTTCEEEEEETTEEECCCCCC--CCSSEEEEEEETTCCG-GGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CCCcEEEEEEEeCCCCCCEEEEEECCEECCCCCce--EcCCCEEEEEECCCCc-ccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 99999999999999 99999999999999776543 3345567899999999 99999999999999999998888653
No 101
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.93 E-value=2.3e-24 Score=207.36 Aligned_cols=191 Identities=23% Similarity=0.363 Sum_probs=154.4
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEccc-CCCCCeEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSI-KKREEGVY 87 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~-~~~D~G~Y 87 (785)
...||.|...|..+.+.+|+++.|.|.+.|.|.+.|.|++++..+............. ..+.|.|.++ +.+|+|.|
T Consensus 3 ~~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~~d~G~Y 79 (212)
T 2yd6_A 3 GETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDG---SGSVLRIQPLRTPRDEAIY 79 (212)
T ss_dssp -CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGG---TEEEEEECSCCTTTTCEEE
T ss_pred CCCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCC---CceEEEEeccCCCCCCeEE
Confidence 3578999999999999999999999999999999999999999887654333332221 1256999999 59999999
Q ss_pred EEEEEcCCeeEEEEeeEEEeCCC---CCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc------e
Q psy2775 88 TVVAKNREGEAKMDIPVKVNTGK---PEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR------Q 158 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~~~---~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~------~ 158 (785)
+|.|.|..+.....+.|.|.... +..|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+... .
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~ 159 (212)
T 2yd6_A 80 ECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIK 159 (212)
T ss_dssp EEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEE
T ss_pred EEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEE
Confidence 99999999988888888886421 23467777777788899999999999999999999999999988653 1
Q ss_pred EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE-EEEEeec
Q psy2775 159 ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVDP 202 (785)
Q Consensus 159 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~ 202 (785)
.........|.|.++..+|+|.|+|.|.|..|...+. +.|.|..
T Consensus 160 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 160 QLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRG 204 (212)
T ss_dssp EEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEe
Confidence 2223456899999999999999999999999987654 6777763
No 102
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.93 E-value=1.4e-24 Score=206.34 Aligned_cols=189 Identities=24% Similarity=0.379 Sum_probs=156.9
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccC-CCEEEEE-eCcEEEEEEccCCCCCcEEEEEEEe
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFS-ENVTLSI-DGKKQKLIIFSAGLEDAGEYSCRVG 490 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~-~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~ 490 (785)
.||.+...+....+.+|+.++|.|.+.+ +.+.+.|++++..+... .++.+.. .+....|.|.+++.+|+|.|+|.|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 4677878888899999999999999988 67889999999988654 3455443 4556799999999999999999999
Q ss_pred ec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeee
Q psy2775 491 DT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKT 569 (785)
Q Consensus 491 n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 569 (785)
|. |.....+.|.|..++... .|.+...+....
T Consensus 83 n~~g~~~~~~~l~V~~~p~~~-----------------------------------------------~~~~~~~~~~~~ 115 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKIH-----------------------------------------------LPKTLEGMGAVH 115 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEEC-----------------------------------------------CSSCBTTBEEEE
T ss_pred ECCCceeEEEEEEEcCCCcCC-----------------------------------------------CCccccccCeEE
Confidence 97 777778888887654210 022222334567
Q ss_pred eeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEcc-CCCCCCceeEEEEEEcCCcceEEEEEEE
Q psy2775 570 VKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKE-ADSETDAGDYKVVATNELGSATHGARVT 648 (785)
Q Consensus 570 v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~-~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 648 (785)
+.+|+.++|.|.+.|+|.|.+.|+|++..+..+.++.+...+...+|.|.+ +.. +|+|.|+|.|.|..|....++.|.
T Consensus 116 ~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~-~d~G~Y~C~a~N~~g~~~~~~~l~ 194 (197)
T 2j8h_A 116 ALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVER-KDAGFYVVCAKNRFGIDQKTVELD 194 (197)
T ss_dssp EETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCG-GGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCc-ccCEeEEEEEEeCCCcEeEEEEEE
Confidence 889999999999999999999999999999888787777777888999999 999 999999999999999998888888
Q ss_pred EE
Q psy2775 649 VD 650 (785)
Q Consensus 649 V~ 650 (785)
|.
T Consensus 195 V~ 196 (197)
T 2j8h_A 195 VA 196 (197)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 103
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.93 E-value=1.8e-24 Score=205.68 Aligned_cols=189 Identities=25% Similarity=0.368 Sum_probs=159.5
Q ss_pred ecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEee
Q psy2775 413 ELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 413 ~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
..+|.+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+....++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 34677777788889999999999999987 67789999999999888888888888888999999999999999999999
Q ss_pred c-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeee
Q psy2775 492 T-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTV 570 (785)
Q Consensus 492 ~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 570 (785)
. |.......|.|..++...... .......+
T Consensus 85 ~~~~~~~~~~l~v~~~p~~~~~~-------------------------------------------------~~~~~~~~ 115 (197)
T 3lcy_A 85 EVGEVETSSKLLLQATPQFHPGY-------------------------------------------------PLKEKYYG 115 (197)
T ss_dssp SSCEEEEEEEEEEEEEEEECTTS-------------------------------------------------CCCSEEEE
T ss_pred CCCceeEEEEEEEEcCCCCCCCc-------------------------------------------------cCCcceee
Confidence 7 777788888887664211100 00124467
Q ss_pred eecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 571 KEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.+|+.++|.|.+.|+|.|.+.|++++..+..+.+..+...+....|.|.++...+|+|.|+|.|.|..|....++.|.|.
T Consensus 116 ~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 116 AVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp ETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEe
Confidence 88999999999999999999999999999888777777777778999999983179999999999999999888888875
No 104
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.93 E-value=7.5e-24 Score=199.93 Aligned_cols=177 Identities=23% Similarity=0.315 Sum_probs=144.8
Q ss_pred CCcccccCCCeEEec-CCcEEEEEEEeC-CC--ceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEe
Q psy2775 415 PPEISVPLQDVKVSR-DEKASFEIELTK-GD--ALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVG 490 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~-g~~~~l~C~~~~-~~--~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 490 (785)
||.+..+ ....+.+ |+.++|.|.+.+ +. +.+.|++++..+....... ....|.|.+++.+|+|.|+|.|.
T Consensus 3 ~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~ 76 (190)
T 2wv3_A 3 EPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYH 76 (190)
T ss_dssp CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEE
Confidence 5556553 4455666 999999999987 44 6799999999886554322 34689999999999999999999
Q ss_pred ecCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeee
Q psy2775 491 DTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTV 570 (785)
Q Consensus 491 n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 570 (785)
|.+....++.|.|..+ |.+...+....+
T Consensus 77 n~~~~~~~~~l~V~~~----------------------------------------------------p~~~~~~~~~~~ 104 (190)
T 2wv3_A 77 FVSAPKANATIEVKAA----------------------------------------------------PDITGHKRSENK 104 (190)
T ss_dssp ETTEEEEEEEEEEECC----------------------------------------------------CEEEEECSEEEE
T ss_pred eCCcccccEEEEEecC----------------------------------------------------CcccccCCccee
Confidence 9866667788888765 445555556789
Q ss_pred eecCeEEEEEEEecCCCCceEEEe--CCEEec---CCCCeeEEeeCCeEEEEEccCC-CCCCceeEEEEEEcCCcceEEE
Q psy2775 571 KEKGTIRLMAKVKASPAPSIVWFR--NNKPLL---SSPKKREIFDGENIILELKEAD-SETDAGDYKVVATNELGSATHG 644 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~P~p~v~W~~--~~~~i~---~~~~~~~~~~~~~~~L~i~~~~-~~~d~G~Y~C~a~n~~g~~~~~ 644 (785)
.+|+.++|.|.+.|+|.|.+.|++ ++..+. .+.++.+...+...+|.|.++. . +|+|.|+|.|.|..|....+
T Consensus 105 ~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~-~d~G~Y~C~a~N~~g~~~~~ 183 (190)
T 2wv3_A 105 NEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQIT-EDPGEYECNATNSIGSASVS 183 (190)
T ss_dssp ETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTT-TSCEEEEEEEECSSCEEEEE
T ss_pred eCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEecccc-CCCEEEEEEEEecCCcceeE
Confidence 999999999999999999999999 788764 4455666666677899999999 8 99999999999999999999
Q ss_pred EEEEEE
Q psy2775 645 ARVTVD 650 (785)
Q Consensus 645 ~~l~V~ 650 (785)
+.|.|+
T Consensus 184 ~~l~V~ 189 (190)
T 2wv3_A 184 TVLRVR 189 (190)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999886
No 105
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.93 E-value=1.2e-24 Score=207.11 Aligned_cols=186 Identities=19% Similarity=0.276 Sum_probs=142.4
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEE-ecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLV-AVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
+++|.|..+. .+.+.+|+.+.|.|.+. +.|.+.|.|++|+..+..+.++.+..+... ...+|.|.+++.+|+|.|+
T Consensus 1 ~~~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~--g~~~L~I~~v~~~D~G~Y~ 77 (207)
T 3rbs_A 1 GIDPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNT--GIIEMFMEKLQDEDEGTYT 77 (207)
T ss_dssp -----CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTT--CEEEEEESCCCGGGCEEEE
T ss_pred CCCCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCC--CEEEEEECCCChhhCEEEE
Confidence 4789998866 68999999999999985 469999999999999988877766654321 2346999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEeCC-----------------CCCCCceecCCCceEeccCCcEEEEEEEecc-CCCeEEEeEC
Q psy2775 89 VVAKNREGEAKMDIPVKVNTG-----------------KPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSPKVEWYKD 150 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~~-----------------~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~~v~W~~~ 150 (785)
|.|.|.. ......+.+... ...+|.+..++ ...+.+|+.+.|.|.+.|. |.+.|+|+||
T Consensus 78 C~a~Ng~--a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~ 154 (207)
T 3rbs_A 78 FQLQDGK--ATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKD 154 (207)
T ss_dssp EEEEETT--EEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEET
T ss_pred EEEECCC--eEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEEC
Confidence 9999943 333333322100 00256666555 4788899999999999998 8999999999
Q ss_pred CEEcccce-EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 151 GKLIKDRQ-ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 151 g~~~~~~~-~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
|.++.... .....+..+|.|.++..+|+|.|+|.|.|..|....++.|.+.
T Consensus 155 g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 155 EREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp TEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred CEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 99986542 2233445689999999999999999999999999998888763
No 106
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.93 E-value=3.9e-24 Score=203.29 Aligned_cols=185 Identities=23% Similarity=0.402 Sum_probs=152.5
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCC-CCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQET-DEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
..||.|...|..+.+.+|++++|.|.+.+.|.+.+.|++++..+... .++.+....+. ...|+|.+++.+|+|.|+
T Consensus 2 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~ 78 (197)
T 2j8h_A 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG---YHQLIIASVTDDDATVYQ 78 (197)
T ss_dssp -CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTT---EEEEEECSCCGGGCSEEE
T ss_pred CCCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCC---EEEEEECcCCHHhCEEEE
Confidence 36899999999999999999999999999999999999999988654 34444432221 246999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEeCCCCCCCcee-----cCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEE
Q psy2775 89 VVAKNREGEAKMDIPVKVNTGKPEKPSIL-----EPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QIT 160 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~~~~~~p~i~-----~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~ 160 (785)
|.|.|..+.....+.|.|.. +|.+. ..+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+... ...
T Consensus 79 C~~~n~~g~~~~~~~l~V~~----~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~ 154 (197)
T 2j8h_A 79 VRATNQGGSVSGTASLEVEV----PAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVI 154 (197)
T ss_dssp EEEEETTEEEEEEEEEEEEE----EEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEE
T ss_pred EEEEECCCceeEEEEEEEcC----CCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEE
Confidence 99999999888888888763 33332 2234567889999999999999999999999999988643 233
Q ss_pred EeCCEEEEEEcc-cCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 161 SEKNTHTLTLIQ-CSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 161 ~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
......+|.|.+ +..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 155 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 155 VTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp ECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 445677999999 99999999999999999999888888885
No 107
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.93 E-value=1.1e-25 Score=234.31 Aligned_cols=283 Identities=14% Similarity=0.156 Sum_probs=170.7
Q ss_pred CCCeEEecCCcEEEEEEEeCC---CceEEEEEC--CEEcc-----------------cCCCEEEEEe--CcEEEEEEccC
Q psy2775 422 LQDVKVSRDEKASFEIELTKG---DALVKWYKD--GKEIA-----------------FSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
+....+.+|++++|.|.+.+. .+.+.|+|+ +..+. ...++.+..+ +....|+|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (344)
T 1za6_B 7 SGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSL 86 (344)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCC
Confidence 345678899999999999873 568999996 33221 1356666654 35678999999
Q ss_pred CCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCC
Q psy2775 478 GLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPG 556 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 556 (785)
+.+|+|.|+|.|.|. +.....+.|.|...+.
T Consensus 87 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~------------------------------------------------ 118 (344)
T 1za6_B 87 RSEDTAVYFCTRSLNMAYWGQGTLVTVSSAST------------------------------------------------ 118 (344)
T ss_dssp CGGGCEEEEEEETTTTCEECCCEEEEECSSCC------------------------------------------------
T ss_pred CcccCEEEEEEEecCcceecCcEEEEEecCCC------------------------------------------------
Confidence 999999999999995 4444567788874210
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecC-CC-CceEEEeCCEEecCCCCeeEEeeCC----eEEEEEccCCCCCCceeE
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKAS-PA-PSIVWFRNNKPLLSSPKKREIFDGE----NIILELKEADSETDAGDY 630 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~-p~v~W~~~~~~i~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~Y 630 (785)
.+|.+........+.+|+.++|.|.+.|. |. |.|+|+|+|..+...........++ ...|.|.++.. +| |.|
T Consensus 119 ~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d-G~Y 196 (344)
T 1za6_B 119 KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL-GT-QTY 196 (344)
T ss_dssp BCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHH-HH-BCE
T ss_pred CCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHc-CC-CcE
Confidence 01333322223356789999999999997 65 6999999997642110000111111 24799999887 77 999
Q ss_pred EEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCC
Q psy2775 631 KVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGE 710 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~ 710 (785)
+|.|.|..|.......+.+.+..-. .....+.++ ..+........+|.+....+... ...|+
T Consensus 197 ~C~a~n~~~~~~~~~~~~~~v~~~~-~~~~~~~~~----------------~~l~~~~~~~~~P~v~~~~~~~~-~~~~~ 258 (344)
T 1za6_B 197 ICNVNHKPSNTKVDKKVEPKSCDKT-HTCPPCGGG----------------SSGGGSGGQPREPQVYTLPPSRD-ELTKN 258 (344)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC-------------------------------------CCBCCEEEEECCCGG-GGGSS
T ss_pred EEEEEeCCCCccceEeecccccccc-cccCCCCCC----------------ccccccCCCCcCCEEEEeCCChH-hccCC
Confidence 9999999987655444432110000 000000000 00000001224555443222222 22466
Q ss_pred eEEEEEEEecC-C-CCceEEeECCEEeeecccccc--chh----hhcccccceeeeeeceEEEEEEeccc
Q psy2775 711 DLKIEVRFKAL-P-PPKAEWTVNGTVIVPSKRVKG--KAE----FIKKLDDLEVKERENAVLEVEVTSDK 772 (785)
Q Consensus 711 ~~~l~C~~~g~-P-~p~i~W~~~~~~~~~~~~~~~--~~~----~~~~l~~~~v~~~~~~~~~c~~~~~~ 772 (785)
.++|.|.+.|+ | .+.|+|++||..+........ ..+ ....|.+......|.|.|+|.+.++.
T Consensus 259 ~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~ 328 (344)
T 1za6_B 259 QVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 328 (344)
T ss_dssp SEEEEEEEEEEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTT
T ss_pred cEEEEEEEeeEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCC
Confidence 69999999996 4 358999999998865443222 111 11223333333345899999999744
No 108
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.93 E-value=5.8e-24 Score=202.16 Aligned_cols=187 Identities=24% Similarity=0.441 Sum_probs=157.6
Q ss_pred ccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 8 LEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 8 ~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
+.+.||.|...+..+.+.+|++++|.|.+.+.|.+.+.|++++..+....+..+...+.. .+|+|.+++.+|+|.|
T Consensus 3 ~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y 78 (197)
T 3lcy_A 3 MSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRT----HTLTVMTEEQEDEGVY 78 (197)
T ss_dssp CCCEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSE----EEEEEECCSGGGCEEE
T ss_pred ccCCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCE----EEEEEecCCccCCEEE
Confidence 567899999999999999999999999999999999999999999988888777665532 4699999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEeCCCCCCCceec---CCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEEE
Q psy2775 88 TVVAKNREGEAKMDIPVKVNTGKPEKPSILE---PLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QITS 161 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~---~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~~ 161 (785)
+|.+.|..+.......|.|.. +|.+.. ......+..|+.+.|.|.+.|.|.+.+.|+++|..+... ....
T Consensus 79 ~C~~~n~~~~~~~~~~l~v~~----~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~ 154 (197)
T 3lcy_A 79 TCIATNEVGEVETSSKLLLQA----TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIEN 154 (197)
T ss_dssp EEEEECSSCEEEEEEEEEEEE----EEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEE
T ss_pred EEEEECCCCceeEEEEEEEEc----CCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEE
Confidence 999999998888888887763 333332 224567789999999999999999999999999998654 2333
Q ss_pred eCCEEEEEEcccCC-CCcEEEEEEEEcCCeeEEEEEEEEeec
Q psy2775 162 EKNTHTLTLIQCST-KDKGRYSVKVTNKEGTVESAANLNVDP 202 (785)
Q Consensus 162 ~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 202 (785)
.....+|.|.++.. +|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 155 ~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 155 TEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp CSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 44457899999984 899999999999999999889888863
No 109
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.92 E-value=1.1e-23 Score=202.73 Aligned_cols=192 Identities=23% Similarity=0.346 Sum_probs=151.8
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEe-CcEEEEEEccC-CCCCcEEEEEEEe
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSID-GKKQKLIIFSA-GLEDAGEYSCRVG 490 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~-~~~~~L~i~~~-~~~d~G~Y~C~a~ 490 (785)
.||.+...+.+..+.+|+.+.|.|.+.+ +.+.+.|++++..+........... +....|.|.++ +.+|+|.|+|.|.
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~ 84 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVAS 84 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEE
Confidence 4677777788889999999999999997 7789999999999865543333332 35678999999 5999999999999
Q ss_pred ec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeee
Q psy2775 491 DT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKT 569 (785)
Q Consensus 491 n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 569 (785)
|. |....++.|.|..++.. + ...|.+...+....
T Consensus 85 n~~g~~~~~~~l~V~~~~~~-----~----------------------------------------~~~p~~~~~~~~~~ 119 (212)
T 2yd6_A 85 NNVGEISVSTRLTVLREDQI-----P----------------------------------------RGFPTIDMGPQLKV 119 (212)
T ss_dssp ETTEEEEEEEEEEEECGGGC-----C----------------------------------------TTCCEEEECCCCEE
T ss_pred cCCCcEEEEEEEEEeccCcc-----C----------------------------------------CCcceeecCCccee
Confidence 97 77777888888765310 0 01255555556678
Q ss_pred eeecCeEEEEEEEecCCCCceEEEeCCEEecCC---CCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEE-E
Q psy2775 570 VKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSS---PKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHG-A 645 (785)
Q Consensus 570 v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~---~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~-~ 645 (785)
+.+|+.++|.|.+.|+|.|.|.|+|+|..+... .+......+....|.|.++.. +|+|.|+|.|.|..|...++ +
T Consensus 120 ~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~G~~~s~~a 198 (212)
T 2yd6_A 120 VERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEE-SDQGKYECVATNSAGTRYSAPA 198 (212)
T ss_dssp EETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCG-GGCEEEEEEEEETTEEEECCCE
T ss_pred EecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCc-ccCEEEEEEEECCCCccccccc
Confidence 899999999999999999999999999998764 344455556678999999999 99999999999999997654 7
Q ss_pred EEEEEe
Q psy2775 646 RVTVDV 651 (785)
Q Consensus 646 ~l~V~~ 651 (785)
.|.|.+
T Consensus 199 ~l~~~~ 204 (212)
T 2yd6_A 199 NLYVRG 204 (212)
T ss_dssp EEEEEC
T ss_pred cEEEEe
Confidence 777763
No 110
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.92 E-value=1e-23 Score=202.94 Aligned_cols=189 Identities=24% Similarity=0.377 Sum_probs=153.7
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcc-cCCCEEEEEe-CcEEEEEEccCCC-CCcEEEEEEE
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIA-FSENVTLSID-GKKQKLIIFSAGL-EDAGEYSCRV 489 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~-~~~~~~~~~~-~~~~~L~i~~~~~-~d~G~Y~C~a 489 (785)
.||.+...+.+..+.+|+.++|.|.+.+ +.+.+.|++++..+. ...++.+... +....|.|.++.. +|+|.|+|.|
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 4788888888999999999999999997 677999999999986 4456665543 4558999999999 9999999999
Q ss_pred eec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeee
Q psy2775 490 GDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEE 567 (785)
Q Consensus 490 ~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~ 567 (785)
.|. |. ....+.|.|..++.. +..+|.+...+..
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~~---------------------------------------------~~~~p~~~~~~~~ 119 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDKT---------------------------------------------PAGFPVITQGPGT 119 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTCS---------------------------------------------CTTCCEEEECCCC
T ss_pred EeCCCCeEEeeEEEEEecccCC---------------------------------------------CCCCCeeEeCCCc
Confidence 997 66 677788888865311 0012566666667
Q ss_pred eeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEE-EE
Q psy2775 568 KTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHG-AR 646 (785)
Q Consensus 568 ~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~-~~ 646 (785)
..+.+|+.++|.|.+.|+|.|.|.|++++..+.......... ++ +|.|.++.. +|+|.|+|.|.|..|...+. +.
T Consensus 120 ~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~-~~--~L~i~~v~~-~d~G~Y~C~a~N~~G~~~s~~~~ 195 (212)
T 2yd1_A 120 RVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK-DG--FLQIENSRE-EDQGKYECVAENSMGTEHSKATN 195 (212)
T ss_dssp EEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEE-TT--EEEECSCCG-GGCEEEEEEEEETTEEEECCCEE
T ss_pred eEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEcc-CC--eEEEccCCh-hhCEEEEEEeecCCCceeEEEEE
Confidence 788999999999999999999999999999987644333322 22 799999999 99999999999999998875 78
Q ss_pred EEEEe
Q psy2775 647 VTVDV 651 (785)
Q Consensus 647 l~V~~ 651 (785)
|.|+.
T Consensus 196 l~V~~ 200 (212)
T 2yd1_A 196 LYVKV 200 (212)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88873
No 111
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.92 E-value=1e-23 Score=199.95 Aligned_cols=181 Identities=19% Similarity=0.285 Sum_probs=150.1
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEE-ecCCCeeEEEECCEEccCCC--CEEEeecCC-ccce--EEEEEEcccCCCCCe
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLV-AVPEPDLLWYYNGEPLQETD--EVVFSDQSD-MHSY--VSIVTIKSIKKREEG 85 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~-g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~-~~~~--~~~L~i~~~~~~D~G 85 (785)
||+|...|..+.+.+|++++|.|.+. |.|.+.+.|++++..+.... +..+....+ ...+ .++|+|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 79999999999999999999999998 99999999999999987763 333333332 1122 467999999999999
Q ss_pred EEEEEEEcCCeeEEEE-eeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCC-eEEEeECCEEcccceEEEeC
Q psy2775 86 VYTVVAKNREGEAKMD-IPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSP-KVEWYKDGKLIKDRQITSEK 163 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~~-~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~-~v~W~~~g~~~~~~~~~~~~ 163 (785)
.|+|.|.+..+..... +.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+ .+.|+++|..+...... .
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~--~ 155 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLE----GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH--G 155 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC----CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS--S
T ss_pred EEEEEEEeCCCceecccEEEEEe----cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc--C
Confidence 9999999988765443 677776 56888877778899999999999999999999 99999999987654221 3
Q ss_pred CEEEEEEcccCCCCcEEEEEEEEcCCeeEE-EEEEEEe
Q psy2775 164 NTHTLTLIQCSTKDKGRYSVKVTNKEGTVE-SAANLNV 200 (785)
Q Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 200 (785)
...+|.|.+++ |+|.|+|.|.|..|... ..+.|.|
T Consensus 156 ~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 156 PQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp CCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 56689999887 89999999999999886 5788888
No 112
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.92 E-value=8e-25 Score=206.91 Aligned_cols=167 Identities=16% Similarity=0.182 Sum_probs=128.5
Q ss_pred CeEEecCCcEEEEEEEe---C-CCceEEEEECCEEcc-----------------cCCCEEEEEeCcEEEEEEccCCCCCc
Q psy2775 424 DVKVSRDEKASFEIELT---K-GDALVKWYKDGKEIA-----------------FSENVTLSIDGKKQKLIIFSAGLEDA 482 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~---~-~~~~i~W~~~~~~~~-----------------~~~~~~~~~~~~~~~L~i~~~~~~d~ 482 (785)
.+.+..|++++|.|.+. + |.+.|+|+|+|..+. ....+.+..+.+...|.|.+++.+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 46788999999999653 3 678999999764321 12345556667778999999999999
Q ss_pred EEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeE
Q psy2775 483 GEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLF 561 (785)
Q Consensus 483 G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~ 561 (785)
|.|+|.|.|. |.....+.|.|..| |.+
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p----------------------------------------------------~~~ 109 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKP----------------------------------------------------LTL 109 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEE----------------------------------------------------EEE
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCC----------------------------------------------------cee
Confidence 9999999997 77788888888764 555
Q ss_pred eeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecC----CCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 562 IERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLS----SPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 562 ~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~----~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
...+....+.+|++++|.|.+.|+|.|.|+|++++..+.. +.+..+..++....|.|.++.. +|+|.|+|.|+|.
T Consensus 110 ~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~-~D~G~YtC~A~N~ 188 (203)
T 4fa8_A 110 SVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPK-PWHLPVTCVGKND 188 (203)
T ss_dssp EEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTSCEEEEEEEEECS-SCCCCEEEEEESS
T ss_pred eecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCH-HHCEEEEEEEEcC
Confidence 6666678899999999999999999999999987755432 2333333444455677889998 9999999999999
Q ss_pred CcceEE
Q psy2775 638 LGSATH 643 (785)
Q Consensus 638 ~g~~~~ 643 (785)
+|++..
T Consensus 189 ~G~a~~ 194 (203)
T 4fa8_A 189 KEEAHG 194 (203)
T ss_dssp SCEEEE
T ss_pred CCEEEE
Confidence 998875
No 113
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.92 E-value=1.8e-23 Score=195.78 Aligned_cols=177 Identities=16% Similarity=0.324 Sum_probs=145.3
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVA 91 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 91 (785)
+|.|...|..+.+.+|++++|.|.+.+.|.+.+.|++++..+....+..+....+ ...+.|.|.+++.+|+|.|+|.+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~ 79 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQ--HWIGFLSLKSVERSDAGRYWCQV 79 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETT--EEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCC--CceEEEEEeecCcccCeEEEEEE
Confidence 6889999999999999999999999998999999999999988776655554442 23467999999999999999999
Q ss_pred EcCCee-EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCC-eEEEeECCEEcccceEEEeCCEEEEE
Q psy2775 92 KNREGE-AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSP-KVEWYKDGKLIKDRQITSEKNTHTLT 169 (785)
Q Consensus 92 ~~~~~~-~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~L~ 169 (785)
.+..+. ....+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+ .+.|+++|..+..... ...+|.
T Consensus 80 ~~~~~~~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~----~~~~L~ 151 (182)
T 1rhf_A 80 EDGGETEISQPVWLTVE----GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP----SPSVLN 151 (182)
T ss_dssp SSCTTCEECCCEEEEEE----CSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE----SSEEEE
T ss_pred EcCCCcEEEEEEEEEEe----cCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC----CceEEE
Confidence 998664 4456778887 57888887788889999999999999999998 9999999998865432 456899
Q ss_pred EcccCCCCcEEEEEEEEcCCeeEEE-EEEEEe
Q psy2775 170 LIQCSTKDKGRYSVKVTNKEGTVES-AANLNV 200 (785)
Q Consensus 170 i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V 200 (785)
|.++ +|+|.|+|.|.|..|...+ .+.|.|
T Consensus 152 i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 152 VTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp ECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred Eecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 9987 5899999999999998764 677776
No 114
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.92 E-value=6.2e-23 Score=193.63 Aligned_cols=176 Identities=23% Similarity=0.320 Sum_probs=146.4
Q ss_pred CCCeeeecCCceEecC-CCeEEEEEEEEecCC--CeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 11 IPPTFSKKTKPVYAEE-NSEVTLEVRLVAVPE--PDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~-G~~v~l~C~~~g~p~--~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
.||.|... ....+.+ |++++|.|.+.+.|. +.+.|++++..+....... ....|+|.+++.+|+|.|
T Consensus 2 ~~P~i~~~-~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~---------~~~~L~i~~~~~~d~G~Y 71 (190)
T 2wv3_A 2 NEPRIVTS-EEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA---------SNMEYRINKPRAEDSGEY 71 (190)
T ss_dssp -CCEEEEC-CCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC---------SEEEEEESSCCGGGCEEE
T ss_pred CCCccccc-ceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe---------ccEEEEEecCCcccCEEE
Confidence 47888874 4566666 999999999998887 8899999999886653321 225699999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeE--CCEEccc----c--eE
Q psy2775 88 TVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYK--DGKLIKD----R--QI 159 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~--~g~~~~~----~--~~ 159 (785)
+|.|.|. +.....+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+.. . .+
T Consensus 72 ~C~~~n~-~~~~~~~~l~V~----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~ 146 (190)
T 2wv3_A 72 HCVYHFV-SAPKANATIEVK----AAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFI 146 (190)
T ss_dssp EEEEEET-TEEEEEEEEEEE----CCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEE
T ss_pred EEEEEeC-CcccccEEEEEe----cCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEE
Confidence 9999998 888888888887 57888877778889999999999999999999999999 7877631 1 23
Q ss_pred EEeCCEEEEEEcccC-CCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 160 TSEKNTHTLTLIQCS-TKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 160 ~~~~~~~~L~i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
.......+|.|.++. .+|+|.|+|.|.|..|....++.|.|.
T Consensus 147 ~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 147 INKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 334455689999999 699999999999999999988888875
No 115
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.92 E-value=1.1e-24 Score=224.72 Aligned_cols=250 Identities=15% Similarity=0.182 Sum_probs=162.7
Q ss_pred ccEEEEEEEcC--C-CCeEEEEECCEEcCCCCcE--EEEEcCc---EEEEEEcCCCCCCceEEEEEEeccceEEEEEEEe
Q psy2775 342 ENAVLEVEVTS--D-KADVKWFKDGQEIKTSKKV--TIEKKGT---IRKLLIRNISVHDEGEYTCSLPDQETSAELNVVE 413 (785)
Q Consensus 342 ~~~~l~C~~~~--~-~~~v~W~~~~~~l~~~~~~--~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~~~~~~~v~~ 413 (785)
+.+.|.|.+.+ | .+.++|+++|..+...... ....++. .+.|.|.+...+|+|.|+|.|.|..+.....+..
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 69999999987 2 3689999999998754321 1222332 2357788877789999999999987766554421
Q ss_pred -------cCCcccccCCCeEEecCCcEEEEEEEeC--CCc---eEEEEECC-EEcccCCCEEEEE-eC---cEEEEEEcc
Q psy2775 414 -------LPPEISVPLQDVKVSRDEKASFEIELTK--GDA---LVKWYKDG-KEIAFSENVTLSI-DG---KKQKLIIFS 476 (785)
Q Consensus 414 -------~~~~~~~~~~~~~v~~g~~~~l~C~~~~--~~~---~i~W~~~~-~~~~~~~~~~~~~-~~---~~~~L~i~~ 476 (785)
.|+.+..++....+.+|+.++|.|.+.+ |.+ .|.|++++ ..+.......... ++ ..+.|+|.+
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~ 184 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGT 184 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCH
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECH
Confidence 1222233344445678999999999987 344 89999975 4443222211101 11 235799999
Q ss_pred CCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 477 AGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 477 ~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
++.+|+|.|+|.|.|. +.. ...+.|..... ...
T Consensus 185 ~~~~D~G~Y~C~a~n~~~~~--~~~~~v~~~~~--~~~------------------------------------------ 218 (323)
T 2wqr_A 185 RDWIEGETYQCRVTHPHLPR--ALMRSTTKTSG--PRA------------------------------------------ 218 (323)
T ss_dssp HHHHTTCCEEEEEECTTSSS--CEEEEECCCCS--CCB------------------------------------------
T ss_pred HHccCCCCEEEEEECCCCCC--CeeeEEEccCC--CCC------------------------------------------
Confidence 9999999999999996 332 23444432100 000
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCe---eEEeeCC----eEEEEEccCCCCCC
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKK---REIFDGE----NIILELKEADSETD 626 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~---~~~~~~~----~~~L~i~~~~~~~d 626 (785)
+|.+...........|+.++|.|.+.|. |++ .|+|+|||..+..+... .....++ .++|.|..+.. +|
T Consensus 219 --~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d 295 (323)
T 2wqr_A 219 --APEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEW-EQ 295 (323)
T ss_dssp --CCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHH-HH
T ss_pred --CCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHc-cC
Confidence 1333322222222339999999999995 544 79999999988643210 0111121 35799999988 99
Q ss_pred ceeEEEEEEcCCcc
Q psy2775 627 AGDYKVVATNELGS 640 (785)
Q Consensus 627 ~G~Y~C~a~n~~g~ 640 (785)
+|.|+|.|.|..+.
T Consensus 296 ~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 296 KDEFICRAVHEAAS 309 (323)
T ss_dssp CCCEEEEEECTTST
T ss_pred CCEEEEEEEeCCCC
Confidence 99999999999886
No 116
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=4.1e-24 Score=202.23 Aligned_cols=183 Identities=24% Similarity=0.396 Sum_probs=150.9
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC-CCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE-TDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
..||.|...+..+.+.+|++++|.|.+.|.|.+.+.|++++..+.. ..++.+...+ .+|+|.+++.+|+|.|+
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~ 78 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG------QLLTILSVEDSDDGIYC 78 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG------TEEEESSCCGGGCEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc------cEEEEcCCCcccCeEEE
Confidence 4578999999999999999999999999999999999999998865 3455544333 24999999999999999
Q ss_pred EEEEcCCee-EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEE
Q psy2775 89 VVAKNREGE-AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHT 167 (785)
Q Consensus 89 C~a~~~~~~-~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 167 (785)
|.+.|..+. ......|.|. .+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+............+
T Consensus 79 C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~ 154 (192)
T 2iep_A 79 CTANNGVGGAVESCGALQVK----MKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESGS 154 (192)
T ss_dssp EEEECSSSCCEEEEEEEEEE----EEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTTSC
T ss_pred EEEEcCCCceeEeEEEEEEE----eCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecCCc
Confidence 999998776 4555667776 46777777778889999999999999999999999999999887653322223347
Q ss_pred EEEcccCCCCcEEEEEEEEcCCeeEEE-EEEEEeec
Q psy2775 168 LTLIQCSTKDKGRYSVKVTNKEGTVES-AANLNVDP 202 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~ 202 (785)
|.|.++..+|+|.|+|.|.|..|...+ .+.|.|..
T Consensus 155 L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 155 LRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEe
Confidence 999999999999999999999998744 57787763
No 117
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.91 E-value=2.1e-23 Score=196.78 Aligned_cols=176 Identities=23% Similarity=0.435 Sum_probs=140.7
Q ss_pred cccCCCeEEecCCcEEEEEEEeCCCceEEEEE-CCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-Ccc-
Q psy2775 419 SVPLQDVKVSRDEKASFEIELTKGDALVKWYK-DGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDK- 495 (785)
Q Consensus 419 ~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~- 495 (785)
..++.+..+.+|+.++|.|.+.+.+..+.|++ ++..+....++.+..++..+.|.|.+++.+|+|.|+|.|.|. |..
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~~~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~ 85 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQ 85 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEEECCSEEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEE
T ss_pred EecCCceEEecCCcEEEEEEeecCCeeEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcE
Confidence 34556778999999999999988555999999 788888888888888888889999999999999999999997 544
Q ss_pred eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCe
Q psy2775 496 ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGT 575 (785)
Q Consensus 496 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~ 575 (785)
...+.|.|..+ |.+...+....+.+|+.
T Consensus 86 ~~~~~l~v~~~----------------------------------------------------p~~~~~~~~~~~~~g~~ 113 (189)
T 2v44_A 86 EATVVLEIYQK----------------------------------------------------LTFREVVSPQEFKQGED 113 (189)
T ss_dssp EEEEEEEEECC----------------------------------------------------CEEESCCCSEEEETTSC
T ss_pred EEEEEEEEecC----------------------------------------------------CceeecCCcEEEeCCCC
Confidence 55677777765 33333334567889999
Q ss_pred EEEEEEEecCCCCceEEEeCCEEecC--CCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 576 IRLMAKVKASPAPSIVWFRNNKPLLS--SPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 576 v~l~C~~~g~P~p~v~W~~~~~~i~~--~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
++|.|.+.|+|.|.+.|+|++..+.. +.++... . ...|.|.++.. +|+|.|+|.|.|..|.......+.|.
T Consensus 114 ~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~-~--~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 114 AEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAML-A--NNNLQILNINK-SDEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp EEECCEEECSSCCEEEEEEEC--CEECCCTTEEEC-T--TSCEEETTCCG-GGCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred EEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEe-c--CCcEEEEEcCc-ccCeEEEEEEEccccCceeeeeEEEE
Confidence 99999999999999999999998863 3333222 2 23699999999 99999999999999887766666665
No 118
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.91 E-value=3.1e-23 Score=199.70 Aligned_cols=187 Identities=22% Similarity=0.363 Sum_probs=145.2
Q ss_pred cCCcEEEEEEEeC--CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEc
Q psy2775 429 RDEKASFEIELTK--GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEA 505 (785)
Q Consensus 429 ~g~~~~l~C~~~~--~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~ 505 (785)
.++.+.|.|.+.+ +.+.+.|+++|..+..+.++.+..++....|.|.+++.+|+|.|+|.|.|. |....++.|.|..
T Consensus 16 ~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~ 95 (212)
T 2r15_A 16 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQA 95 (212)
T ss_dssp CSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHH
T ss_pred cCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEee
Confidence 5778899999887 478899999999999888999888888889999999999999999999997 6555555555442
Q ss_pred Ccccccc----cCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEE
Q psy2775 506 PAVEFLT----KLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAK 581 (785)
Q Consensus 506 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~ 581 (785)
....... ..+... ....++.+...+....+.+|+.++|.|.
T Consensus 96 ~~~~~~~~~~~~~~~~~-----------------------------------~~~~p~~~~~~~~~~~v~~g~~~~l~C~ 140 (212)
T 2r15_A 96 YDEAYAEFQRLKQAAIA-----------------------------------EKNRARVLGGLPDVVTIQEGKALNLTCN 140 (212)
T ss_dssp HHHHHHHHHHHHHHHHH-----------------------------------HHHSCEEEEBCCSEEEEETTCCEEEEEE
T ss_pred ccchhhhccccCccccc-----------------------------------ccCCCcccccCCCcEEEccCCeEEEEEE
Confidence 1000000 000000 0000122333345678999999999999
Q ss_pred EecCCCCceEEEeCCEEecCCCCeeEEee-CCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 582 VKASPAPSIVWFRNNKPLLSSPKKREIFD-GENIILELKEADSETDAGDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 582 ~~g~P~p~v~W~~~~~~i~~~~~~~~~~~-~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
+.|+|.|.+.|+|++..+..+.++.+... +...+|.|.++.. +|+|.|+|.|.|..|....++.|.|.+
T Consensus 141 ~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 141 VWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVST-ADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCG-GGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcch-HHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 99999999999999999988887766665 6678999999999 999999999999999999988888863
No 119
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.91 E-value=8.4e-23 Score=193.17 Aligned_cols=179 Identities=23% Similarity=0.483 Sum_probs=148.1
Q ss_pred CCeeeecCC--ceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 12 PPTFSKKTK--PVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 12 ~p~~~~~~~--~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
||.|...+. .+.+.+|++++|.|.+.|.|.+.+.|++++..+....++.+.... +.|+|.+++.+|+|.|+|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~------~~L~i~~~~~~d~G~Y~C 75 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN------TELTVRNIINSDGGPYVC 75 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTT------TEEEECSCCGGGCEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCe------eEEEEecCChhcCcEEEE
Confidence 788876544 688999999999999999999999999999999887777664433 249999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeEC--CEEcccc--------eE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKD--GKLIKDR--------QI 159 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~--g~~~~~~--------~~ 159 (785)
.+.+..+.....+.|.|. .+|.+... ....+..|+.+.|.|.+.|.|.+.+.|+++ +..+... ..
T Consensus 76 ~~~~~~~~~~~~~~l~V~----~~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~ 150 (192)
T 2va4_A 76 RATNKAGEDEKQAFLQVF----VQPHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEV 150 (192)
T ss_dssp EEEETTEEEEEEEEEEEE----EEEEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEE
T ss_pred EEEccccccceEEEEEEE----ccCccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEE
Confidence 999999888888888886 45665544 345677899999999999999999999998 6655431 22
Q ss_pred EEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 160 TSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 160 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
.......+|.|.++..+|+|.|+|.|.|..|..+.++.|.|.
T Consensus 151 ~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 151 KGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp EEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred eeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 334456789999999999999999999999998888888873
No 120
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.91 E-value=4.3e-23 Score=195.66 Aligned_cols=175 Identities=22% Similarity=0.402 Sum_probs=141.4
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEe-C-CCceEEEEECCEEcccCC--CEEEEEeCc-------EEEEEEccCCCCCcE
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELT-K-GDALVKWYKDGKEIAFSE--NVTLSIDGK-------KQKLIIFSAGLEDAG 483 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~-~-~~~~i~W~~~~~~~~~~~--~~~~~~~~~-------~~~L~i~~~~~~d~G 483 (785)
+|.+...+.+..+.+|+.++|.|.+. + +.+.+.|++++..+.... +..+..... ...|.|.+++.+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 56777788899999999999999999 5 678899999999987663 333333322 468999999999999
Q ss_pred EEEEEEeec-Ccce-eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeE
Q psy2775 484 EYSCRVGDT-GDKE-SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLF 561 (785)
Q Consensus 484 ~Y~C~a~n~-g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~ 561 (785)
.|+|.|.|. |... ..+.|.|..+ |.+
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~~~----------------------------------------------------p~~ 109 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLEGL----------------------------------------------------PYF 109 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEECCS----------------------------------------------------CEE
T ss_pred EEEEEEEeCCCceecccEEEEEecC----------------------------------------------------CeE
Confidence 999999997 4332 3377777665 445
Q ss_pred eeeeeeeeeeecCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcc
Q psy2775 562 IERFEEKTVKEKGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGS 640 (785)
Q Consensus 562 ~~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~ 640 (785)
...+....+.+|+.++|.|.+.|+|.| .|.|+|++..+...... ....+|.|.++ .|+|.|+|.|.|..|.
T Consensus 110 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~---~d~G~Y~C~a~N~~g~ 181 (195)
T 2c5d_C 110 LEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGL---NKTSSFSCEAHNAKGV 181 (195)
T ss_dssp EECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCC---SSCEEEEEEEEETTEE
T ss_pred EcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEccc---ccCceEEEEEEcCCCc
Confidence 555556788999999999999999999 99999999988765442 45678999987 4789999999999998
Q ss_pred eE-EEEEEEE
Q psy2775 641 AT-HGARVTV 649 (785)
Q Consensus 641 ~~-~~~~l~V 649 (785)
.. .++.|.|
T Consensus 182 ~~s~~~~l~V 191 (195)
T 2c5d_C 182 TTSRTATITV 191 (195)
T ss_dssp EECCCEEEEE
T ss_pred eEEEEEEEEE
Confidence 86 6888887
No 121
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.91 E-value=7.9e-23 Score=191.46 Aligned_cols=174 Identities=21% Similarity=0.338 Sum_probs=139.0
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCc--EEEEEEccCCCCCcEEEEEEEee
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGK--KQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
++.+...+.+..+.+|+.++|.|.+.+ +.+.+.|++++..+....+..+..++. ...|.|.+++.+|+|.|+|.|.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 355666777888999999999999998 678899999999987776665555443 46899999999999999999999
Q ss_pred c-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeee
Q psy2775 492 T-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKT 569 (785)
Q Consensus 492 ~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 569 (785)
. |. ....+.|.|..+ |.+...+....
T Consensus 82 ~~~~~~~~~~~l~V~~~----------------------------------------------------p~~~~~~~~~~ 109 (182)
T 1rhf_A 82 GGETEISQPVWLTVEGV----------------------------------------------------PFFTVEPKDLA 109 (182)
T ss_dssp CTTCEECCCEEEEEECS----------------------------------------------------CEEEECCCCEE
T ss_pred CCCcEEEEEEEEEEecC----------------------------------------------------CeEEecCcceE
Confidence 7 43 445788888765 44444455678
Q ss_pred eeecCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEE-EEEE
Q psy2775 570 VKEKGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATH-GARV 647 (785)
Q Consensus 570 v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l 647 (785)
+.+|+.++|.|.+.|+|.| .+.|++++..+..... ...+|.|.++ +|+|.|+|.|.|..|...+ ++.|
T Consensus 110 ~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~~---~d~G~Y~C~a~N~~g~~~s~~~~l 179 (182)
T 1rhf_A 110 VPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTGV---TQSTMFSCEAHNLKGLASSRTATV 179 (182)
T ss_dssp ECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-------SSEEEEECCC---SSCEEEEEEEEETTEEEECCCEEE
T ss_pred ecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-------CceEEEEecc---ccCeEEEEEEECCCCCcccceEEE
Confidence 8999999999999999999 9999999998854321 5677999987 6899999999999998864 7777
Q ss_pred EEE
Q psy2775 648 TVD 650 (785)
Q Consensus 648 ~V~ 650 (785)
.|+
T Consensus 180 ~Vk 182 (182)
T 1rhf_A 180 HLQ 182 (182)
T ss_dssp EEC
T ss_pred EeC
Confidence 763
No 122
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.90 E-value=1e-22 Score=192.67 Aligned_cols=180 Identities=23% Similarity=0.432 Sum_probs=143.3
Q ss_pred CCcccccCC--CeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEee
Q psy2775 415 PPEISVPLQ--DVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 415 ~~~~~~~~~--~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
||.+..... +..+.+|+.++|.|.+.+ +.+.+.|++++..+....++.+..++ ..|.|.+++.+|+|.|+|.|.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTT--TEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCe--eEEEEecCChhcCcEEEEEEEc
Confidence 556655443 466789999999999987 67889999999999877776654333 4799999999999999999999
Q ss_pred c-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeee
Q psy2775 492 T-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTV 570 (785)
Q Consensus 492 ~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 570 (785)
. |.....+.|.|..+| .+.. .....+
T Consensus 80 ~~~~~~~~~~l~V~~~p----------------------------------------------------~~~~-~~~~~~ 106 (192)
T 2va4_A 80 KAGEDEKQAFLQVFVQP----------------------------------------------------HIIQ-LKNETT 106 (192)
T ss_dssp TTEEEEEEEEEEEEEEE----------------------------------------------------EEEE-ECCEEE
T ss_pred cccccceEEEEEEEccC----------------------------------------------------cccc-cCcceE
Confidence 7 666677788886553 2221 123466
Q ss_pred eecCeEEEEEEEecCCCCceEEEeC--CEEecC-----CCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEE
Q psy2775 571 KEKGTIRLMAKVKASPAPSIVWFRN--NKPLLS-----SPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATH 643 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~P~p~v~W~~~--~~~i~~-----~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 643 (785)
.+|+.++|.|.+.|+|.|.+.|+|+ +..+.. ..++.........+|.|.++.. +|+|.|+|.|.|..|....
T Consensus 107 ~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~ 185 (192)
T 2va4_A 107 YENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKL-SDSGRYDCEAASRIGGHQK 185 (192)
T ss_dssp CTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCG-GGCEEEEEEEECSSCEEEE
T ss_pred EeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCc-ccCEEEEEEEEecCCceEE
Confidence 7799999999999999999999998 666654 2344455556678999999999 9999999999999999888
Q ss_pred EEEEEEE
Q psy2775 644 GARVTVD 650 (785)
Q Consensus 644 ~~~l~V~ 650 (785)
++.|.|+
T Consensus 186 ~~~l~V~ 192 (192)
T 2va4_A 186 SMYLDIE 192 (192)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 8888773
No 123
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.90 E-value=7.5e-23 Score=193.32 Aligned_cols=182 Identities=16% Similarity=0.232 Sum_probs=145.4
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecC-CCeeEEEE-CCEEcc-CCCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVP-EPDLLWYY-NGEPLQ-ETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-~~~i~W~~-~~~~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
.|+.|...|..+.+.+|++++|.|.+.+.+ .+.+.|++ ++..+. ...++.+..... ..+.|+|.+++.+|+|.|
T Consensus 1 rp~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y 77 (191)
T 1epf_A 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD---DSSTLTIYNANIDDAGIY 77 (191)
T ss_dssp --CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEET---TEEEEEECSCCGGGCEEE
T ss_pred CceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCC---CceEEEEccCCcccCEEE
Confidence 378899999999999999999999998876 78999999 887776 344554433211 225799999999999999
Q ss_pred EEEEEcCC-eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccc---eEEEeC
Q psy2775 88 TVVAKNRE-GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDR---QITSEK 163 (785)
Q Consensus 88 ~C~a~~~~-~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~---~~~~~~ 163 (785)
+|.+.+.. +.....+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+... ......
T Consensus 78 ~C~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~ 153 (191)
T 1epf_A 78 KCVVTAEDGTQSEATVNVKIF----QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS 153 (191)
T ss_dssp EEEEEETTTEEEEEEEEEEEE----CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECT
T ss_pred EEEEEcCCCcceEEEEEEEee----cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEec
Confidence 99999987 566677778876 5778877778888999999999999999999999999999988643 222222
Q ss_pred CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 164 NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
..+|.|.++..+|+|.|+|.|.|..+.......+.|
T Consensus 154 -~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 154 -NNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp -TSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEE
T ss_pred -CCeEEECCCChhhCEEEEEEEEEecceeEEEEEEEE
Confidence 237999999999999999999998865555544444
No 124
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.90 E-value=8.6e-23 Score=192.53 Aligned_cols=177 Identities=18% Similarity=0.325 Sum_probs=142.5
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecCCCeeEEEE-CCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEE
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYY-NGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAK 92 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 92 (785)
.|...|..+.+.+|++++|.|.+.|.|. .+.|++ ++..+....++.+...+.. ++|.|.+++.+|+|.|+|.+.
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C~~~ 78 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVR----SRLTIYNANIEDAGIYRCQAT 78 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTE----EEEEECSCCGGGCEEEEEEEE
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCe----EEEEEccCCcccCeEEEEEEE
Confidence 5778899999999999999999999877 899999 7777877777776655432 569999999999999999999
Q ss_pred cCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEccc---ceEEEeCCEEEE
Q psy2775 93 NREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKD---RQITSEKNTHTL 168 (785)
Q Consensus 93 ~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~---~~~~~~~~~~~L 168 (785)
+..+.. ...+.|.|. .+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+.. ....... ..+|
T Consensus 79 ~~~g~~~~~~~~l~v~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-~~~L 153 (189)
T 2v44_A 79 DAKGQTQEATVVLEIY----QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA-NNNL 153 (189)
T ss_dssp CTTSCEEEEEEEEEEE----CCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECT-TSCE
T ss_pred eCCCCcEEEEEEEEEe----cCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEec-CCcE
Confidence 988765 566777776 467777666778899999999999999999999999999988752 2222222 2379
Q ss_pred EEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 169 TLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 169 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
.|.++..+|+|.|+|.|.|..+.......+.|
T Consensus 154 ~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 154 QILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp EETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 99999999999999999999866555444444
No 125
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.90 E-value=1.1e-22 Score=192.13 Aligned_cols=182 Identities=19% Similarity=0.351 Sum_probs=140.8
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeC-C-CceEEEEE-CCEEcc-cCCCEEEEE-eCcEEEEEEccCCCCCcEEEEEEE
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTK-G-DALVKWYK-DGKEIA-FSENVTLSI-DGKKQKLIIFSAGLEDAGEYSCRV 489 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~-~~~i~W~~-~~~~~~-~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a 489 (785)
|+.+...+.+..+.+|+.++|.|.+.+ + .+.+.|++ ++..+. ...++.+.. +.....|.|.+++.+|+|.|+|.|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 455666778888999999999999998 4 67899999 888776 344555543 356789999999999999999999
Q ss_pred eec-C-cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeee
Q psy2775 490 GDT-G-DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEE 567 (785)
Q Consensus 490 ~n~-g-~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~ 567 (785)
.|. + .....+.|.|..+ |.+...+..
T Consensus 82 ~~~~~~~~~~~~~l~v~~~----------------------------------------------------p~~~~~~~~ 109 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQK----------------------------------------------------LMFKNAPTP 109 (191)
T ss_dssp EETTTEEEEEEEEEEEECC----------------------------------------------------SEEEECCSS
T ss_pred EcCCCcceEEEEEEEeecC----------------------------------------------------ceEecCCCc
Confidence 997 2 3344566666544 444444556
Q ss_pred eeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEE
Q psy2775 568 KTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARV 647 (785)
Q Consensus 568 ~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 647 (785)
..+.+|+.++|.|.+.|+|.|.+.|+|++..+............ ..+|.|.++.. +|+|.|+|.|.|..|.......+
T Consensus 110 ~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~-~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~~~~~~i 187 (191)
T 1epf_A 110 QEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLS-NNYLQIRGIKK-TDEGTYRCEGRILARGEINFKDI 187 (191)
T ss_dssp EECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECT-TSCEEETTCCG-GGCEEEEEEEEEGGGTEEEEEEE
T ss_pred EeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEec-CCeEEECCCCh-hhCEEEEEEEEEecceeEEEEEE
Confidence 77889999999999999999999999999998643322222222 22599999999 99999999999999877777776
Q ss_pred EEE
Q psy2775 648 TVD 650 (785)
Q Consensus 648 ~V~ 650 (785)
.|.
T Consensus 188 ~v~ 190 (191)
T 1epf_A 188 QVI 190 (191)
T ss_dssp EEE
T ss_pred EEe
Confidence 664
No 126
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.90 E-value=7.9e-24 Score=203.86 Aligned_cols=188 Identities=28% Similarity=0.458 Sum_probs=146.2
Q ss_pred ccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCC-----EEEeecCCccceEEEEEEcccCCC
Q psy2775 8 LEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDE-----VVFSDQSDMHSYVSIVTIKSIKKR 82 (785)
Q Consensus 8 ~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~-----~~~~~~~~~~~~~~~L~i~~~~~~ 82 (785)
....||.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+..... ......+. .....|.|.+++.+
T Consensus 5 ~~~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~~~~~~ 82 (212)
T 2v9r_A 5 QEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS--LFFLRIVHGRKSRP 82 (212)
T ss_dssp -CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSC--EEESSCCCCSSCCC
T ss_pred cccCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCc--EEEEEEEecCCCcc
Confidence 456799999999999999999999999999999999999999998754321 12222221 11223566788999
Q ss_pred CCeEEEEEEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcccce--
Q psy2775 83 EEGVYTVVAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIKDRQ-- 158 (785)
Q Consensus 83 D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~-- 158 (785)
|+|.|+|.|.|..+.. ...+.|.|.. .++.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+....
T Consensus 83 d~G~Y~C~~~n~~g~~~~~~~~l~V~~---~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~ 159 (212)
T 2v9r_A 83 DEGVYVCVARNYLGEAVSHDASLEVAI---LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDER 159 (212)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEECE---ECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTT
T ss_pred cCeEEEEEEECCCCceeecceEEEEEe---ccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcce
Confidence 9999999999988765 3455666653 34455556667889999999999998 889999999999999887532
Q ss_pred EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE-EEEEeec
Q psy2775 159 ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVDP 202 (785)
Q Consensus 159 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~ 202 (785)
..... ..|.|.++..+|+|.|+|.|.|..|...+. +.|.|..
T Consensus 160 ~~~~~--~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 160 ITIRG--GKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp EEEET--TEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred EEccC--CeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEe
Confidence 22222 379999999999999999999999987664 7888874
No 127
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.90 E-value=3.1e-23 Score=196.21 Aligned_cols=178 Identities=25% Similarity=0.403 Sum_probs=143.4
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEccc-CCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAF-SENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT 492 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 492 (785)
+|.+..++....+.+|+.++|.|.+.+ +.+.+.|++++..+.. ..++.+..++ ..|.|.+++.+|+|.|+|.+.|.
T Consensus 7 ~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~ 84 (192)
T 2iep_A 7 APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG--QLLTILSVEDSDDGIYCCTANNG 84 (192)
T ss_dssp EEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG--TEEEESSCCGGGCEEEEEEEECS
T ss_pred CceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc--cEEEEcCCCcccCeEEEEEEEcC
Confidence 566777778888999999999999987 7789999999998865 3455554443 37999999999999999999997
Q ss_pred -Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeee
Q psy2775 493 -GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTV 570 (785)
Q Consensus 493 -g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 570 (785)
|. ......|.|..+ |.+...+....+
T Consensus 85 ~~~~~~~~~~l~v~~~----------------------------------------------------p~~~~~~~~~~~ 112 (192)
T 2iep_A 85 VGGAVESCGALQVKMK----------------------------------------------------PKITRPPINVKI 112 (192)
T ss_dssp SSCCEEEEEEEEEEEE----------------------------------------------------EEEEECCCCEEE
T ss_pred CCceeEeEEEEEEEeC----------------------------------------------------CccccCCcceEE
Confidence 55 455677777764 444444446678
Q ss_pred eecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceE-EEEEEEE
Q psy2775 571 KEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSAT-HGARVTV 649 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 649 (785)
.+|+.++|.|.+.|+|.|.+.|++++..+..+.+..... ..+|.|.++.. +|+|.|+|.|.|..|... ..+.|.|
T Consensus 113 ~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~---~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V 188 (192)
T 2iep_A 113 IEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLE---SGSLRIHNVQK-EDAGQYRCVAKNSLGTAYSKLVKLEV 188 (192)
T ss_dssp ETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECT---TSCEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred eCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEec---CCcEEEecCCh-hhCEEEEEEEEcCCCcEEEEEEEEEE
Confidence 899999999999999999999999999997766543332 23699999999 999999999999999884 4577777
Q ss_pred E
Q psy2775 650 D 650 (785)
Q Consensus 650 ~ 650 (785)
+
T Consensus 189 ~ 189 (192)
T 2iep_A 189 E 189 (192)
T ss_dssp E
T ss_pred E
Confidence 6
No 128
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.90 E-value=2.5e-23 Score=196.25 Aligned_cols=180 Identities=26% Similarity=0.460 Sum_probs=140.6
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC--CCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE--TDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
.+|.|...|.++.+.+|++++|.|.+.+.|.+.+.|++++..+.. ..++.+..++ +|+|.+++.+|+|.|+
T Consensus 1 s~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~-------~L~i~~~~~~d~G~Y~ 73 (189)
T 2v5t_A 1 SMLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN-------NLQILNINKSDEGIYR 73 (189)
T ss_dssp CCCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS-------CEEETTCCGGGCEEEE
T ss_pred CCceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC-------CEEEeeCCHhHCcEEE
Confidence 379999999999999999999999999999999999999987754 3344333222 3999999999999999
Q ss_pred EEEEcCCeeE--EEEeeEEEeCCCCCCCceecCCC--ceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccce-EEEeC
Q psy2775 89 VVAKNREGEA--KMDIPVKVNTGKPEKPSILEPLH--DVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ-ITSEK 163 (785)
Q Consensus 89 C~a~~~~~~~--~~~~~v~v~~~~~~~p~i~~~~~--~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~-~~~~~ 163 (785)
|.+.+..+.. ...+.+.+. .+|.+..... ...+..|+.+.|.|.+.|.|.+.+.|+++|..+.... .....
T Consensus 74 C~~~~~~~~~~~~~~~~l~v~----~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~ 149 (189)
T 2v5t_A 74 CEGRVEARGEIDFRDIIVIVN----VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG 149 (189)
T ss_dssp EEEEETTTTEEEEEEEEEEEE----EEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEET
T ss_pred EEEEEcCCCceEEEEEEEEec----CCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEec
Confidence 9999876433 244555554 3555554433 4567889999999999999999999999999887542 33334
Q ss_pred CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 164 NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
...+|.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 150 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 150 SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEE
Confidence 45579999999999999999999999999988888875
No 129
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.90 E-value=1.9e-23 Score=202.01 Aligned_cols=188 Identities=23% Similarity=0.377 Sum_probs=145.5
Q ss_pred ccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCC--CEEEeecCCccceEEEEEEcccCCCCCe
Q psy2775 8 LEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETD--EVVFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 8 ~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
....||.|...|..+.+.+|++++|.|.+.|.|.+.|.|++++..+.... ...+...++. ....|+|.+++.+|+|
T Consensus 5 ~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~--~~~~l~i~~v~~~d~G 82 (217)
T 2vr9_A 5 GQYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGA--LFFYRTMQGKKEQDGG 82 (217)
T ss_dssp -CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSC--EEESSCCBSSSCBCCE
T ss_pred cccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCc--eEEEEEeccCCcccCc
Confidence 34679999999999999999999999999999999999999999886542 2222222221 1233578999999999
Q ss_pred EEEEEEEcCCeeEE-EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcccc------
Q psy2775 86 VYTVVAKNREGEAK-MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIKDR------ 157 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~-~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~------ 157 (785)
.|+|.+.|..+... ....|.|.. .+|.+...+....+..|+.+.|.|.+ .|.|.+.+.|+++|..+...
T Consensus 83 ~Y~C~~~n~~g~~~~~~~~l~v~~---~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~ 159 (217)
T 2vr9_A 83 EYWCVAKNRVGQAVSRHASLQIAV---LRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFG 159 (217)
T ss_dssp EEEEEEEETTEEEECCCEEEEECE---ECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---
T ss_pred eEEEEEecCCCccccccceEEEEE---eCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccc
Confidence 99999999888653 345566543 34555566667889999999999999 88999999999999988732
Q ss_pred ---eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 158 ---QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 158 ---~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
..... ...+|.|.+++.+|+|.|+|.|.|..|....+..+.+.
T Consensus 160 ~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 160 ASSRVRIV-DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp CCCSEEEE-TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCcEEec-CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 11111 22379999999999999999999999988877555443
No 130
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.89 E-value=3.1e-23 Score=195.98 Aligned_cols=167 Identities=13% Similarity=0.118 Sum_probs=125.3
Q ss_pred CceEecCCCeEEEEEE---EEecCCCeeEEEECCEEccC-----------------CCCEEEeecCCccceEEEEEEccc
Q psy2775 20 KPVYAEENSEVTLEVR---LVAVPEPDLLWYYNGEPLQE-----------------TDEVVFSDQSDMHSYVSIVTIKSI 79 (785)
Q Consensus 20 ~~~~v~~G~~v~l~C~---~~g~p~~~i~W~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~L~i~~~ 79 (785)
+.+++..|++++|.|. +.+.|.+.|.|+|++..+.. ..++.+.... ....|.|.++
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~L~I~~v 76 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSA----NTFFLVVTAA 76 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEET----TEEEEEESSC
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcC----CEEEEEEccC
Confidence 3578999999999995 46778999999997643211 1112222222 1256999999
Q ss_pred CCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEccc---
Q psy2775 80 KKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKD--- 156 (785)
Q Consensus 80 ~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~--- 156 (785)
+.+|+|.|+|.|.|..+.....+.|.|. .||.+...+....+.+|+.+.|.|.+.|.|.|.|+|++++..+..
T Consensus 77 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~----~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~ 152 (203)
T 4fa8_A 77 NISHDGNYLCRMKLGETEVTKQEHLSVV----KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTA 152 (203)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE----EEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC---------
T ss_pred CHHHCeEEEEEEEcCCCcEEEEEEEEec----CCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCccc
Confidence 9999999999999999999888889887 567777777778889999999999999999999999987654432
Q ss_pred --ceEEE--eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEE
Q psy2775 157 --RQITS--EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVES 194 (785)
Q Consensus 157 --~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 194 (785)
..+.. ++.-..|.|.+++.+|+|.|+|.|.|..|..+.
T Consensus 153 ~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 153 ANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ---CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred ccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 11111 222345667899999999999999999998764
No 131
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.89 E-value=2.1e-22 Score=189.95 Aligned_cols=179 Identities=21% Similarity=0.297 Sum_probs=135.3
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccC--CCEEEEEeCcEEEEEEccCCCCCcEEEEEEEee
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFS--ENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
+|.+...+.+..+.+|+.++|.|.+.+ +.+.+.|++++..+... .++.+..++ .|.|.+++.+|+|.|+|.|.|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEEEE
Confidence 456666778889999999999999988 67889999999887643 344433333 699999999999999999999
Q ss_pred c-Ccce--eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeee--e
Q psy2775 492 T-GDKE--SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERF--E 566 (785)
Q Consensus 492 ~-g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~--~ 566 (785)
. +... ....+.|..++ .+.... .
T Consensus 79 ~~~~~~~~~~~~l~v~~~p----------------------------------------------------~~~~~~~~~ 106 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPP----------------------------------------------------AISMPQKSF 106 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEE----------------------------------------------------EEECSCCEE
T ss_pred cCCCceEEEEEEEEecCCC----------------------------------------------------Ccccccccc
Confidence 7 4433 33455555442 111111 1
Q ss_pred eeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEE
Q psy2775 567 EKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGAR 646 (785)
Q Consensus 567 ~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 646 (785)
...+.+|+.++|.|.+.|+|.|.+.|+++|..+..+.++.. .+...+|.|.++.. +|+|.|+|.|.|..|....++.
T Consensus 107 ~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~--~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~ 183 (189)
T 2v5t_A 107 NATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL--KGSNTELTVRNIIN-SDGGPYVCRATNKAGEDEKQAF 183 (189)
T ss_dssp EEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEE--ETTTTEEEECSCCG-GGCEEEEEEEEETTEEEEEEEE
T ss_pred cccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEE--ecCCCEEEEcCCCh-hhCeeEEEEEEeCCCceeEEEE
Confidence 44678899999999999999999999999999977665433 34456799999999 9999999999999999999999
Q ss_pred EEEEe
Q psy2775 647 VTVDV 651 (785)
Q Consensus 647 l~V~~ 651 (785)
|.|.|
T Consensus 184 l~V~v 188 (189)
T 2v5t_A 184 LQVFV 188 (189)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88863
No 132
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.89 E-value=3.4e-22 Score=192.99 Aligned_cols=176 Identities=15% Similarity=0.203 Sum_probs=143.5
Q ss_pred ccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 8 LEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 8 ~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
..+..++|...|..+.+.+|++++|.|.+.+.|.+.+.|++++..+..... ++|.|.+++.+|+|.|
T Consensus 14 ~~~~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~-------------~~L~i~~v~~~d~G~Y 80 (218)
T 3k0w_A 14 LVPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNT-------------SELIFNAVHVKDAGFY 80 (218)
T ss_dssp -----CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCS-------------SEEEETTCCGGGCEEE
T ss_pred ccCCCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCC-------------CEEEEccCChhhCeEe
Confidence 356789999999999999999999999999999999999999998765421 3499999999999999
Q ss_pred EEEEEcCCeeE-EEEeeEEEeCCC-----------CCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcc
Q psy2775 88 TVVAKNREGEA-KMDIPVKVNTGK-----------PEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIK 155 (785)
Q Consensus 88 ~C~a~~~~~~~-~~~~~v~v~~~~-----------~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~ 155 (785)
+|.+.+..+.. ...+.|.|.... ..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+.
T Consensus 81 ~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~ 160 (218)
T 3k0w_A 81 VCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLT 160 (218)
T ss_dssp EEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECT
T ss_pred EEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECC
Confidence 99999987754 444667776421 123677777778889999999999999999999999999999886
Q ss_pred cceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCee-EEEEEEEEeec
Q psy2775 156 DRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGT-VESAANLNVDP 202 (785)
Q Consensus 156 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~ 202 (785)
.. ...+|.|.+++.+|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 161 ~~------~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 161 HE------TKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp TC------CSSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred CC------CCCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 54 2347999999999999999999998887 44457788864
No 133
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=5.2e-22 Score=195.37 Aligned_cols=191 Identities=21% Similarity=0.358 Sum_probs=148.5
Q ss_pred ccCCCCeeeec----CCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCE---EEeecCCccceEEEEEEcccC
Q psy2775 8 LEGIPPTFSKK----TKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEV---VFSDQSDMHSYVSIVTIKSIK 80 (785)
Q Consensus 8 ~~~~~p~~~~~----~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~i~~~~ 80 (785)
+...||.|..+ +..+.+.+|++++|.|.+.|.|.+.+.|++++..+....+. ...... .+|+|.+++
T Consensus 7 v~~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~------~~L~i~~v~ 80 (241)
T 3grw_A 7 VDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQ------WSLVMESVV 80 (241)
T ss_dssp ----CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGG------TEEEECSCC
T ss_pred ccCCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccc------eEEEEEeCC
Confidence 34568888765 45799999999999999999999999999999988654322 222211 359999999
Q ss_pred CCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceec-CCCceEeccCCcEEEEEEEeccCCCeEEEeE----CCEEcc
Q psy2775 81 KREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILE-PLHDVSITEGESAVLSVQVGGEPSPKVEWYK----DGKLIK 155 (785)
Q Consensus 81 ~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~----~g~~~~ 155 (785)
.+|+|.|+|.+.|..+.....+.|.|....+.+|.+.. .+....+..|+.+.|.|.+.|.|.+.+.|++ +|..+.
T Consensus 81 ~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~ 160 (241)
T 3grw_A 81 PSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVG 160 (241)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSC
T ss_pred cccCEEEEEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccC
Confidence 99999999999999998888888888765555555443 4567788899999999999999999999999 787765
Q ss_pred cceE---E--------EeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCC
Q psy2775 156 DRQI---T--------SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYE 204 (785)
Q Consensus 156 ~~~~---~--------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 204 (785)
.... . ......+|.|.++..+|+|.|+|.|.|..|..+..+.|.|...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p 220 (241)
T 3grw_A 161 PDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPR 220 (241)
T ss_dssp TTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEC----
T ss_pred CCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEEEEEEEecCCC
Confidence 4311 0 11235679999999999999999999999999999999997543
No 134
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.89 E-value=4.3e-22 Score=194.54 Aligned_cols=191 Identities=20% Similarity=0.339 Sum_probs=151.5
Q ss_pred ccCCCCeeeecC----CceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCE---EEeecCCccceEEEEEEcccC
Q psy2775 8 LEGIPPTFSKKT----KPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEV---VFSDQSDMHSYVSIVTIKSIK 80 (785)
Q Consensus 8 ~~~~~p~~~~~~----~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~i~~~~ 80 (785)
....||.|...+ ..+.+.+|++++|.|.+.|.|.+.+.|++++..+....+. ...... .+|.|.+++
T Consensus 11 ~~~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~------~~L~i~~~~ 84 (231)
T 3ojm_B 11 NNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH------WSLIMESVV 84 (231)
T ss_dssp --CEEEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGG------TEEEECSCC
T ss_pred CCccCCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCc------ceEEEecCC
Confidence 345678887766 7899999999999999999999999999999988654332 222111 359999999
Q ss_pred CCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceec-CCCceEeccCCcEEEEEEEeccCCCeEEEeE----CCEEcc
Q psy2775 81 KREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILE-PLHDVSITEGESAVLSVQVGGEPSPKVEWYK----DGKLIK 155 (785)
Q Consensus 81 ~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~----~g~~~~ 155 (785)
.+|+|.|+|.+.|..+.......|.|......+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ +|..+.
T Consensus 85 ~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~ 164 (231)
T 3ojm_B 85 PSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYG 164 (231)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBC
T ss_pred cccCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCcccc
Confidence 99999999999999998888888888765444555543 3457788999999999999999999999999 777664
Q ss_pred cceE-----EE-----eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCC
Q psy2775 156 DRQI-----TS-----EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYE 204 (785)
Q Consensus 156 ~~~~-----~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 204 (785)
.... .. .....+|.|.++..+|+|.|+|.|.|..|..+..+.|.|...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 223 (231)
T 3ojm_B 165 PDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQ 223 (231)
T ss_dssp TTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEecCC
Confidence 3310 00 1123469999999999999999999999999999999997543
No 135
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.88 E-value=1.7e-22 Score=194.47 Aligned_cols=187 Identities=24% Similarity=0.375 Sum_probs=138.7
Q ss_pred EEEEecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCC-----EEEEEeCcEE--EEEEccCCCC
Q psy2775 409 LNVVELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSEN-----VTLSIDGKKQ--KLIIFSAGLE 480 (785)
Q Consensus 409 ~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~-----~~~~~~~~~~--~L~i~~~~~~ 480 (785)
+.+...||.+...+....+.+|+.++|.|.+.+ +.+.+.|++++..+..... .....++... .|.|.+++.+
T Consensus 3 l~~~~~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~ 82 (212)
T 2v9r_A 3 LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRP 82 (212)
T ss_dssp ---CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCC
T ss_pred cCcccCCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcc
Confidence 344456788888888899999999999999987 7789999999998764321 1122222211 2445677999
Q ss_pred CcEEEEEEEeec-Ccc-eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCC
Q psy2775 481 DAGEYSCRVGDT-GDK-ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQA 558 (785)
Q Consensus 481 d~G~Y~C~a~n~-g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 558 (785)
|+|.|+|.|.|. |.. ...+.|.|...+
T Consensus 83 d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~--------------------------------------------------- 111 (212)
T 2v9r_A 83 DEGVYVCVARNYLGEAVSHDASLEVAILR--------------------------------------------------- 111 (212)
T ss_dssp SCEEEEEEEEETTEEEECCCEEEEECEEC---------------------------------------------------
T ss_pred cCeEEEEEEECCCCceeecceEEEEEecc---------------------------------------------------
Confidence 999999999997 433 346777776543
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEE-ecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKV-KASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
+.+...+....+.+|+.++|.|.+ .|+|.|.+.|+|++..+.......... + ..|.|.++.. +|+|.|+|.|.|.
T Consensus 112 ~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~-~--~~L~i~~~~~-~d~G~Y~C~a~N~ 187 (212)
T 2v9r_A 112 DDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR-G--GKLMITYTRK-SDAGKYVCVGTNM 187 (212)
T ss_dssp SSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE-T--TEEEESSCCG-GGCEEEEEEEEET
T ss_pred ccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc-C--CeEEEeeCCH-hhCeeEEEEEecc
Confidence 122222335578899999999999 999999999999999997655433332 2 3699999999 9999999999999
Q ss_pred CcceEEE-EEEEEE
Q psy2775 638 LGSATHG-ARVTVD 650 (785)
Q Consensus 638 ~g~~~~~-~~l~V~ 650 (785)
.|...+. +.|.|.
T Consensus 188 ~g~~~s~~~~l~V~ 201 (212)
T 2v9r_A 188 VGERESEVAELTVL 201 (212)
T ss_dssp TEEEECCCEEEEEE
T ss_pred cCceecceEEEEEE
Confidence 9987664 777776
No 136
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.88 E-value=1.8e-22 Score=200.30 Aligned_cols=204 Identities=13% Similarity=0.113 Sum_probs=125.4
Q ss_pred CCCCCceEEEEEEeccceEEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeCCC------ceEEEEECC--EEc----
Q psy2775 388 ISVHDEGEYTCSLPDQETSAELNVVELPPEISVPLQDVKVSRDEKASFEIELTKGD------ALVKWYKDG--KEI---- 455 (785)
Q Consensus 388 ~~~~d~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~------~~i~W~~~~--~~~---- 455 (785)
+..+|+|.|+|.|........+.+...++.+...+....+.+|++++|.|.+.+.+ +.+.|+|++ ..+
T Consensus 11 v~~~dsg~Y~C~a~g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~ 90 (254)
T 2c1o_A 11 VRPGTSVKLSCKASGYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLI 90 (254)
T ss_dssp ---------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEE
T ss_pred ecCCccEEEEEcCchhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEE
Confidence 67889999999998322222222223356666667788899999999999998843 789999843 221
Q ss_pred --------ccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCc
Q psy2775 456 --------AFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGD 525 (785)
Q Consensus 456 --------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 525 (785)
....++.+..++....|+|.+++.+|+|.|+|.|.|. +. ......|.|.....
T Consensus 91 ~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~----------------- 153 (254)
T 2c1o_A 91 YLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADA----------------- 153 (254)
T ss_dssp ETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCB-----------------
T ss_pred EeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCC-----------------
Confidence 1235677766777789999999999999999999986 32 12234666654210
Q ss_pred eeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CC-CceEEEeCCEEecCC-
Q psy2775 526 ATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PA-PSIVWFRNNKPLLSS- 602 (785)
Q Consensus 526 ~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~-p~v~W~~~~~~i~~~- 602 (785)
+|.+...........|+.++|.|.+.|. |+ +.|+|+|+|.++..+
T Consensus 154 --------------------------------~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 201 (254)
T 2c1o_A 154 --------------------------------APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGV 201 (254)
T ss_dssp --------------------------------CCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTE
T ss_pred --------------------------------CCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcc
Confidence 1333332223334468899999999985 44 369999999988654
Q ss_pred CC-eeEEeeC-----CeEEEEEccCCCCCCceeEEEEEEcCCcce
Q psy2775 603 PK-KREIFDG-----ENIILELKEADSETDAGDYKVVATNELGSA 641 (785)
Q Consensus 603 ~~-~~~~~~~-----~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~ 641 (785)
.. ......+ ..+.|.|.++.. +|+|.|+|.|.|.....
T Consensus 202 ~~~~~~~~~~~g~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 202 LNSWTDQDSKDSTYSMSSTLTLTKDEY-ERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEEECCCCTTTCCEEEEEEEEEEHHHH-HTCCEEEEEEECTTCSS
T ss_pred eeccccccCCCCcEEEEEEEEeccccc-cCCCeEEEEEEcCCCCC
Confidence 11 1111111 145799999998 99999999999998754
No 137
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=2.8e-22 Score=192.92 Aligned_cols=179 Identities=24% Similarity=0.389 Sum_probs=139.2
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEc------------cCCCCEEEeecCCccceEEEEEEccc
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPL------------QETDEVVFSDQSDMHSYVSIVTIKSI 79 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~------------~~~~~~~~~~~~~~~~~~~~L~i~~~ 79 (785)
|..|...+..+.+.+|++++|.|.+.+.|.+.+.|++++..+ ....++.+.. ..|+|.++
T Consensus 1 ~~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--------~~L~i~~v 72 (212)
T 1f97_A 1 KGSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS--------SGITFSSV 72 (212)
T ss_dssp CCEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET--------TEEEESCC
T ss_pred CceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec--------eeEEEccc
Confidence 567888999999999999999999999899999999987542 1223333322 35999999
Q ss_pred CCCCCeEEEEEEEcCCe--eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEE-EeccCCCeEEEeECCE-Ecc
Q psy2775 80 KKREEGVYTVVAKNREG--EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQ-VGGEPSPKVEWYKDGK-LIK 155 (785)
Q Consensus 80 ~~~D~G~Y~C~a~~~~~--~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~-~~g~p~~~v~W~~~g~-~~~ 155 (785)
+.+|+|.|+|.|.+..+ .....+.|.|.. +|.+........+.+|+.+.|.|. +.+.|.+.+.|++++. .+.
T Consensus 73 ~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~ 148 (212)
T 1f97_A 73 TRKDNGEYTCMVSEEGGQNYGEVSIHLTVLV----PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLT 148 (212)
T ss_dssp CGGGCEEEEEEEEETTSSSEEEEEEEEEEEB----CCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC
T ss_pred CcccCeEEEEEEEccCCCcccEEEEEEEEEc----CCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccc
Confidence 99999999999999866 556677777763 444433334467889999999999 6889999999999999 776
Q ss_pred cce----------EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeE--EEEEEEEeec
Q psy2775 156 DRQ----------ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV--ESAANLNVDP 202 (785)
Q Consensus 156 ~~~----------~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~ 202 (785)
... ........+|.|.++..+|+|.|+|.|.|..|.. +..+.|.|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 149 ADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp -----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred ccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 432 2233445689999999999999999999999987 4456676654
No 138
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.88 E-value=1.4e-22 Score=195.94 Aligned_cols=185 Identities=21% Similarity=0.343 Sum_probs=138.8
Q ss_pred EEecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCC--CEEEEEeCc--EEEEEEccCCCCCcEEE
Q psy2775 411 VVELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSE--NVTLSIDGK--KQKLIIFSAGLEDAGEY 485 (785)
Q Consensus 411 v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~--~~~~~~~~~--~~~L~i~~~~~~d~G~Y 485 (785)
....+|.+...+....+.+|+.+.|.|.+.+ +.+.+.|+++|..+.... ...+...+. ...|+|.+++.+|+|.|
T Consensus 5 ~~~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 5 GQYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp -CCCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred cccCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 3456788888888899999999999999988 678899999999886542 222222222 22347889999999999
Q ss_pred EEEEeec-Ccc-eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEee
Q psy2775 486 SCRVGDT-GDK-ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIE 563 (785)
Q Consensus 486 ~C~a~n~-g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~ 563 (785)
+|.|.|. |.. .....|.|...+ |.+..
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~---------------------------------------------------~~~~~ 113 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLR---------------------------------------------------DDFRV 113 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEEC---------------------------------------------------CSCSB
T ss_pred EEEEecCCCccccccceEEEEEeC---------------------------------------------------CCcEE
Confidence 9999997 433 335666665432 22222
Q ss_pred eeeeeeeeecCeEEEEEEE-ecCCCCceEEEeCCEEecCCC--------CeeEEeeCCeEEEEEccCCCCCCceeEEEEE
Q psy2775 564 RFEEKTVKEKGTIRLMAKV-KASPAPSIVWFRNNKPLLSSP--------KKREIFDGENIILELKEADSETDAGDYKVVA 634 (785)
Q Consensus 564 ~~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~~~i~~~~--------~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a 634 (785)
.+....+.+|+.++|.|.+ .|+|.|.+.|+|+|..+.... +... . ...+|.|.++.. +|+|.|+|.|
T Consensus 114 ~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~-~--~~~~L~i~~~~~-~d~G~Y~C~a 189 (217)
T 2vr9_A 114 EPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI-V--DGGNLLISNVEP-IDEGNYKCIA 189 (217)
T ss_dssp CCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEE-E--TTTEEEESSCCS-TTCEEEEEEE
T ss_pred CCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEe-c--CCCcEEEeeCCH-HHCeEEEEEE
Confidence 2335678899999999999 899999999999999987432 2211 1 223699999999 9999999999
Q ss_pred EcCCcceEEEEEEEEE
Q psy2775 635 TNELGSATHGARVTVD 650 (785)
Q Consensus 635 ~n~~g~~~~~~~l~V~ 650 (785)
.|..|....+..+.|.
T Consensus 190 ~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 190 QNLVGTRESSYAKLIV 205 (217)
T ss_dssp EETTEEEECCCEEEEE
T ss_pred EcccceeccccEEEEE
Confidence 9999999888666664
No 139
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.88 E-value=4.1e-22 Score=191.81 Aligned_cols=179 Identities=23% Similarity=0.315 Sum_probs=133.3
Q ss_pred CcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEc------------ccCCCEEEEEeCcEEEEEEccCCCCCc
Q psy2775 416 PEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEI------------AFSENVTLSIDGKKQKLIIFSAGLEDA 482 (785)
Q Consensus 416 ~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~------------~~~~~~~~~~~~~~~~L~i~~~~~~d~ 482 (785)
..+..++....+.+|+.+.|.|.+.+ +.+.+.|++++..+ ....++.+.. ..|.|.+++.+|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccC
Confidence 34455667788999999999999998 78899999987652 2234444332 4799999999999
Q ss_pred EEEEEEEeec-C--cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCC
Q psy2775 483 GEYSCRVGDT-G--DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAP 559 (785)
Q Consensus 483 G~Y~C~a~n~-g--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p 559 (785)
|.|+|.|.|. | .....+.|.|..++.
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~--------------------------------------------------- 106 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLVPPS--------------------------------------------------- 106 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEBCCC---------------------------------------------------
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEcCCC---------------------------------------------------
Confidence 9999999996 5 345567777776532
Q ss_pred eEeeeeeeeeeeecCeEEEEEE-EecCCCCceEEEeCCE-EecCCCCe-------eEEeeCCeEEEEEccCCCCCCceeE
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAK-VKASPAPSIVWFRNNK-PLLSSPKK-------REIFDGENIILELKEADSETDAGDY 630 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~-~~g~P~p~v~W~~~~~-~i~~~~~~-------~~~~~~~~~~L~i~~~~~~~d~G~Y 630 (785)
+........+.+|+.++|.|. +.|+|.|.+.|+|++. .+...... .........+|.|.++.. +|+|.|
T Consensus 107 -~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y 184 (212)
T 1f97_A 107 -KPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTA-FDSGEY 184 (212)
T ss_dssp -CCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCG-GGCEEE
T ss_pred -CcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecCh-hhCcEE
Confidence 111122456889999999999 7999999999999999 87654331 222334556799999999 999999
Q ss_pred EEEEEcCCcceEEEEEEEEEe
Q psy2775 631 KVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~~l~V~~ 651 (785)
+|.|.|..|....+..+.|.+
T Consensus 185 ~C~a~n~~g~~~~s~~~~l~V 205 (212)
T 1f97_A 185 YCQAQNGYGTAMRSEAAHMDA 205 (212)
T ss_dssp EEEEECSSSCCEECCCEEEEE
T ss_pred EEEEccccCCccccceEEEEE
Confidence 999999999985555555443
No 140
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.88 E-value=1.7e-21 Score=188.04 Aligned_cols=180 Identities=21% Similarity=0.282 Sum_probs=142.4
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT- 492 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~- 492 (785)
.+.+...+.+..+.+|+.+.|.|.+.+ +.+.+.|++++..+..... ..|.|.+++.+|+|.|+|.|.|.
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~~~n~~ 88 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNT---------SELIFNAVHVKDAGFYVCRVNNNF 88 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCCS---------SEEEETTCCGGGCEEEEEEEECTT
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCCC---------CEEEEccCChhhCeEeEEEEEcCC
Confidence 456667778889999999999999988 6788999999998865432 36999999999999999999997
Q ss_pred Ccc-eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeee
Q psy2775 493 GDK-ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVK 571 (785)
Q Consensus 493 g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~ 571 (785)
|.. ...+.|.|...+..+....+.+ ...+|.+...+....+.
T Consensus 89 ~~~~s~~~~l~V~~~~~~~~~~~~~~-------------------------------------~~~~p~~~~~~~~~~v~ 131 (218)
T 3k0w_A 89 TFEFSQWSQLDVCDIPESFQRSVDGV-------------------------------------SESKLQICVEPTSQKLM 131 (218)
T ss_dssp CCEECCCEEEEEECCCGGGCTTCCSB-------------------------------------CCSSCEEEECCCCEEEC
T ss_pred CCceeeEEEEEEEccCcccccccccc-------------------------------------cCCCceEEECCCceeec
Confidence 533 5568888887654332221111 11236677777788899
Q ss_pred ecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcc-eEEEEEEEEE
Q psy2775 572 EKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGS-ATHGARVTVD 650 (785)
Q Consensus 572 ~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 650 (785)
+|+.++|.|.+.|+|.|.|.|++++..+..+. ..+|.|.++.. +|+|.|+|.|.|..|. ....+.|.|.
T Consensus 132 ~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 132 PGSTLVLQCVAVGSPIPHYQWFKNELPLTHET---------KKLYMVPYVDL-EHQGTYWCHVYNDRDSQDSKKVEIIID 201 (218)
T ss_dssp TTCCEEEECEEEBSSCCEEEEEETTEECTTCC---------SSEEEESSCCG-GGCEEEEEEEECSSCEEECCCEEEEEC
T ss_pred CCCcEEEEEEecccCCCeEEEEECCEECCCCC---------CCEEEEeecCh-hcCEEEEEEEEcCCCCceeeeEEEEEe
Confidence 99999999999999999999999999886543 24699999999 9999999999999987 4445666665
No 141
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.88 E-value=1.4e-21 Score=187.98 Aligned_cols=173 Identities=21% Similarity=0.303 Sum_probs=139.2
Q ss_pred cCCCeEEEEEEEEec-CCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEEcCCeeEEEEee
Q psy2775 25 EENSEVTLEVRLVAV-PEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAKNREGEAKMDIP 103 (785)
Q Consensus 25 ~~G~~v~l~C~~~g~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~ 103 (785)
.+|+.+.|.|.+.+. |.+.|.|++++..+....++.+...++. ..|+|.+++.+|+|.|+|.|.|..+.....+.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~----~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~ 90 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQ----IWLQINEPTPNDKGKYVMELFDGKTGHQKTVD 90 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTE----EEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCE----EEEEECCCCcccCEEEEEEEecCCcceEEEEE
Confidence 367888888988775 5789999999999988888877665542 46999999999999999999998887776666
Q ss_pred EEEeC-----------------CCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccce---EEEe-
Q psy2775 104 VKVNT-----------------GKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ---ITSE- 162 (785)
Q Consensus 104 v~v~~-----------------~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~---~~~~- 162 (785)
|.+.. ..+.++.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|..+.... +...
T Consensus 91 l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~ 170 (212)
T 2r15_A 91 LSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEA 170 (212)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEET
T ss_pred EEEeeccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcC
Confidence 65431 00123333444556789999999999999999999999999999987542 2222
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
+...+|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 171 ~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 171 GRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209 (212)
T ss_dssp TTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEE
Confidence 456799999999999999999999999999888888886
No 142
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.87 E-value=8.8e-22 Score=193.70 Aligned_cols=189 Identities=20% Similarity=0.309 Sum_probs=141.0
Q ss_pred cCCccccc----CCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCE-EEEEeCcEEEEEEccCCCCCcEEEEE
Q psy2775 414 LPPEISVP----LQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENV-TLSIDGKKQKLIIFSAGLEDAGEYSC 487 (785)
Q Consensus 414 ~~~~~~~~----~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C 487 (785)
.+|.+..+ +....+.+|+++.|.|.+.+ +.+.+.|++++..+...... ..........|.|.+++.+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 35555433 34677889999999999998 67789999999988654432 11222233579999999999999999
Q ss_pred EEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEe-eee
Q psy2775 488 RVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFI-ERF 565 (785)
Q Consensus 488 ~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~-~~~ 565 (785)
.|.|. |.......|.|...+.. +|.+. ...
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~~------------------------------------------------~~~~~~~~~ 121 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSPH------------------------------------------------RPILQAGLP 121 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCCC------------------------------------------------CCEEEECTT
T ss_pred EEeecCCceEEEEEEEEeccCCC------------------------------------------------CceeecCCC
Confidence 99997 77777788888764210 02222 223
Q ss_pred eeeeeeecCeEEEEEEEecCCCCceEEEe----CCEEecCCCCeeEEe--------eCCeEEEEEccCCCCCCceeEEEE
Q psy2775 566 EEKTVKEKGTIRLMAKVKASPAPSIVWFR----NNKPLLSSPKKREIF--------DGENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 566 ~~~~v~~g~~v~l~C~~~g~P~p~v~W~~----~~~~i~~~~~~~~~~--------~~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
....+.+|+.++|.|.+.|+|.|.+.|++ ++..+..+....... .....+|.|.++.. +|+|.|+|.
T Consensus 122 ~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~ 200 (241)
T 3grw_A 122 ANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSE-RDGGEYLCR 200 (241)
T ss_dssp CSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCG-GGCEEEEEE
T ss_pred ccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCc-ccCcEEEEE
Confidence 46678899999999999999999999999 888876554432211 12356899999999 999999999
Q ss_pred EEcCCcceEEEEEEEEEe
Q psy2775 634 ATNELGSATHGARVTVDV 651 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~~ 651 (785)
|.|..|....++.|.|..
T Consensus 201 a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 201 ATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp EECSSCEEEEEEEEEC--
T ss_pred EecCcceEEEEEEEEecC
Confidence 999999998877777753
No 143
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.87 E-value=1e-21 Score=186.75 Aligned_cols=168 Identities=15% Similarity=0.133 Sum_probs=131.5
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCe-eEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPD-LLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..|.|...|....+.+|++++|.|.+.+.|.+. +.|++++..+.... .+|.|.+++.+|+|.|+|
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~--------------~~L~i~~v~~~D~G~Y~C 71 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA--------------SSYFIDAATVDDSGEYRC 71 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS--------------SEEEESSCCGGGCEEEEE
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc--------------cEEEEecccccCCEEEEE
Confidence 457888889889999999999999999887765 99999998876543 349999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCCeEEEeECCEEcccceEEEeCCEEEE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSPKVEWYKDGKLIKDRQITSEKNTHTL 168 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~~v~W~~~g~~~~~~~~~~~~~~~~L 168 (785)
.|.|... +..+.|.|. .+|.+...+ ...+.+|+.+.|.|.+.+. |.+.+.|++||..+... .....|
T Consensus 72 ~a~n~~~--s~~~~l~V~----~~p~~~~~~-~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~-----~~~~~L 139 (204)
T 3sgj_C 72 QTQLSTL--SDPVQLEVH----IGWLLLQAP-RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF-----HHNSDF 139 (204)
T ss_dssp EETTSBC--CCCEEEEEE----CSSEEEECS-CSEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE-----EECCCE
T ss_pred EeCCCcc--cccEEEEEe----cCceEecCC-ceeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc-----cCCceE
Confidence 9998543 345566665 345554443 3678899999999999655 56799999999886432 123479
Q ss_pred EEcccCCCCcEEEEEEEEcCC-eeEEEEEEEEeecCC
Q psy2775 169 TLIQCSTKDKGRYSVKVTNKE-GTVESAANLNVDPYE 204 (785)
Q Consensus 169 ~i~~~~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~~~~ 204 (785)
.|.+++.+|+|.|+|.|.|.. +..+..+.|.|...+
T Consensus 140 ~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~ 176 (204)
T 3sgj_C 140 YIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGL 176 (204)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcC
Confidence 999999999999999999954 445556788887543
No 144
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.87 E-value=8.9e-21 Score=177.75 Aligned_cols=164 Identities=18% Similarity=0.267 Sum_probs=128.6
Q ss_pred eEEecCCcEEEEEEEeC-CCc--eEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecCcceeEEEE
Q psy2775 425 VKVSRDEKASFEIELTK-GDA--LVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTGDKESKATL 501 (785)
Q Consensus 425 ~~v~~g~~~~l~C~~~~-~~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g~~~~~~~l 501 (785)
..+.+|+.++|.|.+.+ +.+ .+.|++++..+....... ....|.|. +.+|+|.|+|.|.|. ....+.|
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~-----~~~~l~i~--~~~d~G~Y~C~~~n~--~~~~~~l 78 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPG-----QKTEFKVD--SDDQWGEYSCVFLPE--PMGTANI 78 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCC-----SEEEEEEC--GGGCCEEEEEEEEST--TSCEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccC-----CcEEEEEe--chhhCeEEEEEEECC--cCcEEEE
Confidence 45778999999999987 445 899999999886554321 23456666 689999999999983 4467788
Q ss_pred EEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEE
Q psy2775 502 TVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAK 581 (785)
Q Consensus 502 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~ 581 (785)
.|..+ |.+...+....+.+|+.++|.|.
T Consensus 79 ~V~~~----------------------------------------------------P~~~~~~~~~~~~~g~~~~l~C~ 106 (184)
T 3b5h_A 79 QLHGP----------------------------------------------------PRVKAVKSSEHINEGETAMLVCK 106 (184)
T ss_dssp EECCS----------------------------------------------------CCCEESCSEEEECTTSCEEEEEE
T ss_pred EEecC----------------------------------------------------CceeecCCCcEEcCCCcEEEEEE
Confidence 88765 33333334567889999999999
Q ss_pred EecCC-CCceEEEe---CCE-EecCC--CCeeEEeeCCeEEEEEccCC-CCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 582 VKASP-APSIVWFR---NNK-PLLSS--PKKREIFDGENIILELKEAD-SETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 582 ~~g~P-~p~v~W~~---~~~-~i~~~--~~~~~~~~~~~~~L~i~~~~-~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+.|+| .|.|.|+| ++. .+... .++.+...+....|.|.++. . +|+|.|+|.|.|..|....++.|.|.
T Consensus 107 ~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~-~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 107 SESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNME-ADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp CCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTT-TSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecccc-ccCceEEEEEEeCCCcceEEEEEEEe
Confidence 99999 78999999 444 44332 45666666777899999999 8 99999999999999999998888875
No 145
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.87 E-value=1.7e-21 Score=180.70 Aligned_cols=166 Identities=16% Similarity=0.156 Sum_probs=130.2
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCe-eEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPD-LLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
..+|.|...|..+.+.+|++++|.|.+.+.|.+. +.|++++..+.... +.|.|.+++.+|+|.|+
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~~--------------~~L~i~~~~~~d~G~Y~ 70 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQA--------------SSYFIDAATVNDSGEYR 70 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESSC--------------SEEEESSCCGGGCEEEE
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCCc--------------eEEEEeCCCcccCEEEE
Confidence 3578889999999999999999999998887765 89999998775321 34999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCC-eEEEeECCEEcccceEEEeCCEEE
Q psy2775 89 VVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSP-KVEWYKDGKLIKDRQITSEKNTHT 167 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~-~v~W~~~g~~~~~~~~~~~~~~~~ 167 (785)
|.+.|..+ ...+.|.|. .++.+... ....+.+|+.+.|.|.+.+.+++ .+.|+++|..+... .....
T Consensus 71 C~~~n~~~--s~~~~l~V~----~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~-----~~~~~ 138 (175)
T 1fnl_A 71 CQTNLSTL--SDPVQLEVH----IGWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF-----HHNSD 138 (175)
T ss_dssp EECSSSCC--CCCEEEEEE----CSSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE-----EECCC
T ss_pred EEeeCCcc--cccEEEEEe----CCCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC-----CCCCE
Confidence 99998655 334556665 23333333 44678899999999999877654 99999999987432 12357
Q ss_pred EEEcccCCCCcEEEEEEEEcCCee-EEEEEEEEee
Q psy2775 168 LTLIQCSTKDKGRYSVKVTNKEGT-VESAANLNVD 201 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 201 (785)
|.|.+++.+|+|.|+|.|.|..+. .+..+.|.|.
T Consensus 139 L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 139 FHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEcccChhhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 999999999999999999997664 3445677775
No 146
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.87 E-value=1.4e-21 Score=186.27 Aligned_cols=186 Identities=18% Similarity=0.235 Sum_probs=136.9
Q ss_pred CCcccccCCCeEEecCCcEEEEEE-EeC-CC-ceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEee
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIE-LTK-GD-ALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~-~~~-~~-~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
|+....++....+.+|+.+.|.|. +.+ +. +.+.|++++..+................|.|.+++.+|+|.|+|.|.|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEe
Confidence 444455667888999999999999 655 66 899999999877532222222222234799999999999999999999
Q ss_pred c-Cccee---EEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeee
Q psy2775 492 T-GDKES---KATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEE 567 (785)
Q Consensus 492 ~-g~~~~---~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~ 567 (785)
. +.... ...+.+..... ....+|.+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~p~~~~~~~~ 122 (201)
T 3s97_C 88 PSITKSVFSKFIPLIPIPERT---------------------------------------------TKPYPADIVVQFKD 122 (201)
T ss_dssp GGGTEEEECCCEEEEEECCSS---------------------------------------------CCCEEEEEEEECCC
T ss_pred cCCCcchhhcccceeeccccc---------------------------------------------cCCCCCceEecCCc
Confidence 5 33332 23333332110 00012556665567
Q ss_pred eeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEE
Q psy2775 568 KTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARV 647 (785)
Q Consensus 568 ~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 647 (785)
..+.+|+.++|.|.+.|+|.|.|.|++++..+.... .. .....+|.|.++.. +|+|.|+|.|.|..|....++.|
T Consensus 123 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~--~~--~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l 197 (201)
T 3s97_C 123 VYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA--EI--STSGAVLKIFNIQL-EDEGIYECEAENIRGKDKHQARI 197 (201)
T ss_dssp EEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTC--EE--ETTTTEEEECSCCG-GGCEEEEEEEEETTEEEEEEEEE
T ss_pred eEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCce--ee--cCCCCEEEEccCCh-hhCEEEEEEEEecCCceeeeEEE
Confidence 889999999999999999999999999999776442 22 22345799999999 99999999999999999999988
Q ss_pred EEE
Q psy2775 648 TVD 650 (785)
Q Consensus 648 ~V~ 650 (785)
.|+
T Consensus 198 ~V~ 200 (201)
T 3s97_C 198 YVQ 200 (201)
T ss_dssp EEE
T ss_pred EEe
Confidence 886
No 147
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.87 E-value=1.8e-21 Score=185.50 Aligned_cols=183 Identities=19% Similarity=0.282 Sum_probs=140.6
Q ss_pred CCeeeecCCceEecCCCeEEEEEE-EEecCC-CeeEEEECCEEccC--CCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVR-LVAVPE-PDLLWYYNGEPLQE--TDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~-~~g~p~-~~i~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
|+.+...+..+.+.+|++++|.|. +.+.|. +.+.|++++..+.. ..+......+ .+|.|.+++.+|+|.|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~------~~L~i~~v~~~d~G~Y 81 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTN------GNLYIANVEASDKGNY 81 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTT------CCEEESSCCGGGCEEE
T ss_pred CccCcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCC------CeEEECcCCcccCeEE
Confidence 344445668899999999999999 788888 99999999977642 2333332222 2499999999999999
Q ss_pred EEEEEcCCeeEEE---EeeEEEeCC---CCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEE
Q psy2775 88 TVVAKNREGEAKM---DIPVKVNTG---KPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITS 161 (785)
Q Consensus 88 ~C~a~~~~~~~~~---~~~v~v~~~---~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~ 161 (785)
+|.+.+..+.... ...+.+... ...+|.+........+..|+.+.|.|.+.|.|.+.+.|++++..+.......
T Consensus 82 ~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~ 161 (201)
T 3s97_C 82 SCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEIS 161 (201)
T ss_dssp EEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTCEEE
T ss_pred EEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCceeec
Confidence 9999986654433 233333221 1234556665568889999999999999999999999999999877543222
Q ss_pred eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 162 EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 162 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
....+|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 162 -~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 162 -TSGAVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp -TTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred -CCCCEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 234489999999999999999999999999988888885
No 148
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.87 E-value=4.6e-22 Score=197.34 Aligned_cols=181 Identities=12% Similarity=0.173 Sum_probs=124.1
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecCC-----CCceEEEeCC--EEe------------cCCCCeeEEeeCCeEEEEEc
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKASP-----APSIVWFRNN--KPL------------LSSPKKREIFDGENIILELK 619 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~P-----~p~v~W~~~~--~~i------------~~~~~~~~~~~~~~~~L~i~ 619 (785)
+.+...+....+.+|++++|.|.+.|.| .+.|.|+|++ ..+ ....++.....+...+|+|.
T Consensus 39 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 118 (254)
T 2c1o_A 39 LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKIS 118 (254)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEEC
Confidence 4455556678899999999999999998 4899999843 211 11245555556677899999
Q ss_pred cCCCCCCceeEEEEEEcCCcceEE-EEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCC
Q psy2775 620 EADSETDAGDYKVVATNELGSATH-GARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDP 698 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~ 698 (785)
+++. +|+|.|+|.|.|..+.... ...|.|.. ...+|.+..
T Consensus 119 ~v~~-~D~G~Y~C~a~n~~~~~~~~~~~l~V~~--------------------------------------~~~~P~v~~ 159 (254)
T 2c1o_A 119 RVEA-EDLGIYYCVQGSHFPPTFGAGTKLELKR--------------------------------------ADAAPTVSI 159 (254)
T ss_dssp SCCG-GGCSEEEEEECSSSSCEEBCCEEEEECC--------------------------------------CCBCCEEEE
T ss_pred cCCc-ccCEEEEEEEEcCcceEecCCEEEEECC--------------------------------------CCCCCeeEe
Confidence 9999 9999999999998764332 23455531 113444432
Q ss_pred CCCCcEEeecCCeEEEEEEEecC-CC-CceEEeECCEEeeec--cccccch------hhhcccccceeeeeeceEEEEEE
Q psy2775 699 PPPPEVLVKKGEDLKIEVRFKAL-PP-PKAEWTVNGTVIVPS--KRVKGKA------EFIKKLDDLEVKERENAVLEVEV 768 (785)
Q Consensus 699 ~~~~~~~~~~g~~~~l~C~~~g~-P~-p~i~W~~~~~~~~~~--~~~~~~~------~~~~~l~~~~v~~~~~~~~~c~~ 768 (785)
..... .+..|+.++|.|.+.|. |+ +.|+|+++|..+..+ .+..... .....|.+..+...|.|.|+|.+
T Consensus 160 ~~~~~-~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a 238 (254)
T 2c1o_A 160 FPPSS-EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEA 238 (254)
T ss_dssp ECCCH-HHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEE
T ss_pred ecCCh-hhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEE
Confidence 21211 12358899999999995 44 369999999998776 1111111 12346778888888999999999
Q ss_pred eccc----ceeEEee
Q psy2775 769 TSDK----ADVKWFK 779 (785)
Q Consensus 769 ~~~~----~~~~w~~ 779 (785)
.++. ....|-|
T Consensus 239 ~n~~~~~~~~~~~~~ 253 (254)
T 2c1o_A 239 THKTSTSPIVKSFNR 253 (254)
T ss_dssp ECTTCSSCEEEEEEC
T ss_pred EcCCCCCcceEeccC
Confidence 9744 4566654
No 149
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.87 E-value=1.7e-21 Score=187.23 Aligned_cols=175 Identities=11% Similarity=0.042 Sum_probs=124.6
Q ss_pred CCCeEEecC--CcEEEEEEEeCCCceEEEEEC---CEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecCcce
Q psy2775 422 LQDVKVSRD--EKASFEIELTKGDALVKWYKD---GKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTGDKE 496 (785)
Q Consensus 422 ~~~~~v~~g--~~~~l~C~~~~~~~~i~W~~~---~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g~~~ 496 (785)
+..+.+.+| ++++|.|.+.++.+.+.|+++ +..+....++.....+ .|+|.+++.+|+|.|+|.|.|.+...
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~p~~~v~w~~~~~~g~~~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~~~~~ 90 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKINDESY 90 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSSTTCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC----CE
T ss_pred ceEEEEecCCCccEEEeeccCCCCcEEEEEhhcCCCccccCCCcccccCCc---cEEEccCChhcCceEEEEEEECCeeE
Confidence 356778899 999999999888889999884 6666555444333222 59999999999999999999964333
Q ss_pred eE--EEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeee-eeeeeeeec
Q psy2775 497 SK--ATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIER-FEEKTVKEK 573 (785)
Q Consensus 497 ~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~-~~~~~v~~g 573 (785)
.+ ..|.|.... +|.+... .....+.+|
T Consensus 91 ~s~~~~l~v~~~~--------------------------------------------------~p~~~~~~~~~~~v~~G 120 (213)
T 2x1w_L 91 QSIMYIVVVVGYR--------------------------------------------------IYDVVLSPSHGIELSVG 120 (213)
T ss_dssp ECCCEEEEECBCC--------------------------------------------------EEEEEEESCSCEEEETT
T ss_pred EEEEEEEEEeCCc--------------------------------------------------ccceEEcCCCCeEEcCC
Confidence 33 555554311 0222222 234488999
Q ss_pred CeEEEEEEEecCCC--CceEEEeCCEEecCCCC-eeEEe-------eCCeEEEEEccCCCCCCceeEEEEEEcCCcceEE
Q psy2775 574 GTIRLMAKVKASPA--PSIVWFRNNKPLLSSPK-KREIF-------DGENIILELKEADSETDAGDYKVVATNELGSATH 643 (785)
Q Consensus 574 ~~v~l~C~~~g~P~--p~v~W~~~~~~i~~~~~-~~~~~-------~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 643 (785)
++++|.|.+.|.|. +.+.|+++|..+..... ..... ....++|.|.+++. +|+|.|+|.|.|..|....
T Consensus 121 ~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N~~g~~~~ 199 (213)
T 2x1w_L 121 EKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTR-SDQGLYTCAASSGLMTKKN 199 (213)
T ss_dssp CCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCG-GGCEEEEEEEECSSCEEEE
T ss_pred CCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCc-ccCEEEEEEEecCCCcEEE
Confidence 99999999999764 47999999886532211 00000 12245799999999 9999999999999999988
Q ss_pred EEEEEEE
Q psy2775 644 GARVTVD 650 (785)
Q Consensus 644 ~~~l~V~ 650 (785)
++.|.|.
T Consensus 200 ~~~l~V~ 206 (213)
T 2x1w_L 200 STFVRVH 206 (213)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 8888887
No 150
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.86 E-value=4.8e-22 Score=188.31 Aligned_cols=171 Identities=11% Similarity=0.051 Sum_probs=118.0
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.+|.|...|.. .+.+|++++|.|.+.+.|. .+.|+|++..+..... ..........|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-----~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 76 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-----NPLEPKNKARFSIPSMTEHHAGRYRCY 76 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-----CCCSSTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-----cccCCccccEEEeccCChhHCeEEEEE
Confidence 57899888874 8999999999999988765 8999999986643211 000111235699999999999999999
Q ss_pred EEcCCeeEE--EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEE--E---eC
Q psy2775 91 AKNREGEAK--MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQIT--S---EK 163 (785)
Q Consensus 91 a~~~~~~~~--~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~--~---~~ 163 (785)
|.|..+... ..+.|.|.. ...+|.+...+ ...+.+|+.++|.|.+.+.| +.+.|+|+|..+...... . ..
T Consensus 77 a~n~~g~~~~s~~~~l~V~~-~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~ 153 (196)
T 2d3v_A 77 YYSPAGWSEPSDPLELVVTG-FYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQ 153 (196)
T ss_dssp EEETTEECBCCCCEEEEEEC-SSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSC
T ss_pred EeCCCCcCCcCccEEEEecC-CCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCC
Confidence 998876432 345666653 22356665543 35788999999999999888 899999999887543221 1 12
Q ss_pred CEEEEEEcccCCCCcEEEEEEEEcCCee
Q psy2775 164 NTHTLTLIQCSTKDKGRYSVKVTNKEGT 191 (785)
Q Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 191 (785)
....|.|.+++.+|+|.|+|.|.|..+.
T Consensus 154 ~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 154 FQALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp EEEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred ceeEEEeeecCcccCeeEEEEEEccCCC
Confidence 3478999999999999999999998753
No 151
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.86 E-value=3e-21 Score=185.48 Aligned_cols=177 Identities=17% Similarity=0.164 Sum_probs=128.1
Q ss_pred ecCCceEecCC--CeEEEEEEEEecCCCeeEEEEC---CEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEE
Q psy2775 17 KKTKPVYAEEN--SEVTLEVRLVAVPEPDLLWYYN---GEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVA 91 (785)
Q Consensus 17 ~~~~~~~v~~G--~~v~l~C~~~g~p~~~i~W~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 91 (785)
..|..+.+.+| ++++|.|.+.+ |.+.+.|+++ +..+....++...... .|+|.+++.+|+|.|+|.|
T Consensus 12 ~~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~-------~l~I~~v~~~D~G~Y~C~a 83 (213)
T 2x1w_L 12 DQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKK-------GFTIPSYMISYAGMVFCEA 83 (213)
T ss_dssp --CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTT-------EEEEEGGGTTTCSEEEEEE
T ss_pred CCceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCc-------cEEEccCChhcCceEEEEE
Confidence 35689999999 99999999976 7789999884 6666555444332221 3999999999999999999
Q ss_pred EcCCeeEEE-EeeEEEeCCCCCCCceec-CCCceEeccCCcEEEEEEEeccC--CCeEEEeECCEEcccceE---EE---
Q psy2775 92 KNREGEAKM-DIPVKVNTGKPEKPSILE-PLHDVSITEGESAVLSVQVGGEP--SPKVEWYKDGKLIKDRQI---TS--- 161 (785)
Q Consensus 92 ~~~~~~~~~-~~~v~v~~~~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g~p--~~~v~W~~~g~~~~~~~~---~~--- 161 (785)
.|..+.... .+.|.|.. ..+|.+.. +...+.+.+|+.++|.|.+.|.| .+.+.|+++|..+..... ..
T Consensus 84 ~n~~~~~~s~~~~l~v~~--~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~ 161 (213)
T 2x1w_L 84 KINDESYQSIMYIVVVVG--YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ 161 (213)
T ss_dssp C----CEECCCEEEEECB--CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCC
T ss_pred EECCeeEEEEEEEEEEeC--CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccc
Confidence 985443332 25566632 23444443 44455899999999999999854 458999999876543211 10
Q ss_pred -----eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecC
Q psy2775 162 -----EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPY 203 (785)
Q Consensus 162 -----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 203 (785)
.....+|.|.+++.+|+|.|+|.|.|..|..+..+.|.|...
T Consensus 162 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~ 208 (213)
T 2x1w_L 162 SGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHED 208 (213)
T ss_dssp SSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-
T ss_pred cCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEecc
Confidence 122457999999999999999999999999999999999743
No 152
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.86 E-value=7.2e-22 Score=187.15 Aligned_cols=170 Identities=12% Similarity=0.065 Sum_probs=128.3
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.+|.|...|.. .+.+|++++|.|.+.+ +.+.+.|+|++..+...... ... ......|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~---~~~--~~~~~~L~i~~v~~~D~G~Y~C~ 76 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQN---PLE--PKNKARFSIPSMTEDYAGRYRCY 76 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEEC---CCS--SSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccc---ccc--CCceEEEEeccCCcccCceEEEE
Confidence 47889888888 8999999999999987 77899999999876432110 000 01235699999999999999999
Q ss_pred EEcCCee--EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceE----EEeCC
Q psy2775 91 AKNREGE--AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQI----TSEKN 164 (785)
Q Consensus 91 a~~~~~~--~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~----~~~~~ 164 (785)
|.|..+. .+..+.|.|.. .+.+|.+...+. ..+.+|+.++|.|.+.+. ++.+.|+|+|..+..... .....
T Consensus 77 a~n~~g~~~~s~~~~l~V~~-~~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~ 153 (196)
T 3p2t_A 77 YRSPVGWSQPSDPLELVMTG-AYSKPTLSALPS-PLVTSGKSVTLLCQSRSP-MDTFLLCKERAAHPLLCLRSEHGAQQH 153 (196)
T ss_dssp EEETTEEBCCCCCEEEEEEC-SSCCCEEEEESC-SEECTTCCEEEEEEEEEE-EEEEEEEETTCCCGGGSEEEEEEEEEE
T ss_pred EeCCCcccCCCccEEEEecC-CCCCCEEEeCCc-ceecCCCeEEEEEecCCC-CCEEEEEeCCCcccceeecccccccCc
Confidence 9998873 23445666643 234566665543 367899999999999874 468999999987654321 12234
Q ss_pred EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 165 THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 165 ~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
...|.|.+++.+|+|.|+|.|.|..+
T Consensus 154 ~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 154 QAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred ceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 56899999999999999999999875
No 153
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.86 E-value=5.7e-21 Score=182.08 Aligned_cols=182 Identities=12% Similarity=0.117 Sum_probs=135.4
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCC-----CeeEEEE-CCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPE-----PDLLWYY-NGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~-----~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
+..++..+.+.+|++++|.|.+.+.|. +.+.|++ ++.......+..+..+. ......+|.|.+++.+|+|.|+
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~ 83 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQ-LPLGKALFHIPSVQVRDSGQYR 83 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGG-GGGTEEEEEECSCCGGGCEEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeecc-ccCCeeEEEECCCCHHHCcEEE
Confidence 455667899999999999999988876 7899999 44444444555544321 1223467999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeC-CEEE
Q psy2775 89 VVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEK-NTHT 167 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~-~~~~ 167 (785)
|.|.+..+.....+.|.|... +..|.+.. ..+..|+.+.|.|.+.|.|.+.+.|++++..+......... ....
T Consensus 84 C~~~~~~~~~~~~~~l~V~~~-~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~ 158 (202)
T 3bp6_B 84 CLVICGAAWDYKYLTVKVKAS-YMRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQV 158 (202)
T ss_dssp EEEEETTEEEEEEEEEEEEBC-CCCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEEEEEECTTSCEEE
T ss_pred EEEEeCCCcceEEEEEEecCC-CCcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCccCceeeCCCCCEEE
Confidence 999999988888888888641 22233321 24568999999999999999999999988766443222222 2356
Q ss_pred EEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeec
Q psy2775 168 LTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDP 202 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 202 (785)
+.|.++..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 159 ~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 159 TSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp EEEEEECCCTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred EEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecC
Confidence 77889999999999999999999988888888753
No 154
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.86 E-value=9.2e-21 Score=179.80 Aligned_cols=176 Identities=15% Similarity=0.217 Sum_probs=126.6
Q ss_pred eeecCCc-eEecCCCeEEEEEEEEecCCCeeEEEECC-EEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEE
Q psy2775 15 FSKKTKP-VYAEENSEVTLEVRLVAVPEPDLLWYYNG-EPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAK 92 (785)
Q Consensus 15 ~~~~~~~-~~v~~G~~v~l~C~~~g~p~~~i~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 92 (785)
|...|.. +.+.+|++++|.|.+.|.|.+.|.|+++. ..+ .... . ..+. ...|+|.+++.+|+|.|+|.|.
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~--~~~~-~-~~~~----~~~L~I~~v~~~D~G~Y~C~a~ 74 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL--NGKV-T-NEGT----TSTLTMNPVSFGNEHSYLCTAT 74 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC--SSEE-E-EETT----EEEEEESSCCGGGCSEEEEEEE
T ss_pred EEECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc--cceE-E-EcCC----ccEEEECcCCHHHCEEEEEEEE
Confidence 4445555 45569999999999999999999999843 211 1111 1 1111 2459999999999999999999
Q ss_pred cCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCC---CeEEEeECCEEcccceEEE-------e
Q psy2775 93 NREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPS---PKVEWYKDGKLIKDRQITS-------E 162 (785)
Q Consensus 93 ~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~---~~v~W~~~g~~~~~~~~~~-------~ 162 (785)
|..+..+..+.|.|.. .|..+.+.. . ..+.+|+.++|.|.+.|.++ +.|+|+++|..+....... .
T Consensus 75 n~~~~~~~~~~l~V~~-~p~~~~~~~--~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~ 150 (202)
T 1vca_A 75 CESRKLEKGIQVEIYS-FPKDPEIHL--S-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLE 150 (202)
T ss_dssp ETTEEEEEEEEEEEEB-CCSCCEEEE--S-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCE
T ss_pred ECCceEeeEEEEEEEe-CCCCCEeCC--c-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcce
Confidence 9998887888888874 122233322 2 56889999999999987543 3799999999876443211 1
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCCee-------EEEEEEEEeec
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKEGT-------VESAANLNVDP 202 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-------~~~~~~l~V~~ 202 (785)
.....|.|.....+|.|.|+|+|.|..+. .+.+..|.|..
T Consensus 151 ~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y 197 (202)
T 1vca_A 151 TKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYI 197 (202)
T ss_dssp EEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEEC
T ss_pred EEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEec
Confidence 12345778888889999999999998765 45567777763
No 155
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.86 E-value=2.1e-21 Score=189.59 Aligned_cols=179 Identities=21% Similarity=0.316 Sum_probs=137.6
Q ss_pred CCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEE-EEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEE
Q psy2775 423 QDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTL-SIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKA 499 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~ 499 (785)
....+.+|+++.|.|.+.+ +.+.+.|++++..+....+... ........|.|.+++.+|+|.|+|.|.|. |......
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~ 106 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 106 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccE
Confidence 6778999999999999997 6788999999998865543211 12223357999999999999999999997 7777788
Q ss_pred EEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEee-eeeeeeeeecCeEEE
Q psy2775 500 TLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIE-RFEEKTVKEKGTIRL 578 (785)
Q Consensus 500 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~l 578 (785)
.|.|...+.. +|.+.. .+....+.+|+.++|
T Consensus 107 ~l~V~~~~~~------------------------------------------------~p~~~~~~~~~~~~~~g~~~~l 138 (231)
T 3ojm_B 107 HLDVVERSRH------------------------------------------------RPILQAGLPANASTVVGGDVEF 138 (231)
T ss_dssp EEEEECCCCC------------------------------------------------CCEECTTCSCCEEEETTCCEEE
T ss_pred EEEEEcCCCC------------------------------------------------CCceeeccCCceEEEeCCcEEE
Confidence 8888764310 022221 234567889999999
Q ss_pred EEEEecCCCCceEEEe----CCEEecCCCCeeE--Ee-----eCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEE
Q psy2775 579 MAKVKASPAPSIVWFR----NNKPLLSSPKKRE--IF-----DGENIILELKEADSETDAGDYKVVATNELGSATHGARV 647 (785)
Q Consensus 579 ~C~~~g~P~p~v~W~~----~~~~i~~~~~~~~--~~-----~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 647 (785)
.|.+.|+|.|.+.|++ +|..+..+..... .. .....+|.|.++.. +|+|.|+|.|.|..|....++.|
T Consensus 139 ~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n~~g~~~~~~~l 217 (231)
T 3ojm_B 139 VCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTE-ADAGEYICKVSNYIGQANQSAWL 217 (231)
T ss_dssp ECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCG-GGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCH-HHCeEEEEEEEeccceEeeEEEE
Confidence 9999999999999999 7877755443211 11 12235799999999 99999999999999999888888
Q ss_pred EEE
Q psy2775 648 TVD 650 (785)
Q Consensus 648 ~V~ 650 (785)
.|.
T Consensus 218 ~V~ 220 (231)
T 3ojm_B 218 TVL 220 (231)
T ss_dssp EEE
T ss_pred EEe
Confidence 876
No 156
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.86 E-value=1.1e-21 Score=182.41 Aligned_cols=167 Identities=20% Similarity=0.217 Sum_probs=128.8
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCC-eeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEP-DLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
.+|.|...|..+.+.+|++++|.|.+.+.+.+ .+.|++++..+.... +.|.|.+++.+|+|.|+|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~~--------------~~L~i~~v~~~d~G~Y~C 68 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETN--------------SSLNIVNAKFEDSGEYKC 68 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCCS--------------SEEEECSCCGGGCEEEEE
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCCc--------------eEEEEeccceecCEEEEE
Confidence 57899999999999999999999999887774 699999998876431 349999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcccceEEEeCCEEEE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIKDRQITSEKNTHTL 168 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L 168 (785)
.+.|..+.. .+.|.|. .++.+... ....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+... .....|
T Consensus 69 ~~~~~~~s~--~~~l~V~----~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~-----~~~~~L 136 (176)
T 1f2q_A 69 QHQQVNESE--PVYLEVF----SDWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW-----YENHNI 136 (176)
T ss_dssp ECTTSSCCC--CEEEEEE----CSSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSC-----CCSSEE
T ss_pred EcCCccccc--cEEEEEe----CcceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeee-----cCCCeE
Confidence 999876543 4455554 23333333 34578899999999999 45667799999999987432 234589
Q ss_pred EEcccCCCCcEEEEEEEEcCCee-EEEEEEEEeecC
Q psy2775 169 TLIQCSTKDKGRYSVKVTNKEGT-VESAANLNVDPY 203 (785)
Q Consensus 169 ~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~ 203 (785)
.|.+++.+|+|.|+|.|.|..+. .+..+.|.|...
T Consensus 137 ~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 172 (176)
T 1f2q_A 137 SITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKA 172 (176)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECS
T ss_pred EECCCCcccCEEEEEEEEeCCcceEecCEEEEEecC
Confidence 99999999999999999997554 334478888744
No 157
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.86 E-value=4e-21 Score=183.18 Aligned_cols=175 Identities=17% Similarity=0.145 Sum_probs=129.4
Q ss_pred ccCCCeEEecCCcEEEEEEEeCC-C-----ceEEEEE-CCEEcccCCCEEEEEeC---cEEEEEEccCCCCCcEEEEEEE
Q psy2775 420 VPLQDVKVSRDEKASFEIELTKG-D-----ALVKWYK-DGKEIAFSENVTLSIDG---KKQKLIIFSAGLEDAGEYSCRV 489 (785)
Q Consensus 420 ~~~~~~~v~~g~~~~l~C~~~~~-~-----~~i~W~~-~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a 489 (785)
.++..+.+.+|+++.|.|.+.+. . +.+.|+| ++.......+..+..+. ....|.|.+++.+|+|.|+|.|
T Consensus 7 ~p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 86 (202)
T 3bp6_B 7 APKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLV 86 (202)
T ss_dssp CSCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEE
Confidence 34556788999999999999884 3 7899999 55544445555554332 4578999999999999999999
Q ss_pred eec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeee
Q psy2775 490 GDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEK 568 (785)
Q Consensus 490 ~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~ 568 (785)
.|. +.....+.|.|..++.. |.+. ..
T Consensus 87 ~~~~~~~~~~~~l~V~~~~~~-------------------------------------------------p~~~----~~ 113 (202)
T 3bp6_B 87 ICGAAWDYKYLTVKVKASYMR-------------------------------------------------IDTR----IL 113 (202)
T ss_dssp EETTEEEEEEEEEEEEBCCCC-------------------------------------------------EEEE----EE
T ss_pred EeCCCcceEEEEEEecCCCCc-------------------------------------------------ccEE----EE
Confidence 997 65677788888765310 1111 12
Q ss_pred eeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEE
Q psy2775 569 TVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVT 648 (785)
Q Consensus 569 ~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 648 (785)
.+.+|+.++|.|.+.|+|.|.|.|++++..+.. ......++....|.|.++.. +|+|.|+|.|.|..|....++.|.
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~-~d~G~Y~C~a~N~~g~~~~~~~l~ 190 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKP-QPSRNFSCMFWNAHMKELTSAIID 190 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECC-CTTCCEEEEEEETTTTEEEEEEEC
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEc-CCCCEEEEEEEcCCcccccEEEEE
Confidence 456799999999999999999999998875531 11111223345677888888 999999999999999999888887
Q ss_pred EE
Q psy2775 649 VD 650 (785)
Q Consensus 649 V~ 650 (785)
|.
T Consensus 191 v~ 192 (202)
T 3bp6_B 191 PL 192 (202)
T ss_dssp C-
T ss_pred ec
Confidence 75
No 158
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.86 E-value=2.2e-22 Score=209.36 Aligned_cols=199 Identities=17% Similarity=0.193 Sum_probs=149.2
Q ss_pred CceEEEEEEeccceEEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccCCCEEEEEeCcEE
Q psy2775 392 DEGEYTCSLPDQETSAELNVVELPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFSENVTLSIDGKKQ 470 (785)
Q Consensus 392 d~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 470 (785)
+.|.|+|.+.+......+ ..-.+|.+...+....+.+|+.+.|.|.+.+ +.+.+.|++++..+....... ......
T Consensus 136 ~~~~~~C~~~~~l~~l~~-~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~--~~~~~~ 212 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHMPN-ASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKS--GGLPSL 212 (347)
T ss_dssp GGGCCCCSSSSCSSCCCC-TTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCC--CCSSEE
T ss_pred cccCCCCCCChHHhcCCc-ccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccc--eecccc
Confidence 468899988773222211 1113567777777788999999999999988 678899999987643221110 123456
Q ss_pred EEEEccCCCCCcE-EEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccccc
Q psy2775 471 KLIIFSAGLEDAG-EYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVP 548 (785)
Q Consensus 471 ~L~i~~~~~~d~G-~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 548 (785)
.|.|.+++.+|+| .|+|.|.|. |.....+.|.|..+|
T Consensus 213 ~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P----------------------------------------- 251 (347)
T 2ifg_A 213 GLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPA----------------------------------------- 251 (347)
T ss_dssp EEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEE-----------------------------------------
T ss_pred eEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCC-----------------------------------------
Confidence 8999999999999 999999997 666666777775542
Q ss_pred ccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEee-------CCeEEEEEccC
Q psy2775 549 TCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFD-------GENIILELKEA 621 (785)
Q Consensus 549 ~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~-------~~~~~L~i~~~ 621 (785)
.+ ....+.+|+.++|.|.+.|+|.|.|+|+|+|..+..+........ ....+|+|.++
T Consensus 252 -----------~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 316 (347)
T 2ifg_A 252 -----------SV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQP 316 (347)
T ss_dssp -----------EE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSC
T ss_pred -----------ee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCC
Confidence 22 122356799999999999999999999999999986544333221 23668999999
Q ss_pred CCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 622 DSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 622 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 317 ~~-~d~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 317 TH-VNNGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp CG-GGCEEEEEEEEETTEEEEEEEEECSC
T ss_pred Cc-ccCceEEEEEecCCCceeeEEEEEec
Confidence 99 99999999999999998888777764
No 159
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.86 E-value=2.9e-21 Score=191.20 Aligned_cols=262 Identities=11% Similarity=0.103 Sum_probs=112.1
Q ss_pred eecCCceEecCCCeEEEEEEEEecCCCe-eEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEEcC
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVPEPD-LLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAKNR 94 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~ 94 (785)
...|..+.|.+|++++|+|.+. .+.+. +.|...- ... .....+. .-..|.|.+++.+ |.|+|.+...
T Consensus 3 ~v~P~~~~V~~G~sv~l~Cs~~-c~~p~~~~~~t~l---~~~---~~~~~g~---~~~~~~l~~v~~~--~~y~C~~~~~ 70 (291)
T 1mq8_A 3 SVSPSKVILPRGGSVLVTCSTS-CDQPKLLGIETPL---PKK---ELLLPGN---NRKVYELSNVQED--SQPMCYSNCP 70 (291)
T ss_dssp EEECSEEEECTTCEEEEEEEEC-CSSCSEEEEECSS---CCC---CCCCSCS---SEEEEEEESCCSC--CCCEEEEECS
T ss_pred EEeCCccEEcCCCeEEEEEeCC-CCCCccceEEecC---CCc---ccccCCC---ceEEEEEEecccC--CeEEEEEEcC
Confidence 4457789999999999999986 34444 8885311 000 0000111 1124788888753 4699999876
Q ss_pred CeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC--eEEEeECCEEcccceEEEeCCEEEEEEc
Q psy2775 95 EGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP--KVEWYKDGKLIKDRQITSEKNTHTLTLI 171 (785)
Q Consensus 95 ~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~--~v~W~~~g~~~~~~~~~~~~~~~~L~i~ 171 (785)
.......+.|.|+. .|..|.|... ...+.+|+.++|.|.+.|. |.. +|+|||+++.+............+|.+.
T Consensus 71 ~~~~~~~v~l~V~~-~P~~v~I~~~--~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~~~~~~~~~l~~~ 147 (291)
T 1mq8_A 71 DGQSTAKTFLTVYW-TPERVELAPL--PSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVL 147 (291)
T ss_dssp SCEEEEECEEEECB-CCSCCCBCCC--CSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEECCBTTEEEEEECC
T ss_pred CccEEEEEEEEEec-CCCCCEEecC--CccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccCCCCCceEEEEee
Confidence 55666777888864 3444444433 2457889999999999765 443 5999999988865542222334577777
Q ss_pred ccCCCCcEEEEEEEEcCCee--------EEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCC
Q psy2775 172 QCSTKDKGRYSVKVTNKEGT--------VESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLH 243 (785)
Q Consensus 172 ~~~~~d~G~Y~C~a~n~~g~--------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 243 (785)
..+.+|.+.|+|+|.|..+. .+....|.|...++ ..+.+..
T Consensus 148 ~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~----------------------------~~~~~~~--- 196 (291)
T 1mq8_A 148 VRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA----------------------------TPPQLVS--- 196 (291)
T ss_dssp CSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-------------------------------------------
T ss_pred eeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCC----------------------------CCceecC---
Confidence 77888888999999987542 12335566654321 1122222
Q ss_pred cceeCCCCeEEEEEEEccCCCC---eEEEEECCEEcccceEEEeCCEEEEEEccC---CC--CCCeEEEEEEEeCCCceE
Q psy2775 244 DVSITEGESAVLSVQVGGEPSP---KVEWYKDGKLIKDRQITSEKNTHTLTLIQC---ST--KDKGRYSVKVTNKEGTVE 315 (785)
Q Consensus 244 ~~~~~~G~~~~l~C~~~g~p~~---~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~---~~--~d~G~Y~C~~~n~~g~~~ 315 (785)
...+.+|+.++|.|.+.|+|++ .+.|+++|+.+........ + .+++... .. ++.+.|+|.+.+......
T Consensus 197 p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~~~g-~--~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~ 273 (291)
T 1mq8_A 197 PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGN-D--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQE 273 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCceeeecC-C--eEEEEEecceeEcCCCCEEEEEEEEeCCcceE
Confidence 2257799999999999997654 6999999998874332222 2 2333222 23 446778899988665666
Q ss_pred EEEEEEEeccc
Q psy2775 316 SAANLNVDQGK 326 (785)
Q Consensus 316 ~~~~l~v~~~~ 326 (785)
....|+|+..|
T Consensus 274 ~~~~l~v~~~~ 284 (291)
T 1mq8_A 274 TLQTVTIYSFP 284 (291)
T ss_dssp -----------
T ss_pred EEEEEEEEcCC
Confidence 77788887643
No 160
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.85 E-value=7.1e-21 Score=180.90 Aligned_cols=162 Identities=16% Similarity=0.223 Sum_probs=122.6
Q ss_pred CcccccCCCeEEecCCcEEEEEEEeC-CCce-EEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecC
Q psy2775 416 PEISVPLQDVKVSRDEKASFEIELTK-GDAL-VKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTG 493 (785)
Q Consensus 416 ~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g 493 (785)
|.+...+....+.+|++++|.|.+.+ +.+. +.|+++|..+.... ..|.|.+++.+|+|.|+|.|.|.
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n~- 76 (204)
T 3sgj_C 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQLS- 76 (204)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETTS-
T ss_pred CeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCCC-
Confidence 44555566678999999999999988 4444 99999999886543 37999999999999999999983
Q ss_pred cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeec
Q psy2775 494 DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEK 573 (785)
Q Consensus 494 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g 573 (785)
..+..+.|.|..++ .+... ....+.+|
T Consensus 77 ~~s~~~~l~V~~~p----------------------------------------------------~~~~~-~~~~v~~G 103 (204)
T 3sgj_C 77 TLSDPVQLEVHIGW----------------------------------------------------LLLQA-PRWVFKEE 103 (204)
T ss_dssp BCCCCEEEEEECSS----------------------------------------------------EEEEC-SCSEEETT
T ss_pred cccccEEEEEecCc----------------------------------------------------eEecC-CceeEeCC
Confidence 34556778877653 11111 12467889
Q ss_pred CeEEEEEEEecC-CCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCC-cceEEEEEEEEE
Q psy2775 574 GTIRLMAKVKAS-PAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNEL-GSATHGARVTVD 650 (785)
Q Consensus 574 ~~v~l~C~~~g~-P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~-g~~~~~~~l~V~ 650 (785)
+.++|.|.+.+. |.+.|.|+|+|..+.. ......|.|.++.. +|+|.|+|.|.|.. +.....+.|.|.
T Consensus 104 ~~v~L~C~~~~~~p~~~v~W~k~g~~~~~--------~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (204)
T 3sgj_C 104 DPIHLRCHSWKNTALHKVTYLQNGKGRKY--------FHHNSDFYIPKATL-KDSGSYFCRGLVGSKNVSSETVQITIT 173 (204)
T ss_dssp CCEEEEEEEGGGCCCEEEEEEETTEEEEE--------EEECCCEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CcEEEEEEecCCCCCceEEEEECCcEeec--------ccCCceEEECcCCc-ccCEEEEEEEEeCCCceecCcEEEEEe
Confidence 999999999766 6679999999998632 12244699999999 99999999999954 444444555554
No 161
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.85 E-value=2.1e-21 Score=186.42 Aligned_cols=184 Identities=13% Similarity=0.045 Sum_probs=133.1
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEE--EEEEcccCCCCCeEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVS--IVTIKSIKKREEGVY 87 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y 87 (785)
..+|.|...|. ..+.+|++|+|.|.+.+ +.+.|.|+|++..+...... ..... ... .|.|.+++.+|+|.|
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~~-~~~~~----~~~~~~L~I~~v~~~D~G~Y 79 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIGR-RLKFW----NETDPEFVIDHMDANKAGRY 79 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECSE-ECC--------CCCEEEECSCCGGGCEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCcccccccc-cCCCC----cceeeEEEEcccccccCEEE
Confidence 46789998887 58999999999999976 67899999998655322111 00000 012 599999999999999
Q ss_pred EEEEEcCCeeEE--EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCE
Q psy2775 88 TVVAKNREGEAK--MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNT 165 (785)
Q Consensus 88 ~C~a~~~~~~~~--~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~ 165 (785)
+|.|.|..+... ..+.|.|.. ...+|.+...+ ...+.+|+.++|.|.+.+.|.+.+.|+|+|..+... .......
T Consensus 80 ~C~a~n~~~~~~~s~~~~l~V~~-~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~-~~~~~~~ 156 (218)
T 1uct_A 80 QCQYRIGHYRFRYSDTLELVVTG-LYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ-HQSGEHP 156 (218)
T ss_dssp EEEEEETTTEEEECCCEEEEEEC-SSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS-EEECSSS
T ss_pred EEEEEcCCCceeecCCEEEEEcC-cccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc-ccCCCcc
Confidence 999999765333 345566643 23456665554 457889999999997777778899999999877643 2233456
Q ss_pred EEEEEcccCCCCcEEEEEEEEcCCe-----eEEEEEEEEeecC
Q psy2775 166 HTLTLIQCSTKDKGRYSVKVTNKEG-----TVESAANLNVDPY 203 (785)
Q Consensus 166 ~~L~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~ 203 (785)
..|.|.+++.+|+|.|+|.|.|... ..+..+.|.|.+.
T Consensus 157 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 157 ANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp EEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred CEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 7899999999999999999998642 2234467777643
No 162
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.85 E-value=4.7e-21 Score=184.46 Aligned_cols=179 Identities=20% Similarity=0.205 Sum_probs=133.3
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEEC--CEEcc------------CCCCEEEeecCCccceEEEEEEcc
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYN--GEPLQ------------ETDEVVFSDQSDMHSYVSIVTIKS 78 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~L~i~~ 78 (785)
|.+...| .+.+.+|++++|.|.+.+.|.+.+.|+++ +.... ...++.+.... ...+|+|.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~ 76 (213)
T 3mj8_L 2 YTLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSG----NMATLTISK 76 (213)
T ss_dssp CCBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET----TEEEEEESS
T ss_pred eeEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecC----CEEEEEECC
Confidence 5677777 99999999999999999889999999983 21110 22344433321 235699999
Q ss_pred cCCCCCeEEEEEEEcCCe---eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC-CeEEEeECCEE
Q psy2775 79 IKKREEGVYTVVAKNREG---EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS-PKVEWYKDGKL 153 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~~---~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~-~~v~W~~~g~~ 153 (785)
++.+|+|.|+|.|.+..+ .....+.|.|......+|.+...+....+..|+.+.|.|.+.|. |+ +.|.|++||..
T Consensus 77 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~ 156 (213)
T 3mj8_L 77 AQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTP 156 (213)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcc
Confidence 999999999999999877 34455677777544467777766655556689999999999885 43 49999999998
Q ss_pred cccceE----EEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEE
Q psy2775 154 IKDRQI----TSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAA 196 (785)
Q Consensus 154 ~~~~~~----~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 196 (785)
+..... ....+ ...|.|.++..+|+|.|+|.|.|..+....++
T Consensus 157 l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 157 ITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp ECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred cCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 865311 10222 34689999999999999999999987665544
No 163
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.85 E-value=4.6e-21 Score=189.72 Aligned_cols=180 Identities=13% Similarity=0.218 Sum_probs=130.6
Q ss_pred eeecCCceEecCCCeEEEEEEEEe---cCCCeeEEEECCEEcc------------------------------CCCCEEE
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVA---VPEPDLLWYYNGEPLQ------------------------------ETDEVVF 61 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g---~p~~~i~W~~~~~~~~------------------------------~~~~~~~ 61 (785)
+..++..+.+.+|++++|.|.+.+ .|.+.|.|++++.... ...+..+
T Consensus 5 v~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 5 VRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp EECSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EEcCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 455677899999999999999988 7888999999875321 0112222
Q ss_pred eecCCccceEEEEEEcccCCCCCeEEEEEEEcCCee-----EEEEeeEEEeCCCCCCCcee-cCCCceEeccCCcEEEEE
Q psy2775 62 SDQSDMHSYVSIVTIKSIKKREEGVYTVVAKNREGE-----AKMDIPVKVNTGKPEKPSIL-EPLHDVSITEGESAVLSV 135 (785)
Q Consensus 62 ~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~-----~~~~~~v~v~~~~~~~p~i~-~~~~~~~~~~G~~v~l~C 135 (785)
...+ ..+|+|.+++.+|+|.|+|.|.+..+. +...+.|.|.... .+|.+. ..+....+.+|+.+.|.|
T Consensus 85 ~~~~-----~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-~~~~~~~~~~~~~~v~~g~~v~L~C 158 (250)
T 2fbo_J 85 ANLA-----APTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT-PSNNVHVSTAEVVQVDEGNDITMTC 158 (250)
T ss_dssp SCTT-----SCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS-CCSCCEECCCSEEECCTTCCEEECC
T ss_pred ccCC-----cceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC-CCCeEEEecCceEEecCCCcEEEEE
Confidence 1111 135999999999999999999987663 3556777776422 233333 344567788899999999
Q ss_pred EEeccCCCeEEEeECCEEcccce------------------------EEEeCCEEEEEEcccCCCCcEEEEEEEEc---C
Q psy2775 136 QVGGEPSPKVEWYKDGKLIKDRQ------------------------ITSEKNTHTLTLIQCSTKDKGRYSVKVTN---K 188 (785)
Q Consensus 136 ~~~g~p~~~v~W~~~g~~~~~~~------------------------~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n---~ 188 (785)
.+.+.|.|.|+|++++..+.... ........+|.|.+++.+|+|.|+|.|.| .
T Consensus 159 ~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~ 238 (250)
T 2fbo_J 159 PCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGE 238 (250)
T ss_dssp CEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSG
T ss_pred EecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccc
Confidence 99998999999999988775411 00001225899999999999999999999 5
Q ss_pred CeeEEEEEEEEe
Q psy2775 189 EGTVESAANLNV 200 (785)
Q Consensus 189 ~g~~~~~~~l~V 200 (785)
.|....++.|.|
T Consensus 239 ~g~~~~~~~l~V 250 (250)
T 2fbo_J 239 LDADRSSTILKV 250 (250)
T ss_dssp GGEEEEEEEEEC
T ss_pred cCccceeEEEeC
Confidence 556666666654
No 164
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.85 E-value=4.4e-20 Score=175.10 Aligned_cols=172 Identities=16% Similarity=0.218 Sum_probs=128.0
Q ss_pred ceEeccCCcEEEEEEEeccCCCeEEEeECC-EEcccceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 122 DVSITEGESAVLSVQVGGEPSPKVEWYKDG-KLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 122 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
...+.+|+.+.|.|.+.|.|.+.|.|+++. ..+. ...........|.|.+++.+|+|.|+|.|.|..|..+..+.|.|
T Consensus 10 ~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V 88 (202)
T 1vca_A 10 RYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN-GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEI 88 (202)
T ss_dssp EEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS-SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEE
T ss_pred cEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc-ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEE
Confidence 344558999999999999999999999843 2222 23334455668999999999999999999999998888888888
Q ss_pred ecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCC---CeEEEEECCEEcc
Q psy2775 201 DPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPS---PKVEWYKDGKLIK 277 (785)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~---~~v~W~~~~~~l~ 277 (785)
...+ ..+.+.. . ..+.+|+.++|.|.+.+.++ +.|.|++++..+.
T Consensus 89 ~~~p-----------------------------~~~~~~~--~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~ 136 (202)
T 1vca_A 89 YSFP-----------------------------KDPEIHL--S-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK 136 (202)
T ss_dssp EBCC-----------------------------SCCEEEE--S-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEE
T ss_pred EeCC-----------------------------CCCEeCC--c-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECc
Confidence 7543 1222222 1 56789999999999987543 3799999998876
Q ss_pred cceEEE-------eCCEEEEEEccCCCCCCeEEEEEEEeCCCc-------eEEEEEEEEeccc
Q psy2775 278 DRQITS-------EKNTHTLTLIQCSTKDKGRYSVKVTNKEGT-------VESAANLNVDQGK 326 (785)
Q Consensus 278 ~~~~~~-------~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~-------~~~~~~l~v~~~~ 326 (785)
...... ......|.|.....+|+|.|+|+|.|..+. ...+..|.|.++|
T Consensus 137 ~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P 199 (202)
T 1vca_A 137 SQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP 199 (202)
T ss_dssp EEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC
T ss_pred ccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCC
Confidence 322111 112346788888889999999999998765 3556788888654
No 165
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.85 E-value=8e-21 Score=182.99 Aligned_cols=181 Identities=19% Similarity=0.293 Sum_probs=133.9
Q ss_pred eeecCCceEecCCCeEEEEEEEEecC----CCeeEEEE----------------CCEEccC-----CCCEEEeecCCccc
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVP----EPDLLWYY----------------NGEPLQE-----TDEVVFSDQSDMHS 69 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p----~~~i~W~~----------------~~~~~~~-----~~~~~~~~~~~~~~ 69 (785)
|...+..+.+.+|++++|.|.+.+.+ .+.+.|++ ++..+.. ..+..+... +...
T Consensus 3 i~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~ 81 (214)
T 3jz7_A 3 ITTPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSN-DVKS 81 (214)
T ss_dssp ---CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCS-CGGG
T ss_pred eecCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEecc-CccC
Confidence 44566789999999999999998876 46999998 3333321 334443321 1111
Q ss_pred eEEEEEEcccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEe
Q psy2775 70 YVSIVTIKSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWY 148 (785)
Q Consensus 70 ~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~ 148 (785)
...+|+|.+++.+|+|.|+|.|.+..+.....+.|.|.. +|.+........+..|+.+.|.|.+ .|.|.+.+.|+
T Consensus 82 ~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~ 157 (214)
T 3jz7_A 82 GDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV----KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQ 157 (214)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC----CCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEE
T ss_pred CcccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEc----CCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEE
Confidence 224599999999999999999999999888888888874 4444333333447889999999999 88999999999
Q ss_pred EC--CEEcccceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 149 KD--GKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 149 ~~--g~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
++ +..+..... ......+|.|.++..+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 158 ~~~~~~~~~~~~~-~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 158 KLSDSQTMPTPWL-AEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp ECSTTCCCCGGGG-GGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred ECCCCCccCccce-eccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 94 444433211 12223489999999999999999999999999888888886
No 166
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.85 E-value=2.3e-21 Score=183.96 Aligned_cols=170 Identities=13% Similarity=0.094 Sum_probs=122.0
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.+|.|...|.. .+.+|++++|.|.+.+.|. .+.|+|++..+....+....... ...|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~~~~~~~-----~~~L~i~~v~~~D~G~Y~C~ 76 (198)
T 1ugn_A 4 PKPTLWAEPGS-VITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRIPQELVK-----KGQFPIPSITWEHTGRYRCY 76 (198)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTSCHHHHT-----TTEEEESSCCGGGCEEEEEE
T ss_pred CCCeEeccCCC-cccCCCcEEEEEEecCCCc-EEEEEECCccccccccccccCCc-----ccEEEECCCCHHHCeEEEEE
Confidence 57899888874 8999999999999988765 69999999766321110000011 13599999999999999999
Q ss_pred EEcCC-ee--EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEE-----Ee
Q psy2775 91 AKNRE-GE--AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQIT-----SE 162 (785)
Q Consensus 91 a~~~~-~~--~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~-----~~ 162 (785)
|.|.. +. .+..+.|.|.. .+.+|.+...+ ...+.+|+.+.|.|.+.+. .+.+.|+|+|..+...... ..
T Consensus 77 a~n~~~g~~~~s~~~~l~V~~-~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~ 153 (198)
T 1ugn_A 77 YGSDTAGRSESSDPLELVVTG-AYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARG 153 (198)
T ss_dssp EEETTTEECCCCCCEEEEEEC-SSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------
T ss_pred EECCCCCcccCCccEEEEEcc-cccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCC
Confidence 99987 52 23455666653 23356665443 3678899999999999887 7799999999887533221 11
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
.....|.|.+++.+|+|.|+|.|.|..+
T Consensus 154 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 154 SSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred cceeEEEecccCcccCeEEEEEEEeCCC
Confidence 2357899999999999999999999865
No 167
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.85 E-value=6.1e-22 Score=190.11 Aligned_cols=173 Identities=25% Similarity=0.364 Sum_probs=133.7
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEc------------cCCCCEEEeecCCccceEEEEEEcc
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPL------------QETDEVVFSDQSDMHSYVSIVTIKS 78 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~------------~~~~~~~~~~~~~~~~~~~~L~i~~ 78 (785)
.++.|...+..+.+.+|+++.|.|.+.+.|.+.+.|++++..+ ....++.+.. ..|+|.+
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--------~~L~i~~ 74 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP--------TGITFKS 74 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET--------TEEECSC
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec--------cEEEEee
Confidence 5678888999999999999999999999899999999987542 1122232221 3599999
Q ss_pred cCCCCCeEEEEEEEcCCe--eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcc
Q psy2775 79 IKKREEGVYTVVAKNREG--EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIK 155 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~~--~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~ 155 (785)
++.+|+|.|+|.|.+..+ .....+.|.|.. +|.+........+..|+.+.|.|.+ .+.|.+.+.|+++|..+.
T Consensus 75 ~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~ 150 (209)
T 1nbq_A 75 VTREDTGTYTCMVSEEGGNSYGEVKVKLIVLV----PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMP 150 (209)
T ss_dssp CCTTSCSEEEEEEEETTSSCEECCEEECCEEB----CCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCC
T ss_pred CCHHHCcEEEEEEecCCCCccceEEEEEEEec----CCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCC
Confidence 999999999999998755 344455666653 4444433445568899999999997 889999999999998876
Q ss_pred cce----------EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE
Q psy2775 156 DRQ----------ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA 195 (785)
Q Consensus 156 ~~~----------~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 195 (785)
... ........+|.|.++..+|+|.|+|.|.|..|....+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 200 (209)
T 1nbq_A 151 TNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTS 200 (209)
T ss_dssp SCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEEC
T ss_pred CccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccccc
Confidence 532 1122244689999999999999999999999987444
No 168
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.85 E-value=7.7e-22 Score=189.39 Aligned_cols=179 Identities=19% Similarity=0.339 Sum_probs=133.0
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEc------------ccCCCEEEEEeCcEEEEEEccCCCCC
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEI------------AFSENVTLSIDGKKQKLIIFSAGLED 481 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~------------~~~~~~~~~~~~~~~~L~i~~~~~~d 481 (785)
+..+..++....+.+|+++.|.|.+.+ +.+.+.|++++..+ ....++.+. + ..|.|.+++.+|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~--~~L~i~~~~~~d 79 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL--P--TGITFKSVTRED 79 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE--T--TEEECSCCCTTS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee--c--cEEEEeeCCHHH
Confidence 344555667778899999999999998 78889999987552 112333332 2 479999999999
Q ss_pred cEEEEEEEeec-C--cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCC
Q psy2775 482 AGEYSCRVGDT-G--DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQA 558 (785)
Q Consensus 482 ~G~Y~C~a~n~-g--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 558 (785)
+|.|+|.|.|. | .....+.|.|..+|..
T Consensus 80 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~------------------------------------------------- 110 (209)
T 1nbq_A 80 TGTYTCMVSEEGGNSYGEVKVKLIVLVPPSK------------------------------------------------- 110 (209)
T ss_dssp CSEEEEEEEETTSSCEECCEEECCEEBCCCC-------------------------------------------------
T ss_pred CcEEEEEEecCCCCccceEEEEEEEecCCcC-------------------------------------------------
Confidence 99999999996 4 2345667777765421
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEE-ecCCCCceEEEeCCEEecCCCCe-------eEEeeCCeEEEEEccCCCCCCceeE
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKV-KASPAPSIVWFRNNKPLLSSPKK-------REIFDGENIILELKEADSETDAGDY 630 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~~~i~~~~~~-------~~~~~~~~~~L~i~~~~~~~d~G~Y 630 (785)
........+.+|+.++|.|.+ .|+|.|.+.|+|++..+..+... .........+|.|.++.. +|+|.|
T Consensus 111 ---~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y 186 (209)
T 1nbq_A 111 ---PTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSA-SDTGEY 186 (209)
T ss_dssp ---CCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCG-GGCCCE
T ss_pred ---CCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccc-cCCeEE
Confidence 111123457889999999997 89999999999999988765432 111223456799999999 999999
Q ss_pred EEEEEcCCcceEEEEEEEEE
Q psy2775 631 KVVATNELGSATHGARVTVD 650 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~~l~V~ 650 (785)
+|.|.|..|....+..+.|.
T Consensus 187 ~C~a~n~~g~~~~s~~v~l~ 206 (209)
T 1nbq_A 187 SCEARNGYGTPMTSNAVRME 206 (209)
T ss_dssp EEEEECSSSCCEECCCBCCE
T ss_pred EEEEeCCcCcccccccEEEE
Confidence 99999999998666555554
No 169
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.85 E-value=1.3e-20 Score=176.97 Aligned_cols=168 Identities=13% Similarity=0.104 Sum_probs=125.4
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.+|.|...|.. .+.+|++|+|.|.+.+ +.+.+.|+|++..+..... ..........|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-----~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 75 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-----KPPERINKVKFYIPDMNSRMAGQYSCI 75 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-----SSCTTCCEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCccccccc-----ccCCCcceeEEEeCcCCcccCeEEEEE
Confidence 47889888887 8999999999999865 4568999999987642100 000111235699999999999999999
Q ss_pred EEcCCeeE--EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEEE
Q psy2775 91 AKNREGEA--KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTL 168 (785)
Q Consensus 91 a~~~~~~~--~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L 168 (785)
+.|..+.. +..+.|.|.. ...+|.+...+ ...+.+|+.++|.|.+.+ +.+.+.|+|+|..+.. ..........|
T Consensus 76 ~~~~~~~~~~s~~~~l~V~~-~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~-~~~~~~~~~~L 151 (188)
T 1oll_A 76 YRVGELWSEPSNLLDLVVTE-MYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV-QRGYGKVQAEF 151 (188)
T ss_dssp EEETTEECCCCCCEEEEEES-CSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE-EEEECSSEEEE
T ss_pred ecCCCCCCCCCCceEEEecc-cCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc-cccCCCceeEE
Confidence 98865532 3345566653 22356666544 456889999999999865 4569999999977654 22344567789
Q ss_pred EEcccCCCCcEEEEEEEEcCC
Q psy2775 169 TLIQCSTKDKGRYSVKVTNKE 189 (785)
Q Consensus 169 ~i~~~~~~d~G~Y~C~a~n~~ 189 (785)
.|.+++.+|+|.|+|.|.|..
T Consensus 152 ~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 152 PLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp EEEECCGGGCEEEEEECEEET
T ss_pred EECCCCcCCCcEEEEEEEcCC
Confidence 999999999999999999864
No 170
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.85 E-value=2.5e-21 Score=201.39 Aligned_cols=180 Identities=17% Similarity=0.190 Sum_probs=144.3
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCe-EE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEG-VY 87 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G-~Y 87 (785)
.-.+|.|...+..+.+.+|++++|.|.+.|.|.+.+.|++++..+..... .......++|.|.+++.+|+| .|
T Consensus 155 ~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~------~~~~~~~~~L~i~~v~~~D~G~~Y 228 (347)
T 2ifg_A 155 SCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM------KSGGLPSLGLTLANVTSDLNRKNV 228 (347)
T ss_dssp TCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC------CCCCSSEEEEEEESCCSTTTTCCE
T ss_pred cCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc------cceecccceEEEeeCChHHCCCeE
Confidence 34589999999999999999999999999999999999999865432211 111223467999999999999 99
Q ss_pred EEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEE----e-
Q psy2775 88 TVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITS----E- 162 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~----~- 162 (785)
+|.|.|..|.....+.|.|. .+|.+ ......+|+.+.|.|.+.|.|.|.|+|+++|..+....... .
T Consensus 229 ~C~a~n~~g~~~~~~~l~V~----~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~ 300 (347)
T 2ifg_A 229 TCWAENDVGRAEVSVQVNVS----FPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEP 300 (347)
T ss_dssp EECCEETTEECCEEECCCCB----EEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCC
T ss_pred EEEEEcCCCCEEEEEEEEEc----CCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEee
Confidence 99999999887777666665 45554 11234578999999999999999999999999987542211 1
Q ss_pred -----CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeec
Q psy2775 163 -----KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDP 202 (785)
Q Consensus 163 -----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 202 (785)
....+|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 301 ~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 301 AANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp CTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCC
T ss_pred cCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecC
Confidence 2356899999999999999999999999998888888863
No 171
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.85 E-value=3.2e-21 Score=185.77 Aligned_cols=174 Identities=19% Similarity=0.260 Sum_probs=128.6
Q ss_pred ccCCCeEEecCCcEEEEEEEeCC-----CceEEEEE----------------CCEEccc-----CCCEEEEE---eCcEE
Q psy2775 420 VPLQDVKVSRDEKASFEIELTKG-----DALVKWYK----------------DGKEIAF-----SENVTLSI---DGKKQ 470 (785)
Q Consensus 420 ~~~~~~~v~~g~~~~l~C~~~~~-----~~~i~W~~----------------~~~~~~~-----~~~~~~~~---~~~~~ 470 (785)
.++..+.+.+|++++|.|.+.+. .+.+.|++ ++..+.. ..+..+.. .....
T Consensus 5 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 84 (214)
T 3jz7_A 5 TPEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDA 84 (214)
T ss_dssp -CEEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBC
T ss_pred cCCceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcc
Confidence 34456778999999999999873 36899998 4444321 33444432 11345
Q ss_pred EEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccc
Q psy2775 471 KLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPT 549 (785)
Q Consensus 471 ~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 549 (785)
.|.|.+++.+|+|.|+|.|.|. |.....+.|.|..++.
T Consensus 85 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~----------------------------------------- 123 (214)
T 3jz7_A 85 SINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPS----------------------------------------- 123 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCB-----------------------------------------
T ss_pred cEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCC-----------------------------------------
Confidence 7999999999999999999997 7677788899887632
Q ss_pred cCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEE-ecCCCCceEEEeCC--EEecCCCCeeEEeeCCeEEEEEccCCCCCC
Q psy2775 550 CPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKV-KASPAPSIVWFRNN--KPLLSSPKKREIFDGENIILELKEADSETD 626 (785)
Q Consensus 550 ~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~--~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d 626 (785)
+........+.+|+.++|.|.+ .|.|.|.|.|+|++ ..+..... ......+|.|.++.. +|
T Consensus 124 -----------~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~----~~~~~~~L~i~~~~~-~d 187 (214)
T 3jz7_A 124 -----------GTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWL----AEMTSPVISVKNASS-EY 187 (214)
T ss_dssp -----------SCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGG----GGTTSSEEEECSCCG-GG
T ss_pred -----------CceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccce----eccCCCEEEEecCCH-HH
Confidence 1111224457889999999999 89999999999954 33322111 122334799999999 99
Q ss_pred ceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 627 AGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 627 ~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+|.|+|.|.|..|....++.|.|.
T Consensus 188 ~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 188 SGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp CEEEEEEEECSSCEEEEEEEECCB
T ss_pred CEEEEEEEEcCCCcEEEEEEEEEe
Confidence 999999999999999888877775
No 172
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.85 E-value=2.2e-20 Score=173.19 Aligned_cols=163 Identities=17% Similarity=0.218 Sum_probs=123.2
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeC-CCce-EEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTK-GDAL-VKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT 492 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 492 (785)
+|.+...+....+.+|+.++|.|.+.+ +.+. +.|++++..+... ...|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~~----------~~~L~i~~~~~~d~G~Y~C~~~n~ 76 (175)
T 1fnl_A 7 KAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ----------ASSYFIDAATVNDSGEYRCQTNLS 76 (175)
T ss_dssp CCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEESS----------CSEEEESSCCGGGCEEEEEECSSS
T ss_pred CCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccCC----------ceEEEEeCCCcccCEEEEEEeeCC
Confidence 456666667778999999999999988 4444 8999999887532 237999999999999999999985
Q ss_pred CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeee
Q psy2775 493 GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKE 572 (785)
Q Consensus 493 g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~ 572 (785)
.....+.|.|..++ .++. .....+.+
T Consensus 77 -~~s~~~~l~V~~~~----------------------------------------------------~~~~-~~~~~~~~ 102 (175)
T 1fnl_A 77 -TLSDPVQLEVHIGW----------------------------------------------------LLLQ-APRWVFKE 102 (175)
T ss_dssp -CCCCCEEEEEECSS----------------------------------------------------EEEE-CSCSEEET
T ss_pred -cccccEEEEEeCCC----------------------------------------------------ceee-CCCceecC
Confidence 22456777776432 1111 12346788
Q ss_pred cCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcc-eEEEEEEEEE
Q psy2775 573 KGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGS-ATHGARVTVD 650 (785)
Q Consensus 573 g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~ 650 (785)
|+.++|.|.+.|.|++ .+.|+|+|..+.. ......|.|.++.. +|+|.|+|.|.|..|. .+..+.|.|.
T Consensus 103 g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~--------~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 103 EDPIHLRCHSWKNTALHKVTYLQNGKDRKY--------FHHNSDFHIPKATL-KDSGSYFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp TCCEEEEEEECTTCCCEEEEEEETTEEEEE--------EEECCCEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred CCCEEEEEEcCCCCCceEEEEEECCeEccC--------CCCCCEEEEcccCh-hhCeEEEEEEEcCCCCccCccEEEEEe
Confidence 9999999999988665 9999999998732 12245699999999 9999999999997664 3334555554
No 173
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=8.5e-20 Score=171.02 Aligned_cols=163 Identities=19% Similarity=0.286 Sum_probs=128.9
Q ss_pred ceEecCCCeEEEEEEEEecCCC--eeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEEcCCeeE
Q psy2775 21 PVYAEENSEVTLEVRLVAVPEP--DLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAKNREGEA 98 (785)
Q Consensus 21 ~~~v~~G~~v~l~C~~~g~p~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~ 98 (785)
...+.+|++++|.|.+.+.|.+ .+.|++++..+...... .....|.|. +.+|+|.|+|.|.|...
T Consensus 7 ~~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~---------~~~~~l~i~--~~~d~G~Y~C~~~n~~~-- 73 (184)
T 3b5h_A 7 TTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP---------GQKTEFKVD--SDDQWGEYSCVFLPEPM-- 73 (184)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC---------CSEEEEEEC--GGGCCEEEEEEEESTTS--
T ss_pred EEEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc---------CCcEEEEEe--chhhCeEEEEEEECCcC--
Confidence 3677899999999999887776 89999999887654321 112457776 68999999999998432
Q ss_pred EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccC-CCeEEEeE---CC-EEccc---c--eEEEeCCEEEE
Q psy2775 99 KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEP-SPKVEWYK---DG-KLIKD---R--QITSEKNTHTL 168 (785)
Q Consensus 99 ~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p-~~~v~W~~---~g-~~~~~---~--~~~~~~~~~~L 168 (785)
..+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.| .+.+.|++ ++ ..+.. . .+........|
T Consensus 74 -~~~~l~V~----~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 148 (184)
T 3b5h_A 74 -GTANIQLH----GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSEL 148 (184)
T ss_dssp -CEEEEEEC----CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEE
T ss_pred -cEEEEEEe----cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEE
Confidence 44566775 577777777778899999999999999999 78999999 44 44432 1 23344566789
Q ss_pred EEcccC-CCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 169 TLIQCS-TKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 169 ~i~~~~-~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
.|.++. .+|+|.|+|.|.|..|.....+.|.|.
T Consensus 149 ~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 149 HIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEeeccccccCceEEEEEEeCCCcceEEEEEEEe
Confidence 999999 899999999999999999988888885
No 174
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.84 E-value=2.3e-20 Score=176.77 Aligned_cols=168 Identities=15% Similarity=0.124 Sum_probs=128.4
Q ss_pred CCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEE--EeCCEEEEEEcccCCCCcEEEEEEEEcCC
Q psy2775 112 EKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQIT--SEKNTHTLTLIQCSTKDKGRYSVKVTNKE 189 (785)
Q Consensus 112 ~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 189 (785)
.+|.|...+.. .+.+|+.++|.|.+.+ +.+.+.|+|+|..+...... ......+|.|.+++.+|+|.|+|.|.|..
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 56777776666 7899999999999987 67899999999887643221 12456789999999999999999999998
Q ss_pred ee--EEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeE
Q psy2775 190 GT--VESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKV 267 (785)
Q Consensus 190 g~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v 267 (785)
|. .+..+.|.|.... .+|.+...+.. .+.+|+.++|.|.+.+ +++.+
T Consensus 82 g~~~~s~~~~l~V~~~~-----------------------------~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~ 130 (196)
T 3p2t_A 82 GWSQPSDPLELVMTGAY-----------------------------SKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTF 130 (196)
T ss_dssp EEBCCCCCEEEEEECSS-----------------------------CCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEE
T ss_pred cccCCCccEEEEecCCC-----------------------------CCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEE
Confidence 73 2345667775332 34555554443 6789999999999987 45689
Q ss_pred EEEECCEEcccc----eEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy2775 268 EWYKDGKLIKDR----QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEG 312 (785)
Q Consensus 268 ~W~~~~~~l~~~----~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g 312 (785)
.|+++|..+... ..........|.|.+++.+|+|.|+|.|.|..+
T Consensus 131 ~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 131 LLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred EEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 999999876522 112233456899999999999999999999865
No 175
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.84 E-value=3.8e-20 Score=175.59 Aligned_cols=172 Identities=12% Similarity=0.172 Sum_probs=118.4
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecC-
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTG- 493 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g- 493 (785)
+|.+...+. ..+.+|++++|.|.+.+.++.+.|+|++..+........ .......|.|.+++.+|+|.|+|.|.|..
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 82 (198)
T 1ugn_A 5 KPTLWAEPG-SVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQ-ELVKKGQFPIPSITWEHTGRYRCYYGSDTA 82 (198)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEECCTTCCCEEEEESSSCCHHHHTSCH-HHHTTTEEEESSCCGGGCEEEEEEEEETTT
T ss_pred CCeEeccCC-CcccCCCcEEEEEEecCCCcEEEEEECCccccccccccc-cCCcccEEEECCCCHHHCeEEEEEEECCCC
Confidence 456655555 378899999999999886668999999987642111000 01122479999999999999999999953
Q ss_pred ---cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeee
Q psy2775 494 ---DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTV 570 (785)
Q Consensus 494 ---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 570 (785)
..+..+.|.|...+. +|.+... ....+
T Consensus 83 g~~~~s~~~~l~V~~~~~-------------------------------------------------~p~i~~~-~~~~v 112 (198)
T 1ugn_A 83 GRSESSDPLELVVTGAYI-------------------------------------------------KPTLSAQ-PSPVV 112 (198)
T ss_dssp EECCCCCCEEEEEECSSC-------------------------------------------------CCEEEEE-SCSEE
T ss_pred CcccCCccEEEEEccccc-------------------------------------------------CCccccC-Ccccc
Confidence 334567788876321 1333222 23578
Q ss_pred eecCeEEEEEEEecCCCCceEEEeCCEEecCCCCee-EEe-eCCeEEEEEccCCCCCCceeEEEEEEcCCcc
Q psy2775 571 KEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKR-EIF-DGENIILELKEADSETDAGDYKVVATNELGS 640 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~-~~~-~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~ 640 (785)
.+|++++|.|.+.|. .|.|.|+|+|..+....... ... .+....|.|.++.. +|+|.|+|.|.|..+.
T Consensus 113 ~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~~~ 182 (198)
T 1ugn_A 113 NSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSP-SRRWWYRCYAYDSNSP 182 (198)
T ss_dssp ETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCT-TSCEEEEEEEECTTST
T ss_pred CCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCc-ccCeEEEEEEEeCCCC
Confidence 899999999999998 78999999998874332211 111 22457899999999 9999999999999763
No 176
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.84 E-value=2e-20 Score=172.71 Aligned_cols=164 Identities=16% Similarity=0.224 Sum_probs=127.5
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecC-CCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVP-EPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
.+|.|...|..+.+.+|++++|.|.+.+.| .+.+.|++++..+..... .+.|.+++.+|+|.|+|
T Consensus 3 p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~--------------~~~~~~~~~~d~G~Y~C 68 (170)
T 3ry4_A 3 PKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ--------------PSYRFKANNNDSGEYTC 68 (170)
T ss_dssp CBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS--------------SEEEEECCGGGCEEEEE
T ss_pred CCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc--------------ceEEEecccccCeEEEE
Confidence 357778888889999999999999998876 578999999998865422 16678999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcccceEEEeCCEEEE
Q psy2775 90 VAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIKDRQITSEKNTHTL 168 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L 168 (785)
.+.+.... ..+.|.|.. +|.+... ....+.+|+.+.|.|.+ .+.|.+.+.|+++|..+.. ......|
T Consensus 69 ~~~~~~~s--~~~~l~v~~----~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~-----~~~~~~L 136 (170)
T 3ry4_A 69 QTGQTSLS--DPVHLTVLF----EWLVLQT-PHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF-----SHLDPTF 136 (170)
T ss_dssp EETTSBCC--CCEEEEEEC----CSEEEEC-SCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE-----ESSCCEE
T ss_pred EEeCCCce--EeEEEEEEC----CceEecC-CCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc-----cCCCCeE
Confidence 99976543 345566652 3444333 35678899999999999 4556689999999988642 2334579
Q ss_pred EEcccCCCCcEEEEEEEEcCCee-EEEEEEEEe
Q psy2775 169 TLIQCSTKDKGRYSVKVTNKEGT-VESAANLNV 200 (785)
Q Consensus 169 ~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 200 (785)
.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 137 ~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 137 SIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 99999999999999999999986 333455555
No 177
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.84 E-value=3.7e-21 Score=179.99 Aligned_cols=161 Identities=13% Similarity=0.115 Sum_probs=123.1
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..+|.|...|.. .+.+|++++|.|.+.+ +.+.+.|+|++... .... ..|.|.+++.+|+|.|+|
T Consensus 6 ~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~~~~------~~L~i~~v~~~D~G~Y~C 69 (184)
T 2gi7_A 6 LPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------YQDQ------AVLFIPAMKRSLAGRYRC 69 (184)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------EESS------SEEEESSCCGGGCEEEEE
T ss_pred CCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------cCcc------cEEEECcCChhhCceEEE
Confidence 367888888875 8999999999999877 77899999998651 1111 349999999999999999
Q ss_pred EEEcCCeeE--EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEE
Q psy2775 90 VAKNREGEA--KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHT 167 (785)
Q Consensus 90 ~a~~~~~~~--~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 167 (785)
.|.|..+.. +..+.|.|.. ...+|.+...+ ...+.+|+.+.|.|.+.+. ++.+.|+|+|..+.... ........
T Consensus 70 ~a~n~~g~~~~s~~~~l~V~~-~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~~~-~~~~~~~~ 145 (184)
T 2gi7_A 70 SYQNGSLWSLPSDQLELVATG-VFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPYKN-PERWYRAS 145 (184)
T ss_dssp EEEETTEEBCCCCCEEEEEES-SSCCCEEEEEC-CCSSCCTTCEEEEEECSSC-CCEEEEEECCCCTTSCC-CCEEEEES
T ss_pred EEEcCCCccCCCCCEEEEecC-cCCCCEEEeCC-CceecCCCcEEEEEEcCCC-CcEEEEEECCCcCccee-cCCCceEE
Confidence 999987632 2345566643 23456666554 4567899999999998755 46999999998876421 12223557
Q ss_pred EEEcccCCCCcEEEEEEEEcCCe
Q psy2775 168 LTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
|.|.+++.+|+|.|+|.|.|..+
T Consensus 146 L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 146 FPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SSEEEETTCCSEEEEEEEECTTS
T ss_pred EEEccCCccCCeEEEEEEEeCCC
Confidence 99999999999999999999754
No 178
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.84 E-value=4.6e-20 Score=176.73 Aligned_cols=176 Identities=15% Similarity=0.279 Sum_probs=132.2
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC-------------------CCCEEEeecCCccceEEEEE
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE-------------------TDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~L~ 75 (785)
|...+..+.+.+|++++|.|.+.+.+.+.+.|++++..... ..+..+..+ .+|.
T Consensus 2 ~~i~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~-------~~L~ 74 (208)
T 3r4d_A 2 VTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSN-------GSLL 74 (208)
T ss_dssp CEEEEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTT-------SCEE
T ss_pred ccccCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecC-------CeEE
Confidence 34455668899999999999987888889999997643221 112222111 2499
Q ss_pred EcccCCCCCeEEEEEEEcCC-eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEc
Q psy2775 76 IKSIKKREEGVYTVVAKNRE-GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLI 154 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~-~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~ 154 (785)
|.+++.+|+|.|+|.+.+.. +.....+.|.|.. .+..|.+...... +..|+.+.|.|.+.+.| +.+.|+++|..+
T Consensus 75 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l 150 (208)
T 3r4d_A 75 FQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQ-PVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSL 150 (208)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEC-CCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEEC
T ss_pred EccccccCCeEEEEEEEcccCceeEEEEEEEecc-CCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeC
Confidence 99999999999999999985 5666677777763 3344666555444 88999999999998866 799999999998
Q ss_pred ccc-eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE-EEEEee
Q psy2775 155 KDR-QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVD 201 (785)
Q Consensus 155 ~~~-~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~ 201 (785)
... .........+|.|.++..+|+|.|+|.|.|..|...+. ++|.|.
T Consensus 151 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 151 QLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp CCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred CCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 754 23333344689999999999999999999999976653 666654
No 179
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.84 E-value=6.5e-21 Score=176.37 Aligned_cols=153 Identities=17% Similarity=0.200 Sum_probs=114.6
Q ss_pred eEEecCCcEEEEEE-Ee--CCCceEEEEECCEEcc----------cCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEee
Q psy2775 425 VKVSRDEKASFEIE-LT--KGDALVKWYKDGKEIA----------FSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 425 ~~v~~g~~~~l~C~-~~--~~~~~i~W~~~~~~~~----------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
+.+.+|++++|.|. .. .+.+.|.|+|++..+. ...++.+..++ .|.|.+++.+|+|.|+|.|.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~g---sL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTTS---CEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCCC---cEEEcccccccCEEEEEEEEe
Confidence 45779999999994 33 2456799999997542 34455553333 499999999999999999999
Q ss_pred c-Ccc--eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeee
Q psy2775 492 T-GDK--ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEK 568 (785)
Q Consensus 492 ~-g~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~ 568 (785)
. |.. ...+.|.|..++. .|.+.
T Consensus 83 ~~g~~~~~~~~~l~V~~~~~-------------------------------------------------~p~i~------ 107 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMVS-------------------------------------------------KPMIY------ 107 (176)
T ss_dssp TTCCEEEEEEEEEEEECCCC-------------------------------------------------CCEEE------
T ss_pred CCCCEEEEEEEEEEEeCCCC-------------------------------------------------CCEEE------
Confidence 7 665 5567777765421 02221
Q ss_pred eeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEE
Q psy2775 569 TVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVT 648 (785)
Q Consensus 569 ~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 648 (785)
..+..++|.|.+.|.|.|.|+|+|+|..+..+.+ +.|.++.. +|+|.|+|.|.|..|...+.+.|.
T Consensus 108 --~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~~i~~~~~-~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 108 --WECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWT-NLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp --EETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------SEEEEECS-CCSSCEEEEEEETTEEEEEEECCC
T ss_pred --ecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------EEEEEEEc-cCCeEEEEEEEecCCCceeccccc
Confidence 2245699999999999999999999998864433 34446667 999999999999999988877665
Q ss_pred E
Q psy2775 649 V 649 (785)
Q Consensus 649 V 649 (785)
+
T Consensus 174 ~ 174 (176)
T 1hng_A 174 C 174 (176)
T ss_dssp C
T ss_pred C
Confidence 4
No 180
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.84 E-value=9.4e-21 Score=181.93 Aligned_cols=167 Identities=13% Similarity=0.042 Sum_probs=121.1
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEE--EEEEccCCCCCcEEEEEEEeec
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQ--KLIIFSAGLEDAGEYSCRVGDT 492 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~ 492 (785)
+|.+...+. ..+.+|++++|.|.+.++.+.+.|+|+|..+...... ........ .|.|.+++.+|+|.|+|.|.|.
T Consensus 9 ~P~i~~~p~-~~v~~G~~vtL~C~~~~~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 86 (218)
T 1uct_A 9 MPFISAKSS-PVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQCQYRIG 86 (218)
T ss_dssp CCCEEESSC-SEEETTCCEEEEECCCTTCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEecCC-CccCCCCCEEEEEEcCCCCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEEEEEEcC
Confidence 455655555 4788999999999998888899999998765432221 10111223 7999999999999999999996
Q ss_pred -Ccc--eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeee
Q psy2775 493 -GDK--ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKT 569 (785)
Q Consensus 493 -g~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 569 (785)
|.. +....|.|.+... +|.+...+ ...
T Consensus 87 ~~~~~~s~~~~l~V~~~~~-------------------------------------------------~P~i~~~p-~~~ 116 (218)
T 1uct_A 87 HYRFRYSDTLELVVTGLYG-------------------------------------------------KPFLSADR-GLV 116 (218)
T ss_dssp TTEEEECCCEEEEEECSSC-------------------------------------------------CCEEEESS-CSE
T ss_pred CCceeecCCEEEEEcCccc-------------------------------------------------CCEEEeCC-CCc
Confidence 432 3346667765210 14443322 457
Q ss_pred eeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCC
Q psy2775 570 VKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 570 v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~ 638 (785)
+.+|++++|.|.+.+.|.+.+.|+|+|..+... .........|.|.+++. +|+|.|+|.|.|..
T Consensus 117 v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~n~~ 180 (218)
T 1uct_A 117 LMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----HQSGEHPANFSLGPVDL-NVSGIYRCYGWYNR 180 (218)
T ss_dssp ECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----EEECSSSEEEECCSCCG-GGCEEEEEEEECTT
T ss_pred cCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----ccCCCccCEEEEccCCc-ccCEEEEEEEEcCC
Confidence 889999999998778888999999999877541 12334567899999999 99999999999864
No 181
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.84 E-value=2.8e-20 Score=172.74 Aligned_cols=164 Identities=18% Similarity=0.246 Sum_probs=122.9
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeCC-C-ceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEee
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTKG-D-ALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~~-~-~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
.+|.+...+....+.+|++++|.|.+.+. . ..+.|++++..+... ...|.|.+++.+|+|.|+|.|.|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcCC
Confidence 35667777777889999999999999874 3 359999999987542 24799999999999999999998
Q ss_pred cCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeee
Q psy2775 492 TGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVK 571 (785)
Q Consensus 492 ~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~ 571 (785)
.. ....+.|.|..++ .+. ......+.
T Consensus 73 ~~-~s~~~~l~V~~~~----------------------------------------------------~~~-~~~~~~~~ 98 (176)
T 1f2q_A 73 VN-ESEPVYLEVFSDW----------------------------------------------------LLL-QASAEVVM 98 (176)
T ss_dssp SS-CCCCEEEEEECSS----------------------------------------------------EEE-EESCSEEE
T ss_pred cc-ccccEEEEEeCcc----------------------------------------------------eee-cCCcceee
Confidence 52 2345667776331 111 11234678
Q ss_pred ecCeEEEEEEEe-cCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcce-EEEEEEEE
Q psy2775 572 EKGTIRLMAKVK-ASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSA-THGARVTV 649 (785)
Q Consensus 572 ~g~~v~l~C~~~-g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V 649 (785)
+|+.++|.|.+. |.|.+.+.|+|+|..+... .....|.|.++.. +|+|.|+|.|.|..|.. ...+.|.|
T Consensus 99 ~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~~s~~~~l~V 169 (176)
T 1f2q_A 99 EGQPLFLRCHGWRNWDVYKVIYYKDGEALKYW--------YENHNISITNATV-EDSGTYYCTGKVWQLDYESEPLNITV 169 (176)
T ss_dssp TTSCEEEEEEEGGGCCEEEEEEEETTEECCSC--------CCSSEEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCEEEEEEecCCCCceEEEEEECCEEEeee--------cCCCeEEECCCCc-ccCEEEEEEEEeCCcceEecCEEEEE
Confidence 999999999995 6677899999999988432 2345799999999 99999999999975543 33355555
Q ss_pred E
Q psy2775 650 D 650 (785)
Q Consensus 650 ~ 650 (785)
.
T Consensus 170 ~ 170 (176)
T 1f2q_A 170 I 170 (176)
T ss_dssp E
T ss_pred e
Confidence 4
No 182
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.84 E-value=8.1e-21 Score=179.83 Aligned_cols=178 Identities=10% Similarity=0.078 Sum_probs=120.0
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
+|.|...+. ..+.+|++++|.|.+.|.|. .+.|+|+|..+..... ..........|.|.+++. +|+|.|+|.|.|.
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 5 KATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTE-HHAGRYRCYYYSP 80 (196)
T ss_dssp BCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCG-GGCEEEEEEEEET
T ss_pred CCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCCh-hHCeEEEEEEeCC
Confidence 477877665 48999999999999998876 9999999987743211 111234567899999999 9999999999999
Q ss_pred CcceEE--EEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeEEEE
Q psy2775 638 LGSATH--GARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKIE 715 (785)
Q Consensus 638 ~g~~~~--~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~ 715 (785)
.|.... .+.|.|.. . ..+|.+... ....+.+|++++|.
T Consensus 81 ~g~~~~s~~~~l~V~~--~------------------------------------~~~p~i~~~--~~~~v~~G~~v~L~ 120 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTG--F------------------------------------YNKPTLSAL--PSPVVTSGENVTLQ 120 (196)
T ss_dssp TEECBCCCCEEEEEEC--S------------------------------------SCCCEEEC-------------CEEE
T ss_pred CCcCCcCccEEEEecC--C------------------------------------CCCCeEEcc--CCccccCCCcEEEE
Confidence 875443 35555541 1 123444332 12357899999999
Q ss_pred EEEecCCCCceEEeECCEEeeeccccc-c--chhhhcccccceeeeeeceEEEEEEecccceeEEeec
Q psy2775 716 VRFKALPPPKAEWTVNGTVIVPSKRVK-G--KAEFIKKLDDLEVKERENAVLEVEVTSDKADVKWFKN 780 (785)
Q Consensus 716 C~~~g~P~p~i~W~~~~~~~~~~~~~~-~--~~~~~~~l~~~~v~~~~~~~~~c~~~~~~~~~~w~~~ 780 (785)
|.+.|.| |.|.|+|+|..+....... . .......|.+..+...|+|.|+|.+.+......|...
T Consensus 121 C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~ 187 (196)
T 2d3v_A 121 CGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHILQVWSEP 187 (196)
T ss_dssp EEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTEEEEECCC
T ss_pred EEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCCCCccCCC
Confidence 9999998 9999999999875432211 1 1112247888899999999999999987766777643
No 183
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=4.6e-20 Score=173.14 Aligned_cols=166 Identities=13% Similarity=0.100 Sum_probs=121.1
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-C
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-G 493 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g 493 (785)
+|.+...+.. .+.+|++++|.|.+.++.+.+.|+|+|..+...... .........|.|.+++.+|+|.|+|.|.|. +
T Consensus 4 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 81 (188)
T 1oll_A 4 KPFIWAEPHF-MVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 81 (188)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTTCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEeecCC-cCCCCCCEEEEEecCCCCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEecCCCC
Confidence 4555555555 788999999999998777789999999876421100 001123468999999999999999999985 3
Q ss_pred c--ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeee
Q psy2775 494 D--KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVK 571 (785)
Q Consensus 494 ~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~ 571 (785)
. .+..+.|.|.+... +|.+...+ ...+.
T Consensus 82 ~~~~s~~~~l~V~~~~~-------------------------------------------------~p~i~~~p-~~~v~ 111 (188)
T 1oll_A 82 WSEPSNLLDLVVTEMYD-------------------------------------------------TPTLSVHP-GPEVI 111 (188)
T ss_dssp ECCCCCCEEEEEESCSC-------------------------------------------------CCEEEEES-CSEEE
T ss_pred CCCCCCceEEEecccCC-------------------------------------------------CCeEEECC-CCccc
Confidence 2 24456777765310 14443322 35688
Q ss_pred ecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCC
Q psy2775 572 EKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 572 ~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~ 638 (785)
+|+.++|.|.+.+ +.+.+.|+|+|..+.. ..........|.|.+++. +|+|.|+|.|.|..
T Consensus 112 ~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 112 SGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTT-AHRGTYRCFGSYNN 172 (188)
T ss_dssp TTCEEEEEEECSS-SCSEEEEEEESSSCEE----EEEECSSEEEEEEEECCG-GGCEEEEEECEEET
T ss_pred cCCEEEEEEEcCC-CCCEEEEEECCccccc----cccCCCceeEEEECCCCc-CCCcEEEEEEEcCC
Confidence 9999999999886 4579999999976643 122345667899999999 99999999999875
No 184
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.83 E-value=1.1e-19 Score=176.62 Aligned_cols=178 Identities=13% Similarity=0.194 Sum_probs=122.1
Q ss_pred cCCceEecCCCeEEEEEEEEecCCC---eeEEEECCEEc-----------cC------CCCEEEeecCCccceEEEEEEc
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVPEP---DLLWYYNGEPL-----------QE------TDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p~~---~i~W~~~~~~~-----------~~------~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
++.++.+.+|++|+|.|.+.+.+.+ .|.|+|++... .. ..+.... .........+|+|.
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~-~~~~~~~~~~L~I~ 88 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSIL-RDGITAGKAALRIH 88 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEE-CTTGGGTEEEEEES
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEe-cccccCCeEEEEEe
Confidence 4567899999999999999876553 69999876321 10 1122222 22223345679999
Q ss_pred ccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCCeEEEeECC-EEcc
Q psy2775 78 SIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSPKVEWYKDG-KLIK 155 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~~v~W~~~g-~~~~ 155 (785)
+++.+|+|.|+|.|.|..+.....+.+.+.. .+........+.+|+.+.|.|.+.| .|.|.|+|++++ ..+.
T Consensus 89 ~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~------~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~ 162 (226)
T 4f80_A 89 NVTASDSGKYLCYFQDGDFYEKALVELKVAA------LGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIP 162 (226)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEB------CCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCC
T ss_pred eCchHHCeeEEEEEECCCcEEEEEEEEeecc------ceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcC
Confidence 9999999999999999998877766666542 1222223556778999999999987 599999999965 4444
Q ss_pred cce--EEEe-CC-EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeec
Q psy2775 156 DRQ--ITSE-KN-THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDP 202 (785)
Q Consensus 156 ~~~--~~~~-~~-~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 202 (785)
... .... .+ -..+.+..++.+|+|.|+|.|.|..|..+..+.|.|.+
T Consensus 163 ~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 163 TVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp CEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred CCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 322 1111 22 23344556788999999999999999999888888853
No 185
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.83 E-value=1.3e-19 Score=175.94 Aligned_cols=175 Identities=17% Similarity=0.204 Sum_probs=116.1
Q ss_pred cCCCeEEecCCcEEEEEEEeCC-C---ceEEEEECCEE-----------ccc------CCCEEEEEe---CcEEEEEEcc
Q psy2775 421 PLQDVKVSRDEKASFEIELTKG-D---ALVKWYKDGKE-----------IAF------SENVTLSID---GKKQKLIIFS 476 (785)
Q Consensus 421 ~~~~~~v~~g~~~~l~C~~~~~-~---~~i~W~~~~~~-----------~~~------~~~~~~~~~---~~~~~L~i~~ 476 (785)
|..++.+.+|++++|.|.+.+. . ..|.|+|++.. +.. ..+...... .+...|.|.+
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 4456788999999999999862 2 26999987632 111 112232221 2357899999
Q ss_pred CCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 477 AGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 477 ~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
++.+|+|.|+|.|.|. |.......+.+..+.
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~------------------------------------------------ 121 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVELKVAALG------------------------------------------------ 121 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC------------------------------------------------
T ss_pred CchHHCeeEEEEEECCCcEEEEEEEEeeccce------------------------------------------------
Confidence 9999999999999996 544443333332221
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEec-CCCCceEEEeCCEEecCCCCeeEEee-CC-eEEEEEccCCCCCCceeEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKA-SPAPSIVWFRNNKPLLSSPKKREIFD-GE-NIILELKEADSETDAGDYKV 632 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P~p~v~W~~~~~~i~~~~~~~~~~~-~~-~~~L~i~~~~~~~d~G~Y~C 632 (785)
........+.+|+.+.|.|.+.| .|.|.|+|+|++..+..........+ ++ ...+.+.+++. +|+|.|+|
T Consensus 122 ------~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~-~d~G~YtC 194 (226)
T 4f80_A 122 ------SDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRG-SSGEGVSC 194 (226)
T ss_dssp ------CCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC-----CEEE
T ss_pred ------ecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEech-hcCcEEEE
Confidence 11112456788999999999998 59999999997654433332222222 22 23445556777 99999999
Q ss_pred EEEcCCcceEEEEEEEEE
Q psy2775 633 VATNELGSATHGARVTVD 650 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V~ 650 (785)
.|+|..|...+++.|.|.
T Consensus 195 ~a~N~~g~~~~~~~v~v~ 212 (226)
T 4f80_A 195 TIRSSLLGLEKTASISIA 212 (226)
T ss_dssp EEEETTTTEEEEEEECCC
T ss_pred EEEeCCCCeEEEEEEEEC
Confidence 999999999998888875
No 186
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.83 E-value=4.7e-20 Score=177.40 Aligned_cols=180 Identities=18% Similarity=0.243 Sum_probs=130.2
Q ss_pred cccccCCCeEEecCCcEEEEEEEeC-CCceEEEEEC--CEEcc------------cCCCEEEEEeCcEEEEEEccCCCCC
Q psy2775 417 EISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKD--GKEIA------------FSENVTLSIDGKKQKLIIFSAGLED 481 (785)
Q Consensus 417 ~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~--~~~~~------------~~~~~~~~~~~~~~~L~i~~~~~~d 481 (785)
.+..++ ...+.+|++++|.|.+.+ +.+.+.|+|. +.... ...++.+........|.|.+++.+|
T Consensus 3 ~v~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 3 TLTQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CBBCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 344555 778999999999999996 6788999982 22111 2346666667778899999999999
Q ss_pred cEEEEEEEeec-C---cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCC
Q psy2775 482 AGEYSCRVGDT-G---DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQ 557 (785)
Q Consensus 482 ~G~Y~C~a~n~-g---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~ 557 (785)
+|.|+|.|.|. + .....+.|.|...+. .
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------------~ 113 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVLGQPN------------------------------------------------A 113 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEECSCC------------------------------------------------B
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEeCCCC------------------------------------------------C
Confidence 99999999997 4 234557787774321 1
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeE-EeeCC----eEEEEEccCCCCCCceeE
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKRE-IFDGE----NIILELKEADSETDAGDY 630 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~-~~~~~----~~~L~i~~~~~~~d~G~Y 630 (785)
+|.+...+....+.+|+.++|.|.+.|. |++ .|.|+|+|..+..+..... ...++ ...|.|.++.. +|+|.|
T Consensus 114 ~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y 192 (213)
T 3mj8_L 114 APSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAW-KSRNTF 192 (213)
T ss_dssp CCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHH-HSCSCE
T ss_pred CCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHc-CCCCEE
Confidence 2455444444455689999999999996 443 9999999999865321100 01222 24599999988 999999
Q ss_pred EEEEEcCCcceEEEEE
Q psy2775 631 KVVATNELGSATHGAR 646 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~~ 646 (785)
+|.|.|..|....++.
T Consensus 193 ~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 193 ICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEEEEETTEEEEEEEC
T ss_pred EEEEEECCccEEeeec
Confidence 9999999987666543
No 187
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.83 E-value=6.4e-20 Score=176.47 Aligned_cols=169 Identities=17% Similarity=0.193 Sum_probs=127.1
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EE---cc---------CCCCEEEeecCCccceEEEEEEcc
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EP---LQ---------ETDEVVFSDQSDMHSYVSIVTIKS 78 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~---~~---------~~~~~~~~~~~~~~~~~~~L~i~~ 78 (785)
|.|...|..+.+.+|++++|.|.+.+.|.+.+.|+|++ .. +. ...++.+...+ ...+|+|.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~ 77 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSG----TDFTLTISD 77 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEECS
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCC----CEEEEEECC
Confidence 67888899999999999999999999889999999843 11 10 12344443222 225699999
Q ss_pred cCCCCCeEEEEEEEcCCe---eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCCeEEEeECCEEc
Q psy2775 79 IKKREEGVYTVVAKNREG---EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSPKVEWYKDGKLI 154 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~~---~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~~v~W~~~g~~~ 154 (785)
++.+|+|.|+|.|.|..+ .......|.|.. ...+|.+........+.+|+.+.|.|.+.| .|.+.|+|+++|..+
T Consensus 78 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~-~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~ 156 (213)
T 3nl4_L 78 LECADAATYYCQSTYENPTYVSFGGGTEVGVKG-DPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQ 156 (213)
T ss_dssp CCGGGCEEEEEEECCSSTTTCEECCCEEEEEEC-CCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEEC
T ss_pred CChHHCEEEEEecCCCCceeEEeCCCeEEEEeC-CCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccC
Confidence 999999999999998766 333445566654 446677766555556678999999999988 898999999999988
Q ss_pred ccce-EEE-----eC----CEEEEEEcccCCCCcEEEEEEEE
Q psy2775 155 KDRQ-ITS-----EK----NTHTLTLIQCSTKDKGRYSVKVT 186 (785)
Q Consensus 155 ~~~~-~~~-----~~----~~~~L~i~~~~~~d~G~Y~C~a~ 186 (785)
.... ... .. ..++|.|.++..+|+|.|+|.|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 157 TTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 6532 000 11 12569999999999999999998
No 188
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.83 E-value=1e-19 Score=175.77 Aligned_cols=181 Identities=12% Similarity=0.124 Sum_probs=130.1
Q ss_pred ecCCceEecCCCeEEEEEEEEecCCC---eeEEEECCEEccCCC------------------CEEEeecCCccceEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVPEP---DLLWYYNGEPLQETD------------------EVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p~~---~i~W~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~L~ 75 (785)
..|..+.|.+|++++|.|.+.+.|.+ .|.|+|++..+.... ++.+... .......+|+
T Consensus 4 ~~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~sL~ 82 (218)
T 4frw_A 4 ETSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPP-PRNPLDGSVL 82 (218)
T ss_dssp ECCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSS-CCCTTBCCEE
T ss_pred eCCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecc-cccCCeEEEE
Confidence 45778999999999999999887765 489999875432211 1111111 1111224599
Q ss_pred EcccCCCCCeEEEEEEEcCCeeEE-EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEc
Q psy2775 76 IKSIKKREEGVYTVVAKNREGEAK-MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLI 154 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~~~~-~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~ 154 (785)
|.+++.+|+|.|.|.+.+..+... ....+.+.. .++..........+..|+.+.|.|.+.|.|++.|+|++++..+
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~ 159 (218)
T 4frw_A 83 LRNAVQADEGEYECRVSTFPAGSFQARLRLRVLV---PPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGT 159 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB---CCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCE
T ss_pred EeeccHHHCCceeEEEEeccCceeeeEEEEEEee---eccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCccc
Confidence 999999999999999987655433 333344432 2333344445677788999999999999999999999999887
Q ss_pred ccceEEEeC----CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 155 KDRQITSEK----NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 155 ~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
......... ..+.|.|.++..+|+|.|+|.|.|..|..+..+.+.|.
T Consensus 160 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v~ 210 (218)
T 4frw_A 160 TSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHILH 210 (218)
T ss_dssp EEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC
T ss_pred ccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEEE
Confidence 655333222 24579999999999999999999999977776666664
No 189
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.83 E-value=1.8e-20 Score=185.53 Aligned_cols=179 Identities=15% Similarity=0.194 Sum_probs=124.2
Q ss_pred ccCCCeEEecCCcEEEEEEEeC----CCceEEEEECCEEcc------------------------------cCCCEEEEE
Q psy2775 420 VPLQDVKVSRDEKASFEIELTK----GDALVKWYKDGKEIA------------------------------FSENVTLSI 465 (785)
Q Consensus 420 ~~~~~~~v~~g~~~~l~C~~~~----~~~~i~W~~~~~~~~------------------------------~~~~~~~~~ 465 (785)
.++..+.+.+|++++|.|.+.+ +.+.+.|++++.... ...+..+..
T Consensus 7 ~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 86 (250)
T 2fbo_J 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN 86 (250)
T ss_dssp CSCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC
T ss_pred cCCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc
Confidence 3445778899999999999984 567899999875421 111222211
Q ss_pred eCcEEEEEEccCCCCCcEEEEEEEeec-Ccc-----eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceee
Q psy2775 466 DGKKQKLIIFSAGLEDAGEYSCRVGDT-GDK-----ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQV 539 (785)
Q Consensus 466 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 (785)
+ ....|.|.+++.+|+|.|+|.|.|. +.. ...+.|.|..++.. +
T Consensus 87 ~-~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~-----~------------------------ 136 (250)
T 2fbo_J 87 L-AAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPS-----N------------------------ 136 (250)
T ss_dssp T-TSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCC-----S------------------------
T ss_pred C-CcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCC-----C------------------------
Confidence 1 1247999999999999999999996 432 34777888764210 0
Q ss_pred EEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCe--eEE---------
Q psy2775 540 KWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKK--REI--------- 608 (785)
Q Consensus 540 ~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~--~~~--------- 608 (785)
...+.......+.+|+.++|.|.+.|.|.|.|+|+|++..+...... ..+
T Consensus 137 -------------------~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (250)
T 2fbo_J 137 -------------------NVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGIT 197 (250)
T ss_dssp -------------------CCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCE
T ss_pred -------------------eEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCcc
Confidence 11112223567788999999999999999999999999887543211 000
Q ss_pred ----------eeCCeEEEEEccCCCCCCceeEEEEEEc---CCcceEEEEEEE
Q psy2775 609 ----------FDGENIILELKEADSETDAGDYKVVATN---ELGSATHGARVT 648 (785)
Q Consensus 609 ----------~~~~~~~L~i~~~~~~~d~G~Y~C~a~n---~~g~~~~~~~l~ 648 (785)
.......|.|.++.. +|+|.|+|.|.| ..|....++.|.
T Consensus 198 ~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~~g~~~~~~~l~ 249 (250)
T 2fbo_J 198 WFSSEIAGRASFSGARNLVIRAAKI-TDAGRVWCELATGQGELDADRSSTILK 249 (250)
T ss_dssp EECTTTTTSEEEETTTEEEECSCCG-GGCEEEEEEEESSSSGGGEEEEEEEEE
T ss_pred ccCceEecccccCCccEEEEecCCc-ccCEEEEEEecCCccccCccceeEEEe
Confidence 011235799999999 999999999999 455555555554
No 190
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.82 E-value=3.1e-20 Score=171.78 Aligned_cols=156 Identities=14% Similarity=0.224 Sum_probs=117.3
Q ss_pred ceEecCCCeEEEEEEEEe--cCCCeeEEEECCEEcc----------CCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 21 PVYAEENSEVTLEVRLVA--VPEPDLLWYYNGEPLQ----------ETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 21 ~~~v~~G~~v~l~C~~~g--~p~~~i~W~~~~~~~~----------~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
.+.+.+|++++|.|...+ .+.+.|.|+|++..+. ...++.+..+ ..|+|.+++.+|+|.|+
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~-------gsL~I~~v~~~D~G~Y~ 77 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILAN-------GDLKIKNLTRDDSGTYN 77 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTT-------SCEEESSCCGGGCEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCC-------CcEEEcccccccCEEEE
Confidence 477899999999994322 4567899999997542 2344444221 13999999999999999
Q ss_pred EEEEcCCeeE--EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEE
Q psy2775 89 VVAKNREGEA--KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTH 166 (785)
Q Consensus 89 C~a~~~~~~~--~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~ 166 (785)
|.|.|..|.. ...+.|.|.. .+..|.+. ..+..+.|.|.+.|.|++.|+|++||..+....
T Consensus 78 C~~~n~~g~~~~~~~~~l~V~~-~~~~p~i~--------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~-------- 140 (176)
T 1hng_A 78 VTVYSTNGTRILNKALDLRILE-MVSKPMIY--------WECSNATLTCEVLEGTDVELKLYQGKEHLRSLR-------- 140 (176)
T ss_dssp EEEEETTCCEEEEEEEEEEEEC-CCCCCEEE--------EETTTTEEEEECSSCSSCEEEEEETTEEEEEES--------
T ss_pred EEEEeCCCCEEEEEEEEEEEeC-CCCCCEEE--------ecCCcEEEEEEecCCCCcEEEEEECCEECCCCC--------
Confidence 9999998876 5667777764 22234332 224569999999999999999999998875431
Q ss_pred EEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 167 TLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 167 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
.+.|.++..+|+|.|+|.|.|..|..+....|.+
T Consensus 141 ~~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 141 QKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp SSEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred cEEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 1456678899999999999999998888776654
No 191
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.82 E-value=1.5e-19 Score=173.92 Aligned_cols=174 Identities=16% Similarity=0.183 Sum_probs=126.3
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE--Ec------------cCCCCEEEeecCCccceEEEEEEccc
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE--PL------------QETDEVVFSDQSDMHSYVSIVTIKSI 79 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~--~~------------~~~~~~~~~~~~~~~~~~~~L~i~~~ 79 (785)
.+...|..+.+.+|++++|.|.+.+.|.+.|.|++++. .+ ....++.+...+ ...+|+|.++
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v 78 (213)
T 3d9a_L 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG----TDFTLSINSV 78 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET----TEEEEEESSC
T ss_pred eEEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCC----CEEEEEECCC
Confidence 45667889999999999999999998888999998532 11 111344443322 1246999999
Q ss_pred CCCCCeEEEEEEEcCCeeEEE-EeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCC-eEEEeECCEEccc
Q psy2775 80 KKREEGVYTVVAKNREGEAKM-DIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVEWYKDGKLIKD 156 (785)
Q Consensus 80 ~~~D~G~Y~C~a~~~~~~~~~-~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~W~~~g~~~~~ 156 (785)
+.+|+|.|+|.|.|..+.... ...|.|.. ...+|.+...........|+.+.|.|.+.| .|++ .++|++||..+..
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 157 (213)
T 3d9a_L 79 ETEDFGMYFCQQSNSWPYTFGGGTKLEIKR-ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 157 (213)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECC-CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred ChhhCEEEEEeeecCCcceeCCCEEEEEec-CCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcc
Confidence 999999999999998765432 33566642 223666665444444457999999999987 5554 8999999998876
Q ss_pred c-eEEE-----eCC----EEEEEEcccCCCCcEEEEEEEEcCCeeE
Q psy2775 157 R-QITS-----EKN----THTLTLIQCSTKDKGRYSVKVTNKEGTV 192 (785)
Q Consensus 157 ~-~~~~-----~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 192 (785)
. .... .++ .++|.|.++..+|+|.|+|.|.|.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 203 (213)
T 3d9a_L 158 GVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 203 (213)
T ss_dssp TEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred eeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCC
Confidence 5 1111 111 3489999999999999999999987553
No 192
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=9.1e-20 Score=178.94 Aligned_cols=220 Identities=13% Similarity=0.087 Sum_probs=126.1
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.+|.|...|. ..|.+|++|+|.|.+.+ +.+.+.|+|++..+.... .............|.|.+++.+|+|.|+|.
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~---~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 80 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLH---LIGEHHDGVSKANFSIGPMMQDLAGTYRCY 80 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEE---EECBCCTTCEEEEEEECSCCTTTCEEEEEE
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcce---eeeeccCCCceEEEEeecCCcccCEEEEEe
Confidence 5788888886 77999999999999864 567899999986542210 100000111236699999999999999999
Q ss_pred EEcCCe-----eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceE--E--E
Q psy2775 91 AKNREG-----EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQI--T--S 161 (785)
Q Consensus 91 a~~~~~-----~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~--~--~ 161 (785)
+.+... ..+..+.|.|.. ...+|.+...+. ..+.+|+.++|.|.+.+. .+.+.|+|+|..+..... . .
T Consensus 81 a~~~~~~~~~s~~S~~~~L~V~~-~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~ 157 (257)
T 1b6u_A 81 GSVTHSPYQLSAPSDPLDIVITG-LYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVN 157 (257)
T ss_dssp EECSSCTTSCCCCCCCEEEEEEC-SSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSS
T ss_pred EeccCCCccccccCCCEEEeccc-CCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccC
Confidence 986421 223445666653 234667765544 467899999999998765 469999999987653211 1 1
Q ss_pred eCCEEEEEEcccCCCCcEEEEEEEEcCCe-----eEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCC
Q psy2775 162 EKNTHTLTLIQCSTKDKGRYSVKVTNKEG-----TVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKP 236 (785)
Q Consensus 162 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 236 (785)
......|.|.+++ |+|.|+|.|.+... ..+..+.|.|...+
T Consensus 158 ~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p-------------------------------- 203 (257)
T 1b6u_A 158 GTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP-------------------------------- 203 (257)
T ss_dssp SCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC--------------------------------
T ss_pred CceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccC--------------------------------
Confidence 1235789999998 99999999997532 22334566665332
Q ss_pred eeeec-CCcceeCCCCeEEEEEEEccCCCCeEEEEECC
Q psy2775 237 SILEP-LHDVSITEGESAVLSVQVGGEPSPKVEWYKDG 273 (785)
Q Consensus 237 ~~~~~-~~~~~~~~G~~~~l~C~~~g~p~~~v~W~~~~ 273 (785)
.+..+ +.......|..+.|.|.+ |.+.+.|.|...+
T Consensus 204 ~~~~p~~~~~~~~~g~~~~l~~~~-~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 204 SNSWPSPTEPSSETGNPRHLHAAA-EQKLISEEDLNLD 240 (257)
T ss_dssp --------------------------------------
T ss_pred CCCCCCCcccCccCCCeEEEEEEE-cchHHHHHHhhhh
Confidence 11111 112235568889999887 5677889998754
No 193
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.82 E-value=1.9e-19 Score=174.50 Aligned_cols=178 Identities=17% Similarity=0.175 Sum_probs=123.0
Q ss_pred ccCCCeEEecCCcEEEEEEEeC-C-----CceEEEEECCEEccc---------------CCCEEEEEe---CcEEEEEEc
Q psy2775 420 VPLQDVKVSRDEKASFEIELTK-G-----DALVKWYKDGKEIAF---------------SENVTLSID---GKKQKLIIF 475 (785)
Q Consensus 420 ~~~~~~~v~~g~~~~l~C~~~~-~-----~~~i~W~~~~~~~~~---------------~~~~~~~~~---~~~~~L~i~ 475 (785)
.++..+.+.+|+++.|.|.+.+ + .+.+.|++++..+.. ..+..+..+ .....|.|.
T Consensus 6 ~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~ 85 (222)
T 3sbw_C 6 VPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQIT 85 (222)
T ss_dssp CSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEES
T ss_pred cCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEc
Confidence 3456677889999999999865 3 347999997643211 123333221 235689999
Q ss_pred cCCCCCcEEEEEEEeecCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 476 SAGLEDAGEYSCRVGDTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
+++.+|+|.|+|.|.|.+.....+.|.|..++..
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~~---------------------------------------------- 119 (222)
T 3sbw_C 86 DVKLQDAGVYRCMISYGGADYKRITVKVNAPYNK---------------------------------------------- 119 (222)
T ss_dssp SCCGGGCEEEEEEEESSSEEEEEEEEEEEBCCCC----------------------------------------------
T ss_pred CcccccCeEEEEEEEeCCCceeEEEEEEECCCCC----------------------------------------------
Confidence 9999999999999999666666788888865321
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeC-CEEecCCCCeeEEee--CCeEEEEEccCCCCCCceeEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRN-NKPLLSSPKKREIFD--GENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~-~~~i~~~~~~~~~~~--~~~~~L~i~~~~~~~d~G~Y~C 632 (785)
|... ....+.+|+.++|.|.+.|+|.|.|.|+++ +..+........... +....+.+..+.. +|+|.|+|
T Consensus 120 ---~~~~---~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~-~d~g~Y~C 192 (222)
T 3sbw_C 120 ---INQR---ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINT-TTNEIFYC 192 (222)
T ss_dssp ---CEEE---EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEEC-CTTCEEEE
T ss_pred ---CCce---eeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEec-cCCcEEEE
Confidence 1110 122567899999999999999999999998 555543222111111 1111222224456 89999999
Q ss_pred EEEcCCcceEEEEEEEEE
Q psy2775 633 VATNELGSATHGARVTVD 650 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V~ 650 (785)
.|.|..|....++.|.|.
T Consensus 193 ~a~n~~g~~~~~~~l~v~ 210 (222)
T 3sbw_C 193 TFRRLDPEENHTAELVIP 210 (222)
T ss_dssp EEEETTTTEEEEEEEECC
T ss_pred EEEeCccceeeEEEEEec
Confidence 999999999998888876
No 194
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.82 E-value=3e-19 Score=171.51 Aligned_cols=176 Identities=14% Similarity=0.111 Sum_probs=125.5
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecC---CCeeEEEECC--EEc------------cCCCCEEEeecCCccceEEEEEE
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVP---EPDLLWYYNG--EPL------------QETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p---~~~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~L~i 76 (785)
.+.. |..+.+.+|++++|.|.+.+.| .+.|.|++++ ..+ ....++.+...+ ....|+|
T Consensus 3 ~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I 77 (212)
T 1q0x_L 3 VVTQ-ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIG----DKAALTI 77 (212)
T ss_dssp CEEE-CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEET----TEEEEEE
T ss_pred eEEC-CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeC----CEEEEEE
Confidence 3556 8899999999999999998877 4789999863 221 112344433321 1256999
Q ss_pred cccCCCCCeEEEEEEEcCCeeEE-EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCC--eEEEeECCEE
Q psy2775 77 KSIKKREEGVYTVVAKNREGEAK-MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSP--KVEWYKDGKL 153 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~~~~-~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~--~v~W~~~g~~ 153 (785)
.+++.+|+|.|+|.|.+..+... ....|.|......+|.+...........|+.+.|.|.+.|.+++ .|+|++||..
T Consensus 78 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~ 157 (212)
T 1q0x_L 78 TGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTP 157 (212)
T ss_dssp SSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEe
Confidence 99999999999999999876432 33456665433356777654444445679999999999885433 8999999998
Q ss_pred cccceE----E-EeC----CEEEEEEcccCCCCcEEEEEEEEcCCeeEEE
Q psy2775 154 IKDRQI----T-SEK----NTHTLTLIQCSTKDKGRYSVKVTNKEGTVES 194 (785)
Q Consensus 154 ~~~~~~----~-~~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 194 (785)
+..... . ..+ ....|.|.....+|+|.|+|.|.|.......
T Consensus 158 l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 158 VTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp ECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred CCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 865421 1 111 1346899999999999999999998765443
No 195
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.82 E-value=1.3e-19 Score=167.24 Aligned_cols=161 Identities=19% Similarity=0.335 Sum_probs=120.6
Q ss_pred CcccccCCCeEEecCCcEEEEEEEeCC--CceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecC
Q psy2775 416 PEISVPLQDVKVSRDEKASFEIELTKG--DALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTG 493 (785)
Q Consensus 416 ~~~~~~~~~~~v~~g~~~~l~C~~~~~--~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g 493 (785)
|.+...+....+.+|+.+.|.|.+.+. .+.+.|++++..+..... .+.+.+++.+|+|.|+|.|.|.
T Consensus 5 p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~~- 73 (170)
T 3ry4_A 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQT- 73 (170)
T ss_dssp CEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETTS-
T ss_pred CEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeCC-
Confidence 444455666678999999999999884 568999999999865432 3667789999999999999984
Q ss_pred cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeec
Q psy2775 494 DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEK 573 (785)
Q Consensus 494 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g 573 (785)
.....+.|.|..++. +. ......+.+|
T Consensus 74 ~~s~~~~l~v~~~~~----------------------------------------------------~~-~~~~~~~~~g 100 (170)
T 3ry4_A 74 SLSDPVHLTVLFEWL----------------------------------------------------VL-QTPHLEFQEG 100 (170)
T ss_dssp BCCCCEEEEEECCSE----------------------------------------------------EE-ECSCSEECTT
T ss_pred CceEeEEEEEECCce----------------------------------------------------Ee-cCCCceeecC
Confidence 233456777766421 11 1113467889
Q ss_pred CeEEEEEEE-ecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcc-eEEEEEEEE
Q psy2775 574 GTIRLMAKV-KASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGS-ATHGARVTV 649 (785)
Q Consensus 574 ~~v~l~C~~-~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~V 649 (785)
+.++|.|.+ .|.|.+.+.|+|+|..+.. ......|.|.++.. +|+|.|+|.|.|..|. ....+.|.|
T Consensus 101 ~~~~l~C~~~~~~p~~~~~W~~~g~~~~~--------~~~~~~L~i~~v~~-~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 101 ETIMLRCHSWKDKPLVKVTFFQNGKSQKF--------SHLDPTFSIPQANH-SHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp CCEEEEEEEGGGCCEEEEEEEETTEEEEE--------ESSCCEEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CeEEEEEECCCCCCCceEEEEECCeEccc--------cCCCCeEEEEeccc-cCCEEEEEEEEeCcCccccccEEEEE
Confidence 999999999 4567789999999988642 22345699999999 9999999999999996 333345544
No 196
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.82 E-value=1e-19 Score=174.71 Aligned_cols=177 Identities=17% Similarity=0.182 Sum_probs=129.2
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEEC--CEEcc------------CCCCEEEeecCCccceEEEEEEcc
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYN--GEPLQ------------ETDEVVFSDQSDMHSYVSIVTIKS 78 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~L~i~~ 78 (785)
|.+...| .+.+.+|++++|.|.+. +.+.+.|+++ +..+. ...++.+.... ...+|+|.+
T Consensus 2 ~~v~~~~-~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~ 74 (211)
T 3tv3_L 2 SALTQPP-SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSG----NTASLTVSG 74 (211)
T ss_dssp -CCBCCS-EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEET----TEEEEEEES
T ss_pred ceEEeCc-eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccC----CEEEEEECC
Confidence 4566667 89999999999999987 8889999994 22111 22344433321 235699999
Q ss_pred cCCCCCeEEEEEEEcCCe--eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccC--CCeEEEeECCEEc
Q psy2775 79 IKKREEGVYTVVAKNREG--EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEP--SPKVEWYKDGKLI 154 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~~--~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p--~~~v~W~~~g~~~ 154 (785)
++.+|+|.|+|.|.+..+ .......|.|......+|.+...+....+..|+.+.|.|.+.|.+ .+.+.|++||..+
T Consensus 75 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 154 (211)
T 3tv3_L 75 LQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPV 154 (211)
T ss_dssp CCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeec
Confidence 999999999999999877 344456677764444677777665555555899999999998853 4799999999988
Q ss_pred ccceE-----EEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEE
Q psy2775 155 KDRQI-----TSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAA 196 (785)
Q Consensus 155 ~~~~~-----~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 196 (785)
..... ...++ ...|.|.++..+|+|.|+|.|.|..+....++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 155 KAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp CTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 65311 11111 25799999999999999999999987665543
No 197
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.82 E-value=1.9e-19 Score=173.91 Aligned_cols=178 Identities=18% Similarity=0.220 Sum_probs=125.9
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEec-CCCeeEEEECC---EE--c---c----------CCCCEEEeecCCccceEEE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAV-PEPDLLWYYNG---EP--L---Q----------ETDEVVFSDQSDMHSYVSI 73 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~~i~W~~~~---~~--~---~----------~~~~~~~~~~~~~~~~~~~ 73 (785)
|.+...| .+.+.+|++++|.|.+.+. |.+.+.|+++. .. + . ...++.+... ....+
T Consensus 2 ~~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~----~~~~~ 76 (218)
T 3s96_B 2 LVLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSS----GADRY 76 (218)
T ss_dssp CSEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEE----TTEEE
T ss_pred CeEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecC----CceEE
Confidence 5677777 9999999999999999998 88999999832 10 0 0 0123333321 12356
Q ss_pred EEEcccCCCCCeEEEEEEEcCCe-----eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCC-eEE
Q psy2775 74 VTIKSIKKREEGVYTVVAKNREG-----EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVE 146 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~~-----~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~ 146 (785)
|+|.+++.+|+|.|+|.|.+..+ .......|.|......+|.+...........|+.+.|.|.+.| .|.+ .|+
T Consensus 77 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~ 156 (218)
T 3s96_B 77 LSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVA 156 (218)
T ss_dssp EEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEE
T ss_pred EEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEE
Confidence 99999999999999999998765 2233456777654445677766445555667899999999987 5666 899
Q ss_pred EeECCEEcccceE----EEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEE
Q psy2775 147 WYKDGKLIKDRQI----TSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESA 195 (785)
Q Consensus 147 W~~~g~~~~~~~~----~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 195 (785)
|++||..+..... ...++ ...|.|.....+|+|.|+|.|.|..+..+.+
T Consensus 157 W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 157 WKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp EEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred EEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 9999998865210 00111 2348888888899999999999998765543
No 198
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.82 E-value=7.5e-20 Score=183.05 Aligned_cols=182 Identities=13% Similarity=0.232 Sum_probs=125.5
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEE---ecCCCeeEEEECCEEccCC------------------CCEEEeecCCccc
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLV---AVPEPDLLWYYNGEPLQET------------------DEVVFSDQSDMHS 69 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~---g~p~~~i~W~~~~~~~~~~------------------~~~~~~~~~~~~~ 69 (785)
..+.+...+..+.+.+|++++|.|.+. +.+.+.|.|++++...... .+..+..+.. .
T Consensus 4 g~~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~ 81 (268)
T 3mj6_A 4 GLPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTF--H 81 (268)
T ss_dssp --------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTT--T
T ss_pred cccccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCC--C
Confidence 346677788889999999999999997 6677889999965432211 2333221111 1
Q ss_pred eEEEEEEcccCCCCCeEEEEEEEcCCee--EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE---eccCCCe
Q psy2775 70 YVSIVTIKSIKKREEGVYTVVAKNREGE--AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV---GGEPSPK 144 (785)
Q Consensus 70 ~~~~L~i~~~~~~D~G~Y~C~a~~~~~~--~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~---~g~p~~~ 144 (785)
...+|.|.+++.+|+|.|+|.|.+..+. ....+.|.|.. . .+....+.+|+.+.|.|.+ .+.|.+.
T Consensus 82 ~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~---~------~p~~~~v~~G~~v~L~C~~~~~~~~p~~~ 152 (268)
T 3mj6_A 82 NDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP---E------EPRDLRVRVGDTTQMRCSIQSTEEKRVTK 152 (268)
T ss_dssp TBCCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC---C------CCSEEEEETTCCEEECCBCEESSSSCCCE
T ss_pred CEEEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec---c------CCCccccccCCcEEEEEEecCCCCCCccc
Confidence 1245999999999999999999986543 34445555541 1 2246778899999999999 5668899
Q ss_pred EEEeE-CCEEcccce----------------------EEE----eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEE
Q psy2775 145 VEWYK-DGKLIKDRQ----------------------ITS----EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAAN 197 (785)
Q Consensus 145 v~W~~-~g~~~~~~~----------------------~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 197 (785)
+.|++ ++..+.... ... .....+|.|.+++.+|+|.|+|.|.|..|.....+.
T Consensus 153 v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 232 (268)
T 3mj6_A 153 VNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIV 232 (268)
T ss_dssp EEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEE
Confidence 99999 332221110 000 123568999999999999999999999999888899
Q ss_pred EEeecC
Q psy2775 198 LNVDPY 203 (785)
Q Consensus 198 l~V~~~ 203 (785)
|.|...
T Consensus 233 l~V~~~ 238 (268)
T 3mj6_A 233 LHVVQD 238 (268)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 988644
No 199
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.82 E-value=5.1e-20 Score=172.44 Aligned_cols=165 Identities=17% Similarity=0.217 Sum_probs=124.0
Q ss_pred CceEecCCCeEEEEEEEEecCCCeeEEEECCEE--ccC------------CCCEEEeecCCccceEEEEEEcccCCCCCe
Q psy2775 20 KPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEP--LQE------------TDEVVFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 20 ~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~--~~~------------~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
..+.+.+|++++|.|.+.+.|.+.+.|++++.. +.. ..+..+... .......+|.|.+++.+|+|
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~~L~i~~v~~~D~G 81 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRS-LWDQGNFPLIIKNLKIEDSD 81 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGG-GGGGTBCCEEECSCCGGGCE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccc-cccCCeEEEEEecCCHHHCE
Confidence 457899999999999998888899999999853 211 111211110 00111245999999999999
Q ss_pred EEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCE
Q psy2775 86 VYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNT 165 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~ 165 (785)
.|+|.+.+..+ .+.|.|.. +.. +....+.+|+.+.|.|.+.+.|.+.+.|+++|..+. ...
T Consensus 82 ~Y~C~~~~~~~----~~~l~V~~-------~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~-------~~~ 142 (184)
T 2ny1_B 82 TYICEVEDQKE----EVQLLVFG-------LTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI-------QGG 142 (184)
T ss_dssp EEEEEETTEEE----EEEEEEEE-------EEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE-------EES
T ss_pred EEEEEEEcCCC----cEEEEEEE-------ecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc-------cCc
Confidence 99999998754 33444431 112 234577899999999999889999999999986552 123
Q ss_pred EEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCC
Q psy2775 166 HTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYE 204 (785)
Q Consensus 166 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 204 (785)
.+|.|.+++.+|+|.|+|.|.|..+..+..+.|.|.+.+
T Consensus 143 ~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 143 KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 479999999999999999999999999999999998653
No 200
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.81 E-value=2.2e-19 Score=172.21 Aligned_cols=171 Identities=12% Similarity=0.176 Sum_probs=122.6
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EEc------------cCCCCEEEeecCCccceEEEEEEccc
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EPL------------QETDEVVFSDQSDMHSYVSIVTIKSI 79 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~L~i~~~ 79 (785)
.|.. |..+.+.+|++++|.|.+.+.|.+.|.|++++ ..+ ....++.+...+ ....|+|.++
T Consensus 3 ~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v 77 (210)
T 1lk3_L 3 VLTQ-PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSG----TDFTLTIDPV 77 (210)
T ss_dssp CEEC-CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEESSC
T ss_pred cEEC-CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecC----CEEEEEECCC
Confidence 3555 88999999999999999999888899999843 211 112344433221 1246999999
Q ss_pred CCCCCeEEEEEEEcCCeeEEE-EeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEeECCEEccc
Q psy2775 80 KKREEGVYTVVAKNREGEAKM-DIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYKDGKLIKD 156 (785)
Q Consensus 80 ~~~D~G~Y~C~a~~~~~~~~~-~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~~~g~~~~~ 156 (785)
+.+|+|.|+|.|.|..+.... ...|.|.. ...+|.+...........|+.+.|.|.+.|. |++ .|.|++||..+..
T Consensus 78 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~ 156 (210)
T 1lk3_L 78 EADDTAIYFCQQSWNGPLTFGAGTKLELKR-ADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRD 156 (210)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECC-CCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCT
T ss_pred CHHHCeEEEEEEEcCCCceeCCCEEEEEcC-CCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCC
Confidence 999999999999988764332 33566643 2235666654443345589999999999874 443 8999999998875
Q ss_pred c-eEE----E-eCC----EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 157 R-QIT----S-EKN----THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 157 ~-~~~----~-~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
. ... . .++ .++|.|.++..+|+|.|+|.|.|...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 157 GVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp TEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred CceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 5 111 1 111 24799999999999999999999875
No 201
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.81 E-value=1.2e-19 Score=174.55 Aligned_cols=174 Identities=14% Similarity=0.182 Sum_probs=124.5
Q ss_pred ccCCCeEEecCCcEEEEEEEeC-CCceEEEEECC--EEc------------ccCCCEEEEEeCcEEEEEEccCCCCCcEE
Q psy2775 420 VPLQDVKVSRDEKASFEIELTK-GDALVKWYKDG--KEI------------AFSENVTLSIDGKKQKLIIFSAGLEDAGE 484 (785)
Q Consensus 420 ~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 484 (785)
..+..+.+.+|++++|.|.+.+ +.+.+.|+|++ ..+ ....++.+..++....|.|.+++.+|+|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 85 (213)
T 3d9a_L 6 QSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGM 85 (213)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred eCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEE
Confidence 3456778999999999999988 56789999853 211 11256777767777899999999999999
Q ss_pred EEEEEeec-Ccc-eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEe
Q psy2775 485 YSCRVGDT-GDK-ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFI 562 (785)
Q Consensus 485 Y~C~a~n~-g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~ 562 (785)
|+|.|.|. +.. ...+.|.|..... +|.+.
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~~-------------------------------------------------~p~v~ 116 (213)
T 3d9a_L 86 YFCQQSNSWPYTFGGGTKLEIKRADA-------------------------------------------------APTVS 116 (213)
T ss_dssp EEEEECSSSSCEECCCEEEEECCCCB-------------------------------------------------CCEEE
T ss_pred EEEeeecCCcceeCCCEEEEEecCCC-------------------------------------------------CceeE
Confidence 99999996 432 2345677754310 13333
Q ss_pred eeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecCC-CC-eeEEee-CC----eEEEEEccCCCCCCceeEEEE
Q psy2775 563 ERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLSS-PK-KREIFD-GE----NIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 563 ~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~~-~~-~~~~~~-~~----~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
.......+.+|+.++|.|.+.| .|+| .|+|+|+|..+..+ .. ...... ++ .++|.|.++.. +|+|.|+|.
T Consensus 117 ~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~ 195 (213)
T 3d9a_L 117 IFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEY-ERHNSYTCE 195 (213)
T ss_dssp EECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHH-HHCCEEEEE
T ss_pred eECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEecccc-CCCCEEEEE
Confidence 3222333457999999999998 6666 89999999998655 11 111111 11 34899999998 999999999
Q ss_pred EEcCCcceEE
Q psy2775 634 ATNELGSATH 643 (785)
Q Consensus 634 a~n~~g~~~~ 643 (785)
|.|.......
T Consensus 196 a~n~~~~~~~ 205 (213)
T 3d9a_L 196 ATHKTSTSPI 205 (213)
T ss_dssp EECTTCSSCE
T ss_pred EEEccCCCce
Confidence 9999876533
No 202
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.81 E-value=4.1e-20 Score=172.90 Aligned_cols=152 Identities=16% Similarity=0.266 Sum_probs=111.9
Q ss_pred CCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcc-cCCCCCeEEEEEEEcCCee
Q psy2775 19 TKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKS-IKKREEGVYTVVAKNREGE 97 (785)
Q Consensus 19 ~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~D~G~Y~C~a~~~~~~ 97 (785)
+....+.+|++++|.|.+.+ +. .|.|+|++..+..... .+|.|.+ ++.+|+|.|+|.|.|..|.
T Consensus 6 ~~~~v~~~G~~v~L~C~~~~-~~-~i~W~k~g~~l~~~~~-------------~~L~I~~~~~~~D~G~Y~C~a~n~~g~ 70 (186)
T 1jbj_A 6 IEYKVSISGTSVELTCPLDS-DE-NLKWEKNGQELPQKHD-------------KHLVLQDFSEVEDSGYYVCYTPASNKN 70 (186)
T ss_dssp CCCEEEEETTEEEEECSSCC-CT-TCEEEETTEEECSCCC-------------SEEEEESCCTTTSCEEEEEECSSCCCC
T ss_pred eEEEEEeCCcEEEEEEeCCC-CC-ceEEEECCEECCCCCC-------------CEEEECCCCccccCEEEEEEEEeCCCc
Confidence 33445578999999999977 44 4999999998866411 1499999 9999999999999999887
Q ss_pred EEEEeeEEEeCCCCCC--------------CceecCC----Cc---eEeccCCcEEEEEEEeccCCCeEEEeECCEEccc
Q psy2775 98 AKMDIPVKVNTGKPEK--------------PSILEPL----HD---VSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKD 156 (785)
Q Consensus 98 ~~~~~~v~v~~~~~~~--------------p~i~~~~----~~---~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~ 156 (785)
....+.+.|....+.. |.+.... .. ..+.+|+.+.|.|.+ |.+.|+|+|||..+..
T Consensus 71 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~ 147 (186)
T 1jbj_A 71 TYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISP 147 (186)
T ss_dssp CCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCC
T ss_pred EEEEEEEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcc
Confidence 5555555443211111 1111000 01 234489999999988 7889999999999864
Q ss_pred ceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeE
Q psy2775 157 RQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV 192 (785)
Q Consensus 157 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 192 (785)
.. ....+|.|.++..+|+|.|+|.|.|..|..
T Consensus 148 ~~----~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 148 LN----ATKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SS----CCSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred cC----CCcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 32 234579999999999999999999998765
No 203
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.81 E-value=4.6e-20 Score=172.46 Aligned_cols=162 Identities=15% Similarity=0.105 Sum_probs=122.6
Q ss_pred CCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCC
Q psy2775 110 KPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKE 189 (785)
Q Consensus 110 ~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 189 (785)
...+|.|...+.. .+.+|+.++|.|.+.+ +.+.+.|+|+|... ......|.|.+++.+|+|.|+|.|.|..
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~-------~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 75 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR-------YQDQAVLFIPAMKRSLAGRYRCSYQNGS 75 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC-------EESSSEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc-------cCcccEEEECcCChhhCceEEEEEEcCC
Confidence 3467777766654 7899999999999987 77899999998761 1234479999999999999999999987
Q ss_pred eeE--EEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeE
Q psy2775 190 GTV--ESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKV 267 (785)
Q Consensus 190 g~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v 267 (785)
|.. +..+.|.|.... .+|.+...+ ...+.+|+.++|.|.+.+.| +.+
T Consensus 76 g~~~~s~~~~l~V~~~~-----------------------------~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~ 124 (184)
T 2gi7_A 76 LWSLPSDQLELVATGVF-----------------------------AKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQF 124 (184)
T ss_dssp EEBCCCCCEEEEEESSS-----------------------------CCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEE
T ss_pred CccCCCCCEEEEecCcC-----------------------------CCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEE
Confidence 632 234666665322 345565554 45678999999999987654 699
Q ss_pred EEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy2775 268 EWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEG 312 (785)
Q Consensus 268 ~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g 312 (785)
.|+++|..+.... ........|.|.+++.+|+|.|+|.|.|..+
T Consensus 125 ~w~k~g~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 125 ALYKEGDPAPYKN-PERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EEEECCCCTTSCC-CCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred EEEECCCcCccee-cCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 9999998775311 1122345799999999999999999999754
No 204
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.81 E-value=4.5e-20 Score=172.86 Aligned_cols=157 Identities=13% Similarity=0.194 Sum_probs=118.8
Q ss_pred CeEEecCCcEEEEEEEeC-CCceEEEEECCEE--ccc------------CCCEEEEE---eCcEEEEEEccCCCCCcEEE
Q psy2775 424 DVKVSRDEKASFEIELTK-GDALVKWYKDGKE--IAF------------SENVTLSI---DGKKQKLIIFSAGLEDAGEY 485 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~--~~~------------~~~~~~~~---~~~~~~L~i~~~~~~d~G~Y 485 (785)
.+.+.+|++++|.|.+.+ +.+.+.|++++.. +.. ..+..... ......|.|.+++.+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 456789999999999986 5678999999863 211 11222211 11245699999999999999
Q ss_pred EEEEeecCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeee
Q psy2775 486 SCRVGDTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERF 565 (785)
Q Consensus 486 ~C~a~n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~ 565 (785)
+|.|.|. ...+.|.|.... .+
T Consensus 84 ~C~~~~~---~~~~~l~V~~~~--------------------------------------------------------~~ 104 (184)
T 2ny1_B 84 ICEVEDQ---KEEVQLLVFGLT--------------------------------------------------------AN 104 (184)
T ss_dssp EEEETTE---EEEEEEEEEEEE--------------------------------------------------------ES
T ss_pred EEEEEcC---CCcEEEEEEEec--------------------------------------------------------CC
Confidence 9999984 335666665321 01
Q ss_pred eeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEE
Q psy2775 566 EEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGA 645 (785)
Q Consensus 566 ~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~ 645 (785)
....+.+|++++|.|.+.|.|.|.+.|++++..+. ....+|.|.++.. +|+|.|+|.|.|..|....++
T Consensus 105 ~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~----------~~~~~L~i~~v~~-~d~G~Y~C~a~n~~~~~~~~~ 173 (184)
T 2ny1_B 105 SDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI----------QGGKTLSVSQLEL-QDSGTWTCTVLQNQKKVEFKI 173 (184)
T ss_dssp SCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEE----------EESSEEEESSCCG-GGCEEEEEEEEETTEEEEEEE
T ss_pred CCceeecCCCEEEEEEcCCCCCCEEEEEeCCCccc----------cCceEEEEecCCc-CCCeEEEEEEEECCceEEEEE
Confidence 13467899999999999999999999999876541 2335699999999 999999999999999888888
Q ss_pred EEEEE
Q psy2775 646 RVTVD 650 (785)
Q Consensus 646 ~l~V~ 650 (785)
.|.|.
T Consensus 174 ~l~V~ 178 (184)
T 2ny1_B 174 DIVVL 178 (184)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87776
No 205
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.81 E-value=6.2e-20 Score=176.55 Aligned_cols=173 Identities=16% Similarity=0.224 Sum_probs=125.2
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCC--E---Eec---------CCCCeeEEeeCCeEEEEEccCCCC
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--K---PLL---------SSPKKREIFDGENIILELKEADSE 624 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~---~i~---------~~~~~~~~~~~~~~~L~i~~~~~~ 624 (785)
|.+...+....+.+|++++|.|.+.|.|.+.|.|+|++ . .+. ...++.....+...+|.|.+++.
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~- 80 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC- 80 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG-
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh-
Confidence 45666677889999999999999999999999999943 1 111 13456566667788999999999
Q ss_pred CCceeEEEEEEcCCcc---eEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCC
Q psy2775 625 TDAGDYKVVATNELGS---ATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPP 701 (785)
Q Consensus 625 ~d~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~ 701 (785)
+|+|.|+|.|.|..|. ....+.|.|.. ...+|.+... .
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~--------------------------------------~~~~p~v~~~-~ 121 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVKG--------------------------------------DPVAPTVLIF-P 121 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEEC--------------------------------------CCBCCEEEEE-C
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEeC--------------------------------------CCcCCeEEEe-C
Confidence 9999999999998873 33445666652 1134444321 1
Q ss_pred CcEEeecCCeEEEEEEEec-CCCCceEEeECCEEeeecc-c-cc------cchhhhcccccceeeeeeceEEEEEEeccc
Q psy2775 702 PEVLVKKGEDLKIEVRFKA-LPPPKAEWTVNGTVIVPSK-R-VK------GKAEFIKKLDDLEVKERENAVLEVEVTSDK 772 (785)
Q Consensus 702 ~~~~~~~g~~~~l~C~~~g-~P~p~i~W~~~~~~~~~~~-~-~~------~~~~~~~~l~~~~v~~~~~~~~~c~~~~~~ 772 (785)
....+..|+.++|.|.+.| .|+|.|.|+++|..+..+. . .. ........|.+..+...|.|.|+|.+. .+
T Consensus 122 ~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~-~g 200 (213)
T 3nl4_L 122 PSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT-QG 200 (213)
T ss_dssp CCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE-ET
T ss_pred CchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE-eC
Confidence 1223556999999999999 9999999999999987543 0 00 111122457777888889999999998 44
No 206
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.81 E-value=2e-20 Score=175.06 Aligned_cols=165 Identities=15% Similarity=0.239 Sum_probs=110.5
Q ss_pred EEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEcc-CCCCCcEEEEEEEeec-CcceeEEEEEE
Q psy2775 426 KVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFS-AGLEDAGEYSCRVGDT-GDKESKATLTV 503 (785)
Q Consensus 426 ~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~d~G~Y~C~a~n~-g~~~~~~~l~V 503 (785)
....|+++.|.|.+.+ .+.|.|+|+|..+..... ..|.|.+ ++.+|+|.|+|.|.|. |.......+.|
T Consensus 10 v~~~G~~v~L~C~~~~-~~~i~W~k~g~~l~~~~~---------~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v 79 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DENLKWEKNGQELPQKHD---------KHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARV 79 (186)
T ss_dssp EEEETTEEEEECSSCC-CTTCEEEETTEEECSCCC---------SEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCC
T ss_pred EEeCCcEEEEEEeCCC-CCceEEEECCEECCCCCC---------CEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEE
Confidence 3468999999999987 445999999999865421 2699999 9999999999999997 66444444444
Q ss_pred EcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEee---eeeeeeeeecCeEEEEE
Q psy2775 504 EAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIE---RFEEKTVKEKGTIRLMA 580 (785)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~---~~~~~~v~~g~~v~l~C 580 (785)
........ .+... ... .... .+...|.... ......+.+|++++|.|
T Consensus 80 ~~~~~~~~--~~~~~-----~~~----~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C 129 (186)
T 1jbj_A 80 GSADDAKK--DAAKK-----DDA----KKDD-------------------AKKDGSQTNKAKNLVQVDGSRGDGSVLLTC 129 (186)
T ss_dssp CSCCCCCC--CCCCC-----CCC----SCCS-------------------SSTTCCSCCCCSSCCEECCCSSSCEEEEEC
T ss_pred eccccccc--ccccc-----ccc----ccCC-------------------ccccccccccccccccceecCCCCeEEEEe
Confidence 33211000 00000 000 0000 0000000000 00112456999999999
Q ss_pred EEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcce
Q psy2775 581 KVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSA 641 (785)
Q Consensus 581 ~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~ 641 (785)
.+ |.|.|+|+|||..+..... ...+|.|.++.. +|+|.|+|.|.|..|..
T Consensus 130 ~~---p~p~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~-~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 130 GL---TDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAK-DPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SS---SCSCEEEEETTEECCCSSC-------CSSCCEEEETTS-CCEEEEEEEESSCEEEE
T ss_pred eC---CCCeEEEEECCEECcccCC-------CcceEEECCCCc-CcCEEEEEEEEcCcCCc
Confidence 98 8899999999999864322 345699999999 99999999999999876
No 207
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.81 E-value=8.5e-20 Score=176.25 Aligned_cols=180 Identities=17% Similarity=0.142 Sum_probs=125.2
Q ss_pred cCCCeEEecCCcEEEEEEEeC-CCc---eEEEEECCEEcccC------------------CCEEEEE---eCcEEEEEEc
Q psy2775 421 PLQDVKVSRDEKASFEIELTK-GDA---LVKWYKDGKEIAFS------------------ENVTLSI---DGKKQKLIIF 475 (785)
Q Consensus 421 ~~~~~~v~~g~~~~l~C~~~~-~~~---~i~W~~~~~~~~~~------------------~~~~~~~---~~~~~~L~i~ 475 (785)
.+..+.+.+|++++|.|.+.+ +.+ .|.|+|++..+... .++.+.. .....+|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 345678899999999999987 333 48999987543211 1111110 1123469999
Q ss_pred cCCCCCcEEEEEEEeec-Ccce-eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 476 SAGLEDAGEYSCRVGDT-GDKE-SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~-g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
+++.+|+|.|.|.+.|. +... ....+.+..++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------- 118 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVPP---------------------------------------------- 118 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCC----------------------------------------------
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeeec----------------------------------------------
Confidence 99999999999999986 3332 33334443332
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEE-eeCCeEEEEEccCCCCCCceeEEE
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREI-FDGENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~-~~~~~~~L~i~~~~~~~d~G~Y~C 632 (785)
+..........+..|+.+.|.|.+.|.|+|.|+|+|++..+......... .....+.|.|.++.. +|+|.|+|
T Consensus 119 -----~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~YtC 192 (218)
T 4frw_A 119 -----LPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRS-MNGQPLTC 192 (218)
T ss_dssp -----CCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGG-GTTCEEEE
T ss_pred -----cceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCH-HhCeEEEE
Confidence 11222223456778999999999999999999999999877543221100 011245799999999 99999999
Q ss_pred EEEcCCcceEEEEEEEEEee
Q psy2775 633 VATNELGSATHGARVTVDVE 652 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V~~~ 652 (785)
.|+|..|.....+++.|.|.
T Consensus 193 ~a~N~~g~~~~~~t~~v~V~ 212 (218)
T 4frw_A 193 VVSHPGLLQDQRITHILHVS 212 (218)
T ss_dssp EEECTTCSSCEEEEEECCEE
T ss_pred EEEeCCCCeEEEEEEEEEEC
Confidence 99999999888888888753
No 208
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=2.8e-19 Score=174.21 Aligned_cols=183 Identities=13% Similarity=0.084 Sum_probs=132.0
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..+|.|...|.. .|.+|++|+|.|.+.+ +...+.|+|++..+..... ..........|.|.+++.+|+|.|+|
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-----~~~~~~~~~~L~I~~v~~~DsG~Y~C 77 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-----KPPERINKVKFYIPDMNSRMAGQYSC 77 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-----SSCTTCCEEEEEECSCCGGGCEEEEE
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-----cccCCcceeEEEecCCCcccCeEEEE
Confidence 357889888887 8999999999999864 4568999999987541100 00011123569999999999999999
Q ss_pred EEEcCCeeE--EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEE
Q psy2775 90 VAKNREGEA--KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHT 167 (785)
Q Consensus 90 ~a~~~~~~~--~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 167 (785)
.+.+..+.. +..+.|.|.. ...+|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+|+|..+.. ..........
T Consensus 78 ~~~~~~~~s~~S~~~~L~V~~-~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~-~~~~~~~~~~ 153 (242)
T 1p6f_A 78 IYRVGELWSEPSNLLDLVVTE-MYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV-QRGYGKVQAE 153 (242)
T ss_dssp EEEETTEECCCCCCEEEEEEC-CSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCEE-EEEECSSEEE
T ss_pred EEecCCccccCCcceEEEeec-ccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccCc-cccCCCceEE
Confidence 998765432 3345566653 22356666554 4568899999999998754 469999999987654 2234456778
Q ss_pred EEEcccCCCCcEEEEEEEEcCC---eeEEEEEEEEeecC
Q psy2775 168 LTLIQCSTKDKGRYSVKVTNKE---GTVESAANLNVDPY 203 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~n~~---g~~~~~~~l~V~~~ 203 (785)
|.|.+++.+|+|.|+|.|.|.. ...+..+.|.|...
T Consensus 154 l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~ 192 (242)
T 1p6f_A 154 FPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGD 192 (242)
T ss_dssp EEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC-
T ss_pred EEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEecc
Confidence 9999999999999999999864 12334577777654
No 209
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.81 E-value=5.5e-19 Score=171.15 Aligned_cols=181 Identities=16% Similarity=0.216 Sum_probs=125.0
Q ss_pred eecCCceEecCCCeEEEEEEEEecCC-----CeeEEEECCEEccC---------------CCCEEEeecCCccceEEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVPE-----PDLLWYYNGEPLQE---------------TDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p~-----~~i~W~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~L~ 75 (785)
..++..+.+.+|++++|.|.+.+.|. +.+.|++++..+.. ..+..+..+. ......+|+
T Consensus 5 ~~p~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~-~~~~~~~L~ 83 (222)
T 3sbw_C 5 TVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQ-LSLGNAALQ 83 (222)
T ss_dssp BCSCSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHH-HTTTEEEEE
T ss_pred ecCCccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEcccc-ccCCEEEEE
Confidence 34567789999999999999977663 48999997643210 1233322110 011235799
Q ss_pred EcccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeEC-CEEc
Q psy2775 76 IKSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKD-GKLI 154 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~-g~~~ 154 (785)
|.+++.+|+|.|+|.|.+ .+.....+.|.|.. ++..|.+. ....+..|+.+.|.|.+.|.|.+.+.|+++ |..+
T Consensus 84 I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~-~~~~~~~~---~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~ 158 (222)
T 3sbw_C 84 ITDVKLQDAGVYRCMISY-GGADYKRITVKVNA-PYNKINQR---ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVL 158 (222)
T ss_dssp ESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEB-CCCCCEEE---EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEE
T ss_pred EcCcccccCeEEEEEEEe-CCCceeEEEEEEEC-CCCCCCce---eeeeecCCCcEEEEEEecCCCCCeEEEEECCCcee
Confidence 999999999999999999 56666677788863 11122211 112567899999999999999999999998 6665
Q ss_pred ccceEE--EeCCE---EEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeec
Q psy2775 155 KDRQIT--SEKNT---HTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDP 202 (785)
Q Consensus 155 ~~~~~~--~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 202 (785)
...... ..... ....+..+..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 211 (222)
T 3sbw_C 159 SGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPE 211 (222)
T ss_dssp CCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred cCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecC
Confidence 543211 11111 1122224567899999999999999999999998864
No 210
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=8.9e-19 Score=172.71 Aligned_cols=185 Identities=14% Similarity=0.211 Sum_probs=129.0
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEc-----------------cCCCCEEEeecCCccceEE
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPL-----------------QETDEVVFSDQSDMHSYVS 72 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~-----------------~~~~~~~~~~~~~~~~~~~ 72 (785)
.+.. |..+.+.+|++++|.|.+.|.| .+.|.|++++ ..+ ....++.+..+... ...
T Consensus 5 ~v~~-p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~ 81 (247)
T 2ghw_B 5 QLVQ-SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSK--NTL 81 (247)
T ss_dssp EEEE-ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTT--TEE
T ss_pred EEEe-cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCC--CEE
Confidence 3444 4569999999999999999887 5789999843 110 11235554433211 235
Q ss_pred EEEEcccCCCCCeEEEEEEEcCCeeE--EEEeeEEEeCCC-----------CCCCceecCCCceEeccCCcEEEEEEEec
Q psy2775 73 IVTIKSIKKREEGVYTVVAKNREGEA--KMDIPVKVNTGK-----------PEKPSILEPLHDVSITEGESAVLSVQVGG 139 (785)
Q Consensus 73 ~L~i~~~~~~D~G~Y~C~a~~~~~~~--~~~~~v~v~~~~-----------~~~p~i~~~~~~~~~~~G~~v~l~C~~~g 139 (785)
+|+|.+++.+|+|.|+|.|.|..+.. .....|.|.... ..+|.+...+....+.+|+.+.|.|.+.+
T Consensus 82 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 161 (247)
T 2ghw_B 82 YLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQ 161 (247)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESS
T ss_pred EEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCC
Confidence 69999999999999999999874332 223466665321 13455666667788999999999999999
Q ss_pred cCCCeEEEeE--CCEEcc-------------cce--EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEE-EEEEEEee
Q psy2775 140 EPSPKVEWYK--DGKLIK-------------DRQ--ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE-SAANLNVD 201 (785)
Q Consensus 140 ~p~~~v~W~~--~g~~~~-------------~~~--~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 201 (785)
.|.+.+.|+| +|..+. ... ........+|+|.+++.+|+|.|+|.|.|...... ....|.|.
T Consensus 162 ~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 162 SVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 8888999999 555431 011 11234567899999999999999999998643322 34566664
No 211
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.81 E-value=1.5e-19 Score=173.60 Aligned_cols=177 Identities=16% Similarity=0.183 Sum_probs=127.6
Q ss_pred ccccCCCeEEecCCcEEEEEEEeCCCceEEEEEC--CEEcc------------cCCCEEEEEeCcEEEEEEccCCCCCcE
Q psy2775 418 ISVPLQDVKVSRDEKASFEIELTKGDALVKWYKD--GKEIA------------FSENVTLSIDGKKQKLIIFSAGLEDAG 483 (785)
Q Consensus 418 ~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~--~~~~~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G 483 (785)
+..++ ...+.+|++++|.|.+. +.+.+.|+|+ +..+. ...++.+........|+|.+++.+|+|
T Consensus 4 v~~~~-~~~v~~G~~v~L~C~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 81 (211)
T 3tv3_L 4 LTQPP-SASGSPGQSITISCTGT-SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEA 81 (211)
T ss_dssp CBCCS-EEEECTTCEEEEEEECC-CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCE
T ss_pred EEeCc-eEEEcCCCCEEEEEEEC-CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCE
Confidence 34445 77889999999999999 8889999994 22211 235666666677789999999999999
Q ss_pred EEEEEEeec-C--cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCe
Q psy2775 484 EYSCRVGDT-G--DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPL 560 (785)
Q Consensus 484 ~Y~C~a~n~-g--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~ 560 (785)
.|+|.|.|. + .....+.|.|...+. .+|.
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------------~~P~ 113 (211)
T 3tv3_L 82 VYYCGSLVGNWDVIFGGGTKLTVLGQPK------------------------------------------------AAPS 113 (211)
T ss_dssp EEEEEEEETTTEEEECCCEEEEECCSCC------------------------------------------------BCCE
T ss_pred EEEEEEecCCCceeECCCceEEEeCCCC------------------------------------------------cCCe
Confidence 999999997 4 244456777763210 1244
Q ss_pred EeeeeeeeeeeecCeEEEEEEEecCC--CCceEEEeCCEEecCCCCee--EEeeCC----eEEEEEccCCCCCCceeEEE
Q psy2775 561 FIERFEEKTVKEKGTIRLMAKVKASP--APSIVWFRNNKPLLSSPKKR--EIFDGE----NIILELKEADSETDAGDYKV 632 (785)
Q Consensus 561 ~~~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~~~~i~~~~~~~--~~~~~~----~~~L~i~~~~~~~d~G~Y~C 632 (785)
+...+....+.+|+.++|.|.+.|.+ .+.+.|+|+|..+..+.... ....++ ...|.|.++.. +|+|.|+|
T Consensus 114 v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~Y~C 192 (211)
T 3tv3_L 114 VTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQW-KSHRSYSC 192 (211)
T ss_dssp EEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHH-HHSSCEEE
T ss_pred eEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHh-CCCCeEEE
Confidence 44444444555899999999999963 46899999999986532111 111112 25699999888 89999999
Q ss_pred EEEcCCcceEEEE
Q psy2775 633 VATNELGSATHGA 645 (785)
Q Consensus 633 ~a~n~~g~~~~~~ 645 (785)
.|.|..|...+++
T Consensus 193 ~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 193 QVTHEGSTVEKTV 205 (211)
T ss_dssp EEEETTEEEEEEE
T ss_pred EEEECCCCEEeec
Confidence 9999998766544
No 212
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.81 E-value=3.8e-19 Score=169.00 Aligned_cols=169 Identities=12% Similarity=0.081 Sum_probs=121.0
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.+|.|...|. ..+.+|++++|.|.+.+ +.+.+.|+|++..+.......... . ......|+|.+++.+|+|.|+|.
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~-~--~~~~~~l~I~~v~~~D~G~Y~C~ 81 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHH-D--GVSKANFSISRMTQDLAGTYRCY 81 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEE-T--TEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecC-C--CCceEEEEeccCCcccCeEEEEe
Confidence 5788888886 78999999999999864 778999999987553211100000 0 11235699999999999999999
Q ss_pred EEcCCe-----eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccce--EEEeC
Q psy2775 91 AKNREG-----EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQ--ITSEK 163 (785)
Q Consensus 91 a~~~~~-----~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~--~~~~~ 163 (785)
+.+... ..+..+.|.|.. ...+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|+|..+.... .....
T Consensus 82 a~~~~~~~~~~~~s~~~~l~V~~-~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~ 158 (201)
T 1nkr_A 82 GSVTHSPYQVSAPSDPLDIVIIG-LYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVN 158 (201)
T ss_dssp EEBTTBTTCCCCCCCCEEEEEEC-SSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEET
T ss_pred EecCCCCccccCCCCCEEEEeec-cCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccC
Confidence 986431 223445666653 234567765544 46889999999999875 567999999998775432 11111
Q ss_pred --CEEEEEEcccCCCCcEEEEEEEEcCC
Q psy2775 164 --NTHTLTLIQCSTKDKGRYSVKVTNKE 189 (785)
Q Consensus 164 --~~~~L~i~~~~~~d~G~Y~C~a~n~~ 189 (785)
....|.|.+++ |+|.|+|.|.+..
T Consensus 159 ~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 159 GTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp TEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred CceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 25689999998 9999999998764
No 213
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.81 E-value=1.1e-18 Score=172.57 Aligned_cols=182 Identities=13% Similarity=0.180 Sum_probs=128.9
Q ss_pred eecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEc---c--------------CCCCEEEeecCCccceEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPL---Q--------------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~---~--------------~~~~~~~~~~~~~~~~~~~L 74 (785)
...|..+.+.+|++++|.|.+.+.| .+.|.|++++ ..+ . ...++.+..+... ...+|
T Consensus 4 l~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~~L 81 (256)
T 1nqb_A 4 LQQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPS--STAYM 81 (256)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTT--TEEEE
T ss_pred EECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCC--CEEEE
Confidence 3456779999999999999998875 5789999942 211 0 1234544432211 13569
Q ss_pred EEcccCCCCCeEEEEEEEcCCee-----EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCC-----e
Q psy2775 75 TIKSIKKREEGVYTVVAKNREGE-----AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSP-----K 144 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~~~-----~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~-----~ 144 (785)
+|.+++.+|+|.|+|.|.+..+. ....+.|.|. .+|.+...+....+.+|+.++|.|.+.+.|.+ .
T Consensus 82 ~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~----~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~ 157 (256)
T 1nqb_A 82 QLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS----SDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTY 157 (256)
T ss_dssp EECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC----CCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBC
T ss_pred EECcCChhhCEEEEEEEeeccCccceeEEcCceeeeec----ccccEEecCcEEEEecCCcEEEEeEecCcccccccceE
Confidence 99999999999999999998552 2233566665 45667666777889999999999999887764 9
Q ss_pred EEEeE--CCEEcc-------------cc--eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeE-EEEEEEEeecC
Q psy2775 145 VEWYK--DGKLIK-------------DR--QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV-ESAANLNVDPY 203 (785)
Q Consensus 145 v~W~~--~g~~~~-------------~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~V~~~ 203 (785)
+.|+| +|..+. .. .........+|.|.+++.+|+|.|+|.|.+..... .....|.|...
T Consensus 158 v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 158 LEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp EEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred EEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 99999 665431 01 11223456789999999999999999998854322 23466777643
No 214
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.80 E-value=6e-19 Score=168.96 Aligned_cols=171 Identities=17% Similarity=0.278 Sum_probs=127.7
Q ss_pred ceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceE-------------------EEeCCEEEEEEcccCCCCcEEEE
Q psy2775 122 DVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQI-------------------TSEKNTHTLTLIQCSTKDKGRYS 182 (785)
Q Consensus 122 ~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~-------------------~~~~~~~~L~i~~~~~~d~G~Y~ 182 (785)
...+.+|+.+.|.|...+.+.+.+.|++++.......+ .......+|.|.+++.+|+|.|+
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~ 87 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYT 87 (208)
T ss_dssp SSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEE
T ss_pred cceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEE
Confidence 45688999999999987788889999997643322111 00111236999999999999999
Q ss_pred EEEEcCC-eeEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEcc
Q psy2775 183 VKVTNKE-GTVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG 261 (785)
Q Consensus 183 C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g 261 (785)
|.+.+.. +.....+.|.|...+ ..|.+...... +.+|+.+.|.|.+.+
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~-----------------------------~~p~i~~~~~~--~~~g~~v~l~C~~~~ 136 (208)
T 3r4d_A 88 LDMTDENYRRTQATVRFHVHQPV-----------------------------TQPFLQVTNTT--VKELDSVTLTCLSND 136 (208)
T ss_dssp EEEECSSCEEEEEEEEEEEECCC-----------------------------CCCEEEESCSS--CCTTCCEEEEEECSC
T ss_pred EEEEcccCceeEEEEEEEeccCC-----------------------------CCCEEecCCce--EeeCCCEEEEEECCC
Confidence 9999985 566666778886432 33555554433 889999999999988
Q ss_pred CCCCeEEEEECCEEcc-cceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCceEEE-EEEEEec
Q psy2775 262 EPSPKVEWYKDGKLIK-DRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA-ANLNVDQ 324 (785)
Q Consensus 262 ~p~~~v~W~~~~~~l~-~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~~~-~~l~v~~ 324 (785)
.| +.+.|++++..+. ...........+|.|.++..+|.|.|+|.|.|..|...+. +.|.|..
T Consensus 137 ~p-p~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~ 200 (208)
T 3r4d_A 137 IG-ANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIF 200 (208)
T ss_dssp TT-CEEEEEETTEECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-
T ss_pred CC-CceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEe
Confidence 66 7999999999887 2233334444689999999999999999999999886643 5666654
No 215
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.80 E-value=1.7e-19 Score=176.04 Aligned_cols=179 Identities=18% Similarity=0.293 Sum_probs=130.1
Q ss_pred eecCCceEecCCCeEEEEEEEEecCC-CeeEEEECCEEcc---------CCCCE--EEe----------ecCCccceEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVPE-PDLLWYYNGEPLQ---------ETDEV--VFS----------DQSDMHSYVSI 73 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p~-~~i~W~~~~~~~~---------~~~~~--~~~----------~~~~~~~~~~~ 73 (785)
...|..+.+.+|+++.|.|.+.+.+. +.+.|++++.... ....+ .+. ...+ ..
T Consensus 4 v~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-----~~ 78 (231)
T 2pet_A 4 LSVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ-----GR 78 (231)
T ss_dssp CCCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT-----CC
T ss_pred ccCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC-----ce
Confidence 45678899999999999999998885 8999998654311 00001 111 1111 22
Q ss_pred EEEcccCCCCCeEEEEEEEcCC-eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcE-EEEEEE-eccCCCeEEEeEC
Q psy2775 74 VTIKSIKKREEGVYTVVAKNRE-GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESA-VLSVQV-GGEPSPKVEWYKD 150 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~-~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v-~l~C~~-~g~p~~~v~W~~~ 150 (785)
|+|.+++.+|+|.|+|.|.+.. +.....+.|.|.. .+..|.+...+....+.+|+.+ .|.|.+ .+.|.+.+.|+++
T Consensus 79 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~ 157 (231)
T 2pet_A 79 LVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFA-KPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRN 157 (231)
T ss_dssp EEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEB-CCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEET
T ss_pred EEEcccCcccCceEEEEEEecCCCceEEEEEEEEEe-cCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEEC
Confidence 9999999999999999999987 7777788888874 3344677777677778899988 999999 8899999999999
Q ss_pred CEEcccce-----EE--E----eCC-----EEEEEEcccCCCCcEEEEEEEEc-----CCee-EEEEEEEEe
Q psy2775 151 GKLIKDRQ-----IT--S----EKN-----THTLTLIQCSTKDKGRYSVKVTN-----KEGT-VESAANLNV 200 (785)
Q Consensus 151 g~~~~~~~-----~~--~----~~~-----~~~L~i~~~~~~d~G~Y~C~a~n-----~~g~-~~~~~~l~V 200 (785)
|..+.... .. . ... .+.|.|.....+|.|.|+|.|.| ..|. .+..+.|+|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 158 GQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp TEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred CccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 99876543 10 0 111 25688886667779999999999 4454 334455544
No 216
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.80 E-value=3.9e-19 Score=170.43 Aligned_cols=171 Identities=16% Similarity=0.186 Sum_probs=121.1
Q ss_pred CCCeEEecCCcEEEEEEEeC-CCceEEEEEC--CEEc------------ccCCCEEEEEeCcEEEEEEccCCCCCcEEEE
Q psy2775 422 LQDVKVSRDEKASFEIELTK-GDALVKWYKD--GKEI------------AFSENVTLSIDGKKQKLIIFSAGLEDAGEYS 486 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~--~~~~------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 486 (785)
+....+.+|++++|.|.+.+ +.+.+.|+++ +..+ ....++.+...+....|.|.+++.+|+|.|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 56778899999999999988 5678999984 2221 1135666666667789999999999999999
Q ss_pred EEEeec-Ccc-eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeee
Q psy2775 487 CRVGDT-GDK-ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIER 564 (785)
Q Consensus 487 C~a~n~-g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~ 564 (785)
|.|.|. +.. .....|.|..... +|.+...
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~~-------------------------------------------------~P~v~~~ 117 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRADA-------------------------------------------------APTVSIF 117 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCCB-------------------------------------------------CCEEEEE
T ss_pred EEEEcCCCceeCCCEEEEEcCCCc-------------------------------------------------CCeEEEE
Confidence 999996 422 2245677754310 1333332
Q ss_pred eeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCC-CC-eeEEe-eCC----eEEEEEccCCCCCCceeEEEEEE
Q psy2775 565 FEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSS-PK-KREIF-DGE----NIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 565 ~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~-~~-~~~~~-~~~----~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
.....+.+|+.++|.|.+.|. |++ .|.|+|+|..+..+ .. ..... .++ .++|.|.++.. +|+|.|+|.|.
T Consensus 118 ~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~ 196 (210)
T 1lk3_L 118 PPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADY-ESHNLYTCEVV 196 (210)
T ss_dssp CCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHH-HTCCEEEEEEE
T ss_pred CCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHh-ccCCcEEEEEE
Confidence 223334579999999999984 554 89999999988654 11 11111 112 23799999998 99999999999
Q ss_pred cCCcceE
Q psy2775 636 NELGSAT 642 (785)
Q Consensus 636 n~~g~~~ 642 (785)
|......
T Consensus 197 n~~~~~~ 203 (210)
T 1lk3_L 197 HKTSSSP 203 (210)
T ss_dssp CTTCSSC
T ss_pred ecCCCCe
Confidence 9877543
No 217
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=6.7e-19 Score=171.52 Aligned_cols=166 Identities=13% Similarity=0.117 Sum_probs=120.4
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-C
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-G 493 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g 493 (785)
+|.+...+.. .+.+|++++|.|.+.++.+.+.|+|++..+...... .........|.|.+++.+|+|.|+|.+.|. +
T Consensus 7 kP~i~~~P~~-~v~~G~~VtL~C~~~~~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 84 (242)
T 1p6f_A 7 KPFIWAEPHF-MVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 84 (242)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTTCCEEEEEETTEEEEEECCS-SCTTCCEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CCEEEeeCCC-ccCCCCcEEEEEeeCCCCcEEEEEECCCcccccccc-ccCCcceeEEEecCCCcccCeEEEEEEecCCc
Confidence 4555555555 788999999999998777789999999876421000 001123467999999999999999999885 3
Q ss_pred --cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeee
Q psy2775 494 --DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVK 571 (785)
Q Consensus 494 --~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~ 571 (785)
..+....|.|.+... +|.+...+ ...+.
T Consensus 85 ~s~~S~~~~L~V~~~~~-------------------------------------------------~P~i~~~p-~~~v~ 114 (242)
T 1p6f_A 85 WSEPSNLLDLVVTEMYD-------------------------------------------------TPTLSVHP-GPEVI 114 (242)
T ss_dssp ECCCCCCEEEEEECCSC-------------------------------------------------CCEEEEES-CSEEE
T ss_pred cccCCcceEEEeecccC-------------------------------------------------CCceEccC-CCccC
Confidence 234457777765310 13333322 34688
Q ss_pred ecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCC
Q psy2775 572 EKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 572 ~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~ 638 (785)
+|+.++|.|.+.+. .+.+.|+|+|..+.. ..........|.|.+++. +|+|.|+|.|.|..
T Consensus 115 ~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~-~d~G~Y~C~a~n~~ 175 (242)
T 1p6f_A 115 SGEKVTFYCRLDTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTT-AHRGTYRCFGSYNN 175 (242)
T ss_dssp TTCEEEEEEECTTS-CSEEEEEECSSSCEE----EEEECSSEEEEEEEECCG-GGCEEEEEEEEEET
T ss_pred CCCcEEEEEecCCC-CCEEEEEECCCccCc----cccCCCceEEEEeCCCcc-ccCEEEEEEEECCC
Confidence 99999999999865 469999999976643 122345677899999999 99999999999874
No 218
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.80 E-value=8.2e-19 Score=168.68 Aligned_cols=175 Identities=19% Similarity=0.184 Sum_probs=127.1
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE---E--c---------cCCCCEEEeecCCccceEEEEEEc
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE---P--L---------QETDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~---~--~---------~~~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
.|.|...|..+.+.+|++++|.|.+.+.|.+.+.|++++. . + ....++.+.... ...+|+|.
T Consensus 1 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~ 76 (213)
T 3r06_A 1 DIQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSG----RDSSFTIS 76 (213)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEES
T ss_pred CCeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccC----CEEEEEEC
Confidence 3678888999999999999999999998889999998421 0 0 112344443211 23569999
Q ss_pred ccCCCCCeEEEEEEEcCCee-EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCC--CeEEEeECCEEc
Q psy2775 78 SIKKREEGVYTVVAKNREGE-AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPS--PKVEWYKDGKLI 154 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~~~-~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~--~~v~W~~~g~~~ 154 (785)
+++.+|+|.|+|.|.+..+. ......|.|. ....+|.+...+.......|+.+.|.|.+.|.++ +.++|++||..+
T Consensus 77 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l 155 (213)
T 3r06_A 77 SLESEDIGSYYCQQYYNYPWTFGPGTKLEIK-RADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEK 155 (213)
T ss_dssp SCCGGGCSEEEEEECSSSSCEECCCEEEEEC-CCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEE
T ss_pred CCCcccCEEEEEecccCCceEEcCCceEEEe-ccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCccc
Confidence 99999999999999987542 2333456663 2346777776555556667889999999987654 389999999998
Q ss_pred ccce-E----EE-eCC----EEEEEEcccCCCCcEEEEEEEEcCCee
Q psy2775 155 KDRQ-I----TS-EKN----THTLTLIQCSTKDKGRYSVKVTNKEGT 191 (785)
Q Consensus 155 ~~~~-~----~~-~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 191 (785)
.... . .. ..+ ...|.|.....+|+|.|+|.|.|....
T Consensus 156 ~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 156 RDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp CTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred CCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 7542 1 01 111 246888888889999999999998643
No 219
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.80 E-value=5.9e-19 Score=174.89 Aligned_cols=184 Identities=15% Similarity=0.196 Sum_probs=126.1
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---cc-------------CCCCEEEeecCCccceEEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---LQ-------------ETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~~-------------~~~~~~~~~~~~~~~~~~~L~i 76 (785)
..|..+.+.+|++|+|.|.+.|.| .+.|.|++++ .. +. ...++.+..+.. ....+|+|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~I 82 (257)
T 1f3r_B 5 LESGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTS--KNQVFLKM 82 (257)
T ss_dssp EEECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETT--TTEEEEEE
T ss_pred ECCCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECC--CCEEEEEE
Confidence 345567899999999999999875 6899999862 11 10 123444433211 12356999
Q ss_pred cccCCCCCeEEEEEEEcCCe-------eEE--EEeeEEEeCCCC-----------CCCceecCCCceEeccCCcEEEEEE
Q psy2775 77 KSIKKREEGVYTVVAKNREG-------EAK--MDIPVKVNTGKP-----------EKPSILEPLHDVSITEGESAVLSVQ 136 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~-------~~~--~~~~v~v~~~~~-----------~~p~i~~~~~~~~~~~G~~v~l~C~ 136 (785)
.+++.+|+|.|+|.|.|..| ... ....|.|..... .++.+...+..+.+.+|+.++|.|.
T Consensus 83 ~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 162 (257)
T 1f3r_B 83 NSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCK 162 (257)
T ss_dssp ESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEE
T ss_pred CCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEE
Confidence 99999999999999999853 211 234666654210 1233445556777899999999999
Q ss_pred EeccCCCeEEEeE--CCEEcc-------------cc--eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEE
Q psy2775 137 VGGEPSPKVEWYK--DGKLIK-------------DR--QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLN 199 (785)
Q Consensus 137 ~~g~p~~~v~W~~--~g~~~~-------------~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 199 (785)
+.+.|.+.+.|+| +|..+. .. .........+|+|.+++.+|+|.|.|.|.|........+.|.
T Consensus 163 ~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~g~gt~l~ 242 (257)
T 1f3r_B 163 GSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNGYTFGAGTKLE 242 (257)
T ss_dssp CSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSSEEECCCCEEC
T ss_pred ECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCCCeECCCEEEE
Confidence 9988888999999 665431 01 112234567899999999999999999999752222335666
Q ss_pred eec
Q psy2775 200 VDP 202 (785)
Q Consensus 200 V~~ 202 (785)
|..
T Consensus 243 V~~ 245 (257)
T 1f3r_B 243 LKA 245 (257)
T ss_dssp CSS
T ss_pred EeC
Confidence 653
No 220
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.80 E-value=1.7e-18 Score=163.05 Aligned_cols=163 Identities=13% Similarity=0.171 Sum_probs=116.3
Q ss_pred eeecCCceEecCCCeEEEEEEEEe-cCCCeeEEEECCEEcc---CC---------------CCEEEeecCCccceEEEEE
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVA-VPEPDLLWYYNGEPLQ---ET---------------DEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g-~p~~~i~W~~~~~~~~---~~---------------~~~~~~~~~~~~~~~~~L~ 75 (785)
|+..|..+.+.+|++|+|.|.+.+ .+.+.|.|++++..+. .. .|..+. . ..+|+
T Consensus 1 ~s~~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~--~-----~~sL~ 73 (193)
T 2if7_A 1 MSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT--Q-----SYSLQ 73 (193)
T ss_dssp --CCCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC--T-----TCCEE
T ss_pred CCCCCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC--C-----CeEEE
Confidence 345688899999999999999865 4457899999986542 11 122222 1 13499
Q ss_pred EcccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCC-cEEEEEEEecc-CCCeEEEeECCEE
Q psy2775 76 IKSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGE-SAVLSVQVGGE-PSPKVEWYKDGKL 153 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~-~v~l~C~~~g~-p~~~v~W~~~g~~ 153 (785)
|.+++.+|+|.|+|.|.+..+.....+.|.|.. .+..|.+.... .....|. .+.|.|.+.|. |.+.|+|+++|..
T Consensus 74 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~-~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~ 150 (193)
T 2if7_A 74 LSNLKMEDTGSYRAQISTKTSAKLSSYTLRILR-QLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNT 150 (193)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC-CCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEE
T ss_pred ECCCCcccCceEEEEEEecCCCeEEEEEEEEEc-cCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEE
Confidence 999999999999999999988766777888864 22234444433 1233465 89999999984 5789999999987
Q ss_pred cccceEEEeCCEEEEEEcccCCC-CcEEEEEEEEcCCeeEEEE
Q psy2775 154 IKDRQITSEKNTHTLTLIQCSTK-DKGRYSVKVTNKEGTVESA 195 (785)
Q Consensus 154 ~~~~~~~~~~~~~~L~i~~~~~~-d~G~Y~C~a~n~~g~~~~~ 195 (785)
+... ..|.|.....+ |+|.|+|.|.|..|..+..
T Consensus 151 l~~~--------~~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 151 LSSQ--------PNLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp EESS--------SEEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred cCCC--------CeEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 6321 24666544454 8999999999999987543
No 221
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.80 E-value=6.4e-19 Score=172.93 Aligned_cols=217 Identities=12% Similarity=0.099 Sum_probs=126.5
Q ss_pred CCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEE----EeCCEEEEEEcccCCCCcEEEEEEEEc
Q psy2775 112 EKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQIT----SEKNTHTLTLIQCSTKDKGRYSVKVTN 187 (785)
Q Consensus 112 ~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n 187 (785)
.+|.|...+. ..+.+|++++|.|.+.+ +.+.+.|+|+|..+...... .......|.|.+++.+|+|.|+|.+.+
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 5677776654 67889999999999964 56799999998765422111 122456899999999999999999986
Q ss_pred CCe-----eEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccC
Q psy2775 188 KEG-----TVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE 262 (785)
Q Consensus 188 ~~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~ 262 (785)
..+ ..+..+.|.|.... .+|.+...+. ..+.+|++++|.|.+.+.
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~-----------------------------~~P~l~~~p~-~~V~~G~~vtL~C~~~~~ 133 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLY-----------------------------EKPSLSAQPG-PTVLAGESVTLSCSSRSS 133 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSS-----------------------------CCCEEECSSC-TTCBTTCEEEEEEECSSC
T ss_pred cCCCccccccCCCEEEecccCC-----------------------------CCcceEccCC-CccCCCCEEEEEEeCCCC
Confidence 532 23445677776432 3455655443 467899999999999775
Q ss_pred CCCeEEEEECCEEcccce--EEE--eCCEEEEEEccCCCCCCeEEEEEEEeCCC-----ceEEEEEEEEeccccceeeec
Q psy2775 263 PSPKVEWYKDGKLIKDRQ--ITS--EKNTHTLTLIQCSTKDKGRYSVKVTNKEG-----TVESAANLNVDQGKAEFIKKL 333 (785)
Q Consensus 263 p~~~v~W~~~~~~l~~~~--~~~--~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g-----~~~~~~~l~v~~~~~~~~~~~ 333 (785)
++.+.|+|+|..+.... ... ......|.|.+++ |+|.|+|.+.+... ..+..+.|.|...|......+
T Consensus 134 -~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~~~~p~~ 210 (257)
T 1b6u_A 134 -YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSP 210 (257)
T ss_dssp -CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-------
T ss_pred -CcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCCCCCCCC
Confidence 46999999997664211 111 1236789999998 99999999997532 122336777776433221112
Q ss_pred cceeEeeCccEEEEEEEcCCCCeEEEEECC
Q psy2775 334 DDLEVKERENAVLEVEVTSDKADVKWFKDG 363 (785)
Q Consensus 334 ~~~~~~~g~~~~l~C~~~~~~~~v~W~~~~ 363 (785)
.......|..+.|.|.+..+.+.+.|..-+
T Consensus 211 ~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 211 TEPSSETGNPRHLHAAAEQKLISEEDLNLD 240 (257)
T ss_dssp ------------------------------
T ss_pred cccCccCCCeEEEEEEEcchHHHHHHhhhh
Confidence 223456788999999888788899997543
No 222
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.80 E-value=5.6e-19 Score=170.61 Aligned_cols=179 Identities=12% Similarity=0.183 Sum_probs=122.3
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEcc-----------------CCCCEEEeecCCccceEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPLQ-----------------ETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~L~ 75 (785)
..|..+.+.+|++++|.|.+.+.+ .+.+.|++++ ..+. ...++.+..+.. ....+|+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~ 82 (219)
T 1c1e_H 5 VQSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETS--ATTAYLQ 82 (219)
T ss_dssp EECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGG--GTEEEEE
T ss_pred eCCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecC--CCEEEEE
Confidence 456778999999999999998875 6889999973 2211 123444433211 1235799
Q ss_pred EcccCCCCCeEEEEEEEcCCe----eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCC-eEEEeE
Q psy2775 76 IKSIKKREEGVYTVVAKNREG----EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVEWYK 149 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~----~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~W~~ 149 (785)
|.+++.+|+|.|+|.|.+..+ .......|.|....+.+|.+........+.+|+.+.|.|.+.| .|.+ .|+|++
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 162 (219)
T 1c1e_H 83 INNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (219)
T ss_dssp ECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEe
Confidence 999999999999999998763 1223456777653445566654443445678999999999988 8888 999999
Q ss_pred CCEEcccc---eEEEeC---CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEE
Q psy2775 150 DGKLIKDR---QITSEK---NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANL 198 (785)
Q Consensus 150 ~g~~~~~~---~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 198 (785)
+|..+... .....+ ....|.|..... |.|.|+|.|.|..+.......+
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-d~g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 163 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPR-PSETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp GTBCTTEEECCCEESSSCEEEEEEEEEESSST-TTSCCEEEEEEGGGTEEEEEEC
T ss_pred CCcccceEecCCcccCCeEEEEEEEEEecccC-CCCEEEEEEEeCCCCccEEEec
Confidence 99865321 111111 124688854444 5699999999998765544433
No 223
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.80 E-value=2.4e-18 Score=170.55 Aligned_cols=179 Identities=15% Similarity=0.236 Sum_probs=127.6
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEec--CCCeeEEEECC--EEc-----------------cCCCCEEEeecCCcc
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNG--EPL-----------------QETDEVVFSDQSDMH 68 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~--~~~-----------------~~~~~~~~~~~~~~~ 68 (785)
..+|.|...+..+.+.+|++|+|.|.+.+. +.+.+.|++.. ..+ ....++.+..+....
T Consensus 4 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 4 HHHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp ---CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred ccceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 467888999999999999999999999873 66789999843 110 012344444322221
Q ss_pred ceEEEEEEcccCCCCCeEEEEEEEcC------------CeeEEEEeeEEEeCCCC-----------CCCceecCCCceEe
Q psy2775 69 SYVSIVTIKSIKKREEGVYTVVAKNR------------EGEAKMDIPVKVNTGKP-----------EKPSILEPLHDVSI 125 (785)
Q Consensus 69 ~~~~~L~i~~~~~~D~G~Y~C~a~~~------------~~~~~~~~~v~v~~~~~-----------~~p~i~~~~~~~~~ 125 (785)
..+|+|.+++.+|+|.|.|.+.+. .........|.|..... .+|.+...+....+
T Consensus 84 --~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 161 (256)
T 3juy_B 84 --TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSL 161 (256)
T ss_dssp --EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEE
T ss_pred --EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEE
Confidence 256999999999999999999986 33333445677764221 14567777788899
Q ss_pred ccCCcEEEEEEEeccCC-CeEEEeEC--CEEcc-------------cc--eEEEeCCEEEEEEcccCCCCcEEEEEEEEc
Q psy2775 126 TEGESAVLSVQVGGEPS-PKVEWYKD--GKLIK-------------DR--QITSEKNTHTLTLIQCSTKDKGRYSVKVTN 187 (785)
Q Consensus 126 ~~G~~v~l~C~~~g~p~-~~v~W~~~--g~~~~-------------~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 187 (785)
.+|++++|.|.+.+.+. +.+.|+|. +..+. .. .........+|.|.+++.+|+|.|.|.|.|
T Consensus 162 ~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 241 (256)
T 3juy_B 162 SPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYG 241 (256)
T ss_dssp CTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECC
T ss_pred eCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEee
Confidence 99999999999988776 89999982 22211 01 122344567899999999999999999988
Q ss_pred CCe
Q psy2775 188 KEG 190 (785)
Q Consensus 188 ~~g 190 (785)
...
T Consensus 242 ~~~ 244 (256)
T 3juy_B 242 ASS 244 (256)
T ss_dssp SSC
T ss_pred CCC
Confidence 654
No 224
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.79 E-value=9.2e-19 Score=171.50 Aligned_cols=176 Identities=16% Similarity=0.187 Sum_probs=127.8
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE--E------------ccCCCCEEEeecCCccceEEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE--P------------LQETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~L~i 76 (785)
..+.+...|..+.+.+|++++|.|.+.+.+.+.+.|++++. . .....++...... ...+|+|
T Consensus 23 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I 98 (237)
T 3sob_L 23 ADIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG----TDFTLTI 98 (237)
T ss_dssp -CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEE
T ss_pred ccceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCC----CEEEEEE
Confidence 34677788999999999999999999888889999998431 0 0112344443221 2356999
Q ss_pred cccCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cC-CCeEEEeECCEE
Q psy2775 77 KSIKKREEGVYTVVAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EP-SPKVEWYKDGKL 153 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p-~~~v~W~~~g~~ 153 (785)
.+++.+|+|.|+|.+.+..+.. .....+.|.. ...+|.+...........|+.+.|.|.+.+ .| .+.|+|++||..
T Consensus 99 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~ 177 (237)
T 3sob_L 99 SSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKR-TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNAL 177 (237)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEEC-CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CCCChhhCeEEEEeeccCCceEEcCcEEEEEec-CCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCC
Confidence 9999999999999998876532 2334566644 446677765555555567899999999987 44 579999999999
Q ss_pred cccceE-----EE-eCC----EEEEEEcccCCCCcEEEEEEEEcCCee
Q psy2775 154 IKDRQI-----TS-EKN----THTLTLIQCSTKDKGRYSVKVTNKEGT 191 (785)
Q Consensus 154 ~~~~~~-----~~-~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 191 (785)
+..... .. .++ ..+|.|.....+|+|.|+|.|.|....
T Consensus 178 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 178 QSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp CCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred CCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 875320 00 111 356889999999999999999998754
No 225
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.79 E-value=1.9e-19 Score=175.70 Aligned_cols=164 Identities=20% Similarity=0.275 Sum_probs=118.8
Q ss_pred cCCCeEEecCCcEEEEEEEeCCC--ceEEEEECCEEcc---------c----CCCEE----------EEEeCcEEEEEEc
Q psy2775 421 PLQDVKVSRDEKASFEIELTKGD--ALVKWYKDGKEIA---------F----SENVT----------LSIDGKKQKLIIF 475 (785)
Q Consensus 421 ~~~~~~v~~g~~~~l~C~~~~~~--~~i~W~~~~~~~~---------~----~~~~~----------~~~~~~~~~L~i~ 475 (785)
.+....+.+|+.+.|.|.+.+.+ +.+.|++++.... . ..++. +..++ .|.|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~---~L~i~ 82 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQG---RLVLA 82 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTC---CEEES
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCc---eEEEc
Confidence 45677889999999999999843 6899998654311 0 11111 22122 39999
Q ss_pred cCCCCCcEEEEEEEeec--CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 476 SAGLEDAGEYSCRVGDT--GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~--g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
+++.+|+|.|+|.|.|. +.....+.|.|..++..
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~-------------------------------------------- 118 (231)
T 2pet_A 83 EAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEA-------------------------------------------- 118 (231)
T ss_dssp SCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCC--------------------------------------------
T ss_pred ccCcccCceEEEEEEecCCCceEEEEEEEEEecCCC--------------------------------------------
Confidence 99999999999999985 56667788888876421
Q ss_pred CCCCCCeEeeeeeeeeeeecCeE-EEEEEE-ecCCCCceEEEeCCEEecCCC----CeeEEee----C-C----eEEEEE
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTI-RLMAKV-KASPAPSIVWFRNNKPLLSSP----KKREIFD----G-E----NIILEL 618 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v-~l~C~~-~g~P~p~v~W~~~~~~i~~~~----~~~~~~~----~-~----~~~L~i 618 (785)
|.+........+.+|+.+ +|.|.+ .|.|.|.|.|+|+|..+.... +..+... . + .++|.|
T Consensus 119 -----~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i 193 (231)
T 2pet_A 119 -----TEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYL 193 (231)
T ss_dssp -----CEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred -----cEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEE
Confidence 344444445667789988 999999 899999999999999987665 3333221 1 1 256888
Q ss_pred ccCCCCCCceeEEEEEEcC
Q psy2775 619 KEADSETDAGDYKVVATNE 637 (785)
Q Consensus 619 ~~~~~~~d~G~Y~C~a~n~ 637 (785)
..... +|+|.|+|.|.|.
T Consensus 194 ~~~~~-dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 194 RLRKD-DRDASFHCAAHYS 211 (231)
T ss_dssp ECCGG-GGGCEEEEEEEEE
T ss_pred ecchh-hCCceEEEEEEcC
Confidence 75554 6799999999994
No 226
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.79 E-value=4.6e-19 Score=147.62 Aligned_cols=96 Identities=31% Similarity=0.342 Sum_probs=89.3
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEE
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
+.+.||.|+..++++.+.+|++++|.|.+.|+|.|.|+|+|||..|..+.++.+..++..++|.|.++.. +|+|.|+|.
T Consensus 9 ~~~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~ 87 (107)
T 3knb_B 9 DQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALP-TDAGVYVCR 87 (107)
T ss_dssp -CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCG-GGCEEEEEE
T ss_pred CCCCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCCh-hhCEEEEEE
Confidence 3456799999999999999999999999999999999999999999988888888888889999999999 999999999
Q ss_pred EEcCCcceEEEEEEEEE
Q psy2775 634 ATNELGSATHGARVTVD 650 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~ 650 (785)
|.|..|....++.|.|.
T Consensus 88 a~N~~G~~~~~~~l~V~ 104 (107)
T 3knb_B 88 ARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEECCCEEEEEEEEEEE
Confidence 99999999999988887
No 227
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.79 E-value=4.5e-18 Score=167.63 Aligned_cols=190 Identities=14% Similarity=0.159 Sum_probs=129.0
Q ss_pred CCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EEc-----------------ccCCCEEEEEe--CcEEEEEEccCC
Q psy2775 423 QDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KEI-----------------AFSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
....+.+|++++|.|.+.+ + .+.+.|+|++ ..+ ....++.+..+ +...+|+|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 4577889999999999998 3 4679999842 111 12346666654 346789999999
Q ss_pred CCCcEEEEEEEeec-Cc--ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 479 LEDAGEYSCRVGDT-GD--KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~-g~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
.+|+|.|+|.|.|. +. ....+.|.|..++..- +... + ...
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~----~~~~---------~------------------------~~~ 132 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGS----GGGG---------S------------------------GGG 132 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------------------------------------------
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEecccccc----cccc---------c------------------------CCC
Confidence 99999999999995 22 1234567776542100 0000 0 000
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEe--CCEEec------------CCCCeeEEeeCCeEEEEEccC
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFR--NNKPLL------------SSPKKREIFDGENIILELKEA 621 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~--~~~~i~------------~~~~~~~~~~~~~~~L~i~~~ 621 (785)
..+|.+...+....+.+|++++|.|.+.|.|.|.+.|+| ++..+. ...++.....+...+|+|.++
T Consensus 133 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 212 (247)
T 2ghw_B 133 GSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRL 212 (247)
T ss_dssp -CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSC
T ss_pred CcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcC
Confidence 012455555667789999999999999999999999999 554331 123444444556778999999
Q ss_pred CCCCCceeEEEEEEcCCcceEE-EEEEEEE
Q psy2775 622 DSETDAGDYKVVATNELGSATH-GARVTVD 650 (785)
Q Consensus 622 ~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~ 650 (785)
.. +|+|.|+|.|.|..+.... ...|.|.
T Consensus 213 ~~-~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 213 EP-EDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp CG-GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CH-HHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 99 9999999999997544332 2455554
No 228
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.79 E-value=1.1e-18 Score=167.51 Aligned_cols=174 Identities=15% Similarity=0.159 Sum_probs=121.6
Q ss_pred CCCeEEecCCcEEEEEEEeC-C---CceEEEEECC--EEc------------ccCCCEEEEEeCcEEEEEEccCCCCCcE
Q psy2775 422 LQDVKVSRDEKASFEIELTK-G---DALVKWYKDG--KEI------------AFSENVTLSIDGKKQKLIIFSAGLEDAG 483 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~-~---~~~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G 483 (785)
+....+.+|++++|.|.+.+ + .+.+.|++++ ..+ ....++.+...+....|+|.+++.+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 56677899999999999987 4 3689999852 222 1235666666667789999999999999
Q ss_pred EEEEEEeec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeE
Q psy2775 484 EYSCRVGDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLF 561 (785)
Q Consensus 484 ~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~ 561 (785)
.|+|.|.|. +. ......|.|...+. .+|.+
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------------~~P~v 118 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQPK------------------------------------------------SSPTV 118 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSCC------------------------------------------------BCCEE
T ss_pred EEEEEEecCchhhcCCCeEEEEecCCC------------------------------------------------CCCee
Confidence 999999996 32 12345566643210 01444
Q ss_pred eeeeeeeeeeecCeEEEEEEEecCC-CC-ceEEEeCCEEecCCCCee-EEee-CC----eEEEEEccCCCCCCceeEEEE
Q psy2775 562 IERFEEKTVKEKGTIRLMAKVKASP-AP-SIVWFRNNKPLLSSPKKR-EIFD-GE----NIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 562 ~~~~~~~~v~~g~~v~l~C~~~g~P-~p-~v~W~~~~~~i~~~~~~~-~~~~-~~----~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
........+..|+.++|.|.+.|.| +| .|.|+|+|..+..+.... .... ++ .+.|.|..+.. +|+|.|+|.
T Consensus 119 ~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C~ 197 (212)
T 1q0x_L 119 TLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAW-ERHSSYSCQ 197 (212)
T ss_dssp EEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHH-TTCCEEEEE
T ss_pred EEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHc-cCCCcEEEE
Confidence 4333333445799999999999864 44 899999999986542211 1111 11 24689999888 899999999
Q ss_pred EEcCCcceEEE
Q psy2775 634 ATNELGSATHG 644 (785)
Q Consensus 634 a~n~~g~~~~~ 644 (785)
|.|..+....+
T Consensus 198 a~n~~~~~~~~ 208 (212)
T 1q0x_L 198 VTHEGHSSNKT 208 (212)
T ss_dssp EEETTEEEEEE
T ss_pred EEeCCcceeee
Confidence 99987765443
No 229
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.79 E-value=6.3e-19 Score=174.48 Aligned_cols=241 Identities=12% Similarity=0.087 Sum_probs=109.6
Q ss_pred CCceEeccCCcEEEEEEEeccCCC-eEEEeE--CCEEcccceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEE
Q psy2775 120 LHDVSITEGESAVLSVQVGGEPSP-KVEWYK--DGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAA 196 (785)
Q Consensus 120 ~~~~~~~~G~~v~l~C~~~g~p~~-~v~W~~--~g~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 196 (785)
+....+.+|+.+.|+|.+.. +.+ .+.|.- ++..+. ........|.|.++..+ |.|+|++.......+..+
T Consensus 6 P~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~----~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v 78 (291)
T 1mq8_A 6 PSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELL----LPGNNRKVYELSNVQED--SQPMCYSNCPDGQSTAKT 78 (291)
T ss_dssp CSEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCC----CSCSSEEEEEEESCCSC--CCCEEEEECSSCEEEEEC
T ss_pred CCccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccc----cCCCceEEEEEEecccC--CeEEEEEEcCCccEEEEE
Confidence 35678899999999999964 444 488853 111110 11223346788887754 469999986655566667
Q ss_pred EEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccC-CCC--eEEEEECC
Q psy2775 197 NLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP--KVEWYKDG 273 (785)
Q Consensus 197 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~~--~v~W~~~~ 273 (785)
.|.|...| ..|.+... ...+.+|+.++|.|.+.+. |.. .|+|+|++
T Consensus 79 ~l~V~~~P-----------------------------~~v~I~~~--~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~ 127 (291)
T 1mq8_A 79 FLTVYWTP-----------------------------ERVELAPL--PSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGE 127 (291)
T ss_dssp EEEECBCC-----------------------------SCCCBCCC--CSBCCSSCCCEEEEEECCCBSTTTEEEEEESSS
T ss_pred EEEEecCC-----------------------------CCCEEecC--CccccCCCCEEEEEEecCccCCCCcEEEEEECC
Confidence 78887543 22233322 2347889999999999764 444 58999999
Q ss_pred EEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCc--------eEEEEEEEEeccccceeeeccceeEeeCccEE
Q psy2775 274 KLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGT--------VESAANLNVDQGKAEFIKKLDDLEVKERENAV 345 (785)
Q Consensus 274 ~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~--------~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~ 345 (785)
+.+............+|.+.....+|++.|+|+|.|..+. .+....|.|.+.|+.......+..+.+|+.++
T Consensus 128 ~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~ 207 (291)
T 1mq8_A 128 KELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGT 207 (291)
T ss_dssp SEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----------------------
T ss_pred EEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEE
Confidence 8876333222233557888888888888999999987552 22336788887654422212233678999999
Q ss_pred EEEEEcC-CCC---eEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCC---CC--CCceEEEEEEeccc
Q psy2775 346 LEVEVTS-DKA---DVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNI---SV--HDEGEYTCSLPDQE 404 (785)
Q Consensus 346 l~C~~~~-~~~---~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~---~~--~d~G~Y~C~a~n~~ 404 (785)
|.|.+.+ +++ .+.|+++|+.+..... .+|.. +.+... .. ++.+.|+|.|.+..
T Consensus 208 l~C~~~g~~P~~~~~v~w~~~g~~l~~~~~----~~g~~--~~~~~~~~~~~~~~~~~~~~C~~~~~~ 269 (291)
T 1mq8_A 208 VVCSLDGLFPVSEAQVHLALGDQRLNPTVT----YGNDS--FSAKASVSVTAEDEGTQRLTCAVILGN 269 (291)
T ss_dssp --------------------------------------------------------------------
T ss_pred EEEEcCCCCCCcccEEEEEECCEecCceee----ecCCe--EEEEEecceeEcCCCCEEEEEEEEeCC
Confidence 9999997 343 6999999998875321 11221 223222 23 34678889998644
No 230
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.79 E-value=6.5e-18 Score=167.02 Aligned_cols=176 Identities=15% Similarity=0.220 Sum_probs=126.3
Q ss_pred CCCeEEecCCcEEEEEEEeCC---CceEEEEEC--CEEc-----------------ccCCCEEEEEe--CcEEEEEEccC
Q psy2775 422 LQDVKVSRDEKASFEIELTKG---DALVKWYKD--GKEI-----------------AFSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~--~~~~-----------------~~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
+....+.+|++++|.|.+.+. .+.+.|+|+ +..+ ....++.+..+ +....|+|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (256)
T 1nqb_A 7 SGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSL 86 (256)
T ss_dssp CCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcC
Confidence 456788999999999999873 568999994 2221 01356666654 45678999999
Q ss_pred CCCCcEEEEEEEeec-Cc-----ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccC
Q psy2775 478 GLEDAGEYSCRVGDT-GD-----KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCP 551 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g~-----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 551 (785)
+.+|+|.|+|.|.|. |. ......|.|..+
T Consensus 87 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~--------------------------------------------- 121 (256)
T 1nqb_A 87 TSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD--------------------------------------------- 121 (256)
T ss_dssp CGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCC---------------------------------------------
T ss_pred ChhhCEEEEEEEeeccCccceeEEcCceeeeeccc---------------------------------------------
Confidence 999999999999996 42 112355666533
Q ss_pred CCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCC-----ceEEEe--CCEEec------------CCCCeeEEeeCC
Q psy2775 552 LGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAP-----SIVWFR--NNKPLL------------SSPKKREIFDGE 612 (785)
Q Consensus 552 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p-----~v~W~~--~~~~i~------------~~~~~~~~~~~~ 612 (785)
|.+...+....+.+|++++|.|.+.|.|.+ .|.|+| +|..+. ...++.......
T Consensus 122 -------~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 194 (256)
T 1nqb_A 122 -------IELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGT 194 (256)
T ss_dssp -------CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETT
T ss_pred -------ccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCC
Confidence 333344456678999999999999999875 999999 555431 123444444566
Q ss_pred eEEEEEccCCCCCCceeEEEEEEcCCcceEE-EEEEEEE
Q psy2775 613 NIILELKEADSETDAGDYKVVATNELGSATH-GARVTVD 650 (785)
Q Consensus 613 ~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~ 650 (785)
.++|+|.+++. +|+|.|+|.|.|..+.... ...|.|.
T Consensus 195 ~~~L~I~~v~~-~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 232 (256)
T 1nqb_A 195 DFTLKISRVEA-EDLGVYYCFQGSHVPYTFGGGTKLEIK 232 (256)
T ss_dssp EEEEEESSCCG-GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEECCCCh-HHCEEEEEEEccCCceEECCCEEEEEE
Confidence 78899999999 9999999999986543322 2455554
No 231
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.79 E-value=2.7e-18 Score=169.97 Aligned_cols=188 Identities=15% Similarity=0.227 Sum_probs=129.3
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EE---c----------cCCCCEEEeecCCccceEEEEEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EP---L----------QETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~---~----------~~~~~~~~~~~~~~~~~~~~L~i 76 (785)
+..+...|..+.+.+|++|+|.|.+.+.|.+.+.|++.. .. + ....++.+..... ....+|+|
T Consensus 3 ~~~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~sL~I 80 (256)
T 3tf7_C 3 AQSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKS--DSSFHLRK 80 (256)
T ss_dssp -CEEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETT--TTEEEEEE
T ss_pred ccEEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCC--CCEEEEEE
Confidence 456788889999999999999999999899999999842 11 0 0122333321111 12356999
Q ss_pred cccCCCCCeEEEEEEEcCCe----eEEEEeeEEEeCC----------------CCCCCceecCCCceEeccCCcEEEEEE
Q psy2775 77 KSIKKREEGVYTVVAKNREG----EAKMDIPVKVNTG----------------KPEKPSILEPLHDVSITEGESAVLSVQ 136 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~----~~~~~~~v~v~~~----------------~~~~p~i~~~~~~~~~~~G~~v~l~C~ 136 (785)
.+++.+|+|.|.|.+.+..+ .......|.|... ...+|.+...+....+.+|+.++|.|.
T Consensus 81 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~ 160 (256)
T 3tf7_C 81 ASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCR 160 (256)
T ss_dssp SSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEE
T ss_pred CCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEE
Confidence 99999999999999998754 1222345666531 234677888888888899999999999
Q ss_pred EeccCCCeEEEeECC--EEccc----------------ceEE---EeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEE-
Q psy2775 137 VGGEPSPKVEWYKDG--KLIKD----------------RQIT---SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVES- 194 (785)
Q Consensus 137 ~~g~p~~~v~W~~~g--~~~~~----------------~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~- 194 (785)
+.+. .+.+.|+|.. ..+.. ..+. ......+|+|.+++.+|+|.|+|.|.|..|....
T Consensus 161 ~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG 239 (256)
T 3tf7_C 161 QTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFG 239 (256)
T ss_dssp ECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEEC
T ss_pred cCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEEC
Confidence 9876 6799999832 11100 0000 1234558999999999999999999998765433
Q ss_pred -EEEEEeec
Q psy2775 195 -AANLNVDP 202 (785)
Q Consensus 195 -~~~l~V~~ 202 (785)
...|.|.+
T Consensus 240 ~gt~l~v~~ 248 (256)
T 3tf7_C 240 EGSKLTVLE 248 (256)
T ss_dssp CCEEEEEEC
T ss_pred CCeEEEEEc
Confidence 35666653
No 232
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.79 E-value=1.8e-18 Score=171.03 Aligned_cols=188 Identities=12% Similarity=0.193 Sum_probs=131.0
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecC--CCeeEEEEC--CEE---c--------------cCCCCEEEeecCCccceEE
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYN--GEP---L--------------QETDEVVFSDQSDMHSYVS 72 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~--~~~---~--------------~~~~~~~~~~~~~~~~~~~ 72 (785)
.++..|..+.+.+|++|+|.|.+.+.+ .+.+.|++. +.. + ....++.+..+.... ..
T Consensus 3 ~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~--~~ 80 (253)
T 3uzq_A 3 KLLEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSN--TA 80 (253)
T ss_dssp CCEEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTT--EE
T ss_pred eeEecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCC--eE
Confidence 356778899999999999999998754 678999983 111 1 112344444333222 25
Q ss_pred EEEEcccCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCC-----------CCCCCceecCCCceEeccCCcEEEEEEEecc
Q psy2775 73 IVTIKSIKKREEGVYTVVAKNREGEA-KMDIPVKVNTG-----------KPEKPSILEPLHDVSITEGESAVLSVQVGGE 140 (785)
Q Consensus 73 ~L~i~~~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~-----------~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~ 140 (785)
+|+|.+++.+|+|.|.|.|.+..+.. .....|.|... ...+|.+...+....+.+|++++|.|.+.+.
T Consensus 81 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 160 (253)
T 3uzq_A 81 YLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASEN 160 (253)
T ss_dssp EEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSC
T ss_pred EEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCc
Confidence 69999999999999999999865543 23455666531 1235677777778899999999999999887
Q ss_pred CCC----eEEEeEC--CEEcc---------------cceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEE-EEEEE
Q psy2775 141 PSP----KVEWYKD--GKLIK---------------DRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE-SAANL 198 (785)
Q Consensus 141 p~~----~v~W~~~--g~~~~---------------~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l 198 (785)
+.+ .+.|+|+ +..+. ...........+|+|.+++.+|+|.|.|.|.|..+... ..+.|
T Consensus 161 ~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l 240 (253)
T 3uzq_A 161 VDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKL 240 (253)
T ss_dssp CEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEE
T ss_pred cccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEE
Confidence 776 8999984 22211 01122344567899999999999999999998654322 23667
Q ss_pred EeecC
Q psy2775 199 NVDPY 203 (785)
Q Consensus 199 ~V~~~ 203 (785)
.|...
T Consensus 241 ~v~~~ 245 (253)
T 3uzq_A 241 EIKRP 245 (253)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 77643
No 233
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.79 E-value=1.5e-18 Score=167.07 Aligned_cols=175 Identities=15% Similarity=0.223 Sum_probs=120.2
Q ss_pred eecCCceEecCCCeEEEEEEEEec-------CCCeeEEEECCEEc-----------------cCCCCEEEeecCCccceE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAV-------PEPDLLWYYNGEPL-----------------QETDEVVFSDQSDMHSYV 71 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~-------p~~~i~W~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 71 (785)
...|..+.+.+|++++|.|.+.+. +.+.+.|++++... ....++.+..+. ....
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~ 81 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDV--QKKN 81 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCG--GGTB
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccC--CCCe
Confidence 456888999999999999999754 46789999987521 011344433221 1112
Q ss_pred EEEEEcccCCCCCeEEEEEEEcCCeeEE----EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc----CCC
Q psy2775 72 SIVTIKSIKKREEGVYTVVAKNREGEAK----MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE----PSP 143 (785)
Q Consensus 72 ~~L~i~~~~~~D~G~Y~C~a~~~~~~~~----~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~----p~~ 143 (785)
.+|+|.+++.+|+|.|.|.+.+..+... ..+.|.|.. .+.+|.+..+. .+.+|+.+.|.|.+.+. |.+
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~-~~~~p~i~~~~---~~~~G~~v~L~C~~~~~~~~~p~p 157 (214)
T 2zg1_A 82 CSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTA-LIEKPDIHFLE---PLESGRPTRLSCSLPGSCEAGPPL 157 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEEC-CCCCCEEC--C---CCCTTCCEEEEEECTTCCSCSSCC
T ss_pred EEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEec-CCCCCceecCc---cccCCCeEEEEEEeccCCCCCCCc
Confidence 3599999999999999999998763322 346677763 23356665432 26789999999999764 788
Q ss_pred eEEEeECCEEcccceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEE
Q psy2775 144 KVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLN 199 (785)
Q Consensus 144 ~v~W~~~g~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 199 (785)
.++|++++..+.... ......|.|..+..+|+|.|+|.|.|..+....+..++
T Consensus 158 ~v~W~~~~~~~~~~~---~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~ 210 (214)
T 2zg1_A 158 TFSWTGNALSPLDPE---TTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQ 210 (214)
T ss_dssp EEEEESSTTSSSCSS---CCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEE
T ss_pred eEEEeCCCCccCCCC---ceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEE
Confidence 999999986543221 13345799999999999999999999765443333333
No 234
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.79 E-value=1.6e-18 Score=167.24 Aligned_cols=178 Identities=17% Similarity=0.257 Sum_probs=121.7
Q ss_pred ccccCCCeEEecCCcEEEEEEEeCC--CceEEEEECC---EE------------cc---cCCCEEEEEeCcEEEEEEccC
Q psy2775 418 ISVPLQDVKVSRDEKASFEIELTKG--DALVKWYKDG---KE------------IA---FSENVTLSIDGKKQKLIIFSA 477 (785)
Q Consensus 418 ~~~~~~~~~v~~g~~~~l~C~~~~~--~~~i~W~~~~---~~------------~~---~~~~~~~~~~~~~~~L~i~~~ 477 (785)
+..++ ...+.+|++++|.|.+.+. .+.+.|+|.. .. .. ...++.+...+....|.|.++
T Consensus 4 v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 82 (218)
T 3s96_B 4 LTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNI 82 (218)
T ss_dssp EECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSC
T ss_pred EEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccC
Confidence 44455 7788999999999999874 6789999831 10 00 113666666667788999999
Q ss_pred CCCCcEEEEEEEeec-C-----cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccC
Q psy2775 478 GLEDAGEYSCRVGDT-G-----DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCP 551 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 551 (785)
+.+|+|.|+|.|.|. | .....+.|.|...+.
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------- 119 (218)
T 3s96_B 83 QPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPK------------------------------------------- 119 (218)
T ss_dssp CGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCC-------------------------------------------
T ss_pred CcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCC-------------------------------------------
Confidence 999999999999996 4 223456777775321
Q ss_pred CCCCCCCCeEeeeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecCCCCee-EEeeCC----eEEEEEccCCCC
Q psy2775 552 LGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLSSPKKR-EIFDGE----NIILELKEADSE 624 (785)
Q Consensus 552 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~~~~~~-~~~~~~----~~~L~i~~~~~~ 624 (785)
.+|.+........+..|+.++|.|.+.| .|.| .|.|+|+|..+..+.... ....++ ...|.|.....
T Consensus 120 -----~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~- 193 (218)
T 3s96_B 120 -----STPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQW- 193 (218)
T ss_dssp -----BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHH-
T ss_pred -----CCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHc-
Confidence 1144443333445567899999999998 5777 899999999986532211 111122 23488888877
Q ss_pred CCceeEEEEEEcCCcceEEEE
Q psy2775 625 TDAGDYKVVATNELGSATHGA 645 (785)
Q Consensus 625 ~d~G~Y~C~a~n~~g~~~~~~ 645 (785)
+|+|.|+|.|.|..|....++
T Consensus 194 ~d~g~Y~C~a~n~~~~~~~~~ 214 (218)
T 3s96_B 194 RSHNSFTCQVTHEGDTVEKSL 214 (218)
T ss_dssp HTCSCEEEEEEETTEEEEEEE
T ss_pred cCCCeEEEEEEeCCCcccccc
Confidence 889999999999988666543
No 235
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.78 E-value=9.7e-19 Score=169.28 Aligned_cols=178 Identities=11% Similarity=0.165 Sum_probs=124.0
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---cc----------------CCCCEEEeecCCccceEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---LQ----------------ETDEVVFSDQSDMHSYVSI 73 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~~----------------~~~~~~~~~~~~~~~~~~~ 73 (785)
..|..+.+.+|++++|.|.+.+.+ .+.+.|++++ .. +. ...++.+..+.. ....+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~ 82 (222)
T 1q9r_B 5 VESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNS--QSILY 82 (222)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETT--TTEEE
T ss_pred ecCCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECC--CCeEE
Confidence 346678999999999999998765 6789999853 11 10 023444443321 12356
Q ss_pred EEEcccCCCCCeEEEEEEEcCCe-----eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEE
Q psy2775 74 VTIKSIKKREEGVYTVVAKNREG-----EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVE 146 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~~-----~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~ 146 (785)
|+|.+++.+|+|.|.|.+.+..+ .......|.|....+.+|.+........+..|+.+.|.|.+.|. |.+ .|.
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 162 (222)
T 1q9r_B 83 LQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 162 (222)
T ss_dssp EEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEE
T ss_pred EEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEE
Confidence 99999999999999999998653 11223466776544456766544333346689999999999885 877 999
Q ss_pred EeECCEEcccceE--EEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEE
Q psy2775 147 WYKDGKLIKDRQI--TSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAAN 197 (785)
Q Consensus 147 W~~~g~~~~~~~~--~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 197 (785)
|+++|..+..... ....+ .+.|.|.++..+| |.|+|.|.|..|.......
T Consensus 163 W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~ 218 (222)
T 1q9r_B 163 WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 218 (222)
T ss_dssp EGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred EecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEe
Confidence 9999987643211 11122 3468999998889 9999999999886554443
No 236
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.78 E-value=2.8e-18 Score=168.10 Aligned_cols=172 Identities=15% Similarity=0.218 Sum_probs=119.0
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EEc---------------cCCCCEEEeecCCccceEEEEEE
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EPL---------------QETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~~---------------~~~~~~~~~~~~~~~~~~~~L~i 76 (785)
.|...|..+.+.+|++++|.|. .+.|.+.|.|++++ ..+ ....++.+..... ...+|+|
T Consensus 2 ~v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~~L~I 77 (238)
T 2p1y_A 2 AVTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQ---ENFSLIL 77 (238)
T ss_dssp CEEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSS---SBCEEEE
T ss_pred cceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCC---ceEEEEE
Confidence 4667789999999999999999 77888999999952 110 0123444332111 1245999
Q ss_pred cccCCCCCeEEEEEEEcCCeeE-----EEEeeEEEeCCCCC--------CCceecCCCceEeccCCcEEEEEEEeccCCC
Q psy2775 77 KSIKKREEGVYTVVAKNREGEA-----KMDIPVKVNTGKPE--------KPSILEPLHDVSITEGESAVLSVQVGGEPSP 143 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~~~-----~~~~~v~v~~~~~~--------~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~ 143 (785)
.+++.+|+|.|+|.|.|..+.. .....|.|....+. .+.+...+....+.+|+.+.|.|.+.+.|.+
T Consensus 78 ~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~ 157 (238)
T 2p1y_A 78 ELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFD 157 (238)
T ss_dssp SSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCC
T ss_pred ecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCC
Confidence 9999999999999999875421 12345666531110 0155556677889999999999999998889
Q ss_pred eEEEeECC--EE---cc----------cceEE----EeCCEEEEEEcccCCCCcEEEEEEEEcCC
Q psy2775 144 KVEWYKDG--KL---IK----------DRQIT----SEKNTHTLTLIQCSTKDKGRYSVKVTNKE 189 (785)
Q Consensus 144 ~v~W~~~g--~~---~~----------~~~~~----~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 189 (785)
.+.|+|++ .. +. ...+. ......+|.|.+++.+|+|.|+|.|.|..
T Consensus 158 ~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 158 YFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred cEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 99999963 11 10 11111 12345789999999999999999999873
No 237
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=1.5e-18 Score=171.90 Aligned_cols=178 Identities=15% Similarity=0.133 Sum_probs=123.0
Q ss_pred CCeEEecCCcEEEEEEEeCC---CceEEEEEC--CEEcc----------------cCCCEEEEEe--CcEEEEEEccCCC
Q psy2775 423 QDVKVSRDEKASFEIELTKG---DALVKWYKD--GKEIA----------------FSENVTLSID--GKKQKLIIFSAGL 479 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~--~~~~~----------------~~~~~~~~~~--~~~~~L~i~~~~~ 479 (785)
....+.+|++++|.|.+.+. .+.+.|+|+ +..+. ...++.+..+ +....|+|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 34578899999999999873 578999985 22110 1346666654 4567899999999
Q ss_pred CCcEEEEEEEeec-C------cc---eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccc
Q psy2775 480 EDAGEYSCRVGDT-G------DK---ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPT 549 (785)
Q Consensus 480 ~d~G~Y~C~a~n~-g------~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 549 (785)
+|+|.|+|.|.|. | .. ...+.|.|..++... ......
T Consensus 88 ~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~--~~~~~~------------------------------- 134 (257)
T 1f3r_B 88 DDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGS--GGGGSG------------------------------- 134 (257)
T ss_dssp TCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSS--CCSSSC-------------------------------
T ss_pred ccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccc--cccccC-------------------------------
Confidence 9999999999996 3 11 134567776543100 000000
Q ss_pred cCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEe--CCEEec------------CCCCeeEEeeCCeEE
Q psy2775 550 CPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFR--NNKPLL------------SSPKKREIFDGENII 615 (785)
Q Consensus 550 ~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~--~~~~i~------------~~~~~~~~~~~~~~~ 615 (785)
....++.+...+....+.+|++++|.|.+.|.|.|.+.|+| +|..+. ...++.....+..++
T Consensus 135 ----~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 210 (257)
T 1f3r_B 135 ----GGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYT 210 (257)
T ss_dssp ----CCCCEECSCEETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEE
T ss_pred ----CCccceEEEccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEE
Confidence 00001333444456778999999999999999999999999 554331 123444444566778
Q ss_pred EEEccCCCCCCceeEEEEEEcCC
Q psy2775 616 LELKEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 616 L~i~~~~~~~d~G~Y~C~a~n~~ 638 (785)
|+|.++.. +|+|.|+|.|.|..
T Consensus 211 L~I~~v~~-~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 211 LTISSLQP-EDVATYFCYQYNNG 232 (257)
T ss_dssp EEECSCCG-GGCSEEEEEEESSS
T ss_pred EEECCCCh-hhCEEEEEEEeCCC
Confidence 99999999 99999999999975
No 238
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.78 E-value=2e-18 Score=162.45 Aligned_cols=159 Identities=16% Similarity=0.216 Sum_probs=111.3
Q ss_pred cCCCeEEecCCcEEEEEEEeC--CCceEEEEECCEEcc---cC---------------CCEEEEEeCcEEEEEEccCCCC
Q psy2775 421 PLQDVKVSRDEKASFEIELTK--GDALVKWYKDGKEIA---FS---------------ENVTLSIDGKKQKLIIFSAGLE 480 (785)
Q Consensus 421 ~~~~~~v~~g~~~~l~C~~~~--~~~~i~W~~~~~~~~---~~---------------~~~~~~~~~~~~~L~i~~~~~~ 480 (785)
.+..+.+.+|++++|.|.+.+ +.+.|.|++++..+. .. ++..+. ....|+|.+++.+
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~ 80 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKME 80 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGG
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcc
Confidence 455677889999999999875 346899999986542 10 133332 1347999999999
Q ss_pred CcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCC
Q psy2775 481 DAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAP 559 (785)
Q Consensus 481 d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p 559 (785)
|+|.|+|.|.|. +.....+.|.|..++.. |
T Consensus 81 D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~-------------------------------------------------p 111 (193)
T 2if7_A 81 DTGSYRAQISTKTSAKLSSYTLRILRQLRN-------------------------------------------------I 111 (193)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECCCEE-------------------------------------------------E
T ss_pred cCceEEEEEEecCCCeEEEEEEEEEccCCC-------------------------------------------------C
Confidence 999999999997 65566778888765310 2
Q ss_pred eEeeeeeeeeeeecC-eEEEEEEEecC-CCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 560 LFIERFEEKTVKEKG-TIRLMAKVKAS-PAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~-~v~l~C~~~g~-P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
.+.... ..+..|. .++|.|.+.|. |.|.|+|+|+|..+..+ . .|.|......+|+|.|+|.|.|.
T Consensus 112 ~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~---------~--~l~i~~~~~~~d~G~Y~C~a~N~ 178 (193)
T 2if7_A 112 QVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQ---------P--NLTVSWDPRISSEQDYTCIAENA 178 (193)
T ss_dssp EEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESS---------S--EEEEEECTTTCSCCEEEEEEEET
T ss_pred eEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCC---------C--eEEEEeccCcCCCCcEEEEEECC
Confidence 222111 1233465 89999999996 57899999999876432 1 36665444413899999999999
Q ss_pred CcceEEE
Q psy2775 638 LGSATHG 644 (785)
Q Consensus 638 ~g~~~~~ 644 (785)
.|..+..
T Consensus 179 ~g~~s~~ 185 (193)
T 2if7_A 179 VSNLSFS 185 (193)
T ss_dssp TEEEEEE
T ss_pred CCccccc
Confidence 9987543
No 239
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.78 E-value=1.5e-19 Score=171.54 Aligned_cols=174 Identities=20% Similarity=0.230 Sum_probs=105.4
Q ss_pred ecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecCcceeEEEEEEEcCc
Q psy2775 428 SRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTGDKESKATLTVEAPA 507 (785)
Q Consensus 428 ~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g~~~~~~~l~V~~~~ 507 (785)
.+|++++|.|.+ +.+.|.|+|+|..+... ......|.|.+++.+|+|.|+|.+.+..+. ...|.|....
T Consensus 16 ~~G~~v~L~C~~--p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~--~~~v~v~~~~ 84 (204)
T 1sy6_A 16 QEDGSVLLTCDA--EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNKSK--PLQVYYRMGS 84 (204)
T ss_dssp CSSSEEEEEECS--CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSCCC--CEEEEEEC--
T ss_pred cCCCeEEEEEcC--CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCCCe--eEEEEEEEec
Confidence 579999999998 78899999999987532 112347999999999999999998664322 2444444110
Q ss_pred ccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeee-ecCeEEEEEEEecCC
Q psy2775 508 VEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVK-EKGTIRLMAKVKASP 586 (785)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~-~g~~v~l~C~~~g~P 586 (785)
..... ...... ... ..+... ..+. .....++.+... ...+. +|++++|.|. |.|
T Consensus 85 ~~~~~--~~~~~~---~~~------~~~~~~----~~~~------~~~~~~~~~~~~--p~~v~~~G~~v~L~C~--g~p 139 (204)
T 1sy6_A 85 ADDAK--KDAAKK---DDA------KKDDAK----KDGS------DGNEEMGGITQT--PYKVSISGTTVILTCP--QYP 139 (204)
T ss_dssp -------------------------------------------------------CC--CCEEEEETTEEEEECS--CCC
T ss_pred ccccc--cccccc---ccc------cccccc----cccc------cccccccceecC--CceeeecCCcEEEEcC--CCC
Confidence 00000 000000 000 000000 0000 000001222111 12334 8999999999 899
Q ss_pred CCceEEEeCCEEecCCCC-eeEEeeCCeEEEEEccC-CCCCCceeEEEEEEcCCcc
Q psy2775 587 APSIVWFRNNKPLLSSPK-KREIFDGENIILELKEA-DSETDAGDYKVVATNELGS 640 (785)
Q Consensus 587 ~p~v~W~~~~~~i~~~~~-~~~~~~~~~~~L~i~~~-~~~~d~G~Y~C~a~n~~g~ 640 (785)
.|.|+|+|+|..+....+ ..+... ..+|.|.++ .. +|+|.|+|.|.|..|.
T Consensus 140 ~p~i~W~k~~~~l~~~~~~~~~~~~--~~~L~I~~v~~~-~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 140 GSEILWQHNDKNIGGDEDDKNIGSD--EDHLSLKEFSEL-EQSGYYVCYPRGSKPE 192 (204)
T ss_dssp SSCEEEEETTEEESCCTTCTTEEEE--TTEEEETTCCHH-HHCEEEEEEETTSCGG
T ss_pred CCceEEEECCEECCCccCCceEecC--CCEEEEeeCCcc-ccCEEEEEEeccCCCC
Confidence 999999999999865422 222222 456999999 88 9999999999999996
No 240
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.78 E-value=1.4e-19 Score=173.80 Aligned_cols=173 Identities=18% Similarity=0.214 Sum_probs=122.0
Q ss_pred CCCeEEecCCcEEEEEEEeC-CCceEEEEEC--CEEcc------------cCCCEEEEEeCcEEEEEEccCCCCCcEEEE
Q psy2775 422 LQDVKVSRDEKASFEIELTK-GDALVKWYKD--GKEIA------------FSENVTLSIDGKKQKLIIFSAGLEDAGEYS 486 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~--~~~~~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 486 (785)
+....+.+|++++|.|.+.+ +.+.+.|+|+ +..+. ...++.+...+....|.|.+++.+|+|.|+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 55678899999999999876 4567999985 33221 135677666677789999999999999999
Q ss_pred EEEeec-Ccc---eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEe
Q psy2775 487 CRVGDT-GDK---ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFI 562 (785)
Q Consensus 487 C~a~n~-g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~ 562 (785)
|.|.|. +.. .....|.|...+. .+|.+.
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~~------------------------------------------------~~p~v~ 117 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGPK------------------------------------------------SSPKVT 117 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCCC------------------------------------------------BCCEEE
T ss_pred EEEEcccCcccccCCceEEEEccCCC------------------------------------------------CCCEEE
Confidence 999973 211 2335566653210 013333
Q ss_pred eeeeeeeeeecCeEEEEEEEecC-CC-CceEEEeCCEEecCCCCeeE-EeeCC----eEEEEEccCCCCCCceeEEEEEE
Q psy2775 563 ERFEEKTVKEKGTIRLMAKVKAS-PA-PSIVWFRNNKPLLSSPKKRE-IFDGE----NIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 563 ~~~~~~~v~~g~~v~l~C~~~g~-P~-p~v~W~~~~~~i~~~~~~~~-~~~~~----~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
.......+.+|+.++|.|.+.|. |+ |.|+|+|+|..+..+..... ..+++ .++|.|.++.. +|+|.|+|.|.
T Consensus 118 ~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C~a~ 196 (212)
T 1nfd_E 118 VFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQW-KSHNRVSCQVT 196 (212)
T ss_dssp CCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHH-HTCSCEEEEEE
T ss_pred eeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhc-CCCCeEEEEEE
Confidence 32223345689999999999998 55 79999999999865432111 11111 24599999998 99999999999
Q ss_pred cCCcceEE
Q psy2775 636 NELGSATH 643 (785)
Q Consensus 636 n~~g~~~~ 643 (785)
|..+....
T Consensus 197 n~~~~~~~ 204 (212)
T 1nfd_E 197 HEGETVEK 204 (212)
T ss_dssp CTTTTCCC
T ss_pred eCCceEEE
Confidence 99876443
No 241
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.78 E-value=2.2e-18 Score=166.37 Aligned_cols=176 Identities=14% Similarity=0.170 Sum_probs=118.9
Q ss_pred CCCeEEecCCcEEEEEEEeC-C--CceEEEEEC--CEEcc-----------------cCCCEEEEEe--CcEEEEEEccC
Q psy2775 422 LQDVKVSRDEKASFEIELTK-G--DALVKWYKD--GKEIA-----------------FSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~--~~~~~-----------------~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
+....+.+|++++|.|.+.+ + .+.+.|+|+ +..+. ...++.+..+ .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 34567889999999999997 3 578999996 33221 1345665543 34578999999
Q ss_pred CCCCcEEEEEEEeecC-c----ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCC
Q psy2775 478 GLEDAGEYSCRVGDTG-D----KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPL 552 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~g-~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 552 (785)
+.+|+|.|+|.|.|.. . ....+.|.|...+.
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~-------------------------------------------- 122 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKT-------------------------------------------- 122 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCC--------------------------------------------
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEecCCC--------------------------------------------
Confidence 9999999999999963 1 12346677765310
Q ss_pred CCCCCCCeEeeeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecCCCCeeEEeeC---CeEEEEEccCCCCCCc
Q psy2775 553 GSPGQAPLFIERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLSSPKKREIFDG---ENIILELKEADSETDA 627 (785)
Q Consensus 553 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~~~~~~~~~~~---~~~~L~i~~~~~~~d~ 627 (785)
.+|.+........+.+|+.++|.|.+.| +|.| .|+|+|+|..+...........+ ..+.|.|... . .|.
T Consensus 123 ----~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~-~-~d~ 196 (219)
T 1c1e_H 123 ----TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-P-RPS 196 (219)
T ss_dssp ----BCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESS-S-TTT
T ss_pred ----CCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEecc-c-CCC
Confidence 0133333222335678999999999999 8999 99999999864211111111111 1246888444 4 466
Q ss_pred eeEEEEEEcCCcceEEEEEE
Q psy2775 628 GDYKVVATNELGSATHGARV 647 (785)
Q Consensus 628 G~Y~C~a~n~~g~~~~~~~l 647 (785)
|.|+|.|.|..|......+|
T Consensus 197 g~Y~C~a~n~~~~~~~~~~i 216 (219)
T 1c1e_H 197 ETVTCNVAHPASSTKVDKKI 216 (219)
T ss_dssp SCCEEEEEEGGGTEEEEEEC
T ss_pred CEEEEEEEeCCCCccEEEec
Confidence 99999999999877655544
No 242
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.78 E-value=1.1e-19 Score=174.72 Aligned_cols=172 Identities=17% Similarity=0.210 Sum_probs=123.0
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EEcc------------CCCCEEEeecCCccceEEEEEEcccC
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EPLQ------------ETDEVVFSDQSDMHSYVSIVTIKSIK 80 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~~~------------~~~~~~~~~~~~~~~~~~~L~i~~~~ 80 (785)
+.. |..+.+.+|++++|.|.+.+.|.+.|.|++++ ..+. ...++.+.... ....|+|.+++
T Consensus 3 v~q-p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~ 77 (212)
T 1nfd_E 3 LIQ-PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSG----TTATLTISGAQ 77 (212)
T ss_dssp EEC-CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEET----TEEEEEETTCC
T ss_pred eEC-CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeC----CEEEEEECcCC
Confidence 455 88899999999999999988777889999853 2220 12344443322 12469999999
Q ss_pred CCCCeEEEEEEEcC-CeeE--EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC-CeEEEeECCEEcc
Q psy2775 81 KREEGVYTVVAKNR-EGEA--KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS-PKVEWYKDGKLIK 155 (785)
Q Consensus 81 ~~D~G~Y~C~a~~~-~~~~--~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~-~~v~W~~~g~~~~ 155 (785)
.+|+|.|+|.|.|. .+.. .....|.|......+|.+........+.+|+.+.|.|.+.|. |+ +.|+|++||..+.
T Consensus 78 ~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~ 157 (212)
T 1nfd_E 78 PEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATIN 157 (212)
T ss_dssp GGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEEC
T ss_pred cccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcC
Confidence 99999999999962 2221 223456665433456777665544556689999999999886 54 7999999999886
Q ss_pred cceEE----E-eC---CEEEEEEcccCCCCcEEEEEEEEcCCee
Q psy2775 156 DRQIT----S-EK---NTHTLTLIQCSTKDKGRYSVKVTNKEGT 191 (785)
Q Consensus 156 ~~~~~----~-~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 191 (785)
..... . .+ ..+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 158 DGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp SSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred CCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 54210 0 11 1245889999999999999999998754
No 243
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.78 E-value=1.4e-18 Score=167.39 Aligned_cols=171 Identities=16% Similarity=0.175 Sum_probs=118.6
Q ss_pred eeecCCceEecCCCeEEEEEEE-EecC-CCeeEEEECCE--Ec------------cCCCCEEEeecCCccceEEEEEEcc
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRL-VAVP-EPDLLWYYNGE--PL------------QETDEVVFSDQSDMHSYVSIVTIKS 78 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~-~g~p-~~~i~W~~~~~--~~------------~~~~~~~~~~~~~~~~~~~~L~i~~ 78 (785)
|.. |..+.+.+|++++|.|.+ .+.+ .+.|.|++++. .+ ....++.+...+ ..++|+|.+
T Consensus 4 v~q-p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~ 78 (216)
T 2xzc_L 4 LTQ-PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSG----TSATLGITG 78 (216)
T ss_dssp BBC-CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET----TEEEEEECS
T ss_pred EEC-CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccC----CEEEEEECC
Confidence 444 778999999999999995 4432 57899999542 11 012344433211 235699999
Q ss_pred cCCCCCeEEEEEEEcCCe--eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCC-eEEEeECCEEc
Q psy2775 79 IKKREEGVYTVVAKNREG--EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVEWYKDGKLI 154 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~~--~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~W~~~g~~~ 154 (785)
++.+|+|.|+|.|.|..+ .......|.|.. ...+|.+...........|+.+.|.|.+.| .|++ .|+|++||..+
T Consensus 79 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~ 157 (216)
T 2xzc_L 79 LQTGDEADYYCGTWDSSLNPVFGGGTKLEIKR-TVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQ 157 (216)
T ss_dssp CCGGGCEEEEEEEECTTSCEEEBCCEEEEECC-CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred CCcccCEEEEEEEEeCCCcceECCCEEEEEcC-CCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeec
Confidence 999999999999999876 222334566642 234676665333333446899999999988 4554 89999999988
Q ss_pred ccc-eEE----E-eCC----EEEEEEcccCCCCcEEEEEEEEcCCee
Q psy2775 155 KDR-QIT----S-EKN----THTLTLIQCSTKDKGRYSVKVTNKEGT 191 (785)
Q Consensus 155 ~~~-~~~----~-~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 191 (785)
... ... . .++ .+.|.|..+..+|+|.|+|.|.|....
T Consensus 158 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 204 (216)
T 2xzc_L 158 SGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 204 (216)
T ss_dssp CSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred CCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCC
Confidence 665 111 1 111 237999999999999999999998754
No 244
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.78 E-value=6.5e-18 Score=167.36 Aligned_cols=185 Identities=11% Similarity=0.202 Sum_probs=127.7
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---c--------------cCCCCEEEeecCCccceEEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---L--------------QETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~--------------~~~~~~~~~~~~~~~~~~~~L~i 76 (785)
.+..+.+.+|++|+|.|.+.+.+ .+.+.||+.. .. + ....++.+..+... ...+|+|
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~~L~I 85 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSS--STAYLEL 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGG--TEEEEEE
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCC--CEEEEEE
Confidence 34557799999999999998866 6789999842 11 1 01234444332211 2356999
Q ss_pred cccCCCCCeEEEEEEEcC----CeeEEEEeeEEEeCC------------CCCCCceecCCCceEeccCCcEEEEEEEecc
Q psy2775 77 KSIKKREEGVYTVVAKNR----EGEAKMDIPVKVNTG------------KPEKPSILEPLHDVSITEGESAVLSVQVGGE 140 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~----~~~~~~~~~v~v~~~------------~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~ 140 (785)
.+++.+|+|.|.|.+.+. .+.......|.|... .+.+|.+...+....+.+|+.++|.|.+.+.
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 165 (256)
T 3umt_A 86 RSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQD 165 (256)
T ss_dssp CSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSC
T ss_pred CCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecC
Confidence 999999999999999987 333334456777531 1126677777778899999999999999988
Q ss_pred CCCeEEEeEC--CEEcc-------------cc--eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEE-EEEEEEeec
Q psy2775 141 PSPKVEWYKD--GKLIK-------------DR--QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE-SAANLNVDP 202 (785)
Q Consensus 141 p~~~v~W~~~--g~~~~-------------~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~ 202 (785)
+.+.+.|+|+ +..+. .. .........+|+|.+++.+|+|.|.|.|.+...... ..+.|.|..
T Consensus 166 ~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~ 245 (256)
T 3umt_A 166 IGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKR 245 (256)
T ss_dssp CTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEEC
Confidence 8889999983 22211 01 122344567899999999999999999998654333 247788875
Q ss_pred CC
Q psy2775 203 YE 204 (785)
Q Consensus 203 ~~ 204 (785)
.+
T Consensus 246 ~~ 247 (256)
T 3umt_A 246 AA 247 (256)
T ss_dssp --
T ss_pred CC
Confidence 43
No 245
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.78 E-value=1.3e-17 Score=165.42 Aligned_cols=191 Identities=12% Similarity=0.136 Sum_probs=129.4
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEec--CCCeeEEEECC--E---Ec-------------cCCCCEEEeecCCccce
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNG--E---PL-------------QETDEVVFSDQSDMHSY 70 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~--~---~~-------------~~~~~~~~~~~~~~~~~ 70 (785)
.++.....|..+.+.+|++|+|.|.+.+. +.+.+.|++.. . .+ ....++.+..+... .
T Consensus 7 ~~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~ 84 (257)
T 3gkz_A 7 DKEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSK--N 84 (257)
T ss_dssp --CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGG--T
T ss_pred CccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCC--c
Confidence 34445667788889999999999999884 46899999842 1 11 01234444332211 2
Q ss_pred EEEEEEcccCCCCCeEEEEEEEcC----CeeEEEEeeEEEeCCC----------CCCCceecCCCceEeccCCcEEEEEE
Q psy2775 71 VSIVTIKSIKKREEGVYTVVAKNR----EGEAKMDIPVKVNTGK----------PEKPSILEPLHDVSITEGESAVLSVQ 136 (785)
Q Consensus 71 ~~~L~i~~~~~~D~G~Y~C~a~~~----~~~~~~~~~v~v~~~~----------~~~p~i~~~~~~~~~~~G~~v~l~C~ 136 (785)
..+|+|.+++.+|+|.|+|.|.|. .........|.|.... ..+|.+...+....+.+|+.++|.|.
T Consensus 85 ~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~ 164 (257)
T 3gkz_A 85 QVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCS 164 (257)
T ss_dssp EEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEE
T ss_pred eEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEE
Confidence 356999999999999999999986 2222334556665320 13466777777789999999999999
Q ss_pred EeccCCC-eEEEeEC--CEEccc-------------c--eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEE-EEE
Q psy2775 137 VGGEPSP-KVEWYKD--GKLIKD-------------R--QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVES-AAN 197 (785)
Q Consensus 137 ~~g~p~~-~v~W~~~--g~~~~~-------------~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~ 197 (785)
+.+.+.+ .+.|+|. +..+.. . .........+|.|.+++.+|+|.|.|.|.+.....-. ...
T Consensus 165 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~ 244 (257)
T 3gkz_A 165 ASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFPFTFGSGTK 244 (257)
T ss_dssp ESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEE
T ss_pred EccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCceEEcCCEE
Confidence 9888777 9999983 332210 1 1123345678999999999999999999875433222 366
Q ss_pred EEeecC
Q psy2775 198 LNVDPY 203 (785)
Q Consensus 198 l~V~~~ 203 (785)
|.|...
T Consensus 245 l~v~~~ 250 (257)
T 3gkz_A 245 LEIKRA 250 (257)
T ss_dssp EEECCC
T ss_pred EEEEeC
Confidence 777643
No 246
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.78 E-value=7.9e-18 Score=166.74 Aligned_cols=189 Identities=12% Similarity=0.114 Sum_probs=131.1
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeC---CCceEEEEECC--EEc-----------------ccCCCEEEEEe--CcE
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTK---GDALVKWYKDG--KEI-----------------AFSENVTLSID--GKK 469 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~~~-----------------~~~~~~~~~~~--~~~ 469 (785)
.++.+...+..+.+.+|++++|.|.+.+ +.+.+.|++.. ..+ ....++.+..+ +..
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 3566667788899999999999999988 46679999732 111 11246666644 346
Q ss_pred EEEEEccCCCCCcEEEEEEEeec-------------CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCc
Q psy2775 470 QKLIIFSAGLEDAGEYSCRVGDT-------------GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPD 536 (785)
Q Consensus 470 ~~L~i~~~~~~d~G~Y~C~a~n~-------------g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (785)
..|+|.+++.+|+|.|.|.|.|. +.......|.|..++...... +
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~-~--------------------- 142 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGG-G--------------------- 142 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC-----------------------------
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCccccccc-c---------------------
Confidence 78999999999999999999984 112334667776542110000 0
Q ss_pred eeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCC-CceEEEeC--CEEec------------C
Q psy2775 537 IQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPA-PSIVWFRN--NKPLL------------S 601 (785)
Q Consensus 537 ~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~-p~v~W~~~--~~~i~------------~ 601 (785)
......+|.+...+....+.+|++++|.|.+.+.|. +.+.|||. +..+. .
T Consensus 143 ---------------~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~ 207 (256)
T 3juy_B 143 ---------------SGGGGSEIVLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGI 207 (256)
T ss_dssp ------------------CCCCCCEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTC
T ss_pred ---------------cCCCcceeEEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCcc
Confidence 000011356666677889999999999999999887 89999983 22211 2
Q ss_pred CCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcc
Q psy2775 602 SPKKREIFDGENIILELKEADSETDAGDYKVVATNELGS 640 (785)
Q Consensus 602 ~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~ 640 (785)
..++.....+...+|+|.+++. +|+|.|.|.|.|..+.
T Consensus 208 ~~r~~~~~~~~~~~L~I~~v~~-~DsG~Y~C~~~~~~~~ 245 (256)
T 3juy_B 208 SDRFSGSGSGTDFTLTITRVEP-EDFALYYCQVYGASSY 245 (256)
T ss_dssp CTTEEEEEETTEEEEEESSCCG-GGCSEEEEEECCSSCC
T ss_pred CCcEEEEccCCEEEEEECCCCH-hHCEEEEEEEeeCCCc
Confidence 3455555666778899999999 9999999999996543
No 247
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=5.3e-18 Score=170.44 Aligned_cols=185 Identities=13% Similarity=0.237 Sum_probs=129.3
Q ss_pred eeecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEcc-----------------CCCCEEEeecCCccceEEE
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPLQ-----------------ETDEVVFSDQSDMHSYVSI 73 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~ 73 (785)
+...|..+.+.+|++|+|.|.+.+.+ .+.+.|++++ ..+. ...++.+..+... ...+
T Consensus 29 ~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~s 106 (282)
T 1qok_A 29 KLQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSS--NTAY 106 (282)
T ss_dssp EEEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTT--TEEE
T ss_pred EEECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCC--CeEE
Confidence 45678899999999999999998875 5789999964 1110 1234444332111 2256
Q ss_pred EEEcccCCCCCeEEEEEEEcCCe---eE--EEEeeEEEeCCC-----------CCCCceecCCCceEeccCCcEEEEEEE
Q psy2775 74 VTIKSIKKREEGVYTVVAKNREG---EA--KMDIPVKVNTGK-----------PEKPSILEPLHDVSITEGESAVLSVQV 137 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~~---~~--~~~~~v~v~~~~-----------~~~p~i~~~~~~~~~~~G~~v~l~C~~ 137 (785)
|+|.+++.+|+|.|.|.+.|..+ .. .....|.|...+ ..++.+...+....+.+|+.++|.|.+
T Consensus 107 L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~ 186 (282)
T 1qok_A 107 LQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSA 186 (282)
T ss_dssp EEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEE
T ss_pred EEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEe
Confidence 99999999999999999999865 11 123456665422 124556666677889999999999999
Q ss_pred eccCCCeEEEeE--CCEEcc-------------cc--eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCee-EEEEEEEE
Q psy2775 138 GGEPSPKVEWYK--DGKLIK-------------DR--QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGT-VESAANLN 199 (785)
Q Consensus 138 ~g~p~~~v~W~~--~g~~~~-------------~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~ 199 (785)
.+.+ +.+.|+| +|..+. .. .........+|+|.+++.+|+|.|.|.|.+.... ....+.|.
T Consensus 187 ~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~ 265 (282)
T 1qok_A 187 SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLE 265 (282)
T ss_dssp SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEE
T ss_pred cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEE
Confidence 9888 8999999 665441 11 1122345678999999999999999999875432 23346777
Q ss_pred eec
Q psy2775 200 VDP 202 (785)
Q Consensus 200 V~~ 202 (785)
|..
T Consensus 266 V~~ 268 (282)
T 1qok_A 266 LKR 268 (282)
T ss_dssp EC-
T ss_pred Eec
Confidence 763
No 248
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.78 E-value=6.3e-19 Score=172.27 Aligned_cols=177 Identities=17% Similarity=0.150 Sum_probs=123.3
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCC-C-eeEEEECCE--Ec------------cCCCCEEEeecCCccceEEEEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPE-P-DLLWYYNGE--PL------------QETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~-~-~i~W~~~~~--~~------------~~~~~~~~~~~~~~~~~~~~L~ 75 (785)
.+.+.. |..+.+.+|++++|.|.+.+.+. + .+.|++++. .+ ....++...... ...+|+
T Consensus 20 ~~~v~~-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~ 94 (234)
T 2j6e_L 20 QSVLTQ-PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSG----TSASLA 94 (234)
T ss_dssp CCCCBC-CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEET----TEEEEE
T ss_pred ccEEeC-CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecC----CeEEEE
Confidence 455555 88899999999999999987543 4 799998632 11 012344333211 124699
Q ss_pred EcccCCCCCeEEEEEEEcCCe---eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccC-C-CeEEEeEC
Q psy2775 76 IKSIKKREEGVYTVVAKNREG---EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEP-S-PKVEWYKD 150 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~---~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p-~-~~v~W~~~ 150 (785)
|.+++.+|+|.|+|.|.+..+ .......|.|......+|.+...........|+.+.|.|.+.|.+ + +.|+|++|
T Consensus 95 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~ 174 (234)
T 2j6e_L 95 ISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKAD 174 (234)
T ss_dssp EESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEET
T ss_pred ECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEEC
Confidence 999999999999999999876 222344566643333456665433333345688999999998854 3 38999999
Q ss_pred CEEcccceEE-----Ee----CCEEEEEEcccCCCCcEEEEEEEEcCCeeEE
Q psy2775 151 GKLIKDRQIT-----SE----KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVE 193 (785)
Q Consensus 151 g~~~~~~~~~-----~~----~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 193 (785)
|..+...... .. ...+.|.|.++..+|+|.|+|.|.|..+..+
T Consensus 175 g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 226 (234)
T 2j6e_L 175 GAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVE 226 (234)
T ss_dssp TEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCC
T ss_pred CEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceE
Confidence 9988654211 01 1235799999999999999999999876543
No 249
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.77 E-value=3.8e-18 Score=167.11 Aligned_cols=180 Identities=17% Similarity=0.183 Sum_probs=126.7
Q ss_pred cccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECC--E------------EcccCCCEEEEEeCcEEEEEEccCCCCC
Q psy2775 417 EISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDG--K------------EIAFSENVTLSIDGKKQKLIIFSAGLED 481 (785)
Q Consensus 417 ~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~--~------------~~~~~~~~~~~~~~~~~~L~i~~~~~~d 481 (785)
.+...+....+.+|++++|.|.+.+ +.+.+.|+|.+ . ......++.....+....|.|.+++.+|
T Consensus 26 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 105 (237)
T 3sob_L 26 QMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPED 105 (237)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhh
Confidence 3444556778999999999999988 47789999832 1 1112356776666677899999999999
Q ss_pred cEEEEEEEeec-C-cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCC
Q psy2775 482 AGEYSCRVGDT-G-DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAP 559 (785)
Q Consensus 482 ~G~Y~C~a~n~-g-~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p 559 (785)
+|.|+|.|.|. + .......|.|..... +|
T Consensus 106 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~-------------------------------------------------~p 136 (237)
T 3sob_L 106 FATYYCQQSYTTPPTFGQGTKVEIKRTVA-------------------------------------------------AP 136 (237)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEECCCB-------------------------------------------------CC
T ss_pred CeEEEEeeccCCceEEcCcEEEEEecCCC-------------------------------------------------CC
Confidence 99999999986 3 223445677755211 14
Q ss_pred eEeeeeeeeeeeecCeEEEEEEEecC-C-CCceEEEeCCEEecCCC-C-eeEEe-eCC----eEEEEEccCCCCCCceeE
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAKVKAS-P-APSIVWFRNNKPLLSSP-K-KREIF-DGE----NIILELKEADSETDAGDY 630 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~~~g~-P-~p~v~W~~~~~~i~~~~-~-~~~~~-~~~----~~~L~i~~~~~~~d~G~Y 630 (785)
.+........+.+|+.++|.|.+.|. | .|.|+|+|+|..+..+. . ..... .++ ..+|.|..... +|+|.|
T Consensus 137 ~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y 215 (237)
T 3sob_L 137 SVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADY-EKHKVY 215 (237)
T ss_dssp EEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHH-TTCCEE
T ss_pred ceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHc-cCCCcE
Confidence 44433334455679999999999985 5 57999999999886532 1 01111 111 35688999888 899999
Q ss_pred EEEEEcCCcceEEEEE
Q psy2775 631 KVVATNELGSATHGAR 646 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~~ 646 (785)
+|.|.|.......+.+
T Consensus 216 ~C~a~n~~~~~~~~~~ 231 (237)
T 3sob_L 216 ACEVTHQGLSSPVTKS 231 (237)
T ss_dssp EEEEECTTCSSCEEEE
T ss_pred EEEEeeCCCCCceeee
Confidence 9999999875544333
No 250
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.77 E-value=2.1e-18 Score=165.78 Aligned_cols=176 Identities=14% Similarity=0.194 Sum_probs=124.2
Q ss_pred cccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECC---EE--c---------ccCCCEEEEEeCcEEEEEEccCCCCC
Q psy2775 417 EISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDG---KE--I---------AFSENVTLSIDGKKQKLIIFSAGLED 481 (785)
Q Consensus 417 ~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~---~~--~---------~~~~~~~~~~~~~~~~L~i~~~~~~d 481 (785)
.+..++..+.+.+|++++|.|.+.+ +.+.+.|+|.+ .. + ....++.+...+....|+|.+++.+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3r06_A 3 QMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESED 82 (213)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCccc
Confidence 3444566778999999999999998 57889999832 11 0 12456666666677899999999999
Q ss_pred cEEEEEEEeec-C-cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCC
Q psy2775 482 AGEYSCRVGDT-G-DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAP 559 (785)
Q Consensus 482 ~G~Y~C~a~n~-g-~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p 559 (785)
+|.|+|.|.|. + .......|.|..... +|
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~-------------------------------------------------~p 113 (213)
T 3r06_A 83 IGSYYCQQYYNYPWTFGPGTKLEIKRADA-------------------------------------------------KP 113 (213)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEECCCCB-------------------------------------------------CC
T ss_pred CEEEEEecccCCceEEcCCceEEEeccCC-------------------------------------------------Cc
Confidence 99999999986 3 233446677733211 14
Q ss_pred eEeeeeeeeeeeecCeEEEEEEEecCCCC--ceEEEeCCEEecCCC-Ce-eEEe-eCC----eEEEEEccCCCCCCceeE
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAKVKASPAP--SIVWFRNNKPLLSSP-KK-REIF-DGE----NIILELKEADSETDAGDY 630 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~~~g~P~p--~v~W~~~~~~i~~~~-~~-~~~~-~~~----~~~L~i~~~~~~~d~G~Y 630 (785)
.+........+..|+.++|.|.+.|.|++ .|.|+|+|..+..+. .. .... .++ .++|.|..... +|+|.|
T Consensus 114 ~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~-~d~g~Y 192 (213)
T 3r06_A 114 TVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADY-ERHNLY 192 (213)
T ss_dssp EEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHH-HTCCEE
T ss_pred eeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHh-ccCCeE
Confidence 44444445556678899999999987643 899999999986542 11 1111 111 24688888877 899999
Q ss_pred EEEEEcCCcceE
Q psy2775 631 KVVATNELGSAT 642 (785)
Q Consensus 631 ~C~a~n~~g~~~ 642 (785)
+|.|.|......
T Consensus 193 tC~v~n~~~~~~ 204 (213)
T 3r06_A 193 TCEVTHKTSTAA 204 (213)
T ss_dssp EEEEEETTCSSC
T ss_pred EEEEEecccCcc
Confidence 999999875443
No 251
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.77 E-value=7.5e-18 Score=159.97 Aligned_cols=165 Identities=13% Similarity=0.135 Sum_probs=120.0
Q ss_pred CCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceE----EEeCCEEEEEEcccCCCCcEEEEEEEE
Q psy2775 111 PEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQI----TSEKNTHTLTLIQCSTKDKGRYSVKVT 186 (785)
Q Consensus 111 ~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~----~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 186 (785)
..+|.|...+. ..+.+|+.++|.|.+. .+.+.+.|+|+|..+..... ........|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSD-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEES-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEecc-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 35677766554 6788999999999997 46779999999976643221 112235689999999999999999998
Q ss_pred cCCe-----eEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEcc
Q psy2775 187 NKEG-----TVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG 261 (785)
Q Consensus 187 n~~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g 261 (785)
+... ..+..+.|.|.... .+|.+...+. ..+.+|+.++|.|.+.+
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~~-----------------------------~~p~i~~~p~-~~v~~G~~v~L~C~~~~ 133 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGLY-----------------------------EKPSLSAQPG-PTVLAGENVTLSCSSRS 133 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECSS-----------------------------CCCEEEEESC-SEECTTCEEEEEEEESS
T ss_pred cCCCCccccCCCCCEEEEeeccC-----------------------------CCCceecCCC-CccCCCCeEEEEEeCCC
Confidence 7531 22344667776432 3466665554 46889999999999976
Q ss_pred CCCCeEEEEECCEEcccce--EEEeC--CEEEEEEccCCCCCCeEEEEEEEeC
Q psy2775 262 EPSPKVEWYKDGKLIKDRQ--ITSEK--NTHTLTLIQCSTKDKGRYSVKVTNK 310 (785)
Q Consensus 262 ~p~~~v~W~~~~~~l~~~~--~~~~~--~~~~l~i~~~~~~d~G~Y~C~~~n~ 310 (785)
+.+.+.|+|+|..+.... ..... ....|.|.+++ |+|.|+|.|.+.
T Consensus 134 -~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 134 -SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp -CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred -CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 567999999998765221 11122 25689999998 999999999876
No 252
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.77 E-value=2e-18 Score=165.39 Aligned_cols=174 Identities=11% Similarity=0.181 Sum_probs=120.9
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEcc----------------CCCCEEEeecCCccceEEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPLQ----------------ETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~L~i 76 (785)
..|..+.+.+|++++|.|.+.+.+ .+.+.|+|++ .... ...++.+..+... ...+|+|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~~L~I 82 (210)
T 3d9a_H 5 QESGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSK--NQYYLDL 82 (210)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGG--TEEEEEE
T ss_pred ecCCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCC--CEEEEEE
Confidence 346778999999999999998875 3789999853 2110 1234444432211 1246999
Q ss_pred cccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEeECCEEc
Q psy2775 77 KSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYKDGKLI 154 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~~~g~~~ 154 (785)
.+++.+|+|.|+|.+.+.. .......|.|....+.+|.+........+..|+.+.|.|.+.|. |.+ .|.|+++|..+
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~ 161 (210)
T 3d9a_H 83 NSVTTEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSS 161 (210)
T ss_dssp CSCCGGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred CCCCcccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCccc
Confidence 9999999999999999863 11123456665444456766544333456789999999999886 877 99999998764
Q ss_pred ccc---eEEEeC---CEEEEEEcccCCCCcEEEEEEEEcCCeeEEE
Q psy2775 155 KDR---QITSEK---NTHTLTLIQCSTKDKGRYSVKVTNKEGTVES 194 (785)
Q Consensus 155 ~~~---~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 194 (785)
... .....+ ....|.|.+...+| |.|+|.|.|..|....
T Consensus 162 ~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~ 206 (210)
T 3d9a_H 162 GVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKV 206 (210)
T ss_dssp TEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEE
T ss_pred ceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccc
Confidence 311 111111 13568999988877 9999999999886543
No 253
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.77 E-value=4.8e-18 Score=166.66 Aligned_cols=171 Identities=15% Similarity=0.162 Sum_probs=121.2
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecC----CCeeEEEECC--EE---cc---------CCCCEEEeecCCccceEEEE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVP----EPDLLWYYNG--EP---LQ---------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p----~~~i~W~~~~--~~---~~---------~~~~~~~~~~~~~~~~~~~L 74 (785)
..|...|..+.+.+|++|+|.|.+.+.| .+.|.|++++ .. +. ...++.+...+ ...+|
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L 77 (240)
T 1moe_A 2 IVLTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSR----TDFTL 77 (240)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEE
T ss_pred CceEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecC----CeEEE
Confidence 3567788999999999999999999887 7889999953 11 10 12344443322 12469
Q ss_pred EEcccCCCCCeEEEEEEEcCCee-EEEEeeEEEeCCCC--CCCceecCCCceEeccCCcEEEEEEEeccC--CCeEEEeE
Q psy2775 75 TIKSIKKREEGVYTVVAKNREGE-AKMDIPVKVNTGKP--EKPSILEPLHDVSITEGESAVLSVQVGGEP--SPKVEWYK 149 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~~~-~~~~~~v~v~~~~~--~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p--~~~v~W~~ 149 (785)
+|.+++.+|+|.|+|.|.|..+. ......|.|..... .++.+...+....+.+|+.++|.|.+.+.| .+.+.|+|
T Consensus 78 ~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k 157 (240)
T 1moe_A 78 IIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVK 157 (240)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEE
T ss_pred EEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEE
Confidence 99999999999999999987553 22345666654221 223344455677899999999999999876 35999999
Q ss_pred C--CEEcc------------------cceEEE----eCCEEEEEEcccCCCCcEEEEEEEEc
Q psy2775 150 D--GKLIK------------------DRQITS----EKNTHTLTLIQCSTKDKGRYSVKVTN 187 (785)
Q Consensus 150 ~--g~~~~------------------~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n 187 (785)
+ |..+. ...+.. .....+|.|.+++.+|+|.|+|.|.+
T Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 158 QRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp ECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred ECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 5 32221 011111 13457899999999999999999984
No 254
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.77 E-value=4.9e-18 Score=161.52 Aligned_cols=169 Identities=16% Similarity=0.207 Sum_probs=115.8
Q ss_pred CeEEecCCcEEEEEEEeC-----CCceEEEEECCEEccc------------CCCEEEEEeCcEEEEEEccCCCCCcEEEE
Q psy2775 424 DVKVSRDEKASFEIELTK-----GDALVKWYKDGKEIAF------------SENVTLSIDGKKQKLIIFSAGLEDAGEYS 486 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~-----~~~~i~W~~~~~~~~~------------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 486 (785)
.+.+.+|++++|.|.+.. +.+.+.|++++..+.. ..+..+.. .....|.|.+++.+|+|.|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~-~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDI-TNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEES-TTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEcc-CCCcEEEEecccchhCeEEE
Confidence 456889999999999963 4567999999987621 12333211 22347999999999999999
Q ss_pred EEEeec-Ccc-----eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCe
Q psy2775 487 CRVGDT-GDK-----ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPL 560 (785)
Q Consensus 487 C~a~n~-g~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~ 560 (785)
|.|.|. |.. ...+.|.|..++. . |.
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~~-----~--------------------------------------------p~ 112 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADFP-----T--------------------------------------------PS 112 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCCC-----C--------------------------------------------CE
T ss_pred EEEEcCCCCccccccccEEEEEEcCCCC-----C--------------------------------------------Cc
Confidence 999996 443 2456666665421 1 22
Q ss_pred EeeeeeeeeeeecCeEEEEEEEe-cCCCCceEEEeCCEEecCCCCeeEEeeC-CeEE-EEEccCCCCCCceeEEEEEEcC
Q psy2775 561 FIERFEEKTVKEKGTIRLMAKVK-ASPAPSIVWFRNNKPLLSSPKKREIFDG-ENII-LELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 561 ~~~~~~~~~v~~g~~v~l~C~~~-g~P~p~v~W~~~~~~i~~~~~~~~~~~~-~~~~-L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
+.. .....|+.++|.|.+. |+|.|.|+|+|+|..+............ +... ..+..+.. +|+|.|+|.|.|.
T Consensus 113 ~~~----~~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~-~d~g~Y~C~a~n~ 187 (201)
T 1dr9_A 113 ISD----FEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNM-TTNHSFMCLIKYG 187 (201)
T ss_dssp EEE----EECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEET-TSCEEEEEEEEET
T ss_pred eEe----ccCCCCCeEEEEEecCCccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEe-cCCCEEEEEEecC
Confidence 211 1124588999999994 9999999999999988754322222212 2222 23345556 8999999999999
Q ss_pred CcceEEEEEE
Q psy2775 638 LGSATHGARV 647 (785)
Q Consensus 638 ~g~~~~~~~l 647 (785)
.|.....+++
T Consensus 188 ~~~~s~~~~~ 197 (201)
T 1dr9_A 188 HLRVNQTFNW 197 (201)
T ss_dssp TCCEEEEEEE
T ss_pred cceeeeEEec
Confidence 9988776553
No 255
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.77 E-value=1e-18 Score=166.70 Aligned_cols=179 Identities=12% Similarity=0.166 Sum_probs=119.9
Q ss_pred CCeeeecCCceE-ecCCCeEEEEEEEEecC----CCeeEEEECCEEccCCCCE-EEeecCCccceEEEEEEcccCCCCCe
Q psy2775 12 PPTFSKKTKPVY-AEENSEVTLEVRLVAVP----EPDLLWYYNGEPLQETDEV-VFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 12 ~p~~~~~~~~~~-v~~G~~v~l~C~~~g~p----~~~i~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
|..+...|.... +.+|++++|.|.+.|.+ .+.|.|++++..+...... .....++.....+.|+|.+++.+|+|
T Consensus 2 p~v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 81 (207)
T 2vol_A 2 SSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTC
T ss_pred CcEEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCC
Confidence 455566777666 89999999999998874 2489999999776432110 00112222233467999999999999
Q ss_pred EEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC-CeEEEeECCEEcccceE----
Q psy2775 86 VYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS-PKVEWYKDGKLIKDRQI---- 159 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~-~~v~W~~~g~~~~~~~~---- 159 (785)
.|+|.|.|..+.......+.+......+|.+...+.......|+.+.|.|.+.|. |+ +.|+|++||..+.....
T Consensus 82 ~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 161 (207)
T 2vol_A 82 EFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPI 161 (207)
T ss_dssp CEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCE
T ss_pred EEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCce
Confidence 9999999987743222222221123356776544333333469999999999885 44 38999999998764321
Q ss_pred EEeCC----EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 160 TSEKN----THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 160 ~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
...++ ...|.|.....+|.|.|+|.|.|...
T Consensus 162 ~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 162 MDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp ECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred ECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 11222 23466776667789999999999863
No 256
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.77 E-value=1.7e-18 Score=170.78 Aligned_cols=180 Identities=14% Similarity=0.152 Sum_probs=118.8
Q ss_pred eecCCceEecCCCeEEEEEEEEecCCCe-----eEEEECCEEccCC--------CCEEEeecCC------ccceEEEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVPEPD-----LLWYYNGEPLQET--------DEVVFSDQSD------MHSYVSIVTI 76 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p~~~-----i~W~~~~~~~~~~--------~~~~~~~~~~------~~~~~~~L~i 76 (785)
...|..+.+.+|++++|.|.+.|.|.+. |.|++++...... .......... ......+|+|
T Consensus 7 v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 86 (248)
T 3pv7_A 7 MMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRL 86 (248)
T ss_dssp CSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEE
T ss_pred EeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEe
Confidence 3567788999999999999999887765 9999974322100 0000000000 0011245999
Q ss_pred cccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCC-eEEEeECCEEc
Q psy2775 77 KSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVEWYKDGKLI 154 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~W~~~g~~~ 154 (785)
.+++.+|+|.|+|.+.+..+.....+.|.|. .+|.+...+. .....|+.+.|.|.+.| .|.+ .|+|+++|..+
T Consensus 87 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~----~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l 161 (248)
T 3pv7_A 87 PGIQLEEAGEYRCEVVVTPLKAQGTVQLEVV----ASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKF 161 (248)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEE----BCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSS
T ss_pred CCCCHHHCeEEEEEEEeCCccceeEEEEEEe----cCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccC
Confidence 9999999999999999998888888888887 3666665443 33456788889999988 7888 99999999654
Q ss_pred ccc----------eEEE-eCC----EEEEEEcccCCCCcEEEEEEEEcCCee--EEEEEEEEe
Q psy2775 155 KDR----------QITS-EKN----THTLTLIQCSTKDKGRYSVKVTNKEGT--VESAANLNV 200 (785)
Q Consensus 155 ~~~----------~~~~-~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V 200 (785)
... .... ..+ ...|.|.....+|.|.|+|.|.|..+. ....+.|.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 162 PHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred CCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 321 1111 111 356888899999999999999999876 444555555
No 257
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.77 E-value=3.9e-19 Score=172.17 Aligned_cols=176 Identities=17% Similarity=0.256 Sum_probs=120.9
Q ss_pred CeEEecCCcEEEEEEEeCCC------ceEEEEECCEEc-------------ccCCCEEEEEe---CcEEEEEEccCCCCC
Q psy2775 424 DVKVSRDEKASFEIELTKGD------ALVKWYKDGKEI-------------AFSENVTLSID---GKKQKLIIFSAGLED 481 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~~~------~~i~W~~~~~~~-------------~~~~~~~~~~~---~~~~~L~i~~~~~~d 481 (785)
.+.+.+|++++|.|.+.+.+ +.+.|++++... ....+..+..+ .....|.|.+++.+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 45577999999999988732 679999986432 11223222211 013579999999999
Q ss_pred cEEEEEEEeecCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeE
Q psy2775 482 AGEYSCRVGDTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLF 561 (785)
Q Consensus 482 ~G~Y~C~a~n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~ 561 (785)
+|.|+|.+.|.+.....+.|.|..++. +|.+
T Consensus 84 ~G~Y~C~~~~~~~~~~~~~l~V~~~~~-------------------------------------------------~p~i 114 (222)
T 4i0k_A 84 EGSYTCFVSIQDFDSAAVSLQVAAPYS-------------------------------------------------KPSM 114 (222)
T ss_dssp CSCEEEEEEECCCCCCCCCCCCCBCCC-------------------------------------------------CCEE
T ss_pred CEEEEEEEEeCCCceEEEEEEEEcCCC-------------------------------------------------CCcE
Confidence 999999999875555555666654321 1333
Q ss_pred eeeeeeeeeeecCeEEEEEEE-ecCCCCceEEEe-CCEEecCCCCeeEEee--CCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 562 IERFEEKTVKEKGTIRLMAKV-KASPAPSIVWFR-NNKPLLSSPKKREIFD--GENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 562 ~~~~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~-~~~~i~~~~~~~~~~~--~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
.... ...+.+|+.++|.|.+ .|+|.|.+.|++ ++..+........... +....|.|.++.. +|+|.|+|.|.|.
T Consensus 115 ~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~-~d~G~Y~C~a~n~ 192 (222)
T 4i0k_A 115 TLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVL-GANGTYSCLVRNP 192 (222)
T ss_dssp ECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEEC-CTTCEEEEEEEET
T ss_pred EeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEe-CCCCEEEEEEECC
Confidence 2222 3367789999999999 899999999999 5555533222222222 2234688999999 9999999999999
Q ss_pred CcceEEEEEEEEE
Q psy2775 638 LGSATHGARVTVD 650 (785)
Q Consensus 638 ~g~~~~~~~l~V~ 650 (785)
.|....++.|.|.
T Consensus 193 ~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 193 VLQQDAHGSVTIT 205 (222)
T ss_dssp TTTEEEEEEEECC
T ss_pred CCCCceEEEEEEe
Confidence 9999998888886
No 258
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.77 E-value=7.3e-16 Score=177.12 Aligned_cols=424 Identities=15% Similarity=0.192 Sum_probs=241.2
Q ss_pred CCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCC-CCeEEEEEEEcCCeeEEEEeeE
Q psy2775 26 ENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKR-EEGVYTVVAKNREGEAKMDIPV 104 (785)
Q Consensus 26 ~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~-D~G~Y~C~a~~~~~~~~~~~~v 104 (785)
.+.++.|.|.+.|.|.+.+.|.++|..+..-.+ ..|.|..+... ..+.|+|.+.+..|...... +
T Consensus 90 ~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~-------------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~-v 155 (731)
T 2v5y_A 90 PPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNR-------------AELAISTFWPNFYQVIFEVITSGHQGYLAIDE-V 155 (731)
T ss_dssp CSEEEEEEEEETTCCCCSEEEEECCCCCSSCEE-------------EEEEECCCTTSCEEEEEEEEECSSCCEEEECC-B
T ss_pred CcceEEEEEecCCCCccceeEEEeCCcCCceeE-------------EEEEEeecCCCceEEEEEEEecCCceEEEEee-E
Confidence 345899999999999999999999976532111 23566655333 35888998877777654332 2
Q ss_pred EEeC-CCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEE-Ee--ECCEEcccceEEEe---CCEEEEEEcccCCCC
Q psy2775 105 KVNT-GKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVE-WY--KDGKLIKDRQITSE---KNTHTLTLIQCSTKD 177 (785)
Q Consensus 105 ~v~~-~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~-W~--~~g~~~~~~~~~~~---~~~~~L~i~~~~~~d 177 (785)
.+.. .-..+|.+. .+....+..|+.+.|.|.+.|.|.+.+. |+ +||..+........ ....+|.|.++...|
T Consensus 156 ~~~~~~~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d 234 (731)
T 2v5y_A 156 KVLGHPCTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRD 234 (731)
T ss_dssp EEESSCCSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTT
T ss_pred Eeeecccccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEccccccc
Confidence 2322 223566666 4567899999999999999999999988 88 68877654432211 224689999999999
Q ss_pred cEEEEEEEEcCCee-EEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEE
Q psy2775 178 KGRYSVKVTNKEGT-VESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLS 256 (785)
Q Consensus 178 ~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~ 256 (785)
.|.|+|.|.|..|. .+..+.|.|...+. + +.+|.+.. .....+.|.
T Consensus 235 ~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~------~--------------------~~~p~~~~-------~~~~~v~l~ 281 (731)
T 2v5y_A 235 AGKYRCMIRTEGGVGISNYAELVVKEPPV------P--------------------IAPPQLAS-------VGATYLWIQ 281 (731)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEECCCC------B--------------------SSCCEEEE-------ECSSCEEEE
T ss_pred CeEEEEEEECCCCCcceeeEEEEEecCCC------C--------------------CCCcceec-------cCCceEEEE
Confidence 99999999999997 66667888874431 0 12222221 134567888
Q ss_pred EEEcc---CCCC---eEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEE--eCCCceEEEEEEEEeccccc
Q psy2775 257 VQVGG---EPSP---KVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVT--NKEGTVESAANLNVDQGKAE 328 (785)
Q Consensus 257 C~~~g---~p~~---~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~--n~~g~~~~~~~l~v~~~~~~ 328 (785)
|.... ..+. .|.|...+... ..........+.|.++...+.+.|+|.|. |..|....+..+.+......
T Consensus 282 w~~~~~~g~~~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~ 358 (731)
T 2v5y_A 282 LNANSINGDGPIVAREVEYCTASGSW---NDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCAD 358 (731)
T ss_dssp CCCSSBSSCSCCCEEEEEEEESSSSC---EEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCC
T ss_pred eCCcccCCCCccEEEEEEEEECCCCc---eEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCC
Confidence 87532 1221 46666543211 11122233578999999999999999999 98887654433333321111
Q ss_pred eeeeccceeE--eeCccEEEEEEEcCC--------CCeEEEEECCEEcCCCCcE---EEEEcCcEEEEEEcCCCCCCceE
Q psy2775 329 FIKKLDDLEV--KERENAVLEVEVTSD--------KADVKWFKDGQEIKTSKKV---TIEKKGTIRKLLIRNISVHDEGE 395 (785)
Q Consensus 329 ~~~~~~~~~~--~~g~~~~l~C~~~~~--------~~~v~W~~~~~~l~~~~~~---~~~~~~~~~~l~i~~~~~~d~G~ 395 (785)
....+....+ .....+.|....... ...+.|...+... .... ..........+.|.++.......
T Consensus 359 p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 436 (731)
T 2v5y_A 359 PMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQ--EQVREEVSWDTENSHPQHTITNLSPYTNVS 436 (731)
T ss_dssp CSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSS--EEEEEEEECCSSCSSCEEEECSCCSSCEEE
T ss_pred CCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCC--CccceeEEEEecCCcceEEECCCCCCCEEE
Confidence 1111222222 223455565554211 1134443321000 0000 01111223348899999888888
Q ss_pred EEEEEeccceEEE---EEEEecCCccccc-C-CCeEEe-cCCcEEEEEEEeC---CCc---eEEEEECCEE---ccc-CC
Q psy2775 396 YTCSLPDQETSAE---LNVVELPPEISVP-L-QDVKVS-RDEKASFEIELTK---GDA---LVKWYKDGKE---IAF-SE 459 (785)
Q Consensus 396 Y~C~a~n~~~~~~---~~v~~~~~~~~~~-~-~~~~v~-~g~~~~l~C~~~~---~~~---~i~W~~~~~~---~~~-~~ 459 (785)
|+..|.|..+... +.+.. +...... + ..+... ....+.|...... +.. .|.|...+.. ... ..
T Consensus 437 ~~V~A~n~~G~s~S~~~~~~T-~~~~P~~p~~~~~~~~~~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~ 515 (731)
T 2v5y_A 437 VKLILMNPEGRKESQELIVQT-DEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQ 515 (731)
T ss_dssp EEEEEECSSCEEECCCEEEEC-CCCCCCCCCTTTCEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC---CCCCC
T ss_pred EEEEEEcCCCCCCCceEEEEc-cCCCCCCCCcceEEeeecCCeEEEEEcCCCCCCCCccceEEEEEECcCCCccccccCc
Confidence 8888888766532 11211 1111111 1 122222 2455665554321 111 2444432211 000 11
Q ss_pred CEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEE
Q psy2775 460 NVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVE 504 (785)
Q Consensus 460 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~ 504 (785)
.......+....++|.++.......|+..|.|. |....+ .+.+.
T Consensus 516 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s-~~~~~ 560 (731)
T 2v5y_A 516 SGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA-TNQFT 560 (731)
T ss_dssp EEEEEEETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE-EEEEE
T ss_pred ceEEeecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc-ccEEE
Confidence 222333444457889999988888888889887 433333 34443
No 259
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.77 E-value=6.1e-18 Score=169.49 Aligned_cols=188 Identities=15% Similarity=0.127 Sum_probs=126.2
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE-----Ecc---------CCCCEEEeecCCccceEEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE-----PLQ---------ETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~-----~~~---------~~~~~~~~~~~~~~~~~~~L~i 76 (785)
..+.|...|..+.+.+|++++|.|.+.+.|.+.|.|++++. .+. ...++.+...+ ...+|+|
T Consensus 11 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I 86 (276)
T 3auv_A 11 GDIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSG----TDFTLTI 86 (276)
T ss_dssp -CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TEEEEEE
T ss_pred cceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccC----CeEEEEE
Confidence 35678888999999999999999999988889999998642 111 12344443221 1246999
Q ss_pred cccCCCCCeEEEEEEEcCCee-EEEEeeEEEeCCCC----------CCCceecCCCceEeccCCcEEEEEEEeccC--CC
Q psy2775 77 KSIKKREEGVYTVVAKNREGE-AKMDIPVKVNTGKP----------EKPSILEPLHDVSITEGESAVLSVQVGGEP--SP 143 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~~-~~~~~~v~v~~~~~----------~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p--~~ 143 (785)
.+++.+|+|.|+|.|.|..+. ......|.|...+. .++.+...+....+.+|+.++|.|.+.+.+ .+
T Consensus 87 ~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~ 166 (276)
T 3auv_A 87 SSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDY 166 (276)
T ss_dssp SSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGS
T ss_pred ccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCC
Confidence 999999999999999987543 12223455543210 122233334578899999999999998876 47
Q ss_pred eEEEeECC--EEc---c---------------cceE--EE--eCCEEEEEEcccCCCCcEEEEEEEEcCC---ee--EEE
Q psy2775 144 KVEWYKDG--KLI---K---------------DRQI--TS--EKNTHTLTLIQCSTKDKGRYSVKVTNKE---GT--VES 194 (785)
Q Consensus 144 ~v~W~~~g--~~~---~---------------~~~~--~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~---g~--~~~ 194 (785)
.+.|+|++ ..+ . ...+ .. .....+|.|.+++.+|+|.|.|.|.|.. +. ...
T Consensus 167 ~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~~~~~~~~fg~ 246 (276)
T 3auv_A 167 WIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFFLPYAMDYWGQ 246 (276)
T ss_dssp EEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSSTTCSCCCBCC
T ss_pred EEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCcCCcCceEECC
Confidence 99999953 211 0 0111 11 1345689999999999999999999973 21 122
Q ss_pred EEEEEeec
Q psy2775 195 AANLNVDP 202 (785)
Q Consensus 195 ~~~l~V~~ 202 (785)
.+.|.|..
T Consensus 247 gt~l~V~~ 254 (276)
T 3auv_A 247 GTLVTVSS 254 (276)
T ss_dssp CEEEEEC-
T ss_pred CEEEEEcc
Confidence 36677753
No 260
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.77 E-value=7.9e-18 Score=166.41 Aligned_cols=193 Identities=14% Similarity=0.180 Sum_probs=130.3
Q ss_pred ccCCCeEEecCCcEEEEEEEeC-C--CceEEEEEC--CEEc-----------------ccCCCEEEEEeC--cEEEEEEc
Q psy2775 420 VPLQDVKVSRDEKASFEIELTK-G--DALVKWYKD--GKEI-----------------AFSENVTLSIDG--KKQKLIIF 475 (785)
Q Consensus 420 ~~~~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~--~~~~-----------------~~~~~~~~~~~~--~~~~L~i~ 475 (785)
..+....+.+|++++|.|.+.+ + .+.+.|+|. +..+ ....++.+..+. ....|+|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 85 (253)
T 3uzq_A 6 EQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLS 85 (253)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeC
Confidence 3456778899999999999987 2 568999982 2111 112466666543 36779999
Q ss_pred cCCCCCcEEEEEEEeec-Ccc-eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 476 SAGLEDAGEYSCRVGDT-GDK-ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~-g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
+++.+|+|.|+|.|.|. +.. .....|.|...+...... .. .
T Consensus 86 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~--~~-----------------------------------~ 128 (253)
T 3uzq_A 86 SLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGG--GS-----------------------------------G 128 (253)
T ss_dssp SCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC-----------------------------------------
T ss_pred CCCcccCEEEEEEEeeCCccEECCCcEEEEecCCcccccc--cc-----------------------------------C
Confidence 99999999999999985 332 345677776531100000 00 0
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCC----ceEEEeCC--EEec------------CCCCeeEEeeCCeEE
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAP----SIVWFRNN--KPLL------------SSPKKREIFDGENII 615 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p----~v~W~~~~--~~i~------------~~~~~~~~~~~~~~~ 615 (785)
....+|.+...+....+.+|++++|.|.+.|.|.+ .+.|||++ .... ...++.....+..++
T Consensus 129 ~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 208 (253)
T 3uzq_A 129 GGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFT 208 (253)
T ss_dssp -----CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE
T ss_pred CCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEE
Confidence 00012556666667889999999999999999887 99999942 2111 123444445566778
Q ss_pred EEEccCCCCCCceeEEEEEEcCCcceEEE-EEEEEE
Q psy2775 616 LELKEADSETDAGDYKVVATNELGSATHG-ARVTVD 650 (785)
Q Consensus 616 L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~ 650 (785)
|+|.+++. +|+|.|.|.|.|..+..... ..|.|.
T Consensus 209 L~I~~v~~-~DsG~Y~C~~~n~~~~~fg~gt~l~v~ 243 (253)
T 3uzq_A 209 LTINPVEA-DDVATYFCQRSNEVPWTFGGGTKLEIK 243 (253)
T ss_dssp EEESSCCG-GGCEEEEEEECSSSSCCBCCCEEEEEC
T ss_pred EEECCCCH-HHCEEEEEEEccCCCcEECCCEEEEEc
Confidence 99999999 99999999999976544332 445554
No 261
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.77 E-value=2.5e-18 Score=165.66 Aligned_cols=172 Identities=17% Similarity=0.191 Sum_probs=118.8
Q ss_pred CCCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EEc------------ccCCCEEEEEeCcEEEEEEccCCCCCcEE
Q psy2775 422 LQDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KEI------------AFSENVTLSIDGKKQKLIIFSAGLEDAGE 484 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 484 (785)
+....+.+|++++|.|.+.+ + .+.+.|+|++ ..+ ....++.+..++....|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 45678899999999999644 3 4689999953 221 11346666666777899999999999999
Q ss_pred EEEEEeec-C--cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeE
Q psy2775 485 YSCRVGDT-G--DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLF 561 (785)
Q Consensus 485 Y~C~a~n~-g--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~ 561 (785)
|+|.|.|. + .......|.|..... +|.+
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~~-------------------------------------------------~P~v 117 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTVA-------------------------------------------------APSV 117 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCCB-------------------------------------------------CCEE
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCCC-------------------------------------------------CCce
Confidence 99999997 3 122345677653210 1333
Q ss_pred eeeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecCCCCe--eEEe-eCC----eEEEEEccCCCCCCceeEEE
Q psy2775 562 IERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLSSPKK--REIF-DGE----NIILELKEADSETDAGDYKV 632 (785)
Q Consensus 562 ~~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~~~~~--~~~~-~~~----~~~L~i~~~~~~~d~G~Y~C 632 (785)
........+.+|+.++|.|.+.| .|+| .|+|+|+|..+..+... .... .++ .+.|.|..+.. +|+|.|+|
T Consensus 118 ~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~g~Y~C 196 (216)
T 2xzc_L 118 FIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADY-EKHKVYAC 196 (216)
T ss_dssp EEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHH-TTCCEEEE
T ss_pred EEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHh-CCCCcEEE
Confidence 33222222346899999999998 4665 89999999988654111 1111 112 23799999988 99999999
Q ss_pred EEEcCCcceEE
Q psy2775 633 VATNELGSATH 643 (785)
Q Consensus 633 ~a~n~~g~~~~ 643 (785)
.|.|.......
T Consensus 197 ~a~n~~~~~~~ 207 (216)
T 2xzc_L 197 EVTHQGLSSPV 207 (216)
T ss_dssp EEECTTCSSCE
T ss_pred EEEcCCCCCce
Confidence 99998865443
No 262
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.77 E-value=3.8e-18 Score=168.05 Aligned_cols=175 Identities=15% Similarity=0.233 Sum_probs=123.0
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEE----------------CCEEccCC---CCEEEeecCCccceEEE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYY----------------NGEPLQET---DEVVFSDQSDMHSYVSI 73 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~----------------~~~~~~~~---~~~~~~~~~~~~~~~~~ 73 (785)
+.+...|..+.+.+|++++|.|.+.+.+.+.|.|+| ++...... .++.+..+. ....+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~~~~~ 78 (246)
T 4dzb_B 2 AVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHAS---LTLST 78 (246)
T ss_dssp CCEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEE---TTEEE
T ss_pred CccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecC---CCEEE
Confidence 357778899999999999999999988889999998 22222111 344443321 12357
Q ss_pred EEEcccCCCCCeEEEEEEEcCCe----eEEEEeeEEEeCC--CCCCCcee-cCCCceEeccCCcEEEEEEEeccCCC--e
Q psy2775 74 VTIKSIKKREEGVYTVVAKNREG----EAKMDIPVKVNTG--KPEKPSIL-EPLHDVSITEGESAVLSVQVGGEPSP--K 144 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~~----~~~~~~~v~v~~~--~~~~p~i~-~~~~~~~~~~G~~v~l~C~~~g~p~~--~ 144 (785)
|+|.+++.+|+|.|+|.+.+..+ .......|.|... ...+|.+. ..+....+..|+.++|.|.+.|.|++ .
T Consensus 79 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~ 158 (246)
T 4dzb_B 79 LTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 158 (246)
T ss_dssp EEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred EEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceE
Confidence 99999999999999999987543 2223345666531 12345543 34445556779999999999886654 8
Q ss_pred EEEeECCEEcccceEEE----------eCCE----EEEEEcccCCCC-cEEEEEEEEcCCe
Q psy2775 145 VEWYKDGKLIKDRQITS----------EKNT----HTLTLIQCSTKD-KGRYSVKVTNKEG 190 (785)
Q Consensus 145 v~W~~~g~~~~~~~~~~----------~~~~----~~L~i~~~~~~d-~G~Y~C~a~n~~g 190 (785)
++|++||..+....... .++. ..|.|.....+| .|.|+|.|.|...
T Consensus 159 v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~ 219 (246)
T 4dzb_B 159 LSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 219 (246)
T ss_dssp EEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred EEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCC
Confidence 99999999987543221 1222 348888888888 9999999998754
No 263
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.77 E-value=2.5e-18 Score=169.87 Aligned_cols=176 Identities=15% Similarity=0.162 Sum_probs=124.0
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecC-----CCeeEEEECCE--Ec---c---------CCCCEEEeecCCccceE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVP-----EPDLLWYYNGE--PL---Q---------ETDEVVFSDQSDMHSYV 71 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-----~~~i~W~~~~~--~~---~---------~~~~~~~~~~~~~~~~~ 71 (785)
..+.+...|..+.+.+|++++|.|.+.+.+ .+.|.|++++. .+ . ...++.+...+ ..
T Consensus 33 ~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~ 108 (252)
T 3bkj_L 33 SDVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSG----TD 108 (252)
T ss_dssp -CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEET----TE
T ss_pred cccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccC----CE
Confidence 356777789999999999999999998887 58999999641 11 0 12344333211 12
Q ss_pred EEEEEcccCCCCCeEEEEEEEcCCeeEE-EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEe
Q psy2775 72 SIVTIKSIKKREEGVYTVVAKNREGEAK-MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWY 148 (785)
Q Consensus 72 ~~L~i~~~~~~D~G~Y~C~a~~~~~~~~-~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~ 148 (785)
.+|+|.+++.+|+|.|+|.|.+..+... ....|.|.. ...+|.+........+..|+.++|.|.+.|. |++ .|+|+
T Consensus 109 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~ 187 (252)
T 3bkj_L 109 FTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKR-ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWK 187 (252)
T ss_dssp EEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECC-CCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeC-CCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEE
Confidence 4699999999999999999998755322 224566642 2245666654433344579999999999884 443 79999
Q ss_pred ECCEEcccc-eEE-----EeCC----EEEEEEcccCCCCcEEEEEEEEcCCee
Q psy2775 149 KDGKLIKDR-QIT-----SEKN----THTLTLIQCSTKDKGRYSVKVTNKEGT 191 (785)
Q Consensus 149 ~~g~~~~~~-~~~-----~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 191 (785)
+||..+... ... ..++ ...|.|.++..+|+|.|+|.|.|....
T Consensus 188 k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 240 (252)
T 3bkj_L 188 IDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 240 (252)
T ss_dssp ETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCS
T ss_pred ECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCC
Confidence 999987654 111 1111 246999999999999999999997654
No 264
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.77 E-value=9.1e-19 Score=169.59 Aligned_cols=181 Identities=15% Similarity=0.262 Sum_probs=124.6
Q ss_pred CceEecCCCeEEEEEEEEecCC-----CeeEEEECCEEc-------------cCCCCEEEeecCCccceEEEEEEcccCC
Q psy2775 20 KPVYAEENSEVTLEVRLVAVPE-----PDLLWYYNGEPL-------------QETDEVVFSDQSDMHSYVSIVTIKSIKK 81 (785)
Q Consensus 20 ~~~~v~~G~~v~l~C~~~g~p~-----~~i~W~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 81 (785)
..+.+.+|++++|.|.+.+.|. +.+.|++++... ....+..+..+ .......+|.|.+++.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~sL~I~~v~~ 81 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPD-LLVQGNASLRLQRVRV 81 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTT-TGGGTBCCEEECSCCG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecc-cccCCeEEEEECCccc
Confidence 4678899999999999987754 689999987432 11222222211 1111124599999999
Q ss_pred CCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeE-CCEEcccceE
Q psy2775 82 REEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYK-DGKLIKDRQI 159 (785)
Q Consensus 82 ~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~-~g~~~~~~~~ 159 (785)
+|+|.|+|.+.+.. .....+.|.|.. .+..|.+...+ ...+.+|+.+.|.|.+ .+.|.+.+.|++ ++..+.....
T Consensus 82 ~D~G~Y~C~~~~~~-~~~~~~~l~V~~-~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~ 158 (222)
T 4i0k_A 82 TDEGSYTCFVSIQD-FDSAAVSLQVAA-PYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVT 158 (222)
T ss_dssp GGCSCEEEEEEECC-CCCCCCCCCCCB-CCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEE
T ss_pred ccCEEEEEEEEeCC-CceEEEEEEEEc-CCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcc
Confidence 99999999999753 334445555543 23345665543 3467789999999999 788999999999 5665544321
Q ss_pred ---E-Ee-CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEeecCC
Q psy2775 160 ---T-SE-KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVDPYE 204 (785)
Q Consensus 160 ---~-~~-~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 204 (785)
. .. +.-..|.|.++..+|+|.|+|.|.|..|.....+.|.|...+
T Consensus 159 ~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p 208 (222)
T 4i0k_A 159 TSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITGQP 208 (222)
T ss_dssp EEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC--
T ss_pred eeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeCCc
Confidence 1 11 122458899999999999999999999999999999997543
No 265
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.77 E-value=2.6e-18 Score=141.26 Aligned_cols=95 Identities=17% Similarity=0.320 Sum_probs=85.5
Q ss_pred CCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCC--CeeEEeeCCeEEEEEccCCCCCCceeEEE
Q psy2775 555 PGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSP--KKREIFDGENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 555 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~--~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C 632 (785)
++.||.|...+.+..+.+|++++|.|.+.|.|.|.|+|+|||.++..+. ++.+...++.++|.|.++.. +|+|.|+|
T Consensus 2 P~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C 80 (100)
T 3knb_A 2 PGIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQK-QDGGLYTL 80 (100)
T ss_dssp CCEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCG-GGCEEEEE
T ss_pred CCCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCc-cCCEEEEE
Confidence 3557999999999999999999999999999999999999999997654 45566677788999999999 99999999
Q ss_pred EEEcCCcceEEEEEEEEE
Q psy2775 633 VATNELGSATHGARVTVD 650 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V~ 650 (785)
.|+|..|..+.++.|.|+
T Consensus 81 ~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 81 SLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEECCCEEEEEEEEEEE
Confidence 999999999999999886
No 266
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.76 E-value=1.2e-17 Score=164.84 Aligned_cols=172 Identities=17% Similarity=0.162 Sum_probs=119.3
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE-----Ec---------cCCCCEEEeecCCccceEEEEEEc
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE-----PL---------QETDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~-----~~---------~~~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
...+...|..+.+.+|++++|.|.+.+.|.+.+.|++++. .+ ....++...... ...+|+|.
T Consensus 4 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~ 79 (250)
T 3esu_F 4 DIVLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSG----TDYSLTIS 79 (250)
T ss_dssp CCCEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET----TEEEEEES
T ss_pred ceeEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCC----CEEEEEEc
Confidence 4567778899999999999999999999999999999531 11 112344332222 12469999
Q ss_pred ccCCCCCeEEEEEEEcCCeeEE-EEeeEEEeCCC---------------CCCCceecCCCceEeccCCcEEEEEEEeccC
Q psy2775 78 SIKKREEGVYTVVAKNREGEAK-MDIPVKVNTGK---------------PEKPSILEPLHDVSITEGESAVLSVQVGGEP 141 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~~~~~-~~~~v~v~~~~---------------~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p 141 (785)
+++.+|+|.|.|.|.|..+... ....|.|.... ..++.+...+....+.+|+.+.|.|.+.+.+
T Consensus 80 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~ 159 (250)
T 3esu_F 80 NLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYA 159 (250)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTT
T ss_pred cCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCc
Confidence 9999999999999998765432 23345664310 0123333444667899999999999998766
Q ss_pred --CCeEEEeEC--CEEccc------------------ce--EE--EeCCEEEEEEcccCCCCcEEEEEEEEc
Q psy2775 142 --SPKVEWYKD--GKLIKD------------------RQ--IT--SEKNTHTLTLIQCSTKDKGRYSVKVTN 187 (785)
Q Consensus 142 --~~~v~W~~~--g~~~~~------------------~~--~~--~~~~~~~L~i~~~~~~d~G~Y~C~a~n 187 (785)
.+.+.|+|+ +..+.. .. .. ......+|.|.+++.+|+|.|.|.|.+
T Consensus 160 ~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 160 FSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp GGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred ccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 779999997 433211 01 11 113456899999999999999999997
No 267
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.76 E-value=3.9e-18 Score=167.09 Aligned_cols=179 Identities=17% Similarity=0.213 Sum_probs=118.5
Q ss_pred cccCCCeEEecCCcEEEEEEEeCCCceEEEEEC--CEEc---------------ccCCCEEEEE-eCcEEEEEEccCCCC
Q psy2775 419 SVPLQDVKVSRDEKASFEIELTKGDALVKWYKD--GKEI---------------AFSENVTLSI-DGKKQKLIIFSAGLE 480 (785)
Q Consensus 419 ~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~--~~~~---------------~~~~~~~~~~-~~~~~~L~i~~~~~~ 480 (785)
...+..+.+.+|++++|.|....+.+.+.|+|+ +..+ ....++.+.. ......|+|.+++.+
T Consensus 4 ~q~p~~~~v~~G~~v~L~C~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~ 83 (238)
T 2p1y_A 4 TQSPRNKVAVTGGKVTLSCNQTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPS 83 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGG
T ss_pred eECccceEEeCCCEEEEEeecCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcc
Confidence 345567789999999999994337789999995 2111 1123455443 233568999999999
Q ss_pred CcEEEEEEEeec-Ccc-----eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCC
Q psy2775 481 DAGEYSCRVGDT-GDK-----ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGS 554 (785)
Q Consensus 481 d~G~Y~C~a~n~-g~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 554 (785)
|+|.|+|.|.|. |.. .....|.|...+.... + |..
T Consensus 84 DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~-p-~~~------------------------------------- 124 (238)
T 2p1y_A 84 QTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAK-K-DAA------------------------------------- 124 (238)
T ss_dssp GCEEEEEEEEC------CEEECCCEEEEEECCCHHHH-H-HHH-------------------------------------
T ss_pred cCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCc-C-Ccc-------------------------------------
Confidence 999999999986 321 1235666665421000 0 000
Q ss_pred CCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCE-----Ee---------cCCCCeeEEe--eCCeEEEEE
Q psy2775 555 PGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNK-----PL---------LSSPKKREIF--DGENIILEL 618 (785)
Q Consensus 555 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~-----~i---------~~~~~~~~~~--~~~~~~L~i 618 (785)
...+.+...+....+.+|++++|.|.+.|.|.|.+.|+|++. .+ ....++.+.. .+...+|+|
T Consensus 125 -~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 203 (238)
T 2p1y_A 125 -KKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHI 203 (238)
T ss_dssp -HHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEE
T ss_pred -cceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEE
Confidence 000134444456789999999999999999999999999641 11 1123333332 334678999
Q ss_pred ccCCCCCCceeEEEEEEcCC
Q psy2775 619 KEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 619 ~~~~~~~d~G~Y~C~a~n~~ 638 (785)
.+++. +|+|.|+|.|.|..
T Consensus 204 ~~v~~-~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 204 ADSQP-GDSATYFCAAIDTN 222 (238)
T ss_dssp TTCCG-GGCEEEEEEEEETT
T ss_pred cCCCH-HHCEEEEEEEeeCC
Confidence 99999 99999999999984
No 268
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.76 E-value=1.6e-18 Score=173.40 Aligned_cols=194 Identities=16% Similarity=0.255 Sum_probs=123.1
Q ss_pred CceecCCCceEeccCCcEEEEEEEe---ccCCCeEEEeECCEEcccc-------------------eEEE----eCCEEE
Q psy2775 114 PSILEPLHDVSITEGESAVLSVQVG---GEPSPKVEWYKDGKLIKDR-------------------QITS----EKNTHT 167 (785)
Q Consensus 114 p~i~~~~~~~~~~~G~~v~l~C~~~---g~p~~~v~W~~~g~~~~~~-------------------~~~~----~~~~~~ 167 (785)
+.+...+..+.+.+|+.+.|.|.+. +.+.+.|.|++++...... .... .....+
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 4455566678899999999999997 6677789999965432111 1111 122367
Q ss_pred EEEcccCCCCcEEEEEEEEcCCeeE--EEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcc
Q psy2775 168 LTLIQCSTKDKGRYSVKVTNKEGTV--ESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDV 245 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 245 (785)
|.|.+++.+|+|.|+|.|.+..+.. ...+.|.|... .+...
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~-------------------------------------~p~~~ 128 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE-------------------------------------EPRDL 128 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC-------------------------------------CCSEE
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc-------------------------------------CCCcc
Confidence 9999999999999999999876543 34455555411 11245
Q ss_pred eeCCCCeEEEEEEE---ccCCCCeEEEEEC-CEEcccc----------------------eEEE----eCCEEEEEEccC
Q psy2775 246 SITEGESAVLSVQV---GGEPSPKVEWYKD-GKLIKDR----------------------QITS----EKNTHTLTLIQC 295 (785)
Q Consensus 246 ~~~~G~~~~l~C~~---~g~p~~~v~W~~~-~~~l~~~----------------------~~~~----~~~~~~l~i~~~ 295 (785)
.+.+|+.++|.|.+ .+.|.+.+.|+++ +..+... .... ......|.|.++
T Consensus 129 ~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v 208 (268)
T 3mj6_A 129 RVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTV 208 (268)
T ss_dssp EEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSC
T ss_pred ccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcC
Confidence 67799999999999 6779999999994 3211100 0111 123568999999
Q ss_pred CCCCCeEEEEEEEeCCCceEEEEEEEEeccccceeeeccceeEeeCccE
Q psy2775 296 STKDKGRYSVKVTNKEGTVESAANLNVDQGKAEFIKKLDDLEVKERENA 344 (785)
Q Consensus 296 ~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~ 344 (785)
..+|+|.|+|.|.|..|.....+.|.|...++.+...+....+..|+.+
T Consensus 209 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~p~~~~~p~~~~~~~~q~~ 257 (268)
T 3mj6_A 209 KESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTISPTPPTDKGQQGI 257 (268)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEECC-------------------
T ss_pred ChhhCeEEEEEEEcCCceEEEEEEEEEEcCCCeeeeCCCCCCCCcceec
Confidence 9999999999999999988888999997767777666666666665544
No 269
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.76 E-value=1.3e-17 Score=164.77 Aligned_cols=186 Identities=15% Similarity=0.156 Sum_probs=121.9
Q ss_pred cccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECC-----EE---------cccCCCEEEEEeCcEEEEEEccCCCCC
Q psy2775 417 EISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDG-----KE---------IAFSENVTLSIDGKKQKLIIFSAGLED 481 (785)
Q Consensus 417 ~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~-----~~---------~~~~~~~~~~~~~~~~~L~i~~~~~~d 481 (785)
.+...+..+.+.+|++++|.|.+.+ +.+.+.|+|+. .. .....++.....+....|+|.+++.+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 3444566778899999999999997 67789999853 11 112356666666777899999999999
Q ss_pred cEEEEEEEeec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCC
Q psy2775 482 AGEYSCRVGDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAP 559 (785)
Q Consensus 482 ~G~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p 559 (785)
+|.|+|.|.|. +. ......|.|..++..-. ..+ .... ......++
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~-~~~---~~~~-----------------------------~~~~~~~~ 132 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSG-GGG---SGGG-----------------------------GSGGGGSE 132 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC-------------------------------------------------------
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCccc-ccc---cccc-----------------------------cccCcccc
Confidence 99999999986 32 23445677765421000 000 0000 00000113
Q ss_pred eEeeeeeeeeeeecCeEEEEEEEecCC--CCceEEEeC--CEEec-----------------CCCCeeEEee--CCeEEE
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAKVKASP--APSIVWFRN--NKPLL-----------------SSPKKREIFD--GENIIL 616 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~--~~~i~-----------------~~~~~~~~~~--~~~~~L 616 (785)
.++..+....+.+|++++|.|.+.|.| .+.+.|+|+ +..+. ...++.+..+ +...+|
T Consensus 133 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 212 (250)
T 3esu_F 133 VQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYM 212 (250)
T ss_dssp --CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEE
T ss_pred eEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEE
Confidence 344444567799999999999999987 779999997 43221 0133433332 456689
Q ss_pred EEccCCCCCCceeEEEEEEc
Q psy2775 617 ELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 617 ~i~~~~~~~d~G~Y~C~a~n 636 (785)
+|.+++. +|+|.|.|.|.|
T Consensus 213 ~I~~v~~-~DsG~Y~C~~~~ 231 (250)
T 3esu_F 213 QLSSLTS-VDSAVYFCARSG 231 (250)
T ss_dssp EECSCCG-GGCEEEEEEEEC
T ss_pred EECCCCc-ccCEEEEEEEec
Confidence 9999999 999999999997
No 270
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=1.5e-17 Score=163.20 Aligned_cols=172 Identities=14% Similarity=0.207 Sum_probs=123.1
Q ss_pred ccccCCCeEEecCCcEEEEEEEeC-C----CceEEEEECC--EEc---c---------cCCCEEEEEeCcEEEEEEccCC
Q psy2775 418 ISVPLQDVKVSRDEKASFEIELTK-G----DALVKWYKDG--KEI---A---------FSENVTLSIDGKKQKLIIFSAG 478 (785)
Q Consensus 418 ~~~~~~~~~v~~g~~~~l~C~~~~-~----~~~i~W~~~~--~~~---~---------~~~~~~~~~~~~~~~L~i~~~~ 478 (785)
+...+....+.+|++++|.|.+.+ + .+.+.|+|++ ..+ . ...++.+...+....|+|.+++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 344556778999999999999988 4 5679999952 211 0 1346777666777899999999
Q ss_pred CCCcEEEEEEEeec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCC
Q psy2775 479 LEDAGEYSCRVGDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPG 556 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 556 (785)
.+|+|.|+|.|.|. +. ....+.|.|..++.. .
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~----------------------------------------------~ 117 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSG----------------------------------------------G 117 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSCC----------------------------------------------C
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCCC----------------------------------------------C
Confidence 99999999999996 43 345577887764310 0
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCC--CceEEEeC--CEEe------c-----------CCCCeeEEee--CCe
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPA--PSIVWFRN--NKPL------L-----------SSPKKREIFD--GEN 613 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~--p~v~W~~~--~~~i------~-----------~~~~~~~~~~--~~~ 613 (785)
.++.++..+....+.+|++++|.|.+.|.|. +.|.|+|+ +..+ . ...++....+ ...
T Consensus 118 ~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 197 (240)
T 1moe_A 118 GGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNT 197 (240)
T ss_dssp CCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTE
T ss_pred CceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCE
Confidence 0122333445667899999999999999974 59999996 2221 0 1123333332 456
Q ss_pred EEEEEccCCCCCCceeEEEEEEc
Q psy2775 614 IILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 614 ~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+|+|.+++. +|+|.|+|.|.+
T Consensus 198 ~~L~I~~v~~-~D~G~Y~C~a~~ 219 (240)
T 1moe_A 198 AYLQLTSLTS-EDTAVYYCAPFG 219 (240)
T ss_dssp EEEEECSCCG-GGCEEEEEEECS
T ss_pred EEEEECcCCH-HHCEEEEEEEEe
Confidence 7899999999 999999999995
No 271
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.76 E-value=3.1e-17 Score=158.48 Aligned_cols=177 Identities=11% Similarity=0.142 Sum_probs=121.3
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--E---Ecc--------------CCCCEEEeecCCccceEEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--E---PLQ--------------ETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~---~~~--------------~~~~~~~~~~~~~~~~~~~L~i 76 (785)
.|..+.+.+|++|+|.|.+.+.+ .+.+.|||+. . .+. ...|+.+..+... ....|+|
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~sL~I 83 (223)
T 1dee_B 6 ESGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSK--NTLYLQM 83 (223)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTT--TEEEEEE
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCC--CEEEEEE
Confidence 45688999999999999998765 4789999853 1 110 1234444432211 2356999
Q ss_pred cccCCCCCeEEEEEEEcCCe----e--EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEe
Q psy2775 77 KSIKKREEGVYTVVAKNREG----E--AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWY 148 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~----~--~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~ 148 (785)
.+++.+|+|.|.|.+.+..+ . ....+.|.|....+.+|.+........+..|+.+.|.|.+.|. |.+ .|+|+
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 163 (223)
T 1dee_B 84 NSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWK 163 (223)
T ss_dssp CSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEE
T ss_pred CCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeE
Confidence 99999999999999998752 1 1133467776434456666532222335789999999999886 766 99999
Q ss_pred E-CCEEcccce---EEEeCC----EEEEEEcccCC--CCcEEEEEEEEcCCeeEEEEE
Q psy2775 149 K-DGKLIKDRQ---ITSEKN----THTLTLIQCST--KDKGRYSVKVTNKEGTVESAA 196 (785)
Q Consensus 149 ~-~g~~~~~~~---~~~~~~----~~~L~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~ 196 (785)
+ ||..+.... .....+ .+.|.|..... +|.|.|+|.|.|..+......
T Consensus 164 ~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 164 YKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKDV 221 (223)
T ss_dssp ETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEEE
T ss_pred ccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcccc
Confidence 9 998875410 000112 34688877776 889999999999988665443
No 272
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.76 E-value=9.1e-18 Score=162.13 Aligned_cols=177 Identities=14% Similarity=0.196 Sum_probs=123.2
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---c---cC-------------CCCEEEeecCCccceEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---L---QE-------------TDEVVFSDQSDMHSYVSI 73 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~---~~-------------~~~~~~~~~~~~~~~~~~ 73 (785)
..|..+.+.+|++++|.|.+.+.+ .+.+.|++++ .. + .. ..++.+..+. .....+
T Consensus 5 ~~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~~ 82 (220)
T 1pz5_B 5 EESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDD--SKSSVY 82 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEG--GGTEEE
T ss_pred eccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeC--CCCeEE
Confidence 346788999999999999998866 6889999853 11 1 00 2344443322 112346
Q ss_pred EEEcccCCCCCeEEEEEEEcCCeeE-E--EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEe
Q psy2775 74 VTIKSIKKREEGVYTVVAKNREGEA-K--MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWY 148 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~~~~-~--~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~ 148 (785)
|+|.+++.+|+|.|.|.+.+..+.. . ....|.|....+.+|.+........+.+|+.+.|.|.+.|. |.+ .|.|+
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~ 162 (220)
T 1pz5_B 83 LQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWN 162 (220)
T ss_dssp EEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEG
T ss_pred EEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEe
Confidence 9999999999999999999875321 2 34567776544456766544434456789999999999887 888 99999
Q ss_pred ECCEEcc---cceEEEe---CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEE
Q psy2775 149 KDGKLIK---DRQITSE---KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAA 196 (785)
Q Consensus 149 ~~g~~~~---~~~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 196 (785)
+++.... ....... .....|.|.+...+| |.|+|.|.|..|..+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 215 (220)
T 1pz5_B 163 YGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLIK 215 (220)
T ss_dssp GGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeeee
Confidence 9886421 0001111 124578999888877 999999999998766544
No 273
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.76 E-value=5.7e-18 Score=164.11 Aligned_cols=182 Identities=13% Similarity=0.171 Sum_probs=119.9
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---c---c-----------CCCCEEEeecCCccceEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---L---Q-----------ETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~---~-----------~~~~~~~~~~~~~~~~~~~L~ 75 (785)
..|..+.+.+|++|+|.|.+.+.+ .+.+.|||++ .. + . ...++.+..+.. .....|+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~ 82 (227)
T 1mju_H 5 QQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTS--SSTAYMQ 82 (227)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETT--TTEEEEE
T ss_pred cCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCC--CCeEEEE
Confidence 456788999999999999998876 6789999864 21 1 0 023444433221 1235699
Q ss_pred EcccCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEeECCE
Q psy2775 76 IKSIKKREEGVYTVVAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYKDGK 152 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~~~g~ 152 (785)
|.+++.+|+|.|.|.+.+..... .....|.|....+.+|.+........+..|+.++|.|.+.|. |.+ .|.|+++|.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 162 (227)
T 1mju_H 83 LSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSL 162 (227)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCC
Confidence 99999999999999999864322 223467776433445666543333356789999999999885 766 999999987
Q ss_pred Ecccc---eEEEe---CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 153 LIKDR---QITSE---KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 153 ~~~~~---~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
.+... ..... ...+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 163 ~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 163 SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp CTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred cCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 65311 11111 123578999988888 99999999987665555555443
No 274
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.76 E-value=2.5e-17 Score=165.46 Aligned_cols=190 Identities=15% Similarity=0.228 Sum_probs=128.5
Q ss_pred CCCeEEecCCcEEEEEEEeCC---CceEEEEECC--EEc-----------------ccCCCEEEEEe--CcEEEEEEccC
Q psy2775 422 LQDVKVSRDEKASFEIELTKG---DALVKWYKDG--KEI-----------------AFSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
+....+.+|++++|.|.+.+. .+.+.|+|++ ..+ ....++.+..+ +....|+|.++
T Consensus 33 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 112 (282)
T 1qok_A 33 SGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSL 112 (282)
T ss_dssp CCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcC
Confidence 346778999999999999874 4789999953 111 01356666653 34678999999
Q ss_pred CCCCcEEEEEEEeec-Cc-----ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccC
Q psy2775 478 GLEDAGEYSCRVGDT-GD-----KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCP 551 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g~-----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 551 (785)
+.+|+|.|+|.|.|. |. ....+.|.|..++..... ...
T Consensus 113 ~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~--~~~---------------------------------- 156 (282)
T 1qok_A 113 TSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGG--GGS---------------------------------- 156 (282)
T ss_dssp CGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC----------------------------------------------
T ss_pred ChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCC--ccC----------------------------------
Confidence 999999999999997 41 113456777764310000 000
Q ss_pred CCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEe--CCEEec------------CCCCeeEEeeCCeEEEE
Q psy2775 552 LGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFR--NNKPLL------------SSPKKREIFDGENIILE 617 (785)
Q Consensus 552 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~--~~~~i~------------~~~~~~~~~~~~~~~L~ 617 (785)
.....++.+...+....+.+|++++|.|.+.|.| +.+.|+| +|..+. ...++.....+...+|+
T Consensus 157 -~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 234 (282)
T 1qok_A 157 -GGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLT 234 (282)
T ss_dssp ------CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred -CCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEE
Confidence 0000124555556677899999999999999999 9999999 555431 12445444456678899
Q ss_pred EccCCCCCCceeEEEEEEcCCcceE-EEEEEEEE
Q psy2775 618 LKEADSETDAGDYKVVATNELGSAT-HGARVTVD 650 (785)
Q Consensus 618 i~~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~ 650 (785)
|.++.. +|+|.|+|.|.|..+... ....|.|.
T Consensus 235 I~~v~~-~DsG~Y~C~a~~~~~~~fg~gt~l~V~ 267 (282)
T 1qok_A 235 ISRMEA-EDAATYYCQQRSSYPLTFGAGTKLELK 267 (282)
T ss_dssp ESSCCG-GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred EccCCh-hHCEEEEEEEeeCCCceEeCCEEEEEe
Confidence 999999 999999999998654332 23556664
No 275
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.76 E-value=2.8e-17 Score=152.99 Aligned_cols=153 Identities=16% Similarity=0.142 Sum_probs=113.7
Q ss_pred eEecCCCeEEEEEEEEecCCC--eeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEEcCCeeEE
Q psy2775 22 VYAEENSEVTLEVRLVAVPEP--DLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAKNREGEAK 99 (785)
Q Consensus 22 ~~v~~G~~v~l~C~~~g~p~~--~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~~ 99 (785)
+.|.+|++++|+|.+ +.|.+ .|+|++.+..+ .+.... .....|.|.+++.+|+|.|.|.|.|..+...
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~~~------~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~ 86 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQSD------TGRSVLTVRNASLSAAGTRVCVGSCGGRTFQ 86 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEEEE------SSEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEEec------CCccEEEECccCcccCceEEEEEEeCCCceE
Confidence 799999999999999 88887 99999866444 222222 1225699999999999999999999998888
Q ss_pred EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC----CeEEEeECCEEcccceE-E--E----------
Q psy2775 100 MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS----PKVEWYKDGKLIKDRQI-T--S---------- 161 (785)
Q Consensus 100 ~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~----~~v~W~~~g~~~~~~~~-~--~---------- 161 (785)
..+.|.|+. +|........ .+..|+.+ |+|.+.+. |. ++|+|+|||.+|..... . .
T Consensus 87 ~~~~ltV~~----~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~ 160 (210)
T 1gsm_A 87 HTVQLLVYA----FPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGD 160 (210)
T ss_dssp EEEEEEEEB----CCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSC
T ss_pred EEEEEEEEe----cCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCC
Confidence 888999983 4543321112 66778888 99999875 63 48999999999965432 1 1
Q ss_pred eCC----EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 162 EKN----THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 162 ~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
... .++|.+...+.+|.+.|+|+|.+...
T Consensus 161 ~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 161 EDVLFRVTERWRLPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp CCCCEEEEEEEECCCCCSSCCSEEEEEEEEEET
T ss_pred cceEEEEEEEEeecCCcccCCceEEEEEEeeCC
Confidence 011 23455557778888999999998763
No 276
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.76 E-value=2e-17 Score=165.73 Aligned_cols=184 Identities=15% Similarity=0.166 Sum_probs=124.2
Q ss_pred CcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCE-----Ecc---------cCCCEEEEEeCcEEEEEEccCCCC
Q psy2775 416 PEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGK-----EIA---------FSENVTLSIDGKKQKLIIFSAGLE 480 (785)
Q Consensus 416 ~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~-----~~~---------~~~~~~~~~~~~~~~L~i~~~~~~ 480 (785)
+.+...+..+.+.+|++++|.|.+.+ +.+.+.|++++. .+. ...++.+..++....|+|.+++.+
T Consensus 13 ~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 92 (276)
T 3auv_A 13 IQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 92 (276)
T ss_dssp CCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChh
Confidence 34445566778899999999999987 577899998542 111 134667666677789999999999
Q ss_pred CcEEEEEEEeec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCC
Q psy2775 481 DAGEYSCRVGDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQA 558 (785)
Q Consensus 481 d~G~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 558 (785)
|+|.|+|.|.|. +. ....+.|.|..++...... .. ....+
T Consensus 93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~---~~-----------------------------------~~~~p 134 (276)
T 3auv_A 93 DFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEG---RS-----------------------------------GGGGS 134 (276)
T ss_dssp GCEEEEEEECSSSSCCCCCCEEEEC-------------------------------------------------------
T ss_pred hCEEEEEEEecCCcccccCCEEEEEecCCCccccc---cc-----------------------------------cccCc
Confidence 999999999996 32 3334677776543100000 00 00001
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecCC--CCceEEEeCC--EEe-----------------cCCCCeeEEee--CCeEE
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKASP--APSIVWFRNN--KPL-----------------LSSPKKREIFD--GENII 615 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~~--~~i-----------------~~~~~~~~~~~--~~~~~ 615 (785)
+.++..+....+.+|++++|.|.+.|.| .+.|.|+|++ ... ....++.+..+ ....+
T Consensus 135 ~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 214 (276)
T 3auv_A 135 EVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAY 214 (276)
T ss_dssp CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEE
T ss_pred ceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEE
Confidence 2333444577899999999999999987 4799999963 211 01234444333 35568
Q ss_pred EEEccCCCCCCceeEEEEEEcCC
Q psy2775 616 LELKEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 616 L~i~~~~~~~d~G~Y~C~a~n~~ 638 (785)
|.|.+++. +|+|.|+|.|.|..
T Consensus 215 L~I~~v~~-~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 215 LQMNSLRA-EDTAVYYCARFVFF 236 (276)
T ss_dssp EEECSCCG-GGCEEEEEEEECSS
T ss_pred EEECCCCh-hHCEEEEEEEEcCc
Confidence 99999999 99999999999983
No 277
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.76 E-value=4.6e-18 Score=163.52 Aligned_cols=171 Identities=21% Similarity=0.216 Sum_probs=118.1
Q ss_pred cCCCeEEecCCcEEEEEEEeCC--------CceEEEEECCEEc------c-----------cCCCEEEEEe--CcEEEEE
Q psy2775 421 PLQDVKVSRDEKASFEIELTKG--------DALVKWYKDGKEI------A-----------FSENVTLSID--GKKQKLI 473 (785)
Q Consensus 421 ~~~~~~v~~g~~~~l~C~~~~~--------~~~i~W~~~~~~~------~-----------~~~~~~~~~~--~~~~~L~ 473 (785)
.+..+.+.+|++++|.|.+..+ .+.+.|+|++... . ...++.+..+ ....+|.
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~ 85 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLS 85 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEE
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEE
Confidence 3456788999999999999864 5679999986521 0 1234444322 1245799
Q ss_pred EccCCCCCcEEEEEEEeecC-cc----eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccccc
Q psy2775 474 IFSAGLEDAGEYSCRVGDTG-DK----ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVP 548 (785)
Q Consensus 474 i~~~~~~d~G~Y~C~a~n~g-~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 548 (785)
|.+++.+|+|.|+|.+.|.. .. ...+.|.|..++.
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~---------------------------------------- 125 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIE---------------------------------------- 125 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCC----------------------------------------
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCC----------------------------------------
Confidence 99999999999999999863 22 2357788876531
Q ss_pred ccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC----CCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCC
Q psy2775 549 TCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS----PAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSE 624 (785)
Q Consensus 549 ~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~----P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~ 624 (785)
+|.+.. ...+.+|+.++|.|.+.|. |.|.++|+|++..+... + ......|+|..+..
T Consensus 126 ---------~p~i~~---~~~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~-~-----~~~~~~L~i~~~~~- 186 (214)
T 2zg1_A 126 ---------KPDIHF---LEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDP-E-----TTRSSELTLTPRPE- 186 (214)
T ss_dssp ---------CCEEC-----CCCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCS-S-----CCCSSEEEECCCTT-
T ss_pred ---------CCceec---CccccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCC-C-----ceeEEEEEEecccH-
Confidence 133222 1136789999999999874 88999999998654321 1 13455799999988
Q ss_pred CCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 625 TDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 625 ~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+|+|.|+|.|.|..|....+..+.+.
T Consensus 187 ~~~g~Y~C~a~n~~~~~~~~~~v~l~ 212 (214)
T 2zg1_A 187 DHGTNLTCQMKRQGAQVTTERTVQLN 212 (214)
T ss_dssp CCSCEEEEEEECC----CCEEEEECC
T ss_pred HcCcEEEEEEEeCCCCcceEEEEEEE
Confidence 99999999999987665555555543
No 278
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.76 E-value=1.7e-17 Score=159.96 Aligned_cols=174 Identities=13% Similarity=0.176 Sum_probs=121.9
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--E---Ecc--------------CCCCEEEeecCCccceEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--E---PLQ--------------ETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~---~~~--------------~~~~~~~~~~~~~~~~~~~L~ 75 (785)
..|..+.+.+|++|+|.|.+.+.+ .+.+.||++. . .+. ...|+.+..+.. ....+|+
T Consensus 5 ~q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~ 82 (220)
T 2fbj_H 5 LESGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNA--KNSLYLQ 82 (220)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSS--SCEEEEE
T ss_pred ecCCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCC--CCEEEEE
Confidence 345679999999999999998765 5789999853 1 110 123454443311 1235699
Q ss_pred EcccCCCCCeEEEEEEEcCCee---EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC--CeEEEeE
Q psy2775 76 IKSIKKREEGVYTVVAKNREGE---AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS--PKVEWYK 149 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~~---~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~--~~v~W~~ 149 (785)
|.+++.+|+|.|.|.+.+..+. ......|.|......+|.+.... ...+..|+.+.|.|.+.+. |. +.|.|++
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~ 161 (220)
T 2fbj_H 83 MSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGK 161 (220)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESC
T ss_pred ECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEec
Confidence 9999999999999999987543 12335677765444566665443 3446789999999999886 76 6999999
Q ss_pred CCEEcccc---eEEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEE
Q psy2775 150 DGKLIKDR---QITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVE 193 (785)
Q Consensus 150 ~g~~~~~~---~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 193 (785)
+|..+... .....++ .+.|.|.....+|+|.|+|.|.|..+...
T Consensus 162 ~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 162 SGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred CCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 98765211 1111122 23589999889999999999999987643
No 279
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.76 E-value=1.4e-18 Score=167.24 Aligned_cols=180 Identities=13% Similarity=0.158 Sum_probs=117.3
Q ss_pred CCCeeeecCCceE--ecCCCeEEEEEEEEec---CC-CeeEEEECCEEccCCCCEEEe-ecCCccceEEEEEEcccCCCC
Q psy2775 11 IPPTFSKKTKPVY--AEENSEVTLEVRLVAV---PE-PDLLWYYNGEPLQETDEVVFS-DQSDMHSYVSIVTIKSIKKRE 83 (785)
Q Consensus 11 ~~p~~~~~~~~~~--v~~G~~v~l~C~~~g~---p~-~~i~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~D 83 (785)
.+|.+...|.... +.+|++++|.|.+.|. |. +.|.|++++..+......... ..++.....+.|+|.+++.+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 4556554444444 8999999999999887 33 789999999877543221111 122222344679999999999
Q ss_pred CeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCC-eEEEeECCEEcccceE--
Q psy2775 84 EGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVEWYKDGKLIKDRQI-- 159 (785)
Q Consensus 84 ~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~W~~~g~~~~~~~~-- 159 (785)
+|.|+|.|.|..+.......+........+|.+...+.......|+.+.|.|.+.| .|.+ .|+|++||..+.....
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~ 167 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTA 167 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECC
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecc
Confidence 99999999998663211112211112335676654333322345999999999998 5655 9999999998754321
Q ss_pred -E-EeCC----EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 160 -T-SEKN----THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 160 -~-~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
. ..++ ...|.|.....+|.|.|+|.|.|...
T Consensus 168 ~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 168 PVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp CEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred cEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 1 1122 12455665555679999999999764
No 280
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.76 E-value=1.6e-18 Score=168.25 Aligned_cols=176 Identities=13% Similarity=0.141 Sum_probs=122.2
Q ss_pred CCee-eecCCceEecCCCeEEEEEEEEec-CC-C-eeEEEECCEEc-cCCCCEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 12 PPTF-SKKTKPVYAEENSEVTLEVRLVAV-PE-P-DLLWYYNGEPL-QETDEVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 12 ~p~~-~~~~~~~~v~~G~~v~l~C~~~g~-p~-~-~i~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
+|.+ ...|..+.+.+|++++|.|.+.|. |. + .|.|+++|..+ ...........++.....+.|+|.+++.+|+|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 4444 567888889999999999999885 63 4 99999998877 333333223333444455789999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEeCC--CCCCCceecC-CCceEeccCCcEEEEEEEecc-C-CCeEEEeECCEEcccceE--
Q psy2775 87 YTVVAKNREGEAKMDIPVKVNTG--KPEKPSILEP-LHDVSITEGESAVLSVQVGGE-P-SPKVEWYKDGKLIKDRQI-- 159 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~~~--~~~~p~i~~~-~~~~~~~~G~~v~l~C~~~g~-p-~~~v~W~~~g~~~~~~~~-- 159 (785)
|+|.|.|..+.. .+.+.|... ...+|.+... +.... ..|..+.|.|.+.|+ | .+.|+|++||..+.....
T Consensus 92 Y~C~~~~~~~~~--~~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~ 168 (231)
T 2w59_A 92 FTCTVQHEELPL--PLSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVT 168 (231)
T ss_dssp EEEEEECTTCSS--CEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEE
T ss_pred EEEEEEcCCCCC--ceEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECCCccccc
Confidence 999999987542 223334321 2245655432 22222 235679999999985 4 369999999999865431
Q ss_pred ---EE---------eC-C----EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 160 ---TS---------EK-N----THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 160 ---~~---------~~-~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
.. .+ + .+.|.|.....+|.|.|+|.|.|...
T Consensus 169 ~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 169 TAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp CCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 11 12 2 24688888888899999999999864
No 281
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.76 E-value=1.6e-17 Score=162.80 Aligned_cols=180 Identities=15% Similarity=0.145 Sum_probs=120.4
Q ss_pred ccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECC--EE---cc---------cCCCEEEEEeCcEEEEEEccCCCCCc
Q psy2775 418 ISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDG--KE---IA---------FSENVTLSIDGKKQKLIIFSAGLEDA 482 (785)
Q Consensus 418 ~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~--~~---~~---------~~~~~~~~~~~~~~~L~i~~~~~~d~ 482 (785)
+...+....+.+|++++|.|.+.+ +.+.+.|+|+. .. +. ...++.+..++....|+|.+++.+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHC
Confidence 344556778999999999999987 57889999853 11 10 13466666666678999999999999
Q ss_pred EEEEEEEeecCc--ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCe
Q psy2775 483 GEYSCRVGDTGD--KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPL 560 (785)
Q Consensus 483 G~Y~C~a~n~g~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~ 560 (785)
|.|.|.|.|.+. ......|.|..++..-. .... ...++.
T Consensus 84 G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~----~~~~-----------------------------------~~~~~~ 124 (242)
T 2znx_A 84 GMYFCQQSNSXPYTFGGGTKLEITGGGGSGG----GGSG-----------------------------------GGGSDI 124 (242)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC------------------------------------------------------CC
T ss_pred EEEEEeEecCCceEECCCEEEEEcCCCCCCc----cccc-----------------------------------ccccce
Confidence 999999999622 22346777776531000 0000 000122
Q ss_pred EeeeeeeeeeeecCeEEEEEEEecCC--CCceEEEeCC--EEec----------------CCCCeeEEee--CCeEEEEE
Q psy2775 561 FIERFEEKTVKEKGTIRLMAKVKASP--APSIVWFRNN--KPLL----------------SSPKKREIFD--GENIILEL 618 (785)
Q Consensus 561 ~~~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~~--~~i~----------------~~~~~~~~~~--~~~~~L~i 618 (785)
++..+....+.+|++++|.|.+.|.| .+.+.|+|++ ..+. ...++.+..+ +...+|+|
T Consensus 125 ~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I 204 (242)
T 2znx_A 125 QLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDL 204 (242)
T ss_dssp EEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEE
T ss_pred eeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEE
Confidence 33333345689999999999999986 4789999953 2220 1233333332 34578999
Q ss_pred ccCCCCCCceeEEEEEEcC
Q psy2775 619 KEADSETDAGDYKVVATNE 637 (785)
Q Consensus 619 ~~~~~~~d~G~Y~C~a~n~ 637 (785)
.+++. +|+|.|+|.|.|.
T Consensus 205 ~~v~~-~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 205 NSVTT-EDTATYYCANXDG 222 (242)
T ss_dssp CSCCG-GGCEEEEEEETTS
T ss_pred CCCCc-CcCEEEEEeccCC
Confidence 99999 9999999999984
No 282
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.76 E-value=4.1e-17 Score=161.60 Aligned_cols=191 Identities=14% Similarity=0.183 Sum_probs=128.6
Q ss_pred CCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EE---c--------------ccCCCEEEEEe--CcEEEEEEccCC
Q psy2775 423 QDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KE---I--------------AFSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~---~--------------~~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
....+.+|++++|.|.+.+ + .+.+.|++.. .. + ....++.+..+ .....|+|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (256)
T 3umt_A 10 GLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLT 89 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCC
Confidence 3456889999999999987 3 5789999832 11 1 12245666554 346789999999
Q ss_pred CCCcEEEEEEEeec-----CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 479 LEDAGEYSCRVGDT-----GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~-----g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
.+|+|.|.|.|.|. +.....+.|.|...+..... .... .
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~--~~~~----------------------------------~ 133 (256)
T 3umt_A 90 SEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGG--GGSG----------------------------------G 133 (256)
T ss_dssp GGGCEEEEEEECCSTTCCSCEECCCEEEEECC------------------------------------------------
T ss_pred cccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccC--cccC----------------------------------C
Confidence 99999999999985 11233466777643100000 0000 0
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeC--CEEec------------CCCCeeEEeeCCeEEEEEc
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRN--NKPLL------------SSPKKREIFDGENIILELK 619 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~--~~~i~------------~~~~~~~~~~~~~~~L~i~ 619 (785)
....+|.+...+....+.+|++++|.|.+.+.|.+.+.|||+ +..+. ...++.....+..++|+|.
T Consensus 134 ~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 213 (256)
T 3umt_A 134 GGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTIS 213 (256)
T ss_dssp ---CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEEC
T ss_pred CCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEEC
Confidence 000125666666778899999999999999999999999994 22211 1234555556677889999
Q ss_pred cCCCCCCceeEEEEEEcCCcceEE-EEEEEEE
Q psy2775 620 EADSETDAGDYKVVATNELGSATH-GARVTVD 650 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~ 650 (785)
+++. +|+|.|.|.|.|..+.... ...|.|.
T Consensus 214 ~v~~-~D~G~Y~C~~~~~~~~~fg~gt~L~V~ 244 (256)
T 3umt_A 214 SLES-EDFVDYYCLQYASSPPTFGGGTKLEIK 244 (256)
T ss_dssp SCCG-GGCSEEEEEECSSSSCEECCCEEEEEC
T ss_pred CCCh-hHCEEEEEEEeeCCCcEECCCEEEEEE
Confidence 9999 9999999999997654433 2566665
No 283
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.75 E-value=8.5e-18 Score=161.01 Aligned_cols=173 Identities=14% Similarity=0.163 Sum_probs=118.5
Q ss_pred CCCeEEecCCcEEEEEEEeCC---CceEEEEEC--CEEcc----------------cCCCEEEEEe--CcEEEEEEccCC
Q psy2775 422 LQDVKVSRDEKASFEIELTKG---DALVKWYKD--GKEIA----------------FSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~--~~~~~----------------~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
+....+.+|++++|.|.+.+. .+.+.|+|+ +.... ...++.+..+ +....|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 345578899999999999973 378999985 22211 2356666653 245789999999
Q ss_pred CCCcEEEEEEEeecCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCC
Q psy2775 479 LEDAGEYSCRVGDTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQA 558 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~ 558 (785)
.+|+|.|+|.|.|.........|.|...+. .+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~l~V~~~~~------------------------------------------------~~ 118 (210)
T 3d9a_H 87 TEDTATYYCANWDGDYWGQGTLVTVSAAKT------------------------------------------------TP 118 (210)
T ss_dssp GGGCEEEEEEETTSSCBCCCEEEEECCCCC------------------------------------------------BC
T ss_pred cccCEEEEEEEecCcccccceEEEeccCCC------------------------------------------------CC
Confidence 999999999999852222345677654210 01
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeC---CeEEEEEccCCCCCCceeEEEE
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDG---ENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~---~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
|.+........+.+|+.++|.|.+.|. |.| .|.|++++..+...........+ ....|.|.++.. +| |.|+|.
T Consensus 119 P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~~-g~Y~C~ 196 (210)
T 3d9a_H 119 PSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTW-PS-ETVTCN 196 (210)
T ss_dssp CEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGT-TT-SCCEEE
T ss_pred CEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHc-CC-CcEEEE
Confidence 333322223456789999999999997 888 99999998764211111111111 134699999887 67 999999
Q ss_pred EEcCCcceEEE
Q psy2775 634 ATNELGSATHG 644 (785)
Q Consensus 634 a~n~~g~~~~~ 644 (785)
|.|..|.....
T Consensus 197 a~n~~~~~~~~ 207 (210)
T 3d9a_H 197 VAHPASSTKVD 207 (210)
T ss_dssp EEEGGGTEEEE
T ss_pred EEeCCCCcccc
Confidence 99999976543
No 284
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.75 E-value=6.5e-19 Score=176.17 Aligned_cols=177 Identities=12% Similarity=0.164 Sum_probs=110.8
Q ss_pred eeeeeeecCeEEEEEEEecCCCCceEEEeCC--EE---e---------cCCC----CeeEEe-eCCeEEEEEccCCCCCC
Q psy2775 566 EEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--KP---L---------LSSP----KKREIF-DGENIILELKEADSETD 626 (785)
Q Consensus 566 ~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~~---i---------~~~~----~~~~~~-~~~~~~L~i~~~~~~~d 626 (785)
..+.+.+|++++|.|.+.+ |.+.|.|||.. .. + .... ++.... ....++|+|.+++. +|
T Consensus 35 ~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~-~D 112 (270)
T 3qib_D 35 RYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEA-GD 112 (270)
T ss_dssp SEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCG-GG
T ss_pred CeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCH-hH
Confidence 3567899999999999876 77899999822 11 0 0000 222221 23467899999999 99
Q ss_pred ceeEEEEEEcCCc----ceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCC
Q psy2775 627 AGDYKVVATNELG----SATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPP 702 (785)
Q Consensus 627 ~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~ 702 (785)
+|.|.|.|.|..+ .....+.|.|... +....+|.+....+.
T Consensus 113 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~~~~P~v~~~~~~ 157 (270)
T 3qib_D 113 SALYLCASSLNWSQDTQYFGPGTRLLVLED-----------------------------------LKNVFPPEVAVFEPS 157 (270)
T ss_dssp CEEEEEEEESCTTCCCCEECCCEEEEEESC-----------------------------------STTCBCCEEEEEECC
T ss_pred CeEEEEEEecCCCccceEECCcEEEEEccc-----------------------------------cccccCCceEEECCC
Confidence 9999999997432 2223345555410 001124444322223
Q ss_pred cEEeecCCeEEEEEEEec-CCCC-ceEEeECCEEeeecccccc----------c--hhhhcccccceeeeee-ceEEEEE
Q psy2775 703 EVLVKKGEDLKIEVRFKA-LPPP-KAEWTVNGTVIVPSKRVKG----------K--AEFIKKLDDLEVKERE-NAVLEVE 767 (785)
Q Consensus 703 ~~~~~~g~~~~l~C~~~g-~P~p-~i~W~~~~~~~~~~~~~~~----------~--~~~~~~l~~~~v~~~~-~~~~~c~ 767 (785)
...+..|+.++|.|.+.| .|.| .|.|++||..+..+.+... . ......|.+......| .|.|+|.
T Consensus 158 ~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~ 237 (270)
T 3qib_D 158 EAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQ 237 (270)
T ss_dssp HHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEE
T ss_pred ccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEE
Confidence 333556999999999999 6777 8999999999977543321 0 1111234444444445 8999999
Q ss_pred Eeccc--ceeEEee
Q psy2775 768 VTSDK--ADVKWFK 779 (785)
Q Consensus 768 ~~~~~--~~~~w~~ 779 (785)
|.++. -+..|..
T Consensus 238 v~~~~l~~~~~~~~ 251 (270)
T 3qib_D 238 VQFYGLSENDEWTQ 251 (270)
T ss_dssp EEECCBCTTSCCCS
T ss_pred EEecCCCCcccccc
Confidence 98743 2346654
No 285
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.75 E-value=5.5e-18 Score=167.47 Aligned_cols=175 Identities=15% Similarity=0.174 Sum_probs=121.5
Q ss_pred cccccCCCeEEecCCcEEEEEEEeCC------CceEEEEECC--EEc------------ccCCCEEEEEeCcEEEEEEcc
Q psy2775 417 EISVPLQDVKVSRDEKASFEIELTKG------DALVKWYKDG--KEI------------AFSENVTLSIDGKKQKLIIFS 476 (785)
Q Consensus 417 ~~~~~~~~~~v~~g~~~~l~C~~~~~------~~~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~L~i~~ 476 (785)
.+..++..+.+.+|++++|.|.+.+. .+.+.|+|++ ..+ ....++.+...+....|+|.+
T Consensus 36 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 115 (252)
T 3bkj_L 36 LMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISR 115 (252)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred EEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECC
Confidence 34444567788999999999999874 3789999954 111 113466666667778999999
Q ss_pred CCCCCcEEEEEEEeec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCC
Q psy2775 477 AGLEDAGEYSCRVGDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGS 554 (785)
Q Consensus 477 ~~~~d~G~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 554 (785)
++.+|+|.|+|.|.|. +. ......|.|.....
T Consensus 116 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~---------------------------------------------- 149 (252)
T 3bkj_L 116 VEAEDLGVYYCFQASLVPLTFGAGTKLELKRADA---------------------------------------------- 149 (252)
T ss_dssp CCGGGCEEEEEEECSBSSCEECCCEEEEECCCCB----------------------------------------------
T ss_pred CCcccCEEEEEEEEcCCccEECCCEEEEEeCCCc----------------------------------------------
Confidence 9999999999999986 32 12335677754210
Q ss_pred CCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCC-CC-eeEEe-eCC----eEEEEEccCCCCC
Q psy2775 555 PGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSS-PK-KREIF-DGE----NIILELKEADSET 625 (785)
Q Consensus 555 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~-~~-~~~~~-~~~----~~~L~i~~~~~~~ 625 (785)
+|.+........+.+|+.++|.|.+.|. |++ .|+|+|+|..+..+ .. ..... .++ .+.|.|.++.. +
T Consensus 150 ---~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~ 225 (252)
T 3bkj_L 150 ---APTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEY-E 225 (252)
T ss_dssp ---CCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHH-H
T ss_pred ---CcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhc-c
Confidence 1333332223334579999999999985 554 79999999988654 11 00111 111 24699999988 8
Q ss_pred CceeEEEEEEcCCcce
Q psy2775 626 DAGDYKVVATNELGSA 641 (785)
Q Consensus 626 d~G~Y~C~a~n~~g~~ 641 (785)
|+|.|+|.|.|.....
T Consensus 226 d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 226 RHNSYTCEATHKTSTS 241 (252)
T ss_dssp HCCEEEEEEECTTCSS
T ss_pred CCCeEEEEEEeCCCCC
Confidence 9999999999987654
No 286
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.75 E-value=1.3e-17 Score=163.49 Aligned_cols=172 Identities=16% Similarity=0.170 Sum_probs=117.8
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--E---Ecc---------CCCCEEEeecCCccceEEEEEEcc
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--E---PLQ---------ETDEVVFSDQSDMHSYVSIVTIKS 78 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~---~~~---------~~~~~~~~~~~~~~~~~~~L~i~~ 78 (785)
+.|...|..+.+.+|++++|.|.+.+.|.+.+.|++++ . .+. ...++.+...+ ...+|+|.+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~ 77 (242)
T 2znx_A 2 IVLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSG----TDFTLSINS 77 (242)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET----TEEEEEESS
T ss_pred CcEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCC----CEEEEEECC
Confidence 45778899999999999999999998888999999953 1 111 12344433211 125699999
Q ss_pred cCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCCCC---------CCCceecCCCceEeccCCcEEEEEEEeccC--CCeEE
Q psy2775 79 IKKREEGVYTVVAKNREGEA-KMDIPVKVNTGKP---------EKPSILEPLHDVSITEGESAVLSVQVGGEP--SPKVE 146 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~---------~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p--~~~v~ 146 (785)
++.+|+|.|.|.+.|..+.. .....|.|...+. .++.+...+....+.+|++++|.|.+.+.| .+.+.
T Consensus 78 v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~ 157 (242)
T 2znx_A 78 VETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXS 157 (242)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEE
T ss_pred CChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCccee
Confidence 99999999999999875432 2234566653111 112222333345689999999999998865 47899
Q ss_pred EeEC--CEEcc-----------------cceEEE----eCCEEEEEEcccCCCCcEEEEEEEEcC
Q psy2775 147 WYKD--GKLIK-----------------DRQITS----EKNTHTLTLIQCSTKDKGRYSVKVTNK 188 (785)
Q Consensus 147 W~~~--g~~~~-----------------~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 188 (785)
|+|+ +..+. ...+.. .....+|.|.+++.+|+|.|.|.|.|.
T Consensus 158 W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 158 XIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred eEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 9994 32220 111111 134568999999999999999999874
No 287
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.75 E-value=1.6e-17 Score=160.69 Aligned_cols=174 Identities=13% Similarity=0.163 Sum_probs=120.8
Q ss_pred CCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EE---c----------------ccCCCEEEEEe--CcEEEEEEcc
Q psy2775 423 QDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KE---I----------------AFSENVTLSID--GKKQKLIIFS 476 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~---~----------------~~~~~~~~~~~--~~~~~L~i~~ 476 (785)
....+.+|++++|.|.+.+ + .+.+.|+++. .. + ....++.+..+ .....|+|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 87 (222)
T 1q9r_B 8 GGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNT 87 (222)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECc
Confidence 3557889999999999997 3 5689999852 21 1 01246666654 3467899999
Q ss_pred CCCCCcEEEEEEEeec-C-----cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccccccc
Q psy2775 477 AGLEDAGEYSCRVGDT-G-----DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTC 550 (785)
Q Consensus 477 ~~~~d~G~Y~C~a~n~-g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 550 (785)
++.+|+|.|.|.|.|. + .....+.|.|...+.
T Consensus 88 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------ 125 (222)
T 1q9r_B 88 LRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKT------------------------------------------ 125 (222)
T ss_dssp CCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCC------------------------------------------
T ss_pred CCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCC------------------------------------------
Confidence 9999999999999986 3 222446777765210
Q ss_pred CCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeCC----eEEEEEccCCCC
Q psy2775 551 PLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDGE----NIILELKEADSE 624 (785)
Q Consensus 551 ~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~~----~~~L~i~~~~~~ 624 (785)
.+|.+........+.+|+.++|.|.+.|. |.| .|.|+++|..+... .......++ .+.|.|.++..
T Consensus 126 ------~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~- 197 (222)
T 1q9r_B 126 ------TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTW- 197 (222)
T ss_dssp ------BCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTT-
T ss_pred ------CCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeEcceE-eccccccCCcEEEEEEEEECchhc-
Confidence 01333332222346689999999999996 988 99999999865321 111111222 24689999888
Q ss_pred CCceeEEEEEEcCCcceEEEEEE
Q psy2775 625 TDAGDYKVVATNELGSATHGARV 647 (785)
Q Consensus 625 ~d~G~Y~C~a~n~~g~~~~~~~l 647 (785)
+| |.|+|.|.|..|.......|
T Consensus 198 ~d-g~y~C~a~n~~~~~~~~~~i 219 (222)
T 1q9r_B 198 PS-ETVTCNVAHPASSTKVDKKI 219 (222)
T ss_dssp TT-SCCEEEEEEGGGTEEEEEEC
T ss_pred CC-CeEEEEEEccCCCCcEEEec
Confidence 88 99999999999987655544
No 288
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.75 E-value=2.8e-18 Score=169.03 Aligned_cols=177 Identities=14% Similarity=0.112 Sum_probs=118.6
Q ss_pred eEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEe----------------CCEEecCC---CCeeEEe-eCCeEEEEEc
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFR----------------NNKPLLSS---PKKREIF-DGENIILELK 619 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~----------------~~~~i~~~---~~~~~~~-~~~~~~L~i~ 619 (785)
.+...+....+.+|++++|.|.+.|.|.+.|.||| ++...... .++.+.. ....++|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 3 VVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp CEEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ccEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 34555667889999999999999999999999999 33333222 3333333 3457789999
Q ss_pred cCCCCCCceeEEEEEEcCCcc----eEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCC
Q psy2775 620 EADSETDAGDYKVVATNELGS----ATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPV 695 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~~g~----~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 695 (785)
+++. +|+|.|.|.|.|..+. ....+.|.|... .....+|.
T Consensus 83 ~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~~~~P~ 126 (246)
T 4dzb_B 83 SAHP-EDSSFYICSARTSGDFGEQFFGPGTRLTVLED-----------------------------------LKNVFPPE 126 (246)
T ss_dssp SCCG-GGCEEEEEEECCSSGGGCCEECCCEEEEEESC-----------------------------------GGGCBCCE
T ss_pred CCCH-HHCEEEEEEEecCCCCcceEEcCCEEEEEecC-----------------------------------CCcccCCc
Confidence 9999 9999999999987542 223345555410 00113454
Q ss_pred cCCCCCCcEEeecCCeEEEEEEEecCCCC--ceEEeECCEEeeeccccccch------------hhhcccccceeeeee-
Q psy2775 696 IDPPPPPEVLVKKGEDLKIEVRFKALPPP--KAEWTVNGTVIVPSKRVKGKA------------EFIKKLDDLEVKERE- 760 (785)
Q Consensus 696 i~~~~~~~~~~~~g~~~~l~C~~~g~P~p--~i~W~~~~~~~~~~~~~~~~~------------~~~~~l~~~~v~~~~- 760 (785)
+....+....+..|+.++|.|.+.|.|+| .|.|++||..+..+.+..... .....|.+......|
T Consensus 127 i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~ 206 (246)
T 4dzb_B 127 VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNP 206 (246)
T ss_dssp EEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCT
T ss_pred eEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccC
Confidence 43323333446679999999999997665 899999999997754432210 111234444444455
Q ss_pred ceEEEEEEeccc
Q psy2775 761 NAVLEVEVTSDK 772 (785)
Q Consensus 761 ~~~~~c~~~~~~ 772 (785)
.|.|+|.|.++.
T Consensus 207 ~g~YtC~v~~~~ 218 (246)
T 4dzb_B 207 RNHFRCQVQFYG 218 (246)
T ss_dssp TCEEEEEEEECC
T ss_pred CCeEEEEEEecC
Confidence 899999998643
No 289
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.75 E-value=5.6e-18 Score=161.10 Aligned_cols=168 Identities=15% Similarity=0.285 Sum_probs=116.2
Q ss_pred ceEecCCCeEEEEEEEE----ecCCCeeEEEECCEEccC------------CCCEEEeecCCccceEEEEEEcccCCCCC
Q psy2775 21 PVYAEENSEVTLEVRLV----AVPEPDLLWYYNGEPLQE------------TDEVVFSDQSDMHSYVSIVTIKSIKKREE 84 (785)
Q Consensus 21 ~~~v~~G~~v~l~C~~~----g~p~~~i~W~~~~~~~~~------------~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 84 (785)
.+.+.+|++++|.|.+. +.|.+.+.|++++..+.. ..+..+...++ .+|+|.+++.+|+
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~-----~~L~I~~v~~~D~ 77 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNN-----LSIVILALRPSDE 77 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTT-----TEEEECSCCGGGC
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCC-----cEEEEecccchhC
Confidence 57899999999999985 346688999999987621 12333321111 3599999999999
Q ss_pred eEEEEEEEcCCeeE-----EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEe-ccCCCeEEEeECCEEcccce
Q psy2775 85 GVYTVVAKNREGEA-----KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVG-GEPSPKVEWYKDGKLIKDRQ 158 (785)
Q Consensus 85 G~Y~C~a~~~~~~~-----~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~-g~p~~~v~W~~~g~~~~~~~ 158 (785)
|.|+|.|.|..+.. ...+.|.|... +..|.+... ....|+.+.|.|.+. |.|.|.|+|++||..+....
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~-~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~ 152 (201)
T 1dr9_A 78 GTYECVVLKYEKDAFKREHLAEVTLSVKAD-FPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAIN 152 (201)
T ss_dssp EEEEEEEEECCTTSCEEEEEEEEEEEEECC-CCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSE
T ss_pred eEEEEEEEcCCCCccccccccEEEEEEcCC-CCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECcccc
Confidence 99999999965432 34566777542 223444321 124588999999994 89999999999999887442
Q ss_pred --EEEeC--CEEEE-EEcccCCCCcEEEEEEEEcCCeeEEEEEEE
Q psy2775 159 --ITSEK--NTHTL-TLIQCSTKDKGRYSVKVTNKEGTVESAANL 198 (785)
Q Consensus 159 --~~~~~--~~~~L-~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 198 (785)
..... +...+ .+..+..+|.|.|+|.|.|..|..+..+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 153 TTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred ceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 11221 21122 234556789999999999999887765543
No 290
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.74 E-value=2.1e-17 Score=162.73 Aligned_cols=172 Identities=13% Similarity=0.148 Sum_probs=117.7
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecC-----CCeeEEEECC--EE---cc---------CCCCEEEeecCCccceEEE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVP-----EPDLLWYYNG--EP---LQ---------ETDEVVFSDQSDMHSYVSI 73 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p-----~~~i~W~~~~--~~---~~---------~~~~~~~~~~~~~~~~~~~ 73 (785)
..+...|..+.+.+|++++|.|.+.+.+ .+.+.|++++ .. +. ...++.+...+ ...+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~ 77 (247)
T 1svz_A 2 ILMTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSG----TDFT 77 (247)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEET----TEEE
T ss_pred CcEEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCC----CEEE
Confidence 3567788999999999999999998887 6899999853 11 11 12344433211 1256
Q ss_pred EEEcccCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCCCC---------CCCceecCCCceEeccCCcEEEEEEEeccC--
Q psy2775 74 VTIKSIKKREEGVYTVVAKNREGEA-KMDIPVKVNTGKP---------EKPSILEPLHDVSITEGESAVLSVQVGGEP-- 141 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~---------~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p-- 141 (785)
|+|.+++.+|+|.|.|.+.|..+.. .....|.|..... .++.+...+....+.+|+.++|.|.+.+.+
T Consensus 78 L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~ 157 (247)
T 1svz_A 78 LKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFT 157 (247)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGG
T ss_pred EEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccC
Confidence 9999999999999999999875532 2234566653211 122233333445689999999999998864
Q ss_pred CCeEEEeECC--EEcc------------------cceEE--E--eCCEEEEEEcccCCCCcEEEEEEEEcC
Q psy2775 142 SPKVEWYKDG--KLIK------------------DRQIT--S--EKNTHTLTLIQCSTKDKGRYSVKVTNK 188 (785)
Q Consensus 142 ~~~v~W~~~g--~~~~------------------~~~~~--~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 188 (785)
.+.+.|+|++ ..+. ...+. . .....+|+|.+++.+|+|.|.|.|.|.
T Consensus 158 ~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 158 DYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp GSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred CcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 5699999953 2110 11111 1 234578999999999999999999985
No 291
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.74 E-value=4.6e-17 Score=160.32 Aligned_cols=179 Identities=16% Similarity=0.197 Sum_probs=119.3
Q ss_pred cccCCCeEEecCCcEEEEEEEeC-C-----CceEEEEECC--EE---cc---------cCCCEEEEEeCcEEEEEEccCC
Q psy2775 419 SVPLQDVKVSRDEKASFEIELTK-G-----DALVKWYKDG--KE---IA---------FSENVTLSIDGKKQKLIIFSAG 478 (785)
Q Consensus 419 ~~~~~~~~v~~g~~~~l~C~~~~-~-----~~~i~W~~~~--~~---~~---------~~~~~~~~~~~~~~~L~i~~~~ 478 (785)
...+..+.+.+|++++|.|.+.+ + .+.+.|+|+. .. +. ...++.+..++....|+|.+++
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 84 (247)
T 1svz_A 5 TQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVE 84 (247)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred EecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCC
Confidence 34556778999999999999987 4 4789999842 21 11 1356666666677899999999
Q ss_pred CCCcEEEEEEEeec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCC
Q psy2775 479 LEDAGEYSCRVGDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPG 556 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 556 (785)
.+|+|.|+|.|.|. +. ....+.|.|..++...... . ...
T Consensus 85 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~--~-------------------------------------~~~ 125 (247)
T 1svz_A 85 AEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGG--S-------------------------------------GGG 125 (247)
T ss_dssp GGGCEEEEEEECSSSSCEECCCEEEEEC----------------------------------------------------
T ss_pred HHHCEEEEEEEccCCccEECCCEEEEEECCccccccc--c-------------------------------------ccc
Confidence 99999999999986 32 2334677776542100000 0 000
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCC--CCceEEEeCC--EEe------c-----------CCCCeeEEe--eCCe
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASP--APSIVWFRNN--KPL------L-----------SSPKKREIF--DGEN 613 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~~--~~i------~-----------~~~~~~~~~--~~~~ 613 (785)
.++.++.......+.+|++++|.|.+.|.| .+.+.|+|++ ..+ . ...++.... .+..
T Consensus 126 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 205 (247)
T 1svz_A 126 GSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTST 205 (247)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTE
T ss_pred cCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCE
Confidence 012222233344689999999999999985 5699999963 211 0 023333333 3456
Q ss_pred EEEEEccCCCCCCceeEEEEEEcC
Q psy2775 614 IILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 614 ~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
++|+|.+++. +|+|.|.|.|.|.
T Consensus 206 ~~L~I~~v~~-~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 206 AFLQINNLKN-EDTATYFCVRDRH 228 (247)
T ss_dssp EEEEECSCCG-GGCEEEEEEEEEG
T ss_pred EEEEECCCCh-hHCEEEEEEEecc
Confidence 7899999999 9999999999995
No 292
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.74 E-value=7.6e-18 Score=155.57 Aligned_cols=157 Identities=17% Similarity=0.292 Sum_probs=114.4
Q ss_pred CCceEecCCCeEEEEEEEE--ecCCCeeEEEE--CCEEc----------cCCCCEEEeecCCccceEEEEEEcccCCCCC
Q psy2775 19 TKPVYAEENSEVTLEVRLV--AVPEPDLLWYY--NGEPL----------QETDEVVFSDQSDMHSYVSIVTIKSIKKREE 84 (785)
Q Consensus 19 ~~~~~v~~G~~v~l~C~~~--g~p~~~i~W~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 84 (785)
...+...+|++|+|.|... +.+.+.|.|++ ++..| ....++.+..++ +|+|.+++.+|+
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng-------sL~I~~v~~~Ds 78 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG-------TLKIKHLKTDDQ 78 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS-------CEEECSCCGGGC
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC-------CEEECCCChhhC
Confidence 4568889999999999542 23467899999 88766 234555554322 399999999999
Q ss_pred eEEEEEEEcCCeeEE--EEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEe
Q psy2775 85 GVYTVVAKNREGEAK--MDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSE 162 (785)
Q Consensus 85 G~Y~C~a~~~~~~~~--~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~ 162 (785)
|.|+|.|.|..|... ..+.|.|... ...|.+.. .+..+.|.|.+.+.|.+.|.|++||..+ .. .
T Consensus 79 G~Y~c~~~n~~g~~~~~~~~~L~V~~~-~~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~----~ 144 (182)
T 1hnf_A 79 DIYKVSIYDTKGKNVLEKIFDLKIQER-VSKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHL-KL----S 144 (182)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEECC-CCCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEE-EE----E
T ss_pred EEEEEEEEeCCCceeEEEEEEEEEcCc-CCCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEEC-CC----C
Confidence 999999999877653 4566777642 23344433 2347999999998888999999999887 11 1
Q ss_pred CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEE
Q psy2775 163 KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLN 199 (785)
Q Consensus 163 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 199 (785)
. ..|.+.. ..+|+|.|+|.|.|..+..++...+.
T Consensus 145 ~--~~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 145 Q--RVITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp S--SCEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred C--cEEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 1 1233332 47899999999999999887766553
No 293
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.74 E-value=1.5e-17 Score=161.44 Aligned_cols=175 Identities=14% Similarity=0.218 Sum_probs=117.8
Q ss_pred cCCceEecCCCeEEEEEEEEecCC----CeeEEEECC--EEc---c-------------CCCCEEEeecCCccceEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVPE----PDLLWYYNG--EPL---Q-------------ETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p~----~~i~W~~~~--~~~---~-------------~~~~~~~~~~~~~~~~~~~L~ 75 (785)
.|..+.+.+|++++|.|.+.+.+. +.+.|++++ ..+ . ...|+.+..+... ....|+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~~L~ 83 (228)
T 3bae_H 6 ESGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSR--DMVFMK 83 (228)
T ss_dssp EECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTT--TEEEEE
T ss_pred CCCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCC--CeEEEE
Confidence 467789999999999999988764 789999853 211 0 0124443332211 225699
Q ss_pred EcccCCCCCeEEEEEEEcCCe------e---EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-e
Q psy2775 76 IKSIKKREEGVYTVVAKNREG------E---AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-K 144 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~------~---~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~ 144 (785)
|.+++.+|+|.|.|.+.+..+ . ......|.|....+.+|.+........+..|+.+.|.|.+.|. |.+ .
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~ 163 (228)
T 3bae_H 84 ITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVT 163 (228)
T ss_dssp ECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCE
T ss_pred EcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEE
Confidence 999999999999999998653 1 1123567776444456766543333446789999999999886 777 9
Q ss_pred EEEeECCEEcccc---eEEEeC---CEEEEEEcccCCCCcEEEEEEEEcCCeeEEEE
Q psy2775 145 VEWYKDGKLIKDR---QITSEK---NTHTLTLIQCSTKDKGRYSVKVTNKEGTVESA 195 (785)
Q Consensus 145 v~W~~~g~~~~~~---~~~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 195 (785)
|.|+++|..+... .....+ ....|.|.....+| |.|+|.|.|..+.....
T Consensus 164 v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~ 219 (228)
T 3bae_H 164 LTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVD 219 (228)
T ss_dssp EEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred EEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEE
Confidence 9999998764211 111111 13468898888866 99999999998765443
No 294
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.74 E-value=1.6e-17 Score=160.84 Aligned_cols=172 Identities=14% Similarity=0.196 Sum_probs=118.3
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEcc-----------------CCCCEEEeecCCccceEEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPLQ-----------------ETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~~~~~~~~~~L~i 76 (785)
.|..+.+.+|++++|.|.+.+.+ .+.+.||+++ ..+. ...++.+..+.. ....+|+|
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I 83 (225)
T 1op3_H 6 ESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDL--EDFVYLQM 83 (225)
T ss_dssp EECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETT--TTEEEEEE
T ss_pred cCCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCC--CCEEEEEE
Confidence 45678999999999999998876 6789999853 2110 123444443221 12356999
Q ss_pred cccCCCCCeEEEEEEEcCCe-----e---EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEE
Q psy2775 77 KSIKKREEGVYTVVAKNREG-----E---AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVE 146 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~-----~---~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~ 146 (785)
.+++.+|+|.|.|.+.+..+ . ......|.|....+.+|.+........+..|+.+.|.|.+.|. |.+ .|.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 163 (225)
T 1op3_H 84 HKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 163 (225)
T ss_dssp CSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEE
T ss_pred CCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEE
Confidence 99999999999999998764 2 1134567776544445665432222235689999999999886 766 999
Q ss_pred EeECCEEcccc---eEEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeE
Q psy2775 147 WYKDGKLIKDR---QITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTV 192 (785)
Q Consensus 147 W~~~g~~~~~~---~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 192 (785)
|+++|..+... .....++ ...|.|.+...+| |.|+|.|.|..+..
T Consensus 164 W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~ 215 (225)
T 1op3_H 164 WNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 215 (225)
T ss_dssp CCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTE
T ss_pred EecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCc
Confidence 99998764211 1111112 3468999988888 99999999977543
No 295
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.74 E-value=1.2e-18 Score=165.45 Aligned_cols=155 Identities=17% Similarity=0.258 Sum_probs=105.6
Q ss_pred ecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEEcCCeeEEEEee
Q psy2775 24 AEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAKNREGEAKMDIP 103 (785)
Q Consensus 24 v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~ 103 (785)
+.+|++++|.|.+ |.+.|.|+|++..+... ...+ .+|.|.+++.+|+|.|+|.+.+... . .+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~------~~~~-----~~L~i~~v~~~DsG~Y~C~~~~~~s-~--~~~ 77 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL------TEDK-----KKWNLGSNAKDPRGMYQCKGSQNKS-K--PLQ 77 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE------ESSC-----CCEEEEEGGGCCEEEEEEESSSSCC-C--CEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC------CCCC-----CeEEeCCCCcCCCEEEEEEecCCCC-e--eEE
Confidence 3689999999997 77899999999877532 0111 3499999999999999999765332 1 233
Q ss_pred EEEeC---------------------------CCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEccc
Q psy2775 104 VKVNT---------------------------GKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKD 156 (785)
Q Consensus 104 v~v~~---------------------------~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~ 156 (785)
|.+.. ....++.+...+ .....+|+.+.|.|. |.|.+.+.|+++|..+..
T Consensus 78 v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~ 154 (204)
T 1sy6_A 78 VYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP-YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGG 154 (204)
T ss_dssp EEEEC------------------------------------CCC-CEEEEETTEEEEECS--CCCSSCEEEEETTEEESC
T ss_pred EEEEEeccccccccccccccccccccccccccccccccceecCC-ceeeecCCcEEEEcC--CCCCCceEEEECCEECCC
Confidence 33330 000122232222 222338999999998 788899999999998754
Q ss_pred c----eEEEeCCEEEEEEccc-CCCCcEEEEEEEEcCCeeE-EEEEEEEe
Q psy2775 157 R----QITSEKNTHTLTLIQC-STKDKGRYSVKVTNKEGTV-ESAANLNV 200 (785)
Q Consensus 157 ~----~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~-~~~~~l~V 200 (785)
. .+... ..+|.|.++ +.+|+|.|+|.|.|..|.. +..+.|.+
T Consensus 155 ~~~~~~~~~~--~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 155 DEDDKNIGSD--EDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp CTTCTTEEEE--TTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ccCCceEecC--CCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 2 12212 347999999 9999999999999999852 33444443
No 296
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.74 E-value=6.8e-17 Score=156.99 Aligned_cols=183 Identities=13% Similarity=0.151 Sum_probs=119.3
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---c---c----------CCCCEEEeecCCccceEEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---L---Q----------ETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~---~----------~~~~~~~~~~~~~~~~~~~L~i 76 (785)
..|..+.+.+|++++|.|.+.+.+ .+.+.||++. .. + . ...|+.+..+... ....|+|
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~~L~I 82 (232)
T 1dn0_B 5 QQWGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSK--NQFSLKL 82 (232)
T ss_dssp EEECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTT--TEEEEEE
T ss_pred ECCCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCC--CEEEEEE
Confidence 346678999999999999998765 5789999853 11 1 0 1234444432211 2356999
Q ss_pred cccCCCCCeEEEEEEE--cCCe----eEEEEeeEEEeCCCCCCCceecCCCceEeccC-CcEEEEEEEecc-CCC-eEEE
Q psy2775 77 KSIKKREEGVYTVVAK--NREG----EAKMDIPVKVNTGKPEKPSILEPLHDVSITEG-ESAVLSVQVGGE-PSP-KVEW 147 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~--~~~~----~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G-~~v~l~C~~~g~-p~~-~v~W 147 (785)
.+++.+|+|.|.|.+. +..+ .......|.|....+.+|.+........+..| +.++|.|.+.|. |.+ .|.|
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W 162 (232)
T 1dn0_B 83 SSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSW 162 (232)
T ss_dssp CSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEE
T ss_pred CCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEE
Confidence 9999999999999998 3211 12233567776534455666532222234578 999999999875 766 9999
Q ss_pred eE-CCEEcccce---EEEeCC----EEEEEEcccCC--CCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 148 YK-DGKLIKDRQ---ITSEKN----THTLTLIQCST--KDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 148 ~~-~g~~~~~~~---~~~~~~----~~~L~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
++ ||..+.... .....+ .+.|.|..... +|.|.|+|.|.|..+.......+.|.
T Consensus 163 ~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 163 KYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp EETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred EcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 99 998875410 000112 34688888877 88999999999999877666665554
No 297
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.74 E-value=2.3e-15 Score=172.89 Aligned_cols=334 Identities=13% Similarity=0.142 Sum_probs=199.1
Q ss_pred CCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEEEEEccc-CCCCcEEEEEEEEcCCeeEEEEEEEEeecCCCC
Q psy2775 128 GESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHTLTLIQC-STKDKGRYSVKVTNKEGTVESAANLNVDPYEPK 206 (785)
Q Consensus 128 G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 206 (785)
+..+.|.|.+.|.|.+.+.|.++|..+.... ...+.|..+ ..+.++.|+|.+.+..|..... .+.+....
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~------~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~~~~~~-- 161 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWN------RAELAISTFWPNFYQVIFEVITSGHQGYLAID-EVKVLGHP-- 161 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCE------EEEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBEEESSC--
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCcee------EEEEEEeecCCCceEEEEEEEecCCceEEEEe-eEEeeecc--
Confidence 4589999999999999999999998764321 234666654 2334588999888877765432 12222111
Q ss_pred CCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccCCCCeEE-EE--ECCEEcccceEEE
Q psy2775 207 ESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVE-WY--KDGKLIKDRQITS 283 (785)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~p~~~v~-W~--~~~~~l~~~~~~~ 283 (785)
.+.+|.+. .+....+.+|+.+.|.|.+.|.|.+.+. |+ ++|..+.......
T Consensus 162 -------------------------~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~ 215 (731)
T 2v5y_A 162 -------------------------CTRTPHFL-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKV 215 (731)
T ss_dssp -------------------------CSSSCEEC-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEE
T ss_pred -------------------------cccccccc-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEE
Confidence 12446666 4457888999999999999999999887 87 6777665322211
Q ss_pred -e--CCEEEEEEccCCCCCCeEEEEEEEeCCCc-eEEEEEEEEeccccceeeeccceeEeeCccEEEEEEEcC---CCC-
Q psy2775 284 -E--KNTHTLTLIQCSTKDKGRYSVKVTNKEGT-VESAANLNVDQGKAEFIKKLDDLEVKERENAVLEVEVTS---DKA- 355 (785)
Q Consensus 284 -~--~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~-~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~---~~~- 355 (785)
. .....|.|.++...|.|.|+|.|.|..|. ....+.|.|...| .+...+... ......+.|.|.... ..+
T Consensus 216 ~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P-~~~~~p~~~-~~~~~~v~l~w~~~~~~g~~~i 293 (731)
T 2v5y_A 216 TSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPP-VPIAPPQLA-SVGATYLWIQLNANSINGDGPI 293 (731)
T ss_dssp CCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCC-CBSSCCEEE-EECSSCEEEECCCSSBSSCSCC
T ss_pred eccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCC-CCCCCccee-ccCCceEEEEeCCcccCCCCcc
Confidence 1 12468999999999999999999999987 5555778887543 222222222 234467788886532 122
Q ss_pred ---eEEEEECCEEcCCCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEe--ccceEEE----EEEEecCCcccccCCCeE
Q psy2775 356 ---DVKWFKDGQEIKTSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLP--DQETSAE----LNVVELPPEISVPLQDVK 426 (785)
Q Consensus 356 ---~v~W~~~~~~l~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~--n~~~~~~----~~v~~~~~~~~~~~~~~~ 426 (785)
.+.|...+. ....... .....+.|.++...+...|+|.|. |..+... +.+.........++..+.
T Consensus 294 ~~Y~v~~~~~~~-----~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~~p~~~P~~~~ 367 (731)
T 2v5y_A 294 VAREVEYCTASG-----SWNDRQP-VDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLE 367 (731)
T ss_dssp CEEEEEEEESSS-----SCEEEEE-CCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCCCCSCCCEEEE
T ss_pred EEEEEEEEECCC-----CceEEec-cCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCCCCCCCCceeE
Confidence 466655321 1111111 222458999999998889999998 8655332 333222211112333333
Q ss_pred Ee--cCCcEEEEEEEeCC--------CceEEEEECCEEcccC-CCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeec-Cc
Q psy2775 427 VS--RDEKASFEIELTKG--------DALVKWYKDGKEIAFS-ENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDT-GD 494 (785)
Q Consensus 427 v~--~g~~~~l~C~~~~~--------~~~i~W~~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~-g~ 494 (785)
+. ....+.|....... ...+.|...+...... ....+........++|.++.......|+..|.|. |.
T Consensus 368 ~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 447 (731)
T 2v5y_A 368 VVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGR 447 (731)
T ss_dssp EEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCE
T ss_pred EEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCC
Confidence 32 34456666554320 1124454322100000 0000011123346888999988888899999997 54
Q ss_pred ceeEEEEEEEc
Q psy2775 495 KESKATLTVEA 505 (785)
Q Consensus 495 ~~~~~~l~V~~ 505 (785)
. .+..+.+..
T Consensus 448 s-~S~~~~~~T 457 (731)
T 2v5y_A 448 K-ESQELIVQT 457 (731)
T ss_dssp E-ECCCEEEEC
T ss_pred C-CCceEEEEc
Confidence 3 355555543
No 298
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.74 E-value=8.3e-19 Score=171.27 Aligned_cols=173 Identities=14% Similarity=0.150 Sum_probs=102.5
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE--Ec---c---------CCCCEEEeecCCccceEEEEEEc
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE--PL---Q---------ETDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~--~~---~---------~~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
.+.+...|..+.+.+|++++|.|.+.+.|.+.|.|++++. .+ . ...++.... .....+|+|.
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~~~~L~I~ 98 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG----YGTDFVFTIE 98 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE----EEEEEEEC--
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec----cCCEEEEEEC
Confidence 5667777999999999999999999888878899998542 11 0 011111111 1123479999
Q ss_pred ccCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccC-CC-eEEEeECCEEc
Q psy2775 78 SIKKREEGVYTVVAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEP-SP-KVEWYKDGKLI 154 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p-~~-~v~W~~~g~~~ 154 (785)
+++.+|+|.|+|.|.+..+.. .....|.|.. ...+|.+...+.......|+.++|.|.+.|.+ ++ .|+|++||..+
T Consensus 99 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~-~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~ 177 (233)
T 3bqu_C 99 NMLSEDVADYYCLQSDNLPYTFGGGTNLEIKR-ADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER 177 (233)
T ss_dssp ---CCCCSEEEEEECSSSSCCBCCCCBC---C-CCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC----
T ss_pred CCCHHHCEEEEEEEecCCceeecCCEEEEEeC-CCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeC
Confidence 999999999999999876532 1223455542 22366666544333445799999999998854 43 79999999887
Q ss_pred ccc-eEE----E-eC----CEEEEEEcccCCCCcEEEEEEEEcCC
Q psy2775 155 KDR-QIT----S-EK----NTHTLTLIQCSTKDKGRYSVKVTNKE 189 (785)
Q Consensus 155 ~~~-~~~----~-~~----~~~~L~i~~~~~~d~G~Y~C~a~n~~ 189 (785)
... ... . .+ ....|.|.....+|+|.|+|.|.|..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 222 (233)
T 3bqu_C 178 QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT 222 (233)
T ss_dssp -CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC-
T ss_pred CCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCC
Confidence 654 111 0 11 13478899999999999999999864
No 299
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.74 E-value=6.2e-17 Score=160.42 Aligned_cols=191 Identities=12% Similarity=0.157 Sum_probs=125.5
Q ss_pred cCCCeEEecCCcEEEEEEEeC---CCceEEEEECC--E--E-c-------------ccCCCEEEEEe--CcEEEEEEccC
Q psy2775 421 PLQDVKVSRDEKASFEIELTK---GDALVKWYKDG--K--E-I-------------AFSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 421 ~~~~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~--~-~-------------~~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
.+....+.+|++++|.|.+.+ +.+.+.|+|.. . . + ....++.+..+ .....|+|.++
T Consensus 14 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 93 (257)
T 3gkz_A 14 ESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSV 93 (257)
T ss_dssp EECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCC
Confidence 345566889999999999987 36789999832 1 1 1 11245666544 34678999999
Q ss_pred CCCCcEEEEEEEeec-Cc----ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCC
Q psy2775 478 GLEDAGEYSCRVGDT-GD----KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPL 552 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 552 (785)
+.+|+|.|+|.|.|. +. ....+.|.|..++........
T Consensus 94 ~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~------------------------------------- 136 (257)
T 3gkz_A 94 SSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSG------------------------------------- 136 (257)
T ss_dssp CGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CT-------------------------------------
T ss_pred ChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccC-------------------------------------
Confidence 999999999999985 11 123456777654210000000
Q ss_pred CCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCC-ceEEEeC--CEEec------------CCCCeeEEeeCCeEEEE
Q psy2775 553 GSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAP-SIVWFRN--NKPLL------------SSPKKREIFDGENIILE 617 (785)
Q Consensus 553 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~--~~~i~------------~~~~~~~~~~~~~~~L~ 617 (785)
....+|.+...+....+.+|++++|.|.+.+.|.+ .+.|+|+ +..+. ...++.....+..++|+
T Consensus 137 -~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~ 215 (257)
T 3gkz_A 137 -GGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLT 215 (257)
T ss_dssp -TCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred -CCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEE
Confidence 00012455555567789999999999999999888 9999994 22211 01344444556677899
Q ss_pred EccCCCCCCceeEEEEEEcCCcceEEE-EEEEEE
Q psy2775 618 LKEADSETDAGDYKVVATNELGSATHG-ARVTVD 650 (785)
Q Consensus 618 i~~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~ 650 (785)
|.+++. +|+|.|.|.|.|........ ..|.|.
T Consensus 216 I~~v~~-~D~G~Y~C~~~~~~~~~fg~gt~l~v~ 248 (257)
T 3gkz_A 216 ISSMEA-EDAASYFCHQWSSFPFTFGSGTKLEIK 248 (257)
T ss_dssp ESSCCG-GGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred ECCCCh-HHCEEEEEEEccCCceEEcCCEEEEEE
Confidence 999999 99999999999865443333 334443
No 300
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.74 E-value=1.1e-17 Score=154.42 Aligned_cols=153 Identities=18% Similarity=0.213 Sum_probs=111.3
Q ss_pred CCeEEecCCcEEEEEEEeC---CCceEEEEE--CCEEc----------ccCCCEEEEEeCcEEEEEEccCCCCCcEEEEE
Q psy2775 423 QDVKVSRDEKASFEIELTK---GDALVKWYK--DGKEI----------AFSENVTLSIDGKKQKLIIFSAGLEDAGEYSC 487 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~---~~~~i~W~~--~~~~~----------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 487 (785)
..+...+|++++|.|.... +.+.|.|+| ++..+ ...+++.+..++ +|.|.+++.+|+|.|+|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEEEEE
Confidence 3456779999999994322 356899999 88776 345666666444 79999999999999999
Q ss_pred EEeec-Ccce--eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeee
Q psy2775 488 RVGDT-GDKE--SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIER 564 (785)
Q Consensus 488 ~a~n~-g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~ 564 (785)
.|.|. |... ..+.|.|..+.. +|.+..
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~~~-------------------------------------------------~P~i~~- 113 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQERVS-------------------------------------------------KPKISW- 113 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECCCC-------------------------------------------------CCEEEE-
T ss_pred EEEeCCCceeEEEEEEEEEcCcCC-------------------------------------------------CCEEEE-
Confidence 99997 5543 355677765311 022221
Q ss_pred eeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEE
Q psy2775 565 FEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHG 644 (785)
Q Consensus 565 ~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~ 644 (785)
.+..++|.|.+.|.|.|.|.|+++|..+ .+ .. ..|.+.. .. +|+|.|+|.|.|..|...+.
T Consensus 114 -------~~~~v~L~C~~~~~p~~~~~W~~~g~~l-~~-------~~--~~i~~~~-~~-~d~G~Y~C~a~N~~~~~~s~ 174 (182)
T 1hnf_A 114 -------TCINTTLTCEVMNGTDPELNLYQDGKHL-KL-------SQ--RVITHKW-TT-SLSAKFKCTAGNKVSKESSV 174 (182)
T ss_dssp -------ETTTTEEEEECSSCSSCEEEEEESSCEE-EE-------ES--SCEEEEC-CS-CEEEEEEEEEECSSCEEEEE
T ss_pred -------ccCcEEEEeEccCCCCCEEEEEECCEEC-CC-------CC--cEEEEec-cc-CCCcEEEEEEEeCCCCcEEc
Confidence 2347899999999999999999999887 21 11 2233333 45 89999999999999988877
Q ss_pred EEE
Q psy2775 645 ARV 647 (785)
Q Consensus 645 ~~l 647 (785)
..+
T Consensus 175 ~~~ 177 (182)
T 1hnf_A 175 EPV 177 (182)
T ss_dssp EEE
T ss_pred cee
Confidence 665
No 301
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.74 E-value=2.9e-17 Score=161.97 Aligned_cols=177 Identities=14% Similarity=0.177 Sum_probs=111.4
Q ss_pred cCCCeEEecCCcEEEEEEEeC-CCc-----eEEEEECCEEccc--------CCCEE-------EE---EeCcEEEEEEcc
Q psy2775 421 PLQDVKVSRDEKASFEIELTK-GDA-----LVKWYKDGKEIAF--------SENVT-------LS---IDGKKQKLIIFS 476 (785)
Q Consensus 421 ~~~~~~v~~g~~~~l~C~~~~-~~~-----~i~W~~~~~~~~~--------~~~~~-------~~---~~~~~~~L~i~~ 476 (785)
++....+.+|++++|.|.+.+ +.+ .+.|++++..... ..... +. .......|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 345567889999999999986 444 3999996432110 00000 00 001234599999
Q ss_pred CCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 477 AGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 477 ~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
++.+|+|.|+|.|.|. +.....+.|.|..+|
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P------------------------------------------------ 120 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVASP------------------------------------------------ 120 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEBCC------------------------------------------------
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEecCC------------------------------------------------
Confidence 9999999999999997 666677888887653
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecCCC------C-eeEEee-CC----eEEEEEccC
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLSSP------K-KREIFD-GE----NIILELKEA 621 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~~~------~-~~~~~~-~~----~~~L~i~~~ 621 (785)
.+.... ...+..|+.++|.|.+.| +|.| .|+|+|+|.++.... . ...... ++ ...|.|...
T Consensus 121 ----~v~~~~-~~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~ 195 (248)
T 3pv7_A 121 ----ASRLLL-DQVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSS 195 (248)
T ss_dssp ----EEEEEC-C--------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--
T ss_pred ----ceEEec-CCccccCCCcEEEEEEccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCc
Confidence 211111 123456788899999999 7999 999999996543210 0 011111 11 246888888
Q ss_pred CCCCCceeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 622 DSETDAGDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 622 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
.. +|.|.|+|.|.|..+....+..+.|.|
T Consensus 196 ~~-~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 196 QE-DPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp CC-CTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred cc-cCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 88 999999999999999865555555554
No 302
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.74 E-value=1.7e-17 Score=160.97 Aligned_cols=180 Identities=14% Similarity=0.200 Sum_probs=119.9
Q ss_pred cCCceEecCCCeEEEEEEEEecCCC---eeEEEECCEEccC----------------CCCEEEeec---CCccceEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVPEP---DLLWYYNGEPLQE----------------TDEVVFSDQ---SDMHSYVSIVT 75 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p~~---~i~W~~~~~~~~~----------------~~~~~~~~~---~~~~~~~~~L~ 75 (785)
.|..+.+.+|++|+|.|.+.+.+.+ .|.|+|++..+.. ..+..+... .......++|+
T Consensus 7 vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~ 86 (225)
T 4fmk_A 7 VLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLA 86 (225)
T ss_dssp CCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEE
T ss_pred eCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEE
Confidence 3456889999999999999887665 4899997653210 111111111 11111224599
Q ss_pred EcccCCCCCeEEEEEEEcCCeeEEE-EeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEE
Q psy2775 76 IKSIKKREEGVYTVVAKNREGEAKM-DIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKL 153 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~~~~~-~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~ 153 (785)
|.+++.+|+|.|+|.|.+..+.... ...+.+. .+|.+...+.......++.+.+.|.+ .+.|++.+.|++++..
T Consensus 87 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~ 162 (225)
T 4fmk_A 87 FRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI----AQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGG 162 (225)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE----BCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCC
T ss_pred EccCCHHHCcceEEEEEeCCCcceeeeeeeeee----cCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCcc
Confidence 9999999999999999987665443 3334443 34444444445556677888888876 5578889999998766
Q ss_pred cccceEEE--eCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEE--EEEEee
Q psy2775 154 IKDRQITS--EKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESA--ANLNVD 201 (785)
Q Consensus 154 ~~~~~~~~--~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~ 201 (785)
+....... ..+ .+.|.|.++..+|+|.|+|.|.|..+..... +.|.|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~ 218 (225)
T 4fmk_A 163 EAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVR 218 (225)
T ss_dssp EEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBT
T ss_pred ccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEE
Confidence 54332111 111 3469999999999999999999998765444 444443
No 303
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.74 E-value=6.7e-18 Score=168.76 Aligned_cols=203 Identities=14% Similarity=0.084 Sum_probs=117.7
Q ss_pred CCCCceEEEEEEeccceEEEEEEEecCCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEEC--CEEc-----------
Q psy2775 389 SVHDEGEYTCSLPDQETSAELNVVELPPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKD--GKEI----------- 455 (785)
Q Consensus 389 ~~~d~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~--~~~~----------- 455 (785)
...|.+.|.|.+.+..+..... ....+..++..+.+.+|++++|.|.+.++.+.+.|+|. +...
T Consensus 4 ~~~~~~~y~~~~~~~~g~~~~~---~~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~ 80 (270)
T 3qib_D 4 ERADLIAYLKQATKGGGGSGGG---GGMKVIQTPRYLVKGQGQKAKMRCIPEKGHPVVFWYQQNKNNEFKFLINFQNQEV 80 (270)
T ss_dssp ---------------------------CCCEEECSEEEEETTSCEEEEEECCTTCCEEEEEEECTTCCEEEEEEEETTEE
T ss_pred hhhhHHHHHHHHhccCCccccc---cceeEEeCCCeEEEcCCCCEEEEEEecCCCceEEEEEECCCCCcEEEEEECCCCc
Confidence 4678999999998865533221 22344455667889999999999998877889999982 1110
Q ss_pred -ccC---C-CEEEEE-eCcEEEEEEccCCCCCcEEEEEEEeecC-----cceeEEEEEEEcCcccccccCCCeeEEeccC
Q psy2775 456 -AFS---E-NVTLSI-DGKKQKLIIFSAGLEDAGEYSCRVGDTG-----DKESKATLTVEAPAVEFLTKLPSVTLVPHLG 524 (785)
Q Consensus 456 -~~~---~-~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~ 524 (785)
... + ++.+.. ......|+|.+++.+|+|.|.|.+.+.+ .......|.|......
T Consensus 81 ~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~--------------- 145 (270)
T 3qib_D 81 LQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKN--------------- 145 (270)
T ss_dssp EEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTT---------------
T ss_pred eecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcccccc---------------
Confidence 000 0 333332 2345789999999999999999999631 2223456777652100
Q ss_pred ceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEe-eeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecC
Q psy2775 525 DATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFI-ERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLS 601 (785)
Q Consensus 525 ~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~ 601 (785)
..+|.+. ..+....+.+|+.++|.|.+.| .|.| .|.|+|+|..+..
T Consensus 146 -------------------------------~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~ 194 (270)
T 3qib_D 146 -------------------------------VFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 194 (270)
T ss_dssp -------------------------------CBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred -------------------------------ccCCceEEECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCC
Confidence 0013322 2233445667999999999999 6777 8999999999865
Q ss_pred CCCeeE------Ee-eCC----eEEEEEccCCCCCC-ceeEEEEEEcCCcce
Q psy2775 602 SPKKRE------IF-DGE----NIILELKEADSETD-AGDYKVVATNELGSA 641 (785)
Q Consensus 602 ~~~~~~------~~-~~~----~~~L~i~~~~~~~d-~G~Y~C~a~n~~g~~ 641 (785)
+..... .. .++ ...|.|..... +| +|.|+|.|.|.....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~~g~YtC~v~~~~l~~ 245 (270)
T 3qib_D 195 GVCTDPQPLKEQPALNDSRYALSSRLRVSATFW-QNPRNHFRCQVQFYGLSE 245 (270)
T ss_dssp TEEECSSCEESCTTSSSCCEEEEEEEEEEHHHH-HSTTCEEEEEEEECCBCT
T ss_pred CcccccccccccccCCCCCEEEEEEEEEcHHHh-ccCCCeEEEEEEecCCCC
Confidence 322100 00 112 24578887766 66 999999999986643
No 304
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.73 E-value=3.3e-18 Score=167.18 Aligned_cols=175 Identities=14% Similarity=0.163 Sum_probs=118.1
Q ss_pred CCCeEEecCCcEEEEEEEeC-C-Cc-eEEEEECC--EEc------------ccCCCEEEEEeCcEEEEEEccCCCCCcEE
Q psy2775 422 LQDVKVSRDEKASFEIELTK-G-DA-LVKWYKDG--KEI------------AFSENVTLSIDGKKQKLIIFSAGLEDAGE 484 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~-~-~~-~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 484 (785)
+....+.+|++++|.|.+.+ + .+ .+.|+|++ ..+ ....++.....+....|+|.+++.+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 55667889999999999987 3 23 69999863 221 11346666666667899999999999999
Q ss_pred EEEEEeec-Cc---ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCe
Q psy2775 485 YSCRVGDT-GD---KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPL 560 (785)
Q Consensus 485 Y~C~a~n~-g~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~ 560 (785)
|+|.|.|. +. ....+.|.|...+. .+|.
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------------~~p~ 137 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQPK------------------------------------------------AAPS 137 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCCC------------------------------------------------CCCC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCCC------------------------------------------------CCCc
Confidence 99999997 41 11233444432110 0133
Q ss_pred EeeeeeeeeeeecCeEEEEEEEecCC-C-CceEEEeCCEEecCCCCeeE-Ee-eC----CeEEEEEccCCCCCCceeEEE
Q psy2775 561 FIERFEEKTVKEKGTIRLMAKVKASP-A-PSIVWFRNNKPLLSSPKKRE-IF-DG----ENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 561 ~~~~~~~~~v~~g~~v~l~C~~~g~P-~-p~v~W~~~~~~i~~~~~~~~-~~-~~----~~~~L~i~~~~~~~d~G~Y~C 632 (785)
+........+.+|++++|.|.+.|.+ + +.|+|+|||..+..+..... .. .+ ..+.|.|.++.. +|+|.|+|
T Consensus 138 v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~G~Y~C 216 (234)
T 2j6e_L 138 VTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQW-KSHRSYSC 216 (234)
T ss_dssp CCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGT-TTSCCEEE
T ss_pred ccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHc-CCCCeEEE
Confidence 33222222334688999999999964 4 38999999998865421100 11 11 235799999998 99999999
Q ss_pred EEEcCCcceEEEE
Q psy2775 633 VATNELGSATHGA 645 (785)
Q Consensus 633 ~a~n~~g~~~~~~ 645 (785)
.|.|..+...+++
T Consensus 217 ~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 217 QVTHEGSTVEKTV 229 (234)
T ss_dssp EEEBTTBCCCEEE
T ss_pred EEEeCCCceEEec
Confidence 9999988755443
No 305
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.73 E-value=1.4e-17 Score=152.67 Aligned_cols=154 Identities=19% Similarity=0.278 Sum_probs=110.4
Q ss_pred CceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC------------CCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 20 KPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE------------TDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 20 ~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~------------~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
..+.+.+|++|+|.|.+. .|.+.|.|++++..+.. ..+..+...+ .+|+|.+++.+|+|.|
T Consensus 3 ~~v~~~~G~~VtL~c~~~-~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~------~sL~I~~v~~~DsG~Y 75 (171)
T 1ccz_A 3 QQIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVS------GSLTIYNLTSSDEDEY 75 (171)
T ss_dssp EEEEEETTCCEEECCCCS-SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTT------CCEEECSCCGGGCEEE
T ss_pred cEEEEEcCCCEEEcCCCC-CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCC------CeEEECCCChhhCceE
Confidence 467899999999999984 47889999999875421 1122221111 3499999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECCEEcccceEEEeCCEEE
Q psy2775 88 TVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDGKLIKDRQITSEKNTHT 167 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~ 167 (785)
+|.|.+..+ ...+.|.|.. .+..|.+...... ..|.|.+.+.|.+.++|++||..+.... ...
T Consensus 76 ~C~~~n~~~--~~~~~L~V~~-~~~~p~i~~~~~~--------~~L~C~~~~~p~p~i~W~~~~~~l~~~~------~~~ 138 (171)
T 1ccz_A 76 EMESPNITD--TMKFFLYVLE-MVSKPMIYWECSN--------ATLTCEVLEGTDVELKLYQGKEHLRSLR------QKT 138 (171)
T ss_dssp EEECTTCCS--CEEEEEEEEC-CCCCCEEEEETTT--------TEEEEECSSCSSCEEEEEETTEEEEEES------SSE
T ss_pred EEEEeCCCC--cEEEEEEEEC-cCCCCEEEEecCC--------cEEEEEeCCCCCcEEEEEECCEECcCCc------ceE
Confidence 999998877 5566777764 2234555432211 2799999988899999999999875321 113
Q ss_pred EEEcccCCCCcEEEEEEEEcCCeeEEEEEEEE
Q psy2775 168 LTLIQCSTKDKGRYSVKVTNKEGTVESAANLN 199 (785)
Q Consensus 168 L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 199 (785)
|.+. ..+|+|.|+|.|.|..+..+..+.|.
T Consensus 139 l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 139 MSYQ--WTNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp EEEE--CSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EEEe--ccCCCceEEEEEEcccCcccceeEEe
Confidence 4333 47889999999999999877665543
No 306
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.73 E-value=5.7e-17 Score=160.68 Aligned_cols=168 Identities=17% Similarity=0.176 Sum_probs=113.8
Q ss_pred ecCCceEecCCCeEEEEEEEEec--CCCeeEEEECC--EE---c---------cCCCCEEEeecCCccceEEEEEEcccC
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNG--EP---L---------QETDEVVFSDQSDMHSYVSIVTIKSIK 80 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~--~~---~---------~~~~~~~~~~~~~~~~~~~~L~i~~~~ 80 (785)
..|..+.+.+|++++|.|.+.+. +.+.+.|+|++ .. + ....++.+...+ ...+|+|.+++
T Consensus 7 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~I~~v~ 82 (256)
T 3ux9_B 7 TQPPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSG----TSASLAITGLQ 82 (256)
T ss_dssp BCCSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEET----TEEEEEECSCC
T ss_pred ecCCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccC----CEEEEEECCCC
Confidence 34556899999999999999877 77899999853 11 1 012344443222 12569999999
Q ss_pred CCCCeEEEEEEEcCCe---eEEEEeeEEEeCCCCC-----------------CCceecCCCceEeccCCcEEEEEEEecc
Q psy2775 81 KREEGVYTVVAKNREG---EAKMDIPVKVNTGKPE-----------------KPSILEPLHDVSITEGESAVLSVQVGGE 140 (785)
Q Consensus 81 ~~D~G~Y~C~a~~~~~---~~~~~~~v~v~~~~~~-----------------~p~i~~~~~~~~~~~G~~v~l~C~~~g~ 140 (785)
.+|+|.|.|.+.+..+ .......|.|...... .+.+..+ ....+.+|+.++|.|.+.+.
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~G~~v~L~C~~~~~ 161 (256)
T 3ux9_B 83 SEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVES-GGGLVQPGGSLRLSCAASGF 161 (256)
T ss_dssp GGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEE-CCEEECTTCCEEEEEEEESS
T ss_pred hhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcC-CCeEEcCCCeEEEEEEEeCC
Confidence 9999999999998643 2223355666532111 1233333 34568899999999999886
Q ss_pred C--CCeEEEeEC--CEEccc------------------ce--EEE--eCCEEEEEEcccCCCCcEEEEEEEEcCC
Q psy2775 141 P--SPKVEWYKD--GKLIKD------------------RQ--ITS--EKNTHTLTLIQCSTKDKGRYSVKVTNKE 189 (785)
Q Consensus 141 p--~~~v~W~~~--g~~~~~------------------~~--~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 189 (785)
+ .+.+.|+|+ +..+.. .. ... .....+|+|.+++.+|+|.|+|.|.|..
T Consensus 162 ~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 162 TFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp CGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred cccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 6 679999986 322210 01 111 1346679999999999999999999863
No 307
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.73 E-value=6.6e-17 Score=160.48 Aligned_cols=174 Identities=17% Similarity=0.199 Sum_probs=119.8
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecC------CCeeEEEECC--EE---cc---------CCCCEEEeecCCccce
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVP------EPDLLWYYNG--EP---LQ---------ETDEVVFSDQSDMHSY 70 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p------~~~i~W~~~~--~~---~~---------~~~~~~~~~~~~~~~~ 70 (785)
..+.+...|..+.+.+|++|+|.|.+.+.+ .+.+.|+++. .. +. ...++.+.... .
T Consensus 4 ~~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~----~ 79 (264)
T 2gjj_A 4 ADIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSG----T 79 (264)
T ss_dssp CCCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET----T
T ss_pred cccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCC----C
Confidence 457788889999999999999999998877 6789999852 21 11 12344443211 1
Q ss_pred EEEEEEcccCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCCCC--------------CCCce-ecCCCceEeccCCcEEEE
Q psy2775 71 VSIVTIKSIKKREEGVYTVVAKNREGEA-KMDIPVKVNTGKP--------------EKPSI-LEPLHDVSITEGESAVLS 134 (785)
Q Consensus 71 ~~~L~i~~~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~--------------~~p~i-~~~~~~~~~~~G~~v~l~ 134 (785)
..+|+|.+++.+|+|.|.|.+.+..+.. .....|.|...+. .+|.+ ........+.+|+.++|.
T Consensus 80 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~ 159 (264)
T 2gjj_A 80 DFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKIS 159 (264)
T ss_dssp EEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEE
T ss_pred EEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEE
Confidence 2569999999999999999999875422 2234566654210 01222 222334578999999999
Q ss_pred EEEeccCC--CeEEEeECC--EE---cc---------------cce--EEE--eCCEEEEEEcccCCCCcEEEEEEEEcC
Q psy2775 135 VQVGGEPS--PKVEWYKDG--KL---IK---------------DRQ--ITS--EKNTHTLTLIQCSTKDKGRYSVKVTNK 188 (785)
Q Consensus 135 C~~~g~p~--~~v~W~~~g--~~---~~---------------~~~--~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 188 (785)
|.+.+.+. +.+.|+++. .. +. ... +.. .....+|.|.+++.+|+|.|.|.|.|.
T Consensus 160 C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 160 CKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 99988764 799999963 21 11 011 111 234678999999999999999999985
No 308
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.73 E-value=9.8e-18 Score=153.80 Aligned_cols=153 Identities=17% Similarity=0.164 Sum_probs=110.3
Q ss_pred CeEEecCCcEEEEEEEeCCCceEEEEECCEEccc------------CCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEee
Q psy2775 424 DVKVSRDEKASFEIELTKGDALVKWYKDGKEIAF------------SENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~------------~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
.+.+.+|++++|.|.+..+.+.|.|+|++..+.. .++..+ +....+|+|.+++.+|+|.|+|.|.|
T Consensus 4 ~v~~~~G~~VtL~c~~~~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~--~~~~~sL~I~~v~~~DsG~Y~C~~~n 81 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYL--DTVSGSLTIYNLTSSDEDEYEMESPN 81 (171)
T ss_dssp EEEEETTCCEEECCCCSSCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEE--CTTTCCEEECSCCGGGCEEEEEECTT
T ss_pred EEEEEcCCCEEEcCCCCCCcceEEEEeCCcEEEEEcCCCcccccccCCcEEE--eCCCCeEEECCCChhhCceEEEEEeC
Confidence 4567899999999998667788999999875421 122222 22234799999999999999999998
Q ss_pred cCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeeeee
Q psy2775 492 TGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVK 571 (785)
Q Consensus 492 ~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~ 571 (785)
..+ ...+.|.|..++. . |.+.....
T Consensus 82 ~~~-~~~~~L~V~~~~~-----~--------------------------------------------p~i~~~~~----- 106 (171)
T 1ccz_A 82 ITD-TMKFFLYVLEMVS-----K--------------------------------------------PMIYWECS----- 106 (171)
T ss_dssp CCS-CEEEEEEEECCCC-----C--------------------------------------------CEEEEETT-----
T ss_pred CCC-cEEEEEEEECcCC-----C--------------------------------------------CEEEEecC-----
Confidence 722 6778888876531 0 22221111
Q ss_pred ecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEE
Q psy2775 572 EKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHGARVT 648 (785)
Q Consensus 572 ~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 648 (785)
..+|.|.+.|.|.|.|+|+|+|..+..... ..|.+.+ . .|+|.|+|.|.|..|....++.|.
T Consensus 107 ---~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~---------~~l~~~~--~-~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 107 ---NATLTCEVLEGTDVELKLYQGKEHLRSLRQ---------KTMSYQW--T-NLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp ---TTEEEEECSSCSSCEEEEEETTEEEEEESS---------SEEEEEC--S-CCSSCEEEEEEETTEEEEEEECCC
T ss_pred ---CcEEEEEeCCCCCcEEEEEECCEECcCCcc---------eEEEEec--c-CCCceEEEEEEcccCcccceeEEe
Confidence 127999999999999999999998853322 2344443 4 899999999999999887766553
No 309
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.73 E-value=5.3e-17 Score=156.11 Aligned_cols=182 Identities=18% Similarity=0.294 Sum_probs=133.5
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCC--CCEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQET--DEVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
...||.| ..|..+.+.+|++++|.|.+.|.|.+.|.|++++..+... .++.+..... .++|+|.+++.+|+|.
T Consensus 16 ~~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~----~~~L~i~~~~~~d~G~ 90 (215)
T 3mtr_A 16 HMYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPS----ASYLEVTPDSENDFGN 90 (215)
T ss_dssp CCEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETT----EEEEEECCCSGGGCEE
T ss_pred eecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCC----eeEEEEecCChhhCeE
Confidence 4457888 5777799999999999999999999999999999998765 4555544332 2679999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEe----ccCCC--eEEEeECCEEcccceEE
Q psy2775 87 YTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVG----GEPSP--KVEWYKDGKLIKDRQIT 160 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~----g~p~~--~v~W~~~g~~~~~~~~~ 160 (785)
|+|.|.|..|.....+.|.|.. .|.+|..... ...+..+.|.|... +.|.. .+.|.+++.........
T Consensus 91 Y~C~a~n~~g~~~~~~~l~v~~-~P~~p~~~~~-----~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~ 164 (215)
T 3mtr_A 91 YNCTAVNRIGQESLEFILVQAD-TPSSPSIDQV-----EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY 164 (215)
T ss_dssp EEEEEECSSCEEEEEEEEEECC-CCCCCEEEEE-----EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEE
T ss_pred EEEEEEECCCceEEEEEEEECC-CCCCCcceEE-----EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccc
Confidence 9999999999988888888863 3344432211 23467789999742 22322 48898887543221111
Q ss_pred E---eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 161 S---EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 161 ~---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
. ......|.|.++...+.|.|+|.|.|..|....+..+.+.
T Consensus 165 ~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 165 DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp EHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEE
T ss_pred ccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeE
Confidence 0 0112479999999999999999999999977666555554
No 310
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.73 E-value=2.9e-17 Score=152.05 Aligned_cols=154 Identities=19% Similarity=0.267 Sum_probs=109.7
Q ss_pred CCceEecCCCeEEEEEEEEe-cCCCeeEEEEC-CEEcc------------CC--CCEEEeecCCccceEEEEEEcccCCC
Q psy2775 19 TKPVYAEENSEVTLEVRLVA-VPEPDLLWYYN-GEPLQ------------ET--DEVVFSDQSDMHSYVSIVTIKSIKKR 82 (785)
Q Consensus 19 ~~~~~v~~G~~v~l~C~~~g-~p~~~i~W~~~-~~~~~------------~~--~~~~~~~~~~~~~~~~~L~i~~~~~~ 82 (785)
...+.+.+|++|+|.|.+.+ .+.+.|.|+++ +..+. .. .|..+... ..+|+|.+++.+
T Consensus 6 ~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~------~~sL~I~~v~~~ 79 (180)
T 2dru_A 6 VPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKT------NGALRIYNVSKE 79 (180)
T ss_dssp CCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTT------TCCEEECSCCGG
T ss_pred cceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCC------CccEEEcCCCHH
Confidence 45789999999999999744 24679999994 32221 11 23333111 134999999999
Q ss_pred CCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEE-eccCCCeEEEeECCEEcccceEEE
Q psy2775 83 EEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQV-GGEPSPKVEWYKDGKLIKDRQITS 161 (785)
Q Consensus 83 D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~-~g~p~~~v~W~~~g~~~~~~~~~~ 161 (785)
|+|.|+|.+.+.. .....+.|.|.. .+..|.+.. .+..+.|.|.+ .| |.+.+.|+++|..+..
T Consensus 80 D~G~Y~C~v~~~~-~~~~~~~L~V~~-~~~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~----- 143 (180)
T 2dru_A 80 DRGDYYMRMLHET-EDQWKITMEVYE-MVSKPMIYW--------ECSNATLTCEVLEG-TDVELKLYQGKEHLRS----- 143 (180)
T ss_dssp GCEEEEEEEESSS-EEEEEEEEEEEC-CCCCCEEEE--------EGGGTEEEEECSSC-TTCEEEEEETTEEEEE-----
T ss_pred HCeEEEEEEEcCC-eEEEEEEEEEEC-CCCCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEEECCeECcC-----
Confidence 9999999998876 566677788864 223344432 34569999999 66 8899999999988751
Q ss_pred eCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEE
Q psy2775 162 EKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAAN 197 (785)
Q Consensus 162 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 197 (785)
....+|.+.. .+|+|.|+|.|.|..+..++...
T Consensus 144 -~~~~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 144 -LRQKTMSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp -ESSSEEEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred -CCCCEEEEEE--hhcCccEEEEEecCcCcccccee
Confidence 1123566533 78999999999999987766543
No 311
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.72 E-value=7.8e-17 Score=162.53 Aligned_cols=185 Identities=14% Similarity=0.210 Sum_probs=123.8
Q ss_pred eecCCceEecCCCeEEEEEEEEecC--CCeeEEEECCE--Ec---c--------------CCCCEEEeecCCccceEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNGE--PL---Q--------------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~~--~~---~--------------~~~~~~~~~~~~~~~~~~~L 74 (785)
...|..+.+.+|++++|.|.+.+.+ .+.+.|++++. .+ . ...++.+..+. .....+|
T Consensus 26 v~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~sL 103 (291)
T 2gki_A 26 LQQSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDK--SSSTAYM 103 (291)
T ss_dssp EEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEG--GGTEEEE
T ss_pred EEcCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeC--CCCEEEE
Confidence 3456689999999999999998876 57899999531 11 0 01222222211 1123579
Q ss_pred EEcccCCCCCeEEEEEEEcCC-e--eEE--EEeeEEEeCC------------CCCCCceecCCCceEeccCCcEEEEEEE
Q psy2775 75 TIKSIKKREEGVYTVVAKNRE-G--EAK--MDIPVKVNTG------------KPEKPSILEPLHDVSITEGESAVLSVQV 137 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~-~--~~~--~~~~v~v~~~------------~~~~p~i~~~~~~~~~~~G~~v~l~C~~ 137 (785)
+|.+++.+|+|.|.|.+.+.. + ... ....|.|... ...++.+...+..+.+.+|+.++|.|.+
T Consensus 104 ~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~ 183 (291)
T 2gki_A 104 ELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKS 183 (291)
T ss_dssp EECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEE
T ss_pred EECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEc
Confidence 999999999999999999874 1 111 2345666530 1124456666667889999999999999
Q ss_pred eccCCC------eEEEeEC--CEEcc-------------cce--EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEE
Q psy2775 138 GGEPSP------KVEWYKD--GKLIK-------------DRQ--ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVES 194 (785)
Q Consensus 138 ~g~p~~------~v~W~~~--g~~~~-------------~~~--~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 194 (785)
.+.+.+ .+.|+|+ |..+. ... ........+|+|.+++.+|+|.|.|.|.|.....-.
T Consensus 184 ~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg 263 (291)
T 2gki_A 184 SQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHMYTFG 263 (291)
T ss_dssp SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEC
T ss_pred CCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCceEEc
Confidence 887765 8999995 32111 111 122344678999999999999999999986543322
Q ss_pred -EEEEEeec
Q psy2775 195 -AANLNVDP 202 (785)
Q Consensus 195 -~~~l~V~~ 202 (785)
...|.|..
T Consensus 264 ~gt~l~v~~ 272 (291)
T 2gki_A 264 SGTKLEIKH 272 (291)
T ss_dssp CCEEEEEEC
T ss_pred CCEEEEEEe
Confidence 35666654
No 312
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.72 E-value=2.7e-17 Score=152.31 Aligned_cols=153 Identities=18% Similarity=0.229 Sum_probs=108.8
Q ss_pred CCeEEecCCcEEEEEEEeCC--CceEEEEEC-CEEcc------------cC--CCEEEEEeCcEEEEEEccCCCCCcEEE
Q psy2775 423 QDVKVSRDEKASFEIELTKG--DALVKWYKD-GKEIA------------FS--ENVTLSIDGKKQKLIIFSAGLEDAGEY 485 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~--~~~i~W~~~-~~~~~------------~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y 485 (785)
..+.+.+|++++|.|.+..+ .+.|.|+|+ +..+. .. +++.+ +....+|+|.+++.+|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEE
Confidence 45678899999999998553 678999994 32221 11 34444 22234699999999999999
Q ss_pred EEEEeecCcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeee
Q psy2775 486 SCRVGDTGDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERF 565 (785)
Q Consensus 486 ~C~a~n~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~ 565 (785)
+|.+.+.......+.|.|..++. .|.+.
T Consensus 85 ~C~v~~~~~~~~~~~L~V~~~~~-------------------------------------------------~P~i~--- 112 (180)
T 2dru_A 85 YMRMLHETEDQWKITMEVYEMVS-------------------------------------------------KPMIY--- 112 (180)
T ss_dssp EEEEESSSEEEEEEEEEEECCCC-------------------------------------------------CCEEE---
T ss_pred EEEEEcCCeEEEEEEEEEECCCC-------------------------------------------------CCEEE---
Confidence 99998755445567777776421 02222
Q ss_pred eeeeeeecCeEEEEEEE-ecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEE
Q psy2775 566 EEKTVKEKGTIRLMAKV-KASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHG 644 (785)
Q Consensus 566 ~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~ 644 (785)
..++.++|.|.+ .| |.|.|.|+|++..+.. ....+|.+.. . +|+|.|+|.|.|..|...+.
T Consensus 113 -----~~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~---------~~~~~l~~~~--~-~d~g~Y~C~a~N~~~~~~~~ 174 (180)
T 2dru_A 113 -----WECSNATLTCEVLEG-TDVELKLYQGKEHLRS---------LRQKTMSYQW--T-NLRAPFKCKAVNRVSQESEM 174 (180)
T ss_dssp -----EEGGGTEEEEECSSC-TTCEEEEEETTEEEEE---------ESSSEEEEEC--S-CCSSCEEEEEEETTEEEEEE
T ss_pred -----ecCCCEEEEEEeCCC-CCCEEEEEECCeECcC---------CCCCEEEEEE--h-hcCccEEEEEecCcCccccc
Confidence 134679999999 66 9999999999998751 1234566643 5 89999999999999987765
Q ss_pred EEE
Q psy2775 645 ARV 647 (785)
Q Consensus 645 ~~l 647 (785)
..+
T Consensus 175 ~~i 177 (180)
T 2dru_A 175 EVV 177 (180)
T ss_dssp ECC
T ss_pred eeE
Confidence 543
No 313
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.72 E-value=2e-17 Score=164.09 Aligned_cols=190 Identities=15% Similarity=0.196 Sum_probs=115.1
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EE---cc--C--CC----------CEEEeecCCccceEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EP---LQ--E--TD----------EVVFSDQSDMHSYVS 72 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~---~~--~--~~----------~~~~~~~~~~~~~~~ 72 (785)
+|.+...|..+.+.+|++|+|.|.+.+.+.+.+.|++.. .. +. . .. +........ ....
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~--~~~~ 79 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGST--RKNL 79 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC----CCC
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCC--CCeE
Confidence 678888899999999999999999998888899999832 11 00 0 00 111111111 1124
Q ss_pred EEEEcccCCCCCeEEEEEEEcCCe---eEEEEeeEEEeCCCCC-------------CCceecCCCceEeccCCcEEEEEE
Q psy2775 73 IVTIKSIKKREEGVYTVVAKNREG---EAKMDIPVKVNTGKPE-------------KPSILEPLHDVSITEGESAVLSVQ 136 (785)
Q Consensus 73 ~L~i~~~~~~D~G~Y~C~a~~~~~---~~~~~~~v~v~~~~~~-------------~p~i~~~~~~~~~~~G~~v~l~C~ 136 (785)
+|+|.+++.+|+|.|.|.+.+..+ .......|.|...... .|.+...+....+.+|++++|.|.
T Consensus 80 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~ 159 (259)
T 3omz_A 80 RMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCL 159 (259)
T ss_dssp EEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCE
T ss_pred EEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEE
Confidence 599999999999999999998765 3333455666542111 356777777889999999999999
Q ss_pred Eecc-CCCeEEEeECC--EEcc-------------cceEEE----eCCEEEEEEcccCCCCcEEEEEEEEcCC---ee--
Q psy2775 137 VGGE-PSPKVEWYKDG--KLIK-------------DRQITS----EKNTHTLTLIQCSTKDKGRYSVKVTNKE---GT-- 191 (785)
Q Consensus 137 ~~g~-p~~~v~W~~~g--~~~~-------------~~~~~~----~~~~~~L~i~~~~~~d~G~Y~C~a~n~~---g~-- 191 (785)
+.+. +.+.+.|+|.+ ..+. ...+.. .....+|+|.+++.+|+|.|.|.+.+.. +.
T Consensus 160 ~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~ 239 (259)
T 3omz_A 160 YETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGESLTRADKLI 239 (259)
T ss_dssp EECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESCSSTTCCCE
T ss_pred CCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCccCCCCceE
Confidence 8774 77899999843 1110 011111 1234569999999999999999998531 11
Q ss_pred EEEEEEEEeecC
Q psy2775 192 VESAANLNVDPY 203 (785)
Q Consensus 192 ~~~~~~l~V~~~ 203 (785)
.-....|.|...
T Consensus 240 fg~GT~l~v~~~ 251 (259)
T 3omz_A 240 FGKGTRVTVEPR 251 (259)
T ss_dssp ECCCEEEEEEC-
T ss_pred ECCCCEEEEeeC
Confidence 122366777644
No 314
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.72 E-value=2.4e-16 Score=156.14 Aligned_cols=183 Identities=19% Similarity=0.272 Sum_probs=118.2
Q ss_pred CCeEEecCCcEEEEEEEeC---CCceEEEEECC--EEc------------ccCCCEEEEEeCcEEEEEEccCCCCCcEEE
Q psy2775 423 QDVKVSRDEKASFEIELTK---GDALVKWYKDG--KEI------------AFSENVTLSIDGKKQKLIIFSAGLEDAGEY 485 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~~~------------~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 485 (785)
....+.+|++++|.|.+.+ +.+.+.|+|++ ... ....++.+...+....|+|.+++.+|+|.|
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (256)
T 3ux9_B 10 PSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADY 89 (256)
T ss_dssp SEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEE
Confidence 4577899999999999986 35679999842 111 123467776667778999999999999999
Q ss_pred EEEEeec-Cc---ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeE
Q psy2775 486 SCRVGDT-GD---KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLF 561 (785)
Q Consensus 486 ~C~a~n~-g~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~ 561 (785)
+|.|.|. +. ....+.|.|..++..... .+.+ .|... .....++.+
T Consensus 90 ~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~-~~~~----------------------~~~~~--------~~~~~~~~~ 138 (256)
T 3ux9_B 90 YCQVRDNNENEWVFGGGTKLTVLGSGGSTIT-SYNV----------------------YYTKL--------SSSGSEVQL 138 (256)
T ss_dssp EEEEEETTTTEEEECCCEEEEEC-----------------------------------------------------CCEE
T ss_pred EEEEEECCCCceEECCCEEEEEECCCCCcCc-ccee----------------------EEeec--------CCCccceeE
Confidence 9999985 32 234467787765421100 0000 00000 000001222
Q ss_pred eeeeeeeeeeecCeEEEEEEEecCC--CCceEEEeC--CEEe------cC-----------CCCeeEEee--CCeEEEEE
Q psy2775 562 IERFEEKTVKEKGTIRLMAKVKASP--APSIVWFRN--NKPL------LS-----------SPKKREIFD--GENIILEL 618 (785)
Q Consensus 562 ~~~~~~~~v~~g~~v~l~C~~~g~P--~p~v~W~~~--~~~i------~~-----------~~~~~~~~~--~~~~~L~i 618 (785)
.......+.+|++++|.|.+.|.| .+.+.|+|+ +..+ .. ..++.+..+ +..++|+|
T Consensus 139 -~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 217 (256)
T 3ux9_B 139 -VESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQM 217 (256)
T ss_dssp -EEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred -EcCCCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEE
Confidence 223345689999999999999987 679999996 3221 11 124444333 44678999
Q ss_pred ccCCCCCCceeEEEEEEcCC
Q psy2775 619 KEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 619 ~~~~~~~d~G~Y~C~a~n~~ 638 (785)
.+++. +|+|.|.|.|.|..
T Consensus 218 ~~v~~-~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 218 NSLRA-EDTAVYYCARYIDF 236 (256)
T ss_dssp CSCCG-GGCEEEEEEEEETT
T ss_pred CCCCh-hhCEEEEEEEEcCC
Confidence 99999 99999999999964
No 315
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.72 E-value=3.6e-17 Score=136.08 Aligned_cols=97 Identities=25% Similarity=0.421 Sum_probs=87.0
Q ss_pred cccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 7 ILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 7 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
-..+.||+|...|.++.+.+|++++|.|.+.|.|.+.|.|++++..|..+.++.+..++.. .+|+|.+++.+|+|.
T Consensus 8 ~~~~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~----~~L~I~~v~~~D~G~ 83 (107)
T 3knb_B 8 GDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAE----HGLLLTAALPTDAGV 83 (107)
T ss_dssp --CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTE----EEEEESSCCGGGCEE
T ss_pred CCCCCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCce----EEEEEecCChhhCEE
Confidence 3456799999999999999999999999999999999999999999998888877665543 469999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEe
Q psy2775 87 YTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
|+|.|.|..|.....+.|.|.
T Consensus 84 Y~C~a~N~~G~~~~~~~l~V~ 104 (107)
T 3knb_B 84 YVCRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEECCCEEEEEEEEEEE
Confidence 999999999999998889887
No 316
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.72 E-value=8.7e-17 Score=158.18 Aligned_cols=174 Identities=15% Similarity=0.207 Sum_probs=120.6
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEE--------------CCEEccCC----CCEEEeecCCccceEEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYY--------------NGEPLQET----DEVVFSDQSDMHSYVSI 73 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~ 73 (785)
.+.+...|..+.+.+|++++|.| ..+.+.+.+.|+| ++..+... .++.+..... ...+
T Consensus 2 ~~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~s 77 (245)
T 4ei6_B 2 GPKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDG---SYFT 77 (245)
T ss_dssp CCCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTT---SCEE
T ss_pred CcceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccC---ceEE
Confidence 46778889999999999999999 5677888999998 22211111 4555443221 1256
Q ss_pred EEEcccCCCCCeEEEEEEEcC----CeeEEEEeeEEEeCC--CCCCCcee-cCCCceEeccCCcEEEEEEEecc-CCC-e
Q psy2775 74 VTIKSIKKREEGVYTVVAKNR----EGEAKMDIPVKVNTG--KPEKPSIL-EPLHDVSITEGESAVLSVQVGGE-PSP-K 144 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~----~~~~~~~~~v~v~~~--~~~~p~i~-~~~~~~~~~~G~~v~l~C~~~g~-p~~-~ 144 (785)
|+|.+++.+|+|.|+|.+.+. .........|.|... ...+|.+. ..+....+..|+.+.|.|.+.|. |.+ .
T Consensus 78 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~ 157 (245)
T 4ei6_B 78 LKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVE 157 (245)
T ss_dssp EEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEE
T ss_pred EEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeE
Confidence 999999999999999999953 222333445666531 12345443 34444556679999999999884 444 8
Q ss_pred EEEeECCEEcccceEEE----------eCC----EEEEEEcccCCCC-cEEEEEEEEcCC
Q psy2775 145 VEWYKDGKLIKDRQITS----------EKN----THTLTLIQCSTKD-KGRYSVKVTNKE 189 (785)
Q Consensus 145 v~W~~~g~~~~~~~~~~----------~~~----~~~L~i~~~~~~d-~G~Y~C~a~n~~ 189 (785)
+.|++||..+....... .++ ...|.|.....+| .|.|+|.|.|..
T Consensus 158 v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~ 217 (245)
T 4ei6_B 158 LSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (245)
T ss_dssp EEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECC
T ss_pred EEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECC
Confidence 99999999987543211 122 2358888888888 999999999865
No 317
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.72 E-value=1.4e-17 Score=161.47 Aligned_cols=174 Identities=14% Similarity=0.146 Sum_probs=115.0
Q ss_pred CCeEEecCCcEEEEEEEeCC-Cc---eEEEEECCEEccc----------------CCCEEEE-------EeCcEEEEEEc
Q psy2775 423 QDVKVSRDEKASFEIELTKG-DA---LVKWYKDGKEIAF----------------SENVTLS-------IDGKKQKLIIF 475 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~-~~---~i~W~~~~~~~~~----------------~~~~~~~-------~~~~~~~L~i~ 475 (785)
.++.+..|++++|.|.+.++ .+ .|.|+|++..+.. ..+.... ......+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 35678899999999999873 33 4899997653311 0111111 11123579999
Q ss_pred cCCCCCcEEEEEEEeec-Cccee-EEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 476 SAGLEDAGEYSCRVGDT-GDKES-KATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~-g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
+++.+|+|.|+|.|.|. +.... ...+.+..+
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 121 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQ----------------------------------------------- 121 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC-----------------------------------------------
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeecC-----------------------------------------------
Confidence 99999999999999986 43332 333444433
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEE-ecCCCCceEEEeCCEEecCCCCeeEEeeCC----eEEEEEccCCCCCCce
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKV-KASPAPSIVWFRNNKPLLSSPKKREIFDGE----NIILELKEADSETDAG 628 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~-~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G 628 (785)
|.+...........++.+.+.|.+ .+.|++.+.|++++..+...... ....++ .+.|.|.++.. +|+|
T Consensus 122 -----~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~s~L~i~~~~~-~d~g 194 (225)
T 4fmk_A 122 -----PENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQE-PGIQAGTVTIISRYSLVPVGR-ADGV 194 (225)
T ss_dssp -----CEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEE-ECSSTTCEEEEEEEEECCCGG-GTTC
T ss_pred -----CceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcce-EEecCCCEEEEEEEEEeeCCH-HHCC
Confidence 222222334455667777777765 56788899999988665432211 111122 34699999998 9999
Q ss_pred eEEEEEEcCCcceEEEEEEEEE
Q psy2775 629 DYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 629 ~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.|+|.|+|..|....++.+.|.
T Consensus 195 ~YtC~a~N~~~~~~~~~~v~l~ 216 (225)
T 4fmk_A 195 KVTCRVEHESFEEPILLPVTLS 216 (225)
T ss_dssp EEEEEEECTTCSSCEEEEEECC
T ss_pred EEEEEEEcCCCCeEEEEEEEEE
Confidence 9999999999987766666654
No 318
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.72 E-value=1.1e-17 Score=162.81 Aligned_cols=180 Identities=11% Similarity=0.144 Sum_probs=117.9
Q ss_pred CCCeeeecCCceE-ecCCCeEEEEEEEEec---CCC-eeEEEECCEEccCCCC-EEEeecCCccceEEEEEEcccCCCCC
Q psy2775 11 IPPTFSKKTKPVY-AEENSEVTLEVRLVAV---PEP-DLLWYYNGEPLQETDE-VVFSDQSDMHSYVSIVTIKSIKKREE 84 (785)
Q Consensus 11 ~~p~~~~~~~~~~-v~~G~~v~l~C~~~g~---p~~-~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~ 84 (785)
.|..|..+|.... +.+|++++|.|.+.|. |.+ .|.|++++..+..... ......++.....+.|+|.+++.+|+
T Consensus 15 ~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~ 94 (239)
T 1i1c_A 15 VSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNG 94 (239)
T ss_dssp --CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred CCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCC
Confidence 4455566666555 8999999999999887 665 8999999876543211 01111223334456899999999999
Q ss_pred eEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC-CeEEEeECCEEcccceE---
Q psy2775 85 GVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS-PKVEWYKDGKLIKDRQI--- 159 (785)
Q Consensus 85 G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~-~~v~W~~~g~~~~~~~~--- 159 (785)
|.|+|.|.|..+.......+........+|.+...........|+.+.|.|.+.|. |+ ..|+|++||..+.....
T Consensus 95 g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~ 174 (239)
T 1i1c_A 95 KTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPP 174 (239)
T ss_dssp CCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCC
T ss_pred CeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCc
Confidence 99999999987743222122211123356766544333333458899999999884 44 48999999998864321
Q ss_pred -EEeCCE----EEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 160 -TSEKNT----HTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 160 -~~~~~~----~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
...++. ..|.|.....+|.|.|+|.|.|...
T Consensus 175 ~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 175 TMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp EECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred eECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 112222 2355555555689999999999863
No 319
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.72 E-value=9.6e-17 Score=157.82 Aligned_cols=174 Identities=16% Similarity=0.221 Sum_probs=119.2
Q ss_pred eeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EEc--------------cCCCCEEEeecCCccceEEEEEEc
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EPL--------------QETDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~~--------------~~~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
.+...|..+.+.+|++++|.|.+.+.+.+.+.|++.. ... ....++.+..+. ....+|+|.
T Consensus 3 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~~sL~I~ 79 (245)
T 3nfj_J 3 TIHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQ---DRQFILSSK 79 (245)
T ss_dssp EEEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEE---TTEEEEEES
T ss_pred eeeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecC---CCEEEEEEC
Confidence 4667888999999999999999998889999999932 110 011233333221 123569999
Q ss_pred ccCCCCCeEEEEEEEcCC-----e-eEEEEeeEEEeCC--CCCCCceec-CCCceEeccCCcEEEEEEEecc-CCC-eEE
Q psy2775 78 SIKKREEGVYTVVAKNRE-----G-EAKMDIPVKVNTG--KPEKPSILE-PLHDVSITEGESAVLSVQVGGE-PSP-KVE 146 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~-----~-~~~~~~~v~v~~~--~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~ 146 (785)
+++.+|+|.|+|.+.+.. . .......|.|... ...+|.+.. .+....+..|+.+.|.|.+.|. |++ .+.
T Consensus 80 ~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~ 159 (245)
T 3nfj_J 80 KLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELS 159 (245)
T ss_dssp SCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred CCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEE
Confidence 999999999999999822 1 2223345666531 223555543 3334445669999999999884 444 799
Q ss_pred EeECCEEcccceEEE----------eCC----EEEEEEcccCCCC-cEEEEEEEEcCCe
Q psy2775 147 WYKDGKLIKDRQITS----------EKN----THTLTLIQCSTKD-KGRYSVKVTNKEG 190 (785)
Q Consensus 147 W~~~g~~~~~~~~~~----------~~~----~~~L~i~~~~~~d-~G~Y~C~a~n~~g 190 (785)
|++||..+....... .++ ...|.|.....+| .|.|+|.|.|...
T Consensus 160 W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~ 218 (245)
T 3nfj_J 160 WWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp EEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred EEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCC
Confidence 999999987543211 122 2478888888888 7799999998754
No 320
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.72 E-value=6.3e-17 Score=161.51 Aligned_cols=176 Identities=15% Similarity=0.197 Sum_probs=120.7
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEEC--CEEc------------cCC----CCEEEeecCCccceEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYN--GEPL------------QET----DEVVFSDQSDMHSYVS 72 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~--~~~~------------~~~----~~~~~~~~~~~~~~~~ 72 (785)
..+.+...|..+.+.+|++++|.|.+. .+.+.+.|+|. +... ... .++.+..+.. ...
T Consensus 25 ~~~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~---~~~ 100 (268)
T 3pl6_D 25 GGAGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEG---SVS 100 (268)
T ss_dssp --SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTS---SSE
T ss_pred cCceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCC---CEE
Confidence 356778889999999999999999986 57789999982 2111 111 4555443211 125
Q ss_pred EEEEcccCCCCCeEEEEEEEcC--CeeEEEEeeEEEeCC--CCCCCcee-cCCCceEeccCCcEEEEEEEeccCCC--eE
Q psy2775 73 IVTIKSIKKREEGVYTVVAKNR--EGEAKMDIPVKVNTG--KPEKPSIL-EPLHDVSITEGESAVLSVQVGGEPSP--KV 145 (785)
Q Consensus 73 ~L~i~~~~~~D~G~Y~C~a~~~--~~~~~~~~~v~v~~~--~~~~p~i~-~~~~~~~~~~G~~v~l~C~~~g~p~~--~v 145 (785)
+|+|.+++.+|+|.|+|.+.+. .........|.|... ...+|.+. ..+....+..|+.++|.|.+.|.+++ .+
T Consensus 101 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v 180 (268)
T 3pl6_D 101 TLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 180 (268)
T ss_dssp EEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred EEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEE
Confidence 6999999999999999999973 333333445666531 12255544 33445556679999999999886554 89
Q ss_pred EEeECCEEcccceEEE----------eCC----EEEEEEcccCCCC-cEEEEEEEEcCCe
Q psy2775 146 EWYKDGKLIKDRQITS----------EKN----THTLTLIQCSTKD-KGRYSVKVTNKEG 190 (785)
Q Consensus 146 ~W~~~g~~~~~~~~~~----------~~~----~~~L~i~~~~~~d-~G~Y~C~a~n~~g 190 (785)
+|++||..+....... .++ ...|.|.....+| +|.|+|.|.|...
T Consensus 181 ~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 181 SWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 240 (268)
T ss_dssp EEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCC
Confidence 9999999886542211 111 2457888877777 9999999998753
No 321
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.72 E-value=4.8e-18 Score=163.47 Aligned_cols=176 Identities=16% Similarity=0.160 Sum_probs=109.7
Q ss_pred CCeEeeeeeeee--eeecCeEEEEEEEecC---CC-CceEEEeCCEEecCCCCeeE-EeeC----CeEEEEEccCCCCCC
Q psy2775 558 APLFIERFEEKT--VKEKGTIRLMAKVKAS---PA-PSIVWFRNNKPLLSSPKKRE-IFDG----ENIILELKEADSETD 626 (785)
Q Consensus 558 ~p~~~~~~~~~~--v~~g~~v~l~C~~~g~---P~-p~v~W~~~~~~i~~~~~~~~-~~~~----~~~~L~i~~~~~~~d 626 (785)
+|.+...+.... +.+|++++|.|.+.|. |+ +.|+|+|++..+........ ...+ ..+.|.|.+++. +|
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D 87 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW-MS 87 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHH-HT
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHc-CC
Confidence 355554444444 8899999999999987 44 69999999988754321111 1111 235799999999 99
Q ss_pred ceeEEEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEe
Q psy2775 627 AGDYKVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLV 706 (785)
Q Consensus 627 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~ 706 (785)
+|.|+|.|.|..+.......+... +.+..+|.+........ .
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~-------------------------------------~~~~~~P~v~~~~~~~~-~ 129 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKI-------------------------------------KGLVRAPQVYILPPPAE-Q 129 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCC-------------------------------------CCCCBCCEEEEECCCGG-G
T ss_pred CCeEEEEEECCcCCCcceEEEeec-------------------------------------CCCCCCCEEEEECCChH-H
Confidence 999999999998754222222110 01224455433222211 2
Q ss_pred ecCCeEEEEEEEec-CCCC-ceEEeECCEEeeecccccc--chhh-hcccccceeeee---eceEEEEEEeccc
Q psy2775 707 KKGEDLKIEVRFKA-LPPP-KAEWTVNGTVIVPSKRVKG--KAEF-IKKLDDLEVKER---ENAVLEVEVTSDK 772 (785)
Q Consensus 707 ~~g~~~~l~C~~~g-~P~p-~i~W~~~~~~~~~~~~~~~--~~~~-~~~l~~~~v~~~---~~~~~~c~~~~~~ 772 (785)
..|+.++|.|.+.| +|+| .|+|++||..+........ ..+- ........+... |.|.|+|.+.++.
T Consensus 130 ~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~ 203 (218)
T 2rgs_A 130 LSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEG 203 (218)
T ss_dssp TTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTT
T ss_pred hcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCC
Confidence 25999999999999 6776 9999999998854332211 1110 011111233333 4899999999744
No 322
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.72 E-value=1.6e-17 Score=158.43 Aligned_cols=179 Identities=18% Similarity=0.231 Sum_probs=111.6
Q ss_pred CCeeeecCCceE-ecCCCeEEEEEEEEecC----CCeeEEEECCEEccCCCC-EEEeecCCccceEEEEEEcccCCCCCe
Q psy2775 12 PPTFSKKTKPVY-AEENSEVTLEVRLVAVP----EPDLLWYYNGEPLQETDE-VVFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 12 ~p~~~~~~~~~~-v~~G~~v~l~C~~~g~p----~~~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
|..+..+|.... +.+|++++|.|.+.|.+ .+.|.|++++..+..... ......++.....+.|.|...+.+|+|
T Consensus 2 P~v~~~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g 81 (207)
T 1l6x_A 2 PSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK 81 (207)
T ss_dssp CEEEEECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTC
T ss_pred CeEEEeCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCc
Confidence 334444555444 38999999999998875 349999999987754311 111122222233345666666666799
Q ss_pred EEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CC-CeEEEeECCEEcccce---EE
Q psy2775 86 VYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS-PKVEWYKDGKLIKDRQ---IT 160 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~-~~v~W~~~g~~~~~~~---~~ 160 (785)
.|+|.|.|..+.......+.+......+|.+...........|..+.|.|.+.|. |+ +.|+|++||..+.... ..
T Consensus 82 ~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~ 161 (207)
T 1l6x_A 82 EYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPV 161 (207)
T ss_dssp CEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCE
T ss_pred eEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCce
Confidence 9999999987753222223211123356665543322222356679999999885 44 4999999999876432 11
Q ss_pred -EeCC----EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 161 -SEKN----THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 161 -~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
..++ ...|.|.....+|.|.|+|.|.|...
T Consensus 162 ~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 162 LDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp ECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 1122 12455666556789999999999763
No 323
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.71 E-value=1.1e-18 Score=170.38 Aligned_cols=175 Identities=11% Similarity=0.201 Sum_probs=98.1
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCE--Ee------------cCCCCeeEEeeCCeEEEEEccCCCC
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNK--PL------------LSSPKKREIFDGENIILELKEADSE 624 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~--~i------------~~~~~~~~~~~~~~~~L~i~~~~~~ 624 (785)
+.+...+....+.+|++++|.|.+.|.|.+.|.|+|++. .+ ....++.....++..+|.|.+++.
T Consensus 24 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~- 102 (233)
T 3bqu_C 24 TTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS- 102 (233)
T ss_dssp CCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C-
T ss_pred eeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH-
Confidence 555666778889999999999999999888999999532 11 012233333344556899999999
Q ss_pred CCceeEEEEEEcCCcceEE-EEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCc
Q psy2775 625 TDAGDYKVVATNELGSATH-GARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPE 703 (785)
Q Consensus 625 ~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~ 703 (785)
+|+|.|.|.|.|..+.... ...|.|.. ...+|.+....+..
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~--------------------------------------~~~~p~v~~~~~~~ 144 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKR--------------------------------------ADAAPTVSIFPPSS 144 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---C--------------------------------------CCBCCEEEEECCCH
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeC--------------------------------------CCCCCEEEEeCCCH
Confidence 9999999999998763322 22344431 11244443211111
Q ss_pred EEeecCCeEEEEEEEecC-CCC-ceEEeECCEEeeec-cc-cccc--h----hhhcccccceeeeeeceEEEEEEecccc
Q psy2775 704 VLVKKGEDLKIEVRFKAL-PPP-KAEWTVNGTVIVPS-KR-VKGK--A----EFIKKLDDLEVKERENAVLEVEVTSDKA 773 (785)
Q Consensus 704 ~~~~~g~~~~l~C~~~g~-P~p-~i~W~~~~~~~~~~-~~-~~~~--~----~~~~~l~~~~v~~~~~~~~~c~~~~~~~ 773 (785)
.+..|+.++|.|.+.|. |+| .|+|++||..+..+ .. .... . .....|.+..+...|.|.|+|.+.++..
T Consensus 145 -~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 145 -EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp -HHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred -HhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 13369999999999995 444 79999999988766 11 1111 1 1123466666666789999999998554
No 324
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.71 E-value=1.4e-16 Score=156.14 Aligned_cols=174 Identities=11% Similarity=0.196 Sum_probs=120.1
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--------------EEc---cCCCCEEEeecCCccceEEEEE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--------------EPL---QETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--------------~~~---~~~~~~~~~~~~~~~~~~~~L~ 75 (785)
+.+...|..+.+.+|++++|.|.+.+ +.+.+.|||.. ... ....++.+..... ...+|+
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~---~~~sL~ 78 (240)
T 3q5y_A 3 SGVVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDD---YHSEMN 78 (240)
T ss_dssp CCCEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTT---SCEEEE
T ss_pred cccccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCC---CEEEEE
Confidence 46777889999999999999999875 77899999821 111 1123554443221 125699
Q ss_pred EcccCCCCCeEEEEEEEc--CC-eeEEEEeeEEEeCC--CCCCCcee-cCCCceEeccCCcEEEEEEEec-cCCC-eEEE
Q psy2775 76 IKSIKKREEGVYTVVAKN--RE-GEAKMDIPVKVNTG--KPEKPSIL-EPLHDVSITEGESAVLSVQVGG-EPSP-KVEW 147 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~--~~-~~~~~~~~v~v~~~--~~~~p~i~-~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~W 147 (785)
|.+++.+|+|.|+|.+.+ .. ........|.|... ...+|.+. ..+....+..|+.+.|.|.+.| .|.+ .++|
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W 158 (240)
T 3q5y_A 79 MSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSW 158 (240)
T ss_dssp ECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred ECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEE
Confidence 999999999999999983 22 22233345666531 22455554 3444555667999999999988 5555 7999
Q ss_pred eECCEEcccceE------EEeCCE----EEEEEcccCCCC-cEEEEEEEEcCCe
Q psy2775 148 YKDGKLIKDRQI------TSEKNT----HTLTLIQCSTKD-KGRYSVKVTNKEG 190 (785)
Q Consensus 148 ~~~g~~~~~~~~------~~~~~~----~~L~i~~~~~~d-~G~Y~C~a~n~~g 190 (785)
++||..+..... ...++. +.|.|.....+| .|.|+|.|.|...
T Consensus 159 ~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 159 WVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 999999865422 122232 348899988888 7799999998653
No 325
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.71 E-value=2.5e-16 Score=156.31 Aligned_cols=188 Identities=18% Similarity=0.201 Sum_probs=121.8
Q ss_pred CcccccCCCeEEecCCcEEEEEEEeCC-------CceEEEEEC--CEEcc------------cCCCEEEEEeCcEEEEEE
Q psy2775 416 PEISVPLQDVKVSRDEKASFEIELTKG-------DALVKWYKD--GKEIA------------FSENVTLSIDGKKQKLII 474 (785)
Q Consensus 416 ~~~~~~~~~~~v~~g~~~~l~C~~~~~-------~~~i~W~~~--~~~~~------------~~~~~~~~~~~~~~~L~i 474 (785)
+.+...+..+.+.+|++++|.|.+.+. .+.+.|+|+ +..+. ...++.+..++....|+|
T Consensus 6 ~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I 85 (264)
T 2gjj_A 6 IVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTI 85 (264)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEE
Confidence 344455677789999999999999874 467999985 22111 135666666666789999
Q ss_pred ccCCCCCcEEEEEEEeec-Cc-ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCC
Q psy2775 475 FSAGLEDAGEYSCRVGDT-GD-KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPL 552 (785)
Q Consensus 475 ~~~~~~d~G~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 552 (785)
.+++.+|+|.|.|.|.|. +. ....+.|.|..++..-... ......
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~---------~~~~~~------------------------ 132 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGG---------GSGGGG------------------------ 132 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC----------------------------------------------
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccc---------cccccc------------------------
Confidence 999999999999999986 32 2334678887653100000 000000
Q ss_pred CCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCC--CceEEEeCC--E---Eec---C-----------CCCeeEEe--
Q psy2775 553 GSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPA--PSIVWFRNN--K---PLL---S-----------SPKKREIF-- 609 (785)
Q Consensus 553 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~--p~v~W~~~~--~---~i~---~-----------~~~~~~~~-- 609 (785)
.....++..+.......+.+|++++|.|.+.+.|. +.+.|||++ . .+. . ..++.+..
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~ 212 (264)
T 2gjj_A 133 SGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDT 212 (264)
T ss_dssp ------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEET
T ss_pred cccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcC
Confidence 00000011122222347899999999999999875 799999963 2 121 0 22333332
Q ss_pred eCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 610 DGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 610 ~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
.....+|+|.+++. +|+|.|.|.|.|.
T Consensus 213 ~~~~~~L~I~~v~~-~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 213 SSSTAFMQLNSLTS-EDSADYYCVRSGN 239 (264)
T ss_dssp TTTEEEEEECSCCG-GGCEEEEEEEECS
T ss_pred CCCEEEEEECcCCc-ccCEEEEEEEecC
Confidence 23567899999999 9999999999995
No 326
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.71 E-value=6.4e-16 Score=143.45 Aligned_cols=239 Identities=16% Similarity=0.271 Sum_probs=159.5
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEe-cC---CCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVA-VP---EPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g-~p---~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
++.++..|....+..|+.++|+|.+.| .| +..++|+|++..+.... ..|+|..+...|+|.|
T Consensus 2 ~~tVs~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGaT--------------~tLti~s~t~sdSG~Y 67 (304)
T 3shs_A 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNT--------------ATLTVADATSENAGSY 67 (304)
T ss_dssp CEEEEEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCCS--------------SEEEESSCCGGGCEEE
T ss_pred ccEEEeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCCc--------------ceEEeeeccccCCeEE
Confidence 345667788999999999999999854 46 45899999998865422 2389999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEeCCCCCCCcee-cCCCceEeccCCcEEEEEEE--ec-cC-----CCeEEEeECCEEcccce
Q psy2775 88 TVVAKNREGEAKMDIPVKVNTGKPEKPSIL-EPLHDVSITEGESAVLSVQV--GG-EP-----SPKVEWYKDGKLIKDRQ 158 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~-~~~~~~~~~~G~~v~l~C~~--~g-~p-----~~~v~W~~~g~~~~~~~ 158 (785)
+|++.+..+.......+.|... ..+.+. ..+....+..|..+.|.+.+ .| .| ..+++|++||..+...
T Consensus 68 qCvVTDa~Gcs~tSs~VtVT~~--a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA- 144 (304)
T 3shs_A 68 KVTVQDTDTMTSVESEVFLMEE--AELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT- 144 (304)
T ss_dssp EEEEEETTTCCEEECCCEEECB--CCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS-
T ss_pred EEEEEECCCCeeeeeeEEEecc--CceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc-
Confidence 9999998876655545555431 122232 23445556678899999987 43 44 4599999999877432
Q ss_pred EEEeCCEEEEEEcccCCCCcEEEEEEEEcCCee--EEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCC
Q psy2775 159 ITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGT--VESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKP 236 (785)
Q Consensus 159 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 236 (785)
..|++......++|.|+|.+.|..+. .+.++.+.+....
T Consensus 145 -------q~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~~-------------------------------- 185 (304)
T 3shs_A 145 -------QDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMN-------------------------------- 185 (304)
T ss_dssp -------SEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEEE--------------------------------
T ss_pred -------cccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEccc--------------------------------
Confidence 25788888899999999999998763 3334444443211
Q ss_pred eeeecCCcceeCCCCeEEEEEEEc--------cCCCC--eEEEEE--CCEEcc------------cceEEEeCCEEEEEE
Q psy2775 237 SILEPLHDVSITEGESAVLSVQVG--------GEPSP--KVEWYK--DGKLIK------------DRQITSEKNTHTLTL 292 (785)
Q Consensus 237 ~~~~~~~~~~~~~G~~~~l~C~~~--------g~p~~--~v~W~~--~~~~l~------------~~~~~~~~~~~~l~i 292 (785)
.-..-.....+..|+.+.|...+. |-|.. .+.||. .|+..+ ...+.. ...|.-
T Consensus 186 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 262 (304)
T 3shs_A 186 VDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITP---DGHLFK 262 (304)
T ss_dssp EEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECT---TSCEEE
T ss_pred cchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEEEEeecCccCchhhhhhhhhhhccceeCC---Ccceee
Confidence 001112234566788888877653 22322 467986 332211 111111 124667
Q ss_pred ccCCCCCCeEEEEEEEe
Q psy2775 293 IQCSTKDKGRYSVKVTN 309 (785)
Q Consensus 293 ~~~~~~d~G~Y~C~~~n 309 (785)
.....+|...|.|.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~ 279 (304)
T 3shs_A 263 ESATYDDTAKFWCVAKL 279 (304)
T ss_dssp SSCCGGGCEEEEEEEEE
T ss_pred cccccccchheeeHHHH
Confidence 78888999999999864
No 327
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.71 E-value=1.6e-16 Score=157.16 Aligned_cols=197 Identities=18% Similarity=0.238 Sum_probs=125.6
Q ss_pred ceecCCCceEeccCCcEEEEEEEeccCCCeEEEeECC--EEc---c-----------cceE----EEeCCEEEEEEcccC
Q psy2775 115 SILEPLHDVSITEGESAVLSVQVGGEPSPKVEWYKDG--KLI---K-----------DRQI----TSEKNTHTLTLIQCS 174 (785)
Q Consensus 115 ~i~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~g--~~~---~-----------~~~~----~~~~~~~~L~i~~~~ 174 (785)
.+...+..+.+.+|+.++|.|.+.+.|.+.+.|+|.. ..+ . ...+ .......+|+|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 4555667788999999999999998899999999832 111 0 0011 112456789999999
Q ss_pred CCCcEEEEEEEEcCCe----eEEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCC
Q psy2775 175 TKDKGRYSVKVTNKEG----TVESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEG 250 (785)
Q Consensus 175 ~~d~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G 250 (785)
.+|+|.|.|.|.|..+ .....+.|.|........ .... .-......+.+|.+...+....+.+|
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~-~~~~-----------~~~~~~~~~~~~~v~~~p~~~~v~~G 152 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSG-GGGS-----------GGGGSGGGGSEAAVTQSPRNKVTVTG 152 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------------------CCEEESCSEEEEETT
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcC-CCCc-----------CcccCCCCcCccEEEecCCEEEEeCC
Confidence 9999999999998754 222345677763100000 0000 00000001134567777777788899
Q ss_pred CeEEEEEEEccCCCCeEEEEECC--EEcc------------------cceEE-EeCCEEEEEEccCCCCCCeEEEEEEEe
Q psy2775 251 ESAVLSVQVGGEPSPKVEWYKDG--KLIK------------------DRQIT-SEKNTHTLTLIQCSTKDKGRYSVKVTN 309 (785)
Q Consensus 251 ~~~~l~C~~~g~p~~~v~W~~~~--~~l~------------------~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~~~n 309 (785)
+.++|.|.+.+. .+.+.|++.. ..+. ..... ......+|.|.+++.+|+|.|+|.|.|
T Consensus 153 ~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n 231 (256)
T 3tf7_C 153 ENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSD 231 (256)
T ss_dssp CCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEE
T ss_pred CcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecC
Confidence 999999999876 6799999832 1111 00000 123455899999999999999999999
Q ss_pred CCCceEEE--EEEEEec
Q psy2775 310 KEGTVESA--ANLNVDQ 324 (785)
Q Consensus 310 ~~g~~~~~--~~l~v~~ 324 (785)
..|..... ..|.|..
T Consensus 232 ~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 232 APGQLYFGEGSKLTVLE 248 (256)
T ss_dssp ETTEEEECCCEEEEEEC
T ss_pred CCCccEECCCeEEEEEc
Confidence 87654322 5666664
No 328
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.71 E-value=1.8e-16 Score=152.80 Aligned_cols=170 Identities=14% Similarity=0.178 Sum_probs=117.8
Q ss_pred CCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EE---cc--------------cCCCEEEEEe--CcEEEEEEccCC
Q psy2775 423 QDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KE---IA--------------FSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~---~~--------------~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
....+.+|++++|.|.+.+ + .+.+.|+|.. .. +. ...++.+..+ .....|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 87 (220)
T 2fbj_H 8 GGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVR 87 (220)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCC
T ss_pred CCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCC
Confidence 4577889999999999987 3 5679999852 11 10 1246666654 346789999999
Q ss_pred CCCcEEEEEEEeec-Cc---ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCC
Q psy2775 479 LEDAGEYSCRVGDT-GD---KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGS 554 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~-g~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 554 (785)
.+|+|.|.|.+.|. +. ....+.|.|...+.
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~---------------------------------------------- 121 (220)
T 2fbj_H 88 SEDTALYYCARLHYYGYNAYWGQGTLVTVSAESA---------------------------------------------- 121 (220)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSCC----------------------------------------------
T ss_pred hhhCEEEEEEEeccccccceecCCEEEEecCCCC----------------------------------------------
Confidence 99999999999986 32 22345777765311
Q ss_pred CCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CC--CceEEEeCCEEecCCCCeeEEeeCCe----EEEEEccCCCCCCc
Q psy2775 555 PGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PA--PSIVWFRNNKPLLSSPKKREIFDGEN----IILELKEADSETDA 627 (785)
Q Consensus 555 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~--p~v~W~~~~~~i~~~~~~~~~~~~~~----~~L~i~~~~~~~d~ 627 (785)
.+|.+.... ...+.+|+.++|.|.+.|. |. +.|.|++++..+...........++. +.|.|..... +|+
T Consensus 122 --~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d~ 197 (220)
T 2fbj_H 122 --RNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVEC-PEG 197 (220)
T ss_dssp --BCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGS-CTT
T ss_pred --CCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHc-CCC
Confidence 013333322 3346789999999999987 87 69999999876521000011112222 3589988887 899
Q ss_pred eeEEEEEEcCCcceE
Q psy2775 628 GDYKVVATNELGSAT 642 (785)
Q Consensus 628 G~Y~C~a~n~~g~~~ 642 (785)
|.|+|.|.|..|...
T Consensus 198 g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 198 ESVKCSVQHDSNPVQ 212 (220)
T ss_dssp CEEEEEEEETTSCCE
T ss_pred CeEEEEEEcCCCceE
Confidence 999999999999765
No 329
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.71 E-value=4.3e-17 Score=156.67 Aligned_cols=179 Identities=14% Similarity=0.175 Sum_probs=113.6
Q ss_pred eecCCceEecCCCeEEEEEEEEec--CCCeeEEEECCE--E---c-------------cCCCCEEEeecCCccceEEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNGE--P---L-------------QETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~~--~---~-------------~~~~~~~~~~~~~~~~~~~~L~ 75 (785)
+..|..+.+.+|++++|.|.+.+. +.+.+.||+... . + ....++.+.... ....|+
T Consensus 3 l~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~L~ 78 (215)
T 3nl4_H 3 VEESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTS----TTVDLK 78 (215)
T ss_dssp EEEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECS----SEEEEE
T ss_pred eEcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeC----CEEEEE
Confidence 345678999999999999999874 357899998431 1 1 012344443311 235699
Q ss_pred EcccCCCCCeEEEEEEEcCCee----EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCC--CeEEEeE
Q psy2775 76 IKSIKKREEGVYTVVAKNREGE----AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPS--PKVEWYK 149 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~~----~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~--~~v~W~~ 149 (785)
|.+++.+|+|.|.|.+.+..+. ......|.|....+.+|.+........+..|+.++|.|.+.+.++ ..+.|++
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~ 158 (215)
T 3nl4_H 79 ITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNS 158 (215)
T ss_dssp ESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEee
Confidence 9999999999999999987542 223345677644455677664333445668999999999988644 3688999
Q ss_pred CCEEcccce---EEEeCCEEEE-EEcccCCCCcEEEEEEEEcCCeeEEEEEEEE
Q psy2775 150 DGKLIKDRQ---ITSEKNTHTL-TLIQCSTKDKGRYSVKVTNKEGTVESAANLN 199 (785)
Q Consensus 150 ~g~~~~~~~---~~~~~~~~~L-~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 199 (785)
+|..+.... ....++...+ ....+...| |.|+|.|.|..+.......|.
T Consensus 159 ~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 159 GTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTVA 211 (215)
T ss_dssp GTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEECC
T ss_pred CCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEecC
Confidence 997554221 1111222221 114455667 999999999988666555443
No 330
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.71 E-value=1e-16 Score=154.74 Aligned_cols=175 Identities=14% Similarity=0.139 Sum_probs=118.7
Q ss_pred CCCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EE---c-c---------------cCCCEEEEEe--CcEEEEEEc
Q psy2775 422 LQDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KE---I-A---------------FSENVTLSID--GKKQKLIIF 475 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~---~-~---------------~~~~~~~~~~--~~~~~L~i~ 475 (785)
+....+.+|++++|.|.+.+ + .+.+.|+|++ .. + . ...++.+..+ .....|+|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 34567889999999999997 3 5789999853 11 1 0 0246666553 345689999
Q ss_pred cCCCCCcEEEEEEEeecC-cc-e--eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccC
Q psy2775 476 SAGLEDAGEYSCRVGDTG-DK-E--SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCP 551 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~g-~~-~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 551 (785)
+++.+|+|.|+|.+.|.+ .. . ..+.|.|...+.
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------- 123 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATT------------------------------------------- 123 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCC-------------------------------------------
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCC-------------------------------------------
Confidence 999999999999999863 21 1 346777764210
Q ss_pred CCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEec--CCCCeeE-EeeCCeEEEEEccCCCCCC
Q psy2775 552 LGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLL--SSPKKRE-IFDGENIILELKEADSETD 626 (785)
Q Consensus 552 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~--~~~~~~~-~~~~~~~~L~i~~~~~~~d 626 (785)
.+|.+........+.+|+.++|.|.+.|. |.| .|.|++++..+. ....... -.....+.|.|.++.. +|
T Consensus 124 -----~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~~ 197 (220)
T 1pz5_B 124 -----TAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTW-PS 197 (220)
T ss_dssp -----BCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGT-TT
T ss_pred -----CCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhc-CC
Confidence 01333332223346789999999999997 999 999999887410 0111100 0001235799999887 67
Q ss_pred ceeEEEEEEcCCcceEEEEE
Q psy2775 627 AGDYKVVATNELGSATHGAR 646 (785)
Q Consensus 627 ~G~Y~C~a~n~~g~~~~~~~ 646 (785)
|.|+|.|.|..|...+++.
T Consensus 198 -g~Y~C~a~n~~~~~~~~~~ 216 (220)
T 1pz5_B 198 -QTVICNVAHPASKVDLIKE 216 (220)
T ss_dssp -SCCEEEEEEGGGTEEEEEE
T ss_pred -ceEEEEEEECCccEeeeec
Confidence 9999999999998766544
No 331
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.71 E-value=7.7e-18 Score=162.80 Aligned_cols=179 Identities=19% Similarity=0.217 Sum_probs=121.8
Q ss_pred cCCceEecCCCeEEEEEEEEe-cCCCe----eEEEECCEEccC-------------CCCEEEeecCC-ccceEEEEEEcc
Q psy2775 18 KTKPVYAEENSEVTLEVRLVA-VPEPD----LLWYYNGEPLQE-------------TDEVVFSDQSD-MHSYVSIVTIKS 78 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g-~p~~~----i~W~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~L~i~~ 78 (785)
.|..+.+.+|++++|.|.+.+ .+.+. +.|++++..... ..+..+..+.- ......+|+|.+
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 466788999999999999844 44444 999998642211 23333332100 000124699999
Q ss_pred cCCCCCeEEEEEEEcCC-eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcE-EEEEEEe-ccCCCeEEEeECCEEcc
Q psy2775 79 IKKREEGVYTVVAKNRE-GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESA-VLSVQVG-GEPSPKVEWYKDGKLIK 155 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~-~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v-~l~C~~~-g~p~~~v~W~~~g~~~~ 155 (785)
++.+|+|.|+|.+.+.. +.....+.|.|. .+|.+........ ..|+.+ .|.|.+. |.|.+.|+|++++....
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~----~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~ 159 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVL----AKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMP 159 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCC----CCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCC
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEE----ECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCC
Confidence 99999999999999876 666666777776 3666654332222 678888 5999987 78999999998754432
Q ss_pred cceEE------EeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 156 DRQIT------SEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 156 ~~~~~------~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
..... .....+.|.|.++..+|+|.|+|.|.|..+.....+.|...
T Consensus 160 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~~~ 211 (221)
T 3eow_R 160 QTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVSLT 211 (221)
T ss_dssp CCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEECCC
T ss_pred ccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEEEE
Confidence 21110 01224679999999999999999999988765555544443
No 332
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.71 E-value=1.8e-16 Score=158.03 Aligned_cols=176 Identities=14% Similarity=0.163 Sum_probs=116.8
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecC-----CCeeEEEECC--EE---cc---------CCCCEEEeecCCccc
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVP-----EPDLLWYYNG--EP---LQ---------ETDEVVFSDQSDMHS 69 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p-----~~~i~W~~~~--~~---~~---------~~~~~~~~~~~~~~~ 69 (785)
....+.+...|..+.+.+|++++|.|.+.+.+ .+.+.|++++ .. +. ...++.+...+
T Consensus 12 ~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~---- 87 (268)
T 1x9q_A 12 KASDVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSG---- 87 (268)
T ss_dssp --CCCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEET----
T ss_pred ccccceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCC----
Confidence 34567888889999999999999999998876 4789999853 11 11 12344443211
Q ss_pred eEEEEEEcccCCCCCeEEEEEEEcCCeeE-EEEeeEEEeCCCC-----CCCc--------------eecCCCceEeccCC
Q psy2775 70 YVSIVTIKSIKKREEGVYTVVAKNREGEA-KMDIPVKVNTGKP-----EKPS--------------ILEPLHDVSITEGE 129 (785)
Q Consensus 70 ~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~-~~~~~v~v~~~~~-----~~p~--------------i~~~~~~~~~~~G~ 129 (785)
...+|+|.+++.+|+|.|.|.+.+..+.. .....|.|..... .+|. ....+....+.+|+
T Consensus 88 ~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~ 167 (268)
T 1x9q_A 88 TDFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGG 167 (268)
T ss_dssp TEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTC
T ss_pred CEEEEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCC
Confidence 12569999999999999999999875422 2233455543111 1121 22233467889999
Q ss_pred cEEEEEEEeccCC--CeEEEeEC--CEEcc--------------------cceEEE--e--CCEEEEEEcccCCCCcEEE
Q psy2775 130 SAVLSVQVGGEPS--PKVEWYKD--GKLIK--------------------DRQITS--E--KNTHTLTLIQCSTKDKGRY 181 (785)
Q Consensus 130 ~v~l~C~~~g~p~--~~v~W~~~--g~~~~--------------------~~~~~~--~--~~~~~L~i~~~~~~d~G~Y 181 (785)
.++|.|.+.+.+. +.+.|+++ +..+. ...+.. + ....+|.|.+++.+|+|.|
T Consensus 168 ~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 247 (268)
T 1x9q_A 168 AMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIY 247 (268)
T ss_dssp CEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred cEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEE
Confidence 9999999988653 78999984 22210 111111 1 2356899999999999999
Q ss_pred EEEEEcC
Q psy2775 182 SVKVTNK 188 (785)
Q Consensus 182 ~C~a~n~ 188 (785)
.|.|.+.
T Consensus 248 ~C~a~~~ 254 (268)
T 1x9q_A 248 YCTGASY 254 (268)
T ss_dssp EEEEEET
T ss_pred EEEEccC
Confidence 9999875
No 333
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.71 E-value=1.2e-16 Score=157.88 Aligned_cols=173 Identities=14% Similarity=0.169 Sum_probs=117.5
Q ss_pred eecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEc------c-----------CCCCEEEeecCCccceEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPL------Q-----------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~------~-----------~~~~~~~~~~~~~~~~~~~L 74 (785)
...|..+.+.+|++|+|.|.+.+.+ .+.+.|||+. ..+ . ...|+.+..+. ......|
T Consensus 10 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~--~~~~~sL 87 (261)
T 2xqy_G 10 LQQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDK--SSSTVYI 87 (261)
T ss_dssp EECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEG--GGTEEEE
T ss_pred EECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecC--CCCEEEE
Confidence 3446788999999999999998876 5789999863 211 0 02344443321 1123569
Q ss_pred EEcccCCCCCeEEEEEEEcCCe-e--EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEeE
Q psy2775 75 TIKSIKKREEGVYTVVAKNREG-E--AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYK 149 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~~-~--~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~~ 149 (785)
+|.+++.+|+|.|.|.+.+..+ . ......|.|....+.+|.+........+..|+.++|.|.+.+. |.+ .|.|++
T Consensus 88 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k 167 (261)
T 2xqy_G 88 QLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNS 167 (261)
T ss_dssp EECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGG
T ss_pred EEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEec
Confidence 9999999999999999998643 1 1123567776534455666543323346789999999999875 666 999999
Q ss_pred CCEEcccc---eEEEe---CCEEEEEEcccCCCCcEEEEEEEEcCCee
Q psy2775 150 DGKLIKDR---QITSE---KNTHTLTLIQCSTKDKGRYSVKVTNKEGT 191 (785)
Q Consensus 150 ~g~~~~~~---~~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 191 (785)
++..+... ..... ...+.|.|.....+| |.|+|.|.|....
T Consensus 168 ~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~ 214 (261)
T 2xqy_G 168 GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 214 (261)
T ss_dssp GTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGT
T ss_pred CCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCC
Confidence 98765321 11111 113578998888888 9999999997654
No 334
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.71 E-value=1.2e-16 Score=154.26 Aligned_cols=171 Identities=14% Similarity=0.247 Sum_probs=117.6
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECCE--E---c---c-------------CCCCEEEeecCCccceEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNGE--P---L---Q-------------ETDEVVFSDQSDMHSYVSI 73 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~~--~---~---~-------------~~~~~~~~~~~~~~~~~~~ 73 (785)
..|..+.+.+|++|+|.|.+.+.+ .+.+.||+... . + . ...++.+..+... ...+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~s 82 (221)
T 3m8o_H 5 VESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSK--NTAF 82 (221)
T ss_dssp EEESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGG--TEEE
T ss_pred EccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCC--CEEE
Confidence 456678899999999999998743 57899998431 1 0 0 1234444433211 2356
Q ss_pred EEEcccCCCCCeEEEEEEEcCC--eeEEEEeeEEEeCCCCCCCcee-cCCCceEeccCCcEEEEEEEec-cCC--CeEEE
Q psy2775 74 VTIKSIKKREEGVYTVVAKNRE--GEAKMDIPVKVNTGKPEKPSIL-EPLHDVSITEGESAVLSVQVGG-EPS--PKVEW 147 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~--~~~~~~~~v~v~~~~~~~p~i~-~~~~~~~~~~G~~v~l~C~~~g-~p~--~~v~W 147 (785)
|+|.+++.+|+|.|.|.+.+.. ........|.|......+|.+. ..+... .+|+.++|.|.+.+ .|. +.+.|
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W 160 (221)
T 3m8o_H 83 LQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTW 160 (221)
T ss_dssp EEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEE
T ss_pred EEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEE
Confidence 9999999999999999999864 1222334566754444566665 232222 78999999999987 665 48999
Q ss_pred eECCEEcccce---EE-EeCC----EEEEEEcccCCCCcEEEEEEEEcCCee
Q psy2775 148 YKDGKLIKDRQ---IT-SEKN----THTLTLIQCSTKDKGRYSVKVTNKEGT 191 (785)
Q Consensus 148 ~~~g~~~~~~~---~~-~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 191 (785)
+++|..+.... .. ..++ .+.|.|.....+|+|.|+|.|.|..+.
T Consensus 161 ~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~~ 212 (221)
T 3m8o_H 161 SESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNP 212 (221)
T ss_dssp SCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTSC
T ss_pred EECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCCC
Confidence 99997763211 11 1111 236899999999999999999998754
No 335
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.71 E-value=1.5e-16 Score=154.11 Aligned_cols=177 Identities=13% Similarity=0.125 Sum_probs=114.5
Q ss_pred CCCeEEecCCcEEEEEEEeCC---CceEEEEECC--EEc------c-----------cCCCEEEEEe--CcEEEEEEccC
Q psy2775 422 LQDVKVSRDEKASFEIELTKG---DALVKWYKDG--KEI------A-----------FSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~~~------~-----------~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
+....+.+|++++|.|.+.+. .+.+.|+|++ ..+ . ...++.+..+ .....|+|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (227)
T 1mju_H 7 PGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSL 86 (227)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCC
Confidence 345678899999999999873 5789999853 211 0 1346666554 35678999999
Q ss_pred CCCCcEEEEEEEeecCc--ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 478 GLEDAGEYSCRVGDTGD--KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~g~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
+.+|+|.|.|.+.|... ....+.|.|...+. .
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~----~------------------------------------------ 120 (227)
T 1mju_H 87 TSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKT----T------------------------------------------ 120 (227)
T ss_dssp CGGGCEEEEEEEEETTEEEECCCEEEEECSSCC----B------------------------------------------
T ss_pred CcccCEEEEEEECCCCceEEcCcEEEEEcCCCC----C------------------------------------------
Confidence 99999999999998521 12345677765210 0
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeC---CeEEEEEccCCCCCCceeE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDG---ENIILELKEADSETDAGDY 630 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~---~~~~L~i~~~~~~~d~G~Y 630 (785)
+|.+........+.+|+.++|.|.+.|. |.| .|.|+|++..+...........+ ..+.|.|..+.. +| |.|
T Consensus 121 --~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-g~Y 196 (227)
T 1mju_H 121 --APSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTW-PS-QSI 196 (227)
T ss_dssp --CCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTT-TT-SCC
T ss_pred --CCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhc-CC-CeE
Confidence 1333222112346789999999999986 877 99999998764211000111111 234799999887 78 999
Q ss_pred EEEEEcCCcceEEEEEEE
Q psy2775 631 KVVATNELGSATHGARVT 648 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~~l~ 648 (785)
+|.|.|..+.......+.
T Consensus 197 ~C~a~n~~~~~~~~~~~~ 214 (227)
T 1mju_H 197 TCNVAHPASSTKVDKKIE 214 (227)
T ss_dssp EEEEEEGGGTEEEEEECC
T ss_pred EEEEEECCCCcceEEEeC
Confidence 999999887765555444
No 336
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.70 E-value=1.2e-17 Score=161.57 Aligned_cols=173 Identities=14% Similarity=0.200 Sum_probs=117.3
Q ss_pred CCeEEecCCcEEEEEEEeC--CCc----eEEEEECCEEccc-------------CCCEEEEE-----eCcEEEEEEccCC
Q psy2775 423 QDVKVSRDEKASFEIELTK--GDA----LVKWYKDGKEIAF-------------SENVTLSI-----DGKKQKLIIFSAG 478 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~--~~~----~i~W~~~~~~~~~-------------~~~~~~~~-----~~~~~~L~i~~~~ 478 (785)
..+.+.+|++++|.|.+.+ +.+ .+.|++++..... ..+..+.. ......|.|.+++
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 86 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR 86 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSS
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCC
Confidence 4556779999999999965 333 3999998642211 33444443 1134589999999
Q ss_pred CCCcEEEEEEEeec--CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCC
Q psy2775 479 LEDAGEYSCRVGDT--GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPG 556 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~--g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~ 556 (785)
.+|+|.|+|.+.|. +.....+.|.|..+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~-------------------------------------------------- 116 (221)
T 3eow_R 87 VEDEGSYTCLFVTFPQGSRSVDIWLRVLAK-------------------------------------------------- 116 (221)
T ss_dssp CCCCSCBEEEEEESSSCSCEEECCCCCCCC--------------------------------------------------
T ss_pred hHHCeEEEEEEEeCCCCceEEEEEEEEEEC--------------------------------------------------
Confidence 99999999999984 55566666776654
Q ss_pred CCCeEeeeeeeeeeeecCeE-EEEEEEe-cCCCCceEEEeCCEEecCCCCeeEEee---CCeEEEEEccCCCCCCceeEE
Q psy2775 557 QAPLFIERFEEKTVKEKGTI-RLMAKVK-ASPAPSIVWFRNNKPLLSSPKKREIFD---GENIILELKEADSETDAGDYK 631 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v-~l~C~~~-g~P~p~v~W~~~~~~i~~~~~~~~~~~---~~~~~L~i~~~~~~~d~G~Y~ 631 (785)
|.+........ .+|+.+ .|.|.+. |+|.|.|+|+|++.............. ...+.|.|.++.. +|+|.|+
T Consensus 117 --P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~d~g~yt 192 (221)
T 3eow_R 117 --PQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQ-VDGKQVT 192 (221)
T ss_dssp --CEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSC-CCCCCEE
T ss_pred --CCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHH-HCCCeEE
Confidence 22222222222 678888 5999987 899999999997544322111000011 1246799999998 9999999
Q ss_pred EEEEcCCcceEEEEEEEE
Q psy2775 632 VVATNELGSATHGARVTV 649 (785)
Q Consensus 632 C~a~n~~g~~~~~~~l~V 649 (785)
|.|.|..+.......|..
T Consensus 193 C~a~n~~~~~~~~~~v~~ 210 (221)
T 3eow_R 193 CKVEHESFEKPQLLTVSL 210 (221)
T ss_dssp EEECCSCSSSCEEEEECC
T ss_pred EEEECCCCCCCeEEEEEE
Confidence 999999987665555443
No 337
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.70 E-value=2.3e-16 Score=157.29 Aligned_cols=191 Identities=15% Similarity=0.187 Sum_probs=118.9
Q ss_pred CcccccCCCeEEecCCcEEEEEEEeCC------CceEEEEECC--EE---cc---------cCCCEEEEEeCcEEEEEEc
Q psy2775 416 PEISVPLQDVKVSRDEKASFEIELTKG------DALVKWYKDG--KE---IA---------FSENVTLSIDGKKQKLIIF 475 (785)
Q Consensus 416 ~~~~~~~~~~~v~~g~~~~l~C~~~~~------~~~i~W~~~~--~~---~~---------~~~~~~~~~~~~~~~L~i~ 475 (785)
+.+...+..+.+.+|++++|.|.+.+. .+.+.|+|+. .. +. ...++.+...+....|+|.
T Consensus 16 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 95 (268)
T 1x9q_A 16 VVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKIN 95 (268)
T ss_dssp CCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEES
T ss_pred ceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEEC
Confidence 344445566778899999999999874 3789999853 21 11 1356666666667899999
Q ss_pred cCCCCCcEEEEEEEeec-Cc-ceeEEEEEEEcCcccccc-cCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCC
Q psy2775 476 SAGLEDAGEYSCRVGDT-GD-KESKATLTVEAPAVEFLT-KLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPL 552 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~-g~-~~~~~~l~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 552 (785)
+++.+|+|.|.|.|.|. +. ......|.|..++..... ..|..... +..+.
T Consensus 96 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~-----------~~~~~---------------- 148 (268)
T 1x9q_A 96 RVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAK-----------KDDAK---------------- 148 (268)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEC---------------------------------------------------
T ss_pred CCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCcccccccccc-----------ccccc----------------
Confidence 99999999999999986 32 233466777654311000 00000000 00000
Q ss_pred CCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCC--CceEEEeCC--EEe---c----------------CCCCeeEEe
Q psy2775 553 GSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPA--PSIVWFRNN--KPL---L----------------SSPKKREIF 609 (785)
Q Consensus 553 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~--p~v~W~~~~--~~i---~----------------~~~~~~~~~ 609 (785)
.....++..+....+.+|++++|.|.+.|.|+ +.+.|||++ ..+ . ...++....
T Consensus 149 ---~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~ 225 (268)
T 1x9q_A 149 ---KDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISR 225 (268)
T ss_dssp ---CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEE
T ss_pred ---cccceEEECCCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEE
Confidence 00001233344668999999999999999874 789999852 221 0 123333333
Q ss_pred e--CCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 610 D--GENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 610 ~--~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
+ ....+|+|.+++. +|+|.|.|.|.|.
T Consensus 226 ~~~~~~~~L~I~~v~~-~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 226 DDSKSSVYLQMNNLRV-EDTGIYYCTGASY 254 (268)
T ss_dssp EGGGTEEEEEECSCCG-GGCEEEEEEEEET
T ss_pred eCCCCEEEEEECCCCH-HHCEEEEEEEccC
Confidence 2 2357899999999 9999999999985
No 338
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.70 E-value=1.6e-16 Score=156.67 Aligned_cols=182 Identities=11% Similarity=0.139 Sum_probs=120.8
Q ss_pred ecCCceEecCCCeEEEEEEEEec--CCCeeEEEECCE-----Ec--------------cCCCCEEEeecCCccceEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNGE-----PL--------------QETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~~-----~~--------------~~~~~~~~~~~~~~~~~~~~L~ 75 (785)
..|..+.+.+|++++|.|.+.+. +...+.||+... .+ ...+|+.+..+.. ....+|+
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~ 82 (253)
T 3liz_H 5 VESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNA--KNTLFLQ 82 (253)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGG--GTEEEEE
T ss_pred EcCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCC--CCEEEEE
Confidence 34668999999999999999773 356899998431 11 0113444433221 1235699
Q ss_pred EcccCCCCCeEEEEEEEcCC----eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cCCC-eEEEeE
Q psy2775 76 IKSIKKREEGVYTVVAKNRE----GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP-KVEWYK 149 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~----~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p~~-~v~W~~ 149 (785)
|.+++.+|+|.|.|.+.+.. ........|.|......+|.+........+..|+.+.|.|.+.| .|.+ .+.|++
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 162 (253)
T 3liz_H 83 MSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNS 162 (253)
T ss_dssp ECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEe
Confidence 99999999999999998752 22233456777644456677764444445667999999999987 6656 899999
Q ss_pred CCEEcccce---EEEe---CCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 150 DGKLIKDRQ---ITSE---KNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 150 ~g~~~~~~~---~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
+|..+.... .... ...+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 163 ~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 163 GSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp GTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred CCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecCc
Confidence 987432110 1111 112578999999999 99999999998876665555543
No 339
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.70 E-value=2e-16 Score=154.92 Aligned_cols=178 Identities=13% Similarity=0.126 Sum_probs=120.7
Q ss_pred cccccCCCeEEecCCcEEEEEEEeCCCceEEEEEC--------------CEEcc---cCCCEEEEEe-CcEEEEEEccCC
Q psy2775 417 EISVPLQDVKVSRDEKASFEIELTKGDALVKWYKD--------------GKEIA---FSENVTLSID-GKKQKLIIFSAG 478 (785)
Q Consensus 417 ~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~--------------~~~~~---~~~~~~~~~~-~~~~~L~i~~~~ 478 (785)
.+..++..+.+.+|++++|.|.+.++.+.+.|+|. +.... ...++.+..+ .....|+|.+++
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 83 (240)
T 3q5y_A 4 GVVQSPRHIIKEKGGRSVLTCIPISGHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALE 83 (240)
T ss_dssp CCEEECSEEEEETTCCEEEEEECCTTCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCC
T ss_pred ccccCcceeeecCCCcEEEEEEeCCCCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCC
Confidence 34455667889999999999999888889999982 22111 1245665543 346789999999
Q ss_pred CCCcEEEEEEEeec----CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCC
Q psy2775 479 LEDAGEYSCRVGDT----GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGS 554 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~----g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 554 (785)
.+|+|.|+|.|.+. ........|.|......
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~--------------------------------------------- 118 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRN--------------------------------------------- 118 (240)
T ss_dssp GGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGG---------------------------------------------
T ss_pred hhHCEEEEEEEccCCCcceEEcCCEEEEEeccccC---------------------------------------------
Confidence 99999999999832 22334456777642100
Q ss_pred CCCCCeEe-eeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecCCCCee---EEeeCCe----EEEEEccCCCC
Q psy2775 555 PGQAPLFI-ERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLSSPKKR---EIFDGEN----IILELKEADSE 624 (785)
Q Consensus 555 ~~~~p~~~-~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~~~~~~---~~~~~~~----~~L~i~~~~~~ 624 (785)
..+|.+. ..+....+.+|+.++|.|.+.| .|.| .|.|+|+|..+..+.... ....++. +.|.|.....
T Consensus 119 -~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~- 196 (240)
T 3q5y_A 119 -VTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFW- 196 (240)
T ss_dssp -CBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHH-
T ss_pred -CCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHh-
Confidence 0013322 2233445677999999999999 5766 799999999986543221 1222333 2489998887
Q ss_pred CC-ceeEEEEEEcCCcce
Q psy2775 625 TD-AGDYKVVATNELGSA 641 (785)
Q Consensus 625 ~d-~G~Y~C~a~n~~g~~ 641 (785)
+| .|.|+|.|.|.....
T Consensus 197 ~d~~g~YtC~v~~~~~~~ 214 (240)
T 3q5y_A 197 HNPRNHFRCQVQFHGLSE 214 (240)
T ss_dssp SCTTCEEEEEEEECCBCT
T ss_pred ccCCCEEEEEEEcCCCCC
Confidence 77 679999999986543
No 340
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.70 E-value=1.4e-16 Score=154.12 Aligned_cols=170 Identities=14% Similarity=0.156 Sum_probs=114.8
Q ss_pred CCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EEcc-----------------cCCCEEEEEe--CcEEEEEEccCC
Q psy2775 423 QDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KEIA-----------------FSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
....+.+|++++|.|.+.+ + .+.+.|+|.. ..+. ...++.+..+ .....|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (225)
T 1op3_H 8 GGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMR 87 (225)
T ss_dssp CCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCC
Confidence 4567889999999999987 3 5789999853 2110 1346666654 346789999999
Q ss_pred CCCcEEEEEEEeec-C-----c---ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccc
Q psy2775 479 LEDAGEYSCRVGDT-G-----D---KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPT 549 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~-g-----~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 549 (785)
.+|+|.|.|.+.|. | . ....+.|.|...+. .
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~----~------------------------------------ 127 (225)
T 1op3_H 88 VEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAST----K------------------------------------ 127 (225)
T ss_dssp GGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSC----B------------------------------------
T ss_pred hhhCEEEEEEEecCCCccccccceeecCCEEEecccCCC----c------------------------------------
Confidence 99999999999986 3 1 11345777775210 0
Q ss_pred cCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeCC----eEEEEEccCCC
Q psy2775 550 CPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDGE----NIILELKEADS 623 (785)
Q Consensus 550 ~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~~----~~~L~i~~~~~ 623 (785)
+|.+........+.+|+.++|.|.+.|. |.| .|.|+|++..+...........++ .+.|.|..+..
T Consensus 128 --------~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 199 (225)
T 1op3_H 128 --------GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL 199 (225)
T ss_dssp --------CCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGT
T ss_pred --------CCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhc
Confidence 1322221111235689999999999987 877 999999987642110001111222 24689999887
Q ss_pred CCCceeEEEEEEcCCcceE
Q psy2775 624 ETDAGDYKVVATNELGSAT 642 (785)
Q Consensus 624 ~~d~G~Y~C~a~n~~g~~~ 642 (785)
+| |.|+|.|.|..+...
T Consensus 200 -~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 200 -GT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp -TC-CCCCEEEEEGGGTEE
T ss_pred -CC-CcEEEEEEcCCCCcc
Confidence 78 999999999877544
No 341
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.70 E-value=1.9e-15 Score=140.66 Aligned_cols=157 Identities=16% Similarity=0.164 Sum_probs=116.4
Q ss_pred ceEeccCCcEEEEEEEeccCCC--eEEEeECCEEcccceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEE
Q psy2775 122 DVSITEGESAVLSVQVGGEPSP--KVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLN 199 (785)
Q Consensus 122 ~~~~~~G~~v~l~C~~~g~p~~--~v~W~~~g~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 199 (785)
.+.+..|+++.|.|.+ +.|.+ .|+|++.+..+ ...........|.|.+++.+|.|.|.|.|.|..+.....+.|+
T Consensus 16 ~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l--~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~lt 92 (210)
T 1gsm_A 16 VVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL--GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLL 92 (210)
T ss_dssp EEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT--CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred ceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc--CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEE
Confidence 3688899999999999 88877 99999965444 2333346677899999999999999999999999888889999
Q ss_pred eecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEccC-CC----CeEEEEECCE
Q psy2775 200 VDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS----PKVEWYKDGK 274 (785)
Q Consensus 200 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g~-p~----~~v~W~~~~~ 274 (785)
|...| ....... ..+.+|+.. |.|.+.+. |. ++|+|+|++.
T Consensus 93 V~~~P--------------------------------~~~~i~~-~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~ 138 (210)
T 1gsm_A 93 VYAFP--------------------------------NQLTVSP-AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQ 138 (210)
T ss_dssp EEBCC--------------------------------SEEEEES-SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTE
T ss_pred EEecC--------------------------------CCcEEcc-ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCE
Confidence 98442 2222111 256678888 99999875 64 3899999999
Q ss_pred EcccceE----E-E--------eCC----EEEEEEccCCCCCCeEEEEEEEeCCCceE
Q psy2775 275 LIKDRQI----T-S--------EKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVE 315 (785)
Q Consensus 275 ~l~~~~~----~-~--------~~~----~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 315 (785)
.|..... . . ... .++|.+.....+|.+.|+|.|.+..-...
T Consensus 139 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~ 196 (210)
T 1gsm_A 139 ELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLE 196 (210)
T ss_dssp ECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEE
T ss_pred EcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCc
Confidence 9963322 1 0 011 23455567777888999999998754443
No 342
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.70 E-value=3.2e-16 Score=157.98 Aligned_cols=191 Identities=13% Similarity=0.162 Sum_probs=122.8
Q ss_pred CCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EEc-----------------ccCCCEEEEEe--CcEEEEEEccCC
Q psy2775 423 QDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KEI-----------------AFSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
....+.+|++++|.|.+.+ + .+.+.|+|+. ..+ ....++.+..+ +....|+|.+++
T Consensus 30 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 109 (291)
T 2gki_A 30 GPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLT 109 (291)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCC
T ss_pred CcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCC
Confidence 3567889999999999987 3 4689999953 111 01245555443 346789999999
Q ss_pred CCCcEEEEEEEeecC--cce----eEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCC
Q psy2775 479 LEDAGEYSCRVGDTG--DKE----SKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPL 552 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~g--~~~----~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 552 (785)
.+|+|.|.|.+.|.. ... ..+.|.|..+.. .........
T Consensus 110 ~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~-~~~~~~~~~---------------------------------- 154 (291)
T 2gki_A 110 SEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGG-GGSGGGGSG---------------------------------- 154 (291)
T ss_dssp GGGCEEEEEEEECGGGTTCEEEECCCEEEEECC-----------------------------------------------
T ss_pred HHHCEEEEEEEeccccccccceeCCCcEEEEecCCc-cccccccCC----------------------------------
Confidence 999999999999852 111 234666654100 000000000
Q ss_pred CCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCC------ceEEEeCC--EE---ec---------CCCCeeEEeeCC
Q psy2775 553 GSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAP------SIVWFRNN--KP---LL---------SSPKKREIFDGE 612 (785)
Q Consensus 553 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p------~v~W~~~~--~~---i~---------~~~~~~~~~~~~ 612 (785)
....++.+...+....+.+|++++|.|.+.|.|.+ .+.|||++ .. +. ...++.....+.
T Consensus 155 -~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~ 233 (291)
T 2gki_A 155 -GGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGT 233 (291)
T ss_dssp -----CCCEECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETT
T ss_pred -CCCccceEEcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCC
Confidence 00001334444556789999999999999999876 89999963 21 11 023444444566
Q ss_pred eEEEEEccCCCCCCceeEEEEEEcCCcceEEE-EEEEEE
Q psy2775 613 NIILELKEADSETDAGDYKVVATNELGSATHG-ARVTVD 650 (785)
Q Consensus 613 ~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~ 650 (785)
.++|+|.+++. +|+|.|+|.|.|.....-.. ..|.|+
T Consensus 234 ~~~L~I~~v~~-~DsG~Y~C~a~~~~~~~fg~gt~l~v~ 271 (291)
T 2gki_A 234 DFTLTISSVQA-EDLAVYYCKQSYYHMYTFGSGTKLEIK 271 (291)
T ss_dssp EEEEEESSCCG-GGCEEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEECCCCH-HHCEEEEEEEccCCceEEcCCEEEEEE
Confidence 77899999999 99999999999965433322 345554
No 343
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.70 E-value=5.4e-18 Score=161.69 Aligned_cols=174 Identities=16% Similarity=0.215 Sum_probs=108.0
Q ss_pred eEeeeeeeee-eeecCeEEEEEEEecCC---C-CceEEEeCCEEecCCCC-eeEEeeC----CeEEEEEccCCCCCCcee
Q psy2775 560 LFIERFEEKT-VKEKGTIRLMAKVKASP---A-PSIVWFRNNKPLLSSPK-KREIFDG----ENIILELKEADSETDAGD 629 (785)
Q Consensus 560 ~~~~~~~~~~-v~~g~~v~l~C~~~g~P---~-p~v~W~~~~~~i~~~~~-~~~~~~~----~~~~L~i~~~~~~~d~G~ 629 (785)
.++..+.... +.+|++++|.|.+.|.| . +.|.|+|++..+..... ....+.+ ....|.|.+++. +|+|.
T Consensus 4 v~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~ 82 (207)
T 2vol_A 4 VFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDW-LNGKE 82 (207)
T ss_dssp EEEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHH-HTTCC
T ss_pred EEEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHc-CCCCE
Confidence 3444444444 89999999999999985 3 38999999987753210 0001111 235799999999 99999
Q ss_pred EEEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecC
Q psy2775 630 YKVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKG 709 (785)
Q Consensus 630 Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g 709 (785)
|+|.|.|..|....+..+.+. ..+..+|.+........ ...|
T Consensus 83 Y~C~a~~~~~~~~~~~~v~~~-------------------------------------~~~~~~P~v~~~~~~~~-~~~g 124 (207)
T 2vol_A 83 FKCRVNSAAFPAPIEKTISKT-------------------------------------KGRPKAPQVYTLPPPKE-QMAK 124 (207)
T ss_dssp EEEEEECTTCSSCEEEEECCC-------------------------------------CCCCBCCEEEEECCCTG-GGSS
T ss_pred EEEEEEccCCCCceEEEeccC-------------------------------------CCCCcCCeEEEeCCCHH-HhcC
Confidence 999999998864322222210 01224455432222111 2359
Q ss_pred CeEEEEEEEecC-CCC-ceEEeECCEEeeecccccc--chh--h--hcccccceeeeeeceEEEEEEeccc
Q psy2775 710 EDLKIEVRFKAL-PPP-KAEWTVNGTVIVPSKRVKG--KAE--F--IKKLDDLEVKERENAVLEVEVTSDK 772 (785)
Q Consensus 710 ~~~~l~C~~~g~-P~p-~i~W~~~~~~~~~~~~~~~--~~~--~--~~~l~~~~v~~~~~~~~~c~~~~~~ 772 (785)
+.++|.|.+.|+ |++ .|+|++||..+........ ..+ | ...|.+......+.|.|+|.+.++.
T Consensus 125 ~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~ 195 (207)
T 2vol_A 125 DKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEG 195 (207)
T ss_dssp SEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTT
T ss_pred CceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCC
Confidence 999999999995 553 8999999998865432211 111 1 1122222222235899999999854
No 344
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.7e-16 Score=152.57 Aligned_cols=181 Identities=14% Similarity=0.173 Sum_probs=131.1
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEECCEEcccC--CCEEEEEeCcEEEEEEccCCCCCcEEEEEEEe
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKDGKEIAFS--ENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVG 490 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 490 (785)
.+|.+. .+....+.+|+.+.|.|.+.+ |.+.+.|+|+|..+... .++.+...+....|.|.++..+|+|.|+|.|.
T Consensus 18 ~~P~~~-~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKLQ-GPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEEE-CCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCccc-CCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 356663 455678899999999999998 78899999999998766 46677766677899999999999999999999
Q ss_pred ec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeeeee
Q psy2775 491 DT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKT 569 (785)
Q Consensus 491 n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 569 (785)
|. |.....+.|.|..+|.. |.... .
T Consensus 97 n~~g~~~~~~~l~v~~~P~~-------------------------------------------------p~~~~-----~ 122 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTPSS-------------------------------------------------PSIDQ-----V 122 (215)
T ss_dssp CSSCEEEEEEEEEECCCCCC-------------------------------------------------CEEEE-----E
T ss_pred ECCCceEEEEEEEECCCCCC-------------------------------------------------CcceE-----E
Confidence 98 88888888888765421 11111 1
Q ss_pred eeecCeEEEEEEE----ecCCCC--ceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEE
Q psy2775 570 VKEKGTIRLMAKV----KASPAP--SIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATH 643 (785)
Q Consensus 570 v~~g~~v~l~C~~----~g~P~p--~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 643 (785)
...+..++|.|.. .|.|.+ .+.|.+++...................|.|.++.. .|.|.|+|.|.|..|....
T Consensus 123 ~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~-~~~y~~~~~A~N~~G~s~~ 201 (215)
T 3mtr_A 123 EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKP-ETTYAVRLAALNGKGLGEI 201 (215)
T ss_dssp EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCT-TCEEEEEEEEEESSCBCCC
T ss_pred EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCC-CCEEEEEEEEEeCCcccCc
Confidence 2345678888873 233444 47888877542111000000011125799999999 9999999999999998887
Q ss_pred EEEEEEE
Q psy2775 644 GARVTVD 650 (785)
Q Consensus 644 ~~~l~V~ 650 (785)
+..+.|.
T Consensus 202 S~~~~v~ 208 (215)
T 3mtr_A 202 SAASEFK 208 (215)
T ss_dssp CCCEEEE
T ss_pred ccceeeE
Confidence 7777765
No 345
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.69 E-value=2.9e-16 Score=152.29 Aligned_cols=174 Identities=16% Similarity=0.163 Sum_probs=114.4
Q ss_pred CCeEEecCCcEEEEEEEeCCC-----ceEEEEEC--CEEcc----------------cCCCEEEEEeC--cEEEEEEccC
Q psy2775 423 QDVKVSRDEKASFEIELTKGD-----ALVKWYKD--GKEIA----------------FSENVTLSIDG--KKQKLIIFSA 477 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~~-----~~i~W~~~--~~~~~----------------~~~~~~~~~~~--~~~~L~i~~~ 477 (785)
....+.+|++++|.|.+.+.+ +.+.|+|. +..+. ...++.+..+. ....|.|.++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 87 (228)
T 3bae_H 8 GPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSV 87 (228)
T ss_dssp CCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSC
T ss_pred CceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCC
Confidence 456788999999999999732 78999984 22110 12456655542 3578999999
Q ss_pred CCCCcEEEEEEEeec-C------c---ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccc
Q psy2775 478 GLEDAGEYSCRVGDT-G------D---KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIV 547 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~-g------~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 547 (785)
+.+|+|.|.|.+.|. | . ....+.|.|...+.
T Consensus 88 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~--------------------------------------- 128 (228)
T 3bae_H 88 DTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKT--------------------------------------- 128 (228)
T ss_dssp CGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCC---------------------------------------
T ss_pred CcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCC---------------------------------------
Confidence 999999999999986 3 1 11236677763210
Q ss_pred cccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeC---CeEEEEEccCC
Q psy2775 548 PTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDG---ENIILELKEAD 622 (785)
Q Consensus 548 ~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~---~~~~L~i~~~~ 622 (785)
.+|.+........+.+|+.++|.|.+.|. |.| .|.|++++..+.......+...+ ....|.|..+.
T Consensus 129 ---------~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~ 199 (228)
T 3bae_H 129 ---------TAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSST 199 (228)
T ss_dssp ---------BCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTT
T ss_pred ---------CCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhh
Confidence 01333322222346789999999999987 888 99999998754211111111111 13468999887
Q ss_pred CCCCceeEEEEEEcCCcceEEEEE
Q psy2775 623 SETDAGDYKVVATNELGSATHGAR 646 (785)
Q Consensus 623 ~~~d~G~Y~C~a~n~~g~~~~~~~ 646 (785)
. +| |.|+|.|.|..|.......
T Consensus 200 ~-d~-g~YtC~~~n~~~~~~~~~~ 221 (228)
T 3bae_H 200 W-PS-ESITCNVAHPASSTKVDKK 221 (228)
T ss_dssp T-TT-SCCEEEEEEGGGTEEEEEE
T ss_pred c-CC-CcEEEEEEECCCCCCEEEE
Confidence 7 66 9999999999997765444
No 346
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.69 E-value=7.6e-17 Score=158.55 Aligned_cols=175 Identities=15% Similarity=0.172 Sum_probs=112.6
Q ss_pred EeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCC--EEe--------------cCCCCeeEEe-eCCeEEEEEccCCC
Q psy2775 561 FIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--KPL--------------LSSPKKREIF-DGENIILELKEADS 623 (785)
Q Consensus 561 ~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~~i--------------~~~~~~~~~~-~~~~~~L~i~~~~~ 623 (785)
+...+..+.+.+|++++|.|.+.+.|.+.|.|||.+ ... ....++.... ....++|.|.+++.
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 445556788999999999999999999999999922 110 0113343333 34577899999999
Q ss_pred CCCceeEEEEEEcCCc------ceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcC
Q psy2775 624 ETDAGDYKVVATNELG------SATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVID 697 (785)
Q Consensus 624 ~~d~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~ 697 (785)
+|+|.|.|.|.|..| .....+.|.|... +....+|.+.
T Consensus 84 -~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~-----------------------------------~~~~~~P~v~ 127 (245)
T 3nfj_J 84 -SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVED-----------------------------------LNKVFPPEVA 127 (245)
T ss_dssp -GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESC-----------------------------------GGGCBCCEEE
T ss_pred -hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcc-----------------------------------cCCCCCCceE
Confidence 999999999999433 2223345555410 0011344443
Q ss_pred CCCCCcEEeecCCeEEEEEEEecC-CCC-ceEEeECCEEeeeccccccc------------hhhhcccccceeeeee-ce
Q psy2775 698 PPPPPEVLVKKGEDLKIEVRFKAL-PPP-KAEWTVNGTVIVPSKRVKGK------------AEFIKKLDDLEVKERE-NA 762 (785)
Q Consensus 698 ~~~~~~~~~~~g~~~~l~C~~~g~-P~p-~i~W~~~~~~~~~~~~~~~~------------~~~~~~l~~~~v~~~~-~~ 762 (785)
...+....+..|+.++|.|.+.|. |++ .+.|++||..+..+...... ......|.+......| .+
T Consensus 128 ~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ 207 (245)
T 3nfj_J 128 VFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRN 207 (245)
T ss_dssp EEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTC
T ss_pred eecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCC
Confidence 222233335569999999999995 545 78999999999775433211 0111234433333344 66
Q ss_pred EEEEEEecc
Q psy2775 763 VLEVEVTSD 771 (785)
Q Consensus 763 ~~~c~~~~~ 771 (785)
.|+|.|.++
T Consensus 208 ~YtC~v~~~ 216 (245)
T 3nfj_J 208 HFRCQVQFY 216 (245)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999864
No 347
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.69 E-value=1.9e-16 Score=152.06 Aligned_cols=174 Identities=13% Similarity=0.215 Sum_probs=113.9
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EEcc----------------CCCCEEEeecCCccceEEEEEEc
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EPLQ----------------ETDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~~~----------------~~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
.|..+.+.+|++++|.|.+.+.+ .+.+.|++++ ..+. ...++.+..+.. ....+|+|.
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L~I~ 83 (215)
T 1c5d_H 6 ESGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTS--KSQVFLKMN 83 (215)
T ss_dssp EECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETT--TTEEEEEES
T ss_pred cCCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCC--CceEEEEEC
Confidence 46778999999999999998764 4789999863 1110 113444433221 123569999
Q ss_pred ccCCCCCeEEEEEEEcCCee---EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEeECCE
Q psy2775 78 SIKKREEGVYTVVAKNREGE---AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYKDGK 152 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~~~---~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~~~g~ 152 (785)
+++.+|+|.|.|.+.+..+. ......|.|....+.+|.+........+..|+.+.|.|.+.|. |.+ .|.|+++|.
T Consensus 84 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~ 163 (215)
T 1c5d_H 84 SLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGAL 163 (215)
T ss_dssp SCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTT
T ss_pred CCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCc
Confidence 99999999999999986421 1123567776444456666543323345789999999999886 777 999999986
Q ss_pred Ecccc--eEEEeCCEEEE--EEcccCCCCcEEEEEEEEcCCeeEEE
Q psy2775 153 LIKDR--QITSEKNTHTL--TLIQCSTKDKGRYSVKVTNKEGTVES 194 (785)
Q Consensus 153 ~~~~~--~~~~~~~~~~L--~i~~~~~~d~G~Y~C~a~n~~g~~~~ 194 (785)
.+... ......+...+ .+.....+| |.|+|.|.|..+....
T Consensus 164 ~~~~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~ 208 (215)
T 1c5d_H 164 SSDVHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKV 208 (215)
T ss_dssp CCSCCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEE
T ss_pred cCceEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccE
Confidence 54311 11112232222 123444456 9999999998876543
No 348
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.69 E-value=2.5e-16 Score=154.26 Aligned_cols=184 Identities=13% Similarity=0.147 Sum_probs=121.4
Q ss_pred CCeeeecCCceEecCCCeEEEEEEEEec--CCCeeEEEECC--EE---cc--------------CCCCEEEeecCCccce
Q psy2775 12 PPTFSKKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNG--EP---LQ--------------ETDEVVFSDQSDMHSY 70 (785)
Q Consensus 12 ~p~~~~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~--~~---~~--------------~~~~~~~~~~~~~~~~ 70 (785)
++.+...|..+.+.+|++++|.|.+.+. +.+.+.|+|+. .. +. ...|+.+..+.. ..
T Consensus 1 ~~~v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~ 78 (242)
T 1hxm_B 1 AGHLEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPE--TS 78 (242)
T ss_dssp CCEEECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETT--TT
T ss_pred CCccCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCC--Cc
Confidence 3567778899999999999999999875 56789999853 11 10 223444433221 12
Q ss_pred EEEEEEcccCCCCCeEEEEEEEcCCe-----e--EEEEeeEEEeCCCC-----CCCceecCCCceEeccCCcEEEEEEEe
Q psy2775 71 VSIVTIKSIKKREEGVYTVVAKNREG-----E--AKMDIPVKVNTGKP-----EKPSILEPLHDVSITEGESAVLSVQVG 138 (785)
Q Consensus 71 ~~~L~i~~~~~~D~G~Y~C~a~~~~~-----~--~~~~~~v~v~~~~~-----~~p~i~~~~~~~~~~~G~~v~l~C~~~ 138 (785)
..+|+|.+++.+|+|.|.|.+.+... . ......|.|..... ..|.+.. +....+..|+.+.|.|.+.
T Consensus 79 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~-p~~~~~~~g~~v~L~C~~~ 157 (242)
T 1hxm_B 79 TSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFL-PSIAETKLQKAGTYLCLLE 157 (242)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCC-CCGGGGGSSSCEEEEEEEE
T ss_pred EEEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEEC-CChhhcccCCCceEEEEEe
Confidence 35799999999999999999987531 1 11235677764211 1222322 3334566799999999998
Q ss_pred cc-CC-CeEEEeECCE-Ecccce---EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 139 GE-PS-PKVEWYKDGK-LIKDRQ---ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 139 g~-p~-~~v~W~~~g~-~~~~~~---~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
|. |. +.|.|+++|. .+.... ....++ ...|.|.+... | |.|+|.|.|..+.......+.+
T Consensus 158 g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 158 KFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred eEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEeec
Confidence 86 64 6999999987 553321 111222 24688887664 4 9999999998875443444443
No 349
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.69 E-value=7.8e-17 Score=158.50 Aligned_cols=177 Identities=14% Similarity=0.131 Sum_probs=115.8
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEe--------------CCEEecCC----CCeeEEee-CCeEEEEEc
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFR--------------NNKPLLSS----PKKREIFD-GENIILELK 619 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~--------------~~~~i~~~----~~~~~~~~-~~~~~L~i~ 619 (785)
+.+...+..+.+.+|++++|.| ..+.|.+.|.||| ++..+... .++..... ...++|.|.
T Consensus 3 ~~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 3 PKVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp CCCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred cceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 4455666788999999999999 7788999999999 23222221 44444332 346789999
Q ss_pred cCCCCCCceeEEEEEEcC----CcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCC
Q psy2775 620 EADSETDAGDYKVVATNE----LGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPV 695 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~----~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 695 (785)
+++. +|+|.|.|.|.+. .+.....+.|.|... .....+|.
T Consensus 82 ~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~~~~p~ 125 (245)
T 4ei6_B 82 PTAL-EDSAVYFCASSFWGAYAEQFFGPGTRLTVLED-----------------------------------LKNVFPPE 125 (245)
T ss_dssp SCCG-GGCEEEEEEEECSSTTCCCEECCCEEEEEESC-----------------------------------GGGCBCCE
T ss_pred CCCH-hHCEEEEEEEccCCCcceEEEcCCcEEEEecc-----------------------------------cCCCCCce
Confidence 9999 9999999999963 223333455666410 00113444
Q ss_pred cCCCCCCcEEeecCCeEEEEEEEec-CCCC-ceEEeECCEEeeeccccccch------------hhhcccccceeeeee-
Q psy2775 696 IDPPPPPEVLVKKGEDLKIEVRFKA-LPPP-KAEWTVNGTVIVPSKRVKGKA------------EFIKKLDDLEVKERE- 760 (785)
Q Consensus 696 i~~~~~~~~~~~~g~~~~l~C~~~g-~P~p-~i~W~~~~~~~~~~~~~~~~~------------~~~~~l~~~~v~~~~- 760 (785)
+....+....+..|+.++|.|.+.| .|+| .|.|++||..+..+.+..... .....|.+......|
T Consensus 126 ~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~ 205 (245)
T 4ei6_B 126 VAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNP 205 (245)
T ss_dssp EEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCT
T ss_pred EEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccC
Confidence 4322333334567999999999999 4555 899999999998765432211 111234444444455
Q ss_pred ceEEEEEEeccc
Q psy2775 761 NAVLEVEVTSDK 772 (785)
Q Consensus 761 ~~~~~c~~~~~~ 772 (785)
.+.|+|.|.++.
T Consensus 206 ~g~ytC~v~~~~ 217 (245)
T 4ei6_B 206 RNHFRCQVQFYG 217 (245)
T ss_dssp TCEEEEEEEECC
T ss_pred CCeEEEEEEECC
Confidence 899999998743
No 350
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.69 E-value=2.1e-16 Score=129.72 Aligned_cols=94 Identities=19% Similarity=0.491 Sum_probs=82.7
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCC--CEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETD--EVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
+.||+|...|.++.+.+|++++|.|.+.|.|.|.|.|++++..+.... ++.+...++. ++|+|.+++.+|+|.|
T Consensus 3 ~~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~----~~L~I~~~~~~D~G~Y 78 (100)
T 3knb_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDL----TTLIIMDVQKQDGGLY 78 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSE----EEEEESSCCGGGCEEE
T ss_pred CCCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccce----EEEEEcCCCccCCEEE
Confidence 468999999999999999999999999999999999999999987654 4555554432 5699999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEe
Q psy2775 88 TVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~ 107 (785)
+|.|.|..|.....+.|.|.
T Consensus 79 ~C~a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 79 TLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEECCCEEEEEEEEEEE
Confidence 99999999999988888885
No 351
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.69 E-value=3.5e-16 Score=156.75 Aligned_cols=186 Identities=16% Similarity=0.221 Sum_probs=123.7
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEec--CCCeeEEEECCE--Ec------c-----------CCCCEEEeecCCccceE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNGE--PL------Q-----------ETDEVVFSDQSDMHSYV 71 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~~--~~------~-----------~~~~~~~~~~~~~~~~~ 71 (785)
+.+.. |..+.+.+|++|+|.|.+.+. +.+.+.||+... .. . ...++.+..+... ..
T Consensus 2 ~~v~q-p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~ 78 (280)
T 3fku_X 2 VQLVQ-SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQST--RT 78 (280)
T ss_dssp CCEEC-CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTT--TE
T ss_pred CeEEc-CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCC--CE
Confidence 44566 888999999999999999775 557899997431 10 0 0123333322211 22
Q ss_pred EEEEEcccCCCCCeEEEEEEEcC---------CeeEEEEeeEEEeCCC-----------CCCCceecCCCceEeccCCcE
Q psy2775 72 SIVTIKSIKKREEGVYTVVAKNR---------EGEAKMDIPVKVNTGK-----------PEKPSILEPLHDVSITEGESA 131 (785)
Q Consensus 72 ~~L~i~~~~~~D~G~Y~C~a~~~---------~~~~~~~~~v~v~~~~-----------~~~p~i~~~~~~~~~~~G~~v 131 (785)
.+|+|.+++.+|+|.|.|.+.+. .........|.|.... ..+|.+...+. ..+.+|+++
T Consensus 79 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v 157 (280)
T 3fku_X 79 AYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTA 157 (280)
T ss_dssp EEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCE
T ss_pred EEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCE
Confidence 56999999999999999999986 1222234456665301 12555666655 889999999
Q ss_pred EEEEEEec-cC-CCeEEEeEC--CEEcc-------------cc--eEEEeCCEEEEEEcccCCCCcEEEEEEEEcCC--e
Q psy2775 132 VLSVQVGG-EP-SPKVEWYKD--GKLIK-------------DR--QITSEKNTHTLTLIQCSTKDKGRYSVKVTNKE--G 190 (785)
Q Consensus 132 ~l~C~~~g-~p-~~~v~W~~~--g~~~~-------------~~--~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~--g 190 (785)
+|.|.+.+ .+ .+.+.|||. +..+. .. .........+|+|.+++.+|+|.|.|.+.+.. .
T Consensus 158 ~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~ 237 (280)
T 3fku_X 158 TLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSSLSA 237 (280)
T ss_dssp EEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETTTTE
T ss_pred EEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCCCCc
Confidence 99999987 43 478999982 22211 01 12234456789999999999999999999876 2
Q ss_pred e-EEEEEEEEeec
Q psy2775 191 T-VESAANLNVDP 202 (785)
Q Consensus 191 ~-~~~~~~l~V~~ 202 (785)
. ....+.|.|..
T Consensus 238 ~~~g~~t~l~V~~ 250 (280)
T 3fku_X 238 VVFGGGTKLTVLG 250 (280)
T ss_dssp EEEBCCCEEEEC-
T ss_pred eEECCCEEEEECC
Confidence 1 22335666653
No 352
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.68 E-value=2.4e-16 Score=151.46 Aligned_cols=177 Identities=14% Similarity=0.056 Sum_probs=113.0
Q ss_pred CCCeEEecCCcEEEEEEEeC---CCceEEEEECC--EE---c-------------ccCCCEEEEEeCcEEEEEEccCCCC
Q psy2775 422 LQDVKVSRDEKASFEIELTK---GDALVKWYKDG--KE---I-------------AFSENVTLSIDGKKQKLIIFSAGLE 480 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~~---~-------------~~~~~~~~~~~~~~~~L~i~~~~~~ 480 (785)
+....+.+|++++|.|.+.+ +.+.+.|+|.. .. + ....++.+...+....|+|.+++.+
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (215)
T 3nl4_H 6 SGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTE 85 (215)
T ss_dssp ECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGG
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcc
Confidence 34567889999999999986 25679999732 11 1 1235666666667788999999999
Q ss_pred CcEEEEEEEeec-Cc----ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCC
Q psy2775 481 DAGEYSCRVGDT-GD----KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSP 555 (785)
Q Consensus 481 d~G~Y~C~a~n~-g~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~ 555 (785)
|+|.|.|.+.|. +. ......|.|...+.
T Consensus 86 D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~----------------------------------------------- 118 (215)
T 3nl4_H 86 DTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQP----------------------------------------------- 118 (215)
T ss_dssp GCEEEEEEEECSSSSCEEEECCCEEEEECSSCC-----------------------------------------------
T ss_pred cCEEEEEEEecCCCccceEEcCCEEEEEeCCCc-----------------------------------------------
Confidence 999999999986 32 23345666653210
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCC--ceEEEeCCEEecCCCCeeEEeeCCeEEE-EEccCCCCCCceeEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAP--SIVWFRNNKPLLSSPKKREIFDGENIIL-ELKEADSETDAGDYKV 632 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p--~v~W~~~~~~i~~~~~~~~~~~~~~~~L-~i~~~~~~~d~G~Y~C 632 (785)
.+|.+........+.+|+.++|.|.+.|.|++ .+.|+|+|..+...........++.+.+ ....+.. .| |.|+|
T Consensus 119 -~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~-~d-g~ytC 195 (215)
T 3nl4_H 119 -KAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTS-SS-QPVTC 195 (215)
T ss_dssp -BCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC-----CCEE
T ss_pred -CCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEec-cC-CEEEE
Confidence 01444322233456789999999999997543 5779999975532221112222333222 2244556 67 99999
Q ss_pred EEEcCCcceEEEEEEE
Q psy2775 633 VATNELGSATHGARVT 648 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~ 648 (785)
.|.|..|.......|.
T Consensus 196 ~v~~~~~~~~~~~~l~ 211 (215)
T 3nl4_H 196 NVAHPATNTKVDKTVA 211 (215)
T ss_dssp EEEEGGGTEEEEEECC
T ss_pred EEEeCCCCcceEEecC
Confidence 9999999877665554
No 353
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.68 E-value=1.2e-16 Score=156.95 Aligned_cols=174 Identities=14% Similarity=0.191 Sum_probs=104.0
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--EE---c---c-----------CCCCEEEeecCCccceEEEEE
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--EP---L---Q-----------ETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~~---~---~-----------~~~~~~~~~~~~~~~~~~~L~ 75 (785)
..|..+.+.+|++++|.|.+.+.+ .+.+.||++. .. + . ...|+.+..+.. .....|+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~ 82 (257)
T 3bn9_D 5 VQSGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNS--KNTLYLQ 82 (257)
T ss_dssp EEECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETT--TTEEEEE
T ss_pred EccCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCC--CCEEEEE
Confidence 345678999999999999998765 5789999853 11 1 0 123444433211 1235699
Q ss_pred EcccCCCCCeEEEEEEEcCCe----------e---EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-C
Q psy2775 76 IKSIKKREEGVYTVVAKNREG----------E---AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-P 141 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~~----------~---~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p 141 (785)
|.+++.+|+|.|.|.+.+..+ . ......|.|....+.+|.+........+..|+.++|.|.+.|. |
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P 162 (257)
T 3bn9_D 83 MSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFP 162 (257)
T ss_dssp EESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBS
T ss_pred ECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEEC
Confidence 999999999999999998754 1 1123467776434456766543333346789999999999885 7
Q ss_pred CC-eEEEeECCEEcccc---eEEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEE
Q psy2775 142 SP-KVEWYKDGKLIKDR---QITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVE 193 (785)
Q Consensus 142 ~~-~v~W~~~g~~~~~~---~~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 193 (785)
.+ .|+|+++|..+... .....++ ...|.|.+...+| |.|+|.|.|......
T Consensus 163 ~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 163 EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp SCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEE
T ss_pred CCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 66 99999998764321 1111122 2457888877778 999999999765433
No 354
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.68 E-value=4.9e-17 Score=162.34 Aligned_cols=184 Identities=14% Similarity=0.166 Sum_probs=117.8
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeC--CE------------EecCC----CCeeEEe-eCCeEEEEEc
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRN--NK------------PLLSS----PKKREIF-DGENIILELK 619 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~--~~------------~i~~~----~~~~~~~-~~~~~~L~i~ 619 (785)
+.+...+....+.+|++++|.|.+. .|.+.+.|||. +. ..... .++.... ....++|+|.
T Consensus 27 ~~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 27 AGVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp SSCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred ceeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 5556666778999999999999987 67889999992 21 11111 3443333 2346789999
Q ss_pred cCCCCCCceeEEEEEEcC--CcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcC
Q psy2775 620 EADSETDAGDYKVVATNE--LGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVID 697 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~ 697 (785)
+++. +|+|.|.|.|.|. .+.......|.|... +....+|.+.
T Consensus 106 ~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~~~~P~v~ 149 (268)
T 3pl6_D 106 RTER-GDSAVYLCATSALGDTQYFGPGTRLTVLED-----------------------------------LKNVFPPEVA 149 (268)
T ss_dssp SCCG-GGCEEEEEEEESSSSSCEECCCEEEEEESC-----------------------------------GGGCBCCEEE
T ss_pred CCCc-ccCEEEEEEEecCCCceeeCCcEEEEEecC-----------------------------------cccccCCceE
Confidence 9999 9999999999984 333333455666520 0011345443
Q ss_pred CCCCCcEEeecCCeEEEEEEEecCCCC--ceEEeECCEEeeeccccccc------------hhhhcccccceeeeee-ce
Q psy2775 698 PPPPPEVLVKKGEDLKIEVRFKALPPP--KAEWTVNGTVIVPSKRVKGK------------AEFIKKLDDLEVKERE-NA 762 (785)
Q Consensus 698 ~~~~~~~~~~~g~~~~l~C~~~g~P~p--~i~W~~~~~~~~~~~~~~~~------------~~~~~~l~~~~v~~~~-~~ 762 (785)
...+....+..|+.++|.|.+.|.|++ .|+|++||..+..+.+.... ......|.+......| .|
T Consensus 150 ~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g 229 (268)
T 3pl6_D 150 VFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRN 229 (268)
T ss_dssp EECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTC
T ss_pred EeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCC
Confidence 323333446679999999999996654 89999999999765433210 0111233333333344 89
Q ss_pred EEEEEEeccc--ceeEEee
Q psy2775 763 VLEVEVTSDK--ADVKWFK 779 (785)
Q Consensus 763 ~~~c~~~~~~--~~~~w~~ 779 (785)
.|+|.|.++. .+..|..
T Consensus 230 ~YtC~v~~~~l~~~~~~~~ 248 (268)
T 3pl6_D 230 HFRCQVQFYGLSENDEWTQ 248 (268)
T ss_dssp EEEEEEEECCBCTTSCCCS
T ss_pred EEEEEEEcCCCCCCccccC
Confidence 9999998743 2345543
No 355
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.68 E-value=4.3e-16 Score=156.11 Aligned_cols=189 Identities=15% Similarity=0.172 Sum_probs=122.1
Q ss_pred CCCeEEecCCcEEEEEEEeC---CCceEEEEECC--EEc-----------------ccCCCEEEEEe--CcEEEEEEccC
Q psy2775 422 LQDVKVSRDEKASFEIELTK---GDALVKWYKDG--KEI-----------------AFSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
+....+.+|++++|.|.+.+ +.+.+.|++.. ... ....++.+..+ .....|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 56678899999999999987 35679999742 110 01235555533 34678999999
Q ss_pred CCCCcEEEEEEEeec----------CcceeEEEEEEEc-CcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccc
Q psy2775 478 GLEDAGEYSCRVGDT----------GDKESKATLTVEA-PAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFI 546 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~----------g~~~~~~~l~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 546 (785)
+.+|+|.|.|.+.|. ........|.|.. ++... .
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~-~---------------------------------- 131 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSG-G---------------------------------- 131 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC------------------------------------------
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccC-C----------------------------------
Confidence 999999999999984 1122345566654 11000 0
Q ss_pred ccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEec-CC-CCceEEEeC--CEEec------------CCCCeeEEee
Q psy2775 547 VPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKA-SP-APSIVWFRN--NKPLL------------SSPKKREIFD 610 (785)
Q Consensus 547 ~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P-~p~v~W~~~--~~~i~------------~~~~~~~~~~ 610 (785)
+.......+|.+...+. ..+.+|++++|.|.+.+ .+ .+.+.|||. +..+. ...++.....
T Consensus 132 ---~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~ 207 (280)
T 3fku_X 132 ---GGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRS 207 (280)
T ss_dssp ----------CCCSBBCCSE-EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEE
T ss_pred ---CCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEcc
Confidence 00000001234444444 78999999999999998 44 379999983 22211 1234555556
Q ss_pred CCeEEEEEccCCCCCCceeEEEEEEcCCcc---eEEEEEEEEE
Q psy2775 611 GENIILELKEADSETDAGDYKVVATNELGS---ATHGARVTVD 650 (785)
Q Consensus 611 ~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~---~~~~~~l~V~ 650 (785)
+..++|+|.+++. +|+|.|.|.|.|..+. ....+.|.|.
T Consensus 208 ~~~~~L~I~~v~~-~DsG~Y~C~~~~~~~~~~~~g~~t~l~V~ 249 (280)
T 3fku_X 208 GNTASLTITGLQP-EDEADYYCSTWDSSLSAVVFGGGTKLTVL 249 (280)
T ss_dssp TTEEEEEECSCCG-GGCSEEEEEEEETTTTEEEEBCCCEEEEC
T ss_pred CCEEEEEECCCCH-HHCEEEEEEEecCCCCceEECCCEEEEEC
Confidence 6778899999999 9999999999998632 1122455554
No 356
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.67 E-value=4.5e-16 Score=156.07 Aligned_cols=177 Identities=16% Similarity=0.242 Sum_probs=122.0
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE--E---c----c----------CCCCEEEeecCCccceE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE--P---L----Q----------ETDEVVFSDQSDMHSYV 71 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~--~---~----~----------~~~~~~~~~~~~~~~~~ 71 (785)
..+.+...|..+.+.+|++++|.|.+.+.+.+.+.|++++. . + . ...++.+..+. ...
T Consensus 23 ~~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~---~~~ 99 (279)
T 2wbj_D 23 GGAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHAS---LTL 99 (279)
T ss_dssp CCCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECS---SSE
T ss_pred ccceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCC---CCE
Confidence 35778888999999999999999999887888999998641 1 0 0 12344444321 123
Q ss_pred EEEEEcccCCCCCeEEEEEEEcCCe------eEEEEeeEEEeCC--CCCCCceecC-CCceEeccCCcEEEEEEEecc-C
Q psy2775 72 SIVTIKSIKKREEGVYTVVAKNREG------EAKMDIPVKVNTG--KPEKPSILEP-LHDVSITEGESAVLSVQVGGE-P 141 (785)
Q Consensus 72 ~~L~i~~~~~~D~G~Y~C~a~~~~~------~~~~~~~v~v~~~--~~~~p~i~~~-~~~~~~~~G~~v~l~C~~~g~-p 141 (785)
.+|+|.+++.+|+|.|+|.+.+..+ .......|.|... ...+|.+... +....+..|+.+.|.|.+.|. |
T Consensus 100 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P 179 (279)
T 2wbj_D 100 STLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 179 (279)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBS
T ss_pred EEEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcC
Confidence 5799999999999999999998321 1122345666532 1235655432 333445579999999999886 4
Q ss_pred C-CeEEEeECCEEcccceEEE----------eCC----EEEEEEcccCCC-CcEEEEEEEEcCCe
Q psy2775 142 S-PKVEWYKDGKLIKDRQITS----------EKN----THTLTLIQCSTK-DKGRYSVKVTNKEG 190 (785)
Q Consensus 142 ~-~~v~W~~~g~~~~~~~~~~----------~~~----~~~L~i~~~~~~-d~G~Y~C~a~n~~g 190 (785)
+ +.|+|++||..+....... .++ ...|.|...... |.|.|+|.|.|...
T Consensus 180 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~ 244 (279)
T 2wbj_D 180 DHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 244 (279)
T ss_dssp SCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCB
T ss_pred CCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCC
Confidence 3 6999999999886543211 122 234778777665 47889999998754
No 357
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.67 E-value=3e-17 Score=159.67 Aligned_cols=191 Identities=16% Similarity=0.203 Sum_probs=112.8
Q ss_pred cCCCCCCCCCeEeeeeeeee-eeecCeEEEEEEEecC---CCC-ceEEEeCCEEecCCCC-eeEEeeC----CeEEEEEc
Q psy2775 550 CPLGSPGQAPLFIERFEEKT-VKEKGTIRLMAKVKAS---PAP-SIVWFRNNKPLLSSPK-KREIFDG----ENIILELK 619 (785)
Q Consensus 550 ~~~~~~~~~p~~~~~~~~~~-v~~g~~v~l~C~~~g~---P~p-~v~W~~~~~~i~~~~~-~~~~~~~----~~~~L~i~ 619 (785)
|.......+..++.++.... +.+|++++|.|.+.|. |.+ .|+|+|++..+..... ....+.+ ..+.|.|.
T Consensus 8 ~~~~~~~~P~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~ 87 (239)
T 1i1c_A 8 CGCTGSEVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIV 87 (239)
T ss_dssp ---------CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECC
T ss_pred CCCCCCcCCEEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEE
Confidence 43333333344444444444 7899999999999987 877 8999999877643211 0111111 23579999
Q ss_pred cCCCCCCceeEEEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCC
Q psy2775 620 EADSETDAGDYKVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPP 699 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~ 699 (785)
+++. +|+|.|+|.|.|..|....+..+.+. ..+..+|.+...
T Consensus 88 ~~~~-~D~g~Y~C~~~~~~~~~~~~~~v~~~-------------------------------------~~~~~~P~v~v~ 129 (239)
T 1i1c_A 88 ERDW-LNGKTFKCKVNSGAFPAPIEKSISKP-------------------------------------EGTPRGPQVYTM 129 (239)
T ss_dssp HHHH-HTTCCEEEEEECSSSSSCEEEEECCC-------------------------------------SSCCBCCEEEEE
T ss_pred hhHc-cCCCeEEEEEecccCCCCcEEEEecC-------------------------------------CCCCcCCEEEEE
Confidence 9998 99999999999998864332222110 012244554332
Q ss_pred CCCcEEeecCCeEEEEEEEecC-CCC-ceEEeECCEEeeecccccc--chh-hhcccccceeeee---eceEEEEEEecc
Q psy2775 700 PPPEVLVKKGEDLKIEVRFKAL-PPP-KAEWTVNGTVIVPSKRVKG--KAE-FIKKLDDLEVKER---ENAVLEVEVTSD 771 (785)
Q Consensus 700 ~~~~~~~~~g~~~~l~C~~~g~-P~p-~i~W~~~~~~~~~~~~~~~--~~~-~~~~l~~~~v~~~---~~~~~~c~~~~~ 771 (785)
..... ...|+.++|.|.+.|+ |++ .|+|++||..+........ ..+ .........+... +.+.|+|.|.++
T Consensus 130 ~~~~~-~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~ 208 (239)
T 1i1c_A 130 APPKE-EMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHE 208 (239)
T ss_dssp CCCGG-GGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECT
T ss_pred CCChH-HhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECC
Confidence 22211 2348899999999994 543 8999999998865432211 111 0111122334443 489999999974
Q ss_pred c----ceeEEee
Q psy2775 772 K----ADVKWFK 779 (785)
Q Consensus 772 ~----~~~~w~~ 779 (785)
. ....|..
T Consensus 209 ~l~~~~~~~~~~ 220 (239)
T 1i1c_A 209 GLENEHTEKSLS 220 (239)
T ss_dssp TSGGGEEEEEEC
T ss_pred CCCCCcEEEecc
Confidence 3 3566654
No 358
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.67 E-value=4.8e-15 Score=137.67 Aligned_cols=235 Identities=17% Similarity=0.310 Sum_probs=158.2
Q ss_pred CCCceEeccCCcEEEEEEEe-ccC---CCeEEEeECCEEcccceEEEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEE
Q psy2775 119 PLHDVSITEGESAVLSVQVG-GEP---SPKVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVES 194 (785)
Q Consensus 119 ~~~~~~~~~G~~v~l~C~~~-g~p---~~~v~W~~~g~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 194 (785)
.+....+..|+.++|.|.+. |.| +..++|+|||..+.. ....|.|..+...|+|.|+|.+.+..|....
T Consensus 8 ~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsG-------aT~tLti~s~t~sdSG~YqCvVTDa~Gcs~t 80 (304)
T 3shs_A 8 QSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHEN-------NTATLTVADATSENAGSYKVTVQDTDTMTSV 80 (304)
T ss_dssp EESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSC-------CSSEEEESSCCGGGCEEEEEEEEETTTCCEE
T ss_pred CCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccC-------CcceEEeeeccccCCeEEEEEEEECCCCeee
Confidence 34566788999999999985 456 448999999988653 2337999999999999999999998876555
Q ss_pred EEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCee-eecCCcceeCCCCeEEEEEEE--c-cCC-----CC
Q psy2775 195 AANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSI-LEPLHDVSITEGESAVLSVQV--G-GEP-----SP 265 (785)
Q Consensus 195 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~G~~~~l~C~~--~-g~p-----~~ 265 (785)
+..+.|.... .+.+ ...+....+..|..+.|.+.+ . |.| ..
T Consensus 81 Ss~VtVT~~a------------------------------~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~y 130 (304)
T 3shs_A 81 ESEVFLMEEA------------------------------ELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYEL 130 (304)
T ss_dssp ECCCEEECBC------------------------------CEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCC
T ss_pred eeeEEEeccC------------------------------ceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCc
Confidence 4444444221 0111 112334445567889999887 4 445 45
Q ss_pred eEEEEECCEEcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCCce--EEEEEEEEeccccceeeeccceeEeeCcc
Q psy2775 266 KVEWYKDGKLIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTV--ESAANLNVDQGKAEFIKKLDDLEVKEREN 343 (785)
Q Consensus 266 ~v~W~~~~~~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~--~~~~~l~v~~~~~~~~~~~~~~~~~~g~~ 343 (785)
+++|++++..+. +...|++......++|.|+|.++|..+.. +.++.+.+... ..-........+..|+.
T Consensus 131 TYQWyKngt~Is--------gAq~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~~-~v~~~~~~~~~~~~~~~ 201 (304)
T 3shs_A 131 HYSWSKGEDVID--------TTQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATM-NVDQDVVESKTVALGNE 201 (304)
T ss_dssp EEEEEETTEEEE--------SSSEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECEE-EEEECCCSEEEEETTSC
T ss_pred eeEEeeCCeEcc--------CccccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEcc-ccchhheEeehhhcCcE
Confidence 999999998764 22367888899999999999999987633 33345544431 11122234456777888
Q ss_pred EEEEEEEc----C-----CC--CeEEEE--ECCEEcC---------CCCcEEEEEcCcEEEEEEcCCCCCCceEEEEEEe
Q psy2775 344 AVLEVEVT----S-----DK--ADVKWF--KDGQEIK---------TSKKVTIEKKGTIRKLLIRNISVHDEGEYTCSLP 401 (785)
Q Consensus 344 ~~l~C~~~----~-----~~--~~v~W~--~~~~~l~---------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 401 (785)
+.|.-.+. + |. .++.|+ ++|+.-+ .-..+.+..+|. |.-.....+|...|.|.+.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 202 ISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH---LFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp EEECCEEEEECCSCCTTCCEEEEEEEEEEECTTCCSCEEEESSSEECGGGEEECTTSC---EEESSCCGGGCEEEEEEEE
T ss_pred EEEEEEEeeccccCCCCCCceEEEEEEEEeecCccCchhhhhhhhhhhccceeCCCcc---eeecccccccchheeeHHH
Confidence 88765543 1 11 257787 3443221 112566777776 7778888999999999986
Q ss_pred c
Q psy2775 402 D 402 (785)
Q Consensus 402 n 402 (785)
.
T Consensus 279 ~ 279 (304)
T 3shs_A 279 L 279 (304)
T ss_dssp E
T ss_pred H
Confidence 3
No 359
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.67 E-value=1.9e-16 Score=157.13 Aligned_cols=187 Identities=14% Similarity=0.183 Sum_probs=110.2
Q ss_pred CCcccccCCCeEEecCCcEEEEEEEeC-CCceEEEEEC--CEE---ccc-C-------------CCEEEEE--eCcEEEE
Q psy2775 415 PPEISVPLQDVKVSRDEKASFEIELTK-GDALVKWYKD--GKE---IAF-S-------------ENVTLSI--DGKKQKL 472 (785)
Q Consensus 415 ~~~~~~~~~~~~v~~g~~~~l~C~~~~-~~~~i~W~~~--~~~---~~~-~-------------~~~~~~~--~~~~~~L 472 (785)
+|.+...+..+.+.+|++++|.|.+.+ +.+.+.|++. +.. +.. . .+..... ......|
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred ccccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 345556677888999999999999987 5678999982 111 000 0 0111111 1234579
Q ss_pred EEccCCCCCcEEEEEEEeec-C---cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccccc
Q psy2775 473 IIFSAGLEDAGEYSCRVGDT-G---DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVP 548 (785)
Q Consensus 473 ~i~~~~~~d~G~Y~C~a~n~-g---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 548 (785)
+|.+++.+|+|.|.|.|.|. + .......|.|..+...- +.....+
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~----~~~~~~~--------------------------- 130 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSA----DDAKKDA--------------------------- 130 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC-------------------------------------------
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCc----ccccccc---------------------------
Confidence 99999999999999999986 4 23345677777642100 0000000
Q ss_pred ccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCCceEEEeCCE--Eec------------CCCCeeEE--eeC
Q psy2775 549 TCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAPSIVWFRNNK--PLL------------SSPKKREI--FDG 611 (785)
Q Consensus 549 ~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p~v~W~~~~~--~i~------------~~~~~~~~--~~~ 611 (785)
.....+|.+...+....+.+|++++|.|.+.+. |.+.+.|||++. .+. ...++.+. ...
T Consensus 131 ----~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 206 (259)
T 3omz_A 131 ----AKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAA 206 (259)
T ss_dssp ----------CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGG
T ss_pred ----ccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcC
Confidence 000012566666667889999999999999885 788999999531 110 01223222 123
Q ss_pred CeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 612 ENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 612 ~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
..+.|+|.+++. +|+|.|.|.|.+.
T Consensus 207 ~~~~L~I~~v~~-~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 207 KSVALTISALQL-EDSAKYFCALGES 231 (259)
T ss_dssp TBCCEEESSCCG-GGCSEEEEEEESC
T ss_pred CEEEEEECCCCh-hHCEEEEEEEeCc
Confidence 456799999999 9999999999853
No 360
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.66 E-value=3e-17 Score=159.32 Aligned_cols=183 Identities=11% Similarity=0.101 Sum_probs=115.1
Q ss_pred Ce-EeeeeeeeeeeecCeEEEEEEEecC-CC-C-ceEEEeCCEEe-cCCCCeeEEeeCC----eEEEEEccCCCCCCcee
Q psy2775 559 PL-FIERFEEKTVKEKGTIRLMAKVKAS-PA-P-SIVWFRNNKPL-LSSPKKREIFDGE----NIILELKEADSETDAGD 629 (785)
Q Consensus 559 p~-~~~~~~~~~v~~g~~v~l~C~~~g~-P~-p-~v~W~~~~~~i-~~~~~~~~~~~~~----~~~L~i~~~~~~~d~G~ 629 (785)
|. ++..+....+.+|++++|.|.+.|+ |. | .|+|+++|..+ ...........++ .+.|.|.++.. +|+|.
T Consensus 13 P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~-~D~g~ 91 (231)
T 2w59_A 13 IQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDW-LSGER 91 (231)
T ss_dssp CEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHH-HTTCC
T ss_pred CEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhc-cCCCE
Confidence 44 4456666778899999999999995 74 5 99999999887 3322221111222 34799999998 99999
Q ss_pred EEEEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecC
Q psy2775 630 YKVVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKG 709 (785)
Q Consensus 630 Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g 709 (785)
|+|.|.|..+.. .+.+.|.... ....+|.+....+....+ .|
T Consensus 92 Y~C~~~~~~~~~--~~~~~v~~~~-----------------------------------~~~~~P~v~v~~~~~~~~-~~ 133 (231)
T 2w59_A 92 FTCTVQHEELPL--PLSKSVYRNT-----------------------------------GPTTPPLIYPFAPHPEEL-SL 133 (231)
T ss_dssp EEEEEECTTCSS--CEEEEECCCC-----------------------------------SCCBCCEEEEECCCGGGG-GS
T ss_pred EEEEEEcCCCCC--ceEEEEecCC-----------------------------------CCCcCCEEEEeCCCHHHh-cc
Confidence 999999988753 2334443100 011234332211111112 25
Q ss_pred CeEEEEEEEecC-C-CCceEEeECCEEeeecccccc----c-----------hhh--hcccccceeeeeeceEEEEEEec
Q psy2775 710 EDLKIEVRFKAL-P-PPKAEWTVNGTVIVPSKRVKG----K-----------AEF--IKKLDDLEVKERENAVLEVEVTS 770 (785)
Q Consensus 710 ~~~~l~C~~~g~-P-~p~i~W~~~~~~~~~~~~~~~----~-----------~~~--~~~l~~~~v~~~~~~~~~c~~~~ 770 (785)
..++|.|.+.|+ | .+.|+|++||..+..+..... . ..| .+.|.+......|.|.|+|.|.+
T Consensus 134 ~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n 213 (231)
T 2w59_A 134 SRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVH 213 (231)
T ss_dssp SEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEEC
T ss_pred CceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEc
Confidence 579999999996 4 368999999999977642111 0 111 12344444444558999999997
Q ss_pred cc----ceeEEeec
Q psy2775 771 DK----ADVKWFKN 780 (785)
Q Consensus 771 ~~----~~~~w~~~ 780 (785)
.. ....|...
T Consensus 214 ~~l~~~~~~~~~~~ 227 (231)
T 2w59_A 214 EALPMRFSQRTLQK 227 (231)
T ss_dssp TTSTTSEEEEEECC
T ss_pred CCCCCchheeeEec
Confidence 43 35677653
No 361
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.66 E-value=1.3e-15 Score=146.21 Aligned_cols=173 Identities=15% Similarity=0.132 Sum_probs=112.9
Q ss_pred CCCeEEecCCcEEEEEEEeCC---CceEEEEECC--EEcc----------------cCCCEEEEEe--CcEEEEEEccCC
Q psy2775 422 LQDVKVSRDEKASFEIELTKG---DALVKWYKDG--KEIA----------------FSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~~~~----------------~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
+....+.+|++++|.|.+.+. .+.+.|+++. ..+. ...++.+..+ +....|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 345678899999999999873 4679999852 2110 1245565543 246789999999
Q ss_pred CCCcEEEEEEEeecC-c---ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCC
Q psy2775 479 LEDAGEYSCRVGDTG-D---KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGS 554 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~g-~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 554 (785)
.+|+|.|.|.+.|.+ . ....+.|.|...+. .
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~----~----------------------------------------- 121 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQT----T----------------------------------------- 121 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCC----B-----------------------------------------
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCCC----C-----------------------------------------
Confidence 999999999999862 2 22346777764210 0
Q ss_pred CCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeCCeEEE--EEccCCCCCCceeE
Q psy2775 555 PGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDGENIIL--ELKEADSETDAGDY 630 (785)
Q Consensus 555 ~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~~~~~L--~i~~~~~~~d~G~Y 630 (785)
+|.+........+.+|+.++|.|.+.|. |.| .|.|++++..+...... ...+++.+.+ .+..... +| |.|
T Consensus 122 ---~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~-~~~~~g~~~~~s~L~~~~~-~~-g~y 195 (215)
T 1c5d_H 122 ---APSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFP-AVLQSGLYTLTSSVTSSTW-PS-QTV 195 (215)
T ss_dssp ---CCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCCBCC-CEEETTEEEEEEEEEESST-TT-SCC
T ss_pred ---CCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCceEecC-cccCCCCEEEEEEEecccC-CC-CeE
Confidence 1333222212345789999999999997 888 99999998764321111 1122233322 2334443 45 999
Q ss_pred EEEEEcCCcceEEEE
Q psy2775 631 KVVATNELGSATHGA 645 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~ 645 (785)
+|.|.|..|......
T Consensus 196 tC~v~n~~~~~~~~~ 210 (215)
T 1c5d_H 196 TCNVAHPASSTKVDK 210 (215)
T ss_dssp EEEEEEGGGTEEEEE
T ss_pred EEEEEeCCCCccEEE
Confidence 999999998765543
No 362
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=1.4e-15 Score=148.82 Aligned_cols=184 Identities=14% Similarity=0.178 Sum_probs=120.2
Q ss_pred cccCCCeEEecCCcEEEEEEEeC---CCceEEEEECC--EE---cc--------------cCCCEEEEEeC--cEEEEEE
Q psy2775 419 SVPLQDVKVSRDEKASFEIELTK---GDALVKWYKDG--KE---IA--------------FSENVTLSIDG--KKQKLII 474 (785)
Q Consensus 419 ~~~~~~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~~---~~--------------~~~~~~~~~~~--~~~~L~i 474 (785)
...+..+.+.+|++++|.|.+.+ +.+.+.|+|.. .. +. ...++.+..+. ....|+|
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (242)
T 1hxm_B 5 EQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTI 84 (242)
T ss_dssp ECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEE
T ss_pred CcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEE
Confidence 34556778999999999999987 45689999842 21 10 23566665443 4678999
Q ss_pred ccCCCCCcEEEEEEEeecC--c------ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccc
Q psy2775 475 FSAGLEDAGEYSCRVGDTG--D------KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFI 546 (785)
Q Consensus 475 ~~~~~~d~G~Y~C~a~n~g--~------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 546 (785)
.+++.+|+|.|.|.+.+.+ . ......|.|...+.... ..|.
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~-~~p~------------------------------ 133 (242)
T 1hxm_B 85 HNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDAD-VSPK------------------------------ 133 (242)
T ss_dssp CSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSC-CSCB------------------------------
T ss_pred CCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCC-cCCC------------------------------
Confidence 9999999999999999853 1 11245777775321000 0000
Q ss_pred ccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CC-CceEEEeCCE-EecCCCCeeEEeeCC----eEEEEEc
Q psy2775 547 VPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PA-PSIVWFRNNK-PLLSSPKKREIFDGE----NIILELK 619 (785)
Q Consensus 547 ~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~-p~v~W~~~~~-~i~~~~~~~~~~~~~----~~~L~i~ 619 (785)
|.+.. +....+.+|+.++|.|.+.|. |. +.|.|++++. .+...........++ ...|.|.
T Consensus 134 ------------~~v~~-p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~ 200 (242)
T 1hxm_B 134 ------------PTIFL-PSIAETKLQKAGTYLCLLEKFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVP 200 (242)
T ss_dssp ------------CCCCC-CCGGGGGSSSCEEEEEEEEEESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEEC
T ss_pred ------------ceEEC-CChhhcccCCCceEEEEEeeEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEc
Confidence 11111 123346679999999999987 75 6999999987 554321111111222 2468887
Q ss_pred cCCCCCCceeEEEEEEcCCcceEEEEEEEE
Q psy2775 620 EADSETDAGDYKVVATNELGSATHGARVTV 649 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 649 (785)
.... | |.|+|.|.|..+.......+.+
T Consensus 201 ~~~~--~-g~y~C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 201 EKSL--D-KEHRCIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp TGGG--G-SCEEEEEEETTSGGGSCEEEEE
T ss_pred cccC--C-CEEEEEEEeCCCCCCceeEeec
Confidence 6643 4 9999999999988766555554
No 363
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.65 E-value=9.6e-16 Score=127.48 Aligned_cols=94 Identities=26% Similarity=0.409 Sum_probs=87.1
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
..+|.|...+.+..+.+|+.++|.|.+.|.|.|.+.|+|++..+..+.++.+...+...+|.|.++.. +|+|.|+|.|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~ 84 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHT-DDSGTYRAVCT 84 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCc-ccCEEEEEEEE
Confidence 34689999999999999999999999999999999999999999888888777778888999999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|..|....++.|.|+
T Consensus 85 N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 85 NYKGEASDYATLDVT 99 (103)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 999999999999887
No 364
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.65 E-value=1.8e-16 Score=153.45 Aligned_cols=181 Identities=18% Similarity=0.240 Sum_probs=119.3
Q ss_pred cCCCCeeeecCCceE-ecCCCeEEEEEEEEecC----CCeeEEEECCEEccCCCCEE-EeecCCccceEEEEEEcccCCC
Q psy2775 9 EGIPPTFSKKTKPVY-AEENSEVTLEVRLVAVP----EPDLLWYYNGEPLQETDEVV-FSDQSDMHSYVSIVTIKSIKKR 82 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~-v~~G~~v~l~C~~~g~p----~~~i~W~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~i~~~~~~ 82 (785)
...|+.+...|.... +..|++++|.|.+.|.+ ...|.|+++|..+....... ....++.....+.|.|...+.+
T Consensus 20 ~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~ 99 (240)
T 4acp_A 20 LGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWL 99 (240)
T ss_dssp ---CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHH
T ss_pred CCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhcc
Confidence 345666777888877 77899999999999874 34799999999885432111 1122334445578999988888
Q ss_pred CCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEEEeECCEEcccceE-
Q psy2775 83 EEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVEWYKDGKLIKDRQI- 159 (785)
Q Consensus 83 D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W~~~g~~~~~~~~- 159 (785)
|.|.|+|.|.+..+.......+........+|.+...........|+.+.|.|.+.|+ |.+ .++|++||..+.....
T Consensus 100 d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~ 179 (240)
T 4acp_A 100 NGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKAT 179 (240)
T ss_dssp HTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEEC
T ss_pred CCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCcc
Confidence 9999999999987643233223221223456777654443333458999999999984 543 8999999998754321
Q ss_pred ---EEeCC----EEEEEEcccCCCCcEEEEEEEEcCC
Q psy2775 160 ---TSEKN----THTLTLIQCSTKDKGRYSVKVTNKE 189 (785)
Q Consensus 160 ---~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~ 189 (785)
...++ .+.|.|.....+|.|.|+|+|.+..
T Consensus 180 ~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 180 PPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp CCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred CceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 11122 2456777666678999999999875
No 365
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=1.5e-15 Score=128.80 Aligned_cols=93 Identities=22% Similarity=0.333 Sum_probs=84.4
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+|.|+..+....+.+|+.++|.|.+.|.|.|.|.|+|++..+..+.++.+...+...+|.|.++.. +|+|.|+|.|.|
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N 84 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQ-EHCGCYTLLVEN 84 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCT-TTCEEEEEEEEC
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCCh-hcCEEEEEEEEE
Confidence 4699998889999999999999999999999999999999999887777777667788999999999 999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
..|....++.|.|.
T Consensus 85 ~~g~~~~~~~l~V~ 98 (114)
T 2cqv_A 85 KLGSRQAQVNLTVV 98 (114)
T ss_dssp SSCEEECCEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99988887777775
No 366
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.64 E-value=3.2e-15 Score=144.26 Aligned_cols=170 Identities=15% Similarity=0.189 Sum_probs=114.5
Q ss_pred CCeEEecCCcEEEEEEEeCC---CceEEEEECC--EEc-------------------ccCCCEEEEEe--CcEEEEEEcc
Q psy2775 423 QDVKVSRDEKASFEIELTKG---DALVKWYKDG--KEI-------------------AFSENVTLSID--GKKQKLIIFS 476 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~~~-------------------~~~~~~~~~~~--~~~~~L~i~~ 476 (785)
....+.+|++++|.|.+.+. .+.+.|++.. ... ....++.+..+ .....|+|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 87 (221)
T 3m8o_H 8 GGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNS 87 (221)
T ss_dssp SCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECS
T ss_pred CCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECC
Confidence 45678899999999999862 5679999732 110 01256666554 3467899999
Q ss_pred CCCCCcEEEEEEEeecC---cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 477 AGLEDAGEYSCRVGDTG---DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 477 ~~~~d~G~Y~C~a~n~g---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
++.+|+|.|.|.+.|.. .......|.|...+.
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------------------- 122 (221)
T 3m8o_H 88 LKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASP--------------------------------------------- 122 (221)
T ss_dssp CCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCC---------------------------------------------
T ss_pred CCHHHCEEEEEEEECCChhheECCCEEEEEecCCC---------------------------------------------
Confidence 99999999999999852 223445677763210
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEec-CCC-C-ceEEEeCCEEecCCCCeeEE-eeCC----eEEEEEccCCCCC
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKA-SPA-P-SIVWFRNNKPLLSSPKKREI-FDGE----NIILELKEADSET 625 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P~-p-~v~W~~~~~~i~~~~~~~~~-~~~~----~~~L~i~~~~~~~ 625 (785)
.+|.+........ .+|+.++|.|.+.| +|. + .+.|+++|..+......... ..++ .+.|+|..... +
T Consensus 123 ---~~p~v~~~~~~~~-~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~ 197 (221)
T 3m8o_H 123 ---TSPKVFPLSLCST-QPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQC-L 197 (221)
T ss_dssp ---BCCEEEEEECCSC-CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGS-C
T ss_pred ---CCCeEEEecCccc-ccCCCEEEEEEEEeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHc-C
Confidence 0133331111222 78999999999998 776 4 89999999776321111011 1111 23599999888 8
Q ss_pred CceeEEEEEEcCCcceE
Q psy2775 626 DAGDYKVVATNELGSAT 642 (785)
Q Consensus 626 d~G~Y~C~a~n~~g~~~ 642 (785)
|+|.|+|.|.|..|...
T Consensus 198 d~g~ytC~v~~~~~~~~ 214 (221)
T 3m8o_H 198 AGKSVTCHVKHYTNPSQ 214 (221)
T ss_dssp TTCEEEEEEEETTSCCE
T ss_pred CCCeEEEEEEECCCCce
Confidence 99999999999987544
No 367
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.64 E-value=1.4e-15 Score=125.53 Aligned_cols=93 Identities=22% Similarity=0.352 Sum_probs=83.4
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEe-eCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIF-DGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~-~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
.+|.|...+.+..+.+|+.++|.|.+.|.|.|.|.|+|+|..+..+.+..... .++..+|.|.++.. +|+|.|+|.|.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~ 82 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTG-EDSASIMVKAI 82 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCG-GGCEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCc-CCCEEEEEEEE
Confidence 35889888999999999999999999999999999999999998777655443 56778899999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|..|....++.|.|.
T Consensus 83 N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 83 NIAGETSSHAFLLVQ 97 (99)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred ECCCcEEEEEEEEEe
Confidence 999999998888886
No 368
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.64 E-value=2e-16 Score=158.60 Aligned_cols=179 Identities=13% Similarity=0.136 Sum_probs=117.0
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCC--EE---e----------c----CCCCeeEEe-eCCeEEEE
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--KP---L----------L----SSPKKREIF-DGENIILE 617 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~~---i----------~----~~~~~~~~~-~~~~~~L~ 617 (785)
.+.+...+..+.+.+|++++|.|.+.+.|.+.|.|||++ .. + . ...++.... .+...+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 366677778899999999999999998898999999964 11 1 0 023344333 24567899
Q ss_pred EccCCCCCCceeEEEEEEcCCc------ceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccc
Q psy2775 618 LKEADSETDAGDYKVVATNELG------SATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVE 691 (785)
Q Consensus 618 i~~~~~~~d~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (785)
|.+++. +|+|.|.|.|.|..| .....+.|.|.... ...
T Consensus 104 I~~v~~-~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~-----------------------------------~~~ 147 (279)
T 2wbj_D 104 VTSAHP-EDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDL-----------------------------------KNV 147 (279)
T ss_dssp ESSCCG-GGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCG-----------------------------------GGC
T ss_pred EccCCc-cCCEEEEEEEcccccCCccceeeCCCEEEEEecCC-----------------------------------CCC
Confidence 999999 999999999999532 11122456665210 011
Q ss_pred cCCCcCCCCCCcEEeecCCeEEEEEEEecC-CC-CceEEeECCEEeeecccccc----------ch--hhhcccccceee
Q psy2775 692 TAPVIDPPPPPEVLVKKGEDLKIEVRFKAL-PP-PKAEWTVNGTVIVPSKRVKG----------KA--EFIKKLDDLEVK 757 (785)
Q Consensus 692 ~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~-P~-p~i~W~~~~~~~~~~~~~~~----------~~--~~~~~l~~~~v~ 757 (785)
.+|.+....+....+..|+.++|.|.+.|. |+ |.|+|++||..+..+..... .. .....|.+....
T Consensus 148 ~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~ 227 (279)
T 2wbj_D 148 FPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATF 227 (279)
T ss_dssp BCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTT
T ss_pred CCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHH
Confidence 345543322222334579999999999997 54 69999999999876543220 00 111234444444
Q ss_pred eee-ceEEEEEEeccc
Q psy2775 758 ERE-NAVLEVEVTSDK 772 (785)
Q Consensus 758 ~~~-~~~~~c~~~~~~ 772 (785)
..| .+.|+|.|.++.
T Consensus 228 ~~d~~~~YtC~v~n~~ 243 (279)
T 2wbj_D 228 WQNPRNHFRCQVQFYG 243 (279)
T ss_dssp TTCTTCEEEEEEEECC
T ss_pred hccCCCEEEEEEEeCC
Confidence 433 678999999743
No 369
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.64 E-value=3.3e-15 Score=147.40 Aligned_cols=172 Identities=15% Similarity=0.148 Sum_probs=113.8
Q ss_pred CCCeEEecCCcEEEEEEEeC-C--CceEEEEECC--EEcc-----------------cCCCEEEEEe--CcEEEEEEccC
Q psy2775 422 LQDVKVSRDEKASFEIELTK-G--DALVKWYKDG--KEIA-----------------FSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~-~--~~~i~W~~~~--~~~~-----------------~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
+....+.+|++++|.|.+.+ + .+.+.|+|+. ..+. ...++.+..+ .....|+|.++
T Consensus 13 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 92 (261)
T 2xqy_G 13 PGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSL 92 (261)
T ss_dssp CSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCC
Confidence 34667889999999999987 3 4789999863 2110 1246666554 34678999999
Q ss_pred CCCCcEEEEEEEeecCc----ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 478 GLEDAGEYSCRVGDTGD----KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~g~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
+.+|+|.|.|.+.|.+. ....+.|.|...+. .
T Consensus 93 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~----~---------------------------------------- 128 (261)
T 2xqy_G 93 TSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKT----T---------------------------------------- 128 (261)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCC----B----------------------------------------
T ss_pred CcccCeEEEEEEecCCCcceEECCCEEEEEccCCC----C----------------------------------------
Confidence 99999999999998521 11335677765210 0
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeC---CeEEEEEccCCCCCCce
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDG---ENIILELKEADSETDAG 628 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~---~~~~L~i~~~~~~~d~G 628 (785)
+|.+........+.+|+.++|.|.+.|. |.| .|.|++++..+...........+ ..+.|.|..+.. +| |
T Consensus 129 ----~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~~-g 202 (261)
T 2xqy_G 129 ----APSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTW-PS-Q 202 (261)
T ss_dssp ----CCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTT-TT-S
T ss_pred ----CCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEecccc-CC-C
Confidence 1333221112246789999999999985 877 99999998765311111111111 135699998887 78 9
Q ss_pred eEEEEEEcCCcceEE
Q psy2775 629 DYKVVATNELGSATH 643 (785)
Q Consensus 629 ~Y~C~a~n~~g~~~~ 643 (785)
.|+|.|.|.......
T Consensus 203 ~YtC~v~n~~~~~~~ 217 (261)
T 2xqy_G 203 SITCNVAHPASSTKV 217 (261)
T ss_dssp CCEEEEEEGGGTEEE
T ss_pred EEEEEEEECCCCccE
Confidence 999999998765443
No 370
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.64 E-value=1.7e-15 Score=147.84 Aligned_cols=181 Identities=14% Similarity=0.193 Sum_probs=119.0
Q ss_pred ecCCceEecCCCeEEEEEEEEecC----CCeeEEEECCE-----Ec---c----------------CCCCEEEeecCCcc
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP----EPDLLWYYNGE-----PL---Q----------------ETDEVVFSDQSDMH 68 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p----~~~i~W~~~~~-----~~---~----------------~~~~~~~~~~~~~~ 68 (785)
..|..+.+.+|++|+|.|.+.+.+ ...+.||+... .+ . ...|+.+..+..
T Consensus 5 ~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~-- 82 (239)
T 3tv3_H 5 QESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTP-- 82 (239)
T ss_dssp EEESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGG--
T ss_pred ecCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECC--
Confidence 456678999999999999998765 34899998431 11 1 012333332211
Q ss_pred ceEEEEEEcccCCCCCeEEEEEEEcCCe-----------e--EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEE
Q psy2775 69 SYVSIVTIKSIKKREEGVYTVVAKNREG-----------E--AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSV 135 (785)
Q Consensus 69 ~~~~~L~i~~~~~~D~G~Y~C~a~~~~~-----------~--~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C 135 (785)
.....|+|.+++.+|+|.|.|.+.+..+ . ......|.|....+.+|.+........+..|+.+.|.|
T Consensus 83 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C 162 (239)
T 3tv3_H 83 KNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGC 162 (239)
T ss_dssp GTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEE
T ss_pred CCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEE
Confidence 1235699999999999999999986531 1 11224566654455667776444444556799999999
Q ss_pred EEecc-CCC-eEEEeECCEEcccce---EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 136 QVGGE-PSP-KVEWYKDGKLIKDRQ---ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 136 ~~~g~-p~~-~v~W~~~g~~~~~~~---~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
.+.+. |.+ .+.|+++|..+.... ....++ .+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 163 ~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 163 LVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 99874 433 589999987543211 111112 2468899988888 9999999998876665555544
No 371
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.64 E-value=2e-15 Score=124.49 Aligned_cols=93 Identities=22% Similarity=0.484 Sum_probs=86.4
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+|.|...+.+..+.+|+.++|.|.+.|.|.|.+.|+|++..+..+.++.+..++...+|.|.++.. +|+|.|+|.|.|
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~-~d~G~Y~C~a~n 83 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDT-SDSGLYTCTVKN 83 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEEE
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCc-ccCEEEEEEEEe
Confidence 3588988889999999999999999999999999999999999888888888888888999999999 999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
..|....++.|.|+
T Consensus 84 ~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 84 SAGSVSSSCKLTIK 97 (99)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEeEEEEEEEE
Confidence 99999999998886
No 372
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.64 E-value=1.2e-14 Score=140.20 Aligned_cols=170 Identities=15% Similarity=0.170 Sum_probs=115.3
Q ss_pred CceEeccCCcEEEEEEEeccC--CCeEEEeECC--EE---cc---------------cceEE--E--eCCEEEEEEcccC
Q psy2775 121 HDVSITEGESAVLSVQVGGEP--SPKVEWYKDG--KL---IK---------------DRQIT--S--EKNTHTLTLIQCS 174 (785)
Q Consensus 121 ~~~~~~~G~~v~l~C~~~g~p--~~~v~W~~~g--~~---~~---------------~~~~~--~--~~~~~~L~i~~~~ 174 (785)
..+.+.+|+.++|.|.+.+.+ .+.+.|||.. .. +. ..++. . ..+..+|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 466788999999999998765 4689999842 11 10 01111 1 1235789999999
Q ss_pred CCCcEEEEEEEEcCCe----e--EEEEEEEEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeC
Q psy2775 175 TKDKGRYSVKVTNKEG----T--VESAANLNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSIT 248 (785)
Q Consensus 175 ~~d~G~Y~C~a~n~~g----~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 248 (785)
.+|+|.|.|.+.+..| . ....+.|.|.... +.+|.+........+.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~----------------------------~~~P~i~~~~~~~~~~ 139 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS----------------------------ASAPTLFPLVSCENSN 139 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC----------------------------CBCCEEEEEECTTCCC
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEccCC----------------------------CCCCEEEEecCCcccC
Confidence 9999999999998752 1 1233567775321 1335554322223457
Q ss_pred CCCeEEEEEEEccC-CCC-eEEEEE-CCEEcccce---EEEeCC----EEEEEEccCCC--CCCeEEEEEEEeCCCceEE
Q psy2775 249 EGESAVLSVQVGGE-PSP-KVEWYK-DGKLIKDRQ---ITSEKN----THTLTLIQCST--KDKGRYSVKVTNKEGTVES 316 (785)
Q Consensus 249 ~G~~~~l~C~~~g~-p~~-~v~W~~-~~~~l~~~~---~~~~~~----~~~l~i~~~~~--~d~G~Y~C~~~n~~g~~~~ 316 (785)
+|+.++|.|.+.+. |.+ .+.|++ +|..+.... ....++ .+.|.|..... +|.|.|+|.|.|..+....
T Consensus 140 ~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~ 219 (223)
T 1dee_B 140 PSSTVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEK 219 (223)
T ss_dssp SSSEEEEEEEEEEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEE
T ss_pred CCCcEEEEEEEEEEeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCcc
Confidence 89999999999876 766 999999 888775310 000112 34688887776 8899999999999887665
Q ss_pred EE
Q psy2775 317 AA 318 (785)
Q Consensus 317 ~~ 318 (785)
..
T Consensus 220 ~~ 221 (223)
T 1dee_B 220 DV 221 (223)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 373
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.64 E-value=8.5e-16 Score=124.90 Aligned_cols=90 Identities=21% Similarity=0.274 Sum_probs=78.6
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCC--EEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--KPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
+|.|...+....+.+|+.++|.|.+.|+|.|.|+|+|++ ..+... ..........+|.|.++.. +|+|.|+|.|.
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~ 78 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDAKSSTTSIFFPSAKR-ADSGNYKLKVK 78 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEEETTEEEEECTTBCG-GGCEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEecCCEEEEEECCCCh-hcCEEEEEEEE
Confidence 588888888999999999999999999999999999999 877544 3344456678899999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|..|....++.|.|+
T Consensus 79 N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 79 NELGEDEAIFEVIVQ 93 (93)
T ss_dssp ETTEEEEEEEEEEEC
T ss_pred cCCCeEEEEEEEEEC
Confidence 999998888888773
No 374
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.64 E-value=1.5e-15 Score=147.77 Aligned_cols=180 Identities=14% Similarity=0.195 Sum_probs=115.2
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCee--EEEECCE-----Ec-----cC-----------CCCEEEeecCCccceEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVP--EPDL--LWYYNGE-----PL-----QE-----------TDEVVFSDQSDMHSYVS 72 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p--~~~i--~W~~~~~-----~~-----~~-----------~~~~~~~~~~~~~~~~~ 72 (785)
.|..+.+.+|++|+|.|.+.+.+ ...+ .||+... .+ .. ..|+.+..+... ...
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~ 83 (232)
T 3qhz_H 6 ESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSK--SQV 83 (232)
T ss_dssp EECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTT--TEE
T ss_pred cCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCC--CEE
Confidence 45568899999999999997642 2344 9998421 11 00 134444433222 235
Q ss_pred EEEEcccCCCCCeEEEEEEEcCC--------eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEeccCC--
Q psy2775 73 IVTIKSIKKREEGVYTVVAKNRE--------GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGEPS-- 142 (785)
Q Consensus 73 ~L~i~~~~~~D~G~Y~C~a~~~~--------~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~p~-- 142 (785)
+|+|.+++.+|+|.|.|.+.+.. ........|.|....+.+|.+........+..|+.+.|.|.+.+.++
T Consensus 84 sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~ 163 (232)
T 3qhz_H 84 VLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 163 (232)
T ss_dssp EEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSC
T ss_pred EEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCC
Confidence 69999999999999999999763 12223345667544556677764334445667999999999987543
Q ss_pred CeEEEeECCEEcccce---EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 143 PKVEWYKDGKLIKDRQ---ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 143 ~~v~W~~~g~~~~~~~---~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
..+.|+++|..+.... ....++ .+.|.|.....+| |.|+|.|.|..+.......|.+
T Consensus 164 ~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 164 VTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp CEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred eEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 3688999986543211 111111 2468899888888 9999999998877666665554
No 375
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.63 E-value=7.4e-15 Score=142.55 Aligned_cols=180 Identities=17% Similarity=0.207 Sum_probs=114.4
Q ss_pred CCeEEecCCcEEEEEEEeCC---CceEEEEECC--EE---c-------------ccCCCEEEEEe--CcEEEEEEccCCC
Q psy2775 423 QDVKVSRDEKASFEIELTKG---DALVKWYKDG--KE---I-------------AFSENVTLSID--GKKQKLIIFSAGL 479 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~~---~-------------~~~~~~~~~~~--~~~~~L~i~~~~~ 479 (785)
....+.+|++++|.|.+.+. .+.+.|+|.. .. + ....++.+..+ +....|+|.+++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (232)
T 1dn0_B 8 GAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA 87 (232)
T ss_dssp CCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCc
Confidence 44678899999999999873 4679999842 21 1 01356666654 3467899999999
Q ss_pred CCcEEEEEEEeec-C--c----ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCC
Q psy2775 480 EDAGEYSCRVGDT-G--D----KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPL 552 (785)
Q Consensus 480 ~d~G~Y~C~a~n~-g--~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 552 (785)
+|+|.|.|.+.+. + . ....+.|.|...+.
T Consensus 88 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~-------------------------------------------- 123 (232)
T 1dn0_B 88 ADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSA-------------------------------------------- 123 (232)
T ss_dssp GGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCC--------------------------------------------
T ss_pred ccCEEEEEEEecCCcCCchhhhcccceEEEEccCCC--------------------------------------------
Confidence 9999999999842 2 1 12345777765210
Q ss_pred CCCCCCCeEeeeeeeeeeeec-CeEEEEEEEecC-CCC-ceEEEe-CCEEecCCCCeeEEeeCC----eEEEEEccCCCC
Q psy2775 553 GSPGQAPLFIERFEEKTVKEK-GTIRLMAKVKAS-PAP-SIVWFR-NNKPLLSSPKKREIFDGE----NIILELKEADSE 624 (785)
Q Consensus 553 ~~~~~~p~~~~~~~~~~v~~g-~~v~l~C~~~g~-P~p-~v~W~~-~~~~i~~~~~~~~~~~~~----~~~L~i~~~~~~ 624 (785)
.+|.+........+.+| +.++|.|.+.|. |.| .|.|++ ||..+...........++ .+.|.|......
T Consensus 124 ----~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~ 199 (232)
T 1dn0_B 124 ----SAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVM 199 (232)
T ss_dssp ----BCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC-
T ss_pred ----CCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhc
Confidence 01333221112234578 999999999986 887 999999 998875400000001122 246888776410
Q ss_pred -CCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 625 -TDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 625 -~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+|.|.|+|.|.|..|.......|.|.
T Consensus 200 ~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 200 AGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp --CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred ccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 36899999999999987766665554
No 376
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.63 E-value=5.1e-17 Score=155.74 Aligned_cols=177 Identities=15% Similarity=0.137 Sum_probs=115.2
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCC---CeeEEEECCEEccCCC-CEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPE---PDLLWYYNGEPLQETD-EVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~---~~i~W~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
.|..+...|..+.+.+|++++|.|.+.|.++ +.|.| ++..+.... ........+.....+.|+|.+++.+|+|.
T Consensus 3 ~p~v~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~ 80 (214)
T 1ow0_A 3 HPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKT 80 (214)
T ss_dssp CCCCEEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCE
T ss_pred CCEEEEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCe
Confidence 3444466788999999999999999988754 68999 444432210 00000111222345679999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEeCCCCCCCceec-CCCceEeccCCcEEEEEEEecc-CC-CeEEEeECCEEcccce-----
Q psy2775 87 YTVVAKNREGEAKMDIPVKVNTGKPEKPSILE-PLHDVSITEGESAVLSVQVGGE-PS-PKVEWYKDGKLIKDRQ----- 158 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g~-p~-~~v~W~~~g~~~~~~~----- 158 (785)
|+|.|.|..+.......+.+ .....+|.+.. ++....+..|+.+.|.|.+.|. |+ +.|+|+|||..+....
T Consensus 81 Y~C~~~~~~~~~~~~~~i~~-~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~ 159 (214)
T 1ow0_A 81 FTCTAAYPESKTPLTATLSK-SGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWA 159 (214)
T ss_dssp EEEEECCSSCSSCEEEEEEC-CSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECC
T ss_pred EEEEEecCCCCCceeEeecc-CCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecC
Confidence 99999987653222223322 12335676643 3333346789999999999885 43 4999999999986542
Q ss_pred -EEE---eCCE----EEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 159 -ITS---EKNT----HTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 159 -~~~---~~~~----~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
... .++. ..|.|.....+|.|.|+|.|.|...
T Consensus 160 ~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 160 SRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp CEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred CcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 111 2221 2345555444568999999999763
No 377
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.63 E-value=1.3e-15 Score=150.37 Aligned_cols=170 Identities=12% Similarity=0.195 Sum_probs=114.0
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EE---c---cCC---------C-CEEEeecCCccceEEEEEE
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EP---L---QET---------D-EVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~---~---~~~---------~-~~~~~~~~~~~~~~~~L~i 76 (785)
+...|..+.+.+|++++|.|.+.+.+.+.+.|||.. .. + ... . ++.+...... . |+|
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~----~-L~I 78 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDT----E-LRL 78 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSS----C-CEE
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCC----e-EEE
Confidence 455688899999999999999888888899999832 10 0 000 1 2222222211 1 999
Q ss_pred cccCCCCCeEEEEEEEcCCe------eEEEEeeEEEeCC--CCCCCceec-CCCceEeccCCcEEEEEEEec-cCCC-eE
Q psy2775 77 KSIKKREEGVYTVVAKNREG------EAKMDIPVKVNTG--KPEKPSILE-PLHDVSITEGESAVLSVQVGG-EPSP-KV 145 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~------~~~~~~~v~v~~~--~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g-~p~~-~v 145 (785)
.+++.+|+|.|+|.+.+..+ .......|.|... ...+|.+.. .+....+..|+.++|.|.+.| .|++ .+
T Consensus 79 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v 158 (253)
T 3to4_D 79 QVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 158 (253)
T ss_dssp EEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred ccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEE
Confidence 99999999999999986543 1122335566531 224555543 223334446789999999988 5666 89
Q ss_pred EEeECCEEcccceEEE----------eCC----EEEEEEcccCCCC-cEEEEEEEEcCC
Q psy2775 146 EWYKDGKLIKDRQITS----------EKN----THTLTLIQCSTKD-KGRYSVKVTNKE 189 (785)
Q Consensus 146 ~W~~~g~~~~~~~~~~----------~~~----~~~L~i~~~~~~d-~G~Y~C~a~n~~ 189 (785)
+|++||..+....... .++ .+.|.|.....+| .|.|+|.|.|..
T Consensus 159 ~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 159 SWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 9999999986543211 122 2468888877777 789999999864
No 378
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.63 E-value=1.3e-15 Score=149.68 Aligned_cols=171 Identities=14% Similarity=0.142 Sum_probs=100.4
Q ss_pred CCeEEecCCcEEEEEEEeCC---CceEEEEECC--EEc-----------------ccCCCEEEEEe--CcEEEEEEccCC
Q psy2775 423 QDVKVSRDEKASFEIELTKG---DALVKWYKDG--KEI-----------------AFSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~~~-----------------~~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
....+.+|++++|.|.+.+. .+.+.|++.. ..+ ....++.+..+ .....|+|.+++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (257)
T 3bn9_D 8 GGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLR 87 (257)
T ss_dssp CCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCC
T ss_pred CCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCC
Confidence 35678899999999999873 4679999853 111 01346666654 356789999999
Q ss_pred CCCcEEEEEEEeec-Cc---------c----eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeec
Q psy2775 479 LEDAGEYSCRVGDT-GD---------K----ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNL 544 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~-g~---------~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 544 (785)
.+|+|.|.|.+.|. |. . .....|.|...+.
T Consensus 88 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~------------------------------------ 131 (257)
T 3bn9_D 88 AEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAST------------------------------------ 131 (257)
T ss_dssp GGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCC------------------------------------
T ss_pred hhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCC------------------------------------
Confidence 99999999999986 31 1 1235677764210
Q ss_pred ccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeCC----eEEEEE
Q psy2775 545 FIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDGE----NIILEL 618 (785)
Q Consensus 545 ~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~~----~~~L~i 618 (785)
.+|.+........+.+|+.++|.|.+.|. |.| .|.|+|++..+...........++ .+.|.|
T Consensus 132 ------------~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I 199 (257)
T 3bn9_D 132 ------------KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTV 199 (257)
T ss_dssp ------------BCCEECCCCC-----------CCCEEEEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCC
T ss_pred ------------cCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEE
Confidence 01333221112235689999999999986 887 999999987642111111111222 245888
Q ss_pred ccCCCCCCceeEEEEEEcCCcceEE
Q psy2775 619 KEADSETDAGDYKVVATNELGSATH 643 (785)
Q Consensus 619 ~~~~~~~d~G~Y~C~a~n~~g~~~~ 643 (785)
.++.. +| |.|+|.|.|..+....
T Consensus 200 ~~~~~-~~-g~YtC~v~n~~~~~~~ 222 (257)
T 3bn9_D 200 PSSSL-GT-QTYICNVNHKPSNTKV 222 (257)
T ss_dssp C---------CEEEEEEEGGGTEEE
T ss_pred ccccc-CC-CeEEEEEEecCCCcCE
Confidence 88876 67 9999999997665443
No 379
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.63 E-value=1.9e-16 Score=151.01 Aligned_cols=163 Identities=16% Similarity=0.214 Sum_probs=95.9
Q ss_pred eecCeEEEEEEEecCCC----CceEEEeCCEEecCCCC-eeEEeeCCeE----EEEEccCCCCCCceeEEEEEEcCCcce
Q psy2775 571 KEKGTIRLMAKVKASPA----PSIVWFRNNKPLLSSPK-KREIFDGENI----ILELKEADSETDAGDYKVVATNELGSA 641 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~P~----p~v~W~~~~~~i~~~~~-~~~~~~~~~~----~L~i~~~~~~~d~G~Y~C~a~n~~g~~ 641 (785)
.+|++++|.|.+.|.|+ +.|+|+|++.++..... ......++.. .|.|..... +|+|.|+|.|.|..|..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~-~d~g~Y~C~a~n~~~~~ 94 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDW-LNGKEYKCKVSNKALPA 94 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHH-HTTCCEEEEEECTTSSS
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHc-cCCceEEEEEEcCcCCc
Confidence 79999999999999753 39999999988754321 1112222322 233333333 45999999999998865
Q ss_pred EEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeEEEEEEEecC
Q psy2775 642 THGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDLKIEVRFKAL 721 (785)
Q Consensus 642 ~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~~l~C~~~g~ 721 (785)
..+..+.+. ..+..+|.+.........+ .|..++|.|.+.|+
T Consensus 95 ~~~~~v~~~-------------------------------------~~~~~~P~v~~~~~~~~~~-~~~~~~L~C~~~g~ 136 (207)
T 1l6x_A 95 PIEKTISKA-------------------------------------KGQPREPQVYTLPPSRDEL-TKNQVSLTCLVKGF 136 (207)
T ss_dssp CEEEEECCC-------------------------------------CSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEE
T ss_pred ceEEEeccC-------------------------------------CCCCcCCEEEEECCChHHh-cCCcEEEEEEEeCe
Confidence 333332210 0112344443222221112 46669999999995
Q ss_pred -CCC-ceEEeECCEEeeecccccc--chhh-hcccccceeee---eeceEEEEEEeccc
Q psy2775 722 -PPP-KAEWTVNGTVIVPSKRVKG--KAEF-IKKLDDLEVKE---RENAVLEVEVTSDK 772 (785)
Q Consensus 722 -P~p-~i~W~~~~~~~~~~~~~~~--~~~~-~~~l~~~~v~~---~~~~~~~c~~~~~~ 772 (785)
|++ .|+|++||..+........ ..+- ........+.. .|.|.|+|.+.++.
T Consensus 137 ~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~ 195 (207)
T 1l6x_A 137 YPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 195 (207)
T ss_dssp BSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred ECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCC
Confidence 543 8999999999864332211 1110 01111123333 35899999999854
No 380
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.63 E-value=3.4e-15 Score=145.79 Aligned_cols=171 Identities=14% Similarity=0.196 Sum_probs=113.3
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCE--E---cc------------CCCCEEEeecCCccceEEEEEEc
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGE--P---LQ------------ETDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~--~---~~------------~~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
+...|..+.+.+|++++|.|.+. .+.+.+.|+|++. . +. ...++.+..+. ....+|+|.
T Consensus 2 v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~---~~~~~L~I~ 77 (238)
T 1bec_A 2 VTQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPS---QEQFSLILE 77 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCS---SSEEEEEES
T ss_pred cccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecC---CCEEEEEEe
Confidence 45678899999999999999985 4678999998641 1 10 12233332211 123579999
Q ss_pred ccCCCCCeEEEEEEEcCCe-----eEEEEeeEEEeCC--CCCCCceec-CCCceEeccCCcEEEEEEEecc-CCC-eEEE
Q psy2775 78 SIKKREEGVYTVVAKNREG-----EAKMDIPVKVNTG--KPEKPSILE-PLHDVSITEGESAVLSVQVGGE-PSP-KVEW 147 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~~-----~~~~~~~v~v~~~--~~~~p~i~~-~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~W 147 (785)
+++.+|+|.|.|.+.+..+ .......|.|... .+.+|.+.. .+....+..|+.+.|.|.+.|. |.+ .|.|
T Consensus 78 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W 157 (238)
T 1bec_A 78 LATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSW 157 (238)
T ss_dssp SCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEE
T ss_pred cCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEE
Confidence 9999999999999998731 1112345666532 123566543 3344456689999999999885 654 9999
Q ss_pred eECCEEcccceE------EEeCCE----EEEEEcccCCC-CcEEEEEEEEcCC
Q psy2775 148 YKDGKLIKDRQI------TSEKNT----HTLTLIQCSTK-DKGRYSVKVTNKE 189 (785)
Q Consensus 148 ~~~g~~~~~~~~------~~~~~~----~~L~i~~~~~~-d~G~Y~C~a~n~~ 189 (785)
++||..+..... ...++. ..|.|...... +.|.|+|.|.|..
T Consensus 158 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~ 210 (238)
T 1bec_A 158 WVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHG 210 (238)
T ss_dssp EETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECC
T ss_pred EECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCC
Confidence 999998865421 122232 23445444443 4688999999864
No 381
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.62 E-value=2.4e-15 Score=157.36 Aligned_cols=178 Identities=11% Similarity=0.153 Sum_probs=121.6
Q ss_pred CeeeecCCceE-ecCCCeEEEEEEEEec---CC-CeeEEEECCEEccCCCC-EEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 13 PTFSKKTKPVY-AEENSEVTLEVRLVAV---PE-PDLLWYYNGEPLQETDE-VVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 13 p~~~~~~~~~~-v~~G~~v~l~C~~~g~---p~-~~i~W~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
..+...|.... +.+|++++|.|.+.|. |. ..|.|++++..+..... ......++.....+.|+|..++.+|+|.
T Consensus 168 ~v~~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~ 247 (376)
T 2aty_A 168 SVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKE 247 (376)
T ss_pred EEEEeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCE
Confidence 34455666555 8999999999999887 32 37999999866532211 1111122333345679999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-C-CCeEEEeECCEEcccceE----E
Q psy2775 87 YTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-P-SPKVEWYKDGKLIKDRQI----T 160 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p-~~~v~W~~~g~~~~~~~~----~ 160 (785)
|+|.+.+..+.......+.+......+|.+...+.......|+.++|.|.+.|+ | .+.|+|+|||..+..... .
T Consensus 248 Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~ 327 (376)
T 2aty_A 248 FKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIM 327 (376)
T ss_pred EEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceE
Confidence 999999886643333333222233467777766555555669999999999986 3 458999999998754321 1
Q ss_pred EeCC----EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 161 SEKN----THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 161 ~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
..++ ...|.|.....+|.|.|+|+|.|...
T Consensus 328 ~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 328 NTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred CCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 1121 24577887778889999999998753
No 382
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.62 E-value=2.3e-15 Score=147.37 Aligned_cols=182 Identities=13% Similarity=0.169 Sum_probs=117.9
Q ss_pred eecCCceEecCCCeEEEEEEEEec--CCCeeEEEECCE-----Ec---c-----------CCCCEEEeecCCccceEEEE
Q psy2775 16 SKKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNGE-----PL---Q-----------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 16 ~~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~~-----~~---~-----------~~~~~~~~~~~~~~~~~~~L 74 (785)
+..|..+.+.+|++|+|.|.+.+. +...+.||+... .+ . ...|+.+..+.. ....+|
T Consensus 3 l~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL 80 (248)
T 3u2s_H 3 LVESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNS--KDTLYL 80 (248)
T ss_dssp EEEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGG--GTEEEE
T ss_pred eecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCC--CCEEEE
Confidence 356778999999999999999763 346899998421 11 0 123444433221 123569
Q ss_pred EEcccCCCCCeEEEEEEEcCC----------------------eeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEE
Q psy2775 75 TIKSIKKREEGVYTVVAKNRE----------------------GEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAV 132 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~~----------------------~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~ 132 (785)
+|.+++.+|+|.|.|.+.+.. ........|.|....+.+|.+........+..|+.+.
T Consensus 81 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~ 160 (248)
T 3u2s_H 81 QMNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAA 160 (248)
T ss_dssp EECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEE
T ss_pred EECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEE
Confidence 999999999999999998742 1112234667765555667776444444556799999
Q ss_pred EEEEEecc-C-CCeEEEeECCEEcccce---EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 133 LSVQVGGE-P-SPKVEWYKDGKLIKDRQ---ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 133 l~C~~~g~-p-~~~v~W~~~g~~~~~~~---~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
|.|.+.+. | +..+.|+++|..+.... ....++ .+.|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 161 L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 161 LGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEEeeEECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 99999874 4 45799999986542211 111111 3468888888888 9999999998876655555444
No 383
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.62 E-value=1.6e-15 Score=148.11 Aligned_cols=181 Identities=15% Similarity=0.205 Sum_probs=113.2
Q ss_pred eeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCC--EE---ec------------CCCCeeEEe-eCCeEEEEEccCCC
Q psy2775 562 IERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--KP---LL------------SSPKKREIF-DGENIILELKEADS 623 (785)
Q Consensus 562 ~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~~---i~------------~~~~~~~~~-~~~~~~L~i~~~~~ 623 (785)
...+..+.+.+|++++|.|.+. .+.+.+.|||++ .. +. ...++.... .+..++|.|.+++.
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred ccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 3445677899999999999995 467899999964 11 10 123333332 24567899999999
Q ss_pred CCCceeEEEEEEcCCc---ce--EEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCC
Q psy2775 624 ETDAGDYKVVATNELG---SA--THGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDP 698 (785)
Q Consensus 624 ~~d~G~Y~C~a~n~~g---~~--~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~ 698 (785)
+|+|.|.|.+.|..+ .. .....|.|.... ....+|.+..
T Consensus 82 -~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-----------------------------------~~~~~P~v~~ 125 (238)
T 1bec_A 82 -SQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDL-----------------------------------RQVTPPKVSL 125 (238)
T ss_dssp -GGCEEEEEEEESCTTCGGGCEECCCEEEEEESCG-----------------------------------GGCBCCEEEE
T ss_pred -ccCEEEEEEEecCCCCccccccCCCEEEEEeccC-----------------------------------CCCCCCceEE
Confidence 999999999999752 11 122456665210 0112444432
Q ss_pred CCCCcEEeecCCeEEEEEEEecC-CCC-ceEEeECCEEeeeccccc---c---chh--hhcccccceeeeee-ceEEEEE
Q psy2775 699 PPPPEVLVKKGEDLKIEVRFKAL-PPP-KAEWTVNGTVIVPSKRVK---G---KAE--FIKKLDDLEVKERE-NAVLEVE 767 (785)
Q Consensus 699 ~~~~~~~~~~g~~~~l~C~~~g~-P~p-~i~W~~~~~~~~~~~~~~---~---~~~--~~~~l~~~~v~~~~-~~~~~c~ 767 (785)
..+....+..|+.++|.|.+.|. |+| .|.|++||..+..+.+.. . ... ....|.+......| .+.|+|.
T Consensus 126 ~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~ 205 (238)
T 1bec_A 126 FEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQ 205 (238)
T ss_dssp ECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEE
T ss_pred ECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEE
Confidence 22222335679999999999996 765 999999999987664322 1 011 11233333222223 5789999
Q ss_pred Eecccc--eeEEee
Q psy2775 768 VTSDKA--DVKWFK 779 (785)
Q Consensus 768 ~~~~~~--~~~w~~ 779 (785)
+.++.. .+.|.+
T Consensus 206 v~~~~l~~~~~~~~ 219 (238)
T 1bec_A 206 VQFHGLSEEDKWPE 219 (238)
T ss_dssp EEECCCCTTCCCCT
T ss_pred EEcCCCCCCcEecC
Confidence 997432 255654
No 384
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.62 E-value=2.9e-15 Score=120.82 Aligned_cols=88 Identities=22% Similarity=0.215 Sum_probs=78.8
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+|.|+..+++..+.+|++++|.|.+.+ |+|.|+|+|||.++..+.++.+..++...+|.|.++.. +|+|.|+|.|.|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~-~D~G~Y~C~a~n 81 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQL-GMTGEVSFQAAN 81 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCG-GGCEEEEEEETT
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCCh-hhCEEEEEEECC
Confidence 4689999999999999999999999986 55889999999999888888888888888999999999 999999999988
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
. ..++.|.|+
T Consensus 82 ~----~~sa~L~V~ 91 (93)
T 1waa_A 82 T----KSAANLKVK 91 (93)
T ss_dssp E----EEEEEEEEE
T ss_pred C----cEEEEEEEE
Confidence 4 457788876
No 385
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.62 E-value=8.8e-15 Score=144.21 Aligned_cols=178 Identities=13% Similarity=0.116 Sum_probs=116.6
Q ss_pred CCeEEecCCcEEEEEEEeCC---CceEEEEECC--E---Ec--------------ccCCCEEEEEe--CcEEEEEEccCC
Q psy2775 423 QDVKVSRDEKASFEIELTKG---DALVKWYKDG--K---EI--------------AFSENVTLSID--GKKQKLIIFSAG 478 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~---~~--------------~~~~~~~~~~~--~~~~~L~i~~~~ 478 (785)
..+.+.+|++++|.|.+.+. ...+.|+|.. . .+ ...+++.+..+ .....|+|.+++
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (253)
T 3liz_H 8 GGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLK 87 (253)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCC
T ss_pred CCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 45678899999999999862 5579999842 1 11 11245666554 346789999999
Q ss_pred CCCcEEEEEEEeecC-----cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCC
Q psy2775 479 LEDAGEYSCRVGDTG-----DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLG 553 (785)
Q Consensus 479 ~~d~G~Y~C~a~n~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~ 553 (785)
.+|+|.|.|.+.|.+ .......|.|....
T Consensus 88 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------------------- 121 (253)
T 3liz_H 88 SEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK---------------------------------------------- 121 (253)
T ss_dssp GGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC----------------------------------------------
T ss_pred hhhCEEEEEEEecCCcceeeEECCCEEEEEeccC----------------------------------------------
Confidence 999999999999852 11233567776311
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecCCCCeeEEeeC---CeEEEEEccCCCCCCce
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLSSPKKREIFDG---ENIILELKEADSETDAG 628 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~~~~~~~~~~~---~~~~L~i~~~~~~~d~G 628 (785)
..+|.+........+.+|+.++|.|.+.| +|.+ .+.|++++..+...........+ ..+.|.|..... +| |
T Consensus 122 --~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~-~d-g 197 (253)
T 3liz_H 122 --TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTW-PS-E 197 (253)
T ss_dssp --CBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTST-TT-S
T ss_pred --CCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHC-CC-c
Confidence 01144443333345667999999999998 6877 89999998743110000011111 125699999988 88 9
Q ss_pred eEEEEEEcCCcceEEEEEEEEE
Q psy2775 629 DYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 629 ~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.|+|.|.|..+.......|.+.
T Consensus 198 ~ytC~v~~~~~~~~~~~~~~~~ 219 (253)
T 3liz_H 198 TVTCNVAHPASSTKVDKKIVPR 219 (253)
T ss_dssp CCEEEEEEGGGTEEEEEECCCC
T ss_pred eEEEEEEECCCCcceEEEecCc
Confidence 9999999999987776666554
No 386
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.61 E-value=6.6e-15 Score=145.08 Aligned_cols=174 Identities=15% Similarity=0.222 Sum_probs=116.0
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--E--E-cc------------CCCCEEEeecCCccceEEEEE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--E--P-LQ------------ETDEVVFSDQSDMHSYVSIVT 75 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~--~-~~------------~~~~~~~~~~~~~~~~~~~L~ 75 (785)
+.+...|..+.+.+|++++|.|.+. .+.+.+.||++. . . +. ...++.+..... ....|+
T Consensus 4 ~~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~---~~~~L~ 79 (252)
T 1oga_E 4 GGITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKK---ESFPLT 79 (252)
T ss_dssp -CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSST---TBCCEE
T ss_pred ccceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCC---CEEEEE
Confidence 4566778899999999999999985 457899999853 1 1 10 123444432211 113599
Q ss_pred EcccCCCCCeEEEEEEEcCC---eeEEEEeeEEEeCC--CCCCCceecC-CCceEeccCCcEEEEEEEecc-CC-CeEEE
Q psy2775 76 IKSIKKREEGVYTVVAKNRE---GEAKMDIPVKVNTG--KPEKPSILEP-LHDVSITEGESAVLSVQVGGE-PS-PKVEW 147 (785)
Q Consensus 76 i~~~~~~D~G~Y~C~a~~~~---~~~~~~~~v~v~~~--~~~~p~i~~~-~~~~~~~~G~~v~l~C~~~g~-p~-~~v~W 147 (785)
|.+++.+|+|.|.|.+.+.. ........|.|... ...+|.+... +....+..|+.+.|.|.+.|. |. +.|+|
T Consensus 80 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W 159 (252)
T 1oga_E 80 VTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 159 (252)
T ss_dssp ECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred ECcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEE
Confidence 99999999999999999861 11122334666531 1246666542 334455679999999999885 64 49999
Q ss_pred eECCEEcccceEEE----------eCC----EEEEEEcccCC-CCcEEEEEEEEcCCe
Q psy2775 148 YKDGKLIKDRQITS----------EKN----THTLTLIQCST-KDKGRYSVKVTNKEG 190 (785)
Q Consensus 148 ~~~g~~~~~~~~~~----------~~~----~~~L~i~~~~~-~d~G~Y~C~a~n~~g 190 (785)
++||..+....... .++ .+.|.|..... +|.|.|+|.|.|...
T Consensus 160 ~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 217 (252)
T 1oga_E 160 WVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 217 (252)
T ss_dssp EETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred EECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 99999886543211 122 23477776655 468899999998754
No 387
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=2e-15 Score=123.92 Aligned_cols=90 Identities=22% Similarity=0.263 Sum_probs=81.1
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
..+|.|...+.++.+.+|++++|.|.+ .|.|.++|+|||..+..+.++.+..++...+|.|.++.. +|+|.|+|.|.
T Consensus 5 ~~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~-~D~G~Y~C~a~ 81 (100)
T 2yuz_A 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALT-EDEGDYVFAPD 81 (100)
T ss_dssp SCCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCG-GGCSEEEEEES
T ss_pred CCCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCCh-hhCEEEEEEEc
Confidence 346889999999999999999999999 899999999999999988888888888888999999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|. ....++.|.|.
T Consensus 82 N~--~~~~~a~L~V~ 94 (100)
T 2yuz_A 82 AY--NVTLPAKVHVI 94 (100)
T ss_dssp SS--CCCEEEEEEEE
T ss_pred CC--CeeEEEEEEEe
Confidence 98 45667777776
No 388
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.61 E-value=9.5e-15 Score=141.70 Aligned_cols=179 Identities=12% Similarity=0.197 Sum_probs=119.9
Q ss_pred cCCceEecCCCeEEEEEEEEec--CCCeeEEEECCE-----Ec---c-----------CCCCEEEeecCCccceEEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNGE-----PL---Q-----------ETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~~-----~~---~-----------~~~~~~~~~~~~~~~~~~~L~i 76 (785)
.|..+.+.+|++|+|.|.+.+. ....+.||+... .+ . ...|+.+..+... ....|+|
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~--~~~sL~I 83 (230)
T 3n9g_H 6 QSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTST--STVYMEL 83 (230)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTT--TEEEEEE
T ss_pred ecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCC--CEEEEEE
Confidence 3457899999999999999763 346799998421 11 0 1234444433322 2356999
Q ss_pred cccCCCCCeEEEEEEEcCC-----e-e--EEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-C-CCeEE
Q psy2775 77 KSIKKREEGVYTVVAKNRE-----G-E--AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-P-SPKVE 146 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~-----~-~--~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p-~~~v~ 146 (785)
.+++.+|+|.|.|.+.+.. + . ......|.|......+|.+........+..|+.+.|.|.+.+. | .+.+.
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~ 163 (230)
T 3n9g_H 84 SSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVS 163 (230)
T ss_dssp CSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEE
T ss_pred CCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEE
Confidence 9999999999999998754 1 1 1123457776545566777643344445689999999999874 4 34799
Q ss_pred EeECCEEcccce-----EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 147 WYKDGKLIKDRQ-----ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 147 W~~~g~~~~~~~-----~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
| +|..+.... ....++ .+.|.|.....+| |.|+|.|.|..+.......+.|.
T Consensus 164 W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 164 W--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp E--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred E--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 9 655543221 111111 3478899998899 99999999988766666666554
No 389
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.60 E-value=4.4e-16 Score=150.76 Aligned_cols=197 Identities=14% Similarity=0.209 Sum_probs=105.0
Q ss_pred eEEEEEEeccceEEEEEE-EecCCcccccCCCeE-EecCCcEEEEEEEeCCC--c---eEEEEECCEEcccCCCE--EEE
Q psy2775 394 GEYTCSLPDQETSAELNV-VELPPEISVPLQDVK-VSRDEKASFEIELTKGD--A---LVKWYKDGKEIAFSENV--TLS 464 (785)
Q Consensus 394 G~Y~C~a~n~~~~~~~~v-~~~~~~~~~~~~~~~-v~~g~~~~l~C~~~~~~--~---~i~W~~~~~~~~~~~~~--~~~ 464 (785)
|.|.|...|..+.-.-.. ...|..+..++.... +..|+.++|.|.+.+.. | .|+|+++|.++...... ...
T Consensus 1 ~~~~~~~~~~~~~c~~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~ 80 (240)
T 4acp_A 1 GTKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQ 80 (240)
T ss_dssp ----------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC
T ss_pred CceeeeeeecCCCCCccccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceEC
Confidence 678888887654321111 222333334444444 55699999999999832 3 69999999987442110 111
Q ss_pred EeCc---EEEEEEccCCCCCcEEEEEEEeec-CcceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeE
Q psy2775 465 IDGK---KQKLIIFSAGLEDAGEYSCRVGDT-GDKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVK 540 (785)
Q Consensus 465 ~~~~---~~~L~i~~~~~~d~G~Y~C~a~n~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (785)
.++. .+.|.|.....+|.|.|+|+|.|. +.......+..... ...
T Consensus 81 ~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~----~~~--------------------------- 129 (240)
T 4acp_A 81 YNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKG----QPR--------------------------- 129 (240)
T ss_dssp ---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCS----CCB---------------------------
T ss_pred CCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCC----CCC---------------------------
Confidence 1221 357888877778899999999996 32222222221000 001
Q ss_pred EeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEec-CCCC-ceEEEeCCEEecCCCCeeEEee-CC----e
Q psy2775 541 WLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKA-SPAP-SIVWFRNNKPLLSSPKKREIFD-GE----N 613 (785)
Q Consensus 541 W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g-~P~p-~v~W~~~~~~i~~~~~~~~~~~-~~----~ 613 (785)
+|.+..........+|+.++|.|.+.| +|.+ .|.|+|||.++..........+ ++ .
T Consensus 130 -----------------~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~ 192 (240)
T 4acp_A 130 -----------------EPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLY 192 (240)
T ss_dssp -----------------CCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEE
T ss_pred -----------------CCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEE
Confidence 133333222223335899999999999 4665 8999999998743211111111 22 2
Q ss_pred EEEEEccCCCCCCceeEEEEEEcCCc
Q psy2775 614 IILELKEADSETDAGDYKVVATNELG 639 (785)
Q Consensus 614 ~~L~i~~~~~~~d~G~Y~C~a~n~~g 639 (785)
+.|.|..... +|.|.|+|.|.|..-
T Consensus 193 s~L~v~~~~~-~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 193 SKLTVDKSRW-QQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEEEEEHHHH-HTTCCEEEEEECTTS
T ss_pred EEEEEChHHh-CCCCEEEEEEEECCC
Confidence 4567766544 578999999999864
No 390
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.60 E-value=4.2e-15 Score=124.58 Aligned_cols=94 Identities=32% Similarity=0.348 Sum_probs=85.7
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
..+|.|...+....+.+|+.++|.|.+.|.|.|.+.|+|++..+..+.++.+..++...+|.|.++.. +|+|.|+|.|.
T Consensus 11 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~ 89 (107)
T 3irg_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALP-TDAGVYVCRAR 89 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCG-GGCEEEEEEEE
T ss_pred CCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCH-HhCEEEEEEEE
Confidence 34689998889999999999999999999999999999999999888777777777788999999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|..|....++.|.|.
T Consensus 90 n~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 90 NAAGEAYAAAAVTVL 104 (107)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEEE
Confidence 999999888888886
No 391
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.60 E-value=5.1e-15 Score=122.05 Aligned_cols=92 Identities=28% Similarity=0.495 Sum_probs=81.0
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCee-EEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKR-EIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~-~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
+|.|...+....+.+|++++|.|.+.|.|.|.|.|+|++..+..+.... ...+++..+|.|.++.. +|+|.|+|.|.|
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~a~N 83 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAER-GDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCG-GGCEEEEEEEEE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCc-CCCEEEEEEEEE
Confidence 5888888889999999999999999999999999999999987665433 33455667899999999 999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
..|....++.|.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 84 EYGARQCEARLEVR 97 (99)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCceeEEEEEEEE
Confidence 99999998888886
No 392
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.60 E-value=3.4e-15 Score=126.70 Aligned_cols=97 Identities=31% Similarity=0.487 Sum_probs=82.9
Q ss_pred CCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCC-CCeeEEeeC-CeEEEEEccCCCCCCceeEE
Q psy2775 554 SPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSS-PKKREIFDG-ENIILELKEADSETDAGDYK 631 (785)
Q Consensus 554 ~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~-~~~~~~~~~-~~~~L~i~~~~~~~d~G~Y~ 631 (785)
....+|.|+..+.+..+.+|++++|.|.+.|.|.|.|.|+|++..+... .++.+...+ +..+|.|.++.. +|+|.|+
T Consensus 11 ~~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~ 89 (116)
T 2kkq_A 11 EHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNK-KDAGWYT 89 (116)
T ss_dssp CCCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECG-GGCEEEE
T ss_pred CCCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCc-ccCEEEE
Confidence 3456799999999999999999999999999999999999999998753 445444443 355899999999 9999999
Q ss_pred EEEEcCCcceEEEEEEEEEe
Q psy2775 632 VVATNELGSATHGARVTVDV 651 (785)
Q Consensus 632 C~a~n~~g~~~~~~~l~V~~ 651 (785)
|.|.|..|....++.|.|..
T Consensus 90 C~a~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 90 VSAVNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEcCCCeEEEEEEEEEeC
Confidence 99999999988888887763
No 393
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.60 E-value=6.1e-15 Score=142.94 Aligned_cols=171 Identities=16% Similarity=0.195 Sum_probs=113.7
Q ss_pred eeecCCceEecCCCeEEEEEEEEec--CCCeeEEEECC--EE---cc-------------CCCCEEEeecCCccceEEEE
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNG--EP---LQ-------------ETDEVVFSDQSDMHSYVSIV 74 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~--~~---~~-------------~~~~~~~~~~~~~~~~~~~L 74 (785)
+...|..+.+.+|++++|.|.+.+. +.+.+.||+.. .. +. ...|+.+..+.. ....+|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~~L 81 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPS--ASTSIL 81 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCT--TTEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCC--CCEEEE
Confidence 5667889999999999999999764 55789999853 11 10 123344333221 123569
Q ss_pred EEcccCCCCCeEEEEEEEcC--Ce--eEEEEeeEEEeCC-------CCCCCceecCCCceEeccCCcEEEEEEEecc-CC
Q psy2775 75 TIKSIKKREEGVYTVVAKNR--EG--EAKMDIPVKVNTG-------KPEKPSILEPLHDVSITEGESAVLSVQVGGE-PS 142 (785)
Q Consensus 75 ~i~~~~~~D~G~Y~C~a~~~--~~--~~~~~~~v~v~~~-------~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~ 142 (785)
+|.+++.+|+|.|.|.+.+. .. .......|.|... .+..|.+.. +....+..|+.++|.|.+.|. |.
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~-p~~~~v~~g~~~~L~C~~~g~~P~ 160 (230)
T 1ypz_F 82 TIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFL-PSVAETNLHKTGTYLCLLEAFFPD 160 (230)
T ss_dssp EECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEEC-CCHHHHHHHSCEEEEEEEEEESSC
T ss_pred EECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEEC-CCchhhccCCcceEEEEEeeecCC
Confidence 99999999999999999974 11 1122345666521 122333333 334456679999999999886 65
Q ss_pred -CeEEEeE-CCEEcccce---EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 143 -PKVEWYK-DGKLIKDRQ---ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 143 -~~v~W~~-~g~~~~~~~---~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
+.|+|++ ||..+.... ....++ .+.|.|..... + |.|+|.|.|..+
T Consensus 161 ~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~ 215 (230)
T 1ypz_F 161 VIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENN 215 (230)
T ss_dssp CCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSC
T ss_pred CeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCC
Confidence 5999999 887664321 112222 24688888775 4 999999999865
No 394
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.60 E-value=3.6e-14 Score=128.86 Aligned_cols=161 Identities=13% Similarity=0.097 Sum_probs=110.9
Q ss_pred eeecCCceEecCCCeEEEEEEEEecCCCe-eEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEEc
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVPEPD-LLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAKN 93 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p~~~-i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~~ 93 (785)
+...|....|.+|+++.|+|.+.. +.+. +.|.-. + .+...... + .....|.|.+++. | |.|.|.+.+
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~---l---~~~~~~~~-~--~~~~~l~l~~vs~-~-g~y~C~~~c 69 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETP---L---PKKELLLP-G--NNRKVYELSNVQE-D-SQPMCYSNC 69 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEECS-SSCSEEEEECS---S---CEEEECSS-S--SSEEEEEEEEECS-C-BCCEEEEEC
T ss_pred eEEECCCcEEeCCCCEEEEEEccC-CCCccceEEee---C---CCccEecc-C--CceeEEEEEecCc-C-CEEEEEEEC
Confidence 345677889999999999999864 4454 677521 1 01111011 1 1124589999983 4 999999987
Q ss_pred CCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC--eEEEeECCEEcccceEEEeCCEEEEEE
Q psy2775 94 REGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP--KVEWYKDGKLIKDRQITSEKNTHTLTL 170 (785)
Q Consensus 94 ~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~--~v~W~~~g~~~~~~~~~~~~~~~~L~i 170 (785)
........+.|.|+. .|..+...+....+.+|+.++|.|.+.|. |.. .|+|||+++.+............+|++
T Consensus 70 ~~~~~~~~~~l~V~~---~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~~~~~~~~tl~~ 146 (185)
T 1iam_A 70 PDGQSTAKTFLTVYW---TPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEVTTTV 146 (185)
T ss_dssp SSCEEEEECEEEEEB---CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEEEEEE
T ss_pred CCCceEEEEEEEEeC---CCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccCCCccccEEEEE
Confidence 766777888888874 23334444444568899999999999874 443 589999999986543222233457887
Q ss_pred cccCCCCcEEEEEEEEcCCe
Q psy2775 171 IQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 171 ~~~~~~d~G~Y~C~a~n~~g 190 (785)
...+.+|...|+|+|.|..+
T Consensus 147 ~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 147 LVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp ECCSSCSSCEEEEEEEEECG
T ss_pred eceeccCCCeEEEEEEecCc
Confidence 77677777799999998765
No 395
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.60 E-value=1.9e-15 Score=149.14 Aligned_cols=171 Identities=15% Similarity=0.169 Sum_probs=106.0
Q ss_pred eeeeeeeeecCeEEEEEEEecCCCCceEEEeCC--EE---ec--CC----------C-CeeEEeeCCeEEEEEccCCCCC
Q psy2775 564 RFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--KP---LL--SS----------P-KKREIFDGENIILELKEADSET 625 (785)
Q Consensus 564 ~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~~---i~--~~----------~-~~~~~~~~~~~~L~i~~~~~~~ 625 (785)
.+..+.+.+|++++|.|.+.+.+.+.+.|||.. .. +. .+ . ++.....+... |.|.+++. +
T Consensus 7 ~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~-~ 84 (253)
T 3to4_D 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANM-S 84 (253)
T ss_dssp ECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESC-S
T ss_pred CCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCCh-h
Confidence 345778999999999999999999999999821 10 00 00 1 23222233333 99999999 9
Q ss_pred CceeEEEEEEcCCc------ceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCC
Q psy2775 626 DAGDYKVVATNELG------SATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPP 699 (785)
Q Consensus 626 d~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~ 699 (785)
|+|.|.|.+.+..+ .....+.|.|... +....+|.+...
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~-----------------------------------~~~~~~P~v~~~ 129 (253)
T 3to4_D 85 QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLED-----------------------------------LKNVFPPEVAVF 129 (253)
T ss_dssp SCEEEEEEEECSCCSTTCCEEECCCEEEEEESC-----------------------------------STTCBCCEEEEE
T ss_pred hCeEEEEEEecCCCCcccceEECCCEEEEEecC-----------------------------------CCCCCCCeEEEe
Confidence 99999999998754 1112235555410 011134444322
Q ss_pred CCCcEEeecCCeEEEEEEEec-CCCC-ceEEeECCEEeeeccccccc----------hhh--hcccccceeeeee-ceEE
Q psy2775 700 PPPEVLVKKGEDLKIEVRFKA-LPPP-KAEWTVNGTVIVPSKRVKGK----------AEF--IKKLDDLEVKERE-NAVL 764 (785)
Q Consensus 700 ~~~~~~~~~g~~~~l~C~~~g-~P~p-~i~W~~~~~~~~~~~~~~~~----------~~~--~~~l~~~~v~~~~-~~~~ 764 (785)
.+....+..|+.++|.|.+.| .|+| .|+|++||..+..+...... ..+ ...|.+......| .+.|
T Consensus 130 ~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~y 209 (253)
T 3to4_D 130 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 209 (253)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEE
T ss_pred CCChhhcccCCceEEEEEEceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEE
Confidence 222222445789999999999 6777 89999999999765433211 011 1223332222233 6799
Q ss_pred EEEEecc
Q psy2775 765 EVEVTSD 771 (785)
Q Consensus 765 ~c~~~~~ 771 (785)
+|.|.++
T Consensus 210 tC~v~h~ 216 (253)
T 3to4_D 210 RCQVQFY 216 (253)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999864
No 396
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.60 E-value=2.1e-15 Score=118.53 Aligned_cols=80 Identities=21% Similarity=0.393 Sum_probs=71.1
Q ss_pred eeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEEE
Q psy2775 565 FEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATHG 644 (785)
Q Consensus 565 ~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~ 644 (785)
+.++.+.+|++++|.|.+.| |.|.|+|+|||.+|..+.++.+..++...+|+|.++.. +|+|.|+|.|.|. ..+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~n~----~~~ 76 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARS-GDAGEYLCDAPQD----SRI 76 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSS-TTCEEEEEECTTT----CEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCC-cccEEEEEEECCE----EEE
Confidence 45788999999999999976 99999999999999999998888888889999999999 9999999999664 456
Q ss_pred EEEEEE
Q psy2775 645 ARVTVD 650 (785)
Q Consensus 645 ~~l~V~ 650 (785)
+.|.|+
T Consensus 77 a~l~V~ 82 (84)
T 2lu7_A 77 FLVSVE 82 (84)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 777775
No 397
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.59 E-value=5.7e-15 Score=122.08 Aligned_cols=94 Identities=16% Similarity=0.292 Sum_probs=82.5
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecC--CCCeeEEeeCCeEEEEEccCCCCCCceeEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLS--SPKKREIFDGENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~--~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
+.+|.|...+....+.+|+.++|.|.+.|.|.|.+.|+|++..+.. ..++.+...+...+|.|.++.. +|+|.|+|.
T Consensus 3 ~~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~ 81 (100)
T 3irg_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQK-QDGGLYTLS 81 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCG-GGCEEEEEE
T ss_pred CCCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCc-ccCEEEEEE
Confidence 3468888888889999999999999999999999999999999863 3456666666778999999999 999999999
Q ss_pred EEcCCcceEEEEEEEEE
Q psy2775 634 ATNELGSATHGARVTVD 650 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~ 650 (785)
|.|..|....++.|.|+
T Consensus 82 a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 82 LGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEEEE
Confidence 99999998888888875
No 398
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.59 E-value=1.8e-15 Score=125.99 Aligned_cols=94 Identities=21% Similarity=0.384 Sum_probs=85.6
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
..+|.|...+.+..+.+|++++|.|.+.|.|.|.|.|+|+|..+..+.++.+...+...+|.|.++.. +|+|.|+|.|.
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~ 90 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQA-SDEGNYSVVVE 90 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCS-SCCSEEEECCB
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCc-hhCEEEEEEEE
Confidence 34688999999999999999999999999999999999999999888787777777788999999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|..|....++.|.|+
T Consensus 91 N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CSSCBCCEEEEEEEC
T ss_pred eCCCeEEEEEEEEEE
Confidence 999998888888874
No 399
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.59 E-value=4.6e-15 Score=122.57 Aligned_cols=92 Identities=29% Similarity=0.418 Sum_probs=80.7
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEE-eeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREI-FDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~-~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
+|.|...+....+.+|++++|.|.+.|+|.|.|.|+|+|..+....+.... ..++..+|.|.++.. +|+|.|+|.|.|
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n 83 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRA-SDAGAYACVAKN 83 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCG-GGCEEEEEEEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCc-ccCEEEEEEEEc
Confidence 578888888899999999999999999999999999999999877654443 345557899999999 999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
..|....++.|.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 84 RAGEATFTVQLDVL 97 (100)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEE
Confidence 99999888888886
No 400
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.59 E-value=1.4e-14 Score=118.76 Aligned_cols=90 Identities=19% Similarity=0.355 Sum_probs=80.8
Q ss_pred eEeeeeeeeeeeecCeEEEEEEEecC-CCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCC
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAKVKAS-PAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~ 638 (785)
.+...+.+..+.+|+.++|.|.+.|. |.|.+.|+|++..+..+.++.+...++..+|.|.++.. +|+|.|+|.|.|..
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a~n~~ 81 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITK-LDDGTYRCKVVNDY 81 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCG-GGCEEEEEEEECSS
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCCh-hhCeEEEEEEECCC
Confidence 34455678899999999999999998 99999999999999888888777778888999999999 99999999999999
Q ss_pred cceEEEEEEEEE
Q psy2775 639 GSATHGARVTVD 650 (785)
Q Consensus 639 g~~~~~~~l~V~ 650 (785)
|....++.|.|.
T Consensus 82 g~~~~~~~l~V~ 93 (97)
T 2bk8_A 82 GEDSSYAELFVK 93 (97)
T ss_dssp CEEEEEEEEEET
T ss_pred CeEeEEEEEEEE
Confidence 999998888885
No 401
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.58 E-value=6.9e-15 Score=145.30 Aligned_cols=177 Identities=12% Similarity=0.202 Sum_probs=111.3
Q ss_pred cCCceEecCCCeEEEEEEEEecC--CCeeEEEECCE-----Ec---c----------CCCCEEEeecCCccceEEEEEEc
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNGE-----PL---Q----------ETDEVVFSDQSDMHSYVSIVTIK 77 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~~-----~~---~----------~~~~~~~~~~~~~~~~~~~L~i~ 77 (785)
.+..+.+.+|++|+|.|.+.+.. ...+.||+... .+ . ...|+.+..+.. .....|+|.
T Consensus 6 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I~ 83 (263)
T 3iu4_H 6 ESGPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNS--KSQVFLKMN 83 (263)
T ss_dssp EECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGG--GTEEEEEEC
T ss_pred CCCCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCC--CCEEEEEEC
Confidence 34468899999999999997643 46799998421 11 0 123444433322 123569999
Q ss_pred ccCCCCCeEEEEEEEcCC-----e-eE--EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-C-CCeEEE
Q psy2775 78 SIKKREEGVYTVVAKNRE-----G-EA--KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-P-SPKVEW 147 (785)
Q Consensus 78 ~~~~~D~G~Y~C~a~~~~-----~-~~--~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p-~~~v~W 147 (785)
+++.+|+|.|.|.+.+.. + .. .....|.|....+.+|.+........+..|+.+.|.|.+.+. | .+.|+|
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W 163 (263)
T 3iu4_H 84 SLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW 163 (263)
T ss_dssp SCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE
T ss_pred CCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE
Confidence 999999999999998763 1 11 123467776555566777633333345689999999999875 4 268999
Q ss_pred eECCEEcccce-----EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEE
Q psy2775 148 YKDGKLIKDRQ-----ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLN 199 (785)
Q Consensus 148 ~~~g~~~~~~~-----~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 199 (785)
++..+.... ....++ .+.|.|.....+| |.|+|.|.|..+.......+.
T Consensus 164 --~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 164 --NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp --GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEECC
T ss_pred --CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEEc
Confidence 444332211 111111 2468888887788 999999999877544444333
No 402
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=2.6e-14 Score=121.20 Aligned_cols=95 Identities=16% Similarity=0.250 Sum_probs=85.0
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|...+..+.+.+|++++|.|.+.|.|.+.+.|++++..+....++.+..... .++|+|.+++.+|+|.|+|
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C 80 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSEN----GSKLTILAARQEHCGCYTL 80 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSS----EEEEEETTCCTTTCEEEEE
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCC----EEEEEECCCChhcCEEEEE
Confidence 479999999999999999999999999999999999999999988777777765432 3569999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEeC
Q psy2775 90 VAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~~ 108 (785)
.|.|..|.....+.|.|..
T Consensus 81 ~a~N~~g~~~~~~~l~V~~ 99 (114)
T 2cqv_A 81 LVENKLGSRQAQVNLTVVD 99 (114)
T ss_dssp EEECSSCEEECCEEEEEEC
T ss_pred EEEECCCcEEEEEEEEEEC
Confidence 9999999988888888874
No 403
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=7.1e-15 Score=121.09 Aligned_cols=90 Identities=29% Similarity=0.470 Sum_probs=78.7
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+|.|...+.+..+.+|+.++|.|.+.|.|.|.+.|+|++..+..... .......+|.|.++.. +|+|.|+|.|.|
T Consensus 10 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~---~~~~~~~~L~i~~v~~-~D~G~Y~C~a~N 85 (99)
T 2yr3_A 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS---TCEAGVAELHIQDALP-EDHGTYTCLAEN 85 (99)
T ss_dssp EEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC---EEETTEEEEEECSCCT-TCCBCEEEEEEC
T ss_pred cCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce---EeeCCeEEEEECCCCh-hhCEEEEEEEEE
Confidence 358898888899999999999999999999999999999998865432 2445677899999999 999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
..|....++.|.|+
T Consensus 86 ~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 86 ALGQVSCSAWVTVH 99 (99)
T ss_dssp SSCEEEEECCEEEC
T ss_pred CCCeEEEEEEEEEC
Confidence 99999888888773
No 404
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=9.8e-15 Score=122.93 Aligned_cols=95 Identities=22% Similarity=0.411 Sum_probs=81.8
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCC-CCeeEEee-CCeEEEEEccCCCCCCceeEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSS-PKKREIFD-GENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~-~~~~~~~~-~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
..+|.|...+....+.+|+.++|.|.+.|+|.|.|.|+|++..+... .++.+... ++..+|.|.++.. +|+|.|+|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~ 84 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTL-DDDGNYTIM 84 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCT-TTCSCCEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCCh-hhCEEEEEE
Confidence 35688888888999999999999999999999999999999998763 44444443 4556899999999 999999999
Q ss_pred EEcCCcceEEEEEEEEEe
Q psy2775 634 ATNELGSATHGARVTVDV 651 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~~ 651 (785)
|.|..|....++.|.|..
T Consensus 85 a~N~~g~~~~~~~l~V~~ 102 (110)
T 2dm2_A 85 AANPQGRISCTGRLMVQA 102 (110)
T ss_dssp EECTTCCEEECCCEEEEC
T ss_pred EEECCCeEEEEEEEEEEC
Confidence 999999998888888873
No 405
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.57 E-value=2.7e-14 Score=118.62 Aligned_cols=97 Identities=20% Similarity=0.366 Sum_probs=86.0
Q ss_pred cccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 7 ILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 7 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
+....||.|...+..+.+.+|+++.|.|.+.|.|.+.+.|++++..+....++.+...+.. .+|.|.+++.+|+|.
T Consensus 3 l~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~----~~L~i~~~~~~D~G~ 78 (103)
T 3qp3_A 3 FTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGV----LTLEILDCHTDDSGT 78 (103)
T ss_dssp TTTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTE----EEEEECSCCGGGCEE
T ss_pred CCCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCE----EEEEEcCCCcccCEE
Confidence 3455789999999999999999999999999999999999999999988888776654432 569999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEe
Q psy2775 87 YTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
|+|.|.|..|.....+.|.|.
T Consensus 79 Y~C~a~N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 79 YRAVCTNYKGEASDYATLDVT 99 (103)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEeCCCcEEEEEEEEEE
Confidence 999999999999888888886
No 406
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.57 E-value=5.6e-15 Score=118.16 Aligned_cols=86 Identities=17% Similarity=0.251 Sum_probs=72.0
Q ss_pred CCeEeeeeeeee--eeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 558 APLFIERFEEKT--VKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 558 ~p~~~~~~~~~~--v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
||.|+.++++.. +.+|++++|.|.+.| |.|.|+|+|||.+|..+.++.+..++...+|.|.++.. +|+|.|+|.|.
T Consensus 4 P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~-~D~G~Y~C~a~ 81 (91)
T 2lvc_A 4 PVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQP-SDGGEFQCVAG 81 (91)
T ss_dssp CCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCG-GGCSEEEEECS
T ss_pred CcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCCh-hhcEEEEEEEc
Confidence 456666666554 468999999999976 88999999999999999999888899999999999999 99999999997
Q ss_pred cCCcceEEEEEEEE
Q psy2775 636 NELGSATHGARVTV 649 (785)
Q Consensus 636 n~~g~~~~~~~l~V 649 (785)
|. ..+++|.|
T Consensus 82 n~----~~~~~ltV 91 (91)
T 2lvc_A 82 DE----CAYFTVTI 91 (91)
T ss_dssp SC----EEEEEEEC
T ss_pred ce----EEEEEEEC
Confidence 75 44555543
No 407
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.56 E-value=1.7e-14 Score=139.84 Aligned_cols=177 Identities=16% Similarity=0.228 Sum_probs=113.0
Q ss_pred ccCCCeEEecCCcEEEEEEEeC---CCceEEEEECC--EE---cc-------------cCCCEEEEEeC--cEEEEEEcc
Q psy2775 420 VPLQDVKVSRDEKASFEIELTK---GDALVKWYKDG--KE---IA-------------FSENVTLSIDG--KKQKLIIFS 476 (785)
Q Consensus 420 ~~~~~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~~---~~-------------~~~~~~~~~~~--~~~~L~i~~ 476 (785)
..+..+.+.+|++++|.|.+.+ +.+.+.|++.. .. +. ...++.+..+. ....|+|.+
T Consensus 6 q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (230)
T 1ypz_F 6 QPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYS 85 (230)
T ss_dssp CSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECS
T ss_pred ccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECc
Confidence 3456778899999999999987 35679999842 11 10 12445555432 467899999
Q ss_pred CCCCCcEEEEEEEeecC-----cceeEEEEEEEcCcccccc-cCCCeeEEeccCceeEEEEecCCceeeEEeeccccccc
Q psy2775 477 AGLEDAGEYSCRVGDTG-----DKESKATLTVEAPAVEFLT-KLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTC 550 (785)
Q Consensus 477 ~~~~d~G~Y~C~a~n~g-----~~~~~~~l~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 550 (785)
++.+|+|.|.|.+.+.+ .......|.|......+.. ..|.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~---------------------------------- 131 (230)
T 1ypz_F 86 LEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPK---------------------------------- 131 (230)
T ss_dssp CCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCC----------------------------------
T ss_pred CChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCC----------------------------------
Confidence 99999999999999841 1123457777621100000 0010
Q ss_pred CCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CC-CceEEEe-CCEEecCCCCeeEEeeCC----eEEEEEccCCC
Q psy2775 551 PLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PA-PSIVWFR-NNKPLLSSPKKREIFDGE----NIILELKEADS 623 (785)
Q Consensus 551 ~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~-p~v~W~~-~~~~i~~~~~~~~~~~~~----~~~L~i~~~~~ 623 (785)
|.+.. +....+.+|+.++|.|.+.|. |. +.|.|++ +|..+.......+...++ .+.|+|.....
T Consensus 132 --------~~v~~-p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~ 202 (230)
T 1ypz_F 132 --------PTIFL-PSVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM 202 (230)
T ss_dssp --------CCEEC-CCHHHHHHHSCEEEEEEEEEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT
T ss_pred --------ceEEC-CCchhhccCCcceEEEEEeeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC
Confidence 22221 223356679999999999986 86 5999999 887765322111112232 24688877643
Q ss_pred CCCceeEEEEEEcCCcceE
Q psy2775 624 ETDAGDYKVVATNELGSAT 642 (785)
Q Consensus 624 ~~d~G~Y~C~a~n~~g~~~ 642 (785)
| |.|+|.|.|..+...
T Consensus 203 --~-~~ytC~v~~~~~~~~ 218 (230)
T 1ypz_F 203 --G-KEHRCIVKHENNKGG 218 (230)
T ss_dssp --T-SCEEEEEECSSCTTT
T ss_pred --C-CEEEEEEEECCCCCc
Confidence 4 999999999887543
No 408
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.56 E-value=6.9e-15 Score=164.68 Aligned_cols=164 Identities=14% Similarity=0.235 Sum_probs=115.6
Q ss_pred CeEEecCCcEEEEEEE-eC-CCceEEEEECCEEcc------------cCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEE
Q psy2775 424 DVKVSRDEKASFEIEL-TK-GDALVKWYKDGKEIA------------FSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRV 489 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~-~~-~~~~i~W~~~~~~~~------------~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 489 (785)
...+.+|++++|.|.+ .+ +.+.++|++++..+. ...+..+..++ +|.|.+++.+|+|.|+|.|
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~~ 451 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQA 451 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEEE
T ss_pred ccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEEE
Confidence 4667899999999998 44 677899999865321 12233333333 6999999999999999999
Q ss_pred eec-Ccc-eeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCCCCCCCCCeEeeeeee
Q psy2775 490 GDT-GDK-ESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEE 567 (785)
Q Consensus 490 ~n~-g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~ 567 (785)
.|. |.. ...+.|.|..++.. |.+... .
T Consensus 452 ~n~~~~~~~~~~~l~V~~~~~~-------------------------------------------------p~i~~~--~ 480 (581)
T 3o3u_N 452 MNRNGKETKSNYRVRVYQIPGK-------------------------------------------------PEIVDS--A 480 (581)
T ss_dssp ECTTSCEEEEEEEEEEEBCCCC-------------------------------------------------CEEESC--C
T ss_pred EcCCCceeEEEEEEEEEcCCCC-------------------------------------------------CEEEcC--C
Confidence 997 655 66788888775421 222211 1
Q ss_pred eeeeecCe-EEEEEEEec-CCCCceEEEeCCEEecCCCCeeEEe-------eCC----eEEEEEccCCCCCCceeEEEEE
Q psy2775 568 KTVKEKGT-IRLMAKVKA-SPAPSIVWFRNNKPLLSSPKKREIF-------DGE----NIILELKEADSETDAGDYKVVA 634 (785)
Q Consensus 568 ~~v~~g~~-v~l~C~~~g-~P~p~v~W~~~~~~i~~~~~~~~~~-------~~~----~~~L~i~~~~~~~d~G~Y~C~a 634 (785)
..+.+|+. +.|.|.+.| +|.|.|+|++||..+........+. +.+ .++|+|..+..+++.|.|+|.|
T Consensus 481 ~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~ 560 (581)
T 3o3u_N 481 SELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSF 560 (581)
T ss_dssp SEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEE
T ss_pred cccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEE
Confidence 12445554 467999998 6999999999999987644332221 111 3579999998536689999999
Q ss_pred EcCCcce
Q psy2775 635 TNELGSA 641 (785)
Q Consensus 635 ~n~~g~~ 641 (785)
.|..+..
T Consensus 561 ~n~~~~~ 567 (581)
T 3o3u_N 561 SPGLPRH 567 (581)
T ss_dssp ECSSCSS
T ss_pred eccCCCC
Confidence 9997543
No 409
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.8e-14 Score=121.82 Aligned_cols=92 Identities=18% Similarity=0.302 Sum_probs=79.1
Q ss_pred CCCeEeee---eeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEE
Q psy2775 557 QAPLFIER---FEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 557 ~~p~~~~~---~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
.+|.|... .....+.+|+.++|.|.+.|+|.|.|.|+|+|..+. ..+..+...+...+|.|.++.. +|+|.|+|.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~-~D~G~Y~C~ 97 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAAR-SDSGEYELS 97 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCT-TTCEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCCh-hcCEEEEEE
Confidence 35777542 467889999999999999999999999999999996 4556666667778899999999 999999999
Q ss_pred EEcCCcceEEEEEEEEE
Q psy2775 634 ATNELGSATHGARVTVD 650 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~ 650 (785)
|.|..|....++.|.|.
T Consensus 98 a~N~~G~~~~~~~l~V~ 114 (118)
T 2e7c_A 98 VQIENMKDTATIRIRVV 114 (118)
T ss_dssp EECSSCEECCEEEEEEE
T ss_pred EEeCCCeEEEEEEEEEE
Confidence 99999988887877775
No 410
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.56 E-value=1.1e-14 Score=163.12 Aligned_cols=162 Identities=19% Similarity=0.310 Sum_probs=117.0
Q ss_pred CCceEecCCCeEEEEEEE-EecCCCeeEEEECCEEccC------------CCCEEEeecCCccceEEEEEEcccCCCCCe
Q psy2775 19 TKPVYAEENSEVTLEVRL-VAVPEPDLLWYYNGEPLQE------------TDEVVFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 19 ~~~~~v~~G~~v~l~C~~-~g~p~~~i~W~~~~~~~~~------------~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
...+.+.+|++++|.|.+ .+.|.+.|.|++++..+.. ..+..+... .+|.|.+++.+|+|
T Consensus 373 ~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~-------~~L~i~~v~~~D~G 445 (581)
T 3o3u_N 373 AQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPN-------GSLFLPAVGIQDEG 445 (581)
T ss_dssp CEEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTT-------SCEEESSCCGGGCE
T ss_pred hcccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCC-------ceEEEeccccccCe
Confidence 346889999999999998 7888899999998753211 112222211 24999999999999
Q ss_pred EEEEEEEcCCeeE-EEEeeEEEeCCCCCCCceecCCCceEeccCCc-EEEEEEEec-cCCCeEEEeECCEEcccc--eE-
Q psy2775 86 VYTVVAKNREGEA-KMDIPVKVNTGKPEKPSILEPLHDVSITEGES-AVLSVQVGG-EPSPKVEWYKDGKLIKDR--QI- 159 (785)
Q Consensus 86 ~Y~C~a~~~~~~~-~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~-v~l~C~~~g-~p~~~v~W~~~g~~~~~~--~~- 159 (785)
.|+|.+.|..+.. ...+.|.|.. .+..|.+..... .+..|+. +.|.|.+.+ +|.+.|+|++||..+... ..
T Consensus 446 ~Y~C~~~n~~~~~~~~~~~l~V~~-~~~~p~i~~~~~--~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~ 522 (581)
T 3o3u_N 446 IFRCQAMNRNGKETKSNYRVRVYQ-IPGKPEIVDSAS--ELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVS 522 (581)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEB-CCCCCEEESCCS--EECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEE
T ss_pred EEEEEEEcCCCceeEEEEEEEEEc-CCCCCEEEcCCc--ccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEE
Confidence 9999999998876 6677888864 334555544432 2445555 567999987 699999999999988642 11
Q ss_pred -----EE--eCC----EEEEEEcccC-CCCcEEEEEEEEcCCe
Q psy2775 160 -----TS--EKN----THTLTLIQCS-TKDKGRYSVKVTNKEG 190 (785)
Q Consensus 160 -----~~--~~~----~~~L~i~~~~-~~d~G~Y~C~a~n~~g 190 (785)
.. ..+ .++|.|.+++ .++.|.|+|.|.|..+
T Consensus 523 ~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 523 VKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred EEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 11 111 3579999988 5668999999999864
No 411
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=3.4e-14 Score=117.07 Aligned_cols=95 Identities=22% Similarity=0.369 Sum_probs=82.3
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|...+..+.+.+|++++|.|.+.|.|.+.+.|++++..+....+..+....+. ..+|.|.+++.+|+|.|+|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~C 79 (99)
T 1g1c_A 3 MEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDN---VCELVIRDVTGEDSASIMV 79 (99)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETT---EEEEEECSCCGGGCEEEEE
T ss_pred CCCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCC---EEEEEECCCCcCCCEEEEE
Confidence 3589999999999999999999999999999999999999999987777655432221 2569999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEe
Q psy2775 90 VAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~ 107 (785)
.|.|..|.....+.|.|.
T Consensus 80 ~a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 80 KAINIAGETSSHAFLLVQ 97 (99)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEECCCcEEEEEEEEEe
Confidence 999999999888888875
No 412
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.56 E-value=9.2e-15 Score=144.03 Aligned_cols=176 Identities=13% Similarity=0.144 Sum_probs=110.0
Q ss_pred eEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCC--E--E-ec------------CCCCeeEEe-eCCeEEEEEccC
Q psy2775 560 LFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--K--P-LL------------SSPKKREIF-DGENIILELKEA 621 (785)
Q Consensus 560 ~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~--~-i~------------~~~~~~~~~-~~~~~~L~i~~~ 621 (785)
.+...+....+.+|++++|.|.+. .+.+.+.|||+. . . +. ...++.... .....+|.|.++
T Consensus 5 ~v~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v 83 (252)
T 1oga_E 5 GITQSPKYLFRKEGQNVTLSCEQN-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSA 83 (252)
T ss_dssp CEECSCSEEEEETTCCEEECCEEC-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSC
T ss_pred cceEcCCeEEEcCCCcEEEEEEeC-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcC
Confidence 344555678899999999999995 467899999953 1 1 10 112333322 134568999999
Q ss_pred CCCCCceeEEEEEEcCC---cceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCC
Q psy2775 622 DSETDAGDYKVVATNEL---GSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDP 698 (785)
Q Consensus 622 ~~~~d~G~Y~C~a~n~~---g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~ 698 (785)
+. +|+|.|.|.+.|.. ........|.|... +....+|.+..
T Consensus 84 ~~-~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~~~~P~v~~ 127 (252)
T 1oga_E 84 QK-NPTAFYLCASSSRSSYEQYFGPGTRLTVTED-----------------------------------LKNVFPPEVAV 127 (252)
T ss_dssp CS-CCCEEEEEEEESSTTSCCEECCCEEEEEESC-----------------------------------GGGCBCCEEEE
T ss_pred Ch-hhCEEEEEEEecCCccceeECCCEEEEEecc-----------------------------------cCCCCCCeEEE
Confidence 99 99999999999962 11112244665410 01124555543
Q ss_pred CCCCcEEeecCCeEEEEEEEecC-CCC-ceEEeECCEEeeeccccccc--------h--hh--hcccccceeeee-eceE
Q psy2775 699 PPPPEVLVKKGEDLKIEVRFKAL-PPP-KAEWTVNGTVIVPSKRVKGK--------A--EF--IKKLDDLEVKER-ENAV 763 (785)
Q Consensus 699 ~~~~~~~~~~g~~~~l~C~~~g~-P~p-~i~W~~~~~~~~~~~~~~~~--------~--~~--~~~l~~~~v~~~-~~~~ 763 (785)
..+....+..|+.++|.|.+.|+ |.| .|+|++||..+..+...... . .| .+.|.+...... +.+.
T Consensus 128 ~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ 207 (252)
T 1oga_E 128 FEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNH 207 (252)
T ss_dssp ECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCE
T ss_pred ECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCE
Confidence 22333335579999999999995 754 99999999998766432200 1 11 112333222222 4678
Q ss_pred EEEEEeccc
Q psy2775 764 LEVEVTSDK 772 (785)
Q Consensus 764 ~~c~~~~~~ 772 (785)
|+|.|.++.
T Consensus 208 ytC~v~~~~ 216 (252)
T 1oga_E 208 FRCQVQFYG 216 (252)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEcCC
Confidence 999999743
No 413
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.56 E-value=5.1e-15 Score=124.62 Aligned_cols=92 Identities=27% Similarity=0.354 Sum_probs=74.6
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecC---CCCceEEEeCCEE-ec--CCCCeeEE--eeC----CeEEEEEccCCCCCC
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKAS---PAPSIVWFRNNKP-LL--SSPKKREI--FDG----ENIILELKEADSETD 626 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~---P~p~v~W~~~~~~-i~--~~~~~~~~--~~~----~~~~L~i~~~~~~~d 626 (785)
|.|+..++++.+.+|++++|.|.+.|. |.|.|.|||+... +. .+.+..+. +.. ..+.|+|.++.. +|
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D 86 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKD-NF 86 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCT-TS
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCc-cc
Confidence 778889999999999999999999875 8999999997421 11 12333322 111 257899999999 99
Q ss_pred ceeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 627 AGDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 627 ~G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
+|.|+|+|+|..|..+.+++|.|++
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEEC
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999999999999999999986
No 414
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=9.3e-15 Score=123.14 Aligned_cols=95 Identities=26% Similarity=0.431 Sum_probs=82.9
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEe-eCCeEEEEEccCCCCCCceeEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIF-DGENIILELKEADSETDAGDYKVVA 634 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~-~~~~~~L~i~~~~~~~d~G~Y~C~a 634 (785)
+.+|.|...+....+.+|+.++|.|.+.|.|.|.|.|+|++..+....+..... .++..+|.|.++.. +|+|.|+|.|
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C~a 85 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTS-RDAGIYTCIA 85 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCG-GGCSBBCEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCc-ccCEEEEEEE
Confidence 457999999999999999999999999999999999999999987766554433 34567899999999 9999999999
Q ss_pred EcCCcceEEEEEEEEEe
Q psy2775 635 TNELGSATHGARVTVDV 651 (785)
Q Consensus 635 ~n~~g~~~~~~~l~V~~ 651 (785)
.|..|....++.|.|..
T Consensus 86 ~n~~g~~~~~~~l~V~~ 102 (110)
T 2dm3_A 86 TNRAGQNSFSLELVVAA 102 (110)
T ss_dssp ECSSCEEEECCEEEEEC
T ss_pred ECCCCEEEEEEEEEEeC
Confidence 99999988888888863
No 415
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.55 E-value=3.7e-14 Score=114.28 Aligned_cols=90 Identities=34% Similarity=0.452 Sum_probs=81.9
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecC
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTG 493 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g 493 (785)
.++.+..++.+..+.+|+.++|.|.+.++.+.+.|+|+|.++..+.++.+..++....|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n-- 81 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSEPDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN-- 81 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESSSSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT--
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECCCCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC--
Confidence 467788888999999999999999998877889999999999988999999888889999999999999999999999
Q ss_pred cceeEEEEEEEcC
Q psy2775 494 DKESKATLTVEAP 506 (785)
Q Consensus 494 ~~~~~~~l~V~~~ 506 (785)
...++.|.|.++
T Consensus 82 -~~~sa~L~V~~~ 93 (93)
T 1waa_A 82 -TKSAANLKVKEL 93 (93)
T ss_dssp -EEEEEEEEEECC
T ss_pred -CcEEEEEEEEcC
Confidence 677889998763
No 416
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.55 E-value=5.3e-14 Score=118.40 Aligned_cols=107 Identities=14% Similarity=0.209 Sum_probs=83.0
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEec---CCCeeEEEECCEE-c--cCCCCEEEeec--CCccceEEEEEEcccCCCCC
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAV---PEPDLLWYYNGEP-L--QETDEVVFSDQ--SDMHSYVSIVTIKSIKKREE 84 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~---p~~~i~W~~~~~~-~--~~~~~~~~~~~--~~~~~~~~~L~i~~~~~~D~ 84 (785)
|.|...|.++.|.+|++++|.|.+.|. |.|.|.|||+... + ....++.+... .....+...|+|.+++.+|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 679999999999999999999999875 7899999997421 1 12345555321 22222457799999999999
Q ss_pred eEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecC
Q psy2775 85 GVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEP 119 (785)
Q Consensus 85 G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~ 119 (785)
|.|+|+|.|..+..+..+.|.|.+.++..|.+...
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~~~~~~p~~~i~ 122 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDSG 122 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEECCCCSCCCCCCS
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEecCCCCCeEEec
Confidence 99999999999999999999998755556665443
No 417
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.55 E-value=4e-14 Score=139.75 Aligned_cols=179 Identities=13% Similarity=0.200 Sum_probs=114.9
Q ss_pred cCCceEecCCCeEEEEEEEEec--CCCeeEEEECC--E---Ec--------------cCCCCEEEeecCCccceEEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNG--E---PL--------------QETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~--~---~~--------------~~~~~~~~~~~~~~~~~~~~L~i 76 (785)
.+..+.+.+|++|+|.|.+.+. ....+.||+.. . .+ ....|+.+..+.. ....+|+|
T Consensus 29 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I 106 (256)
T 3sob_H 29 ESGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTS--KNTAYLQM 106 (256)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGG--GTEEEEEE
T ss_pred ecCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCC--CCEEEEEE
Confidence 3456789999999999999753 24679999842 1 11 0113444433321 22356999
Q ss_pred cccCCCCCeEEEEEEEcCCe-----------eEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEec-cC-CC
Q psy2775 77 KSIKKREEGVYTVVAKNREG-----------EAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EP-SP 143 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~-----------~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g-~p-~~ 143 (785)
.+++.+|+|.|.|.+.+..+ .......|.|......+|.+........+.+|+.+.|.|.+.+ .| ++
T Consensus 107 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~ 186 (256)
T 3sob_H 107 NSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 186 (256)
T ss_dssp CSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCC
T ss_pred CCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCe
Confidence 99999999999999987431 1222345677654556677764333445678999999999987 44 35
Q ss_pred eEEEeECCEEcccce-----EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEee
Q psy2775 144 KVEWYKDGKLIKDRQ-----ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNVD 201 (785)
Q Consensus 144 ~v~W~~~g~~~~~~~-----~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 201 (785)
.+.| +|..+.... ....++ .+.|.|.....+| |.|+|.|.|..+.......+.+.
T Consensus 187 ~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 187 TVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp EEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred EEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 7999 554443211 111111 3478899999999 99999999988766555555543
No 418
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.55 E-value=1.9e-14 Score=116.88 Aligned_cols=90 Identities=22% Similarity=0.339 Sum_probs=76.7
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECC--EEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG--EPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
.||.|...+..+.+.+|+++.|.|.+.|.|.|.+.|++++ ..+....... ... ..++|.|.+++.+|+|.|+
T Consensus 1 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~--~~~----~~~~L~i~~~~~~D~G~Y~ 74 (93)
T 1wit_A 1 LKPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVD--AKS----STTSIFFPSAKRADSGNYK 74 (93)
T ss_dssp CCCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEE--EET----TEEEEECTTBCGGGCEEEE
T ss_pred CCCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEE--ecC----CEEEEEECCCChhcCEEEE
Confidence 4899998999999999999999999999999999999999 7776543222 221 2367999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEE
Q psy2775 89 VVAKNREGEAKMDIPVKV 106 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v 106 (785)
|.|.|..|.....+.|.|
T Consensus 75 C~a~N~~G~~~~~~~l~V 92 (93)
T 1wit_A 75 LKVKNELGEDEAIFEVIV 92 (93)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEcCCCeEEEEEEEEE
Confidence 999999999888888776
No 419
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.55 E-value=6.1e-14 Score=136.77 Aligned_cols=177 Identities=15% Similarity=0.173 Sum_probs=114.1
Q ss_pred CCeEEecCCcEEEEEEEeCC-----CceEEEEECC--E---Ec---c----------------cCCCEEEEEe--CcEEE
Q psy2775 423 QDVKVSRDEKASFEIELTKG-----DALVKWYKDG--K---EI---A----------------FSENVTLSID--GKKQK 471 (785)
Q Consensus 423 ~~~~v~~g~~~~l~C~~~~~-----~~~i~W~~~~--~---~~---~----------------~~~~~~~~~~--~~~~~ 471 (785)
..+.+.+|++++|.|.+.+. ...+.|++.. . .+ . ..+++.+..+ .....
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 87 (239)
T 3tv3_H 8 GPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVF 87 (239)
T ss_dssp SCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEE
T ss_pred CCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEE
Confidence 45678899999999999873 3479999832 1 11 1 1234555543 34678
Q ss_pred EEEccCCCCCcEEEEEEEeec-Cc-------------ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCce
Q psy2775 472 LIIFSAGLEDAGEYSCRVGDT-GD-------------KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDI 537 (785)
Q Consensus 472 L~i~~~~~~d~G~Y~C~a~n~-g~-------------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (785)
|+|.+++.+|+|.|.|.+.+. +. ......|.|...+
T Consensus 88 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~------------------------------ 137 (239)
T 3tv3_H 88 LKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSAS------------------------------ 137 (239)
T ss_dssp EEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCC------------------------------
T ss_pred EEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCC------------------------------
Confidence 999999999999999999874 21 1122345554211
Q ss_pred eeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CCC-ceEEEeCCEEecCCCCeeEEeeCC---
Q psy2775 538 QVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PAP-SIVWFRNNKPLLSSPKKREIFDGE--- 612 (785)
Q Consensus 538 ~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~p-~v~W~~~~~~i~~~~~~~~~~~~~--- 612 (785)
..+|.+........+..|+.++|.|.+.|. |.+ .+.|++++..+...........++
T Consensus 138 ------------------~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~ 199 (239)
T 3tv3_H 138 ------------------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYS 199 (239)
T ss_dssp ------------------CBCCEEEEECCCCCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEE
T ss_pred ------------------CcCCEEEEECCChhhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEE
Confidence 012444433334456679999999999984 655 589999987432111111111122
Q ss_pred -eEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEE
Q psy2775 613 -NIILELKEADSETDAGDYKVVATNELGSATHGARVTV 649 (785)
Q Consensus 613 -~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 649 (785)
.+.|+|..... +| |.|+|.|.|..+.......|.+
T Consensus 200 ~~s~L~i~~~~~-~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 200 LSSVVTVPSSSL-GT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp EEEEEEEEGGGT-TT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEEEEchhhc-CC-CEEEEEEEECCCCceEEEEecc
Confidence 24688998887 78 9999999999887776666654
No 420
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.54 E-value=4.2e-14 Score=137.40 Aligned_cols=176 Identities=13% Similarity=0.114 Sum_probs=110.2
Q ss_pred CeEEecCCcEEEEEEEeCC---CceE--EEEECC--E---Ec-----c-----------cCCCEEEEEeC--cEEEEEEc
Q psy2775 424 DVKVSRDEKASFEIELTKG---DALV--KWYKDG--K---EI-----A-----------FSENVTLSIDG--KKQKLIIF 475 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~~---~~~i--~W~~~~--~---~~-----~-----------~~~~~~~~~~~--~~~~L~i~ 475 (785)
...+.+|++++|.|.+.+. ...+ .|++.. . .+ . ...++.+..+. ....|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 88 (232)
T 3qhz_H 9 PALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMT 88 (232)
T ss_dssp CSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEEC
T ss_pred CEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEEC
Confidence 4568899999999999862 2334 999832 1 11 0 11366665543 56789999
Q ss_pred cCCCCCcEEEEEEEeecC---------cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccc
Q psy2775 476 SAGLEDAGEYSCRVGDTG---------DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFI 546 (785)
Q Consensus 476 ~~~~~d~G~Y~C~a~n~g---------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~ 546 (785)
+++.+|+|.|.|.+.+.+ .......|.|.....
T Consensus 89 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~-------------------------------------- 130 (232)
T 3qhz_H 89 NMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSAST-------------------------------------- 130 (232)
T ss_dssp SCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCC--------------------------------------
T ss_pred cCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCC--------------------------------------
Confidence 999999999999998752 112334566653210
Q ss_pred ccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecCCCC--ceEEEeCCEEecCCCCeeEEeeCC----eEEEEEcc
Q psy2775 547 VPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKASPAP--SIVWFRNNKPLLSSPKKREIFDGE----NIILELKE 620 (785)
Q Consensus 547 ~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p--~v~W~~~~~~i~~~~~~~~~~~~~----~~~L~i~~ 620 (785)
.+|.+........+..|+.++|.|.+.|.+++ .+.|++++..+...........++ .+.|.|..
T Consensus 131 ----------~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~ 200 (232)
T 3qhz_H 131 ----------KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS 200 (232)
T ss_dssp ----------BCCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEG
T ss_pred ----------CCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEch
Confidence 11444422233456679999999999986443 688999986432111111111122 24688998
Q ss_pred CCCCCCceeEEEEEEcCCcceEEEEEEEE
Q psy2775 621 ADSETDAGDYKVVATNELGSATHGARVTV 649 (785)
Q Consensus 621 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 649 (785)
... +| |.|+|.|.|..+.......|.+
T Consensus 201 ~~~-~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 201 SSL-GT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp GGG-GT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred hhc-CC-CEEEEEEEeCCCCccEEEEeCC
Confidence 887 78 9999999999988777666654
No 421
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.54 E-value=3.6e-16 Score=149.83 Aligned_cols=178 Identities=12% Similarity=0.096 Sum_probs=109.0
Q ss_pred EeeeeeeeeeeecCeEEEEEEEecCCC---CceEEEeCCEEecCCCCe-eE-EeeC---CeEEEEEccCCCCCCceeEEE
Q psy2775 561 FIERFEEKTVKEKGTIRLMAKVKASPA---PSIVWFRNNKPLLSSPKK-RE-IFDG---ENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 561 ~~~~~~~~~v~~g~~v~l~C~~~g~P~---p~v~W~~~~~~i~~~~~~-~~-~~~~---~~~~L~i~~~~~~~d~G~Y~C 632 (785)
++..+....+.+|++++|.|.+.|+++ +.|.| + +..+...... .. ...+ ....|.|.++.. +|+|.|+|
T Consensus 7 ~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~-~D~g~Y~C 83 (214)
T 1ow0_A 7 SLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPW-NHGKTFTC 83 (214)
T ss_dssp EEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHH-HHTCEEEE
T ss_pred EEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHc-CCCCeEEE
Confidence 344466778899999999999999854 69999 4 4443211000 00 0111 345799999988 89999999
Q ss_pred EEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCeE
Q psy2775 633 VATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGEDL 712 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~~ 712 (785)
.|.|..+....+..|.+. .+..+|.+....+....+..|+.+
T Consensus 84 ~~~~~~~~~~~~~~i~~~--------------------------------------~~~~~P~v~~~~~~~~~~~~g~~~ 125 (214)
T 1ow0_A 84 TAAYPESKTPLTATLSKS--------------------------------------GNTFRPEVHLLPPPSEELALNELV 125 (214)
T ss_dssp EECCSSCSSCEEEEEECC--------------------------------------SSCCCCEEEEECCCTTTTTSSSEE
T ss_pred EEecCCCCCceeEeeccC--------------------------------------CCCCCCEEEecCCCHHHhccCCce
Confidence 999988754333333210 112344443222222235679999
Q ss_pred EEEEEEecC-CC-CceEEeECCEEeeecccccc--chh---hh---cccccceeeee---eceEEEEEEeccc----cee
Q psy2775 713 KIEVRFKAL-PP-PKAEWTVNGTVIVPSKRVKG--KAE---FI---KKLDDLEVKER---ENAVLEVEVTSDK----ADV 775 (785)
Q Consensus 713 ~l~C~~~g~-P~-p~i~W~~~~~~~~~~~~~~~--~~~---~~---~~l~~~~v~~~---~~~~~~c~~~~~~----~~~ 775 (785)
+|.|.+.|+ |+ +.|+|++||..+..+..... ... -. .......+... +.+.|+|.|.++. ..+
T Consensus 126 ~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~~~~~~ 205 (214)
T 1ow0_A 126 TLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPLAFTQ 205 (214)
T ss_dssp EEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCTTSEEC
T ss_pred EEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCCCCceE
Confidence 999999995 54 49999999999876631111 111 00 01111233443 3789999999844 246
Q ss_pred EEee
Q psy2775 776 KWFK 779 (785)
Q Consensus 776 ~w~~ 779 (785)
.|..
T Consensus 206 ~~~~ 209 (214)
T 1ow0_A 206 KTID 209 (214)
T ss_dssp CEEC
T ss_pred EEEE
Confidence 7764
No 422
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=1.3e-14 Score=126.33 Aligned_cols=85 Identities=24% Similarity=0.364 Sum_probs=72.8
Q ss_pred eeeeeeeecCeEEEEEEEecCCCCceEEEeCC----------------------------EEe-cCCCCeeEEeeCCeEE
Q psy2775 565 FEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN----------------------------KPL-LSSPKKREIFDGENII 615 (785)
Q Consensus 565 ~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~----------------------------~~i-~~~~~~~~~~~~~~~~ 615 (785)
+++..+.+|++++|.|.+.|.|.|.|+|+|++ ..+ ....+..+...+..++
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 35788999999999999999999999999999 454 2344555666667789
Q ss_pred EEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 616 LELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 616 L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
|+|.++.. +|+|.|+|.|.|..|....++.|.|.
T Consensus 105 L~I~~v~~-~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEK-EDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCT-TTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCc-ccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 99999999 99999999999999999888888773
No 423
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.54 E-value=9e-14 Score=131.96 Aligned_cols=166 Identities=14% Similarity=0.164 Sum_probs=107.9
Q ss_pred ccCCCeEEecCCcEEEEEEEeCCCceEEEEECC--E---Ec-------ccCCCEEEEEe---CcEEEEEEccCCCCCcEE
Q psy2775 420 VPLQDVKVSRDEKASFEIELTKGDALVKWYKDG--K---EI-------AFSENVTLSID---GKKQKLIIFSAGLEDAGE 484 (785)
Q Consensus 420 ~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~--~---~~-------~~~~~~~~~~~---~~~~~L~i~~~~~~d~G~ 484 (785)
..+..+.+.+|++++|.|.+.+..+.+.|+|.. . .+ ....++.+..+ .....|+|.+++.+|+|.
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~ 85 (207)
T 1ypz_E 6 QSPSALSLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGT 85 (207)
T ss_dssp ESCSEEEEETTCCEEEEEEESSCCSEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEE
T ss_pred ECCCeEEEccCCcEEEEEEEeCCCeEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEE
Confidence 345667899999999999998755689999843 1 11 12356666655 556789999999999999
Q ss_pred EEEEEeec-Cc-----------ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccCC
Q psy2775 485 YSCRVGDT-GD-----------KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCPL 552 (785)
Q Consensus 485 Y~C~a~n~-g~-----------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~ 552 (785)
|.|.+.+. +. ......|.|......
T Consensus 86 Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~------------------------------------------- 122 (207)
T 1ypz_E 86 YFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQP------------------------------------------- 122 (207)
T ss_dssp EEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCC-------------------------------------------
T ss_pred EEEEEecCCcccccccccceeeecCccEEEEccCCCC-------------------------------------------
Confidence 99999985 21 113457777642100
Q ss_pred CCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CC-CceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeE
Q psy2775 553 GSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PA-PSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDY 630 (785)
Q Consensus 553 ~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~-p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y 630 (785)
..+|.+.. ..+ .++|.|.+.|. |. |.|+|+++ ..+...........++.+.+. .....+|.|.|
T Consensus 123 ---~~~P~v~~-------~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~~~~~~~~~g~y~~~--~~~~~~~~~~y 188 (207)
T 1ypz_E 123 ---PAKPSVFI-------MKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEFDPAIVISPSGKYSAV--KLGQYGDSNSV 188 (207)
T ss_dssp ---CCCCEEEE-------EEE-TTEEEEEEEEESSSCCEEEEECS-SEEEECCCEEEECTTSSEEEE--ECEEESSTTTC
T ss_pred ---CCCCeEEE-------eCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCCccceEEcCCCcEEEE--EeecccCCCcE
Confidence 00122221 111 27999999985 55 69999999 776544322222233444333 33221578999
Q ss_pred EEEEEcCCcceE
Q psy2775 631 KVVATNELGSAT 642 (785)
Q Consensus 631 ~C~a~n~~g~~~ 642 (785)
+|.|.|..+...
T Consensus 189 tC~v~~~~~~~~ 200 (207)
T 1ypz_E 189 TCSVQHNSETVH 200 (207)
T ss_dssp EEEEEETTEEEE
T ss_pred EEEEEECCccEe
Confidence 999999987544
No 424
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.54 E-value=4.2e-14 Score=136.59 Aligned_cols=173 Identities=13% Similarity=0.162 Sum_probs=112.1
Q ss_pred cCCceEecCCCeEEEEEEEEec--CCCeeEEEECC--E---Ec---c-----------CCCCEEEeecCCccceEEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAV--PEPDLLWYYNG--E---PL---Q-----------ETDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~--p~~~i~W~~~~--~---~~---~-----------~~~~~~~~~~~~~~~~~~~L~i 76 (785)
.|..+.+.+|++|+|.|.+.+. +...+.||+.. . .+ . ...|+.+..+.. .....|+|
T Consensus 6 q~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I 83 (226)
T 3mlr_H 6 ESGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKS--ISTAYLQW 83 (226)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGG--GTEEEEEE
T ss_pred cCCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCC--CCEEEEEE
Confidence 3446899999999999999763 34689999842 1 11 0 012344333221 12356999
Q ss_pred cccCCCCCeEEEEEEEcCCe-------eE--EEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-C-CCeE
Q psy2775 77 KSIKKREEGVYTVVAKNREG-------EA--KMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-P-SPKV 145 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~~~-------~~--~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p-~~~v 145 (785)
.+++.+|+|.|.|.+.+..+ .. .....|.|......+|.+........+..|+.+.|.|.+.+. | .+.+
T Consensus 84 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v 163 (226)
T 3mlr_H 84 TTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTV 163 (226)
T ss_dssp SSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEE
T ss_pred CCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEE
Confidence 99999999999999986431 11 122356665544556766543334445689999999999874 4 4589
Q ss_pred EEeECCEEcccce-----EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEE
Q psy2775 146 EWYKDGKLIKDRQ-----ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESA 195 (785)
Q Consensus 146 ~W~~~g~~~~~~~-----~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 195 (785)
.| ++..+.... ....++ .+.|.|.....+| |.|+|.|.|..+.....
T Consensus 164 ~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~ 219 (226)
T 3mlr_H 164 SW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVD 219 (226)
T ss_dssp EE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEE
T ss_pred EE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCCCcCeE
Confidence 99 443332211 111111 3478899988889 99999999987654433
No 425
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.54 E-value=4.4e-14 Score=118.31 Aligned_cols=99 Identities=24% Similarity=0.419 Sum_probs=84.8
Q ss_pred cccccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCC
Q psy2775 5 ADILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREE 84 (785)
Q Consensus 5 ~~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 84 (785)
.......||.|...+..+.+.+|++++|.|.+.|.|.+.+.|++++..+....++.+..++. ..+|.|.+++.+|+
T Consensus 6 ~~~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~----~~~L~i~~~~~~D~ 81 (107)
T 3irg_B 6 SSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGA----EHGLLLTAALPTDA 81 (107)
T ss_dssp ----CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETT----EEEEEESSCCGGGC
T ss_pred ecCCCCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCC----EEEEEEccCCHHhC
Confidence 34556789999999999999999999999999999999999999999998877776655443 24699999999999
Q ss_pred eEEEEEEEcCCeeEEEEeeEEEe
Q psy2775 85 GVYTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 85 G~Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
|.|+|.|.|..|.....+.|.|.
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 82 GVYVCRARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEEEcCCCcEEEEEEEEEE
Confidence 99999999999998888888886
No 426
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=2.5e-14 Score=118.05 Aligned_cols=92 Identities=24% Similarity=0.416 Sum_probs=78.2
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
..+|.|...+....+.+|+.++|.|.+.|+|.|.+.|+|++..+........... ..+|.|.++.. +|+|.|+|.|.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~-~d~G~Y~C~a~ 82 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQE--QGTLQIKNLRI-SDTGTYTCVAT 82 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECT--TCCEEEESCCT-TTCCEEEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcC--CCEEEEccCCc-ccCEEEEEEEE
Confidence 3468999888999999999999999999999999999999998874333322222 23699999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|..|....++.|.|.
T Consensus 83 n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 83 SSSGETSWSAVLDVT 97 (100)
T ss_dssp CSSCCCBCCEEEEEE
T ss_pred cCCCCEEEEEEEEEe
Confidence 999999888888886
No 427
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.54 E-value=7.5e-14 Score=118.36 Aligned_cols=99 Identities=28% Similarity=0.413 Sum_probs=85.4
Q ss_pred cccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC-CCCEEEeecCCccceEEEEEEcccCCCCCe
Q psy2775 7 ILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE-TDEVVFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 7 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
.....+|.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+.. ..++.+...+. ..++|+|.+++.+|+|
T Consensus 10 ~~~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~---~~~~L~I~~v~~~D~G 86 (116)
T 2kkq_A 10 HEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNT---GRVTLLIKDVNKKDAG 86 (116)
T ss_dssp CCCCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTT---CEEEEEEEEECGGGCE
T ss_pred cCCCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCC---CeEEEEECCCCcccCE
Confidence 4456799999999999999999999999999999999999999998875 45666655443 2346999999999999
Q ss_pred EEEEEEEcCCeeEEEEeeEEEeC
Q psy2775 86 VYTVVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~~~~v~v~~ 108 (785)
.|+|.|.|..|.....+.|.|..
T Consensus 87 ~Y~C~a~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 87 WYTVSAVNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEcCCCeEEEEEEEEEeC
Confidence 99999999999998888888874
No 428
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=4e-14 Score=117.80 Aligned_cols=107 Identities=18% Similarity=0.264 Sum_probs=86.1
Q ss_pred CcccccccCCCCeeeecCCceEecCCCeEEEEEEEEec---CCCeeEEEECCE-EccC--CCCEEEee--cCCccceEEE
Q psy2775 2 SSLADILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAV---PEPDLLWYYNGE-PLQE--TDEVVFSD--QSDMHSYVSI 73 (785)
Q Consensus 2 ~s~~~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~---p~~~i~W~~~~~-~~~~--~~~~~~~~--~~~~~~~~~~ 73 (785)
||.+.-+.+.++.|...|.++.|.+|++++|.|.+.|. |.|.|.|||+.. .+.. ..++.+.. ......+.+.
T Consensus 2 ~~~~~~~~~~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (118)
T 2edn_A 2 SSGSSGAEEPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVE 81 (118)
T ss_dssp CCCCCCCCCCSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEE
T ss_pred CCCCCCccCCcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEE
Confidence 67888888999999999999999999999999999875 689999999742 2221 23444432 2222224577
Q ss_pred EEEcccCCCCCeEEEEEEEcCCeeEEEEeeEEEeC
Q psy2775 74 VTIKSIKKREEGVYTVVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 74 L~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~ 108 (785)
|+|.+++.+|+|.|+|+|.|..|..+..+.|.|..
T Consensus 82 L~I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 82 LHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp EEESSCCTTTCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred EEEeeCChhhCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 99999999999999999999999999999998863
No 429
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.53 E-value=4.8e-14 Score=116.95 Aligned_cols=90 Identities=24% Similarity=0.508 Sum_probs=76.8
Q ss_pred CCCCe-EeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCC--CeeEEeeCCeEEEEEccCCCCCCceeEEE
Q psy2775 556 GQAPL-FIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSP--KKREIFDGENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 556 ~~~p~-~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~--~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C 632 (785)
+.+|. |...+.++.+.+|++++|.|.+.| |.|.|.|+|++..+..+. ++.+..++...+|.|.++.. +|+|.|+|
T Consensus 4 g~~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C 81 (103)
T 1x44_A 4 GSSGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATK-ADAAEYSV 81 (103)
T ss_dssp CCSSCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECT-TTCSEEEE
T ss_pred CCCCceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCc-ccCEEEEE
Confidence 33444 788888999999999999999988 779999999999998877 56777778888999999999 99999999
Q ss_pred EEEcCCcceEEEEEEEEEe
Q psy2775 633 VATNELGSATHGARVTVDV 651 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V~~ 651 (785)
.|.| ...++.|.|..
T Consensus 82 ~a~n----~~~~~~l~V~~ 96 (103)
T 1x44_A 82 MTTG----GQSSAKLSVDL 96 (103)
T ss_dssp EETT----EEEEEEEEEEC
T ss_pred EECC----CcEEEEEEEeC
Confidence 9988 46667777763
No 430
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.53 E-value=8.3e-14 Score=114.72 Aligned_cols=94 Identities=16% Similarity=0.349 Sum_probs=83.6
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|...+..+.+.+|++++|.|.+.|.|.+.+.|++++..+....++.+...++. .+|.|.+++.+|+|.|+|
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~----~~L~i~~~~~~d~G~Y~C 79 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGG----FFLEIHKTDTSDSGLYTC 79 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTE----EEEEECSCCGGGCEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCE----EEEEECCCCcccCEEEEE
Confidence 4689999999999999999999999999999999999999999988888777655432 569999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEe
Q psy2775 90 VAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~ 107 (785)
.|.|..|.....+.|.|.
T Consensus 80 ~a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 80 TVKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCcEeEEEEEEEE
Confidence 999999998888888775
No 431
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.53 E-value=6.9e-14 Score=136.84 Aligned_cols=179 Identities=13% Similarity=0.150 Sum_probs=111.8
Q ss_pred CCCeEEecCCcEEEEEEEeC---CCceEEEEECC--EE---c--------------ccCCCEEEEEe--CcEEEEEEccC
Q psy2775 422 LQDVKVSRDEKASFEIELTK---GDALVKWYKDG--KE---I--------------AFSENVTLSID--GKKQKLIIFSA 477 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~~---~--------------~~~~~~~~~~~--~~~~~L~i~~~ 477 (785)
+..+.+.+|++++|.|.+.+ +...+.|++.. .. + ...+++.+..+ .....|+|.++
T Consensus 6 ~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (248)
T 3u2s_H 6 SGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSL 85 (248)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 45677889999999999986 24579999732 11 1 01245666554 34678999999
Q ss_pred CCCCcEEEEEEEeecC-----------------------cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecC
Q psy2775 478 GLEDAGEYSCRVGDTG-----------------------DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSS 534 (785)
Q Consensus 478 ~~~d~G~Y~C~a~n~g-----------------------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 534 (785)
+.+|+|.|.|.+.+.+ .......|.|....
T Consensus 86 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~--------------------------- 138 (248)
T 3u2s_H 86 RVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSAS--------------------------- 138 (248)
T ss_dssp CGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCC---------------------------
T ss_pred CHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccC---------------------------
Confidence 9999999999998731 01112444444210
Q ss_pred CceeeEEeecccccccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-C-CCceEEEeCCEEecCCCCeeEEeeCC
Q psy2775 535 PDIQVKWLNLFIVPTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-P-APSIVWFRNNKPLLSSPKKREIFDGE 612 (785)
Q Consensus 535 ~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P-~p~v~W~~~~~~i~~~~~~~~~~~~~ 612 (785)
..+|.+........+..|+.++|.|.+.|. | .+.+.|++++..+...........++
T Consensus 139 ---------------------~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g 197 (248)
T 3u2s_H 139 ---------------------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSG 197 (248)
T ss_dssp ---------------------CBCCEEEEECCC------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTS
T ss_pred ---------------------CCCCEEEEeCCCccccCCCcEEEEEEEeeEECCCeEEEEeECCccCceeecCceECCCC
Confidence 012444433333445679999999999985 5 34799999986432111111111112
Q ss_pred ----eEEEEEccCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 613 ----NIILELKEADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 613 ----~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.+.|.|..... +| |.|+|.|.|..+.......|.+.
T Consensus 198 ~~~~~s~L~i~~~~~-~~-~~ytC~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 198 LYSLSSVVTVPSSSL-GT-QTYICNVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp CEEEEEEEEEEGGGB-TT-BCCEEEEEEGGGTEEEEEECCC-
T ss_pred CEEEEEEEEEChhhc-CC-CeEEEEEEECCCCcceEEEEccC
Confidence 24688888877 77 99999999998887766665543
No 432
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.52 E-value=2e-14 Score=117.17 Aligned_cols=87 Identities=24% Similarity=0.300 Sum_probs=75.6
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+|.|...+....+.+|+.++|.|.+.|.| |.+.|+|+|..+..+.++.+. ...|.|.++.. +|+|.|+|.|.|
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~-~D~G~Y~C~a~n 81 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT----GEEVEVRDSIP-ADSGLYACVTSS 81 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----SSEEEESSCCG-GGSEEEEEEEEE
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----CCEEEECCCCh-HHCEEEEEEecc
Confidence 457888888899999999999999999998 899999999998766654332 34799999999 999999999999
Q ss_pred CCcceEEEEEEEE
Q psy2775 637 ELGSATHGARVTV 649 (785)
Q Consensus 637 ~~g~~~~~~~l~V 649 (785)
..|....++.|.|
T Consensus 82 ~~g~~~~~~~l~V 94 (95)
T 2ckn_A 82 PSGSDTTYFSVNV 94 (95)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEE
Confidence 9999888888776
No 433
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.52 E-value=9.3e-14 Score=114.37 Aligned_cols=95 Identities=21% Similarity=0.393 Sum_probs=80.2
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTV 89 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 89 (785)
..||.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+....+.......+ ...+|.|.+++.+|+|.|+|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~---~~~~L~i~~~~~~D~G~Y~C 79 (99)
T 1u2h_A 3 KAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEG---GLCRLRILAAERGDAGFYTC 79 (99)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGG---GEEEEEESSCCGGGCEEEEE
T ss_pred CCCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCC---CEEEEEEccCCcCCCEEEEE
Confidence 358999999999999999999999999999999999999999887665433322221 22469999999999999999
Q ss_pred EEEcCCeeEEEEeeEEEe
Q psy2775 90 VAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 90 ~a~~~~~~~~~~~~v~v~ 107 (785)
.|.|..|.....+.|.|.
T Consensus 80 ~a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 80 KAVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEECCCceeEEEEEEEE
Confidence 999999998888888875
No 434
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.52 E-value=6.9e-14 Score=125.66 Aligned_cols=92 Identities=29% Similarity=0.495 Sum_probs=82.7
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEee-CCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFD-GENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~-~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
+|.|...+.+..+.+|+.++|.|.+.|+|.|.|.|+|++..+..+.++.+... ++..+|.|.++.. +|+|.|+|.|.|
T Consensus 41 ~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~N 119 (154)
T 1fhg_A 41 KPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCG-DDDAKYTCKAVN 119 (154)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCG-GGCEEEEEEEEE
T ss_pred CCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCCh-hcCEEEEEEEEE
Confidence 58898888899999999999999999999999999999999987777665543 4567899999999 999999999999
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
..|....++.|.|.
T Consensus 120 ~~G~~~~~~~l~V~ 133 (154)
T 1fhg_A 120 SLGEATCTAELLVE 133 (154)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEe
Confidence 99999988888887
No 435
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.52 E-value=1.5e-13 Score=133.19 Aligned_cols=175 Identities=14% Similarity=0.185 Sum_probs=115.0
Q ss_pred CeEEecCCcEEEEEEEeC---CCceEEEEECC--E---Ec--------------ccCCCEEEEEeC--cEEEEEEccCCC
Q psy2775 424 DVKVSRDEKASFEIELTK---GDALVKWYKDG--K---EI--------------AFSENVTLSIDG--KKQKLIIFSAGL 479 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~---~~~~i~W~~~~--~---~~--------------~~~~~~~~~~~~--~~~~L~i~~~~~ 479 (785)
.+.+.+|++++|.|.+.+ ....+.|++.. . .+ ...+++.+..+. ....|+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (230)
T 3n9g_H 9 AEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRS 88 (230)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCh
Confidence 567889999999999976 24579999732 1 11 012466665544 467899999999
Q ss_pred CCcEEEEEEEeecCc---------ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeeccccccc
Q psy2775 480 EDAGEYSCRVGDTGD---------KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTC 550 (785)
Q Consensus 480 ~d~G~Y~C~a~n~g~---------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 550 (785)
+|+|.|.|.+.+.+. ......|.|...+.
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------------------ 126 (230)
T 3n9g_H 89 EDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAST------------------------------------------ 126 (230)
T ss_dssp GGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCC------------------------------------------
T ss_pred hhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCC------------------------------------------
Confidence 999999999987431 11234566653210
Q ss_pred CCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-C-CCceEEEeCCEEecCCCCe--eEEeeCC----eEEEEEccCC
Q psy2775 551 PLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-P-APSIVWFRNNKPLLSSPKK--REIFDGE----NIILELKEAD 622 (785)
Q Consensus 551 ~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P-~p~v~W~~~~~~i~~~~~~--~~~~~~~----~~~L~i~~~~ 622 (785)
.+|.+........+.+|+.++|.|.+.|. | .+.+.| ++..+..+... .....++ .+.|.|....
T Consensus 127 ------~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~ 198 (230)
T 3n9g_H 127 ------KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSS 198 (230)
T ss_dssp ------BCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTT
T ss_pred ------CCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHH
Confidence 11444332333445689999999999985 4 346999 66554321110 0111112 2478999988
Q ss_pred CCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 623 SETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 623 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
. +| |.|+|.|.|..+.......|.|.
T Consensus 199 ~-~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 199 L-GT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp B-TT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred c-CC-CeEEEEEEECCCCcceEEEccCC
Confidence 7 88 99999999998887776666654
No 436
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=4.2e-14 Score=120.70 Aligned_cols=93 Identities=24% Similarity=0.411 Sum_probs=78.6
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
..+|.|...+.+..+.+|+.++|.|.+.|+|.|.|.|+|+|..+...........++ +|.|.++.. +|+|.|+|.|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~--~L~i~~v~~-~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG--VLQIRYAKL-GDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT--EEEEESCCG-GGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC--EEEEccCCc-CCCEEEEEEEE
Confidence 346888888889999999999999999999999999999999886533333333333 699999999 99999999999
Q ss_pred cCCcceEEEEEEEEEe
Q psy2775 636 NELGSATHGARVTVDV 651 (785)
Q Consensus 636 n~~g~~~~~~~l~V~~ 651 (785)
|..|....++.|.|..
T Consensus 83 n~~g~~~~~~~l~V~~ 98 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQE 98 (118)
T ss_dssp CSSCEEEEECCEEEEC
T ss_pred cCCCcEEEEEEEEEEe
Confidence 9999988888888763
No 437
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.51 E-value=3.8e-14 Score=111.31 Aligned_cols=82 Identities=29% Similarity=0.491 Sum_probs=74.8
Q ss_pred CCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecCcceeEEEE
Q psy2775 422 LQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTGDKESKATL 501 (785)
Q Consensus 422 ~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g~~~~~~~l 501 (785)
+.++.+.+|+.+.|.|.+.+|.|.|.|+|||.++..+.++.+..++....|.|.+++.+|+|.|+|.|.| ...++.|
T Consensus 3 lt~v~~~~G~~v~l~C~vs~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n---~~~~a~l 79 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSGPGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ---DSRIFLV 79 (84)
T ss_dssp CCCEEECTTSCEEEECCCSCCSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT---TCEEEEE
T ss_pred CeEEEEecCCCEEEEEEECCCCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC---EEEEEEE
Confidence 4577889999999999998888899999999999999999999998889999999999999999999977 7788999
Q ss_pred EEEcC
Q psy2775 502 TVEAP 506 (785)
Q Consensus 502 ~V~~~ 506 (785)
+|++|
T Consensus 80 ~V~eP 84 (84)
T 2lu7_A 80 SVEEP 84 (84)
T ss_dssp EECCC
T ss_pred EEECC
Confidence 99764
No 438
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.51 E-value=4.5e-14 Score=117.79 Aligned_cols=91 Identities=16% Similarity=0.219 Sum_probs=80.7
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
..+|.|...+.+..+.+|++++|.|.+.|.|.+ +.|+|++..+..+.++.+..++...+|.|.++.. +|+|.|+|.|.
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~ 83 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRP-EDEGDYTFVPD 83 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCT-TTCSCEEEEEE
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCc-CCCEEEEEEEc
Confidence 346899999999999999999999999999988 9999999999888888888888888999999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|. ....++.|.|.
T Consensus 84 n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 84 GY--ALSLSAKLNFL 96 (106)
T ss_dssp TS--CCCCCBCEEEE
T ss_pred cC--CceEEEEEEEE
Confidence 98 44556677765
No 439
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.51 E-value=6.6e-14 Score=115.53 Aligned_cols=94 Identities=26% Similarity=0.499 Sum_probs=79.9
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.||.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+....+..+....+ ...+|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y~C~ 80 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEK---GLHSLIFEVVRASDAGAYACV 80 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETT---TEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCC---CeEEEEECCCCcccCEEEEEE
Confidence 58999999999999999999999999999999999999999887765433322221 124699999999999999999
Q ss_pred EEcCCeeEEEEeeEEEe
Q psy2775 91 AKNREGEAKMDIPVKVN 107 (785)
Q Consensus 91 a~~~~~~~~~~~~v~v~ 107 (785)
|.|..|.....+.|.|.
T Consensus 81 a~n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 81 AKNRAGEATFTVQLDVL 97 (100)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEEE
Confidence 99999998888888886
No 440
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.51 E-value=5.5e-14 Score=118.14 Aligned_cols=79 Identities=23% Similarity=0.300 Sum_probs=66.6
Q ss_pred eecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeC-------CeEEEEEccCCCCCCceeEEEEEEcCCcceEE
Q psy2775 571 KEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDG-------ENIILELKEADSETDAGDYKVVATNELGSATH 643 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~-------~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 643 (785)
..+..+.|.|.+.|+|.|+|+|+|||++|..+.+....... ..++|.|.++.. .|+|.|+|.|.|.+|....
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~-~D~G~YtC~A~N~~G~~~~ 91 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTH-VNNGNYTLLAANPFGQASA 91 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCG-GGCEEEEEEEEETTEEEEE
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCC-CCCEEEEEEEEECCCeEEE
Confidence 36678999999999999999999999999887765444321 246899999999 9999999999999999887
Q ss_pred EEEEEEE
Q psy2775 644 GARVTVD 650 (785)
Q Consensus 644 ~~~l~V~ 650 (785)
++.|.|.
T Consensus 92 t~~l~v~ 98 (126)
T 1he7_A 92 SIMAAFM 98 (126)
T ss_dssp EEEECCC
T ss_pred EEEEEEE
Confidence 7777664
No 441
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=5.5e-14 Score=116.39 Aligned_cols=89 Identities=21% Similarity=0.252 Sum_probs=79.2
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCC-ceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAP-SIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p-~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
.+|.|...+.+..+.+|++++|.|.+.|.|.+ .+.|||||..+..+.++.+..++...+|.|.++.. +|+|.|+|.|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~ 85 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAP-SDAGEVVFSVR 85 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCT-TTCSCEEEEET
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCH-HHCEEEEEEEC
Confidence 35788888899999999999999999998854 89999999999888888888888889999999999 99999999985
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
| ...++.|.|+
T Consensus 86 ~----~~~~a~L~V~ 96 (104)
T 2eny_A 86 G----LTSKASLIVR 96 (104)
T ss_dssp T----EEEEECEEEE
T ss_pred C----eeEEEEEEEe
Confidence 4 5677888887
No 442
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=4.3e-14 Score=116.37 Aligned_cols=94 Identities=24% Similarity=0.390 Sum_probs=79.9
Q ss_pred ccccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCe
Q psy2775 6 DILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 6 ~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
......||.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+....... . . ...+|+|.+++.+|+|
T Consensus 5 ~~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~-~-~-----~~~~L~i~~v~~~D~G 77 (99)
T 2yr3_A 5 SSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTC-E-A-----GVAELHIQDALPEDHG 77 (99)
T ss_dssp CSCCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCCEE-E-T-----TEEEEEECSCCTTCCB
T ss_pred cCCcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccceEe-e-C-----CeEEEEECCCChhhCE
Confidence 4556689999999999999999999999999999999999999998876554321 1 1 1256999999999999
Q ss_pred EEEEEEEcCCeeEEEEeeEEE
Q psy2775 86 VYTVVAKNREGEAKMDIPVKV 106 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~~~~v~v 106 (785)
.|+|.|.|..|.....+.|.|
T Consensus 78 ~Y~C~a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 78 TYTCLAENALGQVSCSAWVTV 98 (99)
T ss_dssp CEEEEEECSSCEEEEECCEEE
T ss_pred EEEEEEEECCCeEEEEEEEEE
Confidence 999999999999888877776
No 443
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=9.9e-14 Score=113.71 Aligned_cols=92 Identities=24% Similarity=0.325 Sum_probs=84.2
Q ss_pred cCCcccccCCCeEEecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEeecC
Q psy2775 414 LPPEISVPLQDVKVSRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGDTG 493 (785)
Q Consensus 414 ~~~~~~~~~~~~~v~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~g 493 (785)
.|+.+..++.+..+.+|+.+.|.|.+ .+.+.+.|+|+|..+..+.++.+..++....|.|.++..+|+|.|+|.|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v-~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~- 83 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI-SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY- 83 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC-SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS-
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe-CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC-
Confidence 46788888899999999999999999 8888999999999999999999998888889999999999999999999997
Q ss_pred cceeEEEEEEEcCc
Q psy2775 494 DKESKATLTVEAPA 507 (785)
Q Consensus 494 ~~~~~~~l~V~~~~ 507 (785)
....++.|.|..+|
T Consensus 84 ~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 84 NVTLPAKVHVISGP 97 (100)
T ss_dssp CCCEEEEEEEECCS
T ss_pred CeeEEEEEEEeCCC
Confidence 55778999999875
No 444
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.51 E-value=1.7e-13 Score=123.06 Aligned_cols=101 Identities=22% Similarity=0.394 Sum_probs=87.6
Q ss_pred cccccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCC
Q psy2775 5 ADILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREE 84 (785)
Q Consensus 5 ~~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 84 (785)
+.+....||.|...+..+.+.+|++++|.|.+.|.|.+.|.|++++..+....++.+....+. ..+|+|.+++.+|+
T Consensus 34 ~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~---~~~L~I~~v~~~D~ 110 (154)
T 1fhg_A 34 AEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEG---NCSLTISEVCGDDD 110 (154)
T ss_dssp CCCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTC---EEEEEESSCCGGGC
T ss_pred hcccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCC---eEEEEECCCChhcC
Confidence 345566789999999999999999999999999999999999999999988777776543321 25699999999999
Q ss_pred eEEEEEEEcCCeeEEEEeeEEEeC
Q psy2775 85 GVYTVVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 85 G~Y~C~a~~~~~~~~~~~~v~v~~ 108 (785)
|.|+|.|.|..|.....+.|.|..
T Consensus 111 G~Y~C~a~N~~G~~~~~~~l~V~~ 134 (154)
T 1fhg_A 111 AKYTCKAVNSLGEATCTAELLVET 134 (154)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEECCCeEEEEEEEEEeC
Confidence 999999999999998888888873
No 445
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.50 E-value=5e-14 Score=112.63 Aligned_cols=87 Identities=33% Similarity=0.572 Sum_probs=76.5
Q ss_pred cCCcccccCCCeEE--ecCCcEEEEEEEeCCCceEEEEECCEEcccCCCEEEEEeCcEEEEEEccCCCCCcEEEEEEEee
Q psy2775 414 LPPEISVPLQDVKV--SRDEKASFEIELTKGDALVKWYKDGKEIAFSENVTLSIDGKKQKLIIFSAGLEDAGEYSCRVGD 491 (785)
Q Consensus 414 ~~~~~~~~~~~~~v--~~g~~~~l~C~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 491 (785)
.|+.|..+..+..+ .+|+.+.|.|.+.++.+.++|+|||.++..+.++.+..++....|.|.++..+|+|.|+|.|.|
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDREDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSCTTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECCCCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 57777777776554 5899999999998888899999999999999999999999999999999999999999999988
Q ss_pred cCcceeEEEEEE
Q psy2775 492 TGDKESKATLTV 503 (785)
Q Consensus 492 ~g~~~~~~~l~V 503 (785)
...++.|+|
T Consensus 83 ---~~~~~~ltV 91 (91)
T 2lvc_A 83 ---ECAYFTVTI 91 (91)
T ss_dssp ---CEEEEEEEC
T ss_pred ---eEEEEEEEC
Confidence 667777764
No 446
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.50 E-value=1.5e-13 Score=113.51 Aligned_cols=94 Identities=19% Similarity=0.479 Sum_probs=80.9
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC--CCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE--TDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
+.||.|...|..+.+.+|+++.|.|.+.|.|.+.+.|++++..+.. ..++.+...++ .++|.|.+++.+|+|.|
T Consensus 3 ~~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y 78 (100)
T 3irg_A 3 GIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDD----LTTLIIMDVQKQDGGLY 78 (100)
T ss_dssp CEEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSS----EEEEEESSCCGGGCEEE
T ss_pred CCCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCC----EEEEEEeecCcccCEEE
Confidence 4689999999999999999999999999999999999999998863 34555554432 25699999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEe
Q psy2775 88 TVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~ 107 (785)
+|.|.|..|.....+.|.|.
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 79 TLSLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCcEEEEEEEEEE
Confidence 99999999998888888775
No 447
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.50 E-value=2.9e-14 Score=149.12 Aligned_cols=172 Identities=15% Similarity=0.132 Sum_probs=109.2
Q ss_pred eeeeeeee-eeecCeEEEEEEEecC-CCC---ceEEEeCCEEecCCCC-eeEEeeC----CeEEEEEccCCCCCCceeEE
Q psy2775 562 IERFEEKT-VKEKGTIRLMAKVKAS-PAP---SIVWFRNNKPLLSSPK-KREIFDG----ENIILELKEADSETDAGDYK 631 (785)
Q Consensus 562 ~~~~~~~~-v~~g~~v~l~C~~~g~-P~p---~v~W~~~~~~i~~~~~-~~~~~~~----~~~~L~i~~~~~~~d~G~Y~ 631 (785)
+..+.... +.+|++++|.|.+.|+ |.| .|+|+|++..+..... ......+ ..+.|.|..+.. +|+|.|+
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~-~D~g~Y~ 249 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDW-LNGKEFK 249 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhc-cCCCEEE
Confidence 44444444 8899999999999998 433 6999999976643211 0111111 234799999988 9999999
Q ss_pred EEEEcCCcceEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCcCCCCCCcEEeecCCe
Q psy2775 632 VVATNELGSATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVIDPPPPPEVLVKKGED 711 (785)
Q Consensus 632 C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~~~~~~~~~~g~~ 711 (785)
|.|.|..+.......+.+. +.+..+|.+..... ......|+.
T Consensus 250 C~~~~~~~~~~~~~~v~~~-------------------------------------~~~~~~P~v~v~~~-~~~~~~g~~ 291 (376)
T 2aty_A 250 CRVNSAAFPAPIEKTISKT-------------------------------------KGRPKAPQLYTIPP-PKEQMAKDK 291 (376)
T ss_pred EEEecCCCCCceEEEEcCC-------------------------------------CCCCcCCeEEeeCC-CHHHhcCCc
Confidence 9999988754433333221 01224566554222 222345899
Q ss_pred EEEEEEEecCC--CCceEEeECCEEeeecccccc--ch--h--hhcccccceeeeeeceEEEEEEeccc
Q psy2775 712 LKIEVRFKALP--PPKAEWTVNGTVIVPSKRVKG--KA--E--FIKKLDDLEVKERENAVLEVEVTSDK 772 (785)
Q Consensus 712 ~~l~C~~~g~P--~p~i~W~~~~~~~~~~~~~~~--~~--~--~~~~l~~~~v~~~~~~~~~c~~~~~~ 772 (785)
++|.|.+.|++ .+.|+|+|||..+........ .. . ....|.+......+.+.|+|.|.+..
T Consensus 292 ~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~ 360 (376)
T 2aty_A 292 VSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEG 360 (376)
T ss_pred eEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCC
Confidence 99999999964 448999999998854332221 11 1 11234444444456899999999854
No 448
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=6.7e-14 Score=119.43 Aligned_cols=112 Identities=18% Similarity=0.278 Sum_probs=89.7
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC-CCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE-TDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
...||.|...+..+.+.+|++++|.|.+.|.|.+.+.|++++..+.. ..++.+...+ +|+|.+++.+|+|.|
T Consensus 5 ~~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~-------~L~i~~v~~~D~G~Y 77 (118)
T 2eo9_A 5 SSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG-------VLQIRYAKLGDTGRY 77 (118)
T ss_dssp CCCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT-------EEEEESCCGGGCCCE
T ss_pred CCCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC-------EEEEccCCcCCCEEE
Confidence 35689999999999999999999999999999999999999988864 3455444332 499999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCC
Q psy2775 88 TVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGE 129 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~ 129 (785)
+|.|.|..|.....+.|.|.. +..|.+...+.+..+.+|.
T Consensus 78 ~C~a~n~~g~~~~~~~l~V~~--~~~p~~~~~~~~~~~~~G~ 117 (118)
T 2eo9_A 78 TCIASTPSGEATWSAYIEVQE--FGVPVQPPRPTDPNLIPSA 117 (118)
T ss_dssp EEEEECSSCEEEEECCEEEEC--CSCCCCCCCCCCCCCCCCC
T ss_pred EEEEEcCCCcEEEEEEEEEEe--CCCCccCCCCCCCccCCCC
Confidence 999999999988888888874 2234444455555566654
No 449
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=3.4e-14 Score=118.20 Aligned_cols=93 Identities=18% Similarity=0.303 Sum_probs=74.3
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecC---CCCceEEEeCCE-EecC--CCCeeEE--eeC----CeEEEEEccCCCCC
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKAS---PAPSIVWFRNNK-PLLS--SPKKREI--FDG----ENIILELKEADSET 625 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~---P~p~v~W~~~~~-~i~~--~~~~~~~--~~~----~~~~L~i~~~~~~~ 625 (785)
.+.|+..++++.+.+|++++|.|.+.|. |.|.|.|||+.. .+.. +.+..+. +.+ ..+.|+|.++.. +
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~ 90 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL-G 90 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT-T
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh-h
Confidence 3778888999999999999999999985 789999999752 2221 1222221 111 257899999999 9
Q ss_pred CceeEEEEEEcCCcceEEEEEEEEEe
Q psy2775 626 DAGDYKVVATNELGSATHGARVTVDV 651 (785)
Q Consensus 626 d~G~Y~C~a~n~~g~~~~~~~l~V~~ 651 (785)
|+|.|+|+|+|..|..++++.|.|++
T Consensus 91 D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 91 DRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp TCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred hCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 99999999999999999999999974
No 450
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=8.4e-14 Score=115.53 Aligned_cols=89 Identities=19% Similarity=0.373 Sum_probs=78.2
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
..+|.|...+.+..+.+|+.++|.|.+.| |.+.+.|+|++..+..+.++.+..++...+|.|.++.. +|+|.|+|.|.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a~ 83 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASL-KDAGEYTCEVE 83 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCT-TTCSEEEEECS
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCc-ccCEEEEEEEc
Confidence 45688988899999999999999999998 88899999999999888888888888888999999999 99999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
| ...++.|.|.
T Consensus 84 n----~~~~~~l~V~ 94 (103)
T 2edf_A 84 A----SKSTASLHVE 94 (103)
T ss_dssp S----CEEEEEEEEC
T ss_pred c----CCcEEEEEEe
Confidence 9 3455666664
No 451
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.50 E-value=2.3e-14 Score=118.29 Aligned_cols=91 Identities=22% Similarity=0.402 Sum_probs=74.2
Q ss_pred CCeEeeee----eeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCee-EEeeCCeEEEEEccCCCCCCceeEEE
Q psy2775 558 APLFIERF----EEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKR-EIFDGENIILELKEADSETDAGDYKV 632 (785)
Q Consensus 558 ~p~~~~~~----~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~-~~~~~~~~~L~i~~~~~~~d~G~Y~C 632 (785)
+|.|...+ ....+.+|+.++|.|.+.|.|.|.+.|+|+|..+..+.+.. ........+|.|.++.. +|+|.|+|
T Consensus 4 ~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~-~D~G~Y~C 82 (100)
T 3caf_A 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVP-SDKGNYTC 82 (100)
T ss_dssp EEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCG-GGCEEEEE
T ss_pred CCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCc-CCCEEEEE
Confidence 57776543 46788999999999999999999999999999987654321 12333445799999999 99999999
Q ss_pred EEEcCCcceEEEEEEEE
Q psy2775 633 VATNELGSATHGARVTV 649 (785)
Q Consensus 633 ~a~n~~g~~~~~~~l~V 649 (785)
.|.|..|....++.|.|
T Consensus 83 ~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 83 VVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEETTEEEEEEEEEEE
T ss_pred EEEeCCCEEEEEEEEEE
Confidence 99999999888887776
No 452
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.49 E-value=5.7e-15 Score=126.99 Aligned_cols=92 Identities=20% Similarity=0.220 Sum_probs=75.8
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecCCCCc-eEEEeCCEEecC--CCCeeEE--eeCC--eEEEEEccCCCCCCc-eeE
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKASPAPS-IVWFRNNKPLLS--SPKKREI--FDGE--NIILELKEADSETDA-GDY 630 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~-v~W~~~~~~i~~--~~~~~~~--~~~~--~~~L~i~~~~~~~d~-G~Y 630 (785)
|.|.. +....+.+|+.++|.|.+.|.|.|. |.|+|++..+.. ..++.+. ..+. ..+|.|.++.. +|+ |.|
T Consensus 15 P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~~G~Y 92 (122)
T 2cry_A 15 PIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVR-ADFQTIY 92 (122)
T ss_dssp CCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCH-HHHHSCE
T ss_pred CCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCCh-hhCCceE
Confidence 66666 6778899999999999999999997 999999999875 3444442 2233 56899999999 998 999
Q ss_pred EEEEEcCCcceEEEEEEEEEee
Q psy2775 631 KVVATNELGSATHGARVTVDVE 652 (785)
Q Consensus 631 ~C~a~n~~g~~~~~~~l~V~~~ 652 (785)
+|.|.|..|.....+.|.|+..
T Consensus 93 ~C~a~N~~G~~~~~~~l~V~~~ 114 (122)
T 2cry_A 93 NCTAWNSFGSDTEIIRLKEQGS 114 (122)
T ss_dssp EEEEECSSCEEEEEECCCCSCS
T ss_pred EEEEECCCCeEEEEEEEEECCC
Confidence 9999999999998888887643
No 453
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=9.2e-14 Score=115.54 Aligned_cols=89 Identities=20% Similarity=0.275 Sum_probs=76.4
Q ss_pred CCCeEeeeeee---eeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEE
Q psy2775 557 QAPLFIERFEE---KTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 557 ~~p~~~~~~~~---~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
.+|.++..+.. ..+.+|+.++|.|.+.|.|.| +.|+|++..+..+.++.+...+...+|.|.+++. +|+|.|+|.
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~ 83 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKV-QDSGEFECR 83 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCT-TTCEEEEEE
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCCh-hhCEEEEEE
Confidence 35777766665 789999999999999999999 9999999999888888787788888999999999 999999999
Q ss_pred EEcCCcceEEEEEEEEEe
Q psy2775 634 ATNELGSATHGARVTVDV 651 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~~ 651 (785)
|.|..+ .+.|.|.+
T Consensus 84 a~n~~~----~~~l~V~~ 97 (104)
T 2e6p_A 84 TEGVSA----FFGVTVQD 97 (104)
T ss_dssp CSSCCC----CEEEEEEC
T ss_pred ECCceE----EEEEEEcC
Confidence 999754 55666653
No 454
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=7.1e-14 Score=117.67 Aligned_cols=97 Identities=23% Similarity=0.517 Sum_probs=83.5
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
...||.|...+..+.+.+|++++|.|.+.|.|.+.|.|++++..+....+..+....+. ..+|+|.+++.+|+|.|+
T Consensus 6 ~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~D~G~Y~ 82 (110)
T 2dm3_A 6 SGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENG---VHSLIIEPVTSRDAGIYT 82 (110)
T ss_dssp CCCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTS---CEEEEESSCCGGGCSBBC
T ss_pred CCCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCC---eEEEEEeeCCcccCEEEE
Confidence 35799999999999999999999999999999999999999998877665544433321 256999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEeC
Q psy2775 89 VVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~ 108 (785)
|.|.|..|.....+.|.|..
T Consensus 83 C~a~n~~g~~~~~~~l~V~~ 102 (110)
T 2dm3_A 83 CIATNRAGQNSFSLELVVAA 102 (110)
T ss_dssp EEEECSSCEEEECCEEEEEC
T ss_pred EEEECCCCEEEEEEEEEEeC
Confidence 99999999988888998874
No 455
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.49 E-value=9.3e-14 Score=114.83 Aligned_cols=79 Identities=23% Similarity=0.317 Sum_probs=65.5
Q ss_pred eecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEE-e-eC---CeEEEEEccCCCCCCceeEEEEEEcCCcceEEEE
Q psy2775 571 KEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREI-F-DG---ENIILELKEADSETDAGDYKVVATNELGSATHGA 645 (785)
Q Consensus 571 ~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~-~-~~---~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~ 645 (785)
..|..+.|.|.+.|+|.|.|+|+|+|..+..+.+.... . .+ ..++|.|.++.. +|+|.|+|.|.|..|....++
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~A~N~~G~~~~~~ 92 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTH-MNNGDYTLIAKNEYGKDEKQI 92 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCG-GGCEEEEEEEECSSCEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCc-ccCEEEEEEEEeCCCcEeEEE
Confidence 45788999999999999999999999999877553222 1 11 235699999999 999999999999999998888
Q ss_pred EEEEE
Q psy2775 646 RVTVD 650 (785)
Q Consensus 646 ~l~V~ 650 (785)
.|.|.
T Consensus 93 ~l~V~ 97 (103)
T 1wwb_X 93 SAHFM 97 (103)
T ss_dssp EECCS
T ss_pred EEEEC
Confidence 87775
No 456
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.49 E-value=1.2e-13 Score=115.62 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=73.5
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCC---CceEEEeCCEEecC---CCCeeEE--ee----CCeEEEEEccCCCCC
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPA---PSIVWFRNNKPLLS---SPKKREI--FD----GENIILELKEADSET 625 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~---p~v~W~~~~~~i~~---~~~~~~~--~~----~~~~~L~i~~~~~~~ 625 (785)
.|.|+..+..+.+.+|++++|.|.+.|.|. |.|.|||++..... +.++.+. .. .....|.|.+++. +
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~-~ 82 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQP-A 82 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCG-G
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCC-c
Confidence 488888889999999999999999999998 99999998732221 1222221 11 1256899999999 9
Q ss_pred CceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 626 DAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 626 d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
|+|.|+|.|.|..|...+++.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999999999885
No 457
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=3.9e-13 Score=127.56 Aligned_cols=164 Identities=18% Similarity=0.246 Sum_probs=102.4
Q ss_pred eeeeeeeeeecCeEEEEEEEecCCCCceEEEeCC--E---Eec-------CCCCeeEEee---CCeEEEEEccCCCCCCc
Q psy2775 563 ERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNN--K---PLL-------SSPKKREIFD---GENIILELKEADSETDA 627 (785)
Q Consensus 563 ~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~--~---~i~-------~~~~~~~~~~---~~~~~L~i~~~~~~~d~ 627 (785)
..+..+.+.+|++++|.|.+.+.+ +.+.|||.+ . .+. ...++....+ .+.++|+|.+++. +|+
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~-~D~ 83 (207)
T 1ypz_E 6 QSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQL-EDS 83 (207)
T ss_dssp ESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCG-GGC
T ss_pred ECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCH-HHC
Confidence 344577899999999999998765 489999953 1 111 2345555544 5667899999999 999
Q ss_pred eeEEEEEEcCCcc-----------eEEEEEEEEEeeccCCCCCccccccccccccccccCCCcceeeeeecCccccCCCc
Q psy2775 628 GDYKVVATNELGS-----------ATHGARVTVDVEKVGRPPINSIDIDRNHVHHLDNIDSPRQSTEVDVEKPVETAPVI 696 (785)
Q Consensus 628 G~Y~C~a~n~~g~-----------~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i 696 (785)
|.|.|.+.|..|. ....+.|.|.... ....+|.+
T Consensus 84 G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~-----------------------------------~~~~~P~v 128 (207)
T 1ypz_E 84 GTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKS-----------------------------------QPPAKPSV 128 (207)
T ss_dssp EEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCC-----------------------------------CCCCCCEE
T ss_pred EEEEEEEecCCcccccccccceeeecCccEEEEccCC-----------------------------------CCCCCCeE
Confidence 9999999987531 1123456664100 00122332
Q ss_pred CCCCCCcEEeecCCeEEEEEEEecC-CC-CceEEeECCEEeeecccc-ccchhhhcccccce-eeeeeceEEEEEEeccc
Q psy2775 697 DPPPPPEVLVKKGEDLKIEVRFKAL-PP-PKAEWTVNGTVIVPSKRV-KGKAEFIKKLDDLE-VKERENAVLEVEVTSDK 772 (785)
Q Consensus 697 ~~~~~~~~~~~~g~~~~l~C~~~g~-P~-p~i~W~~~~~~~~~~~~~-~~~~~~~~~l~~~~-v~~~~~~~~~c~~~~~~ 772 (785)
. +..+ .++|.|.+.|+ |. |.|+|+++ ..+...... ....+ ..+.... ....+.+.|+|.|.++.
T Consensus 129 ~--------~~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~~~~~~~~~~--g~y~~~~~~~~~~~~~ytC~v~~~~ 196 (207)
T 1ypz_E 129 F--------IMKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEFDPAIVISPS--GKYSAVKLGQYGDSNSVTCSVQHNS 196 (207)
T ss_dssp E--------EEEE-TTEEEEEEEEESSSCCEEEEECS-SEEEECCCEEEECTT--SSEEEEECEEESSTTTCEEEEEETT
T ss_pred E--------EeCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCCccceEEcCC--CcEEEEEeecccCCCcEEEEEEECC
Confidence 2 2222 27999999985 54 79999999 777644221 11111 1122222 23356799999999876
Q ss_pred cee
Q psy2775 773 ADV 775 (785)
Q Consensus 773 ~~~ 775 (785)
.++
T Consensus 197 ~~~ 199 (207)
T 1ypz_E 197 ETV 199 (207)
T ss_dssp EEE
T ss_pred ccE
Confidence 554
No 458
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=1.7e-13 Score=115.30 Aligned_cols=97 Identities=22% Similarity=0.367 Sum_probs=83.1
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC-CCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE-TDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
...||.|...+..+.+.+|++++|.|.+.|.|.+.|.|++++..+.. ..++.+....+ ...+|+|.+++.+|+|.|
T Consensus 5 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~---~~~~L~i~~v~~~D~G~Y 81 (110)
T 2dm2_A 5 SSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLD---GTCSLHTTASTLDDDGNY 81 (110)
T ss_dssp CSCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTT---CEEEEEESSCCTTTCSCC
T ss_pred CCCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCC---cEEEEEECCCChhhCEEE
Confidence 35789999999999999999999999999999999999999998875 45555554422 125699999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEeC
Q psy2775 88 TVVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~~ 108 (785)
+|.|.|..|.....+.|.|..
T Consensus 82 ~C~a~N~~g~~~~~~~l~V~~ 102 (110)
T 2dm2_A 82 TIMAANPQGRISCTGRLMVQA 102 (110)
T ss_dssp EEEEECTTCCEEECCCEEEEC
T ss_pred EEEEEECCCeEEEEEEEEEEC
Confidence 999999999998888888874
No 459
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.49 E-value=2.8e-13 Score=111.52 Aligned_cols=88 Identities=22% Similarity=0.393 Sum_probs=78.9
Q ss_pred CCCeEeeeeee-eeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 557 QAPLFIERFEE-KTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 557 ~~p~~~~~~~~-~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
.+|.|+..+.+ ..+.+|++++|.|.+. .|.|.+.|+|+|..+..+.++.+..++...+|.|.++.. +|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQM-TDDSEYYVTA- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECT-TTCCEEEEEE-
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCc-CcCEEEEEEE-
Confidence 47899988887 6889999999999999 799999999999999888888888888888999999999 9999999999
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|....++.|.|.
T Consensus 83 ---g~~~~~~~l~V~ 94 (100)
T 2yuv_A 83 ---GDEKCSTELFVR 94 (100)
T ss_dssp ---TTEEEEEEEEEC
T ss_pred ---CCceEEEEEEEe
Confidence 777888888886
No 460
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.48 E-value=2.4e-13 Score=110.70 Aligned_cols=87 Identities=21% Similarity=0.286 Sum_probs=78.1
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
.|.|...+.+..+.+|++++|.|.+ +.|.+.+.|+|++..+..+.++.+..++...+|.|.++.. +|+|.|+|.|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a--- 82 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGP-ADQGSYAVIA--- 82 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCT-TCCSEEEEEE---
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCc-ccCEEEEEEE---
Confidence 4778888889999999999999999 8899999999999999888888888888888999999999 9999999999
Q ss_pred CcceEEEEEEEEE
Q psy2775 638 LGSATHGARVTVD 650 (785)
Q Consensus 638 ~g~~~~~~~l~V~ 650 (785)
|....++.|.|.
T Consensus 83 -g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 -GSSKVKFDLKVI 94 (95)
T ss_dssp -TTEEEEEEEEEE
T ss_pred -CCceEEEEEEEe
Confidence 667777888775
No 461
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.48 E-value=4.7e-14 Score=117.42 Aligned_cols=95 Identities=19% Similarity=0.362 Sum_probs=83.5
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
...+|.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+....++.+..... .++|.|.+++.+|+|.|+
T Consensus 11 ~~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~ 86 (106)
T 1nct_A 11 TTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKY----KSTFEISSVQASDEGNYS 86 (106)
T ss_dssp SSCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSS----EEEEEECCCCSSCCSEEE
T ss_pred CCCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCC----EEEEEECcCCchhCEEEE
Confidence 4578999999999999999999999999999999999999999888777777665432 257999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEe
Q psy2775 89 VVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~ 107 (785)
|.|.|..|.....+.|.|.
T Consensus 87 C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 87 VVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp ECCBCSSCBCCEEEEEEEC
T ss_pred EEEEeCCCeEEEEEEEEEE
Confidence 9999999988888777774
No 462
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.48 E-value=1.3e-13 Score=112.27 Aligned_cols=89 Identities=17% Similarity=0.300 Sum_probs=78.0
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
...||.|...+..+.+.+|++++|.|.+.|.| +.+.|++++..+....++.+. + ..|.|.+++.+|+|.|+
T Consensus 6 ~~~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~--~------~~L~i~~~~~~D~G~Y~ 76 (95)
T 2ckn_A 6 QAQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT--G------EEVEVRDSIPADSGLYA 76 (95)
T ss_dssp SSCSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC--S------SEEEESSCCGGGSEEEE
T ss_pred CCCCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe--C------CEEEECCCChHHCEEEE
Confidence 35688999999999999999999999999987 799999999988877776554 1 25999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEE
Q psy2775 89 VVAKNREGEAKMDIPVKV 106 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v 106 (785)
|.|.|..|.....+.|.|
T Consensus 77 C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 77 CVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEeccCCCcEEEEEEEEE
Confidence 999999999888877776
No 463
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.48 E-value=5e-13 Score=122.28 Aligned_cols=163 Identities=12% Similarity=0.088 Sum_probs=112.3
Q ss_pred CeeeecCCceEecCCCeEEEEEEEEecCCC-eeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEE
Q psy2775 13 PTFSKKTKPVYAEENSEVTLEVRLVAVPEP-DLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVA 91 (785)
Q Consensus 13 p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 91 (785)
-.+...|....|.+|+++.|+|.+.. +.+ .+.|.-.-. .... ..+. ....+.|.+++ +|.+.|.|.+
T Consensus 3 f~v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~------~~~~-~~g~---~~~~~~ls~vs-~d~~~~~C~~ 70 (196)
T 3bn3_B 3 FWADLQPRVAFVERGGSLWLNCSTNC-PRPERGGLETSLR------RNGT-QRGL---RWLARQLVDIR-EPETQPVCFF 70 (196)
T ss_dssp SCEEEESSEEEEETTEEEEEEEEECC-SSCSEEEEECSSE------EEEE-EEET---TEEEEEEEEEC-SSEECCEEEE
T ss_pred cEEEEcCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEccC------CeeE-cccc---CceEEEEEEEc-cCCCceEEEE
Confidence 34566788899999999999999864 444 677753211 0111 1111 11348899999 8888899999
Q ss_pred EcCCeeEEEEeeEEEeCCCCCCCceecCCCceEeccCCcEEEEEEEecc-CCC--eEEEeECCEEcccceEEEeC-----
Q psy2775 92 KNREGEAKMDIPVKVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP--KVEWYKDGKLIKDRQITSEK----- 163 (785)
Q Consensus 92 ~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~--~v~W~~~g~~~~~~~~~~~~----- 163 (785)
..........+.|.|+. .|..+.|... ...+.+|+.++|+|.+.+. |.. +|+||++++.+.........
T Consensus 71 ~c~~~~~~~~v~l~Vy~-~P~~v~i~~~--~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~ 147 (196)
T 3bn3_B 71 RCARRTLQARGLIRTFQ-RPDRVELMPL--PPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARG 147 (196)
T ss_dssp EETTEEEEEECEEEEEB-CCCCCEECCC--CSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCC
T ss_pred ECCCCceEEEEEEEEec-CCCcCEEccC--CccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccc
Confidence 88777788888899885 2333444333 2347899999999999774 444 48999999998654321111
Q ss_pred CEEEEEEcccCCCCcEEEEEEEEcCCe
Q psy2775 164 NTHTLTLIQCSTKDKGRYSVKVTNKEG 190 (785)
Q Consensus 164 ~~~~L~i~~~~~~d~G~Y~C~a~n~~g 190 (785)
...++++...+.+|...|+|+|.+..+
T Consensus 148 ~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 148 AVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp EEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred eeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 235677777677777799999998765
No 464
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.47 E-value=4.8e-13 Score=111.85 Aligned_cols=98 Identities=11% Similarity=0.140 Sum_probs=76.6
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCC---CeeEEEECCEEcc---CCCCEEEeec--CCccceEEEEEEcccCC
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPE---PDLLWYYNGEPLQ---ETDEVVFSDQ--SDMHSYVSIVTIKSIKK 81 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~---~~i~W~~~~~~~~---~~~~~~~~~~--~~~~~~~~~L~i~~~~~ 81 (785)
+..|.|...|..+.+.+|++++|.|.+.|.|. +.|.|+|++.... ...++.+... .........|+|.+++.
T Consensus 2 ~p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 81 (108)
T 3cx2_A 2 DPIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQP 81 (108)
T ss_dssp CCCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCG
T ss_pred CCccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCC
Confidence 46799999999999999999999999999988 9999999873221 1234443321 11122346799999999
Q ss_pred CCCeEEEEEEEcCCeeEEEEeeEEEe
Q psy2775 82 REEGVYTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 82 ~D~G~Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
+|+|.|+|.|.|..|.....+.|.|.
T Consensus 82 ~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 82 AFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ccCEEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999999999999888875
No 465
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.47 E-value=7.3e-13 Score=108.39 Aligned_cols=90 Identities=20% Similarity=0.343 Sum_probs=78.9
Q ss_pred eeeecCCceEecCCCeEEEEEEEEec-CCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEEEE
Q psy2775 14 TFSKKTKPVYAEENSEVTLEVRLVAV-PEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVVAK 92 (785)
Q Consensus 14 ~~~~~~~~~~v~~G~~v~l~C~~~g~-p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 92 (785)
.+...|.++.+.+|++++|.|.+.|. |.+.+.|++++..+....++.+...++ ..+|.|.+++.+|+|.|+|.|.
T Consensus 3 ~v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~ 78 (97)
T 2bk8_A 3 MVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDG----VAILYVKDITKLDDGTYRCKVV 78 (97)
T ss_dssp CEECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETT----EEEEEECSCCGGGCEEEEEEEE
T ss_pred ceeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCC----eEEEEEecCChhhCeEEEEEEE
Confidence 45677889999999999999999997 889999999999998888877655433 2569999999999999999999
Q ss_pred cCCeeEEEEeeEEEe
Q psy2775 93 NREGEAKMDIPVKVN 107 (785)
Q Consensus 93 ~~~~~~~~~~~v~v~ 107 (785)
|..|.....+.|.|.
T Consensus 79 n~~g~~~~~~~l~V~ 93 (97)
T 2bk8_A 79 NDYGEDSSYAELFVK 93 (97)
T ss_dssp CSSCEEEEEEEEEET
T ss_pred CCCCeEeEEEEEEEE
Confidence 999999888888885
No 466
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=3.3e-13 Score=111.46 Aligned_cols=89 Identities=20% Similarity=0.323 Sum_probs=76.6
Q ss_pred CCCCeEeeeeee-eeeeecCeEEEEEEEecCCCCceEEEeCCEEecCC-CCeeEEeeCCeEEEEEccCCCCCCceeEEEE
Q psy2775 556 GQAPLFIERFEE-KTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSS-PKKREIFDGENIILELKEADSETDAGDYKVV 633 (785)
Q Consensus 556 ~~~p~~~~~~~~-~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~-~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~ 633 (785)
..+|.|+..+.+ ..+.+|++++|.|.+ +.|.|.|.|+|+|..+..+ .++.+..++...+|.|.++.. +|+|.|+|.
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~ 90 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSL-ADDAAYQCV 90 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSS-SSCEEEEEE
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCc-ccCEEEEEE
Confidence 456888888877 889999999999999 7999999999999999877 677777778888999999999 999999999
Q ss_pred EEcCCcceEEEEEEEEE
Q psy2775 634 ATNELGSATHGARVTVD 650 (785)
Q Consensus 634 a~n~~g~~~~~~~l~V~ 650 (785)
| |....++.|.|+
T Consensus 91 a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 91 V----GGEKCSTELFVK 103 (104)
T ss_dssp E----TTEEECCEEEEE
T ss_pred E----CCCcEEEEEEEe
Confidence 9 445666777774
No 467
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=5.8e-14 Score=115.96 Aligned_cols=89 Identities=20% Similarity=0.371 Sum_probs=77.1
Q ss_pred CCCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCC----CeeEEeeCCeEEEEEccCCCCCCceeEE
Q psy2775 556 GQAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSP----KKREIFDGENIILELKEADSETDAGDYK 631 (785)
Q Consensus 556 ~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~----~~~~~~~~~~~~L~i~~~~~~~d~G~Y~ 631 (785)
..+|.|...+.+..+.+|++++|.|.+.|.| |.+.|+|+|..+..+. ++.+..++...+|.|.++.. +|+|.|+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~ 83 (101)
T 2edk_A 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQ-EDRGRYQ 83 (101)
T ss_dssp CCCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCG-GGCSBEE
T ss_pred cCCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCCh-hhCEEEE
Confidence 3468888888999999999999999999999 9999999999997776 55777777788999999999 9999999
Q ss_pred EEEEcCCcceEEEEEEEEE
Q psy2775 632 VVATNELGSATHGARVTVD 650 (785)
Q Consensus 632 C~a~n~~g~~~~~~~l~V~ 650 (785)
|.|.| ...++.|.|.
T Consensus 84 C~a~n----~~~~~~l~V~ 98 (101)
T 2edk_A 84 VITNG----GQCEAELIVE 98 (101)
T ss_dssp EECSS----CEECCBEEEE
T ss_pred EEEcC----CcEEEEEEEe
Confidence 99988 3455677775
No 468
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.46 E-value=2.4e-13 Score=114.94 Aligned_cols=85 Identities=21% Similarity=0.363 Sum_probs=75.4
Q ss_pred CeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCC
Q psy2775 559 PLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNEL 638 (785)
Q Consensus 559 p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~ 638 (785)
|.|...+.+..+.+|++++|.|.+.|. |.+.|+|++..+..+.++.+..++....|.|.++.. +|+|.|+|.|
T Consensus 20 p~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a---- 92 (113)
T 2edh_A 20 IKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVA-EDAGEYLCMC---- 92 (113)
T ss_dssp CCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCS-TTCEEEEEEE----
T ss_pred CcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCCh-hhCEEEEEEe----
Confidence 567777778899999999999999875 689999999999888888888888888999999999 9999999999
Q ss_pred cceEEEEEEEEE
Q psy2775 639 GSATHGARVTVD 650 (785)
Q Consensus 639 g~~~~~~~l~V~ 650 (785)
|....++.|.|.
T Consensus 93 ~~~~~~~~l~V~ 104 (113)
T 2edh_A 93 GKERTSAMLTVR 104 (113)
T ss_dssp TTEEEEEEEEEC
T ss_pred CCCCEEEEEEEe
Confidence 777888888886
No 469
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.46 E-value=6.7e-13 Score=109.61 Aligned_cols=95 Identities=21% Similarity=0.412 Sum_probs=75.4
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEe-ecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFS-DQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
..||+|..-.. ...|+.+.|.|.+.|.|.|.++|++++..+..+.+.... ...+.....++|.|.+++.+|+|.|+
T Consensus 2 ~~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 78 (103)
T 1wwb_X 2 HFAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYT 78 (103)
T ss_dssp CCCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEE
T ss_pred CCCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEE
Confidence 46788754322 356899999999999999999999999999877654222 11122334567999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEe
Q psy2775 89 VVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~ 107 (785)
|.|.|..|.....+.|.|.
T Consensus 79 C~A~N~~G~~~~~~~l~V~ 97 (103)
T 1wwb_X 79 LIAKNEYGKDEKQISAHFM 97 (103)
T ss_dssp EEEECSSCEEEEEEEECCS
T ss_pred EEEEeCCCcEeEEEEEEEC
Confidence 9999999999998888886
No 470
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.46 E-value=7.2e-14 Score=117.20 Aligned_cols=91 Identities=24% Similarity=0.399 Sum_probs=71.2
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
+|.|...+.+..+.+|+.++|.|.+.|.|.|.+.|+|++..+....+... .....+|.|.++.. +|+|.|+|.|.|.
T Consensus 10 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~--~~~~~~L~i~~v~~-~D~G~Y~C~a~n~ 86 (108)
T 3kvq_A 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVL--KDGNRNLTIRRVRK-EDEGLYTCQACSV 86 (108)
T ss_dssp -CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEE--ETTTTEEEECSCCG-GGCEEEEEEEC--
T ss_pred CCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEE--eCCCcEEEEeecCc-ccCEEEEEEEEeC
Confidence 58888888899999999999999999999999999999998876655433 34456799999999 9999999999999
Q ss_pred CcceEEEEEEEEEe
Q psy2775 638 LGSATHGARVTVDV 651 (785)
Q Consensus 638 ~g~~~~~~~l~V~~ 651 (785)
.|....++.|.|..
T Consensus 87 ~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 87 LGCAKVEAFFIIEG 100 (108)
T ss_dssp --CEEEEEEEEEEC
T ss_pred CCceEEEEEEEEeC
Confidence 99999999888873
No 471
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=2.3e-13 Score=112.16 Aligned_cols=91 Identities=20% Similarity=0.347 Sum_probs=77.7
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccC-CCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQE-TDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
..||.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+.. ..++.+... .+|.|.+++.+|+|.|+
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-------~~L~i~~v~~~d~G~Y~ 78 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQ-------GTLQIKNLRISDTGTYT 78 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECTT-------CCEEEESCCTTTCCEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcCC-------CEEEEccCCcccCEEEE
Confidence 4689999999999999999999999999999999999999988764 333333222 24999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEe
Q psy2775 89 VVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~ 107 (785)
|.|.|..|.....+.|.|.
T Consensus 79 C~a~n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 79 CVATSSSGETSWSAVLDVT 97 (100)
T ss_dssp EEEECSSCCCBCCEEEEEE
T ss_pred EEEEcCCCCEEEEEEEEEe
Confidence 9999999988888888886
No 472
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.46 E-value=2.2e-12 Score=117.11 Aligned_cols=156 Identities=15% Similarity=0.144 Sum_probs=107.1
Q ss_pred CCceEeccCCcEEEEEEEeccCCC-eEEEeECCEEcccceE-EEeCCEEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEE
Q psy2775 120 LHDVSITEGESAVLSVQVGGEPSP-KVEWYKDGKLIKDRQI-TSEKNTHTLTLIQCSTKDKGRYSVKVTNKEGTVESAAN 197 (785)
Q Consensus 120 ~~~~~~~~G~~v~l~C~~~g~p~~-~v~W~~~g~~~~~~~~-~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 197 (785)
+....+.+|+++.|+|.+.. +.+ .+.|.-. +..... ....+...|.|.+++. | |.|.|.+.......+..+.
T Consensus 6 P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~---l~~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~ 79 (185)
T 1iam_A 6 PSKVILPRGGSVLVTCSTSC-DQPKLLGIETP---LPKKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAKTF 79 (185)
T ss_dssp SSEEEEETTEEEEEEEEECS-SSCSEEEEECS---SCEEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCEEEEECE
T ss_pred CCCcEEeCCCCEEEEEEccC-CCCccceEEee---CCCccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCceEEEEE
Confidence 34567899999999999964 444 4777531 111111 1123346799999984 4 9999999776566777788
Q ss_pred EEeecCCCCCCCCCCCCCCCccccccceeeecCCCCCCCeeeecCCcceeCCCCeEEEEEEEcc-CCCC--eEEEEECCE
Q psy2775 198 LNVDPYEPKESKETPPSPPPYVVSELDTLQVNTGKPEKPSILEPLHDVSITEGESAVLSVQVGG-EPSP--KVEWYKDGK 274 (785)
Q Consensus 198 l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~G~~~~l~C~~~g-~p~~--~v~W~~~~~ 274 (785)
|.|...| ..+...+....+.+|+.++|.|.+.| .|.+ .|+|+++++
T Consensus 80 l~V~~~P-------------------------------~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~ 128 (185)
T 1iam_A 80 LTVYWTP-------------------------------ERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEK 128 (185)
T ss_dssp EEEEBCC-------------------------------SEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTE
T ss_pred EEEeCCC-------------------------------CCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCE
Confidence 8887543 12223333445889999999999977 4554 589999999
Q ss_pred EcccceEEEeCCEEEEEEccCCCCCCeEEEEEEEeCCC
Q psy2775 275 LIKDRQITSEKNTHTLTLIQCSTKDKGRYSVKVTNKEG 312 (785)
Q Consensus 275 ~l~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g 312 (785)
.+.......+..+.+|++.....+|...|+|+|.|..+
T Consensus 129 ~l~~~~~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 129 ELKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp EEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred EcccccCCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 88633211223345788887777777799999998765
No 473
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=6.3e-13 Score=113.29 Aligned_cols=93 Identities=17% Similarity=0.350 Sum_probs=78.2
Q ss_pred CCCCeeee---cCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 10 GIPPTFSK---KTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 10 ~~~p~~~~---~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
..||.|.. .+..+.+.+|+++.|.|.+.|.|.+.+.|++++..+. ..++.+...++ .++|+|.+++.+|+|.
T Consensus 19 ~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~----~~~L~i~~~~~~D~G~ 93 (118)
T 2e7c_A 19 AEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDF----DTVFFVRQAARSDSGE 93 (118)
T ss_dssp SEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSS----EEEEEESSCCTTTCEE
T ss_pred ccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCC----eEEEEECCCChhcCEE
Confidence 34788864 3678999999999999999999999999999999986 44555543332 2569999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEe
Q psy2775 87 YTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
|+|.|.|..|.....+.|.|.
T Consensus 94 Y~C~a~N~~G~~~~~~~l~V~ 114 (118)
T 2e7c_A 94 YELSVQIENMKDTATIRIRVV 114 (118)
T ss_dssp EEEEEECSSCEECCEEEEEEE
T ss_pred EEEEEEeCCCeEEEEEEEEEE
Confidence 999999999988888888886
No 474
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.45 E-value=1.5e-13 Score=115.29 Aligned_cols=96 Identities=24% Similarity=0.455 Sum_probs=72.3
Q ss_pred cccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeE
Q psy2775 7 ILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 7 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 86 (785)
+....||.|...+..+.+.+|++++|.|.+.|.|.+.+.|++++..+....+..+.... ++|.|.+++.+|+|.
T Consensus 5 v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~------~~L~i~~v~~~D~G~ 78 (108)
T 3kvq_A 5 VLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGN------RNLTIRRVRKEDEGL 78 (108)
T ss_dssp ------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEETTT------TEEEECSCCGGGCEE
T ss_pred ECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEeCCC------cEEEEeecCcccCEE
Confidence 44567999999999999999999999999999999999999999988777666554333 349999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEeC
Q psy2775 87 YTVVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~~ 108 (785)
|+|.|.|..|.....+.|.|..
T Consensus 79 Y~C~a~n~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 79 YTCQACSVLGCAKVEAFFIIEG 100 (108)
T ss_dssp EEEEEC----CEEEEEEEEEEC
T ss_pred EEEEEEeCCCceEEEEEEEEeC
Confidence 9999999999998888888873
No 475
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=8.5e-13 Score=109.14 Aligned_cols=88 Identities=17% Similarity=0.203 Sum_probs=75.8
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCC----------CeeEEeeCCeEEEEEccCCCCCC
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSP----------KKREIFDGENIILELKEADSETD 626 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~----------~~~~~~~~~~~~L~i~~~~~~~d 626 (785)
.+|.|...+++..+.+|++++|.|.+.+ .|.+.|||||++|..+. ++.+..++..++|+|.++.. +|
T Consensus 7 p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~-~D 83 (112)
T 2e6q_A 7 GTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKH-QD 83 (112)
T ss_dssp SCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCS-TT
T ss_pred CCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCH-HH
Confidence 3588999999999999999999999998 77899999999998876 66666677788999999999 99
Q ss_pred ceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 627 AGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 627 ~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
+|.|+|...+ ....++.|.|+
T Consensus 84 ~G~Y~~~~~~---~~~ssA~L~V~ 104 (112)
T 2e6q_A 84 SGALVGFSCP---GVQDSAALTIQ 104 (112)
T ss_dssp CSEEEEEEET---TEEEEEEEEEE
T ss_pred CccEEEEEEC---CeeEEEEEEEe
Confidence 9999774443 45678899987
No 476
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.45 E-value=9.1e-13 Score=127.15 Aligned_cols=171 Identities=16% Similarity=0.192 Sum_probs=109.2
Q ss_pred CeEEecCCcEEEEEEEeCC---CceEEEEECC--E---Ec--------------ccCCCEEEEEeC--cEEEEEEccCCC
Q psy2775 424 DVKVSRDEKASFEIELTKG---DALVKWYKDG--K---EI--------------AFSENVTLSIDG--KKQKLIIFSAGL 479 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~---~~--------------~~~~~~~~~~~~--~~~~L~i~~~~~ 479 (785)
.+.+.+|++++|.|.+.+. ...+.|++.. . .+ ...+++.+..+. ....|+|.+++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (226)
T 3mlr_H 9 GEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQA 88 (226)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCG
T ss_pred CEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCc
Confidence 5678899999999999762 4579999832 1 11 012455555443 467899999999
Q ss_pred CCcEEEEEEEeecC-c---------ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccc
Q psy2775 480 EDAGEYSCRVGDTG-D---------KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPT 549 (785)
Q Consensus 480 ~d~G~Y~C~a~n~g-~---------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 549 (785)
+|+|.|.|.+.+.+ . -.....|.|...+
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~------------------------------------------ 126 (226)
T 3mlr_H 89 SDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGT------------------------------------------ 126 (226)
T ss_dssp GGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCC------------------------------------------
T ss_pred ccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCC------------------------------------------
Confidence 99999999998742 0 0112345554321
Q ss_pred cCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-C-CCceEEEeCCEEecCCCCe--eEEeeCC----eEEEEEccC
Q psy2775 550 CPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-P-APSIVWFRNNKPLLSSPKK--REIFDGE----NIILELKEA 621 (785)
Q Consensus 550 ~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P-~p~v~W~~~~~~i~~~~~~--~~~~~~~----~~~L~i~~~ 621 (785)
..+|.+........+.+|+.++|.|.+.|. | .+.+.| ++..+..+... .....++ .+.|.|...
T Consensus 127 ------~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~ 198 (226)
T 3mlr_H 127 ------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSS 198 (226)
T ss_dssp ------CBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGG
T ss_pred ------CCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHh
Confidence 112444433334456689999999999985 5 347999 44333221100 0111112 246889988
Q ss_pred CCCCCceeEEEEEEcCCcceEEEEE
Q psy2775 622 DSETDAGDYKVVATNELGSATHGAR 646 (785)
Q Consensus 622 ~~~~d~G~Y~C~a~n~~g~~~~~~~ 646 (785)
.. +| |.|+|.|.|..+.......
T Consensus 199 ~~-~~-~~ytC~v~h~~~~~~~~~~ 221 (226)
T 3mlr_H 199 SL-GT-QTYICNVNHKPSNTKVDKK 221 (226)
T ss_dssp GT-TT-CCCEEEEEEGGGTEEEEEE
T ss_pred Hc-CC-CeEEEEEEECCCCcCeEEE
Confidence 87 78 9999999999887655443
No 477
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.45 E-value=3.8e-13 Score=132.79 Aligned_cols=172 Identities=17% Similarity=0.221 Sum_probs=105.7
Q ss_pred CeEEecCCcEEEEEEEeCC---CceEEEEECC--EE---c-------------ccCCCEEEEEeC--cEEEEEEccCCCC
Q psy2775 424 DVKVSRDEKASFEIELTKG---DALVKWYKDG--KE---I-------------AFSENVTLSIDG--KKQKLIIFSAGLE 480 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~~---~-------------~~~~~~~~~~~~--~~~~L~i~~~~~~ 480 (785)
.+.+.+|++++|.|.+.+. ...+.|++.. .. + ...+++.+..+. ....|+|.+++.+
T Consensus 9 ~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 9 PGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred CEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 4678899999999999862 4579999732 11 1 112456655443 4678999999999
Q ss_pred CcEEEEEEEeecCc---------ceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccccccC
Q psy2775 481 DAGEYSCRVGDTGD---------KESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIVPTCP 551 (785)
Q Consensus 481 d~G~Y~C~a~n~g~---------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~ 551 (785)
|+|.|.|.+.+.+. ......|.|...+.
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~------------------------------------------- 125 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAST------------------------------------------- 125 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCC-------------------------------------------
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEecccC-------------------------------------------
Confidence 99999999987521 11224555543210
Q ss_pred CCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CC-CceEEEeCCEEecCCCCe--eEEeeCC----eEEEEEccCCC
Q psy2775 552 LGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PA-PSIVWFRNNKPLLSSPKK--REIFDGE----NIILELKEADS 623 (785)
Q Consensus 552 ~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~-p~v~W~~~~~~i~~~~~~--~~~~~~~----~~~L~i~~~~~ 623 (785)
.+|.+........+.+|+.++|.|.+.|. |. +.|+| ++..+...... .....++ .+.|.|.....
T Consensus 126 -----~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 198 (263)
T 3iu4_H 126 -----KGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL 198 (263)
T ss_dssp -----BCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHH
T ss_pred -----CCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHc
Confidence 11444322223345689999999999986 53 57999 44433221100 0111112 24688888876
Q ss_pred CCCceeEEEEEEcCCcceEEEEEE
Q psy2775 624 ETDAGDYKVVATNELGSATHGARV 647 (785)
Q Consensus 624 ~~d~G~Y~C~a~n~~g~~~~~~~l 647 (785)
+| |.|+|.|.|..+.......+
T Consensus 199 -~~-~~ytC~v~h~~~~~~~~~~~ 220 (263)
T 3iu4_H 199 -GT-QTYICNVNHKPSNTKVDKKV 220 (263)
T ss_dssp -HH-CCCEEEEEEGGGTEEEEEEC
T ss_pred -CC-CEEEEEEEECCCCcceeEEE
Confidence 78 99999999998865544443
No 478
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=2e-13 Score=115.64 Aligned_cols=98 Identities=16% Similarity=0.347 Sum_probs=78.4
Q ss_pred CcccccccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeec-CCccceEEEEEEcccC
Q psy2775 2 SSLADILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQ-SDMHSYVSIVTIKSIK 80 (785)
Q Consensus 2 ~s~~~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~i~~~~ 80 (785)
|+....+.+.|+.|...+.++.+.+|++++|.|.+.|.|.+.+.|++++..+..+.++.+... ++. .+|+|.+++
T Consensus 3 s~a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~----~~L~I~~v~ 78 (115)
T 2cr6_A 3 SGSSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGY----HVLTLRQLA 78 (115)
T ss_dssp CCCCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTB----CCBEECSCC
T ss_pred ccEEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCE----EEEEEcCCC
Confidence 344445555566899999999999999999999999999999999999999887776655422 222 349999999
Q ss_pred CCCCeEEEEEEEcCCeeEEEEeeEEEe
Q psy2775 81 KREEGVYTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 81 ~~D~G~Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
.+|+|.|+|.+ |.....+.|.|.
T Consensus 79 ~~D~G~Y~C~~----g~~~~~~~L~V~ 101 (115)
T 2cr6_A 79 LKDSGTIYFEA----GDQRASAALRVT 101 (115)
T ss_dssp TTTCEEEEEEE----TTEECCEEEEEE
T ss_pred hhhCEEEEEEE----CCeeEEEEEEEE
Confidence 99999999994 445566778887
No 479
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.44 E-value=5e-13 Score=132.53 Aligned_cols=178 Identities=13% Similarity=0.241 Sum_probs=113.1
Q ss_pred cCCceEecCCCeEEEEEEEEe--cCCCeeEEEECC--E---Ec---cC-----------CCCEEEeecCCccceEEEEEE
Q psy2775 18 KTKPVYAEENSEVTLEVRLVA--VPEPDLLWYYNG--E---PL---QE-----------TDEVVFSDQSDMHSYVSIVTI 76 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g--~p~~~i~W~~~~--~---~~---~~-----------~~~~~~~~~~~~~~~~~~L~i 76 (785)
.+..+.+.+|++|+|.|.+.+ .....+.||+.. . .+ .. ..|+.+..+.. ....+|+|
T Consensus 29 q~~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~--~~~~sL~I 106 (267)
T 3u1s_H 29 QSGAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSG--ASTVYMEL 106 (267)
T ss_dssp ECCCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGG--GCCEEEEE
T ss_pred eeCCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCC--CCEEEEEE
Confidence 344688999999999999965 244689999842 1 11 00 13444433322 12356999
Q ss_pred cccCCCCCeEEEEEEEcC------Ce------------e-------EEEEeeEEEeCCCCCCCceecCCCceEeccCCcE
Q psy2775 77 KSIKKREEGVYTVVAKNR------EG------------E-------AKMDIPVKVNTGKPEKPSILEPLHDVSITEGESA 131 (785)
Q Consensus 77 ~~~~~~D~G~Y~C~a~~~------~~------------~-------~~~~~~v~v~~~~~~~p~i~~~~~~~~~~~G~~v 131 (785)
.+++.+|+|.|.|.+.+. .+ . -.....|.|....+.+|.+...........|+.+
T Consensus 107 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~ 186 (267)
T 3u1s_H 107 RGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTA 186 (267)
T ss_dssp CSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETTEE
T ss_pred CCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCCcE
Confidence 999999999999999621 11 1 1113456675445566776632233334579999
Q ss_pred EEEEEEec-cC-CCeEEEeECCEEcccce-----EEEeCC----EEEEEEcccCCCCcEEEEEEEEcCCeeEEEEEEEEe
Q psy2775 132 VLSVQVGG-EP-SPKVEWYKDGKLIKDRQ-----ITSEKN----THTLTLIQCSTKDKGRYSVKVTNKEGTVESAANLNV 200 (785)
Q Consensus 132 ~l~C~~~g-~p-~~~v~W~~~g~~~~~~~-----~~~~~~----~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V 200 (785)
.|.|.+.+ .| ++.++| +|..+.... ....++ .+.|.|.....+| |.|+|.+.|..+.......+.+
T Consensus 187 ~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 263 (267)
T 3u1s_H 187 ALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 263 (267)
T ss_dssp EEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEccc
Confidence 99999987 45 458999 665543221 111111 2468888888888 9999999998765554444433
No 480
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=2.8e-13 Score=114.83 Aligned_cols=89 Identities=20% Similarity=0.325 Sum_probs=77.3
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEE-eeCCeEEEEEccCCCCCCceeEEEEEE
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREI-FDGENIILELKEADSETDAGDYKVVAT 635 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~-~~~~~~~L~i~~~~~~~d~G~Y~C~a~ 635 (785)
.++.|...+.+..+.+|++++|.|.+.|.|.|.+.|+|+|..+..+.++.+. .++...+|.|.++.. +|+|.|+|.+
T Consensus 12 ~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~~- 89 (115)
T 2cr6_A 12 RRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLAL-KDSGTIYFEA- 89 (115)
T ss_dssp SCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCT-TTCEEEEEEE-
T ss_pred CCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCCh-hhCEEEEEEE-
Confidence 3468888889999999999999999999999999999999999887776555 336667899999999 9999999994
Q ss_pred cCCcceEEEEEEEEE
Q psy2775 636 NELGSATHGARVTVD 650 (785)
Q Consensus 636 n~~g~~~~~~~l~V~ 650 (785)
|....++.|.|.
T Consensus 90 ---g~~~~~~~L~V~ 101 (115)
T 2cr6_A 90 ---GDQRASAALRVT 101 (115)
T ss_dssp ---TTEECCEEEEEE
T ss_pred ---CCeeEEEEEEEE
Confidence 777788888887
No 481
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.43 E-value=7.5e-13 Score=130.58 Aligned_cols=175 Identities=16% Similarity=0.216 Sum_probs=110.2
Q ss_pred CeEEecCCcEEEEEEEeCC---CceEEEEECC--EE---c--------------ccCCCEEEEEeC--cEEEEEEccCCC
Q psy2775 424 DVKVSRDEKASFEIELTKG---DALVKWYKDG--KE---I--------------AFSENVTLSIDG--KKQKLIIFSAGL 479 (785)
Q Consensus 424 ~~~v~~g~~~~l~C~~~~~---~~~i~W~~~~--~~---~--------------~~~~~~~~~~~~--~~~~L~i~~~~~ 479 (785)
...+.+|++++|.|.+.+. ...+.|++.. .. + ...+++.+..+. ....|+|.+++.
T Consensus 32 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 111 (256)
T 3sob_H 32 GGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRA 111 (256)
T ss_dssp CCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred cEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCc
Confidence 4568899999999999762 4579999732 11 1 012456655443 467799999999
Q ss_pred CCcEEEEEEEeecC------------cceeEEEEEEEcCcccccccCCCeeEEeccCceeEEEEecCCceeeEEeecccc
Q psy2775 480 EDAGEYSCRVGDTG------------DKESKATLTVEAPAVEFLTKLPSVTLVPHLGDATFQVELSSPDIQVKWLNLFIV 547 (785)
Q Consensus 480 ~d~G~Y~C~a~n~g------------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 547 (785)
+|+|.|.|.+.+.+ .......|.|...+.
T Consensus 112 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------------- 152 (256)
T 3sob_H 112 EDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSAST--------------------------------------- 152 (256)
T ss_dssp GGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCC---------------------------------------
T ss_pred ccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCC---------------------------------------
Confidence 99999999998742 112234566653210
Q ss_pred cccCCCCCCCCCeEeeeeeeeeeeecCeEEEEEEEecC-CC-CceEEEeCCEEecCCCCe--eEEeeCC----eEEEEEc
Q psy2775 548 PTCPLGSPGQAPLFIERFEEKTVKEKGTIRLMAKVKAS-PA-PSIVWFRNNKPLLSSPKK--REIFDGE----NIILELK 619 (785)
Q Consensus 548 ~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~l~C~~~g~-P~-p~v~W~~~~~~i~~~~~~--~~~~~~~----~~~L~i~ 619 (785)
.+|.+........+.+|+.++|.|.+.|. |. +.+.| ++..+..+... .....++ .+.|.|.
T Consensus 153 ---------~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~ 221 (256)
T 3sob_H 153 ---------KGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVP 221 (256)
T ss_dssp ---------BCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEE
T ss_pred ---------CCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEEC
Confidence 11444322223356789999999999984 53 47999 55444321110 0111112 2468899
Q ss_pred cCCCCCCceeEEEEEEcCCcceEEEEEEEEE
Q psy2775 620 EADSETDAGDYKVVATNELGSATHGARVTVD 650 (785)
Q Consensus 620 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 650 (785)
.... +| |.|+|.|.|..+.......|.+.
T Consensus 222 ~~~~-~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 222 SSSL-GT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp GGGT-TT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred HHHc-CC-ceEEEEEEeCCCCcceEEEeccc
Confidence 8887 88 99999999999887776666554
No 482
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.43 E-value=5e-13 Score=107.78 Aligned_cols=83 Identities=19% Similarity=0.286 Sum_probs=70.2
Q ss_pred CCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcC
Q psy2775 558 APLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNE 637 (785)
Q Consensus 558 ~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~ 637 (785)
++.|...+....+.+|+.++|.|.+.|+|.|.+.|+|++..+.... ...|.|.++.. +|+|.|+|.|.|.
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~---------~~~L~i~~v~~-~d~G~Y~C~a~n~ 72 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET---------KKLYMVPYVDL-EHQGTYWCHVYND 72 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC---------SSEEEESSCCG-GGCEEEEEEEECS
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC---------CCeEEECCCCH-HhCEEEEEEEEcC
Confidence 3677777888899999999999999999999999999999886543 24799999999 9999999999999
Q ss_pred CcceE-EEEEEEEE
Q psy2775 638 LGSAT-HGARVTVD 650 (785)
Q Consensus 638 ~g~~~-~~~~l~V~ 650 (785)
.|... ..+.|.|.
T Consensus 73 ~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 73 RDSQDSKKVEIIID 86 (91)
T ss_dssp SCEEECCCEEEEEC
T ss_pred CCCEEeeeEEEEEe
Confidence 99755 33555554
No 483
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.43 E-value=1.4e-12 Score=109.54 Aligned_cols=94 Identities=21% Similarity=0.295 Sum_probs=74.6
Q ss_pred CCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecC---CccceEEEEEEcccCCCCCeE
Q psy2775 10 GIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQS---DMHSYVSIVTIKSIKKREEGV 86 (785)
Q Consensus 10 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~i~~~~~~D~G~ 86 (785)
..||+|.. .. ...+..+.|.|.+.|.|.|.|+|+|||..|..+.+....... +.....++|.|.+++.+|+|.
T Consensus 2 ~~pP~I~l-~~---~~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 77 (126)
T 1he7_A 2 HMPASVQL-HT---AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGN 77 (126)
T ss_dssp CCCCCCCC-CC---CCCCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEE
T ss_pred CCCCEEEc-cC---CccCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEE
Confidence 35788722 22 347889999999999999999999999999888776443222 112234679999999999999
Q ss_pred EEEEEEcCCeeEEEEeeEEEe
Q psy2775 87 YTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 87 Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
|+|.|.|..|.+..++.|.|.
T Consensus 78 YtC~A~N~~G~~~~t~~l~v~ 98 (126)
T 1he7_A 78 YTLLAANPFGQASASIMAAFM 98 (126)
T ss_dssp EEEEEEETTEEEEEEEEECCC
T ss_pred EEEEEEECCCeEEEEEEEEEE
Confidence 999999999999888888776
No 484
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.43 E-value=1.4e-12 Score=110.18 Aligned_cols=95 Identities=17% Similarity=0.325 Sum_probs=78.4
Q ss_pred cccccccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCC
Q psy2775 3 SLADILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKR 82 (785)
Q Consensus 3 s~~~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 82 (785)
+....+.+.||.|...+..+.+.+|++++|.|.+.+. +.+.|++++..+..+.++.+..++.. ..|+|.+++.+
T Consensus 10 ~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~----~~L~I~~v~~~ 83 (113)
T 2edh_A 10 SAMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGAR----CELQIRGLVAE 83 (113)
T ss_dssp CCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTE----EEEEECSCCST
T ss_pred EEEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCE----EEEEECCCChh
Confidence 3444555678899999999999999999999999764 67999999999988888877765532 46999999999
Q ss_pred CCeEEEEEEEcCCeeEEEEeeEEEe
Q psy2775 83 EEGVYTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 83 D~G~Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
|+|.|+|.| +.....+.|.|.
T Consensus 84 D~G~Y~C~a----~~~~~~~~l~V~ 104 (113)
T 2edh_A 84 DAGEYLCMC----GKERTSAMLTVR 104 (113)
T ss_dssp TCEEEEEEE----TTEEEEEEEEEC
T ss_pred hCEEEEEEe----CCCCEEEEEEEe
Confidence 999999999 445666777776
No 485
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=2.7e-13 Score=112.20 Aligned_cols=94 Identities=12% Similarity=0.151 Sum_probs=78.7
Q ss_pred cccCCCCeeeecCCceEecCCCeEEEEEEEEecCC-CeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCe
Q psy2775 7 ILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPE-PDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEG 85 (785)
Q Consensus 7 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~-~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G 85 (785)
.+.+.||.|...+.++.+.+|++++|.|.+.+.|. +.+.|++++..+..+.++.+..++.. .+|+|.+++.+|+|
T Consensus 3 ~V~~~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~----~~L~I~~v~~~D~G 78 (104)
T 2eny_A 3 SGSSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRK----YILVVREAAPSDAG 78 (104)
T ss_dssp CCCCCCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTE----EEEEECSCCTTTCS
T ss_pred ccccCCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCE----EEEEECCCCHHHCE
Confidence 46678899999999999999999999999988764 47999999999988888777665543 46999999999999
Q ss_pred EEEEEEEcCCeeEEEEeeEEEeC
Q psy2775 86 VYTVVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 86 ~Y~C~a~~~~~~~~~~~~v~v~~ 108 (785)
.|+|.|.| ....+.|.|..
T Consensus 79 ~Y~C~a~~----~~~~a~L~V~~ 97 (104)
T 2eny_A 79 EVVFSVRG----LTSKASLIVRE 97 (104)
T ss_dssp CEEEEETT----EEEEECEEEEC
T ss_pred EEEEEECC----eeEEEEEEEeC
Confidence 99999865 34667777763
No 486
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.41 E-value=1.3e-12 Score=108.23 Aligned_cols=89 Identities=17% Similarity=0.269 Sum_probs=73.1
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCC--CEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETD--EVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
.|+.|...+.++.+.+|++++|.|.+.+ |.+.+.|++++..+.... ++.+..++. ..+|+|.+++.+|+|.|+
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~ 80 (103)
T 1x44_A 6 SGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGK----KHILIIEGATKADAAEYS 80 (103)
T ss_dssp SSCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETT----EEEEEEEEECTTTCSEEE
T ss_pred CCceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCC----EEEEEECCCCcccCEEEE
Confidence 4555899999999999999999999977 778999999999998777 556665443 256999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEeC
Q psy2775 89 VVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~~ 108 (785)
|.|.| ....+.|.|..
T Consensus 81 C~a~n----~~~~~~l~V~~ 96 (103)
T 1x44_A 81 VMTTG----GQSSAKLSVDL 96 (103)
T ss_dssp EEETT----EEEEEEEEEEC
T ss_pred EEECC----CcEEEEEEEeC
Confidence 99987 35556677763
No 487
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=7.4e-13 Score=109.77 Aligned_cols=91 Identities=13% Similarity=0.268 Sum_probs=77.7
Q ss_pred ccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEE
Q psy2775 8 LEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVY 87 (785)
Q Consensus 8 ~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 87 (785)
-.+.||.|...+..+.+.+|++++|.|.+.+ |.+.+.|++++..+....++.+..++. ...|+|.+++.+|+|.|
T Consensus 4 ~~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y 78 (103)
T 2edf_A 4 GSSGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGT----MAMLVIRGASLKDAGEY 78 (103)
T ss_dssp SCCCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETT----EEEEEESSCCTTTCSEE
T ss_pred CCCCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCC----EEEEEECCCCcccCEEE
Confidence 3568999999999999999999999999987 778899999999998888877766544 25699999999999999
Q ss_pred EEEEEcCCeeEEEEeeEEEe
Q psy2775 88 TVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 88 ~C~a~~~~~~~~~~~~v~v~ 107 (785)
+|.|.|. ...+.|.|.
T Consensus 79 ~C~a~n~----~~~~~l~V~ 94 (103)
T 2edf_A 79 TCEVEAS----KSTASLHVE 94 (103)
T ss_dssp EEECSSC----EEEEEEEEC
T ss_pred EEEEccC----CcEEEEEEe
Confidence 9999992 455667775
No 488
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.41 E-value=7.8e-13 Score=109.61 Aligned_cols=88 Identities=25% Similarity=0.364 Sum_probs=79.0
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+|.|...+.+..+.+|++++|.|.+.|.|.| +.|+|++..+..+.++.+..++...+|.|.+++. +|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~--- 81 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRP-QDSGRYSCS--- 81 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCT-TTCCCEEEE---
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCc-ccCEEEEEE---
Confidence 46888888889999999999999999999999 9999999999878888888888888999999999 999999998
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
.|....++.|.|.
T Consensus 82 -~g~~~~~~~l~V~ 94 (103)
T 2e7b_A 82 -FGDQTTSATLTVT 94 (103)
T ss_dssp -CSSCBCCBCEEEE
T ss_pred -ECCcEEEEEEEEE
Confidence 5667777888886
No 489
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.40 E-value=7.5e-13 Score=109.09 Aligned_cols=91 Identities=18% Similarity=0.313 Sum_probs=74.3
Q ss_pred CCCCeeeecC----CceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCC---EEEeecCCccceEEEEEEcccCCC
Q psy2775 10 GIPPTFSKKT----KPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDE---VVFSDQSDMHSYVSIVTIKSIKKR 82 (785)
Q Consensus 10 ~~~p~~~~~~----~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~i~~~~~~ 82 (785)
+.||.|...| ..+.+.+|++++|.|.+.|.|.+.+.|++++..+....+ ....... ++|+|.+++.+
T Consensus 2 ~~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~------~~L~i~~v~~~ 75 (100)
T 3caf_A 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH------WSLIMESVVPS 75 (100)
T ss_dssp CEEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGG------TEEEECSCCGG
T ss_pred CCCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCe------EEEEEccCCcC
Confidence 4578888654 578899999999999999999999999999998865433 2222111 35999999999
Q ss_pred CCeEEEEEEEcCCeeEEEEeeEEE
Q psy2775 83 EEGVYTVVAKNREGEAKMDIPVKV 106 (785)
Q Consensus 83 D~G~Y~C~a~~~~~~~~~~~~v~v 106 (785)
|+|.|+|.|.|..|.....+.|.|
T Consensus 76 D~G~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 76 DKGNYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCEEEEEEEEeCCCEEEEEEEEEE
Confidence 999999999999999888877776
No 490
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.40 E-value=5.5e-13 Score=111.14 Aligned_cols=92 Identities=12% Similarity=0.226 Sum_probs=77.2
Q ss_pred cCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEE
Q psy2775 9 EGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYT 88 (785)
Q Consensus 9 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 88 (785)
...||.|...+.++.+.+|++++|.|.+.+.|.+ +.|++++..+....++.+..++.. .+|.|.+++.+|+|.|+
T Consensus 5 ~~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~----~~L~I~~v~~~D~G~Y~ 79 (106)
T 2dlt_A 5 SSGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRF----HKLVIDDVRPEDEGDYT 79 (106)
T ss_dssp SCCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTE----EEEEESSCCTTTCSCEE
T ss_pred CCCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCE----EEEEECCCCcCCCEEEE
Confidence 4578999999999999999999999999988877 999999999988877777655432 46999999999999999
Q ss_pred EEEEcCCeeEEEEeeEEEe
Q psy2775 89 VVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 89 C~a~~~~~~~~~~~~v~v~ 107 (785)
|.|.|. .....+.|.|.
T Consensus 80 C~a~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 80 FVPDGY--ALSLSAKLNFL 96 (106)
T ss_dssp EEEETS--CCCCCBCEEEE
T ss_pred EEEccC--CceEEEEEEEE
Confidence 999998 33345556654
No 491
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.40 E-value=3.6e-13 Score=114.71 Aligned_cols=93 Identities=25% Similarity=0.432 Sum_probs=71.3
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCC----eeEEe-eCCeEEEEEc--cCCCCCCcee
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPK----KREIF-DGENIILELK--EADSETDAGD 629 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~----~~~~~-~~~~~~L~i~--~~~~~~d~G~ 629 (785)
.+|.|...+....+.+|++++|.|.+.|+|.|.|.|+|++..+..... ..... ++....|.|. +++. +|+|.
T Consensus 8 ~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~-~D~G~ 86 (117)
T 2v9t_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSR-PDEGV 86 (117)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBC-SSCEE
T ss_pred CCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCc-CcCEE
Confidence 368898888899999999999999999999999999999999875431 12222 2332233332 5677 99999
Q ss_pred EEEEEEcCCcceEEE-EEEEEE
Q psy2775 630 YKVVATNELGSATHG-ARVTVD 650 (785)
Q Consensus 630 Y~C~a~n~~g~~~~~-~~l~V~ 650 (785)
|+|.|.|..|...+. +.|.|.
T Consensus 87 Y~C~a~N~~G~~~s~~~~l~~~ 108 (117)
T 2v9t_A 87 YVCVARNYLGEAVSHDASLEVA 108 (117)
T ss_dssp EEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEeCccceEeeeEEEEhh
Confidence 999999999987664 566665
No 492
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.40 E-value=1.3e-13 Score=118.49 Aligned_cols=103 Identities=20% Similarity=0.292 Sum_probs=83.7
Q ss_pred cccccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCe-eEEEECCEEccC--CCCEEEeecCCccceEEEEEEcccCC
Q psy2775 5 ADILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPD-LLWYYNGEPLQE--TDEVVFSDQSDMHSYVSIVTIKSIKK 81 (785)
Q Consensus 5 ~~~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~-i~W~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~i~~~~~ 81 (785)
..|.+..||.|.. +..+.+.+|+++.|.|.+.|.|.|. |.|++++..+.. ..++.+..........++|+|.+++.
T Consensus 7 ~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (122)
T 2cry_A 7 GTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVR 85 (122)
T ss_dssp CCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCH
T ss_pred EEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCCh
Confidence 4567778999998 8999999999999999999999987 999999988865 35555532111112246799999999
Q ss_pred CCC-eEEEEEEEcCCeeEEEEeeEEEeC
Q psy2775 82 REE-GVYTVVAKNREGEAKMDIPVKVNT 108 (785)
Q Consensus 82 ~D~-G~Y~C~a~~~~~~~~~~~~v~v~~ 108 (785)
+|. |.|+|.|.|..|.....+.|.|..
T Consensus 86 ~D~~G~Y~C~a~N~~G~~~~~~~l~V~~ 113 (122)
T 2cry_A 86 ADFQTIYNCTAWNSFGSDTEIIRLKEQG 113 (122)
T ss_dssp HHHHSCEEEEEECSSCEEEEEECCCCSC
T ss_pred hhCCceEEEEEECCCCeEEEEEEEEECC
Confidence 999 999999999999998888887764
No 493
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.40 E-value=2.9e-12 Score=123.11 Aligned_cols=165 Identities=13% Similarity=0.158 Sum_probs=102.8
Q ss_pred eeecCCceEecCCCeEEEEEEEEecC--CCeeEEEECC--E---Ecc---------CCCCEEEeecCCccceEEEEEEcc
Q psy2775 15 FSKKTKPVYAEENSEVTLEVRLVAVP--EPDLLWYYNG--E---PLQ---------ETDEVVFSDQSDMHSYVSIVTIKS 78 (785)
Q Consensus 15 ~~~~~~~~~v~~G~~v~l~C~~~g~p--~~~i~W~~~~--~---~~~---------~~~~~~~~~~~~~~~~~~~L~i~~ 78 (785)
+...|..+.+.+|++++|.|.+.+.+ ...+.||+.. . .+. ...|+.+..+. ......|+|.+
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~--~~~~~sL~I~~ 81 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDI--AKNLAVLKILA 81 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEG--GGTEEEEEESS
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcC--CCCEEEEEECc
Confidence 55678889999999999999997654 3679999853 1 110 12344444321 12235699999
Q ss_pred cCCCCCeEEEEEEEcCC------ee--EEEEeeEEEeCC--CCCCCceecCCCceEeccCCcEEEEEEEecc-CCC-eEE
Q psy2775 79 IKKREEGVYTVVAKNRE------GE--AKMDIPVKVNTG--KPEKPSILEPLHDVSITEGESAVLSVQVGGE-PSP-KVE 146 (785)
Q Consensus 79 ~~~~D~G~Y~C~a~~~~------~~--~~~~~~v~v~~~--~~~~p~i~~~~~~~~~~~G~~v~l~C~~~g~-p~~-~v~ 146 (785)
++.+|+|.|.|.+.+.. +. -.....|.|... .+.+|.+... . ..+.|.|.+.|. |.+ .|+
T Consensus 82 v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~-------~-~~~~L~C~~~g~~P~~i~v~ 153 (229)
T 1hxm_A 82 PSERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVM-------K-NGTNVACLVKEFYPKDIRIN 153 (229)
T ss_dssp CCGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEE-------E-ETTEEEEEEESCBSSCCEEE
T ss_pred CCHhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEc-------C-CCCeEEEEEEEEeCCCEEEE
Confidence 99999999999998763 11 112235666531 2234443321 1 124899999885 443 899
Q ss_pred EeECCEEcccce-EEEeCCEEEEEEccc-CCCCcEEEEEEEEcCCe
Q psy2775 147 WYKDGKLIKDRQ-ITSEKNTHTLTLIQC-STKDKGRYSVKVTNKEG 190 (785)
Q Consensus 147 W~~~g~~~~~~~-~~~~~~~~~L~i~~~-~~~d~G~Y~C~a~n~~g 190 (785)
|+++ ..+.... ........++.+... ..+|.|.|+|.|.|..+
T Consensus 154 W~~~-~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~~ 198 (229)
T 1hxm_A 154 LVSS-KKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDNK 198 (229)
T ss_dssp EECS-SEEEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETTE
T ss_pred EecC-CEEecCccceEECCCCcEEEEECcccCCCCcEEEEEEeCCC
Confidence 9999 6664321 111111123333333 33788999999999864
No 494
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.40 E-value=6.8e-13 Score=115.37 Aligned_cols=86 Identities=29% Similarity=0.479 Sum_probs=71.3
Q ss_pred cCCceEecCCCeEEEEEEEEecCCCeeEEEECC----------------------------EEc-cCCCCEEEeecCCcc
Q psy2775 18 KTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNG----------------------------EPL-QETDEVVFSDQSDMH 68 (785)
Q Consensus 18 ~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~----------------------------~~~-~~~~~~~~~~~~~~~ 68 (785)
.|..+.+.+|++++|.|.+.|.|.|.|.|++++ ..+ ....++.+...+.
T Consensus 24 ~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~-- 101 (139)
T 1gxe_A 24 IPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKD-- 101 (139)
T ss_dssp CCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETT--
T ss_pred CCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCC--
Confidence 378899999999999999999999999999998 444 2334555443332
Q ss_pred ceEEEEEEcccCCCCCeEEEEEEEcCCeeEEEEeeEEEe
Q psy2775 69 SYVSIVTIKSIKKREEGVYTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 69 ~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
.++|+|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 102 --~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 102 --RSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp --EEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred --EEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 3579999999999999999999999999888888874
No 495
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.39 E-value=4.2e-12 Score=128.83 Aligned_cols=169 Identities=17% Similarity=0.232 Sum_probs=110.1
Q ss_pred ecCCceEecCCCeEEEEEEEEecC--------------CCeeEEEEC--CE--E-c--cCC----------CCEEEeec-
Q psy2775 17 KKTKPVYAEENSEVTLEVRLVAVP--------------EPDLLWYYN--GE--P-L--QET----------DEVVFSDQ- 64 (785)
Q Consensus 17 ~~~~~~~v~~G~~v~l~C~~~g~p--------------~~~i~W~~~--~~--~-~--~~~----------~~~~~~~~- 64 (785)
.++..+.+.+|++++|.|..+..+ ...+.||+. ++ . + ..+ .+..+...
T Consensus 163 tq~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~ 242 (401)
T 3f8u_B 163 THTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWD 242 (401)
T ss_dssp ESCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEES
T ss_pred CCCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeec
Confidence 356789999999999999986443 357899974 32 1 1 111 11122111
Q ss_pred -C---CccceEEEEEEcccCCCCCeEEEEEEEcCCeeEEEEeeEEEeCCCCCCCceecCCCceE-eccCC-cEEEEEEEe
Q psy2775 65 -S---DMHSYVSIVTIKSIKKREEGVYTVVAKNREGEAKMDIPVKVNTGKPEKPSILEPLHDVS-ITEGE-SAVLSVQVG 138 (785)
Q Consensus 65 -~---~~~~~~~~L~i~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~v~~~~~~~p~i~~~~~~~~-~~~G~-~v~l~C~~~ 138 (785)
+ +......+|+|.+++.+|+|.|.|.+.+..+.....+.|.|. .+|.+...+.... +..|+ .++|.|.+.
T Consensus 243 ~~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~----~pP~V~v~p~~~~~~~~G~~~vtL~C~a~ 318 (401)
T 3f8u_B 243 DDEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVY----KPPKVSLMPATLARAAPGEAPPELLCLVS 318 (401)
T ss_dssp CCCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEE----BCCEEEEESSSCCCCCTTCCCCCEEEEEE
T ss_pred ccccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeec----cCCeEeeccCcceeecCCCccEEEEEEec
Confidence 1 123356789999999999999999999988877777888887 4677765544433 45676 799999998
Q ss_pred cc-CC--CeEEEe-ECCE-----Eccc-----ceEEEeCC----EEEEEEcccCC-CCcEEEEEEEEcCC
Q psy2775 139 GE-PS--PKVEWY-KDGK-----LIKD-----RQITSEKN----THTLTLIQCST-KDKGRYSVKVTNKE 189 (785)
Q Consensus 139 g~-p~--~~v~W~-~~g~-----~~~~-----~~~~~~~~----~~~L~i~~~~~-~d~G~Y~C~a~n~~ 189 (785)
|. |. +.|+|+ +|+. .... ......++ .+.|.+...+. ++.+.|+|++.|..
T Consensus 319 GfyP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 319 HFYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp EEBSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred CCcCCCCcEEEEEecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 85 55 689995 8752 1111 01111122 23455554432 34569999999876
No 496
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=3.4e-13 Score=111.25 Aligned_cols=92 Identities=15% Similarity=0.264 Sum_probs=75.7
Q ss_pred cccCCCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCC----CEEEeecCCccceEEEEEEcccCCC
Q psy2775 7 ILEGIPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETD----EVVFSDQSDMHSYVSIVTIKSIKKR 82 (785)
Q Consensus 7 ~~~~~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~----~~~~~~~~~~~~~~~~L~i~~~~~~ 82 (785)
.+.+.||.|...+.++.+.+|++++|.|.+.+.| +.+.|++++..+.... ++.+..++. ...|+|.+++.+
T Consensus 3 sv~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~----~~~L~I~~~~~~ 77 (101)
T 2edk_A 3 SGSSGPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGK----RHILIFSDVVQE 77 (101)
T ss_dssp SSCCCCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSS----EEEEECSSCCGG
T ss_pred ccccCCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCC----EEEEEECCCChh
Confidence 3567899999999999999999999999999888 8999999999887766 456655443 256999999999
Q ss_pred CCeEEEEEEEcCCeeEEEEeeEEEe
Q psy2775 83 EEGVYTVVAKNREGEAKMDIPVKVN 107 (785)
Q Consensus 83 D~G~Y~C~a~~~~~~~~~~~~v~v~ 107 (785)
|+|.|+|.|.| ....+.|.|.
T Consensus 78 D~G~Y~C~a~n----~~~~~~l~V~ 98 (101)
T 2edk_A 78 DRGRYQVITNG----GQCEAELIVE 98 (101)
T ss_dssp GCSBEEEECSS----CEECCBEEEE
T ss_pred hCEEEEEEEcC----CcEEEEEEEe
Confidence 99999999987 2344556665
No 497
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.39 E-value=2e-12 Score=104.18 Aligned_cols=84 Identities=14% Similarity=0.263 Sum_probs=72.0
Q ss_pred CCCeeeecCCceEecCCCeEEEEEEEEecCCCeeEEEECCEEccCCCCEEEeecCCccceEEEEEEcccCCCCCeEEEEE
Q psy2775 11 IPPTFSKKTKPVYAEENSEVTLEVRLVAVPEPDLLWYYNGEPLQETDEVVFSDQSDMHSYVSIVTIKSIKKREEGVYTVV 90 (785)
Q Consensus 11 ~~p~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 90 (785)
.++.|...|..+.+.+|++++|.|.+.|.|.+.+.|++++..+....+ ..|.|.+++.+|+|.|+|.
T Consensus 2 ~~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~-------------~~L~i~~v~~~d~G~Y~C~ 68 (91)
T 3bfo_A 2 SKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK-------------KLYMVPYVDLEHQGTYWCH 68 (91)
T ss_dssp CCCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCCS-------------SEEEESSCCGGGCEEEEEE
T ss_pred CceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCCC-------------CeEEECCCCHHhCEEEEEE
Confidence 578899999999999999999999999999999999999988765432 2499999999999999999
Q ss_pred EEcCCeeEE-EEeeEEEe
Q psy2775 91 AKNREGEAK-MDIPVKVN 107 (785)
Q Consensus 91 a~~~~~~~~-~~~~v~v~ 107 (785)
|.|..|... ..+.|.|.
T Consensus 69 a~n~~g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 69 VYNDRDSQDSKKVEIIID 86 (91)
T ss_dssp EECSSCEEECCCEEEEEC
T ss_pred EEcCCCCEEeeeEEEEEe
Confidence 999998654 34556653
No 498
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=2e-12 Score=107.13 Aligned_cols=88 Identities=26% Similarity=0.406 Sum_probs=78.4
Q ss_pred CCCeEeeeeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEc
Q psy2775 557 QAPLFIERFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATN 636 (785)
Q Consensus 557 ~~p~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n 636 (785)
.+|.|...+.+..+.+|++++|.|. .|.|.|.|.|+|++..+..+.++.+..++....|.|.++.. +|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~--- 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEK-ADSDTYTCD--- 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCT-TTCSEEEEE---
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCc-ccCEEEEEE---
Confidence 4688888889999999999999999 48999999999999999888888777778888999999999 999999998
Q ss_pred CCcceEEEEEEEEE
Q psy2775 637 ELGSATHGARVTVD 650 (785)
Q Consensus 637 ~~g~~~~~~~l~V~ 650 (785)
.|....++.|.|.
T Consensus 82 -~g~~~~~~~l~V~ 94 (103)
T 2dku_A 82 -IGQAQSRAQLLVQ 94 (103)
T ss_dssp -CSSCBCCEEEEEE
T ss_pred -eCCceEEEEEEEe
Confidence 6777777888876
No 499
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=4.2e-12 Score=107.23 Aligned_cols=87 Identities=16% Similarity=0.194 Sum_probs=72.0
Q ss_pred CCeEeeeeee---eeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEE
Q psy2775 558 APLFIERFEE---KTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVA 634 (785)
Q Consensus 558 ~p~~~~~~~~---~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a 634 (785)
+|.++..+.. ..+.+|++++|.|.+. .|.+.+.|+|+|..+..+.++.+...+...+|.|.++.. +|+|.|+|.|
T Consensus 10 pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~a 87 (113)
T 2cpc_A 10 VSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQL-EDSGEYLCEI 87 (113)
T ss_dssp CSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCT-TTCEEEEEES
T ss_pred CCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCc-ccCEEEEEEE
Confidence 4555544433 6788999999999995 899999999999999888777777777778999999999 9999999999
Q ss_pred EcCCcceEEEEEEEEE
Q psy2775 635 TNELGSATHGARVTVD 650 (785)
Q Consensus 635 ~n~~g~~~~~~~l~V~ 650 (785)
.| ...++.|.|.
T Consensus 88 ~n----~~~~~~l~V~ 99 (113)
T 2cpc_A 88 DD----ESASFTVTVT 99 (113)
T ss_dssp SS----CEEEEEEEEE
T ss_pred ec----CcEEEEEEEe
Confidence 99 4556667765
No 500
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=4.9e-13 Score=109.72 Aligned_cols=81 Identities=25% Similarity=0.350 Sum_probs=67.9
Q ss_pred eeeeeeeeecCeEEEEEEEecCCCCceEEEeCCEEecCCCCeeEEeeCCeEEEEEccCCCCCCceeEEEEEEcCCcceEE
Q psy2775 564 RFEEKTVKEKGTIRLMAKVKASPAPSIVWFRNNKPLLSSPKKREIFDGENIILELKEADSETDAGDYKVVATNELGSATH 643 (785)
Q Consensus 564 ~~~~~~v~~g~~v~l~C~~~g~P~p~v~W~~~~~~i~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~ 643 (785)
.+....+.+|+.++|.|.+.|.| |.|.|+|++..+....+..+. ..+|.|.++.. +|+|.|+|.|.|..|....
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~-~D~G~Y~C~a~n~~g~~~~ 82 (99)
T 2cr3_A 9 EVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT----GEEVEVQDSVP-ADSGLYACVTSSPSGSDTT 82 (99)
T ss_dssp CEEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC----SSEEEETTCCT-TTCEEEEEEEEETTEEEEE
T ss_pred CCcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE----CCEEEEccCCH-HHCEEEEEEEEeCCceEEE
Confidence 34577899999999999999987 799999999988766554332 34799999999 9999999999999998877
Q ss_pred EEEEEEE
Q psy2775 644 GARVTVD 650 (785)
Q Consensus 644 ~~~l~V~ 650 (785)
++.|.|.
T Consensus 83 ~~~l~V~ 89 (99)
T 2cr3_A 83 YFSVNVS 89 (99)
T ss_dssp EEEECBC
T ss_pred EEEEEEe
Confidence 7766665
Done!