BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2779
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0IFL2|RUVB1_AEDAE RuvB-like helicase 1 OS=Aedes aegypti GN=pont PE=3 SV=1
Length = 456
Score = 77.0 bits (188), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/52 (75%), Positives = 44/52 (84%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
MKIEEVKSTVKTQRI++HSHVKGLGL ENG +MAAGLVGQ+ ARE + V
Sbjct: 1 MKIEEVKSTVKTQRIAAHSHVKGLGLDENGVPLQMAAGLVGQKDAREAAGIV 52
>sp|Q9DE26|RUVB1_XENLA RuvB-like 1 OS=Xenopus laevis GN=ruvbl1 PE=2 SV=1
Length = 456
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/47 (78%), Positives = 41/47 (87%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
MKIEEVKST KTQRI++HSHVKGLGL ENG A + AAGLVGQ+ ARE
Sbjct: 1 MKIEEVKSTTKTQRIATHSHVKGLGLDENGIAKQAAAGLVGQENARE 47
>sp|Q29AK9|RUVB1_DROPS RuvB-like helicase 1 OS=Drosophila pseudoobscura pseudoobscura
GN=pont PE=3 SV=1
Length = 456
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/52 (73%), Positives = 44/52 (84%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
MKIEEVKSTV+TQRI++HSHVKGLGL E G A + AAGLVGQ+AARE + V
Sbjct: 1 MKIEEVKSTVRTQRIAAHSHVKGLGLDEAGSALQSAAGLVGQKAAREAAGIV 52
>sp|Q8AWW7|RUVB1_DANRE RuvB-like 1 OS=Danio rerio GN=ruvbl1 PE=2 SV=1
Length = 456
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/53 (69%), Positives = 43/53 (81%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAVT 53
MKIEEVKST KTQRI+SHSHVKGLGL E G A + A+GLVGQ++ARE +T
Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDEAGNAKQSASGLVGQESAREACGIIT 53
>sp|Q9VH07|RUVB1_DROME RuvB-like helicase 1 OS=Drosophila melanogaster GN=pont PE=1 SV=1
Length = 456
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/52 (73%), Positives = 43/52 (82%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
MKIEEVKSTV+TQRI++HSHVKGLGL E G A AAGLVGQ+AARE + V
Sbjct: 1 MKIEEVKSTVRTQRIAAHSHVKGLGLDEVGAAVHSAAGLVGQKAAREAAGIV 52
>sp|P60123|RUVB1_RAT RuvB-like 1 OS=Rattus norvegicus GN=Ruvbl1 PE=1 SV=1
Length = 456
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/47 (76%), Positives = 41/47 (87%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
MKIEEVKST KTQRI+SHSHVKGLGL E+G A + A+GLVGQ+ ARE
Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENARE 47
>sp|P60122|RUVB1_MOUSE RuvB-like 1 OS=Mus musculus GN=Ruvbl1 PE=1 SV=1
Length = 456
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/47 (76%), Positives = 41/47 (87%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
MKIEEVKST KTQRI+SHSHVKGLGL E+G A + A+GLVGQ+ ARE
Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENARE 47
>sp|Q9Y265|RUVB1_HUMAN RuvB-like 1 OS=Homo sapiens GN=RUVBL1 PE=1 SV=1
Length = 456
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 36/47 (76%), Positives = 41/47 (87%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
MKIEEVKST KTQRI+SHSHVKGLGL E+G A + A+GLVGQ+ ARE
Sbjct: 1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENARE 47
>sp|Q9C0X6|RUVB1_SCHPO RuvB-like helicase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rvb1 PE=3 SV=1
Length = 456
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAVT 53
++I EVK + RI++HSH+KGLGLKE+G + G +GQ+ ARE +T
Sbjct: 2 VQISEVKGNGRDNRITTHSHIKGLGLKEDGTCESVGGGFIGQEKAREACGIIT 54
>sp|Q4ICA8|RUVB1_GIBZE RuvB-like helicase 1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=RVB1 PE=3 SV=1
Length = 458
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
++I EVK + R ++H+H+KGLGLK +G A + AAG VGQ AARE
Sbjct: 2 VQISEVKGNKRDNRTAAHTHIKGLGLKSDGYAEKQAAGFVGQAAARE 48
>sp|Q8WZS3|RUVB1_NEUCR RuvB-like helicase 1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rvb-1
PE=3 SV=1
Length = 458
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAVTWEKSFQF 60
++I EVK + R ++H+H+KGLGL G A + A+G VGQ ARE V
Sbjct: 2 VQISEVKGNSRDNRTAAHTHIKGLGLNSQGIAEKQASGFVGQTTAREACGVVV------- 54
Query: 61 ERCKSHSLFRGGRAVAGG 78
+ K+H + G +AGG
Sbjct: 55 DLIKAHKMAGRGVLLAGG 72
>sp|Q4WPW8|RUVB1_ASPFU RuvB-like helicase 1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rvb1
PE=3 SV=1
Length = 458
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
++I EVK + + R ++H+H+KGLGL+ +G A A G VGQ AARE V
Sbjct: 2 VQISEVKGSSRENRTAAHTHIKGLGLRPDGTAEPSADGFVGQAAAREACGVV 53
>sp|Q6CB52|RUVB1_YARLI RuvB-like helicase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=RVB1 PE=3 SV=1
Length = 453
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
++I E+KS + R ++H+H++GLGL E G A + AG VGQ ARE
Sbjct: 2 VQINEIKSNSRDTRTAAHTHIRGLGLNEMGVAKPIDAGFVGQTEARE 48
>sp|P0CR26|RUVB1_CRYNJ RuvB-like helicase 1 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=RVB1 PE=3
SV=1
Length = 484
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 8 STVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
ST++ QRI++HSH+KGLGL ++G A + G +GQ ARE
Sbjct: 25 STLREQRIATHSHIKGLGLADDGTAMSSSQGFIGQILARE 64
>sp|P0CR27|RUVB1_CRYNB RuvB-like helicase 1 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=RVB1 PE=3 SV=1
Length = 484
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 8 STVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
ST++ QRI++HSH+KGLGL ++G A + G +GQ ARE
Sbjct: 25 STLREQRIATHSHIKGLGLADDGTAMSSSQGFIGQILARE 64
>sp|Q5BBV9|RUVB1_EMENI RuvB-like helicase 1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rvb1 PE=3
SV=3
Length = 458
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
++I EVK + R ++H+H+KGLGL+ +G A G VGQ AARE V
Sbjct: 2 VQISEVKGNSRDNRTAAHTHIKGLGLRPDGTAEVSGDGWVGQAAAREACGVV 53
>sp|Q54UW5|RUVB2_DICDI RuvB-like helicase 2 OS=Dictyostelium discoideum GN=rvb2 PE=1
SV=1
Length = 469
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 2 KIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVS 49
KI +VK + +RI +HSH++GLG+ ++ E E++ G+VGQ AR+ +
Sbjct: 5 KISQVKDLTRIERIGAHSHIRGLGIDDSLEPREISQGMVGQVGARKAA 52
>sp|Q4P112|RUVB1_USTMA RuvB-like helicase 1 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RVB1 PE=3 SV=1
Length = 488
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 27/34 (79%)
Query: 14 RISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
RI++HSH+KGLGL ++G A A G VGQ+AARE
Sbjct: 31 RIATHSHIKGLGLSDDGTALPSAQGFVGQKAARE 64
>sp|Q6BI60|RUVB1_DEBHA RuvB-like helicase 1 OS=Debaryomyces hansenii (strain ATCC 36239
/ CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RBV1
PE=3 SV=1
Length = 457
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 1 MKIEEVKST-VKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
++I EVK T + R ++H+H+KGLGL E+G A + G VGQ ARE
Sbjct: 2 VQINEVKDTQTRESRTAAHTHIKGLGLDEHGIAKRVEGGFVGQSDARE 49
>sp|Q2TBU9|RUVB2_BOVIN RuvB-like 2 OS=Bos taurus GN=RUVBL2 PE=2 SV=3
Length = 463
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 2 KIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAR 46
K+ E++ + +RI +HSH++GLGL + E + + G+VGQ AAR
Sbjct: 9 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAAR 53
>sp|P83571|RUVB2_DANRE RuvB-like 2 OS=Danio rerio GN=ruvbl2 PE=1 SV=1
Length = 463
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 2 KIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAR 46
K+ EV+ + +RI +HSH++GLGL + E +++ G+VGQ A+R
Sbjct: 9 KVPEVRDITRIERIGAHSHIRGLGLDDALEPRQVSQGMVGQLASR 53
>sp|Q9WTM5|RUVB2_MOUSE RuvB-like 2 OS=Mus musculus GN=Ruvbl2 PE=2 SV=3
Length = 463
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 2 KIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
K+ E++ + +RI +HSH++GLGL + E + + G+VGQ AAR + V
Sbjct: 9 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVV 59
>sp|Q9Y230|RUVB2_HUMAN RuvB-like 2 OS=Homo sapiens GN=RUVBL2 PE=1 SV=3
Length = 463
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 2 KIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
K+ E++ + +RI +HSH++GLGL + E + + G+VGQ AAR + V
Sbjct: 9 KVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVV 59
>sp|Q9DE27|RUVB2_XENLA RuvB-like 2 OS=Xenopus laevis GN=ruvbl2 PE=2 SV=1
Length = 462
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 2 KIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
K+ EV+ + +RI +HSH++GLGL + E +++ G+VGQ A+R + +
Sbjct: 8 KVPEVRDVTRIERIGAHSHIRGLGLDDALEPRQVSQGMVGQLASRRAAGVI 58
>sp|Q16TA2|RUVB2_AEDAE RuvB-like helicase 2 OS=Aedes aegypti GN=rept PE=3 SV=1
Length = 465
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 5 EVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAR 46
EV+ + +RI +HSH++GLGL + EA ++ G+VGQ+ AR
Sbjct: 8 EVRDITRIERIGAHSHIRGLGLDDVLEARAVSQGMVGQKDAR 49
>sp|Q29DI0|RUVB2_DROPS RuvB-like helicase 2 OS=Drosophila pseudoobscura pseudoobscura
GN=rept PE=3 SV=1
Length = 480
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 5 EVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAR 46
EV+ + +RI +HSH++GLGL + EA ++ G+VGQ+ AR
Sbjct: 8 EVRDITRIERIGAHSHIRGLGLDDVLEARAVSQGMVGQKDAR 49
>sp|Q9V3K3|RUVB2_DROME RuvB-like helicase 2 OS=Drosophila melanogaster GN=rept PE=1 SV=1
Length = 481
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 5 EVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAR 46
EV+ + +RI +HSH++GLGL + EA ++ G+VGQ+ AR
Sbjct: 8 EVRDVTRIERIGAHSHIRGLGLDDVLEARLVSQGMVGQKDAR 49
>sp|Q6CQA9|RUVB1_KLULA RuvB-like helicase 1 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RVB1 PE=3 SV=1
Length = 457
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 2 KIEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
+++E ST T R ++H+H+KGLGL E G A ++ G VGQ ARE
Sbjct: 6 EVQEQSSTAYT-RTAAHTHIKGLGLDEFGVAKQVEGGFVGQAEARE 50
>sp|Q5A0W7|RUVB1_CANAL RuvB-like helicase 1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=RVB1 PE=3 SV=1
Length = 458
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 1 MKIEEVK--STVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
++I EVK + + R ++H+H+KGLGL E G A + G VGQ ARE
Sbjct: 2 VQITEVKENQSSRESRTAAHTHIKGLGLNEQGIAKPIEGGFVGQNEARE 50
>sp|O94692|RUVB2_SCHPO RuvB-like helicase 2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rvb2 PE=1 SV=1
Length = 465
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 11 KTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAR 46
K +RI +HSH+KG+GL +N E E + G+VGQ AR
Sbjct: 13 KLERIGAHSHIKGIGLNDNLEPKESSQGMVGQVKAR 48
>sp|Q750R1|RUVB1_ASHGO RuvB-like helicase 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=RVB1 PE=3 SV=1
Length = 459
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 1 MKIEEVKSTVKTQ----RISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
++I EVK V R ++H+H+KGLGL E G A ++ G VGQ ARE
Sbjct: 2 VQISEVKDQVPGSSAGARTAAHTHIKGLGLDEFGAAKQVEGGFVGQVEARE 52
>sp|Q4P6N7|RUVB2_USTMA RuvB-like helicase 2 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RVB2 PE=3 SV=1
Length = 476
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 9 TVKT-QRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVS 49
T++T +RI +HSHVKGLGL + E + G+VGQ+AAR+ +
Sbjct: 11 TIQTLERIGAHSHVKGLGLDDQLEPRPSSQGMVGQRAARKAA 52
>sp|Q6FU78|RUVB1_CANGA RuvB-like helicase 1 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RVB1 PE=3
SV=1
Length = 457
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 14 RISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
R ++H+H+KGLGL + G A ++ G VGQ ARE
Sbjct: 17 RTAAHTHIKGLGLDDTGAARQVEGGFVGQVEARE 50
>sp|Q03940|RUVB1_YEAST RuvB-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RVB1 PE=1 SV=1
Length = 463
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 14 RISSHSHVKGLGLKENGEANEMAAGLVGQQAARE 47
R ++H+H+KGLGL E+G A + G VGQ ARE
Sbjct: 23 RTAAHTHIKGLGLDESGVAKRVEGGFVGQIEARE 56
>sp|Q5AGZ9|RUVB2_CANAL RuvB-like helicase 2 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=RVB2 PE=3 SV=1
Length = 498
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 15 ISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
I++HSH+ GLGL +N + E A G+VGQ +AR+ + +
Sbjct: 24 IAAHSHISGLGLDDNLQPKENAQGMVGQLSARKAAGVI 61
>sp|P0CR28|RUVB2_CRYNJ RuvB-like helicase 2 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=RVB2 PE=3
SV=1
Length = 463
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 6 VKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVS 49
++ K +RI HSH+ GLGL N E + G++GQ AR+ +
Sbjct: 12 MRDVTKMERIGVHSHIHGLGLDSNLEPRASSQGMIGQGKARKAA 55
>sp|P0CR29|RUVB2_CRYNB RuvB-like helicase 2 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=RVB2 PE=3 SV=1
Length = 463
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 6 VKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVS 49
++ K +RI HSH+ GLGL N E + G++GQ AR+ +
Sbjct: 12 MRDVTKMERIGVHSHIHGLGLDSNLEPRASSQGMIGQGKARKAA 55
>sp|Q6BSB8|RUVB2_DEBHA RuvB-like helicase 2 OS=Debaryomyces hansenii (strain ATCC 36239
/ CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RVB2
PE=3 SV=1
Length = 480
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 15 ISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
I++HSH+ GLGL +N + E G+VGQ AR+ + +
Sbjct: 21 IAAHSHISGLGLDDNLQPKESGQGMVGQLKARKAAGVI 58
>sp|Q6CT29|RUVB2_KLULA RuvB-like helicase 2 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RVB2 PE=3 SV=1
Length = 467
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 15 ISSHSHVKGLGLKENGEANEMAAGLVGQQAAR 46
I++HSH+ GLGL EN + + G+VGQ AR
Sbjct: 18 IAAHSHISGLGLDENLQPKPSSQGMVGQLQAR 49
>sp|Q8STP2|RUVB1_ENCCU RuvB-like protein 1 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RVB1 PE=1 SV=1
Length = 426
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 10 VKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVS 49
VK+ I+ HSHV+ LGL + G E ++GQ+ ARE +
Sbjct: 2 VKSSNIAIHSHVRSLGLDDCGNPVEKPDAVIGQENAREAA 41
>sp|Q12464|RUVB2_YEAST RuvB-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RVB2 PE=1 SV=1
Length = 471
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 15 ISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
I++HSH+ GLGL EN + + G+VGQ AR + +
Sbjct: 20 IAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVI 57
>sp|Q755G5|RUVB2_ASHGO RuvB-like helicase 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=RVB2 PE=3 SV=2
Length = 469
Score = 35.8 bits (81), Expect = 0.078, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 15 ISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
I++HSH+ GLGL EN + + G+VGQ AR + +
Sbjct: 19 IATHSHIVGLGLDENLQPKPSSQGMVGQLQARRAAGVI 56
>sp|Q6FSF1|RUVB2_CANGA RuvB-like helicase 2 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RVB2 PE=3
SV=1
Length = 476
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 15 ISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAV 52
I++HSH+ GLGL +N + + G+VGQ AR + +
Sbjct: 21 IAAHSHITGLGLDDNLQPRASSEGMVGQLQARRAAGVI 58
>sp|Q6C3X6|RUVB2_YARLI RuvB-like helicase 2 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=RVB2 PE=3 SV=2
Length = 466
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 15/75 (20%)
Query: 15 ISSHSHVKGLGLKENG-EANEMAAGLVGQQAAREVSRAVTWEKSFQFERCKSHSLFRGGR 73
+++HSH+ GLGL+ N E A G+VGQ AR + V + + G+
Sbjct: 18 VAAHSHITGLGLEPNSLTPKENAQGMVGQVKARRAAAVVLQ-------------MIKDGK 64
Query: 74 AVAGGRTKCPKPPNT 88
+AG PP+T
Sbjct: 65 -IAGRSVLLAGPPST 78
>sp|Q873C7|RUVB2_NEUCR RuvB-like helicase 2 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rvb-2
PE=3 SV=1
Length = 481
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 15/75 (20%)
Query: 15 ISSHSHVKGLGLKENGEANEMAA-GLVGQQAAREVSRAVTWEKSFQFERCKSHSLFRGGR 73
I++HSH++GLG+ + +A+ GLVGQ+ AR+ + AV E + + G+
Sbjct: 20 IAAHSHIRGLGVDADTLEPRVASQGLVGQEKARKAA-AVVLE------------MIKQGK 66
Query: 74 AVAGGRTKCPKPPNT 88
+AG PP+T
Sbjct: 67 -IAGRAVLIAGPPST 80
>sp|Q4WKH9|RUVB2_ASPFU RuvB-like helicase 2 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rvb2
PE=3 SV=1
Length = 469
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 15 ISSHSHVKGLGLKENG-EANEMAAGLVGQQAAREVSRAV 52
I++HSH++GLG+ + + + GLVGQ+ AR+ + +
Sbjct: 20 IAAHSHIRGLGVDADSLQPRTSSQGLVGQEKARKAAAVI 58
>sp|Q4I948|RUVB2_GIBZE RuvB-like helicase 2 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=RVB2 PE=3 SV=2
Length = 473
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 MKIEEVKSTVKTQRISSHSHVKGLGLKENG-EANEMAAGLVGQQAAREVS 49
M + + K I++HSH++GLG+ E + GLVGQ+ AR+ +
Sbjct: 6 MTVSDSKDLRGLNLIAAHSHIRGLGVDATTLEPRASSQGLVGQEKARKAA 55
>sp|Q8SU27|RUVB2_ENCCU RuvB-like helicase 2 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RVB2 PE=1 SV=1
Length = 418
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 5 EVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAR 46
E++ RI+ HSH+ GLG + E GLVGQ AR
Sbjct: 2 EIRDVETVNRINLHSHIAGLGC-DGDEVEYDKDGLVGQIKAR 42
>sp|Q5BGK3|RUVB2_EMENI RuvB-like helicase 2 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rvb2 PE=3
SV=2
Length = 468
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 15 ISSHSHVKGLGLK-ENGEANEMAAGLVGQQAAREVSRAV 52
I++HSH++GLG+ ++ + + GLVGQ+ AR+ + +
Sbjct: 20 IAAHSHIRGLGVDVDSLQPRPASQGLVGQEKARKAAAVI 58
>sp|Q2KCH9|CHER_RHIEC Probable chemotaxis protein methyltransferase OS=Rhizobium etli
(strain CFN 42 / ATCC 51251) GN=cheRch1 PE=4 SV=1
Length = 268
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 3 IEEVKSTVKTQRISSHSHVKGLGLKENGEANEMAAGLVGQQAAREVSRAVT------WEK 56
+ E K+++ R+S H ++ LGL E E+ A G A RE+ +T + +
Sbjct: 10 LNETKASLVYSRLSKH--IRNLGLSGFREYCELVASPAGAAARREMLSHLTTNFTRFFRE 67
Query: 57 SFQFERCKSHSLFR-GGRAVAGGRTKC 82
+ FE + H L RA +GGR +
Sbjct: 68 NHHFEHLRDHVLPELLQRARSGGRVRI 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.127 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,907,810
Number of Sequences: 539616
Number of extensions: 1269461
Number of successful extensions: 2268
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2225
Number of HSP's gapped (non-prelim): 51
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)