RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2779
         (101 letters)



>d1rp1a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Dog (Canis familiaris) [TaxId: 9615]}
          Length = 337

 Score = 24.7 bits (53), Expect = 2.8
 Identities = 6/34 (17%), Positives = 11/34 (32%)

Query: 51  AVTWEKSFQFERCKSHSLFRGGRAVAGGRTKCPK 84
           ++     F    C S+  F   +        CP+
Sbjct: 274 SILNPDGFASYPCASYRAFESNKCFPCPDQGCPQ 307


>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
           {Rat (Rattus norvegicus) [TaxId: 10116]}
          Length = 338

 Score = 24.0 bits (51), Expect = 4.1
 Identities = 7/34 (20%), Positives = 11/34 (32%)

Query: 51  AVTWEKSFQFERCKSHSLFRGGRAVAGGRTKCPK 84
           ++     F    C S+  F+           CPK
Sbjct: 275 SILNPDGFLGYPCSSYEKFQQNDCFPCPEEGCPK 308


>d2ccva1 b.154.1.1 (A:1-99) Agglutinin HPA {Roman snail (Helix
          pomatia) [TaxId: 6536]}
          Length = 99

 Score = 22.5 bits (48), Expect = 9.5
 Identities = 4/19 (21%), Positives = 11/19 (57%)

Query: 41 GQQAAREVSRAVTWEKSFQ 59
          G+   RE+++ +T+   + 
Sbjct: 24 GRDNTRELAKNITFASPYC 42


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.313    0.127    0.372 

Gapped
Lambda     K      H
   0.267   0.0621    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 353,813
Number of extensions: 13151
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 3
Length of query: 101
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 39
Effective length of database: 1,556,336
Effective search space: 60697104
Effective search space used: 60697104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.1 bits)