Query psy2780
Match_columns 451
No_of_seqs 156 out of 1332
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 16:42:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2780.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2780hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 8E-125 3E-129 961.0 25.2 441 1-441 1-441 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 6E-122 2E-126 938.1 21.4 432 1-442 1-432 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 3E-111 1E-115 869.7 28.7 433 1-441 2-444 (475)
4 2btq_B Tubulin btubb; structur 100.0 1E-108 5E-113 844.0 20.9 423 1-435 1-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 8E-108 3E-112 846.1 23.5 427 1-441 3-436 (473)
6 1w5f_A Cell division protein F 100.0 4.2E-43 1.4E-47 349.5 10.6 287 1-361 21-314 (353)
7 2vap_A FTSZ, cell division pro 100.0 1.3E-42 4.5E-47 346.5 9.6 283 3-361 39-327 (364)
8 2r75_1 Cell division protein F 100.0 4.3E-43 1.5E-47 348.5 5.8 296 3-381 9-311 (338)
9 1ofu_A FTSZ, cell division pro 100.0 5.8E-42 2E-46 338.3 11.7 285 3-361 13-303 (320)
10 1rq2_A Cell division protein F 100.0 3.4E-42 1.2E-46 345.2 8.0 285 2-360 12-301 (382)
11 2vaw_A FTSZ, cell division pro 100.0 2.1E-41 7E-46 340.8 12.3 287 2-361 12-303 (394)
12 2vxy_A FTSZ, cell division pro 100.0 4.3E-41 1.5E-45 337.2 11.3 285 2-360 12-301 (382)
13 3m89_A FTSZ/tubulin-related pr 100.0 6.5E-37 2.2E-41 305.8 12.2 275 4-325 45-353 (427)
14 4dxd_A Cell division protein F 100.0 7E-31 2.4E-35 260.5 9.6 266 4-337 20-290 (396)
15 3v3t_A Cell division GTPase FT 100.0 1.5E-30 5.1E-35 255.6 9.9 195 4-259 7-207 (360)
16 4ei7_A Plasmid replication pro 99.7 1.5E-18 5.2E-23 175.1 7.8 217 4-261 18-245 (389)
17 3r4v_A Putative uncharacterize 99.2 8.3E-12 2.8E-16 118.2 6.3 171 3-240 4-177 (315)
18 2e4h_B Tubulin alpha-ubiquitou 97.0 0.00059 2E-08 44.2 3.4 26 416-441 1-26 (36)
19 3bed_A PTS system, IIA compone 55.9 6 0.00021 33.2 2.5 36 115-151 45-80 (142)
20 3lfh_A Manxa, phosphotransfera 55.1 8.5 0.00029 32.5 3.3 39 115-153 43-82 (144)
21 3gx1_A LIN1832 protein; APC633 52.3 16 0.00055 30.2 4.6 40 115-156 44-83 (130)
22 3uue_A LIP1, secretory lipase 50.2 9.5 0.00033 35.9 3.2 79 105-188 111-190 (279)
23 1pdo_A Mannose permease; phosp 50.1 12 0.0004 31.1 3.4 39 115-153 41-79 (135)
24 3g7n_A Lipase; hydrolase fold, 48.9 9 0.00031 35.7 2.8 58 105-166 97-154 (258)
25 3ipr_A PTS system, IIA compone 44.4 16 0.00054 31.0 3.4 41 115-155 41-81 (150)
26 3gdw_A Sigma-54 interaction do 42.1 25 0.00084 29.4 4.2 40 115-156 44-85 (139)
27 3mtq_A Putative phosphoenolpyr 40.9 7.5 0.00026 33.5 0.8 38 116-153 61-98 (159)
28 3f1i_H Hepatocyte growth facto 33.4 25 0.00085 27.4 2.5 52 378-434 30-90 (98)
29 3o0d_A YALI0A20350P, triacylgl 30.9 23 0.00077 33.7 2.4 55 106-164 128-182 (301)
30 2p10_A MLL9387 protein; putati 30.4 19 0.00065 34.0 1.7 34 115-156 13-46 (286)
31 1tia_A Lipase; hydrolase(carbo 29.4 30 0.001 32.3 3.0 53 104-160 109-161 (279)
32 1uwc_A Feruloyl esterase A; hy 26.8 27 0.00093 32.3 2.1 51 105-159 98-148 (261)
33 3ngm_A Extracellular lipase; s 26.7 30 0.001 33.2 2.5 54 105-162 109-162 (319)
34 2nx2_A Hypothetical protein YP 24.5 2.1E+02 0.0073 24.7 7.5 93 134-240 43-136 (181)
35 2wlt_A L-asparaginase; hydrola 23.5 1.2E+02 0.0042 29.0 6.1 97 110-211 65-162 (332)
36 2iu1_A EIF5, eukaryotic transl 23.4 34 0.0012 30.7 2.0 52 384-435 98-154 (208)
37 3b48_A Uncharacterized protein 23.4 30 0.001 28.6 1.5 28 118-146 50-77 (135)
38 1tib_A Lipase; hydrolase(carbo 22.2 35 0.0012 31.6 1.9 53 104-160 110-162 (269)
39 1o7j_A L-asparaginase; atomic 22.2 1.2E+02 0.004 29.1 5.7 97 110-211 65-162 (327)
40 1wsa_A Asparaginase, asparagin 22.1 1.3E+02 0.0044 28.9 6.0 97 110-211 63-160 (330)
41 3ct6_A PTS-dependent dihydroxy 21.8 46 0.0016 27.4 2.4 26 118-145 45-70 (131)
42 3ff5_A PEX14P, peroxisomal bio 21.5 25 0.00087 24.4 0.6 24 398-424 30-53 (54)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=7.7e-125 Score=961.01 Aligned_cols=441 Identities=93% Similarity=1.491 Sum_probs=423.5
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccc
Q psy2780 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 80 (451)
Q Consensus 1 MrEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~ 80 (451)
|||||+||+||||||||.+||+++|.||+|+++|.+.++++....+++.++||+|.+.++|+||||||||||++|++++.
T Consensus 1 mrEii~iqvGQcGnQIG~~~We~~~~EHgi~~~g~~~~~~~~~~~~~~~~~fF~e~~~gk~vPRavlvDlEp~vid~v~~ 80 (451)
T 3ryc_A 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRT 80 (451)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTSCCCCC-------CGGGGTEEECTTSCEEESEEEEESSSHHHHHHHH
T ss_pred CceEEEEeccCchhHHHHHHHHHHHhhcCCCCCCCcCCcccccccccchhhhcccCCCCccccceeeecCCcchhheeee
Confidence 99999999999999999999999999999999999876654333467899999999999999999999999999999999
Q ss_pred ccccccCCccccccCCccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhh
Q psy2780 81 GTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVD 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~ 160 (451)
|+++++|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||++|||+++||+|||||||+|+.|+|.|+++
T Consensus 81 g~~~~lf~p~~~i~gk~gAgNNwA~G~yt~G~e~~d~v~d~IRk~~E~cD~lqGF~i~hSlgGGTGSG~gs~lle~L~~e 160 (451)
T 3ryc_A 81 GTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD 160 (451)
T ss_dssp STTTTTSCGGGEEECSSCCTTCHHHHHHTSHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSHHHHHHHHHHHHHHHHH
T ss_pred cccccccCHHHeeeccccccCCCCeeecccchHhHHHHHHHHHHHHHcCCCccceEEEeccCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhcCcc
Q psy2780 161 YGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
Q Consensus 161 y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~ 240 (451)
||++.+++++|+|++..+++++++||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|+
T Consensus 161 y~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 240 (451)
T 3ryc_A 161 YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
T ss_dssp TTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhccCCCCCchhhHHHHHhccccccc
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeeecccc
Q psy2780 241 SLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 320 (451)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 320 (451)
++||||.+|.|+.++.+|||||||+||++++|+|+.+..+..++++++.+|++++|++.|||.+|+|++|+|++|++++|
T Consensus 241 slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 320 (451)
T 3ryc_A 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYR 320 (451)
T ss_dssp HHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTCGGGBSSCCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhccccceEecCCCCCchheehhhcc
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCCcccCCCCccchhchhhhccCCchHHHHHHHHHHHHHHHhh
Q psy2780 321 GDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGRLDHKFDLMYA 400 (451)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~~~~~~~~ 400 (451)
|+++++++.+++..+|.|++++|++|+|+++|+++|++||.+.|+.+++++++++++|+|+|+|.+.|+++.+||++||+
T Consensus 321 G~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~kv~i~~~pP~~~p~~~la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~ 400 (451)
T 3ryc_A 321 GDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYA 400 (451)
T ss_dssp ESCCHHHHHHHHHHHHHHCCCCBCTTSCEEEEEEEECSCCCCCTTSSBCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHhhcCCcceEEEccCceeeeeeccCCccCCCccccccceeeEEecCchHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeccccCCCCcchHHHHHHHHHHHHHHHHHhccccCC
Q psy2780 401 KRAFIHWYVGEGMEEGEFSEAREDLGALEKDYEEMGEEAGE 441 (451)
Q Consensus 401 rkAflH~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~ 441 (451)
||||||||++|||||+||.||+++|.+|+++|++++.+..|
T Consensus 401 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~ 441 (451)
T 3ryc_A 401 KRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVE 441 (451)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred cceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999876654
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=6.4e-122 Score=938.06 Aligned_cols=432 Identities=41% Similarity=0.797 Sum_probs=415.9
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccc
Q psy2780 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 80 (451)
Q Consensus 1 MrEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~ 80 (451)
|||||+||+||||||||.+||+++|.||+|+++|.+.+++.. ..++.++||+|...++|+||||||||||++|++++.
T Consensus 1 mrEii~i~vGQcGnQiG~~~We~~~~EHgi~~~g~~~~~~~~--~~~~~~~fF~e~~~~~~vpRavlvDlEp~vid~i~~ 78 (445)
T 3ryc_B 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDL--QLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRS 78 (445)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSBBCCSCTH--HHHTGGGTEEECSTTBEEECEEEEESSSHHHHHHHT
T ss_pred CceEEEEecCCcHHHHHHHHHHHHHHHhCCCCCCCccCCccc--cccchhhccccCCCCccccceeEecCCchhhhhhhc
Confidence 999999999999999999999999999999999987655432 245789999999999999999999999999999999
Q ss_pred ccccccCCccccccCCccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhh
Q psy2780 81 GTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVD 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~ 160 (451)
|+++++|+|++++++++|+|||||+|||+.|+++.|+++|+||+++|+||.+|||+++||+|||||||+|+.|+|+|+++
T Consensus 79 g~~~~lf~p~~~i~g~~gAgNN~A~G~yt~G~e~~d~v~d~IRk~~E~cd~lqGf~i~hSlgGGTGSG~gs~lle~L~~e 158 (445)
T 3ryc_B 79 GPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158 (445)
T ss_dssp STTGGGSCGGGEEECSSCCTTCHHHHHHSHHHHHHHHHHHHHHHHHHTCSSEEEEEEEEESSSSHHHHHHHHHHHHHHHH
T ss_pred ccccceecccceEEccccccCCccccchhhhHHHHHHHHHHHHHHHHcCCccceEEEEeecCCCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhcCcc
Q psy2780 161 YGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
Q Consensus 161 y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~ 240 (451)
||++.+++++|+|++..++++++|||++|++++|.+++|+++++||++|+++|.+.+++..|+|.++|++||++++++|+
T Consensus 159 y~kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l~i~~p~y~~lN~lIa~~~s~iT~ 238 (445)
T 3ryc_B 159 YPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238 (445)
T ss_dssp CTTSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhccCCCCCcchhhHHHHHhcchhhcc
Confidence 99999999999999778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeeecccc
Q psy2780 241 SLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 320 (451)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 320 (451)
++||||.+|.|+.++.+|||||||+||++++++|+++..+..++++++.+|++++|+++|+|.+|+|++|+|+++++++|
T Consensus 239 slRf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~~~n~m~~~dp~~gky~a~~~~~R 318 (445)
T 3ryc_B 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMMAACDPRHGRYLTVATIFR 318 (445)
T ss_dssp HHHSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTSGGGBSSSCCGGGSCEEEEEEEEE
T ss_pred ccccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHhhcCCeeecCCCCCcceeeeeeee
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCCcccCCCCccchhchhhhccCCchHHHHHHHHHHHHHHHhh
Q psy2780 321 GDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGRLDHKFDLMYA 400 (451)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~~~~~~~~ 400 (451)
|+++++++.+++..+|.|++.+|++|+|+++|+++|++||.. +++++++|+|+|+|.++|+++.+||++||+
T Consensus 319 G~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~k~~i~~~pp~~--------~~~s~~~lsNsTaI~~~~~rl~~kFd~m~~ 390 (445)
T 3ryc_B 319 GRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG--------LKMSSTFIGNSTAIQELFKRISEQFTAMFR 390 (445)
T ss_dssp ESCCHHHHHHHHHHHHHHTGGGBCTTSTTCEEEEEESSCCTT--------CSEEEEEEEEEGGGHHHHHHHHHHHHHHHT
T ss_pred cCCChHHHHHHHHHHHhhCcccCcccCCCceeeeeeccCCcc--------cceeeeeecCcHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999998863 357899999999999999999999999999
Q ss_pred cccceeccccCCCCcchHHHHHHHHHHHHHHHHHhccccCCC
Q psy2780 401 KRAFIHWYVGEGMEEGEFSEAREDLGALEKDYEEMGEEAGEG 442 (451)
Q Consensus 401 rkAflH~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~~ 442 (451)
||||||||++|||||+||.||+++|++|+++|++++....|+
T Consensus 391 krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~ 432 (445)
T 3ryc_B 391 RKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADE 432 (445)
T ss_dssp TTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred cccchhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 999999999999999999999999999999999998776544
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=3.4e-111 Score=869.72 Aligned_cols=433 Identities=31% Similarity=0.590 Sum_probs=404.2
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccc
Q psy2780 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 80 (451)
Q Consensus 1 MrEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~ 80 (451)
||||||||+||||||||++||++++.||+++++|.+.+... ...+++++||+|.+.++|+||+|||||||++|+.++.
T Consensus 2 ~rEiItiqvGQ~GnqIG~~fWe~~~~Ehgi~~~g~~~~~~~--~~~~~~~vfF~e~~~~~yvPRavlvDLEp~vid~i~~ 79 (475)
T 3cb2_A 2 PREIITLQLGQCGNQIGFEFWKQLCAEHGISPEAIVEEFAT--EGTDRKDVFFYQADDEHYIPRAVLLDLEPRVIHSILN 79 (475)
T ss_dssp CCCEEEEEEHHHHHHHHHHHHHHHHHHTTBCTTSCBCTTCC--TTSSCGGGTEEECTTSCEEECEEEEESSSHHHHHHHH
T ss_pred CccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCCcCccc--ccccccceeeeecCCCceecceeEecCCcceeeeecc
Confidence 79999999999999999999999999999999998754322 2346899999999999999999999999999999999
Q ss_pred ccccccCCccccccCCc--cccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhh
Q psy2780 81 GTYRQLFHPEQLISGKE--DAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERIS 158 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~ 158 (451)
++++.+|+|++++.+++ |+||||++| |+.|++..|+++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+
T Consensus 80 ~~~~~lf~p~~~i~g~~g~gAgnn~a~G-~~~g~e~~d~~~d~Ir~~~E~cD~lqgf~i~~slGGGTGSG~~s~l~e~l~ 158 (475)
T 3cb2_A 80 SPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLN 158 (475)
T ss_dssp STTTTTSCGGGEEECCTTCCCTTCHHHH-HHHHHHHHHHHHHHHHHHHHTCSSCCEEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred ccccccCCccceeecccccCCCCCchhh-hhhhHhhHHHHHHHHHHHHhcCCCcceeEEeccCCCCCCcChHHHHHHHHH
Confidence 99999999999999988 799999999 578999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcceeEEEEecCCC-CCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhc
Q psy2780 159 VDYGKKSKLQYAIYPAPQ-VSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSS 237 (451)
Q Consensus 159 d~y~~~~i~~~~v~P~~~-~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (451)
++||++.+++++|+|++. .++.++++||++|++++|.+++|++++++|++|+++|.+.+++..|+|.++|++||+++++
T Consensus 159 dey~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~~~N~lia~~vs~ 238 (475)
T 3cb2_A 159 DRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSA 238 (475)
T ss_dssp HHSTTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHHHHHHHHhhhccc
Confidence 999999999999999964 6889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCcccccccccCCccCCccccccccccccCchhh-hcccccCHHHHHHhhcCCCCCccccCCC---CCcee
Q psy2780 238 ITASLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEK-AYHEQLSVAEITNACFEPANQMVKCDPR---HGKYM 313 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~-~~~~~~~~~~l~~~~~~~~n~~~~~~~~---~~~~l 313 (451)
+|.++||||.+|.|+.++.++||||||+||++++++|+.+..+ ..++++++.+|++++|+++|+|.+|+|+ .++|+
T Consensus 239 iT~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~~~~gkyl 318 (475)
T 3cb2_A 239 STTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYI 318 (475)
T ss_dssp HTTTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSCCCCC--CCCCEE
T ss_pred cccccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEecCcccccccchh
Confidence 9999999999999999999999999999999999999998877 7788999999999999999999999999 99999
Q ss_pred eeeccccccCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCCcccCCCCccchhchhhhccCCchHHHHHHHHHH
Q psy2780 314 ACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGRLDH 393 (451)
Q Consensus 314 s~~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~ 393 (451)
|+++++||++.++++.+++..+|.+++++|++|+|+++|+++|++||...++ .+.++++|+|+|+|.++|+++..
T Consensus 319 a~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~k~~i~~~~p~~~~~-----~~~s~~~lsN~TaI~~~f~ri~~ 393 (475)
T 3cb2_A 319 AILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSA-----HRVSGLMMANHTSISSLFERTCR 393 (475)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCEEEEEECCCCC----------CCEEEEEEEEGGGHHHHHHHHH
T ss_pred hhHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCceeeeeccCCccCCC-----cceEEEEecCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999976543 34678999999999999999999
Q ss_pred HHHHHhhcccceeccccCCCCc---chHHHHHHHHHHHHHHHHHhccccCC
Q psy2780 394 KFDLMYAKRAFIHWYVGEGMEE---GEFSEAREDLGALEKDYEEMGEEAGE 441 (451)
Q Consensus 394 ~~~~~~~rkAflH~Y~~~Gmee---~eF~Ea~~~l~~l~~~Y~~~~~~~~~ 441 (451)
||++||+||||||||++||||| +||.||+++|++|+++|++++..+..
T Consensus 394 kfd~m~~rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~~~~ 444 (475)
T 3cb2_A 394 QYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRPDYI 444 (475)
T ss_dssp HHHHHHHTTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSGGGS
T ss_pred HHHHHhhcccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999987 99999999999999999998766433
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=1.4e-108 Score=844.03 Aligned_cols=423 Identities=38% Similarity=0.700 Sum_probs=375.5
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccc
Q psy2780 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 80 (451)
Q Consensus 1 MrEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~ 80 (451)
|||||+||+||||||||++||++++.||+++++|.+.++.+ ....+++++||+|+..++|+||+|+||+||++|+.++.
T Consensus 1 MrEii~iq~GQ~GnqIg~~fW~~~~~ehgi~~~g~~~~~~~-~~~~~~~~~fF~e~~~~~yvPRav~vDle~~~l~~i~~ 79 (426)
T 2btq_B 1 VREILSIHVGQCGNQIADSFWRLALREHGLTEAGTLKEGSN-AAANSNMEVFFHKVRDGKYVPRAVLVDLEPGVIARIEG 79 (426)
T ss_dssp -CEEEEEEEHHHHHHHHHHHHHHHHHHHTBCTTSBBCC--------CCCTTTEEEEETTEEEECEEEEEECC--------
T ss_pred CCcEEEEecCCcHhHHHHHHHHHHHHHcCCCCCCCccCccc-ccccccccceeeecCCCceeeeeEEEecCccccccccc
Confidence 99999999999999999999999999999999998754431 22346899999999999999999999999999999999
Q ss_pred ccccccCCccccccCCccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhh
Q psy2780 81 GTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVD 160 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~ 160 (451)
++++.+|+|++++.+++|+||||++|||+.|+++.++++|+||+++|+||.+|||+|+||+|||||||+|+.|+|.|+|+
T Consensus 80 ~~~~~lf~p~~i~~g~~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~~~~l~e~l~~~ 159 (426)
T 2btq_B 80 GDMSQLFDESSIVRKIPGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGLGSLILERLRQA 159 (426)
T ss_dssp ----CCCCTTSEEECCSCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHHHHHHHHHHHTT
T ss_pred cccccccCcccccccccCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhcCcc
Q psy2780 161 YGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
Q Consensus 161 y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t~ 240 (451)
||++.+++++|+|++..++.++++||+++++++|.+++|+++++||++|+++|.+.++ ..++|.++|++||++++++|.
T Consensus 160 y~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~-~~~~f~~~N~lia~~v~~it~ 238 (426)
T 2btq_B 160 YPKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLN-RSPNYMDLNNIIALIVSSVTA 238 (426)
T ss_dssp CTTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSS-SCCCHHHHHHHHHHHHHHHHH
T ss_pred cCcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCC-CCcHHHHHHHHHHhhhcchhh
Confidence 9999999999999977789999999999999999999999999999999999999998 789999999999999999999
Q ss_pred ccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeeecccc
Q psy2780 241 SLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYR 320 (451)
Q Consensus 241 ~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~R 320 (451)
++||||.+|.|+.++.++|+|||++||++++++|+.+.....++.+++.+|++++|+++|+|.+|+|+.++|+|+++++|
T Consensus 239 ~lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~g~yla~~~i~r 318 (426)
T 2btq_B 239 SLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDWQQGVYLAASALFR 318 (426)
T ss_dssp HHHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCTTTCCEEEEEEEEE
T ss_pred hccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCCCCchHHHHHHHHc
Confidence 99999999999999999999999999999999999998888889999999999999999999999999999999999999
Q ss_pred ccCChhhHHHHHHhhhccCccCceecCC--CCceeeecCCCCcccCCCCccchhchhhhccCCchHHHHHHHHHHHHHHH
Q psy2780 321 GDVVPKDVNSAIATIKTKRTIQFVDWCP--TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGRLDHKFDLM 398 (451)
Q Consensus 321 G~~~~~~~~~~~~~~~~~~~~~f~~w~p--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~~~~~~ 398 (451)
|+++++++.+++..+ |++.+|++|+| +++|+++|++||.. ++.++++|+|+|+|.+.|+++.++|++|
T Consensus 319 G~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~k~~i~~~~p~~--------~~~s~~~lsNstaI~~~~~~~~~~f~~m 388 (426)
T 2btq_B 319 GDVKAKDVDENMATI--RKSLNYASYMPASGGLKLGYAETAPEG--------FASSGLALVNHTGIAAVFERLIAQFDIM 388 (426)
T ss_dssp CC----CTTTTHHHH--HTTSCBCTTSCSSCSEEEEEESCCCTT--------CSSBCCEEEEEGGGHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHH--hcCCCCcccCCCCCceeeeeeccCCCC--------CcceeEEecCChHHHHHHHHHHHHHHHH
Confidence 999999999888877 67889999999 99999999998853 3457899999999999999999999999
Q ss_pred hhcccceeccccCCCCcchHHHHHHHHHHHHHHHHHh
Q psy2780 399 YAKRAFIHWYVGEGMEEGEFSEAREDLGALEKDYEEM 435 (451)
Q Consensus 399 ~~rkAflH~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~ 435 (451)
|+||||||||++|||||+||.||+++|++|+++|+++
T Consensus 389 ~~rrAflh~Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 389 FDNHAYTHWYENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp HHTTSSHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccchhhhccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999986
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=7.9e-108 Score=846.15 Aligned_cols=427 Identities=38% Similarity=0.732 Sum_probs=390.5
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHhcCCCCC-CCCCCCCCCCCCCCCccceee---eCCCCccccceeEeCCCCcccc
Q psy2780 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPD-GQMPSDKMIGGGDDSFSTFFS---ETGAGKHVPRAVFVDLEPTVVD 76 (451)
Q Consensus 1 MrEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~~~F~---e~~~~~~~pR~lliD~e~~~i~ 76 (451)
|||||+||+||||||||++||+++|.||+++++ |.+.++.. . .+++++||+ |.+.++|+||+|+|||||++|+
T Consensus 3 mrEii~iqvGQcGnqIG~~~We~~~~Ehgi~~~~g~~~~~~~--~-~~~~~~fF~~~~e~~~~~~vpRav~vDlep~vi~ 79 (473)
T 2bto_A 3 VNNTIVVSIGQAGNQIAASFWKTVCLEHGIDPLTGQTAPGVA--P-RGNWSSFFSKLGESSSGSYVPRAIMVDLEPSVID 79 (473)
T ss_dssp CCEEEEEEEHHHHHHHHHHHHHHHHHHHTCCTTTCCCSSSCC--C-SSSGGGTEEECSCC--CCEEECEEEEESSSHHHH
T ss_pred cccEEEEecCCcHHHHHHHHHHHHHHhcCCCCCCCeecCCCc--c-cccccceecccccccCCceeeeeeEecCcchhhh
Confidence 999999999999999999999999999999999 88765433 2 568999999 9999999999999999999999
Q ss_pred ccccccccccCCccccccCCccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHH
Q psy2780 77 EVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMER 156 (451)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~ 156 (451)
.++.++ +.+|+|++++++++|+||||++|||+.|+++.++++|+||+++|.||.+|||+|+||+|||||||+|+.|+|.
T Consensus 80 ~i~~~~-~~lf~p~~~it~~~GAgnn~a~G~~~~G~~~~ee~~d~Ir~~~e~cD~lqgf~i~~slgGGTGSG~~~~l~e~ 158 (473)
T 2bto_A 80 NVKATS-GSLFNPANLISRTEGAGGNFAVGYLGAGREVLPEVMSRLDYEIDKCDNVGGIIVLHAIGGGTGSGFGALLIES 158 (473)
T ss_dssp HHHHHS-TTCSCGGGEEECSSCCTTCHHHHHTSHHHHHHHHHHHHHHHHHHHCSSEEEEEEEEESSSSHHHHHHHHHHHH
T ss_pred hhhccc-cccccccceEecccCCCCCcCCCcchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeeCCCCCCcchHHHHHHH
Confidence 998888 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhh
Q psy2780 157 ISVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVS 236 (451)
Q Consensus 157 l~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~ 236 (451)
|+++||++.+++++|+|++..++.++++||++|++++|.+++|+++++||++|+++|.+.+++..++|.++|++||++++
T Consensus 159 l~e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~~N~lia~~v~ 238 (473)
T 2bto_A 159 LKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDDLNLLITEALA 238 (473)
T ss_dssp HHHHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHHHHHHHhhhcc
Confidence 99999999999999999977789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCccc--ccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceee
Q psy2780 237 SITASLRFDGALNVD--LTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMA 314 (451)
Q Consensus 237 ~~t~~~r~~~~~~~~--l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls 314 (451)
++|.++||||.+|.| +.++.++|||||++||++++++|+.+.....++..++.++++++|++.|+|..|+|+.++|++
T Consensus 239 ~it~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp~~gkyla 318 (473)
T 2bto_A 239 GITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAACSPMEGRFLS 318 (473)
T ss_dssp HHHHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSSSCGGGSCEEE
T ss_pred cchhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceeecCCCCchHHH
Confidence 999999999999999 999999999999999999999999998888889999999999999999999999999999999
Q ss_pred eeccccccCChhhH-HHHHHhhhccCccCceecCCCCceeeecCCCCcccCCCCccchhchhhhccCCchHHHHHHHHHH
Q psy2780 315 CCMLYRGDVVPKDV-NSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGRLDH 393 (451)
Q Consensus 315 ~~~~~RG~~~~~~~-~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Nst~i~~~l~~l~~ 393 (451)
+++++||+++++++ .+++..++.+++.+| |+|+++|+++|++||. ++++++++|+|+|+|.++|+++.+
T Consensus 319 ~~~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~kv~i~~~pp~--------g~~~s~~~lsNsTaI~~~~~~l~~ 388 (473)
T 2bto_A 319 TAVLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAFKIGYVEQPGI--------SHRKSMVLLANNTEIARVLDRICH 388 (473)
T ss_dssp EEEEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCEEEEEESSCCS--------SCSEEEEEEEEETTHHHHHHHHHH
T ss_pred HHHhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcceecccccCCc--------CcceeEEEecCCchHHHHHHHHHH
Confidence 99999999999999 999999999989999 9999999999999886 246789999999999999999999
Q ss_pred HHHHHhhcccceeccccCCCCcchHHHHHHHHHHHHHHHHHhccccCC
Q psy2780 394 KFDLMYAKRAFIHWYVGEGMEEGEFSEAREDLGALEKDYEEMGEEAGE 441 (451)
Q Consensus 394 ~~~~~~~rkAflH~Y~~~Gmee~eF~Ea~~~l~~l~~~Y~~~~~~~~~ 441 (451)
+|++||+||||||||+++||||+||.||+++|++|+++|++++....|
T Consensus 389 kf~~m~~rrAflH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~~~ 436 (473)
T 2bto_A 389 NFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEESGAK 436 (473)
T ss_dssp HHHHHHTTTTTHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHhhhcchhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999999999999999999999999999999998765433
No 6
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=4.2e-43 Score=349.50 Aligned_cols=287 Identities=16% Similarity=0.217 Sum_probs=238.6
Q ss_pred CEeEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccc
Q psy2780 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRT 80 (451)
Q Consensus 1 MrEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~ 80 (451)
|++|++|++|||||++++++|+ |+++ + ++.+.+|+|.+.++.+..
T Consensus 21 ~~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~~ia~nTD~q~L~~~~a 65 (353)
T 1w5f_A 21 NLKIKVIGVGGAGNNAINRMIE-----IGIH---------------------------G---VEFVAVNTDLQVLEASNA 65 (353)
T ss_dssp -CCEEEEEEHHHHHHHHHHHHH-----HCCT---------------------------T---EEEEEEESCHHHHHTCCC
T ss_pred CCEEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEEcCCHHHHhcCCC
Confidence 5789999999999999999998 4431 0 356899998887765421
Q ss_pred ccccccCCccccccCC-----ccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHH
Q psy2780 81 GTYRQLFHPEQLISGK-----EDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLME 155 (451)
Q Consensus 81 ~~~~~~~~~~~~~~~~-----~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle 155 (451)
|+.+..++ .|+||||+.| +++.++.+|.||+.+|.|| +|+|+||+|||||||+|+.|++
T Consensus 66 --------~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~~i~as~GGGTGSG~ap~la~ 129 (353)
T 1w5f_A 66 --------DVKIQIGENITRGLGAGGRPEIG-----EQAALESEEKIREVLQDTH---MVFITAGFGGGTGTGASPVIAK 129 (353)
T ss_dssp --------SEEEECCTTTTTTSCCTTCHHHH-----HHHHHHTHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHH
T ss_pred --------CcEEEccCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCC---EEEEEeccCCCccccHHHHHHH
Confidence 33444443 5999999964 7899999999999999998 4899999999999999999999
Q ss_pred HhhhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhh
Q psy2780 156 RISVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIV 235 (451)
Q Consensus 156 ~l~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i 235 (451)
.+++ |+ +++++|+|.+...|..+++||+.+++++|.+++|+++++||++|+++|.+.+.+. ++|+.+|++|++++
T Consensus 130 ~~ke-~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~v 204 (353)
T 1w5f_A 130 IAKE-MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDVKIK-DAFLKADETLHQGV 204 (353)
T ss_dssp HHHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTCCHH-HHHHHHHHHHHHHH
T ss_pred HHHH-hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccCCHH-HHHHHHHHHHHHHh
Confidence 9987 65 4555555444456889999999999999999999999999999999999888887 58999999999999
Q ss_pred hcCccccccCCCCcc--cccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCcee
Q psy2780 236 SSITASLRFDGALNV--DLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYM 313 (451)
Q Consensus 236 ~~~t~~~r~~~~~~~--~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~l 313 (451)
+++|.++||||.+|. |+.++.++|+| |++||+..+.+.- ..+..+++++.|+ +++..++++.++++
T Consensus 205 ~~it~~ir~pG~iNv~~D~~dv~t~L~~-~g~a~~g~g~a~g---------~~~v~ea~~~a~~--~~ll~~d~~~ak~~ 272 (353)
T 1w5f_A 205 KGISELITKRGYIRLTSRFARIESVMKD-AGAAILGIGVGKG---------EHRAREAAKKAME--SKLIEHPVENASSI 272 (353)
T ss_dssp HHHHHHHHCCCCCCHHHHHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CTTCCSCGGGCSEE
T ss_pred cCchhhccCCcccccccCHHHHHHhccC-CCeeEEEEeecCC---------cchHHHHHHHHHh--CCCcCCChhhccee
Confidence 999999999999999 99999999999 9999887765421 1356778888883 56667889999999
Q ss_pred eeeccccccCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCCc
Q psy2780 314 ACCMLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361 (451)
Q Consensus 314 s~~~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (451)
++++..|++.+++++.+.+..++.+... +..++++.+..++.
T Consensus 273 l~~i~~~~dl~~~ev~~a~~~I~~~~~~------~~~i~~G~~~d~~~ 314 (353)
T 1w5f_A 273 VFNITAPSNIRMEEVHEAAMIIRQNSSE------DADVKFGLIFDDEV 314 (353)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHTTSCT------TSEEEEEEEECTTS
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhhCC------CCcEEEEEEeCCCC
Confidence 9999999999999999998888775432 56677777766553
No 7
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=100.00 E-value=1.3e-42 Score=346.55 Aligned_cols=283 Identities=16% Similarity=0.235 Sum_probs=236.3
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccccc
Q psy2780 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 82 (451)
Q Consensus 3 Eiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~~ 82 (451)
+|++|++|||||++++++|+. +++ . -..+.+|+|.+.++.+..
T Consensus 39 ~I~vIGvGg~G~n~v~~m~~~-----gi~----------------g--------------v~fia~NTD~q~L~~~~a-- 81 (364)
T 2vap_A 39 KITVVGCGGAGNNTITRLKME-----GIE----------------G--------------AKTVAINTDAQQLIRTKA-- 81 (364)
T ss_dssp CEEEEEEHHHHHHHHHHHHHH-----TCT----------------T--------------EEEEEEESBHHHHHTSCC--
T ss_pred eEEEEeeCchHHHHHHHHHHh-----CCC----------------C--------------CCEEEEcCcHHHHhcCCC--
Confidence 699999999999999999983 321 0 123788888887765432
Q ss_pred ccccCCccccccC-----CccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHh
Q psy2780 83 YRQLFHPEQLISG-----KEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERI 157 (451)
Q Consensus 83 ~~~~~~~~~~~~~-----~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l 157 (451)
++.+..+ ..|+||||++| +++.++.+|+||+.+|.||.+ +++||+|||||||+|+.|++.+
T Consensus 82 ------~~ki~iG~~~t~G~GAGnn~a~G-----~~~~ee~~d~Ir~~le~~D~l---~i~as~GGGTGSG~ap~lae~l 147 (364)
T 2vap_A 82 ------DKKILIGKKLTRGLGAGGNPKIG-----EEAAKESAEEIKAAIQDSDMV---FITCGLGGGTGTGSAPVVAEIS 147 (364)
T ss_dssp ------SEEEECCTTTTTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCSEE---EEEEETTSSHHHHHHHHHHHHH
T ss_pred ------CcEEEeccccccCCCCCCChHHH-----HHHHHHHHHHHHHHHhcCCEE---EEeccCCCCCCCChHHHHHHHH
Confidence 3333333 46999999987 899999999999999999987 9999999999999999999999
Q ss_pred hhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhc
Q psy2780 158 SVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSS 237 (451)
Q Consensus 158 ~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (451)
++ | . +++++|+|.+...+.++++||+++++++|.+++|+++++||++|+++|. .+.+ .++|+.+|++|++++++
T Consensus 148 ke-~-~--~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~-~l~i-~~af~~~N~li~~~v~~ 221 (364)
T 2vap_A 148 KK-I-G--ALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVP-NMPL-KLAFKVADEVLINAVKG 221 (364)
T ss_dssp HH-T-T--CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHST-TCCH-HHHHHHHHHHHHHHHHH
T ss_pred HH-h-C--CcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHc-cCCh-hhhhhhHHHHHHHHHhh
Confidence 98 7 3 4556666554566889999999999999999999999999999999998 8888 78999999999999999
Q ss_pred CccccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeeec
Q psy2780 238 ITASLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCM 317 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~ 317 (451)
+|.++||||.+|.|+.++.++|+| |++||+..++++- .....+++++.+ .+++..++++.++++.+++
T Consensus 222 it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~--~~~ll~~d~~~ak~~l~~i 289 (364)
T 2vap_A 222 LVELITKDGLINVDFADVKAVMNN-GGLAMIGIGESDS---------EKRAKEAVSMAL--NSPLLDVDIDGATGALIHV 289 (364)
T ss_dssp HHHHHHSCCSBCCCHHHHHHHHTT-CEEEEEEEEEECS---------TTHHHHHHHHHH--TCTTCCSCGGGCCEEEEEE
T ss_pred hhHHhhcCCceeccHHHHHHhccC-CCeeEEEEEecCC---------cchHHHHHHHHH--hCcCcCcChhhcceEEEEE
Confidence 999999999999999999999999 9999988776531 124667777787 4677788999999999999
Q ss_pred cccccCChhhHHHHHHhhhccCccCceecCC-CCceeeecCCCCc
Q psy2780 318 LYRGDVVPKDVNSAIATIKTKRTIQFVDWCP-TGFKVGINYQPPT 361 (451)
Q Consensus 318 ~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p-~~~~~~~~~~~~~ 361 (451)
..||+.+++++.+.+..++.+.. | ..++.+.+..++.
T Consensus 290 ~~~~dl~~~ev~~a~~~I~~~~~-------~~a~ii~G~~~~~~~ 327 (364)
T 2vap_A 290 MGPEDLTLEEAREVVATVSSRLD-------PNATIIWGATIDENL 327 (364)
T ss_dssp EECTTCCHHHHHHHHHHHHHHSC-------TTCEEEEEEEECTTC
T ss_pred EeCCCCCHHHHHHHHHHHHHhcC-------CCCCEEEEEEecCCC
Confidence 99999999999999888876543 3 4566676666543
No 8
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=100.00 E-value=4.3e-43 Score=348.50 Aligned_cols=296 Identities=18% Similarity=0.239 Sum_probs=248.3
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccccc
Q psy2780 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 82 (451)
Q Consensus 3 Eiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~~ 82 (451)
.|..|++|++|+++..++|+ +++ ++ ++.|++|+|.+.++.+..
T Consensus 9 ~I~viGvGg~G~n~vn~m~~-----~~~---------------------------~g---v~~ia~NTD~q~L~~~~a-- 51 (338)
T 2r75_1 9 KIKVIGVGGGGSNAVNRMYE-----DGI---------------------------EG---VELYAINTDVQHLSTLKV-- 51 (338)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTC---------------------------CS---CEEEEEESBHHHHHTCCC--
T ss_pred eEEEEeeCccHHHHHHHHHH-----hCC---------------------------CC---ceEEEEECCHHHHhcCCC--
Confidence 48999999999999999998 111 11 688999999998876532
Q ss_pred ccccCCccccccC-----CccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHh
Q psy2780 83 YRQLFHPEQLISG-----KEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERI 157 (451)
Q Consensus 83 ~~~~~~~~~~~~~-----~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l 157 (451)
++.+..+ .+|+||||+.| +++.++.+|+||+++|.||.+ +++||+|||||||+++. ++.+
T Consensus 52 ------~~ki~iG~~~t~g~GAGnn~a~G-----~~~~ee~~d~Ir~~~e~~D~l---~i~~s~GGGTGSG~~~~-ia~l 116 (338)
T 2r75_1 52 ------PNKIQIGEKVTRGLGAGAKPEVG-----EEAALEDIDKIKEILRDTDMV---FISAGLGGGTGTGAAPV-IAKT 116 (338)
T ss_dssp ------SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHSSCSEE---EEEEETTSSHHHHHHHH-HHHH
T ss_pred ------CcEEEecCcccCCCCCCCChHHH-----HHHHHHHHHHHHHHHccCCee---EEecccCCCcCCCchHH-HHHH
Confidence 3344444 48999999965 799999999999999999988 99999999999999999 7778
Q ss_pred hhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhc
Q psy2780 158 SVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSS 237 (451)
Q Consensus 158 ~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (451)
+++|| +++++|+|.+...|.++++||+++++++|.+++|+++++||++|+++|.+.+.+. ++|+.+|++|++++++
T Consensus 117 ~~e~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~N~~i~~~v~~ 192 (338)
T 2r75_1 117 AKEMG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTIK-DAFKEVDSVLSKAVRG 192 (338)
T ss_dssp HHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSHH-HHHHHHHHHHHHHHHH
T ss_pred HHhcC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCChH-HHHHHHHHHHHHHHhh
Confidence 88897 5677777766678999999999999999999999999999999999999888887 7999999999999999
Q ss_pred CccccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeeec
Q psy2780 238 ITASLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCM 317 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~ 317 (451)
+|.++||||.+|.|+.++.++|+|+ +++|+..+++|-. ..........|+..+|+ .|++..+++ +++
T Consensus 193 it~~ir~pG~iNvD~~dv~t~L~~~-g~a~~g~g~a~g~----~r~~~a~~~ai~s~lle-~n~~~~a~~-------~l~ 259 (338)
T 2r75_1 193 ITSIVVTPAVINVDFADVRTTLEEG-GLSIIGMGEGRGD----EKADIAVEKAVTSPLLE-GNTIEGARR-------LLV 259 (338)
T ss_dssp HHHHHHSCCSBCCCHHHHHHHHTTC-EEEEEEEEEEEST----THHHHHHHHHHHCBSSB-SSCGGGCSE-------EEE
T ss_pred hhhhhccCCceeCCHHHhhhheeCC-ccceeeeccCCcc----chHHHHHHHHHHhhhhc-ccchhhhhe-------EEE
Confidence 9999999999999999999999999 8899988888721 22334455778888888 778877654 788
Q ss_pred cccc--cCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCCcccCCCCccchhchhhhccCC
Q psy2780 318 LYRG--DVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNT 381 (451)
Q Consensus 318 ~~RG--~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~Ns 381 (451)
++|| +.+++++.+.+..++.+. + .|.+++++++..+|.. .+.++|+++|.
T Consensus 260 ~i~G~~dl~~~ev~~a~~~I~~~~-----~-~~~~i~~G~~~~~~~~--------~~~~vtviatg 311 (338)
T 2r75_1 260 TIWTSEDIPYDIVDEVMERIHSKV-----H-PEAEIIFGAVLEPQEQ--------DFIRVAIVATD 311 (338)
T ss_dssp EEEECTTSCTTHHHHHHHHHHHHS-----C-TTCEEEEEEEECTTCC--------SEEEEEEEEEC
T ss_pred EEEcCCCCCHHHHHHHHHHHHHhc-----C-CCCcEEEEEEeCCCCC--------CeEEEEEEECC
Confidence 8999 889999999988887654 2 5888999999887752 24567778775
No 9
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=5.8e-42 Score=338.27 Aligned_cols=285 Identities=15% Similarity=0.181 Sum_probs=234.3
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccccc
Q psy2780 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 82 (451)
Q Consensus 3 Eiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~~ 82 (451)
+|++|++|||||++++++|+ |+++ + ++.+.+|+|.+.++.+.
T Consensus 13 ~I~viGvGg~G~n~v~~m~~-----~gi~---------------------------g---v~~i~~ntD~q~L~~~~--- 54 (320)
T 1ofu_A 13 VIKVIGVGGGGGNAVNHMAK-----NNVE---------------------------G---VEFICANTDAQALKNIA--- 54 (320)
T ss_dssp CEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------S---EEEEEEESBTGGGSSCS---
T ss_pred EEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEEcCCHHHHhcCC---
Confidence 69999999999999999998 3321 0 46689999998876653
Q ss_pred ccccCCccccccC-----CccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHh
Q psy2780 83 YRQLFHPEQLISG-----KEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERI 157 (451)
Q Consensus 83 ~~~~~~~~~~~~~-----~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l 157 (451)
.|+.+..+ ..|+||||+.| ++..++.+|+||+.+|.|| +|+|+||+|||||||+|+.|++ +
T Consensus 55 -----a~~~i~iG~~~t~g~GAG~n~~~G-----~~~~ee~~d~I~~~le~~d---~~~i~as~GGGTGSG~~~~la~-~ 120 (320)
T 1ofu_A 55 -----ARTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAE-V 120 (320)
T ss_dssp -----CSEEEECCHHHHTTBCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-H
T ss_pred -----CCcEEEccCCccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-H
Confidence 23444444 46899999955 7899999999999999998 5899999999999999997765 5
Q ss_pred hhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhc
Q psy2780 158 SVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSS 237 (451)
Q Consensus 158 ~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (451)
+.+|+ +..+++++.|+ ..|..+++||+.+++++|.+++|+++++||++|+++|.+.+.+. ++|+.+|++|++++++
T Consensus 121 a~e~g-~lt~~vv~~P~--~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i~-~af~~~n~~l~~~v~~ 196 (320)
T 1ofu_A 121 AKEMG-ILTVAVVTRPF--PFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVRG 196 (320)
T ss_dssp HHHTT-CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHHH
T ss_pred HHhcC-CcEEEEEeCCc--cccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCCCHH-HHHHHHHHHHHHHhcc
Confidence 56673 34444444454 56889999999999999999999999999999999999888887 6899999999999999
Q ss_pred CccccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccc-cCCCCCceeeee
Q psy2780 238 ITASLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVK-CDPRHGKYMACC 316 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~-~~~~~~~~ls~~ 316 (451)
+|.++||||.+|.|+.++.++|+| |++||+..++++- .....+++++.++ +++.. ++++.++++.++
T Consensus 197 it~~ir~pG~iNvD~~dv~t~l~~-~g~~~~g~g~a~g---------~~~~~~a~~~a~~--~~ll~~~d~~~ak~~l~~ 264 (320)
T 1ofu_A 197 ISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR--NPLLEDVNLQGARGILVN 264 (320)
T ss_dssp HHHHHHSCSSSSCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCCGGGCSEEEEE
T ss_pred cHhhcccCCceeecHHHHHHhccC-CCeeEEEEEecCc---------ccHHHHHHHHHHh--ccccccCCccccceEEEE
Confidence 999999999999999999999999 9999988776531 1234677777776 45555 888889999999
Q ss_pred ccccccCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCCc
Q psy2780 317 MLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361 (451)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (451)
+..|++.+++++.+.+..++.+... +..++.+.+..++.
T Consensus 265 i~~~~d~~~~ev~~a~~~i~~~~~~------~~~ii~G~~~~~~~ 303 (320)
T 1ofu_A 265 ITAGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADM 303 (320)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECTTC
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCC------CCcEEEEEEcCCCC
Confidence 9999999999999998888765432 45677777766553
No 10
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=100.00 E-value=3.4e-42 Score=345.23 Aligned_cols=285 Identities=13% Similarity=0.155 Sum_probs=233.5
Q ss_pred EeEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCccccccccc
Q psy2780 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81 (451)
Q Consensus 2 rEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~ 81 (451)
.+|++|++|||||+++.++|+ |+++ + .+.+.+|+|.+.++.+.
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~fia~NTD~q~L~~~~-- 54 (382)
T 1rq2_A 12 AVIKVVGIGGGGVNAVNRMIE-----QGLK---------------------------G---VEFIAINTDAQALLMSD-- 54 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------S---EEEEEEESCHHHHHHCC--
T ss_pred CEEEEECcCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEecCCHHHHhcCC--
Confidence 479999999999999999998 3321 0 46699999988876553
Q ss_pred cccccCCccccccC-----CccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHH
Q psy2780 82 TYRQLFHPEQLISG-----KEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMER 156 (451)
Q Consensus 82 ~~~~~~~~~~~~~~-----~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~ 156 (451)
.++.+..+ ..|+||||+.| +++.++.+|+||+.+|.|| +|+|+||+|||||||+++.|++
T Consensus 55 ------a~~~i~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~Ir~~le~~d---~~fi~as~GGGTGSG~ap~lae- 119 (382)
T 1rq2_A 55 ------ADVKLDVGRDSTRGLGAGADPEVG-----RKAAEDAKDEIEELLRGAD---MVFVTAGEGGGTGTGGAPVVAS- 119 (382)
T ss_dssp ------CSEEEECCTTTC-----CCCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-
T ss_pred ------CCcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHH-
Confidence 23344444 35899999965 7899999999999999998 5899999999999999999998
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhh
Q psy2780 157 ISVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVS 236 (451)
Q Consensus 157 l~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~ 236 (451)
++.+|+ +..+++++.|+ ..|.++++||+++++++|.+++|++|++||++|+++|.+.+.+. ++|+.+|++|+++++
T Consensus 120 la~e~g-~ltvsVv~~Pf--~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~vs 195 (382)
T 1rq2_A 120 IARKLG-ALTVGVVTRPF--SFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAVSLM-DAFRSADEVLLNGVQ 195 (382)
T ss_dssp HHHHHT-CEEEEEEEECC--GGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHcC-CcEEEEEecCc--ccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCCCHH-HHHHHHHHHHHHHHH
Confidence 777787 44455555564 57889999999999999999999999999999999999888887 689999999999999
Q ss_pred cCccccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeee
Q psy2780 237 SITASLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316 (451)
Q Consensus 237 ~~t~~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~ 316 (451)
++|.++||||.+|.|+.++.++|+| |+++|+..+++.- .....+++++.++ ++|..++++.++++.++
T Consensus 196 ~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~ 263 (382)
T 1rq2_A 196 GITDLITTPGLINVDFADVKGIMSG-AGTALMGIGSARG---------EGRSLKAAEIAIN--SPLLEASMEGAQGVLMS 263 (382)
T ss_dssp HHHHHHHSBCSSCCCHHHHHHHHTT-CEEEEEEEEEEES---------TTHHHHHHHHHHT--CGGGTTCGGGCSEEEEE
T ss_pred HHHHHHccCCceeccHHHHHHhccC-CCeeEEEeeeccc---------ccHHHHHHHHHHh--CcCcCCChhchheEEEE
Confidence 9999999999999999999999999 8888887665421 1345677777774 77778899989999887
Q ss_pred ccccccCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCC
Q psy2780 317 MLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360 (451)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~ 360 (451)
+..+++.+++++.+.+..++.+.. .+..++++.+..++
T Consensus 264 i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~ 301 (382)
T 1rq2_A 264 IAGGSDLGLFEINEAASLVQDAAH------PDANIIFGTVIDDS 301 (382)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECGG
T ss_pred EEeCCCCCHHHHHHHHHHHHHhhC------CCCCEEEEEEeCCC
Confidence 777779999999999888876543 25667777776654
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=100.00 E-value=2.1e-41 Score=340.83 Aligned_cols=287 Identities=16% Similarity=0.172 Sum_probs=238.0
Q ss_pred EeEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCccccccccc
Q psy2780 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81 (451)
Q Consensus 2 rEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~ 81 (451)
.+|++|++|||||+++.++|+ |+++ + .+.+.+|+|.+.+..+.
T Consensus 12 ~~I~vIGvGg~G~n~vn~m~~-----~gi~---------------------------g---v~fia~NTD~q~L~~~~-- 54 (394)
T 2vaw_A 12 AVIKVIGVGGGGGNAVNHMAK-----NNVE---------------------------G---VEFICANTDAQALKNIA-- 54 (394)
T ss_dssp CCEEEEEEHHHHHHHHHHHHT-----TTCC---------------------------S---EEEEEEESCTTTTSSCS--
T ss_pred CEEEEECcCchHHHHHHHHHH-----cCCC---------------------------C---CCEEEecCCHHHHhcCC--
Confidence 479999999999999999997 4331 0 35689999988876543
Q ss_pred cccccCCccccccC-----CccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHH
Q psy2780 82 TYRQLFHPEQLISG-----KEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMER 156 (451)
Q Consensus 82 ~~~~~~~~~~~~~~-----~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~ 156 (451)
.++.+..+ ..|+||||+.| +++.++.+|.||+.+|.|| +|+|+||+|||||||+|+.|++.
T Consensus 55 ------a~~ki~iG~~~t~G~GAG~n~~~G-----~~~aee~~d~I~~~le~~d---~~fI~asmGGGTGSG~ap~lae~ 120 (394)
T 2vaw_A 55 ------ARTVLQLGPGVTKGLGAGANPEVG-----RQAALEDRERISEVLEGAD---MVFITTGMGGGTGTGAAPIIAEV 120 (394)
T ss_dssp ------SSCEEECCHHHHSSSCCCSCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHHH
T ss_pred ------CCcEEEccccccCCCCCCCCHHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeecCCCccccHHHHHHHH
Confidence 23344444 46899999955 7889999999999999998 58999999999999999999999
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhh
Q psy2780 157 ISVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVS 236 (451)
Q Consensus 157 l~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~ 236 (451)
++ +|+ +++++|+|.+...|..+++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|+.+|++|+++++
T Consensus 121 ~k-e~g---~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~li~~~v~ 195 (394)
T 2vaw_A 121 AK-EMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASLL-AAFAKADDVLAGAVR 195 (394)
T ss_dssp HH-HHT---CEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCHH-HHHHHHHHHHHHHHH
T ss_pred HH-HcC---CcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCChH-HHHHHHHHHHHHHHH
Confidence 99 563 4455555443456889999999999999999999999999999999999888887 589999999999999
Q ss_pred cCccccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeee
Q psy2780 237 SITASLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316 (451)
Q Consensus 237 ~~t~~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~ 316 (451)
++|.++||||.+|.|+.++.++|+| |+++++..+.+.- ..+..+++++.|+ ++++..++++.++++.++
T Consensus 196 ~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~rv~ea~~~A~~-spLl~~~d~~~ak~~lv~ 264 (394)
T 2vaw_A 196 GISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASG---------PNRAREATEAAIR-NPLLEDVNLQGARGILVN 264 (394)
T ss_dssp HHHHHHHSBCSSCCCHHHHHHHHTT-TCCBEEEEEEECS---------TTHHHHHHHHHHT-CGGGTTCCTTTCSEEEEE
T ss_pred HHHHHhcCCCcccccHHHHHHhccC-CCceeEEEEeccc---------cchHHHHHHHHHh-cCccCCCCccccceeEEE
Confidence 9999999999999999999999999 7888776664421 2357788888888 667766899999999999
Q ss_pred ccccccCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCCc
Q psy2780 317 MLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPPT 361 (451)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~~ 361 (451)
+..|++.+++++.+.+..++.+... +..++++.+..++.
T Consensus 265 i~~~~dl~~~ev~~a~~~I~~~~~~------~a~i~~G~~~d~~~ 303 (394)
T 2vaw_A 265 ITAGPDLSLGEYSDVGNIIEQFASE------HATVKVGTVIDADM 303 (394)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSCT------TSEEEEEEEECSSC
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcCC------CCCEEEEeecCCCC
Confidence 9999999999999998888765432 45577777766553
No 12
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=100.00 E-value=4.3e-41 Score=337.20 Aligned_cols=285 Identities=14% Similarity=0.175 Sum_probs=234.2
Q ss_pred EeEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCccccccccc
Q psy2780 2 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTG 81 (451)
Q Consensus 2 rEiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~ 81 (451)
.+|.+|++||||+++++++|+ |+++ + .+.|.+|+|.+.++.+..
T Consensus 12 ~~I~vIGvGg~G~navn~m~~-----~gi~---------------------------g---v~fia~NTD~q~L~~~~a- 55 (382)
T 2vxy_A 12 ASIKVIGVGGGGNNAVNRMIE-----NEVQ---------------------------G---VEYIAVNTDAQALNLSKA- 55 (382)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH-----TTCC---------------------------S---CEEEEEESBHHHHHTCCC-
T ss_pred CEEEEEeeCchHHHHHHHHHH-----hCCC---------------------------C---CCEEEEeCCHHHHhcCCC-
Confidence 469999999999999999998 3321 0 566999999888766532
Q ss_pred cccccCCcccccc-----CCccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHH
Q psy2780 82 TYRQLFHPEQLIS-----GKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMER 156 (451)
Q Consensus 82 ~~~~~~~~~~~~~-----~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~ 156 (451)
++.+.. ...|+||||+.| +++.++.+|+||+.+|.|| +|+|+||+|||||||+|+.|++.
T Consensus 56 -------~~ki~iG~~~t~G~GAGnn~a~G-----~e~aee~~d~Ir~~le~~D---~ffI~asmGGGTGSG~apvla~~ 120 (382)
T 2vxy_A 56 -------EVKMQIGAKLTRGLGAGANPEVG-----KKAAEESKEQIEEALKGAD---MVFVTAGMGGGTGTGAAPVIAQI 120 (382)
T ss_dssp -------SEEEECCHHHHTTBCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEESSSSHHHHHHHHHHHH
T ss_pred -------CcEEEecccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHhhCC---EEEEEeccCCCCCCcHHHHHHHH
Confidence 223333 346999999954 7899999999999999998 48999999999999999999998
Q ss_pred hhhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhh
Q psy2780 157 ISVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVS 236 (451)
Q Consensus 157 l~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~ 236 (451)
+++ |+ +++++|+|.+...|.++++||+.+++++|.+++|++|++||++|+++|.+.+.+. ++|+.+|++|+++++
T Consensus 121 ake-~g---~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~i~-~af~~~N~ll~~~vs 195 (382)
T 2vxy_A 121 AKD-LG---ALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTPML-EAFREADNVLRQGVQ 195 (382)
T ss_dssp HHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCCHH-HHHHHHHHHHHHHHH
T ss_pred HHH-hC---CCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCCHH-HHHHHHHHHHHHHHH
Confidence 876 75 4444454444467899999999999999999999999999999999999888887 589999999999999
Q ss_pred cCccccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeee
Q psy2780 237 SITASLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC 316 (451)
Q Consensus 237 ~~t~~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~ 316 (451)
++|.++||||.+|.|+.++.++|+| |++||+..+++.- .....+++++.++ +++..++++.++++.++
T Consensus 196 gIt~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g---------~~r~~ea~~~a~~--s~ll~~d~~~ak~~l~~ 263 (382)
T 2vxy_A 196 GISDLIATPGLINLDFADVKTIMSN-KGSALMGIGIATG---------ENRAAEAAKKAIS--SPLLEAAIDGAQGVLMN 263 (382)
T ss_dssp HHHTTTSSCCTTCCCHHHHHHHTTC-SSEEEEEEEEEES---------TTHHHHHHHHHHT--CTTSCSCGGGCSEEEEE
T ss_pred HHHHHHcCCCccccCHHHHHHhccC-CCceEEEEEeccc---------ccHHHHHHHHHHh--CcCcCCChhhcceeEEE
Confidence 9999999999999999999999999 9999888776531 1345677888875 46677889889999887
Q ss_pred ccccccCChhhHHHHHHhhhccCccCceecCCCCceeeecCCCC
Q psy2780 317 MLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP 360 (451)
Q Consensus 317 ~~~RG~~~~~~~~~~~~~~~~~~~~~f~~w~p~~~~~~~~~~~~ 360 (451)
+..+++.+++++.+.+..++.+.. .+..++.+.+..++
T Consensus 264 i~gg~dl~~~ev~~a~~~I~~~~~------~~a~ii~G~~~d~~ 301 (382)
T 2vxy_A 264 ITGGTNLSLYEVQEAADIVASASD------QDVNMIFGSVINEN 301 (382)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHSC------TTCEEEEEEEECTT
T ss_pred EEeCCCCCHHHHHHHHHHHHHhcC------CCCCEEEEeecCCC
Confidence 777779999999999888876543 24556666665554
No 13
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=100.00 E-value=6.5e-37 Score=305.81 Aligned_cols=275 Identities=13% Similarity=0.095 Sum_probs=215.6
Q ss_pred EEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCccccccccccc
Q psy2780 4 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 83 (451)
Q Consensus 4 iitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~~~ 83 (451)
|..|.+||+|+.+.+++.+ ++ -.++++.||+|+||+++.+++.++..+.
T Consensus 45 i~VIGvGg~G~n~v~~m~~-----~~--------------------------~~~g~~~~~~iavNtd~~dl~~L~~~~~ 93 (427)
T 3m89_A 45 WGVIGAGQKGNKEADLFAG-----YK--------------------------FSNGTTCYPTLAVNFAESDMMHLQNIIK 93 (427)
T ss_dssp EEEEEEHHHHHHHHHHHTT-----CB--------------------------CTTSCBSCCEEEEESSGGGGTTCSSSCG
T ss_pred EEEEEECCcHHHHHHHHHH-----hC--------------------------cccCCcCceEEEEECCHHHHHHHhcCCC
Confidence 7789999999999998843 00 0145788999999999999988865542
Q ss_pred cccCCcccc-ccCCccccCccCccccccc-----hh--HHHHHHHHHHhhhh---hccCCCceeeEeecCCCccccchhH
Q psy2780 84 RQLFHPEQL-ISGKEDAANNYARGHYTIG-----KE--IIDLVLDRVRKLAD---QCTGLQGFLIFHSFGGGTGSGFTSL 152 (451)
Q Consensus 84 ~~~~~~~~~-~~~~~gsgnnwa~G~~~~g-----~~--~~~~~~d~ir~~~E---~cD~lqgf~i~~sl~GGtGSGlgs~ 152 (451)
++.+ +.++.|+|+||+.|++..| .+ +.+++++.||+.+| .||.+|+|+|++|+|||||||+|+.
T Consensus 94 -----~~~i~l~G~~GAG~np~~G~~~ag~~~~~~e~~~~d~I~~~I~~~~e~~~~cd~~d~f~I~aglGGGTGSG~gp~ 168 (427)
T 3m89_A 94 -----EDRIHFDGLKGAARTPSVVTDLFDPETNPNANGYLDKLAQELGRKFTNEEGEVIVDQFLICLGAGGGVGTGWGSL 168 (427)
T ss_dssp -----GGEEEC-----------CHHHHHSSSSSTTHHHHHHHHHHHHHHHSBCTTSCBCCSEEEEEEETTSHHHHHHHHH
T ss_pred -----cceEEecCCCCCCCCHHHHHHHhhcccCcccchHHHHHHHHHHHHhhccccCCCCCEEEEeeecCCCccccHHHH
Confidence 3444 5688999999999998874 54 49999999999999 8899999999999999999999999
Q ss_pred HHHHhhhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhh---cc------------ccceeEEecchhHHhhhhccC
Q psy2780 153 LMERISVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTT---LE------------HSDCAFMADNEAIYDICRRNL 217 (451)
Q Consensus 153 lle~l~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l---~e------------~sd~~i~~~N~~l~~~~~~~l 217 (451)
|++.++++|+++.+++++++|+.. + .++||++++++.| .+ ++|.+|++||++|.+++.+..
T Consensus 169 la~~lke~~~~~~~~~vvt~P~~~--e--~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~~ 244 (427)
T 3m89_A 169 VLQLIREQFFPCPVSMLISLPSGD--P--DEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQK 244 (427)
T ss_dssp HHHHHHTTCSSSCEEEEEEECCSC--H--HHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHSS
T ss_pred HHHHHHHhcCCCcEEEEEEECCCC--c--cHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhcc
Confidence 999999999999999999999843 2 3569999999997 44 999999999999887775433
Q ss_pred C--CC---CCChh-hhhHHHHHhhhcCcccc-c-cCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHH
Q psy2780 218 D--IE---RPTYT-NLNRLISQIVSSITASL-R-FDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVA 289 (451)
Q Consensus 218 ~--~~---~~~~~-~~N~~ia~~i~~~t~~~-r-~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~ 289 (451)
. .. +++|+ .+|++|+++|.+++... + +||.+|+|+.++.++|.|.|+ |++.++++...... -+..
T Consensus 245 ~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G--~a~iG~a~~~~~d~-----~~~~ 317 (427)
T 3m89_A 245 GTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGR--FLTIGKARIAKFDL-----HSLE 317 (427)
T ss_dssp CSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCS--EEEEEEEEECSCSH-----HHHH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCC--eEEEEEecccccch-----hhHH
Confidence 2 12 34999 89999999999998754 4 799999999999999999998 66778877653321 2355
Q ss_pred HHHHhhcCCCCCccccCCCCCceeeeeccccccCCh
Q psy2780 290 EITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVP 325 (451)
Q Consensus 290 ~l~~~~~~~~n~~~~~~~~~~~~ls~~~~~RG~~~~ 325 (451)
..++..|++.+.+..+++..+++++++++..-+...
T Consensus 318 ~ai~~al~~~~Ll~~~d~~~Ak~~lv~i~g~~~~~~ 353 (427)
T 3m89_A 318 NSIKRSLDEGFFSAEHQFETATMYGGFVLRPSNADF 353 (427)
T ss_dssp HHHHHHHHSSTTCSCCCGGGCCEEEEEEEEESSCGG
T ss_pred HHHHHHHhCCCcccccCcccccEEEEEEEeCchhhh
Confidence 677888888888888888889999998887655433
No 14
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=99.97 E-value=7e-31 Score=260.47 Aligned_cols=266 Identities=13% Similarity=0.194 Sum_probs=200.6
Q ss_pred EEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCccccccccccc
Q psy2780 4 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 83 (451)
Q Consensus 4 iitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~~~ 83 (451)
|..|.+|++|+.+-.+..+. ++. . ...|.+++|.+.+..+.
T Consensus 20 IkVIGVGG~G~NaVn~m~~~-----~~~------------------g------------vefiaiNTD~qaL~~s~---- 60 (396)
T 4dxd_A 20 LKVIGVGGGGNNAVNRMIDH-----GMN------------------N------------VEFIAINTDGQALNLSK---- 60 (396)
T ss_dssp EEEEEEHHHHHHHHHHHHHH-----CCC------------------S------------EEEEEEESCHHHHHTCC----
T ss_pred EEEEEECCcHHHHHHHHHHh-----CCC------------------C------------ceEEEEECCHHHHhcCC----
Confidence 77899999999998887652 110 0 12388999887765442
Q ss_pred cccCCccccccCC-----ccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhh
Q psy2780 84 RQLFHPEQLISGK-----EDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERIS 158 (451)
Q Consensus 84 ~~~~~~~~~~~~~-----~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~ 158 (451)
.++.+..++ .|+|+||+.| ++..++.+|+||+.+|.|| +|+|+||+|||||||+++.|++ ++
T Consensus 61 ----a~~ki~lG~~~t~GlGAG~np~vG-----~eaaee~~d~Ir~~le~~D---~ffItagmGGGTGSGaapvIae-ia 127 (396)
T 4dxd_A 61 ----AESKIQIGEKLTRGLGAGANPEIG-----KKAAEESREQIEDAIQGAD---MVFVTSGMGGGTGTGAAPVVAK-IA 127 (396)
T ss_dssp ----CSEEEECCHHHHTTSCCTTCHHHH-----HHHHHHTHHHHHHHHTTCS---EEEEEEETTSSHHHHHHHHHHH-HH
T ss_pred ----CccEEEcCccccCCCCCCCChHHH-----HHHHHHHHHHHHHHHcCCC---EEEEEeccCCCccccHHHHHHH-HH
Confidence 122333333 5899998864 7899999999999999999 4899999999999999998766 55
Q ss_pred hhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhcC
Q psy2780 159 VDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI 238 (451)
Q Consensus 159 d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~ 238 (451)
.+|+ +++++|+|.+...|..+++||++++++.|.+++|++|++||++|+++|.+.+.+.. +|+.+|++|+++++++
T Consensus 128 ke~g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l~i~~-af~~aN~ll~q~VsgI 203 (396)
T 4dxd_A 128 KEMG---ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKSTPMME-AFKEADNVLRQGVQGI 203 (396)
T ss_dssp HHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTCCHHH-HHHHHHHHHHHHHHHH
T ss_pred HhcC---CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccccHHH-HHHHHHHHHHHHHHhh
Confidence 6675 46677766555678899999999999999999999999999999999988888865 9999999999999999
Q ss_pred ccccccCCCCcccccccccCCccCCccccccccccccCchhhhcccccCHHHHHHhhcCCCCCccccCCCCCceeeeecc
Q psy2780 239 TASLRFDGALNVDLTEFQTNLVPFPRVHFPLVTYAPIVSAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCML 318 (451)
Q Consensus 239 t~~~r~~~~~~~~l~~~~~~L~p~p~~~f~~~s~~pl~~~~~~~~~~~~~~~l~~~~~~~~n~~~~~~~~~~~~ls~~~~ 318 (451)
|.++||||.+|.|+.++.++|.+. ...++..+.++-... ..+..+..+ .+.+...+....+.+...+.
T Consensus 204 T~~irfpG~iNvDfaDv~t~m~~~-G~A~mG~G~a~G~~r---------a~~A~~~Ai--~sPLL~~~i~gAkgvLvnIt 271 (396)
T 4dxd_A 204 SDLIAVSGEVNLDFADVKTIMSNQ-GSALMGIGVSSGENR---------AVEAAKKAI--SSPLLETSIVGAQGVLMNIT 271 (396)
T ss_dssp HHHHHSCCTBCCCHHHHHHHHTTC-EECEEEEEEEESTTH---------HHHHHHHHH--CCSSCSSCSTTCCEEEEEEE
T ss_pred hhhhccCCcccCCHHHHHHHhhcC-CeEEEEEEeccCCch---------HHHHHHHHH--hCccccCChhhhcceEEEEE
Confidence 999999999999999999999987 556666666553221 111222222 12222333444455555555
Q ss_pred ccccCChhhHHHHHHhhhc
Q psy2780 319 YRGDVVPKDVNSAIATIKT 337 (451)
Q Consensus 319 ~RG~~~~~~~~~~~~~~~~ 337 (451)
...+.+..++.+....++.
T Consensus 272 gg~dl~l~Ev~~~~~~i~~ 290 (396)
T 4dxd_A 272 GGESLSLFEAQEAADIVQD 290 (396)
T ss_dssp ECTTCCHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHH
Confidence 5567888888887665543
No 15
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=99.96 E-value=1.5e-30 Score=255.60 Aligned_cols=195 Identities=14% Similarity=0.214 Sum_probs=160.6
Q ss_pred EEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCccccccccccc
Q psy2780 4 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 83 (451)
Q Consensus 4 iitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~~~ 83 (451)
|..|.+|++|+.+..++.+. + .+ -..|.++++.+.+..+..-
T Consensus 7 I~VIGvGGaG~Nav~~m~~~-----~----------------------------~~---v~~iaiNTD~q~L~~~~~~-- 48 (360)
T 3v3t_A 7 IVFAPIGQGGGNIVDTLLGI-----C----------------------------GD---YNALFINTSKKDLDSLKHA-- 48 (360)
T ss_dssp EEEEEBSHHHHHHHHHHHHH-----C----------------------------TT---SEECEEESCHHHHHTCSSC--
T ss_pred EEEEEeCCcHHHHHHHHHHc-----C----------------------------CC---ceEEEEECCHHHHhhCCCC--
Confidence 78999999999999998752 0 00 2448899988877654321
Q ss_pred cccCCccccccCCccccCccCccccccchhHHHHHH-HHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcC
Q psy2780 84 RQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVL-DRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYG 162 (451)
Q Consensus 84 ~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~-d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~ 162 (451)
+.+-++....|+|+||..| ++..++.. |.||+.+|+|+.+|||+++||+|||||||+|+.|++.|+++||
T Consensus 49 ----~~ki~ig~GlGAG~np~vG-----~eaaee~~~d~Ir~~le~c~g~dgffI~aslGGGTGSG~~pvLae~lke~~~ 119 (360)
T 3v3t_A 49 ----KHTYHIPYAEGCGKERKKA-----VGYAQTYYKQIIAQIMEKFSSCDIVIFVATMAGGAGSGITPPILGLAKQMYP 119 (360)
T ss_dssp ----SCEEECC------CCHHHH-----HHHHGGGHHHHHHHHHHHTTTCSEEEEEEETTSHHHHHHHHHHHHHHHHHCT
T ss_pred ----ccEEEcCCCCCCCCCHHHH-----HHHHHHhHHHHHHHHHhcCCCCCeEEEeeccCCCccccHHHHHHHHHHHhCC
Confidence 1122233457899998875 68888888 9999999999999999999999999999999999999999999
Q ss_pred CcceeEEEEecCCCCCCccchhhHHHHhhhhhcc---cccee--EEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhc
Q psy2780 163 KKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLE---HSDCA--FMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSS 237 (451)
Q Consensus 163 ~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e---~sd~~--i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~ 237 (451)
++++..++|+|++. +.++++||+++++++|.+ ++|.+ +++||++ .++|.++|++|++++++
T Consensus 120 ~k~v~~vtV~Pf~~--Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea------------~~ay~~lN~lIaq~vs~ 185 (360)
T 3v3t_A 120 NKHFGFVGVLPKAT--EDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNK------------REKESDINKEFATLFND 185 (360)
T ss_dssp TSEEEEEEEECCTT--SCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGG------------SSSHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEeCCCc--cchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCC------------chhHHHHHHHHHHHHHH
Confidence 99999999999854 679999999999999999 55555 9999997 57899999999999999
Q ss_pred CccccccCCCCcccccccccCC
Q psy2780 238 ITASLRFDGALNVDLTEFQTNL 259 (451)
Q Consensus 238 ~t~~~r~~~~~~~~l~~~~~~L 259 (451)
+|..+|+||.+|+|+.++.+-+
T Consensus 186 lt~~l~~~G~iNVDfaDv~tvm 207 (360)
T 3v3t_A 186 FMNMSESHAEGVVDEDEISKLL 207 (360)
T ss_dssp HHGGGSCCSSCCCCHHHHHHHH
T ss_pred HHHhhccCCceeeeHHHHHHHH
Confidence 9999999999999999985544
No 16
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=99.74 E-value=1.5e-18 Score=175.10 Aligned_cols=217 Identities=16% Similarity=0.141 Sum_probs=150.0
Q ss_pred EEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCccccccccccc
Q psy2780 4 CISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 83 (451)
Q Consensus 4 iitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~~~ 83 (451)
|..|.+||||+.|-+.|... .. ..+...+..++|.|+++.+.+..+...
T Consensus 18 i~vIGvGgaG~~ivd~~~~~-----~~------------------------~~~~~~~~~~~iaiNTd~~~L~~~~~~-- 66 (389)
T 4ei7_A 18 FGFLGLGMGGCAIAAECANK-----ET------------------------QIKNNKYPYRAILVNTNSQDFNKIEIK-- 66 (389)
T ss_dssp EEEEEEHHHHHHHHHHHHTC-----CC------------------------CCTTCSCCCEEEEEECCCHHHHHSCCC--
T ss_pred EEEEEECCchHHHHHHHHhc-----cc------------------------ccccccccccEEEEECCHHHHhhccCc--
Confidence 67899999999999998641 00 011223446899999999887655221
Q ss_pred cccCCcccccc-CC-ccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhc
Q psy2780 84 RQLFHPEQLIS-GK-EDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDY 161 (451)
Q Consensus 84 ~~~~~~~~~~~-~~-~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y 161 (451)
........+. +. .|+|.||..|+ ...++..+++.+.|+..++.+| .++|++++|||||+|.++.+++.+++.
T Consensus 67 -~~~~~g~~~~~g~g~GaG~~p~~G~-~aa~e~~~~i~~~l~~~~~~~d---~vfi~ag~GGGTGtGa~pvia~~~ke~- 140 (389)
T 4ei7_A 67 -NTGNVRKIQLEGYEQGAARNPQVGE-EAFVKHETKIFEAVKQEFEDRD---FIWITCGLGGGTGTGALLKAIEMLYEH- 140 (389)
T ss_dssp -SCSSEEEEECTTCCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHTTTCS---EEEEEEETTSSHHHHHHHHHHHHHHHT-
T ss_pred -chhhhhhhccCCCCCCCCCChHHHH-HHHHHHHHHHHHHHHhhcCCcc---EEEEEecCCCCCccccHHHHHHHHHHc-
Confidence 1122222222 22 48999988773 3344556666666766666666 459999999999999999999999985
Q ss_pred CCcceeEEEEecCCCCCCccchhhHHHHhhhhh---ccccceeEEecchhHHhhhhcc---CCCCCCChhhhhHHHHHhh
Q psy2780 162 GKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTT---LEHSDCAFMADNEAIYDICRRN---LDIERPTYTNLNRLISQIV 235 (451)
Q Consensus 162 ~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l---~e~sd~~i~~~N~~l~~~~~~~---l~~~~~~~~~~N~~ia~~i 235 (451)
......++++|+. .|...+..|+.-++..| .+.+|.+|++||+.|.++.... +.+ ...|+.+|.+|++.+
T Consensus 141 -~~~~~~vvt~Pf~--~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~~~~~~~~~-~~af~~an~~l~~~v 216 (389)
T 4ei7_A 141 -DYNFGLLLTLPRD--AEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFEEENPSALA-NEYTSYSNKYIADAL 216 (389)
T ss_dssp -TCCEEEEEEECCG--GGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHHHHCTTCCG-GGHHHHHHHHHHHHH
T ss_pred -CCCEEEEEEeCCC--cCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHhhcCCCCCH-HHHHHHHHHHHHHHH
Confidence 3567778889983 34444444555444444 6789999999999999887542 222 236889999999987
Q ss_pred hcCccccc---cCCCCcccccccccCCcc
Q psy2780 236 SSITASLR---FDGALNVDLTEFQTNLVP 261 (451)
Q Consensus 236 ~~~t~~~r---~~~~~~~~l~~~~~~L~p 261 (451)
..++.... .+|.+|+|+.++.+-|-.
T Consensus 217 ~~i~~~~~~~~~~g~in~D~aDv~~vm~~ 245 (389)
T 4ei7_A 217 HEINLVTSSFTPFSDTHFDASEFAQVINT 245 (389)
T ss_dssp HHHHHHTTSSEESSSCCCCHHHHHHHHTS
T ss_pred HHHHHHHhCCCCCCeEEeeHHHHHHHhcC
Confidence 66643332 358899999998876543
No 17
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=99.22 E-value=8.3e-12 Score=118.24 Aligned_cols=171 Identities=16% Similarity=0.213 Sum_probs=119.0
Q ss_pred eEEEEecCchhhHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCccceeeeCCCCccccceeEeCCCCcccccccccc
Q psy2780 3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKMIGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 82 (451)
Q Consensus 3 Eiitiq~Gq~Gn~IG~~~w~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~F~e~~~~~~~pR~lliD~e~~~i~~~~~~~ 82 (451)
.|..+.+|++|+.|.+.+++. + +.++.||++.+-+...+ .
T Consensus 4 ki~VvGvGGAG~Nii~rL~~~-----------------------------------G---a~~iAiNTD~q~L~~~k--~ 43 (315)
T 3r4v_A 4 KVCLIFAGGTGMNVATKLVDL-----------------------------------G---EAVHCFDTCDKNVVDVH--R 43 (315)
T ss_dssp SCEEEEEHHHHHHHHGGGGGG-----------------------------------G---GGEEEEESSSTTCCGGG--G
T ss_pred eEEEEEEcCcchHHHHHHHHc-----------------------------------C---CCEEEEECchHHhhhhh--h
Confidence 466788999999999776541 0 45688888877653221 1
Q ss_pred ccccCCccccccCCccccCccCccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcC
Q psy2780 83 YRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYG 162 (451)
Q Consensus 83 ~~~~~~~~~~~~~~~gsgnnwa~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~ 162 (451)
.....+..+..|+|.+ ...|++..++-.+.|++.++.+|-+ +|+.++|||||+|.++.+++.+++.
T Consensus 44 ----~~~~~i~~gglGAGgd-----pe~g~e~a~e~~~eI~~~l~~aD~V---FVtaGLGGGTGTGaAPVvAeiake~-- 109 (315)
T 3r4v_A 44 ----SVNVTLTKGTRGAGGN-----RKVILPLVRPQIPALMDTIPEADFY---IVCYSLGGGSGSVLGPLITGQLADR-- 109 (315)
T ss_dssp ----GSEEEECTTCCC---C-----HHHHHHHHGGGHHHHHHTSCCBSCE---EEEEESSSSSHHHHHHHHHHHHHHT--
T ss_pred ----hcceeeecccCCCCCC-----hHHHHHHHHhhHHHHHHhcCCCCEE---EEEeccCCccccchHHHHHHHHHHc--
Confidence 1111223344566654 5667777777777888888876654 9999999999999999999999997
Q ss_pred CcceeEEEEecCCCCCCccchhhH---HHHhhhhhccccceeEEecchhHHhhhhccCCCCCCChhhhhHHHHHhhhcCc
Q psy2780 163 KKSKLQYAIYPAPQVSTSVVEPYN---SVLTTHTTLEHSDCAFMADNEAIYDICRRNLDIERPTYTNLNRLISQIVSSIT 239 (451)
Q Consensus 163 ~~~i~~~~v~P~~~~~~~~~~~yN---~~lsl~~l~e~sd~~i~~~N~~l~~~~~~~l~~~~~~~~~~N~~ia~~i~~~t 239 (451)
...++++++.|. +..+..-| |+-+|..|.+.+|.+|+|+ +.. ..+...++.+|+.++..|..+.
T Consensus 110 GalvVavVt~~~----E~~~~~~Nai~al~~LE~La~~~dt~Iv~d---~Le------n~~~lp~~~lN~eia~rL~al~ 176 (315)
T 3r4v_A 110 KASFVSFVVGAM----ESTDNLGNDIDTMKTLEAIAVNKHLPIVVN---YVP------NTQGRSYESINDEIAEKIRKVV 176 (315)
T ss_dssp TCCEEEEEEECC----SSHHHHHHHHHHHHHHHHHHHHHTSCEEEE---EEE------CCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCC----CcchhhhchHHHHHHHHHHHhccCCcEEEe---ccc------cCCCCchHHHHHHHHHHHHHHH
Confidence 235777788774 22233445 6778999999999999998 211 1235577999999999887665
Q ss_pred c
Q psy2780 240 A 240 (451)
Q Consensus 240 ~ 240 (451)
.
T Consensus 177 ~ 177 (315)
T 3r4v_A 177 L 177 (315)
T ss_dssp H
T ss_pred H
Confidence 4
No 18
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=96.98 E-value=0.00059 Score=44.16 Aligned_cols=26 Identities=73% Similarity=1.089 Sum_probs=22.5
Q ss_pred chHHHHHHHHHHHHHHHHHhccccCC
Q psy2780 416 GEFSEAREDLGALEKDYEEMGEEAGE 441 (451)
Q Consensus 416 ~eF~Ea~~~l~~l~~~Y~~~~~~~~~ 441 (451)
++|.||+++|.+|+.+|+++.....+
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e 26 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVE 26 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhccccc
Confidence 58999999999999999999766543
No 19
>3bed_A PTS system, IIA component; mannose/sorbose, phosphotransferase system, structural genom APC28805, PSI-2, protein structure initiative; HET: MSE MLY; 1.45A {Enterococcus faecalis} SCOP: c.54.1.1
Probab=55.90 E-value=6 Score=33.24 Aligned_cols=36 Identities=11% Similarity=0.212 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhhhhccCCCceeeEeecCCCccccchh
Q psy2780 115 IDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTS 151 (451)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs 151 (451)
.+.+.++++..+++.|. +|++|+.++-|||-.-.+.
T Consensus 45 ~~~~~~~i~~~i~~~~~-~gvliLtDl~GGSp~n~a~ 80 (142)
T 3bed_A 45 LSGTQAKLAAILKEAGN-VPTLVLADLXGGTPCNVAM 80 (142)
T ss_dssp HHHHHHHHHHHHHHHCS-CCEEEEESSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECCCCHHHHHHH
Confidence 35677888888889998 9999999999998655533
No 20
>3lfh_A Manxa, phosphotransferase system, mannose/fructose-speci component IIA; PTS; 1.80A {Thermoanaerobacter tengcongensis} SCOP: c.54.1.0
Probab=55.14 E-value=8.5 Score=32.52 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhhhhc-cCCCceeeEeecCCCccccchhHH
Q psy2780 115 IDLVLDRVRKLADQC-TGLQGFLIFHSFGGGTGSGFTSLL 153 (451)
Q Consensus 115 ~~~~~d~ir~~~E~c-D~lqgf~i~~sl~GGtGSGlgs~l 153 (451)
.+++.++++..+++. |.-+|++|+.++-|||-.-.+..+
T Consensus 43 ~~~~~~~i~~~i~~~~~~~~gvliLtDl~GGSp~n~a~~l 82 (144)
T 3lfh_A 43 IEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSM 82 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEESSSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCCHHHHHHHH
Confidence 356677777777788 778899999999999887766655
No 21
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=52.32 E-value=16 Score=30.16 Aligned_cols=40 Identities=18% Similarity=0.457 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHH
Q psy2780 115 IDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMER 156 (451)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~ 156 (451)
.+++.+++++.+++.|.-+|++++.++ ||-+-++..+.+.
T Consensus 44 ~~~~~~~i~~~i~~~d~~~GVLiL~Dm--GSp~n~a~~l~~~ 83 (130)
T 3gx1_A 44 VKAMYEKLKQTVVKLNPVKGVLILSDM--GSLTSFGNILTEE 83 (130)
T ss_dssp HHHHHHHHHHHHHTSCCTTCEEEEECS--GGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCEEEEEeC--CCHHHHHHHHHHh
Confidence 467888888889999999999999999 7776766655443
No 22
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Probab=50.20 E-value=9.5 Score=35.95 Aligned_cols=79 Identities=14% Similarity=0.183 Sum_probs=45.1
Q ss_pred ccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcCCcceeEEEEecCCCCCCc-cch
Q psy2780 105 RGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYGKKSKLQYAIYPAPQVSTS-VVE 183 (451)
Q Consensus 105 ~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~~~~i~~~~v~P~~~~~~~-~~~ 183 (451)
+|++..-..+.+.+.+.|++.+++.....=++.-|||||+ ++..+.-.|+..+|...+ .+..+-.+..++. ..+
T Consensus 111 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~l~vtGHSLGGa----lA~l~a~~l~~~~~~~~~-~~~tfg~PrvGn~~fa~ 185 (279)
T 3uue_A 111 HGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAA----MGLLCAMDIELRMDGGLY-KTYLFGLPRLGNPTFAS 185 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEETHHHH----HHHHHHHHHHHHSTTCCS-EEEEESCCCCBCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEcccCHHHH----HHHHHHHHHHHhCCCCce-EEEEecCCCcCCHHHHH
Confidence 3444433556677777888877776555445556899654 667777777777765433 3333333333332 333
Q ss_pred hhHHH
Q psy2780 184 PYNSV 188 (451)
Q Consensus 184 ~yN~~ 188 (451)
.++..
T Consensus 186 ~~~~~ 190 (279)
T 3uue_A 186 FVDQK 190 (279)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 44444
No 23
>1pdo_A Mannose permease; phosphoenolpyruvate dependent phosphotransferase system, phosphotransferase; 1.70A {Escherichia coli} SCOP: c.54.1.1 PDB: 1vrc_A 1vsq_A* 2jzo_A 2jzn_A
Probab=50.06 E-value=12 Score=31.10 Aligned_cols=39 Identities=13% Similarity=0.200 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHH
Q psy2780 115 IDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLL 153 (451)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~l 153 (451)
.+++.++++..+++.|.-+|++|+.++-|||-.-.+..+
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvliLtDl~GGSp~n~a~~~ 79 (135)
T 1pdo_A 41 AETLIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRI 79 (135)
T ss_dssp HHHHHHHHHHHHTTSCCTTCEEEEESSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEECCCCCHHHHHHHH
Confidence 346778888888888888899999999999865554433
No 24
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium expansum}
Probab=48.92 E-value=9 Score=35.69 Aligned_cols=58 Identities=22% Similarity=0.286 Sum_probs=38.8
Q ss_pred ccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcCCcce
Q psy2780 105 RGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYGKKSK 166 (451)
Q Consensus 105 ~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~~~~i 166 (451)
+|++..-+.+.+.+.+.|++.+++.....=++.=||||| +++..+.-.|+..+|...+
T Consensus 97 ~GF~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~~v 154 (258)
T 3g7n_A 97 RGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGG----ALTSIAHVALAQNFPDKSL 154 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEETHHH----HHHHHHHHHHHHHCTTSCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeccCHHH----HHHHHHHHHHHHhCCCCce
Confidence 344443346667778888888777655544555689976 4677777778888887554
No 25
>3ipr_A PTS system, IIA component; stranded parallel beta-sheet flanked by 3 alpha-helices on EACH SIDE, transferase; 2.50A {Enterococcus faecalis} SCOP: c.54.1.0
Probab=44.36 E-value=16 Score=30.96 Aligned_cols=41 Identities=7% Similarity=0.178 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHH
Q psy2780 115 IDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLME 155 (451)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle 155 (451)
.+.+.++++..+++.|.-+|++|+.++-|||-.-.+..++.
T Consensus 41 ~~~~~~~i~~~i~~~~~~~gvlvLtDl~GGSp~n~a~~~~~ 81 (150)
T 3ipr_A 41 VQALGGQIKTAIENVQQGDGVLVMVDLLSASPYNQAVLVIN 81 (150)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEEESSTTSHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHH
Confidence 35567777888888888889999999999987666555543
No 26
>3gdw_A Sigma-54 interaction domain protein; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=42.14 E-value=25 Score=29.43 Aligned_cols=40 Identities=18% Similarity=0.374 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhhhh--ccCCCceeeEeecCCCccccchhHHHHH
Q psy2780 115 IDLVLDRVRKLADQ--CTGLQGFLIFHSFGGGTGSGFTSLLMER 156 (451)
Q Consensus 115 ~~~~~d~ir~~~E~--cD~lqgf~i~~sl~GGtGSGlgs~lle~ 156 (451)
.+++.++++..+++ .|.-+|++++.++ ||-+-++..+.+.
T Consensus 44 ~~~~~~~i~~~i~~~~~d~g~GVLiL~Dm--GSp~n~a~~l~~~ 85 (139)
T 3gdw_A 44 VQTMYEQLRNQVITQKESLNNGILLLTDM--GSLNSFGNMLFEE 85 (139)
T ss_dssp HHHHHHHHHHHHHTSTGGGTTCEEEEECS--GGGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCCCEEEEEeC--CCHHHHHHHHHHh
Confidence 46778888888888 7788999999999 7776766655443
No 27
>3mtq_A Putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease...; PTS system fructose IIA component; 1.70A {Klebsiella pneumoniae subsp}
Probab=40.95 E-value=7.5 Score=33.49 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=29.8
Q ss_pred HHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHH
Q psy2780 116 DLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLL 153 (451)
Q Consensus 116 ~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~l 153 (451)
+++.++++..+++.|.-+|++|+.++-|||-+-.+..+
T Consensus 61 ~~~~~~~~~~i~~~~~~~gVLiLtDl~GGSP~n~a~~~ 98 (159)
T 3mtq_A 61 VDLTQQVEALVARFPAQDELIVITDIFAGSVNNEFVRF 98 (159)
T ss_dssp SCHHHHHHHHHHTSCTTSEEEEEESCTTSHHHHHHHGG
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 35667788888888888999999999999876554443
No 28
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=33.40 E-value=25 Score=27.37 Aligned_cols=52 Identities=21% Similarity=0.425 Sum_probs=37.2
Q ss_pred ccCCchHHHHHHHH-------HHHHHHHhhcccceeccccCCCC--cchHHHHHHHHHHHHHHHHH
Q psy2780 378 LSNTTAIAEAWGRL-------DHKFDLMYAKRAFIHWYVGEGME--EGEFSEAREDLGALEKDYEE 434 (451)
Q Consensus 378 l~Nst~i~~~l~~l-------~~~~~~~~~rkAflH~Y~~~Gme--e~eF~Ea~~~l~~l~~~Y~~ 434 (451)
++|.++|...|..| ++....+--+|.|. ||+. -....||+..|..+.+++++
T Consensus 30 i~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~y-----E~LQDkL~qi~eAR~ALdaLR~eH~~ 90 (98)
T 3f1i_H 30 ITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYY-----EGLQDKLAQIRDARGALSALREEHRE 90 (98)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55777777766654 55566666667443 5664 36799999999999999974
No 29
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids binding, glycosylation, extracellular, hydrolase; HET: NAG; 1.70A {Yarrowia lipolytica} SCOP: c.69.1.0
Probab=30.87 E-value=23 Score=33.72 Aligned_cols=55 Identities=16% Similarity=0.150 Sum_probs=33.6
Q ss_pred cccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcCCc
Q psy2780 106 GHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYGKK 164 (451)
Q Consensus 106 G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~~~ 164 (451)
|++..-+.+.+.+.+.|++.+++.....=++.-||||| +++..++-.|+...++.
T Consensus 128 GF~~~~~~~~~~i~~~l~~~~~~~p~~~i~vtGHSLGG----alA~l~a~~l~~~~~~~ 182 (301)
T 3o0d_A 128 GFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGG----AAALLFGINLKVNGHDP 182 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHH----HHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCceEEEeccChHH----HHHHHHHHHHHhcCCCc
Confidence 44433345566777778877776554444455589965 46666666677665443
No 30
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=30.43 E-value=19 Score=33.99 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHH
Q psy2780 115 IDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMER 156 (451)
Q Consensus 115 ~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~ 156 (451)
.+++++++|+.+++=..+ +++|.|+|++++..|.
T Consensus 13 r~~il~~l~~~i~~~~~i--------ig~gaGtGlsAk~~e~ 46 (286)
T 2p10_A 13 RSELVDRFQKKIRAGEPI--------IGGGAGTGLSAKSEEA 46 (286)
T ss_dssp HHHHHHHHHHHHHTTCCE--------EEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCce--------EEEecccchhhHHHHh
Confidence 467889999888876655 6778899998887665
No 31
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium camemberti} SCOP: c.69.1.17
Probab=29.41 E-value=30 Score=32.32 Aligned_cols=53 Identities=15% Similarity=0.253 Sum_probs=34.0
Q ss_pred CccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhh
Q psy2780 104 ARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVD 160 (451)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~ 160 (451)
.+|++..-..+.+.+.+.|++..++.....=++.=|||||+ ++..++-.++..
T Consensus 109 h~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~~ 161 (279)
T 1tia_A 109 ELGFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAA----VATLAATDLRGK 161 (279)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCHHHH----HHHHHHHHHHhc
Confidence 45655544556677777788777766555556667899765 555665566543
No 32
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation; HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17 PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Probab=26.75 E-value=27 Score=32.28 Aligned_cols=51 Identities=24% Similarity=0.221 Sum_probs=31.9
Q ss_pred ccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhh
Q psy2780 105 RGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISV 159 (451)
Q Consensus 105 ~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d 159 (451)
+|++..-..+.+.+.+.|++..++.....=++.=|||||+ ++..+.-.|+.
T Consensus 98 ~Gf~~~~~~~~~~~~~~l~~~~~~~p~~~i~vtGHSLGGa----lA~l~a~~l~~ 148 (261)
T 1uwc_A 98 GGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGAS----MAALTAAQLSA 148 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHH----HHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHCCCceEEEEecCHHHH----HHHHHHHHHhc
Confidence 3444333456677777788777776555545666899764 56666666663
No 33
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella zeae}
Probab=26.75 E-value=30 Score=33.23 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=33.1
Q ss_pred ccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcC
Q psy2780 105 RGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYG 162 (451)
Q Consensus 105 ~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~ 162 (451)
+|++..-..+.+.+.+.|++.+++.....=++.-|||||+ ++..+.-.|+...+
T Consensus 109 ~GF~~a~~~i~~~l~~~l~~~~~~~p~~~i~vtGHSLGGA----lA~L~a~~l~~~~~ 162 (319)
T 3ngm_A 109 SGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGGA----VATLAGANLRIGGT 162 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSTTCEEEEEEETHHHH----HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCceEEeecCHHHH----HHHHHHHHHHhcCC
Confidence 4544434456667777777777765555445566899764 56666666665533
No 34
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=24.50 E-value=2.1e+02 Score=24.66 Aligned_cols=93 Identities=12% Similarity=0.069 Sum_probs=48.0
Q ss_pred ce-eeEeecCCCccccchhHHHHHhhhhcCCcceeEEEEecCCCCCCccchhhHHHHhhhhhccccceeEEecchhHHhh
Q psy2780 134 GF-LIFHSFGGGTGSGFTSLLMERISVDYGKKSKLQYAIYPAPQVSTSVVEPYNSVLTTHTTLEHSDCAFMADNEAIYDI 212 (451)
Q Consensus 134 gf-~i~~sl~GGtGSGlgs~lle~l~d~y~~~~i~~~~v~P~~~~~~~~~~~yN~~lsl~~l~e~sd~~i~~~N~~l~~~ 212 (451)
|+ -++.+.+.|.- -++..++-.|+.+||...+ .+|+|+...+..- .+-|. ..+..+.+.+|.+..+.......
T Consensus 43 G~~~~isgga~G~D-~~aae~vl~lk~~y~~i~L--~~v~Pf~~~~~~w-~~~~~-~~y~~ll~~aD~v~~l~~~~y~~- 116 (181)
T 2nx2_A 43 GLEWILISGQLGVE-LWAAEAAYDLQEEYPDLKV--AVITPFYEQEKNW-KEPNK-EQYEAVLAQADYEASLTHRPYES- 116 (181)
T ss_dssp TCCEEEECCCTTHH-HHHHHHHHTTTTTCTTCEE--EEEESSBCTTTTS-CHHHH-HHHHHHHHHCSEEEESSSSBCCC-
T ss_pred CCcEEEECCCccHH-HHHHHHHHHhccccCCceE--EEEecccchhhCC-CHHHH-HHHHHHHHhCCeEEecccCCCCC-
Confidence 53 34444444432 3345555556778985543 4678985443322 22232 34666777788888765432100
Q ss_pred hhccCCCCCCChhhhhHHHHHhhhcCcc
Q psy2780 213 CRRNLDIERPTYTNLNRLISQIVSSITA 240 (451)
Q Consensus 213 ~~~~l~~~~~~~~~~N~~ia~~i~~~t~ 240 (451)
...|..-|+.+...-..+.+
T Consensus 117 --------~~~~~~rn~~mvd~sD~lia 136 (181)
T 2nx2_A 117 --------PLQFKQKNQFFIDKSDGLLL 136 (181)
T ss_dssp --------HHHHHHHHHHHHHHSSEEEE
T ss_pred --------HHHHHHHHHHHHHHCCEEEE
Confidence 01355667766665444443
No 35
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=23.47 E-value=1.2e+02 Score=29.04 Aligned_cols=97 Identities=18% Similarity=0.222 Sum_probs=56.3
Q ss_pred cchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcCCcceeEEEEecCCC-CCCccchhhHHH
Q psy2780 110 IGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYGKKSKLQYAIYPAPQ-VSTSVVEPYNSV 188 (451)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~~~~i~~~~v~P~~~-~~~~~~~~yN~~ 188 (451)
+..+.+.++.+.|++.+++ +..+||+|+|+.. |= --++..+..+-+ .++..+++=+..|... .++.....++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (332)
T 2wlt_A 65 MNEEIWFKLAQRAQELLDD-SRIQGVVITHGTD--TL-EESAYFLNLVLH-STKPVVLVGAMRNASSLSADGALNLYEAV 139 (332)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCSS--SH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--hH-HHHHHHHHHHhC-CCCCEEEECCCCCCCCCCcchHHHHHHHH
Confidence 3456777777888776653 4688999999664 32 445666665544 4555566666777654 345555556666
Q ss_pred HhhhhhccccceeEEecchhHHh
Q psy2780 189 LTTHTTLEHSDCAFMADNEAIYD 211 (451)
Q Consensus 189 lsl~~l~e~sd~~i~~~N~~l~~ 211 (451)
..-..-...--.++++=|+.+++
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (332)
T 2wlt_A 140 SVAVNEKSANKGVLVVMDDTIFS 162 (332)
T ss_dssp HHHHCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 43322111112455555666653
No 36
>2iu1_A EIF5, eukaryotic translation initiation factor 5; MFC, GTP-binding, phosphorylation, protein biosynthesis, translation inititation; 1.8A {Homo sapiens}
Probab=23.41 E-value=34 Score=30.70 Aligned_cols=52 Identities=12% Similarity=0.107 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHH--HhhcccceeccccCC---CCcchHHHHHHHHHHHHHHHHHh
Q psy2780 384 IAEAWGRLDHKFDL--MYAKRAFIHWYVGEG---MEEGEFSEAREDLGALEKDYEEM 435 (451)
Q Consensus 384 i~~~l~~l~~~~~~--~~~rkAflH~Y~~~G---mee~eF~Ea~~~l~~l~~~Y~~~ 435 (451)
....|-.|+..+.. +..-.|++.||.+.. ..+..-...+..+..++.==++.
T Consensus 98 ~~~~~~~IL~~LYD~DIleEEaIl~W~~~~s~~~~~~e~~k~v~~~~~pFI~WL~EA 154 (208)
T 2iu1_A 98 LISKIPHILKEMYDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWLKEA 154 (208)
T ss_dssp HGGGHHHHHHHHHHTTSSCHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHhccchhhhHHHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHcc
Confidence 33445555555544 457789999996521 12222224455555555544444
No 37
>3b48_A Uncharacterized protein; enterococcus faecalis V583, structural genomics, PSI-2, PROT structure initiative; 2.21A {Enterococcus faecalis} SCOP: c.54.1.2
Probab=23.38 E-value=30 Score=28.62 Aligned_cols=28 Identities=18% Similarity=0.277 Sum_probs=21.0
Q ss_pred HHHHHHhhhhhccCCCceeeEeecCCCcc
Q psy2780 118 VLDRVRKLADQCTGLQGFLIFHSFGGGTG 146 (451)
Q Consensus 118 ~~d~ir~~~E~cD~lqgf~i~~sl~GGtG 146 (451)
..++|+..+++.|.=+|++|+.++ |||-
T Consensus 50 ~~~~i~~ai~~~~~~dgVlvltDL-Ggsp 77 (135)
T 3b48_A 50 DPMKIIDTINEADSDREFLIFADL-GSAV 77 (135)
T ss_dssp CHHHHHHHHHHSCSSCEEEEEECS-HHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEEeC-CCCh
Confidence 345666777777777899999999 6643
No 38
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A 1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Probab=22.24 E-value=35 Score=31.64 Aligned_cols=53 Identities=13% Similarity=0.224 Sum_probs=32.7
Q ss_pred CccccccchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhh
Q psy2780 104 ARGHYTIGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVD 160 (451)
Q Consensus 104 a~G~~~~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~ 160 (451)
-+|++..-+.+.+++.+.+++..++.....=+++-||||| +++..++..++..
T Consensus 110 h~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~GHSLGG----alA~l~a~~l~~~ 162 (269)
T 1tib_A 110 HDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGG----ALATVAGADLRGN 162 (269)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEETHHH----HHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHCCCceEEEecCChHH----HHHHHHHHHHHhc
Confidence 3454443345666777777777766555555667789965 4566666666544
No 39
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=22.20 E-value=1.2e+02 Score=29.07 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=56.3
Q ss_pred cchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcCCcceeEEEEecCCC-CCCccchhhHHH
Q psy2780 110 IGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYGKKSKLQYAIYPAPQ-VSTSVVEPYNSV 188 (451)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~~~~i~~~~v~P~~~-~~~~~~~~yN~~ 188 (451)
+..+.+.++.+.|++.+++ +..+||+|+|+.. |= --++..+..+-+ .++..+++=+..|... .++.....++++
T Consensus 65 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 139 (327)
T 1o7j_A 65 MTGDVVLKLSQRVNELLAR-DDVDGVVITHGTD--TV-EESAYFLHLTVK-SDKPVVFVAAMRPATAISADGPMNLLEAV 139 (327)
T ss_dssp CCHHHHHHHHHHHHHHHTS-TTCCEEEEECCST--TH-HHHHHHHHHHCC-CCSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEecCch--hH-HHHHHHHHHHhC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 4466777778888776653 4688999999654 32 445566665544 4555566666777654 345555556666
Q ss_pred HhhhhhccccceeEEecchhHHh
Q psy2780 189 LTTHTTLEHSDCAFMADNEAIYD 211 (451)
Q Consensus 189 lsl~~l~e~sd~~i~~~N~~l~~ 211 (451)
..-..-...--.++++=|+.+++
T Consensus 140 ~~A~~~~~~~~GV~V~fn~~i~~ 162 (327)
T 1o7j_A 140 RVAGDKQSRGRGVMVVINDRIGS 162 (327)
T ss_dssp HHHHCGGGTTSCCEEEETTEEEE
T ss_pred HHHhCcCCCCCceEEEECCEEee
Confidence 43332111112455555666653
No 40
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=22.14 E-value=1.3e+02 Score=28.86 Aligned_cols=97 Identities=18% Similarity=0.160 Sum_probs=56.1
Q ss_pred cchhHHHHHHHHHHhhhhhccCCCceeeEeecCCCccccchhHHHHHhhhhcCCcceeEEEEecCCC-CCCccchhhHHH
Q psy2780 110 IGKEIIDLVLDRVRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERISVDYGKKSKLQYAIYPAPQ-VSTSVVEPYNSV 188 (451)
Q Consensus 110 ~g~~~~~~~~d~ir~~~E~cD~lqgf~i~~sl~GGtGSGlgs~lle~l~d~y~~~~i~~~~v~P~~~-~~~~~~~~yN~~ 188 (451)
+..+.+.++.+.|++.+++ +..+||+|+|+.. |= --++..+..+-+ .++..+++=+..|... .++.....++++
T Consensus 63 mt~~~w~~la~~I~~~~~~-~~~dG~VItHGTD--Tm-eeTA~~Ls~~l~-~~kPVVlTGAmrP~~~~~sDg~~NL~~Av 137 (330)
T 1wsa_A 63 MTGKVWLKLAKRVNELLAQ-KETEAVIITHGTD--TM-EETAFFLNLTVK-SQKPVVLVGAMRPGSSMSADGPMNLYNAV 137 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHS-TTCCCEEEECCSS--SH-HHHHHHHHHHCC-CSSCEEEECCSSCTTSTTCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcc-CCCCEEEEEcCcc--hH-HHHHHHHHHHcC-CCCCEEEeCCCCCCCCCCCchHHHHHHHH
Confidence 4466777788888776654 4688999999654 32 445566665544 4555566666777654 345555556666
Q ss_pred HhhhhhccccceeEEecchhHHh
Q psy2780 189 LTTHTTLEHSDCAFMADNEAIYD 211 (451)
Q Consensus 189 lsl~~l~e~sd~~i~~~N~~l~~ 211 (451)
..-..-...--.++++=|+.+++
T Consensus 138 ~~A~~~~~~~~GV~V~fn~~i~~ 160 (330)
T 1wsa_A 138 NVAINKASTNKGVVIVMNDEIHA 160 (330)
T ss_dssp HHHTCGGGTTSCSEEEETTEEEE
T ss_pred HHHhCcccCCCeEEEEECCEEee
Confidence 43322111112455555665653
No 41
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=21.84 E-value=46 Score=27.42 Aligned_cols=26 Identities=23% Similarity=0.483 Sum_probs=19.1
Q ss_pred HHHHHHhhhhhccCCCceeeEeecCCCc
Q psy2780 118 VLDRVRKLADQCTGLQGFLIFHSFGGGT 145 (451)
Q Consensus 118 ~~d~ir~~~E~cD~lqgf~i~~sl~GGt 145 (451)
..++|+..++++|. +|++|+.++ |||
T Consensus 45 ~~~~i~~ai~~~~~-dgVlvltDL-Ggs 70 (131)
T 3ct6_A 45 SFDRVMNAIEENEA-DNLLTFFDL-GSA 70 (131)
T ss_dssp CHHHHHHHHHHSSC-SEEEEEESS-GGG
T ss_pred HHHHHHHHHHhCCC-CCEEEEEeC-CCC
Confidence 34566666677773 899999999 664
No 42
>3ff5_A PEX14P, peroxisomal biogenesis factor 14; protein import, peroxin, 3 helices bundle, protein transport; HET: DPW; 1.80A {Rattus norvegicus}
Probab=21.49 E-value=25 Score=24.39 Aligned_cols=24 Identities=25% Similarity=0.480 Sum_probs=17.8
Q ss_pred HhhcccceeccccCCCCcchHHHHHHH
Q psy2780 398 MYAKRAFIHWYVGEGMEEGEFSEARED 424 (451)
Q Consensus 398 ~~~rkAflH~Y~~~Gmee~eF~Ea~~~ 424 (451)
+-+|.+|| .+-|+.++|+.+|+.+
T Consensus 30 ~~~K~~FL---~sKGLt~~EI~~Al~r 53 (54)
T 3ff5_A 30 LATRRAFL---KKKGLTDEEIDLAFQQ 53 (54)
T ss_dssp HHHHHHHH---HHTTCCHHHHHHHHHH
T ss_pred HHHHHHHH---HHcCCCHHHHHHHHHc
Confidence 34566666 3569999999999864
Done!