Query psy2782
Match_columns 147
No_of_seqs 139 out of 226
Neff 3.5
Searched_HMMs 13730
Date Fri Aug 16 16:45:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2782.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2782hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eeja2 d.17.3.1 (A:1-60) Disu 83.6 2 0.00015 26.6 6.3 43 65-118 2-51 (60)
2 d1t3ba2 d.17.3.1 (A:2-60) Disu 78.4 0.7 5.1E-05 28.8 2.7 39 69-118 5-50 (59)
3 d1kwga1 b.71.1.1 (A:591-644) A 64.1 5.6 0.00041 24.3 4.5 35 86-121 8-45 (54)
4 d2r2za1 d.145.1.4 (A:5-88) Put 51.0 2.5 0.00018 26.8 1.1 26 102-127 1-26 (84)
5 d2ep6a1 b.7.1.1 (A:92-217) Mul 37.2 11 0.00077 24.2 2.6 32 77-115 2-33 (126)
6 d2nqwa1 d.145.1.4 (A:4-90) Hyp 36.2 9.4 0.00068 24.0 2.2 25 104-128 3-27 (87)
7 d2fy8a2 d.286.1.1 (A:245-336) 35.3 6.9 0.0005 24.7 1.4 46 71-118 35-80 (92)
8 d1rj8a_ b.22.1.1 (A:) Ectodysp 33.4 16 0.0011 25.2 3.2 35 87-123 104-139 (140)
9 d1s55a1 b.22.1.1 (A:161-316) T 32.6 8.8 0.00064 26.4 1.7 36 86-123 120-155 (156)
10 d2plia1 d.145.1.4 (A:5-88) Unc 31.8 11 0.00083 23.6 2.0 27 100-127 2-28 (84)
11 d1pyya2 d.11.1.1 (A:693-750) P 31.7 41 0.003 19.5 4.6 25 63-94 10-34 (58)
12 d2qifa1 d.58.17.1 (A:1-69) Cop 31.2 44 0.0032 19.5 4.7 33 65-102 17-49 (69)
13 d2ggpb1 d.58.17.1 (B:1-72) Cop 30.6 31 0.0022 20.5 3.9 32 66-102 18-49 (72)
14 d1wexa_ d.58.7.1 (A:) Heteroge 30.6 29 0.0021 21.6 4.0 26 64-94 28-53 (104)
15 d1vqow1 d.59.1.1 (W:1-154) Arc 30.3 4.7 0.00034 28.9 -0.2 49 66-125 15-64 (154)
16 d3bypa1 d.52.9.1 (A:6-87) Puta 28.2 27 0.002 21.5 3.4 33 65-97 7-39 (82)
17 d2oaia1 d.145.1.4 (A:5-91) Hem 26.5 20 0.0015 22.4 2.6 28 100-128 2-29 (87)
18 d2bz2a1 d.58.7.1 (A:35-113) Ne 25.7 24 0.0018 20.9 2.7 25 64-93 16-40 (79)
19 d1vcta2 d.286.1.1 (A:108-201) 25.1 13 0.00095 23.3 1.4 47 70-118 30-76 (94)
20 d2p13a1 d.145.1.4 (A:431-515) 21.9 22 0.0016 22.0 2.0 21 107-127 8-28 (85)
21 d1p6ta1 d.58.17.1 (A:1-72) Pot 21.8 65 0.0047 18.7 4.2 32 65-101 21-52 (72)
22 d1so7a_ b.68.1.1 (A:) Sialidas 21.6 55 0.004 23.3 4.5 39 80-120 1-39 (374)
23 d1mwza_ d.58.17.1 (A:) Metal i 21.1 78 0.0057 18.5 4.8 30 66-100 19-48 (73)
24 d1x4ga1 d.58.7.1 (A:8-103) Nuc 20.3 76 0.0055 19.4 4.5 26 63-93 30-55 (96)
25 d1q8la_ d.58.17.1 (A:) Menkes 20.2 71 0.0051 19.4 4.3 31 66-101 25-55 (84)
No 1
>d1eeja2 d.17.3.1 (A:1-60) Disulfide bond isomerase, DsbC, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=83.55 E-value=2 Score=26.55 Aligned_cols=43 Identities=16% Similarity=0.428 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhCCe-------ecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccc
Q psy2782 65 EKKARKIMSKLGLK-------QIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEA 118 (147)
Q Consensus 65 EKKaRKaL~KLGLk-------~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEa 118 (147)
|.-.|+.|.++|++ ||+|+.+|++ +++ +| |-+ ....|+|.|+.
T Consensus 2 ea~i~~~L~~~~~~v~sV~~spi~GlyeV~~--~~~-i~-------Yvs-~dG~y~i~G~l 51 (60)
T d1eeja2 2 DAAIQQTLAKMGIKSSDIQPAPVAGMKTVLT--NSG-VL-------YIT-DDGKHIIQGPM 51 (60)
T ss_dssp HHHHHHHHHHTTCCEEEEEECSSTTEEEEEE--TTE-EE-------EEE-TTSCEEEESCE
T ss_pred HHHHHHHHHhcCCceeEEecCCCCCeEEEEE--CCE-EE-------EEc-CCCCEEEEeEE
Confidence 56678899999986 6788888877 334 33 344 36679998864
No 2
>d1t3ba2 d.17.3.1 (A:2-60) Disulfide bond isomerase, DsbC, N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=78.36 E-value=0.7 Score=28.81 Aligned_cols=39 Identities=10% Similarity=0.432 Sum_probs=26.8
Q ss_pred HHHHHHhCCe-------ecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccc
Q psy2782 69 RKIMSKLGLK-------QIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEA 118 (147)
Q Consensus 69 RKaL~KLGLk-------~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEa 118 (147)
++.|++||++ ||+|+-+|.+ +++ +| |-+ ....|+|.|..
T Consensus 5 ~~kl~~l~~~v~~i~~spi~GlyeV~~--~~g-i~-------Yvs-~dg~y~i~G~l 50 (59)
T d1t3ba2 5 KRKLQSFNISNIVIKSSPISGIKTAVT--DQG-IL-------YVS-EDGKYLFEGKL 50 (59)
T ss_dssp HHHHHTTTCCSCCCCBCSSTTEECCEE--TTE-EC-------EEE-SSSSCEECSCC
T ss_pred HHHHHHcCCeeeEEecCCCCCeEEEEE--CCE-EE-------EEc-CCCCEEEEeEE
Confidence 5667788876 6899999987 344 32 333 35678888864
No 3
>d1kwga1 b.71.1.1 (A:591-644) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]}
Probab=64.09 E-value=5.6 Score=24.35 Aligned_cols=35 Identities=14% Similarity=0.490 Sum_probs=24.6
Q ss_pred EEEEecCceEEEEeCC-eeeecC--CCCcEEEEcccccc
Q psy2782 86 VTIRKSKNILFVINKP-DVFKNP--ASDTYIVFGEAKIE 121 (147)
Q Consensus 86 VtirKskn~lfvI~~P-dVyksp--~SnTYIVFGEak~e 121 (147)
|.||+.++.+|++|-- +.+..| .+..|++ |..+++
T Consensus 8 lRvrrRG~l~fafNYg~~~~~i~~~~~a~fvl-G~~~i~ 45 (54)
T d1kwga1 8 LRLRRRGTWVFAFNYGPEAVEAPASEGARFLL-GSRRVG 45 (54)
T ss_dssp EEEEEETTEEEEEECSSSCEECCCCTTCEEEE-SCSEEC
T ss_pred eEEEEECCEEEEEecCCCcEEeeCCCCCEEEe-cccccC
Confidence 6799999999999963 344443 3445555 988765
No 4
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus faecalis [TaxId: 1351]}
Probab=50.97 E-value=2.5 Score=26.84 Aligned_cols=26 Identities=19% Similarity=0.500 Sum_probs=22.0
Q ss_pred eeeecCCCCcEEEEccccccchHHHH
Q psy2782 102 DVFKNPASDTYIVFGEAKIEDLSQQA 127 (147)
Q Consensus 102 dVyksp~SnTYIVFGEak~eDlsqqa 127 (147)
++|+-...|+|+|-|.+.++|++...
T Consensus 1 ~~~~~i~~~~~~v~G~~~l~dl~~~l 26 (84)
T d2r2za1 1 NLYTQVADNEYLVQGRMLIDEFNEVF 26 (84)
T ss_dssp CCEEEEETTEEEEETTSBHHHHHHHH
T ss_pred CceEEECCCEEEEEeeCCHHHHHHHH
Confidence 45777778999999999999998765
No 5
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.25 E-value=11 Score=24.22 Aligned_cols=32 Identities=25% Similarity=0.526 Sum_probs=21.8
Q ss_pred CeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEE
Q psy2782 77 LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVF 115 (147)
Q Consensus 77 Lk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVF 115 (147)
+++| |+-+|++.+.+|+. .-+ .+-.+|.||++
T Consensus 2 ~~~~-G~L~V~v~~A~~L~----~~d--~~g~~Dpyv~v 33 (126)
T d2ep6a1 2 VKDV-GILQVKVLKAADLL----AAD--FSGKSDPFCLL 33 (126)
T ss_dssp CCCS-EEEEEEEEEEESCC----CSS--SSSCCCEEEEE
T ss_pred CCcc-EEEEEEEEEeECCC----CCC--CCCCcCeEEEE
Confidence 5666 89999999998862 122 22346788876
No 6
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=36.19 E-value=9.4 Score=23.96 Aligned_cols=25 Identities=20% Similarity=0.429 Sum_probs=20.3
Q ss_pred eecCCCCcEEEEccccccchHHHHH
Q psy2782 104 FKNPASDTYIVFGEAKIEDLSQQAQ 128 (147)
Q Consensus 104 yksp~SnTYIVFGEak~eDlsqqaq 128 (147)
|+--+.++|+|-|.+.++|++....
T Consensus 3 ~~ki~d~~~~v~G~~~l~dl~~~l~ 27 (87)
T d2nqwa1 3 FKVLGDGSYLFEGKTSLSDVRHYLD 27 (87)
T ss_dssp EEECTTSCEEEETTCBHHHHHHHHT
T ss_pred eEEECCCEEEEEEeCCHHHHHHHhC
Confidence 4445689999999999999987653
No 7
>d2fy8a2 d.286.1.1 (A:245-336) Potassium channel-related protein MthK, C-terminal domain {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}
Probab=35.30 E-value=6.9 Score=24.71 Aligned_cols=46 Identities=13% Similarity=0.228 Sum_probs=32.5
Q ss_pred HHHHhCCeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccc
Q psy2782 71 IMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEA 118 (147)
Q Consensus 71 aL~KLGLk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEa 118 (147)
.|.-++|..-.|+.=+-|++.++. +....|+.- --..|+.+|+|..
T Consensus 35 tl~el~l~~~~~~~ViaI~r~g~~-i~~p~~~~~-l~~gD~L~v~G~~ 80 (92)
T d2fy8a2 35 SVLDADIHDVTGVIIIGVGRGDEL-IIDPPRDYS-FRAGDIILGIGKP 80 (92)
T ss_dssp BHHHHCHHHHHSCEEEEEEETTEE-EESCCTTCB-CCTTCEEEEEECH
T ss_pred CHHHcCCchhcCeEEEEEEeCCce-ecCCCCccE-eCCCCEEEEEECH
Confidence 466677777788888888887654 334556533 3358999999986
No 8
>d1rj8a_ b.22.1.1 (A:) Ectodysplasin A, Eda-a1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.40 E-value=16 Score=25.17 Aligned_cols=35 Identities=14% Similarity=0.363 Sum_probs=23.3
Q ss_pred EEEecCceEEEEeCCe-eeecCCCCcEEEEccccccch
Q psy2782 87 TIRKSKNILFVINKPD-VFKNPASDTYIVFGEAKIEDL 123 (147)
Q Consensus 87 tirKskn~lfvI~~Pd-Vyksp~SnTYIVFGEak~eDl 123 (147)
.+++.+.+.+.+.+|. ++......|| ||-.++-|+
T Consensus 104 ~L~~gD~l~V~v~~~~~~v~~~~~~Ty--FG~fkl~~~ 139 (140)
T d1rj8a_ 104 LLKARQKIAVKMVHADISINMSKHTTF--FGAIRLGEA 139 (140)
T ss_dssp EECTTCEEEEEECSCSCEEECCTTTSE--EEEEEEECC
T ss_pred EecCCCEEEEEecCCCcEEecCCCCEE--EEEEEeccC
Confidence 3566677777789997 3444445665 888777664
No 9
>d1s55a1 b.22.1.1 (A:161-316) TRANCE/RANKL cytokine {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.61 E-value=8.8 Score=26.38 Aligned_cols=36 Identities=22% Similarity=0.510 Sum_probs=25.4
Q ss_pred EEEEecCceEEEEeCCeeeecCCCCcEEEEccccccch
Q psy2782 86 VTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDL 123 (147)
Q Consensus 86 VtirKskn~lfvI~~PdVyksp~SnTYIVFGEak~eDl 123 (147)
+.+++.+.+.+.+++|.........| .||-.++-||
T Consensus 120 f~L~~gD~l~V~v~~~~~v~~~~~~T--fFG~f~l~~~ 155 (156)
T d1s55a1 120 FKLRAGEEISIQVSNPSLLDPDQDAT--YFGAFKVQDI 155 (156)
T ss_dssp EEECTTEEEEEEESCGGGBCCCTTTS--EEEEEEEECC
T ss_pred EEecCCCEEEEEeCChhhcccCCCCE--EEEEEEeccC
Confidence 34666777777888998655444555 5998888776
No 10
>d2plia1 d.145.1.4 (A:5-88) Uncharacterized protein NMB0537 {Neisseria meningitidis [TaxId: 487]}
Probab=31.76 E-value=11 Score=23.63 Aligned_cols=27 Identities=15% Similarity=0.315 Sum_probs=21.9
Q ss_pred CCeeeecCCCCcEEEEccccccchHHHH
Q psy2782 100 KPDVFKNPASDTYIVFGEAKIEDLSQQA 127 (147)
Q Consensus 100 ~PdVyksp~SnTYIVFGEak~eDlsqqa 127 (147)
-++|++. +.++|+|-|.+.++|++...
T Consensus 2 ~~~I~~~-~~~~~~v~g~~~l~dl~~~~ 28 (84)
T d2plia1 2 ADNIHAV-SSERWRIHAATEIEDINTFF 28 (84)
T ss_dssp CCSEEEE-ETTEEEEETTCBHHHHHHHH
T ss_pred CcceEEe-CCCEEEEEecCCHHHHHHHh
Confidence 3567775 57999999999999987654
No 11
>d1pyya2 d.11.1.1 (A:693-750) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=31.72 E-value=41 Score=19.53 Aligned_cols=25 Identities=12% Similarity=0.193 Sum_probs=18.0
Q ss_pred hhHHHHHHHHHHhCCeecCCeeEEEEEecCce
Q psy2782 63 RGEKKARKIMSKLGLKQIQGVSRVTIRKSKNI 94 (147)
Q Consensus 63 r~EKKaRKaL~KLGLk~V~gI~RVtirKskn~ 94 (147)
++.+.|.+.|..+||+ |++.-+++.
T Consensus 10 ~s~~~A~~~l~~~gl~-------v~~~g~g~~ 34 (58)
T d1pyya2 10 WTKETAETLAKWLNIE-------LEFQGSGST 34 (58)
T ss_dssp CBHHHHHHHHHHTTCE-------EEEESCCSE
T ss_pred CcHHHHHHHHHHcCCE-------EEEecCceE
Confidence 3457899999999997 455555543
No 12
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=31.19 E-value=44 Score=19.46 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhCCeecCCeeEEEEEecCceEEEEeCCe
Q psy2782 65 EKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPD 102 (147)
Q Consensus 65 EKKaRKaL~KLGLk~V~gI~RVtirKskn~lfvI~~Pd 102 (147)
..+..++|++ ++||.+|.+--..+.+.+.-+|+
T Consensus 17 ~~~Ie~~l~~-----~~GV~~v~v~~~~~~v~v~~d~~ 49 (69)
T d2qifa1 17 VKAVETSVGE-----LDGVSAVHVNLEAGKVDVSFDAD 49 (69)
T ss_dssp HHHHHHHHHT-----STTEEEEEEETTTTEEEEEECTT
T ss_pred HHHHHHHHhc-----CCCceEEEEECCCCEEEEEECCC
Confidence 3566777766 79999999877776666555553
No 13
>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.60 E-value=31 Score=20.48 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCeecCCeeEEEEEecCceEEEEeCCe
Q psy2782 66 KKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPD 102 (147)
Q Consensus 66 KKaRKaL~KLGLk~V~gI~RVtirKskn~lfvI~~Pd 102 (147)
.+.+++|.+ ++||.+|.+--..+.+.+.-+|+
T Consensus 18 ~~Ie~~l~~-----~~gV~~v~V~~~~~~~~v~~~~~ 49 (72)
T d2ggpb1 18 NTINTQLRA-----LKGVTKCDISLVTNECQVTYDNE 49 (72)
T ss_dssp HHHHHHHTT-----STTEEEEEECTTTCEEEEEECSS
T ss_pred HHHHHHHhc-----CCCceEEEEECCCCEEEEEECCC
Confidence 566677766 68999988876666655444443
No 14
>d1wexa_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein L-like {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.56 E-value=29 Score=21.60 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHhCCeecCCeeEEEEEecCce
Q psy2782 64 GEKKARKIMSKLGLKQIQGVSRVTIRKSKNI 94 (147)
Q Consensus 64 ~EKKaRKaL~KLGLk~V~gI~RVtirKskn~ 94 (147)
.|.-++.+++++| .|.+|.|.+.++.
T Consensus 28 te~~l~~~F~~fG-----~I~~~~~~~~k~~ 53 (104)
T d1wexa_ 28 VEADLVEALEKFG-----TICYVMMMPFKRQ 53 (104)
T ss_dssp CHHHHHHHHTTTS-----CEEEEEEETTTTE
T ss_pred CHHHHHHhhhhcc-----cceEEEEEeccee
Confidence 4677999999988 5888888776653
No 15
>d1vqow1 d.59.1.1 (W:1-154) Archaeal L30 (L30a) {Archaeon Haloarcula marismortui [TaxId: 2238]}
Probab=30.33 E-value=4.7 Score=28.90 Aligned_cols=49 Identities=14% Similarity=0.276 Sum_probs=35.1
Q ss_pred HHHHHHHHHhCCeecCCeeEEEEEecCceEEEEeCCeeeecC-CCCcEEEEccccccchHH
Q psy2782 66 KKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP-ASDTYIVFGEAKIEDLSQ 125 (147)
Q Consensus 66 KKaRKaL~KLGLk~V~gI~RVtirKskn~lfvI~~PdVyksp-~SnTYIVFGEak~eDlsq 125 (147)
++.|++|..|||+.+. +.+|+=++|.+..-- .-..||.+|++..+-+..
T Consensus 15 ~~~r~tL~~LrL~k~~-----------~~V~~~~tp~~~gML~kVk~yVt~G~~~~~tv~~ 64 (154)
T d1vqow1 15 TDIQDTLEMLNIHHVN-----------HCTLVPETDAYRGMVAKVNDFVAFGEPSQETLET 64 (154)
T ss_dssp HHHHHHHHHTTCCSTT-----------EEEEECCCHHHHHHHHHSTTSEEEECCCHHHHHH
T ss_pred HHHHHHHHHcCCCcCC-----------CEEEecCCHHHHHHHHhhccceeEecCCHHHHHH
Confidence 7899999999998664 466777777654311 134699999998765544
No 16
>d3bypa1 d.52.9.1 (A:6-87) Putative Zinc transporter CzrB {Thermus thermophilus [TaxId: 274]}
Probab=28.21 E-value=27 Score=21.46 Aligned_cols=33 Identities=12% Similarity=0.143 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhCCeecCCeeEEEEEecCceEEE
Q psy2782 65 EKKARKIMSKLGLKQIQGVSRVTIRKSKNILFV 97 (147)
Q Consensus 65 EKKaRKaL~KLGLk~V~gI~RVtirKskn~lfv 97 (147)
.+|.++++...-=..+-||..+.+|++++.+|+
T Consensus 7 ~~~I~~~i~~~~~~~vv~vh~lr~r~~G~~~~v 39 (82)
T d3bypa1 7 VERIRAFLQERIRGRALEVHDLKTRRAGPRSFL 39 (82)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHhCCCCCceeeeEEEeeEECCEEEE
Confidence 467888777641112447889999999987765
No 17
>d2oaia1 d.145.1.4 (A:5-91) Hemolysin TlyC {Xylella fastidiosa [TaxId: 2371]}
Probab=26.54 E-value=20 Score=22.35 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=22.3
Q ss_pred CCeeeecCCCCcEEEEccccccchHHHHH
Q psy2782 100 KPDVFKNPASDTYIVFGEAKIEDLSQQAQ 128 (147)
Q Consensus 100 ~PdVyksp~SnTYIVFGEak~eDlsqqaq 128 (147)
.|.+.+. ..++|+|-|.+.++|++....
T Consensus 2 ~~~i~~~-~dg~~~v~G~~~l~dl~~~l~ 29 (87)
T d2oaia1 2 DALMVTR-EDGSFLIDGTLPIEELREVLG 29 (87)
T ss_dssp CCSEEEC-TTSCEEEETTCBHHHHHHHHT
T ss_pred CCCeEEc-CCCEEEEEecCCHHHHHHHHC
Confidence 4666666 378999999999999987653
No 18
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.69 E-value=24 Score=20.89 Aligned_cols=25 Identities=16% Similarity=0.308 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHhCCeecCCeeEEEEEecCc
Q psy2782 64 GEKKARKIMSKLGLKQIQGVSRVTIRKSKN 93 (147)
Q Consensus 64 ~EKKaRKaL~KLGLk~V~gI~RVtirKskn 93 (147)
.|..+|.+++++| .|.+|.|.+.++
T Consensus 16 te~~L~~~F~~~G-----~I~~v~~~~~~~ 40 (79)
T d2bz2a1 16 TPTLLRGAFSPFG-----NIIDLSMDPPRN 40 (79)
T ss_dssp CHHHHHHHHSTTC-----CCSCEEEETTTT
T ss_pred CHHHHHHHHhccC-----ccceeeeccCCC
Confidence 4678999999998 467777766654
No 19
>d1vcta2 d.286.1.1 (A:108-201) Hypothetical protein PH0236, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=25.11 E-value=13 Score=23.31 Aligned_cols=47 Identities=23% Similarity=0.274 Sum_probs=33.0
Q ss_pred HHHHHhCCeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccc
Q psy2782 70 KIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEA 118 (147)
Q Consensus 70 KaL~KLGLk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEa 118 (147)
|.|..+++..-.|+.=+-|+|.+..+ .-..|+..-. ..|+.+|+|..
T Consensus 30 ktl~e~~~~~~~~v~ViaI~R~g~~i-~~p~~~~~l~-~gD~l~v~G~~ 76 (94)
T d1vcta2 30 KTLGELDLATNTGVWIIAVRRGKRWI-FGPNENFKIR-AGDVLIGRGTR 76 (94)
T ss_dssp CBHHHHCHHHHHSCEEEEEEETTEEE-ESCCTTCBCC-TTCEEEEEECH
T ss_pred cCHHHhccchhcCeEEEEEEECCeee-cCCCCCCEEC-CCCEEEEEECH
Confidence 34677788888888888898855443 3345553333 48999999986
No 20
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=21.91 E-value=22 Score=22.00 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=17.7
Q ss_pred CCCCcEEEEccccccchHHHH
Q psy2782 107 PASDTYIVFGEAKIEDLSQQA 127 (147)
Q Consensus 107 p~SnTYIVFGEak~eDlsqqa 127 (147)
-..++|+|-|.+.++|++...
T Consensus 8 ~~dg~~~v~G~~~l~dl~~~l 28 (85)
T d2p13a1 8 QADGTWLMDGWISIRKASNLL 28 (85)
T ss_dssp CTTSCEEEETTSBHHHHHHHH
T ss_pred cCCCeEEEEecCCHHHHHHHH
Confidence 356799999999999998764
No 21
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=21.80 E-value=65 Score=18.75 Aligned_cols=32 Identities=19% Similarity=0.375 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhCCeecCCeeEEEEEecCceEEEEeCC
Q psy2782 65 EKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKP 101 (147)
Q Consensus 65 EKKaRKaL~KLGLk~V~gI~RVtirKskn~lfvI~~P 101 (147)
..+..++|.+ ++||.+|.+-=..+.+.+.-+|
T Consensus 21 ~~~Ie~~l~~-----~~gV~~v~v~~~~~~~~v~~d~ 52 (72)
T d1p6ta1 21 AARIEKGLKR-----MPGVTDANVNLATETVNVIYDP 52 (72)
T ss_dssp HHHHHHHHTT-----SSSEEEEEEEGGGTEEEEEECT
T ss_pred HHHHHHHHHc-----CCCcEEEEEEcCCCEEEEEECC
Confidence 4566777666 7999999887666665554443
No 22
>d1so7a_ b.68.1.1 (A:) Sialidase 2 (Neu2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.56 E-value=55 Score=23.35 Aligned_cols=39 Identities=15% Similarity=0.359 Sum_probs=30.3
Q ss_pred cCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccccc
Q psy2782 80 IQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKI 120 (147)
Q Consensus 80 V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEak~ 120 (147)
+|-+.+.++|+++-.-|-| |-+-+.|..++++.|=+++.
T Consensus 1 ~p~~~~~~~f~~g~~~yRi--P~lv~~~~g~~l~A~a~~r~ 39 (374)
T d1so7a_ 1 LPVLQKESVFQSGAHAYRI--PALLYLPGQQSLLAFAEQRA 39 (374)
T ss_dssp CCCSEEEEEEECTTCCEEE--EEEEEETTTTEEEEEEEECC
T ss_pred CCccceeEEeECCcccEee--CEEEEEcCCCEEEEEEeEEc
Confidence 5889999999997555554 77777777888998977653
No 23
>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=21.14 E-value=78 Score=18.53 Aligned_cols=30 Identities=20% Similarity=0.326 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCCeecCCeeEEEEEecCceEEEEeC
Q psy2782 66 KKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINK 100 (147)
Q Consensus 66 KKaRKaL~KLGLk~V~gI~RVtirKskn~lfvI~~ 100 (147)
.+..++|.+ ++||..|.+--..+.+.+..+
T Consensus 19 ~~Ie~~l~~-----~~gV~~v~v~~~~~~~~v~~~ 48 (73)
T d1mwza_ 19 RKVENAVRQ-----LAGVNQVQVLFATEKLVVDAD 48 (73)
T ss_dssp HHHHHHHHT-----SSSEEEEEEETTTTEEEEEES
T ss_pred HHHHHHHhc-----CCCceEEEEECCCCEEEEEEC
Confidence 566667666 789999888766655544333
No 24
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.25 E-value=76 Score=19.36 Aligned_cols=26 Identities=15% Similarity=0.291 Sum_probs=19.9
Q ss_pred hhHHHHHHHHHHhCCeecCCeeEEEEEecCc
Q psy2782 63 RGEKKARKIMSKLGLKQIQGVSRVTIRKSKN 93 (147)
Q Consensus 63 r~EKKaRKaL~KLGLk~V~gI~RVtirKskn 93 (147)
-.|..++.+++++| .|.+|.|.++++
T Consensus 30 ~te~~L~~~F~~fG-----~i~~v~i~~~kg 55 (96)
T d1x4ga1 30 LTDQLMRQTFSPFG-----QIMEIRVFPEKG 55 (96)
T ss_dssp CCHHHHHHHHHHHS-----CEEEEEEETTTT
T ss_pred CCHHHHHHHHHHhC-----CceEEEEEecce
Confidence 34677999999988 478888877654
No 25
>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.15 E-value=71 Score=19.42 Aligned_cols=31 Identities=19% Similarity=0.398 Sum_probs=21.6
Q ss_pred HHHHHHHHHhCCeecCCeeEEEEEecCceEEEEeCC
Q psy2782 66 KKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKP 101 (147)
Q Consensus 66 KKaRKaL~KLGLk~V~gI~RVtirKskn~lfvI~~P 101 (147)
.+.+++|.+ ++||.+|.+--..+.+-+.-+|
T Consensus 25 ~~Ie~~l~~-----~~GV~~v~vn~~~~~v~v~~~~ 55 (84)
T d1q8la_ 25 STIEGKIGK-----LQGVQRIKVSLDNQEATIVYQP 55 (84)
T ss_dssp HHHHHHHHT-----CTTEEEEEECSTTTEEEEEECT
T ss_pred HHHHHHHhc-----CCCceEEEEECCCCEEceeecc
Confidence 567777776 7899998886666655554444
Done!