BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy280
(156 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|285002183|ref|NP_001165433.1| nuclear nucleic acid-binding protein C1D-like [Acyrthosiphon pisum]
gi|193693054|ref|XP_001946329.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like
[Acyrthosiphon pisum]
gi|239790557|dbj|BAH71832.1| ACYPI001594 [Acyrthosiphon pisum]
Length = 150
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 92/150 (61%), Gaps = 9/150 (6%)
Query: 2 TLNLIDELL--SKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAIN 59
TL+L +ELL + + S +L+ + +I +++ +D+ + ++KI+ DLL+ +A+N
Sbjct: 3 TLDLDEELLKDEELVASIQNLDHSIVDIETLLESRMDLDYNSMSVEEKIKHDLLIAFALN 62
Query: 60 SLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
SLY++ LR+ VD S +K EL R++ TM K K ++ R+DK A++RF+ +ALW
Sbjct: 63 SLYWVYLRLDGVDPTSHNIKRELDRVKSTMDMAKGAMAKKNML-RVDKKAAERFIDHALW 121
Query: 118 TPPESDTPCDKKTKDIPPVSKKTKFDADGN 147
TP + +++ ++ +KK KFD +G+
Sbjct: 122 TPEDK----KRRSHNMENPNKKIKFDENGD 147
>gi|156542114|ref|XP_001599995.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Nasonia
vitripennis]
Length = 147
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 71/99 (71%), Gaps = 3/99 (3%)
Query: 24 VDEISEIIKQVQAVD-FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVEL 80
+D+I E++K + + KL N++KI+ +LL+ +++NSL+++ +R + +D +K E
Sbjct: 25 IDQIQEVLKFAEEPGLYDKLCNEEKIKFNLLMSFSLNSLFWMYMRAEGIDPTKHQIKSEN 84
Query: 81 KRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+R++++M + KQ D+ TIMPR+++DA++RFVR+ LW P
Sbjct: 85 ERLKQSMIRAKQIHDRNTIMPRINRDAAQRFVRSGLWVP 123
>gi|242008621|ref|XP_002425101.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508766|gb|EEB12363.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 155
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 37 VDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTK 94
D+ L + K+ DLL+ +AIN+ Y+I+LR + +D + +K ++ RI++ M + K+
Sbjct: 41 TDYDSLSLEDKVRFDLLLAFAINTFYWIHLRTQGIDPANHEIKHQINRIKDYMLQSKKLY 100
Query: 95 DKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTKD 132
DK MP +DKDA+KRF+R+ LWTP S + + T D
Sbjct: 101 DKKKFMPVIDKDAAKRFIRSGLWTPNTSSSNTELTTSD 138
>gi|380017940|ref|XP_003692900.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 1
[Apis florea]
gi|380017942|ref|XP_003692901.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 2
[Apis florea]
Length = 128
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 39 FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDK 96
+ KL N KIE +LL+ Y +NS++++ LR + +D +K+E R++++M + KQ DK
Sbjct: 41 YEKLSNTDKIEYNLLMSYCLNSMFWMYLRAEGIDPAKHRIKLENDRLKKSMTRAKQINDK 100
Query: 97 LTIMPRLDKDASKRFVRNALW 117
T+MP ++KDA++RFVRN LW
Sbjct: 101 KTLMPHINKDAAQRFVRNGLW 121
>gi|110760487|ref|XP_001120945.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 1
[Apis mellifera]
gi|328789892|ref|XP_003251342.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 2
[Apis mellifera]
Length = 128
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 39 FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDK 96
+ KL N KIE +LL+ Y +NS++++ LR + +D +K+E R++++M + KQ DK
Sbjct: 41 YEKLSNTDKIEYNLLMSYCLNSMFWMYLRAEGIDPAKHRIKLENDRLKKSMTRAKQINDK 100
Query: 97 LTIMPRLDKDASKRFVRNALW 117
T+MP ++KDA++RFVRN LW
Sbjct: 101 KTLMPHINKDAAQRFVRNGLW 121
>gi|325302838|tpg|DAA34443.1| TPA_inf: DNA-binding protein C1D [Amblyomma variegatum]
Length = 145
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 47 KIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLD 104
K DL +LY++NSL+++ L D V+ EL+R++E M + KQ DK P+LD
Sbjct: 51 KARLDLTLLYSLNSLFWMYLCTVGEDPKQHTVRRELERVKEYMARAKQIADKAK-APKLD 109
Query: 105 KDASKRFVRNALWTPPESDTPCDKKTKDIPPVSKK 139
A++RFVR++LWTP SD+ ++K PP K+
Sbjct: 110 AGAAQRFVRSSLWTPASSDSGANQKGNQEPPRKKR 144
>gi|350395989|ref|XP_003484400.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Bombus
impatiens]
gi|350395992|ref|XP_003484401.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Bombus
impatiens]
Length = 128
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 39 FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDK 96
+ KL + KI+ +LL+ Y +NS++++ LR + +D +K E R++ +M + KQ DK
Sbjct: 41 YEKLSDTDKIQYNLLMSYCLNSVFWMYLRAEGIDPAKHQIKSENDRLKRSMTRAKQINDK 100
Query: 97 LTIMPRLDKDASKRFVRNALW 117
T MPR++KDA++RFVRN LW
Sbjct: 101 NTFMPRVNKDAAQRFVRNGLW 121
>gi|340730173|ref|XP_003403361.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Bombus
terrestris]
Length = 147
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 39 FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDK 96
+ KL + KI+ +LL+ Y +NS++++ LR + +D +K E R++ +M + KQ DK
Sbjct: 41 YEKLSDTDKIQYNLLMSYCLNSVFWMYLRAEGIDPAKHQIKSENDRLKRSMTRAKQINDK 100
Query: 97 LTIMPRLDKDASKRFVRNALW 117
T MPR++KDA++RFVRN LW
Sbjct: 101 NTFMPRVNKDAAQRFVRNGLW 121
>gi|383862824|ref|XP_003706883.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Megachile
rotundata]
Length = 130
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 39 FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDK 96
+ KL N+ KI+ +LL+ Y +NS++++ LR + +D +K+E R++++M + KQ D+
Sbjct: 41 YEKLSNEDKIQYNLLMSYCLNSMFWMYLRAEGIDPTKHQIKLENDRLKKSMMRAKQINDR 100
Query: 97 LTIMPRLDKDASKRFVRNALW 117
T+MPR++K+ ++R +RN LW
Sbjct: 101 NTLMPRVNKEVAQRLIRNGLW 121
>gi|443708326|gb|ELU03495.1| hypothetical protein CAPTEDRAFT_102365 [Capitella teleta]
Length = 152
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 8/115 (6%)
Query: 6 IDELLSKFINSQHDLESLVDEISEI-IKQVQAVDFTKLPNDKKIEADLLVLYAINSLY-- 62
+ E LS F S + E L+ + E + QVQA D L K + +L+ +YA+NSLY
Sbjct: 12 LQERLSSFDESLSNFEELIKSLHETPLNQVQA-DMKPL---DKAKLELVGVYALNSLYWM 67
Query: 63 FINLRIKHVDSDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
++N+R ++ ++ EL+R++ MK+ K DK P+LDKDASKRFVR+ALW
Sbjct: 68 YLNIRGENPKEHSIRQELERVKSYMKRVKDITDK-EKAPKLDKDASKRFVRSALW 121
>gi|318054606|ref|NP_001187659.1| nuclear nucleic acid-binding protein C1D [Ictalurus punctatus]
gi|308323625|gb|ADO28948.1| nuclear nucleic acid-binding protein c1d [Ictalurus punctatus]
Length = 143
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
I E L+ F++S +++++ + + K D KL ++ + DL+ +YA+NSL+++
Sbjct: 14 IAEYLTGFVSSVGSVQNVIQTLMSVSKG----DSLKLGTLEQAKLDLMSVYALNSLFWMY 69
Query: 66 LRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESD 123
L + V+ +K EL+RI+ M + K+ DK LDKDA+ RFVRNALW ++
Sbjct: 70 LVTQGVNPKDHGIKQELERIRTNMNRIKEITDKKQAAC-LDKDAASRFVRNALWVGKDT- 127
Query: 124 TPCDKKTKDIPP 135
P D K P
Sbjct: 128 KPKDSMGKHSKP 139
>gi|158286190|ref|XP_001688044.1| AGAP007147-PA [Anopheles gambiae str. PEST]
gi|157020350|gb|EDO64693.1| AGAP007147-PA [Anopheles gambiae str. PEST]
Length = 162
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Query: 13 FINSQHDLESLVDEISEIIKQVQAVDFTKLPN---DKKIEADLLVLYAINSLYFIN---L 66
FI + +L +D+I + V ++ K PN ++K+ D L + +NSL++++ L
Sbjct: 25 FIRNNENLMQAIDQIQVTLANVNR-EYEKYPNFTAEEKVRFDTLCAFCVNSLFWMHEKML 83
Query: 67 RIKHVDSDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPC 126
+ D +K +L R++E MK+ + D LT PRLD+ A++RFVR L+ +++
Sbjct: 84 GRPNTVMDDIKADLDRVREAMKRLQTIHDNLTKRPRLDQPAAQRFVRAGLYDANNAES-- 141
Query: 127 DKKTKDIPP 135
K D PP
Sbjct: 142 -DKQNDAPP 149
>gi|442750179|gb|JAA67249.1| Putative sun-cor steroid hormone receptor co-repressor [Ixodes
ricinus]
Length = 209
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 42 LPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTI 99
LP DK DL +LYA+NSL+++ L D V+ EL+RI+E M + +Q DK
Sbjct: 53 LPLDK-ARLDLTILYAMNSLFWMYLSTTGEDPKQHGVRRELERIKEYMVRARQIADKAKA 111
Query: 100 MPRLDKDASKRFVRNALWTP 119
P+LD+ A++RFVRN+LW P
Sbjct: 112 -PKLDQGAAQRFVRNSLWQP 130
>gi|157133078|ref|XP_001656164.1| hypothetical protein AaeL_AAEL002933 [Aedes aegypti]
gi|108881592|gb|EAT45817.1| AAEL002933-PA [Aedes aegypti]
Length = 152
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 11 SKFINSQHDLESLVDEISE--IIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRI 68
+ FIN L ++ I + I + ++ ++K++ DL + Y+INSLY++ +I
Sbjct: 18 TAFINKNETLSQCIERIRQNLAIAREDYKNYEGFSLEEKVKYDLHLSYSINSLYWMYYKI 77
Query: 69 KHVDSD--FVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPC 126
+D + +K EL RI+ M + K+ D P LD+ A+KRFVR L+ + P
Sbjct: 78 IGLDPNKHGIKDELTRIKAAMMREKEIYDHRFNRPTLDQGAAKRFVRAGLFDHKNRNKPL 137
Query: 127 DKKTKDIPPVSKKTKFD 143
DK D PP +KK +F+
Sbjct: 138 DK--ADTPP-NKKIRFE 151
>gi|346473043|gb|AEO36366.1| hypothetical protein [Amblyomma maculatum]
Length = 149
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 47 KIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLD 104
K DL +LY++NSL+++ L D V+ EL+R++E M + KQ DK P+LD
Sbjct: 57 KARLDLTLLYSLNSLFWMYLCTVGEDPKQHAVRRELERVKEYMVRAKQIADKAKA-PKLD 115
Query: 105 KDASKRFVRNALWTPPESDTPCDKKTKDIPPVSKK 139
A++RF+R++LWTP SD +K+ PP ++
Sbjct: 116 AGAAQRFIRSSLWTP--SDDSASQKSSQEPPRKRR 148
>gi|240976663|ref|XP_002402463.1| sun-cor steroid hormone receptor co-repressor, putative [Ixodes
scapularis]
gi|215491184|gb|EEC00825.1| sun-cor steroid hormone receptor co-repressor, putative [Ixodes
scapularis]
Length = 165
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 42 LPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTI 99
LP DK DL +LYA+NSL+++ L D V+ EL+RI+E M + +Q DK
Sbjct: 53 LPLDK-ARLDLTILYAMNSLFWMYLSTTGEDPKQHGVRRELERIKEYMVRARQIADKAKA 111
Query: 100 MPRLDKDASKRFVRNALWTP 119
P+LD+ A++RFVRN+LW P
Sbjct: 112 -PKLDQGAAQRFVRNSLWQP 130
>gi|346473045|gb|AEO36367.1| hypothetical protein [Amblyomma maculatum]
Length = 149
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 47 KIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLD 104
K DL +LY++NSL+++ L D V+ EL+R++E M + KQ DK P+LD
Sbjct: 57 KARLDLTLLYSLNSLFWMYLCTVGEDPKQHAVRRELERVKEYMVRAKQIADKAKA-PKLD 115
Query: 105 KDASKRFVRNALWTPPESDTPCDKKTKDIPPVSKK 139
A++RF+R++LWTP SD +K+ PP ++
Sbjct: 116 AGAAQRFIRSSLWTP--SDDSASQKSTQEPPRKRR 148
>gi|229367222|gb|ACQ58591.1| Nuclear nucleic acid-binding protein C1D [Anoplopoma fimbria]
Length = 147
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 20/133 (15%)
Query: 6 IDELLSKFINSQHDLESLVDEISEI-----IKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
IDE L+ F +S D+ ++++++ + ++ + A+D KL DL+ Y +NS
Sbjct: 14 IDEQLTGFHSSVCDINTMLEKMMSMPRNDQLQNLDALDQAKL--------DLMSAYTLNS 65
Query: 61 LYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWT 118
L ++ L K V+ D +K EL+RI+ M K K+ D+ RLDK A+ RF+RNAL+
Sbjct: 66 LLWMYLVTKGVNPREDGIKQELERIRTHMNKVKEITDRKKAA-RLDKGAAARFMRNALFD 124
Query: 119 P----PESDTPCD 127
P +DTP D
Sbjct: 125 PNARENAADTPSD 137
>gi|326914849|ref|XP_003203735.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Meleagris
gallopavo]
Length = 142
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 17/134 (12%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
I + L+ F NS ++ ++ + SE++++++ ++ KL DL+ Y +NS
Sbjct: 14 IHDYLATFENSLTSVDEMLKTMMSVSRSELLQKLEPLEQAKL--------DLVSAYTLNS 65
Query: 61 LYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWT 118
++++ L + ++ VK EL+RI+ M K K+ DK +LDK A+ RFVRNALW
Sbjct: 66 MFWVYLATQGINPKEHPVKQELERIRTYMNKVKEIADKKKA-SKLDKGAASRFVRNALWE 124
Query: 119 P-PESDTPCDKKTK 131
P PE+D K K
Sbjct: 125 PNPENDQTSAKAKK 138
>gi|321468801|gb|EFX79784.1| hypothetical protein DAPPUDRAFT_304365 [Daphnia pulex]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 81/141 (57%), Gaps = 11/141 (7%)
Query: 18 HDLESLVDEISEIIKQVQAVDFTKLPND-KKIEA---DLLVLYAINSLYFINLRIKHVD- 72
+L+S + E+ ++ + +V T++ + K IE D +YA+ SL++ ++ + VD
Sbjct: 18 QNLDSALSEMEAVVNALTSVPLTEVQSCLKPIERSKYDTASVYAVTSLFWAYMKTRGVDP 77
Query: 73 -SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDT--PCDKK 129
++ + EL+R++ + + K+ D+ + P++D A+KRF+R LW P +S+ +++
Sbjct: 78 KTNGLPRELERVKSAIGRSKEIVDR-ALAPKVDISAAKRFIRGGLWEPKDSEQREGSNQE 136
Query: 130 TKDI--PPVSKKTKFDADGNV 148
D+ PP +K+ +FD G+
Sbjct: 137 KSDVSKPPPNKRIRFDDAGST 157
>gi|347921649|ref|NP_001026207.2| nuclear nucleic acid-binding protein C1D [Gallus gallus]
gi|347921776|ref|NP_001231666.1| nuclear nucleic acid-binding protein C1D [Gallus gallus]
Length = 144
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 22/136 (16%)
Query: 2 TLNLIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSL 61
+L +DE+L ++ SE++++++ ++ KL DL+ Y +NS+
Sbjct: 26 SLTSVDEMLKTMMSVSR---------SELLQKLEPLEQAKL--------DLVSAYTLNSM 68
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + ++ VK EL+RI+ M K K+ DK +LDK A+ RFVRNALW P
Sbjct: 69 FWVYLATQGINPKEHPVKQELERIRTYMNKVKEIADKKKA-SKLDKGAASRFVRNALWEP 127
Query: 120 -PESD-TPCDKKTKDI 133
PE+D TP K + +
Sbjct: 128 NPENDQTPTKAKKRKM 143
>gi|355782802|gb|EHH64723.1| hypothetical protein EGM_18021 [Macaca fascicularis]
Length = 141
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS +D + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFGNS-------IDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLISAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEMTDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|119600824|gb|EAW80418.1| hCG1791993 [Homo sapiens]
Length = 142
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I + LS F NS +D + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 15 IHDYLSAFANS-------IDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 67
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFVRNALW P
Sbjct: 68 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVRNALWEP 126
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 127 KPKNASKVAHKGK 139
>gi|355562459|gb|EHH19053.1| hypothetical protein EGK_19691 [Macaca mulatta]
Length = 141
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS +D + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFGNS-------IDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLISAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P + + K K
Sbjct: 126 KPRNASKVANKGK 138
>gi|350538335|ref|NP_001233713.1| nuclear nucleic acid-binding protein C1D [Cricetulus griseus]
gi|81865496|sp|Q7TSU0.1|C1D_CRIGR RecName: Full=Nuclear nucleic acid-binding protein C1D
gi|31095452|gb|AAP43113.1| nuclear DNA-binding protein C1D [Cricetulus griseus]
Length = 141
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 20 LESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--S 73
LES + + +++K + +V KL ++ + DL+ Y +NS++++ L + V+
Sbjct: 21 LESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKE 80
Query: 74 DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTP 125
VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P + +TP
Sbjct: 81 HPVKQELERIRVYMNRVKEITDKKKA-AKLDRGAASRFVKNALWEPKQKNTP 131
>gi|82080814|sp|Q5ZHS3.1|C1D_CHICK RecName: Full=Nuclear nucleic acid-binding protein C1D
gi|53136782|emb|CAG32720.1| hypothetical protein RCJMB04_33m12 [Gallus gallus]
Length = 142
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 22/136 (16%)
Query: 2 TLNLIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSL 61
+L +DE+L ++ SE++++++ ++ KL DL+ Y +NS+
Sbjct: 24 SLTSVDEMLKTMMSVSR---------SELLQKLEPLEQAKL--------DLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + ++ VK EL+RI+ M K K+ DK +LDK A+ RFVRNALW P
Sbjct: 67 FWVYLATQGINPKEHPVKQELERIRTYMNKVKEIADKKKA-SKLDKGAASRFVRNALWEP 125
Query: 120 -PE-SDTPCDKKTKDI 133
PE TP K + +
Sbjct: 126 NPENGQTPAKAKKRKM 141
>gi|332373792|gb|AEE62037.1| unknown [Dendroctonus ponderosae]
Length = 134
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDF--V 76
+L + V +I +I+ D ++ ++E DL + YA+N+LY++ L+ K D +F V
Sbjct: 18 NLRNSVQKIKKILDTALEADTSQFSLKDQVEFDLFLTYALNALYWMYLKTKGEDPNFHDV 77
Query: 77 KVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTK 131
K +L R+++ M K KQ ++ TI P++++ + RFV++ + E + P +KK K
Sbjct: 78 KNQLARVKDYMVKAKQADERNTIRPKVNQAVAARFVKHGI-HHKEEEQPPNKKIK 131
>gi|344250611|gb|EGW06715.1| Nuclear nucleic acid-binding protein C1D [Cricetulus griseus]
Length = 141
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 7/112 (6%)
Query: 20 LESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--S 73
LES + + +++K + +V KL ++ + DL+ Y +NS++++ L + V+
Sbjct: 21 LESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKE 80
Query: 74 DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTP 125
VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P + +TP
Sbjct: 81 HPVKQELERIRVYMNRVKEITDKKKA-AKLDRGAASRFVKNALWEPKQKNTP 131
>gi|426223428|ref|XP_004005877.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Ovis aries]
Length = 141
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 23/142 (16%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 PESDTPCDKKTKDIPPVSKKTK 141
K K+ P V+ K K
Sbjct: 126 ---------KPKNAPKVANKGK 138
>gi|31542251|ref|NP_065583.2| nuclear nucleic acid-binding protein C1D [Mus musculus]
gi|81882132|sp|O35473.1|C1D_MOUSE RecName: Full=Nuclear nucleic acid-binding protein C1D; Short=mC1D;
AltName: Full=Small unique nuclear receptor corepressor;
Short=Sun-CoR; Short=SunCoR
gi|2642586|gb|AAC53520.1| small unique nuclear receptor co-repressor [Mus musculus]
gi|13529392|gb|AAH05436.1| C1D nuclear receptor co-repressor [Mus musculus]
gi|26324642|dbj|BAC26075.1| unnamed protein product [Mus musculus]
gi|26330474|dbj|BAC28967.1| unnamed protein product [Mus musculus]
gi|148708741|gb|EDL40688.1| nuclear DNA binding protein [Mus musculus]
Length = 141
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 20 LESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--S 73
LES + + +++K + AV KL ++ + DL+ Y +NS++++ L + V+
Sbjct: 21 LESSLGAVDDMLKTMMAVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKE 80
Query: 74 DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTP 125
VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P TP
Sbjct: 81 HPVKQELERIRVYMNRVKEITDKKKA-AKLDRGAASRFVKNALWEPKAKSTP 131
>gi|402880320|ref|XP_003903755.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Papio
anubis]
Length = 141
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS +D + E+++ + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFGNS-------IDAVDEMLENMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEMTDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|312088170|ref|XP_003145755.1| nuclear DNA-binding protein C1D [Loa loa]
gi|307759079|gb|EFO18313.1| nuclear DNA-binding protein C1D, partial [Loa loa]
Length = 204
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 10/98 (10%)
Query: 40 TKLPNDKKIEADLLVLYAINSLYFINLRI---KHVDSDFVKVELKRIQETMKKFKQTKDK 96
T+ P +K+E DL+ ++ INSLY++ L K D++ ++ E+ R +E M + KQ +++
Sbjct: 39 TQRPPLEKLEIDLMSVFVINSLYWMLLCTHGQKPKDNELLQNEINRTKEYMGRLKQLEER 98
Query: 97 LTIMPRLDKDASKRFVRNALWTPPE------SDTPCDK 128
T P L++ A++ FVRNALW P + SD C++
Sbjct: 99 KTA-PCLNQRAARSFVRNALWEPKQQQRSDTSDHSCEE 135
>gi|170071070|ref|XP_001869802.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867000|gb|EDS30383.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 151
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 8/137 (5%)
Query: 11 SKFINSQHDLESLVDEISE--IIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRI 68
+ FI +L ++ I + + + ++ ++K++ DL + Y+INSLY++ +I
Sbjct: 18 TAFIRKNENLSECIERIRQNLAVAREDYKNYESFTLEEKVKYDLHLSYSINSLYWMYHKI 77
Query: 69 KHVDSD--FVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPC 126
+D + +K EL RI+ M + K+ D P+LD+ A+KRFVR L+ D P
Sbjct: 78 IGLDPNKHGIKDELARIKAAMLREKEIYDHKYNRPQLDQGAAKRFVRAGLYDHKNRDKP- 136
Query: 127 DKKTKDIPPVSKKTKFD 143
+ PP +KK +F+
Sbjct: 137 ---EANDPPPNKKIRFE 150
>gi|109091160|ref|XP_001094689.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Macaca
mulatta]
Length = 141
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS +D + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFGNS-------IDAVDEMLKNMMSVSRNELLQKLDPLEQAKVDLISAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ D +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEMTDTKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|156375743|ref|XP_001630239.1| predicted protein [Nematostella vectensis]
gi|156217255|gb|EDO38176.1| predicted protein [Nematostella vectensis]
Length = 169
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 51 DLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDAS 108
+L+V Y+INSL+++ L + +D +K EL RI++ M K K+ + K + R+DK A+
Sbjct: 57 NLVVAYSINSLFWMYLITQGMDPKEHPIKQELDRIKKYMVKVKEVQHKQEVSMRIDKGAA 116
Query: 109 KRFVRNALWTP 119
KRFV++ALW P
Sbjct: 117 KRFVKSALWQP 127
>gi|345776674|ref|XP_855373.2| PREDICTED: uncharacterized protein LOC612549 [Canis lupus
familiaris]
Length = 141
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LDK A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDKGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNSSKVANKGK 138
>gi|426364385|ref|XP_004049293.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 1
[Gorilla gorilla gorilla]
gi|426364387|ref|XP_004049294.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 2
[Gorilla gorilla gorilla]
Length = 141
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 15/134 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVCMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTKD 132
P++ + K K
Sbjct: 126 KPKNASKVANKGKS 139
>gi|332226680|ref|XP_003262520.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 1
[Nomascus leucogenys]
gi|332226682|ref|XP_003262521.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 2
[Nomascus leucogenys]
gi|332226684|ref|XP_003262522.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 3
[Nomascus leucogenys]
gi|441641964|ref|XP_004090407.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Nomascus
leucogenys]
gi|441641967|ref|XP_004090408.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Nomascus
leucogenys]
gi|441641970|ref|XP_004090409.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Nomascus
leucogenys]
Length = 141
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 15/134 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSVFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRGYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTKD 132
P++ + K K+
Sbjct: 126 KPKNASKVANKGKN 139
>gi|157820245|ref|NP_001099491.1| nuclear nucleic acid-binding protein C1D [Rattus norvegicus]
gi|392341212|ref|XP_003754282.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Rattus
norvegicus]
gi|392349025|ref|XP_003750270.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Rattus
norvegicus]
gi|149044727|gb|EDL97913.1| similar to small unique nuclear receptor co-repressor (predicted)
[Rattus norvegicus]
gi|197246753|gb|AAI68684.1| Nuclear DNA binding protein [Rattus norvegicus]
Length = 141
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 20 LESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--S 73
LES + + +++K + +V KL ++ + DL+ Y +NS++++ L + V+
Sbjct: 21 LESSLGAVDDMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKE 80
Query: 74 DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTP 125
VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P +TP
Sbjct: 81 HPVKQELERIRVYMNRVKEITDKKKAA-KLDRGAASRFVKNALWEPKPKNTP 131
>gi|410043726|ref|XP_003951667.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 1
[Pan troglodytes]
gi|410043728|ref|XP_003951668.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 2
[Pan troglodytes]
Length = 141
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 15/134 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVCMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTKD 132
P++ + K K
Sbjct: 126 KPKNASKVANKGKS 139
>gi|426335784|ref|XP_004029388.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Gorilla
gorilla gorilla]
Length = 180
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 14/120 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 53 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 105
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 106 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 164
>gi|291382811|ref|XP_002708082.1| PREDICTED: nuclear DNA-binding protein [Oryctolagus cuniculus]
gi|291386675|ref|XP_002709876.1| PREDICTED: nuclear DNA-binding protein [Oryctolagus cuniculus]
Length = 141
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 15/134 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------ISTVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEIADKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTKD 132
P++ + K K+
Sbjct: 126 KPKNASKVASKGKN 139
>gi|355751365|gb|EHH55620.1| hypothetical protein EGM_04863, partial [Macaca fascicularis]
Length = 179
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 14/120 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 52 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 104
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 105 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 163
>gi|5453583|ref|NP_006324.1| nuclear nucleic acid-binding protein C1D [Homo sapiens]
gi|27894373|ref|NP_775269.1| nuclear nucleic acid-binding protein C1D [Homo sapiens]
gi|298231253|ref|NP_001177192.1| nuclear nucleic acid-binding protein C1D [Homo sapiens]
gi|298231256|ref|NP_001177194.1| nuclear nucleic acid-binding protein C1D [Homo sapiens]
gi|74754472|sp|Q13901.1|C1D_HUMAN RecName: Full=Nuclear nucleic acid-binding protein C1D; Short=hC1D
gi|1185119|emb|CAA64845.1| C1D protein [Homo sapiens]
gi|13528873|gb|AAH05235.1| C1D nuclear receptor co-repressor [Homo sapiens]
gi|16307018|gb|AAH09584.1| C1D nuclear receptor co-repressor [Homo sapiens]
gi|16307026|gb|AAH09589.1| C1D nuclear receptor co-repressor [Homo sapiens]
gi|16740845|gb|AAH16284.1| C1D nuclear receptor co-repressor [Homo sapiens]
gi|62630142|gb|AAX88887.1| unknown [Homo sapiens]
gi|119620290|gb|EAW99884.1| nuclear DNA-binding protein, isoform CRA_a [Homo sapiens]
gi|119620291|gb|EAW99885.1| nuclear DNA-binding protein, isoform CRA_a [Homo sapiens]
gi|167773923|gb|ABZ92396.1| nuclear DNA-binding protein [synthetic construct]
Length = 141
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 23/142 (16%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 PESDTPCDKKTKDIPPVSKKTK 141
K+K+ V+ K K
Sbjct: 126 ---------KSKNASKVANKGK 138
>gi|432902673|ref|XP_004077040.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Oryzias
latipes]
Length = 154
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 24/151 (15%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
IDE L F +S ++S++D++ +E++ ++ +D KL DL+ Y +NS
Sbjct: 12 IDEQLRSFDSSVTAVKSMLDKLMSMSRNELLVKLDPLDQAKL--------DLMSAYTLNS 63
Query: 61 LYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWT 118
L+++ L + ++ +K EL+RI+ M + K+ DK RLDK A+ RF+R+AL+
Sbjct: 64 LFWVYLVTRGINPREHGIKQELERIRAYMNRVKEITDKKKAA-RLDKGAASRFIRSALYE 122
Query: 119 PPESDTP--------CDKKTKDIPPVSKKTK 141
P + D+ D + PP +K +
Sbjct: 123 PDDKDSGKKNESKKQADSTAAEPPPKRQKQR 153
>gi|344283880|ref|XP_003413699.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Loxodonta
africana]
Length = 141
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 23/142 (16%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEIADKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 PESDTPCDKKTKDIPPVSKKTK 141
K K++ V+ K K
Sbjct: 126 ---------KPKNVSKVANKGK 138
>gi|324516111|gb|ADY46423.1| Nuclear nucleic acid-binding protein C1D [Ascaris suum]
Length = 177
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 47 KIEADLLVLYAINSLYFINL--RIKHV-DSDFVKVELKRIQETMKKFKQTKDKLTIMPRL 103
+ D++ L+AINSLY+I L R K+ +++ + EL R ++ M++ KQ +++ + PRL
Sbjct: 46 RARVDVMSLFAINSLYWILLCTRGKNPKENESLTNELARTKQCMERLKQIEERASA-PRL 104
Query: 104 DKDASKRFVRNALWTPPESDTPCD 127
++ A+ FVRNALW P+ TP D
Sbjct: 105 NRRAASSFVRNALWELPQR-TPAD 127
>gi|197099406|ref|NP_001125429.1| nuclear nucleic acid-binding protein C1D [Pongo abelii]
gi|114577768|ref|XP_001167269.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 3 [Pan
troglodytes]
gi|114577770|ref|XP_001167235.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 2 [Pan
troglodytes]
gi|296223684|ref|XP_002757727.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Callithrix
jacchus]
gi|397521769|ref|XP_003830960.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 1 [Pan
paniscus]
gi|397521771|ref|XP_003830961.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 2 [Pan
paniscus]
gi|403260540|ref|XP_003922726.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Saimiri
boliviensis boliviensis]
gi|75042085|sp|Q5RBU4.1|C1D_PONAB RecName: Full=Nuclear nucleic acid-binding protein C1D
gi|55728027|emb|CAH90766.1| hypothetical protein [Pongo abelii]
gi|410210748|gb|JAA02593.1| C1D nuclear receptor co-repressor [Pan troglodytes]
gi|410341083|gb|JAA39488.1| C1D nuclear receptor co-repressor [Pan troglodytes]
Length = 141
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|332020680|gb|EGI61086.1| Nuclear nucleic acid-binding protein C1D [Acromyrmex echinatior]
Length = 145
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Query: 39 FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSD--FVKVELKRIQETMKKFKQTKDK 96
F KLPN KI+ +LL+ Y++NSL+++ L+ + +D ++ E +R+++ M + KQ DK
Sbjct: 41 FDKLPNTDKIKYNLLLSYSLNSLFWMYLKAEGIDPSKHRIRSENERLKKAMIRAKQINDK 100
Query: 97 LTIMPRLDKDASKRFVRNALWTP 119
T+MPR+D +A+KRF+RN+LW P
Sbjct: 101 NTLMPRVDINAAKRFMRNSLWEP 123
>gi|440907836|gb|ELR57932.1| Nuclear nucleic acid-binding protein C1D, partial [Bos grunniens
mutus]
Length = 142
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 15 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 67
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 68 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 126
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 127 KPKNASKVANKGK 139
>gi|426335780|ref|XP_004029386.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Gorilla
gorilla gorilla]
gi|426335782|ref|XP_004029387.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Gorilla
gorilla gorilla]
Length = 141
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|82697319|ref|NP_001032525.1| nuclear nucleic acid-binding protein C1D [Bos taurus]
gi|122138866|sp|Q32PE4.1|C1D_BOVIN RecName: Full=Nuclear nucleic acid-binding protein C1D
gi|79158736|gb|AAI08148.1| C1D nuclear receptor co-repressor [Bos taurus]
gi|296482412|tpg|DAA24527.1| TPA: nuclear nucleic acid-binding protein C1D [Bos taurus]
Length = 141
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|302191691|ref|NP_001180533.1| nuclear nucleic acid-binding protein C1D [Macaca mulatta]
gi|402891096|ref|XP_003908795.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Papio
anubis]
gi|355746950|gb|EHH51564.1| hypothetical protein EGM_10966 [Macaca fascicularis]
gi|380808770|gb|AFE76260.1| nuclear nucleic acid-binding protein C1D [Macaca mulatta]
Length = 141
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P + + K K
Sbjct: 126 KPRNASKVANKGK 138
>gi|281347166|gb|EFB22750.1| hypothetical protein PANDA_014830 [Ailuropoda melanoleuca]
Length = 142
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 15 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 67
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 68 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 126
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 127 KPKNASKVANKGK 139
>gi|431912634|gb|ELK14652.1| Nuclear nucleic acid-binding protein C1D [Pteropus alecto]
Length = 141
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|311252501|ref|XP_003125124.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 1
[Sus scrofa]
gi|311252503|ref|XP_003125125.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 2
[Sus scrofa]
Length = 141
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHECLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|301779860|ref|XP_002925351.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like
[Ailuropoda melanoleuca]
gi|410954938|ref|XP_003984116.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Felis catus]
Length = 141
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|158261925|dbj|BAF83140.1| unnamed protein product [Homo sapiens]
Length = 141
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 23/142 (16%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + ++ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGINPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 PESDTPCDKKTKDIPPVSKKTK 141
K+K+ V+ K K
Sbjct: 126 ---------KSKNASKVANKGK 138
>gi|384944746|gb|AFI35978.1| nuclear nucleic acid-binding protein C1D [Macaca mulatta]
Length = 141
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRIYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P + + K K
Sbjct: 126 KPRNASKVANKGK 138
>gi|149727873|ref|XP_001492599.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Equus
caballus]
gi|349604850|gb|AEQ00284.1| Nuclear nucleic acid-binding protein C1D-like protein [Equus
caballus]
Length = 141
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 126 KPKNASKVANKGK 138
>gi|355674340|gb|AER95277.1| nuclear nucleic acid-binding protein C1D [Mustela putorius furo]
Length = 137
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 71/133 (53%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 11 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 63
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 64 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKAA-KLDRGAASRFVKNALWEP 122
Query: 120 -PESDTPCDKKTK 131
P++ + K K
Sbjct: 123 KPKNASKVANKGK 135
>gi|383415145|gb|AFH30786.1| nuclear nucleic acid-binding protein C1D [Macaca mulatta]
Length = 141
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRIYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P + + K K
Sbjct: 126 KPRNASKVANKGK 138
>gi|119620292|gb|EAW99886.1| nuclear DNA-binding protein, isoform CRA_b [Homo sapiens]
Length = 194
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 23/142 (16%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 67 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 119
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 120 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 178
Query: 120 PESDTPCDKKTKDIPPVSKKTK 141
K+K+ V+ K K
Sbjct: 179 ---------KSKNASKVANKGK 191
>gi|1185125|emb|CAA64844.1| C1D protein [Mus musculus]
Length = 141
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 20 LESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--S 73
LES + + +++K + AV KL ++ + DL+ Y +NS++++ L + V+
Sbjct: 21 LESSLGAVDDMLKTMMAVSRNELLQKLDPLEQAKVDLVSAYTLNSMFWVYLATQGVNPKE 80
Query: 74 DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTP 125
VK EL+RI+ M + K+ DK +LD+ A+ RFV+ ALW P TP
Sbjct: 81 HPVKQELERIRVYMNRVKEITDKKKA-AKLDRGAASRFVKKALWEPKRKSTP 131
>gi|91088177|ref|XP_972343.1| PREDICTED: similar to CG8928 CG8928-PA [Tribolium castaneum]
gi|270012131|gb|EFA08579.1| hypothetical protein TcasGA2_TC006234 [Tribolium castaneum]
Length = 139
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 73/130 (56%), Gaps = 11/130 (8%)
Query: 19 DLESLVDEISEIIKQVQAVD-FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDF 75
+ S V++I +II+ + D + KL +K++ DL + Y +N+L+++ L+ K D
Sbjct: 18 NFHSSVEKIEKIIEISSSPDIYDKLTTKEKVDYDLFMAYTLNTLFWLYLKTKGEDPTKSE 77
Query: 76 VKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTKDIPP 135
+K +L R+++ M K K+ ++ + PR+D A+ RF+++ + +S TP + P
Sbjct: 78 IKNQLNRVKQYMVKAKEAHERQVLRPRIDCGAAGRFIKHGI-NYKDSGTPEE-------P 129
Query: 136 VSKKTKFDAD 145
+KK KF D
Sbjct: 130 PNKKMKFSDD 139
>gi|449279651|gb|EMC87186.1| Nuclear nucleic acid-binding protein C1D [Columba livia]
Length = 146
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 24/144 (16%)
Query: 2 TLNLIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSL 61
+L +DE+L ++ SE+++++ ++ KL DL+ +Y +NS+
Sbjct: 25 SLGSVDEMLKTMMSVSR---------SELLQKLDPLEQAKL--------DLVSVYTLNSM 67
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + ++ VK EL+RI+ M K K+ DK +L+K A+ RFVRNALW P
Sbjct: 68 FWVYLATQGINPKEHPVKQELERIRTYMNKVKEIADKKKA-SKLNKGAASRFVRNALWEP 126
Query: 120 PESDTPCDKKTKDIPPVSKKTKFD 143
+T + +K P KK K D
Sbjct: 127 ---NTENEHSSK-TPAKGKKRKTD 146
>gi|312383501|gb|EFR28566.1| hypothetical protein AND_03378 [Anopheles darlingi]
Length = 150
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 72/124 (58%), Gaps = 10/124 (8%)
Query: 13 FINSQHDLESLVDEISEIIKQVQAVDFTKLPN---DKKIEADLLVLYAINSLYFINLRI- 68
FI L+ +++I + +K V D+ K ++K+ D + Y++NSL++++ ++
Sbjct: 19 FIRKDEKLQQTIEKIGKCLK-VACEDYDKYHQFSIEEKVLYDNYITYSVNSLFWMHRKLT 77
Query: 69 -KHVDSDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCD 127
K D+D +K EL++++ M + K+ KD T P+LD+ A+KRF+R L+ ++ P
Sbjct: 78 GKMEDNDEIKHELEKVRSVMVRMKEIKDNAT-KPQLDRKAAKRFIRAGLY---DAQQPHG 133
Query: 128 KKTK 131
KK K
Sbjct: 134 KKPK 137
>gi|348566609|ref|XP_003469094.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Cavia
porcellus]
Length = 141
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 14/120 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTLMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ +K +LDK A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITEKKKA-GKLDKGAASRFVKNALWEP 125
>gi|355565742|gb|EHH22171.1| hypothetical protein EGK_05390 [Macaca mulatta]
Length = 141
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E +K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDETLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRIYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
Query: 120 -PESDTPCDKKTK 131
P + + K K
Sbjct: 126 KPRNASKVANKGK 138
>gi|357612281|gb|EHJ67900.1| hypothetical protein KGM_10643 [Danaus plexippus]
Length = 144
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 68/112 (60%), Gaps = 5/112 (4%)
Query: 12 KFINSQHDLESLVDEISEIIKQVQAV--DFTKLPNDKKIEADLLVLYAINSLYFINLRIK 69
+++N DL+ + ++ +++ ++ + + K+ +IE DL + + +NSL ++ LRI+
Sbjct: 15 EYVNKCEDLKENLMDLQKVLDKLLPLKQHYEKMSLPAQIELDLFLAFTLNSLQWVTLRIQ 74
Query: 70 HVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
VD + +K EL R++ M K+K+ KD++ P +D A KRF+R+ L+ P
Sbjct: 75 GVDPTTHPIKDELLRVKAAMLKWKEVKDRVK-RPTVDLQAVKRFIRSGLYDP 125
>gi|148227312|ref|NP_001089806.1| nuclear nucleic acid-binding protein C1D [Xenopus laevis]
gi|123900357|sp|Q3KPR1.1|C1D_XENLA RecName: Full=Nuclear nucleic acid-binding protein C1D
gi|76779648|gb|AAI06602.1| MGC131377 protein [Xenopus laevis]
Length = 145
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 25/138 (18%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
I E L F NS ++ ++ ++ SE++++++ ++ KL DL+ Y +NS
Sbjct: 15 IHEYLMAFENSVGSVDEMLKKMMSVSRSELLQKIEPLEQAKL--------DLVSAYTLNS 66
Query: 61 LYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWT 118
L++I L + ++ VK EL+RI+ M + K+ D+ RLDK A++RF+++AL
Sbjct: 67 LFWIYLTTQGINPKEHPVKEELERIRGYMNRVKEITDRKKAA-RLDKGAARRFIKHAL-- 123
Query: 119 PPESDTPCDKKTKDIPPV 136
CD +++ PP
Sbjct: 124 -------CDPTSEEAPPA 134
>gi|170575203|ref|XP_001893143.1| nuclear DNA-binding protein C1D [Brugia malayi]
gi|158601000|gb|EDP38021.1| nuclear DNA-binding protein C1D, putative [Brugia malayi]
Length = 205
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 43 PNDKKIEADLLVLYAINSLYFINLRI---KHVDSDFVKVELKRIQETMKKFKQTKDKLTI 99
P +K+E DL+ ++ INSLY++ L K +++ ++ E+ R +E M + KQ +++ T
Sbjct: 42 PPLEKLEIDLMSVFVINSLYWMLLCTHGQKPRENEVLQNEIDRTKEYMGRLKQLEERKTA 101
Query: 100 MPRLDKDASKRFVRNALWTP 119
P L++ A+K FVRNALW P
Sbjct: 102 -PCLNQRAAKSFVRNALWEP 120
>gi|308322039|gb|ADO28157.1| nuclear nucleic acid-binding protein c1d [Ictalurus furcatus]
Length = 143
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
I E L+ F++S +++++ + + K D KL ++ + DL+ +YA+NSL+++
Sbjct: 14 IAEYLTGFVSSVSSVQNVIQTLMSVSKG----DSLKLGPLEQAKLDLMSVYALNSLFWMY 69
Query: 66 LRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
+ V+ +K EL+RI+ M + K+ DK LDKDA+ RFVRNALW
Sbjct: 70 SVTQGVNPKDHGIKQELERIRTNMNRIKEITDKKQATC-LDKDAASRFVRNALW 122
>gi|395860506|ref|XP_003802553.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 1
[Otolemur garnettii]
gi|395860508|ref|XP_003802554.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 2
[Otolemur garnettii]
Length = 141
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 14/120 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL + ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLKTMMSVSRNELLQKLDSLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYSATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEP 125
>gi|109108413|ref|XP_001094383.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Macaca
mulatta]
Length = 141
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 15/134 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E +K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDETLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHV--DSDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+++ L + V VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 67 FWVYLATQGVTPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWKP 125
Query: 120 -PESDTPCDKKTKD 132
P + + K K
Sbjct: 126 KPRNASKVANKGKS 139
>gi|449495549|ref|XP_004176203.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 2
[Taeniopygia guttata]
Length = 165
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 20 LESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--S 73
E + + E++K + +V KL ++ + DL+ +Y +NS++++ L + ++
Sbjct: 41 FEKSLGSVDEMLKTMMSVSRNELLQKLDPLEQAKLDLVSVYTLNSMFWVYLATQGINPKE 100
Query: 74 DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
VK EL+RI+ M K K+ DK +LDK A+ RFV+NALW P
Sbjct: 101 HPVKQELERIRTYMNKVKEIADKKKA-SKLDKGAASRFVKNALWEP 145
>gi|301093092|ref|XP_002997395.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262110793|gb|EEY68845.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 141
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 5 LIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTK-LPNDKKIEADLLVLYAINSLYF 63
+ D+ + F + + L S V+E + KQ DFT+ L ++ + + + Y IN+L F
Sbjct: 1 MSDQAVEAFGSVEQTL-SAVEEHLAVFKQTSMEDFTETLRPLQRAKVQVSLAYTINALLF 59
Query: 64 INLRIKHVDSD-----FVKVELKRIQETMKKFKQTKDKLTIMPRL--DKDASKRFVRNAL 116
+ L+ + V S VK EL+R++ +KK K T++ LT P+L DKDASKRF+ NAL
Sbjct: 60 VFLKTQGVSSKDIRQTHVKQELERVKAFIKKIKDTEE-LTKGPKLVLDKDASKRFIHNAL 118
Query: 117 WT 118
+
Sbjct: 119 SS 120
>gi|126304383|ref|XP_001382144.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like
[Monodelphis domestica]
Length = 142
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 17/134 (12%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
I + LS F NS ++ ++ + +E+++++ ++ KL DL+ Y +NS
Sbjct: 15 IHDYLSAFENSLRSVDEMLKTMMSVSRNELLQKLDPLEQAKL--------DLVSAYTLNS 66
Query: 61 LYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW- 117
++++ L + V+ VK E+ RI+ M + K+ DK + +LDK A+ RFVRNALW
Sbjct: 67 MFWVYLATQGVNPKEHPVKQEIDRIRIYMNRVKEITDK-KMAAKLDKGAASRFVRNALWE 125
Query: 118 TPPESDTPCDKKTK 131
PE + K K
Sbjct: 126 AKPEKGSKSSNKGK 139
>gi|410900850|ref|XP_003963909.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Takifugu
rubripes]
Length = 155
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
ID+ L+ F +S ++++++++ I + + L K DL+ +Y +NSL+++
Sbjct: 14 IDDQLTSFNSSVSSVKTMLEKLMSIPRNEEPQKLNPLDQAK---LDLMSVYTLNSLFWMY 70
Query: 66 LRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESD 123
L + V+ +K EL+RI+ M + K+ +K RLDK A+ RFVR+AL+ P E D
Sbjct: 71 LVTQGVNPREHGIKQELERIRLCMNRVKEITEKKKAA-RLDKGAAARFVRSALYEPEEKD 129
>gi|213515536|ref|NP_001135361.1| nuclear nucleic acid-binding protein C1D [Salmo salar]
gi|209736740|gb|ACI69239.1| Nuclear nucleic acid-binding protein C1D [Salmo salar]
Length = 213
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 67/119 (56%), Gaps = 16/119 (13%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
I+E L+ F +S + ++V I +E+++++ ++ KL DL+ Y++NS
Sbjct: 14 IEEQLTGFESSVGTVNNMVQTILSMPRNELVQKLDPLEQAKL--------DLMSAYSLNS 65
Query: 61 LYFINLRIKHVDS--DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
L+++ L + ++ +K EL+RI+ M + K+ D+ RL+K A RF+RNALW
Sbjct: 66 LFWMYLVTQGINPKEHAIKQELERIRTYMNRVKEITDRRKAA-RLNKAAMSRFLRNALW 123
>gi|47224695|emb|CAG00289.1| unnamed protein product [Tetraodon nigroviridis]
Length = 142
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
ID+ L+ F +S ++++++++ I + Q L K DL+ +Y +NSL+++
Sbjct: 14 IDDQLTNFDSSVSSVKTMLEKLMSIPRNEQPQKLDPLDQAK---LDLMSVYTLNSLFWMY 70
Query: 66 LRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESD 123
L + V+ +K EL+RI+ M + K+ +K RLDK A+ RF+R+AL+ P E D
Sbjct: 71 LVTQGVNPREHGIKQELERIRTCMNRVKEITEKKKAA-RLDKGAAARFLRSALYDPEEKD 129
Query: 124 T 124
Sbjct: 130 A 130
>gi|170575321|ref|XP_001893191.1| nuclear DNA-binding protein C1D [Brugia malayi]
gi|158600937|gb|EDP37980.1| nuclear DNA-binding protein C1D, putative [Brugia malayi]
Length = 141
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 43 PNDKKIEADLLVLYAINSLYFINLRI---KHVDSDFVKVELKRIQETMKKFKQTKDKLTI 99
P +K+E DL+ ++ INSLY++ L K +++ ++ E+ R +E M + KQ +++ T
Sbjct: 42 PPLEKLEIDLMSVFVINSLYWMLLCTHGQKPKENEVLQNEIDRTKEYMGRLKQLEERKTA 101
Query: 100 MPRLDKDASKRFVRNALWTP 119
P L++ A+K FVRNALW P
Sbjct: 102 -PCLNQRAAKSFVRNALWEP 120
>gi|149640826|ref|XP_001512500.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 1
[Ornithorhynchus anatinus]
gi|345329076|ref|XP_003431331.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 2
[Ornithorhynchus anatinus]
gi|345329078|ref|XP_003431332.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like isoform 3
[Ornithorhynchus anatinus]
Length = 142
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 16/121 (13%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
I + LS F NS ++ ++ + +E+++++ ++ KL DL+ Y +NS
Sbjct: 15 IHDYLSAFENSLGSVDDMLKTMMSVSRNELLQKLDPLEQAKL--------DLVSAYTLNS 66
Query: 61 LYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWT 118
+++ L + V+ VK EL+RI+ M + K+ DK +LDK A+ RFVRNALW
Sbjct: 67 MFWAYLATQGVNPKEHPVKQELERIRTYMNRVKEITDKKKA-SKLDKGAASRFVRNALWE 125
Query: 119 P 119
P
Sbjct: 126 P 126
>gi|224046997|ref|XP_002199868.1| PREDICTED: nuclear nucleic acid-binding protein C1D isoform 1
[Taeniopygia guttata]
Length = 148
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 20 LESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--S 73
E + + E++K + +V KL ++ + DL+ +Y +NS++++ L + ++
Sbjct: 24 FEKSLGSVDEMLKTMMSVSRNELLQKLDPLEQAKLDLVSVYTLNSMFWVYLATQGINPKE 83
Query: 74 DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
VK EL+RI+ M K K+ DK +LDK A+ RFV+NALW P
Sbjct: 84 HPVKQELERIRTYMNKVKEIADKKKA-SKLDKGAASRFVKNALWEP 128
>gi|340379068|ref|XP_003388049.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like
[Amphimedon queenslandica]
Length = 165
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 52 LLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTI-MPRLDKDAS 108
L + Y INSL+++ L + ++ + +K EL+R+Q+ M + ++L +PR+DK A+
Sbjct: 77 LTLCYTINSLFWVYLTTQGINPKTHGIKHELERVQKYMNQANIINERLKGEVPRVDKGAA 136
Query: 109 KRFVRNALW 117
KRFV+NALW
Sbjct: 137 KRFVKNALW 145
>gi|108861845|gb|ABG21824.1| nuclear DNA-binding protein-like protein [Schistosoma mansoni]
Length = 140
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
I L F + D+E LV++IS T++ + I+ DL + YA N+L+F+
Sbjct: 14 ISAQLVSFSEATDDVEQLVNKISNFSNDSN----TEVSDLDAIKTDLSLCYAFNALFFMY 69
Query: 66 LRIKHVD--SDFVKVELKRIQETMKKFKQTKDK-LTIMPRLDKDASKRFVRNALWTPPES 122
LR V+ S + EL R+ +K+ + +K + +LDK+A+ RFV++ALW +
Sbjct: 70 LRCNGVETQSHPIMQELDRVMNALKRCRSLVEKEGSARLKLDKEATTRFVKHALWKSAHT 129
Query: 123 DT 124
T
Sbjct: 130 KT 131
>gi|417396161|gb|JAA45114.1| Putative dna-binding protein c1d involved in regulation of
double-strand break repair [Desmodus rotundus]
Length = 141
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDF-TKLPNDKKIEADLLVLYAINSLYFI 64
I E LS F NS VD++ +I+ V + KL + + DL+ Y +NS++++
Sbjct: 14 IHEYLSAFENSI----GAVDDMLKIMMSVFRNELLQKLGLLEHVIVDLVSAYTLNSMFWV 69
Query: 65 NLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP-PE 121
L + V+ VK EL+RI+ M + K+ DK +LD+ A+ RFV+NALW P P+
Sbjct: 70 YLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-AKLDRGAASRFVKNALWEPKPK 128
Query: 122 SDTPCDKKTKD 132
+ + K K
Sbjct: 129 NASKVASKGKS 139
>gi|221221978|gb|ACM09650.1| Nuclear nucleic acid-binding protein C1D [Salmo salar]
Length = 240
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 66/117 (56%), Gaps = 16/117 (13%)
Query: 8 ELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLY 62
E L+ F +S + ++V + +E+++++ ++ KL DL+ Y++NSL+
Sbjct: 16 EQLTGFESSVGAVNNMVQTVISMPRNELVQRLDPLEQAKL--------DLMSAYSLNSLF 67
Query: 63 FINLRIKHVDS--DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
++ L + ++ +K EL+RI+ M + K+ D+ RL+K A+ RF+RNALW
Sbjct: 68 WMYLVTQGINPKEHGIKQELERIRMYMNRVKEITDRRKAA-RLNKAAASRFLRNALW 123
>gi|307180080|gb|EFN68148.1| Nuclear nucleic acid-binding protein C1D [Camponotus floridanus]
Length = 144
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 79/133 (59%), Gaps = 12/133 (9%)
Query: 10 LSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIK 69
L +F ++ ++ +V+ IS+ + + KL N KI+ +LL+ Y++NSL+++ LR K
Sbjct: 18 LQQFSDAAFKIQDVVESISD------PLLYEKLSNVNKIKYNLLLSYSLNSLFWMYLRAK 71
Query: 70 HVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCD 127
+D ++ E +R+++ M + KQ D+ T+MPR++KD + R VRN+LW + +
Sbjct: 72 GIDPSKHRIRSENERVKKAMMRAKQIHDRNTLMPRINKDVAMRLVRNSLWESKQKEIESK 131
Query: 128 KK----TKDIPPV 136
+K +KD+ P
Sbjct: 132 EKETENSKDLLPT 144
>gi|221220686|gb|ACM09004.1| Nuclear nucleic acid-binding protein C1D [Salmo salar]
Length = 200
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 67/119 (56%), Gaps = 16/119 (13%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
I E L+ F +S + ++V + +E+++++ ++ KL DL+ Y++NS
Sbjct: 14 IVEQLTGFESSVGAVNNMVQTVISMPRNELVQRLDPLEQAKL--------DLMSAYSLNS 65
Query: 61 LYFINLRIKHVDS--DFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
L+++ L + ++ +K EL+RI+ M + K+ D+ RL+K A+ RF+RNALW
Sbjct: 66 LFWMYLVTQGINPKEHGIKQELERIRMYMNRVKEITDRRKAA-RLNKAAASRFLRNALW 123
>gi|395841419|ref|XP_003793535.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Otolemur
garnettii]
Length = 156
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 5 LIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFI 64
++D + ++ ++ V S ++V A+ KL ++ + DL+ Y +NS++++
Sbjct: 25 VVDVIGARQLSVGRSRRPRVTAGSSGQRKVSALLLWKLDPLEQAKVDLVSAYTLNSMFWV 84
Query: 65 NLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
L + V+ VK EL R+Q M + K+ DK +LD+ A+ RFV+NALW P
Sbjct: 85 YLATQGVNPKEHPVKQELVRVQLXMNRVKEITDK-KKAGKLDRGAASRFVKNALWEP 140
>gi|395507923|ref|XP_003758267.1| PREDICTED: nuclear nucleic acid-binding protein C1D [Sarcophilus
harrisii]
Length = 142
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 16/119 (13%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
I + LS F NS ++ ++ + +E+++++ ++ KL DL+ Y +NS
Sbjct: 15 IHDYLSTFDNSLRSVDEMLKTMMSVSRNELLQKLDPLEQAKL--------DLVSAYTLNS 66
Query: 61 LYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
++++ L + V+ VK E+ RI+ M + K+ DK + +LDK A+ RFVRNALW
Sbjct: 67 MFWVYLATQGVNPKEHPVKQEIDRIRIYMNRVKEITDK-KMAAKLDKGAASRFVRNALW 124
>gi|119606373|gb|EAW85967.1| hCG2017386, isoform CRA_a [Homo sapiens]
gi|119606374|gb|EAW85968.1| hCG2017386, isoform CRA_a [Homo sapiens]
Length = 111
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 51 DLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDAS 108
DL+ Y +NS++++ L + V+ VK EL+RI+ M + K+ DK +LD+ A+
Sbjct: 26 DLVSAYTLNSMFWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDKKKA-GKLDRGAA 84
Query: 109 KRFVRNALWTP-PESDTPCDKKTKD 132
RFV+NALW P P++ + K K
Sbjct: 85 SRFVKNALWEPKPKNASKVANKGKS 109
>gi|346465387|gb|AEO32538.1| hypothetical protein [Amblyomma maculatum]
Length = 133
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 20/93 (21%)
Query: 47 KIEADLLVLYAINSLYFINLRIKHVDSDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKD 106
K DL +LY++NSL+ R++E M + KQ DK P+LD
Sbjct: 60 KARLDLTLLYSLNSLF-----------------XXRVKEYMVRAKQIADKAK-APKLDAG 101
Query: 107 ASKRFVRNALWTPPESDTPCDKKTKDIPPVSKK 139
A++RF+R++LWTP SD +K+ PP ++
Sbjct: 102 AAQRFIRSSLWTP--SDDSASQKSSQEPPRKRR 132
>gi|55742551|ref|NP_001007060.1| nuclear nucleic acid-binding protein C1D [Danio rerio]
gi|82180578|sp|Q5XJ97.1|C1D_DANRE RecName: Full=Nuclear nucleic acid-binding protein C1D
gi|54035595|gb|AAH83407.1| C1D nuclear receptor co-repressor [Danio rerio]
Length = 148
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 51 DLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDAS 108
DL+ YA+NS++++ L + V+ +K EL+RI+ M K K+ D+ +DK+A+
Sbjct: 56 DLMSAYALNSMFWMYLVTQGVNPKDHPIKQELERIRTYMNKVKEITDRRKA-AHIDKEAA 114
Query: 109 KRFVRNALW 117
RFVRNALW
Sbjct: 115 SRFVRNALW 123
>gi|348501630|ref|XP_003438372.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like
[Oreochromis niloticus]
Length = 150
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 70/119 (58%), Gaps = 16/119 (13%)
Query: 6 IDELLSKFINSQHDLESLVDEI-----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINS 60
IDE L+ F +S ++++++++ +++++++ +D KL DL+ Y +NS
Sbjct: 14 IDEQLTCFDSSVTSVKTILEQLMSMPRNDLLQKLDPLDQAKL--------DLMSAYTLNS 65
Query: 61 LYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
L+++ L + ++ +K EL+RI+ M + K+ DK RLDK A+ RFVR+AL+
Sbjct: 66 LFWMYLVTQGINPREHGIKQELERIRTYMNRVKEITDKKKA-ARLDKGAAARFVRSALY 123
>gi|62858355|ref|NP_001016424.1| C1D nuclear receptor corepressor [Xenopus (Silurana) tropicalis]
Length = 145
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 72/137 (52%), Gaps = 25/137 (18%)
Query: 2 TLNLIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSL 61
++ +DE+L+K ++ SE++++++ ++ KL DL+ Y +NSL
Sbjct: 25 SVGSVDEMLNKMMSVSR---------SELLQKIEPLEQAKL--------DLVSAYTLNSL 67
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
++I L + ++ VK EL+RI+ M + K+ D+ +LDK A++RF+++AL P
Sbjct: 68 FWIYLTTQGINPKEHPVKEELERIRSYMNRVKEITDRKKA-AKLDKGAARRFIKHALCDP 126
Query: 120 PESD-----TPCDKKTK 131
+ T C K K
Sbjct: 127 TSEEASTAKTDCKAKKK 143
>gi|198434913|ref|XP_002128345.1| PREDICTED: similar to nuclear DNA-binding protein [Ciona
intestinalis]
Length = 187
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 63/110 (57%), Gaps = 12/110 (10%)
Query: 11 SKFINSQHDLESLV-DEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIK 69
SK ++ L+ L ++ ++ ++++ ++ KL DL+ YA+NS Y+ L
Sbjct: 19 SKLSTAEKTLQPLFKNQRCDLTREMEPLEIAKL--------DLVTAYAVNSFYWTYLIAS 70
Query: 70 HVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
V+ + VK EL RI+ M K + +++ PRL+K+A+KRF+R+A++
Sbjct: 71 GVNPKTHPVKQELDRIKTYMGKVNEIENRKNA-PRLEKEAAKRFIRSAMF 119
>gi|307201315|gb|EFN81162.1| Nuclear nucleic acid-binding protein C1D [Harpegnathos saltator]
Length = 139
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 63 FINLRIKHVDSDF--VKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
++ LR + +D +K++ +R+++ M + KQ +D+ T+MP ++K+A+KRFVR+ LW P
Sbjct: 65 WMYLRAEGIDPSKHPIKLQNERLKKAMLRAKQIEDRNTLMPHINKEAAKRFVRSGLWEP 123
>gi|29840992|gb|AAP06005.1| similar to GenBank Accession Number BC016284 nuclear DNA-binding
protein in Homo sapiens [Schistosoma japonicum]
gi|226469120|emb|CAX70039.1| Exosome-associated,domain-containing protein [Schistosoma
japonicum]
gi|226486596|emb|CAX74375.1| Exosome-associated,domain-containing protein [Schistosoma
japonicum]
gi|226486598|emb|CAX74376.1| Exosome-associated,domain-containing protein [Schistosoma
japonicum]
Length = 141
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIK----QVQAVDFTKLPNDKKIEADLLVLYAINSL 61
I L F + D+E LV++IS +V +D ++++L + YA N+L
Sbjct: 14 ISSQLVSFSEATDDVEQLVNKISSFSNNSSNEVSGLD--------TVKSELSLCYAFNAL 65
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDK-LTIMPRLDKDASKRFVRNALWT 118
+F+ LR V+ S + EL R+ +K+ + ++ ++ LDK+A+ RFV++ALW
Sbjct: 66 FFMYLRCNGVETQSHPIMQELDRVMNALKRCRSLVEREVSARLTLDKEATTRFVKHALWK 125
Query: 119 PPESDT 124
+ T
Sbjct: 126 SAHTKT 131
>gi|301763070|ref|XP_002916955.1| PREDICTED: LOW QUALITY PROTEIN: nuclear nucleic acid-binding
protein C1D-like [Ailuropoda melanoleuca]
Length = 144
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 14/120 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPND----KKIEADLLVLYAINSL 61
I E LS F NS V + E++K + V +L ++ + DL+ Y +NS+
Sbjct: 17 IHEYLSTFENS-------VGAVDEMLKTMMXVSTNELLQKFHFFEQAKVDLVSAYTLNSM 69
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
+ + L + V+ VK EL+RI+ M + K+ K +L++ A+ R V+NALW P
Sbjct: 70 FXVYLATQGVNPKEHPVKXELERIRVYMNRVKEITLKKKA-GKLERGAASRLVKNALWEP 128
>gi|291234591|ref|XP_002737233.1| PREDICTED: nuclear DNA-binding protein-like [Saccoglossus
kowalevskii]
Length = 157
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 47 KIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLD 104
K + DL+ YA+N++++I L ++ V+ +K EL RI+ M + K DK RLD
Sbjct: 51 KAKIDLVAAYAMNAMFWIYLTMQGVNPREHPIKQELDRIRNYMNRIKDITDKKKAA-RLD 109
Query: 105 KDASKRFVRNALWTP 119
K A+ RF++++L P
Sbjct: 110 KGAAARFIKHSLAAP 124
>gi|440804197|gb|ELR25074.1| Sas10/Utp3/C1D family protein [Acanthamoeba castellanii str. Neff]
Length = 172
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Query: 52 LLVLYAINSLYFINLRIKHVD-SDF-VKVELKRIQETMKKFKQ-TKDKLTIMPRLDKDAS 108
+L+ YA+N+L++I L+ + VD +D VK E++R++E ++K KQ T+ K T LDK A+
Sbjct: 56 VLLAYALNTLFYIYLKTQGVDPADHPVKDEIERVKEYIQKLKQLTQPKETPSMVLDKQAA 115
Query: 109 KRFVRNAL 116
RF+++A+
Sbjct: 116 NRFIQHAV 123
>gi|402577497|gb|EJW71453.1| hypothetical protein WUBG_17639 [Wuchereria bancrofti]
Length = 109
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 55 LYAINSLYFINLRIKHV----DSDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKR 110
++ INSLY++ L H +++ ++ E+ R +E M + KQ +++ P L++ A+K
Sbjct: 3 VFVINSLYWM-LLCTHGQKPKENEVLQNEINRTKEYMGRLKQLEER-KAAPCLNQRAAKS 60
Query: 111 FVRNALWTPPESD 123
FVRNALW P +
Sbjct: 61 FVRNALWEPKQQQ 73
>gi|167517509|ref|XP_001743095.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778194|gb|EDQ91809.1| predicted protein [Monosiga brevicollis MX1]
Length = 171
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 51 DLLVLYAINSLYFINLRIKHVDS--DFVKVELKRIQETMKKFKQ-TKDKLTIMPRLDKDA 107
DLL+ Y NSL+++ L + VD V+ EL R+++ M K K +D L+K+A
Sbjct: 50 DLLLAYNANSLFWMFLSSRGVDPAKHPVRAELGRVRDYMMKIKGLERDPSAARSNLNKEA 109
Query: 108 SKRFVRNAL 116
++RFVR+AL
Sbjct: 110 AERFVRHAL 118
>gi|326426954|gb|EGD72524.1| hypothetical protein PTSG_00547 [Salpingoeca sp. ATCC 50818]
Length = 154
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 20 LESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--S 73
L+ + + I++++ A D ++L + + DL+ Y +NSL+++ L + +D +
Sbjct: 7 LDEALQRVDPIVRELTAADPAELRSRLTAVESAKMDLMTAYTMNSLFWMFLSSRGIDPKT 66
Query: 74 DFVKVELKRIQETMKKFKQTKD---KLTIMPRLDKDASKRFVRNAL 116
V+ EL RI+E M + ++ ++ + P ++K A+KRFV+ AL
Sbjct: 67 HPVRKELDRIKEYMARVQKAENPDARDEAQPSVNKAAAKRFVKAAL 112
>gi|378731273|gb|EHY57732.1| hypothetical protein HMPREF1120_05759 [Exophiala dermatitidis
NIH/UT8656]
Length = 319
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 69/120 (57%), Gaps = 13/120 (10%)
Query: 3 LNLIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLY 62
++L+D+L + +++ L + + +I+ A +LP + + ++L++Y+I SL
Sbjct: 7 ISLVDQL-------EDNIDDLEENLQPLIEGALATTAKRLPLLDRAKLNVLLVYSIESLI 59
Query: 63 FINLRIKHVDSDFVKV--ELKRIQETMKKFK--QTKDKLTIMPR--LDKDASKRFVRNAL 116
F L+++ VD+ V EL R+++ +K K +T + P+ LDK+A+ RF+++AL
Sbjct: 60 FSYLKLQGVDAKDHAVFRELTRVKQYFEKIKEAETGPETETRPKATLDKEAAGRFIKHAL 119
>gi|452986760|gb|EME86516.1| hypothetical protein MYCFIDRAFT_210517 [Pseudocercospora fijiensis
CIRAD86]
Length = 243
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 18 HDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVK 77
D++ L + I++ + +KLP K + +L YAI S+ F LR+ VD+
Sbjct: 13 GDVDDLQSALQPILQSALSASTSKLPLLDKAKLYVLATYAIESILFSYLRLNGVDAKNHP 72
Query: 78 V--ELKRIQETMKKFKQTKDKLTIMP--RLDKDASKRFVRNALWTPPESD---------- 123
+ EL R++E K K + + P RLD +A+ RF++ L + D
Sbjct: 73 IFQELNRVKEYFNKIKNV-EAVASGPSARLDTNAAGRFIKAGLSGNDKYDADRKERRGRE 131
Query: 124 -TPCDKKTKDIPPVSKKTKFDADGNVI---EETITIL 156
+K + I V K T+FD I EET+ ++
Sbjct: 132 RAGAKRKLEGI-GVGKHTRFDGIAKRIKAQEETVNVV 167
>gi|348669542|gb|EGZ09364.1| hypothetical protein PHYSODRAFT_522264 [Phytophthora sojae]
Length = 141
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 25/124 (20%)
Query: 2 TLNLIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSL 61
TL ++E L+ F Q+ +E V +S + ++ + + + Y IN+L
Sbjct: 15 TLAAVEEHLAVF--KQNSMEEFVAPLSPL---------------ERAKVQVSLAYTINAL 57
Query: 62 YFINLRIKHVD-----SDFVKVELKRIQETMKKFKQTKDKLTIMPRL--DKDASKRFVRN 114
F+ L+ + V VK EL R++ +KK K ++ L P+L DKDASKRF+ N
Sbjct: 58 LFVFLKTQGVSPKDIRQTHVKQELDRVKAFIKKIKDAEE-LAKGPKLVLDKDASKRFIHN 116
Query: 115 ALWT 118
AL +
Sbjct: 117 ALSS 120
>gi|391342717|ref|XP_003745662.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like
[Metaseiulus occidentalis]
Length = 142
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 8 ELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLR 67
EL K N L++L + ++ L + K DL + Y ++SL + +
Sbjct: 15 ELTEKVRNLHEKLQNLEKLLEPLLSSTALEAKESLDSADKARYDLSLCYGLSSLLWAYML 74
Query: 68 IKHVDSD--FVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
++ D +K EL R+++ M + +Q +D++ PR + RFVRNAL+ P
Sbjct: 75 VQGEDPKDTALKHELNRVRDYMTRVQQLEDRVK-RPRFAPGTASRFVRNALYDP 127
>gi|340519801|gb|EGR50039.1| predicted protein [Trichoderma reesei QM6a]
Length = 188
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 10/92 (10%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
++ L S+ + LE L+ +SE+ Q+ +D KL + + YAI SL F +
Sbjct: 11 VERLGSQLDGLEDALEPLLGNLSEMSSQLPLLDRAKLFS--------MAAYAIESLLFSS 62
Query: 66 LRIKHVDSD--FVKVELKRIQETMKKFKQTKD 95
L+I+ VD+ V ELKRIQ+ K K ++
Sbjct: 63 LKIQGVDAQNHAVFAELKRIQQYFAKIKAAEE 94
>gi|313231337|emb|CBY08452.1| unnamed protein product [Oikopleura dioica]
Length = 133
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Query: 20 LESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVK 77
L+S++ E+ E + Q+ + KLP+ ++ + DLL LY +NS+ ++ + +D +K
Sbjct: 22 LDSVMKEV-EKLTQLSQDEINKLPSLEQAKLDLLSLYTMNSMAWVYNTVNGIDPKQTALK 80
Query: 78 VELKRIQETMKKFKQTKDK---LTIMPRLDKDASKRFV 112
EL+R+Q +MKK + +DK LT+ D A+KR V
Sbjct: 81 DELQRVQVSMKKVQDIEDKKKRLTV----DSKAAKRIV 114
>gi|225717782|gb|ACO14737.1| Nuclear nucleic acid-binding protein C1D [Caligus clemensi]
Length = 134
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 45 DKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPR 102
++K +L+ +A+NSL +++LR K V+ +KVEL RI++ M + K KDK +
Sbjct: 45 EEKARLELVSAFALNSLVWVSLRTKGVNPKGTQMKVELDRIKKGMLRLKDIKDKAR-RGK 103
Query: 103 LDKDASKRFVRNALWTPP 120
++ A++RF++ + P
Sbjct: 104 INIPAARRFIKAGIGRNP 121
>gi|225719508|gb|ACO15600.1| Nuclear nucleic acid-binding protein C1D [Caligus clemensi]
Length = 134
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 45 DKKIEADLLVLYAINSLYFINLRIKHVDSD--FVKVELKRIQETMKKFKQTKDKLTIMPR 102
++K +L+ +A+NSL +++LR K V+ +KVEL RI++ M + K KDK +
Sbjct: 45 EEKARLELVSAFALNSLVWVSLRTKGVNPKDTQMKVELDRIKKGMLRLKDIKDKAR-RGK 103
Query: 103 LDKDASKRFVRNALWTPP 120
++ A+KRF++ + P
Sbjct: 104 INIPAAKRFIKAGIGRNP 121
>gi|351708041|gb|EHB10960.1| Nuclear nucleic acid-binding protein C1D [Heterocephalus glaber]
Length = 141
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E+++ + +V KL ++ + DL+ Y++ S+
Sbjct: 14 IHEYLSTFENS-------IGAVDEMLRAMMSVSRNDLLQKLDPLEQAKVDLVSAYSLTSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNAL 116
+++ L V VK EL+RI+ M + K+ DK +LD A+ RFV++AL
Sbjct: 67 FWVYLTTHGVSPKEHPVKQELERIKVYMNRVKEITDKKKA-GKLDPGAASRFVKSAL 122
>gi|115402595|ref|XP_001217374.1| predicted protein [Aspergillus terreus NIH2624]
gi|114189220|gb|EAU30920.1| predicted protein [Aspergillus terreus NIH2624]
Length = 230
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 24 VDEISEIIKQVQAVDFT----KLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV- 78
VD++ EI+ + T KLP K + +LV YA+ SL F LR+ V++ V
Sbjct: 17 VDDLEEILGPILKSSLTETSKKLPVLDKAKFHVLVTYALESLVFSYLRLHGVNAKEHPVF 76
Query: 79 -ELKRIQETMKKFK--QTKDKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K +T+ + M +LDK+A+ RF+++ L
Sbjct: 77 RELTRVKQYFEKIKALETEPEQRTM-KLDKEAAGRFIKHGL 116
>gi|295663120|ref|XP_002792113.1| predicted protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279288|gb|EEH34854.1| predicted protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 323
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
D++ L + + + Q + K+P K + +LV YAI S+ F LR++ V++ V
Sbjct: 16 DIDDLEEALEPFLGQSLSSTTQKMPVLDKAKLHVLVTYAIESILFGYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + +K T+ +DK+A+ RF+++ L
Sbjct: 76 FKELTRVRQYFEKLKAAETVPEKRTM--SIDKEAAGRFIKHGL 116
>gi|453088139|gb|EMF16180.1| hypothetical protein SEPMUDRAFT_147816 [Mycosphaerella populorum
SO2202]
Length = 203
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 19 DLESLVDEISE----IIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSD 74
DL + +DE+ IIK + +KLP K + +L YAI S+ F LR+ VD+
Sbjct: 10 DLTTNIDELESALLPIIKTALSSTTSKLPLLDKAKLYVLATYAIESILFSYLRLHGVDAK 69
Query: 75 FVKV--ELKRIQETMKKFKQTKD-KLTIMPRLDKDASKRFVRNAL 116
V EL R++E K K + + +LD A+ RF+++ L
Sbjct: 70 AHPVFQELTRVKEYFNKIKTAETAGVGSKNKLDTSAAGRFIKHGL 114
>gi|358384967|gb|EHK22564.1| hypothetical protein TRIVIDRAFT_121171, partial [Trichoderma virens
Gv29-8]
Length = 181
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 19/115 (16%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
+++L S+ + LE L+ +SE+ Q+ +D KL + L YAI SL F +
Sbjct: 11 VEKLGSQLDKLEDALEPLLGNLSEMASQLPLLDRAKLFS--------LTAYAIESLLFSS 62
Query: 66 LRIKHVDSD--FVKVELKRIQETMKKFK-----QTKDKLTIMPRLDKDASKRFVR 113
++I+ D+ V ELKRIQ+ K K +TK LT+ +++A+ R ++
Sbjct: 63 IKIQGGDAQNHAVYAELKRIQQYFAKIKAAEEPETKRTLTV----NQEAAARILK 113
>gi|326476817|gb|EGE00827.1| hypothetical protein TESG_08121 [Trichophyton tonsurans CBS 112818]
Length = 284
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 20 LESLVDEISEIIKQVQAVDFT----KLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDF 75
LE +D+I E+++ + T KLP K + +L+ Y+I SL F LR+ VD+
Sbjct: 15 LEDSIDDIEEVLEPLLERGLTATAQKLPLLDKAKLHVLLSYSIESLIFSYLRLNDVDAKE 74
Query: 76 VKV--ELKRIQ---ETMKKFKQTKDKLTIMPRLDKDASKRFVRNAL 116
V EL R++ E +K + +K T+M LD A+ RF+++ L
Sbjct: 75 HPVFRELNRVRQYHEKIKTLEAPPEKRTMM--LDTQAAGRFIKHGL 118
>gi|341882780|gb|EGT38715.1| hypothetical protein CAEBREN_16412 [Caenorhabditis brenneri]
Length = 139
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 78 VELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTKDIPPVS 137
V KRI MK+ +D PR++K A+ FVRNA+W PE T + + P S
Sbjct: 84 VRTKRITNDMKEINLRQD----APRINKQAASNFVRNAVWEAPEQGT-----STETPQKS 134
Query: 138 KKTK 141
+K+K
Sbjct: 135 EKSK 138
>gi|302695661|ref|XP_003037509.1| hypothetical protein SCHCODRAFT_104382 [Schizophyllum commune H4-8]
gi|300111206|gb|EFJ02607.1| hypothetical protein SCHCODRAFT_104382, partial [Schizophyllum
commune H4-8]
Length = 294
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 20 LESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVK 77
L+ L E++ ++ + A L +K L+ Y I L FI L++ D + V
Sbjct: 19 LDKLETELAPLLDRPLAETLAGLEPIEKARLQTLLPYIIYDLSFIQLKVNGEDPRTHAVI 78
Query: 78 VELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K+ ++ P +DKDA+ RF+++A+
Sbjct: 79 PELDRVRQYFEKIKKVEESAPKPPTVDKDAAARFIKHAI 117
>gi|194894072|ref|XP_001978002.1| GG17933 [Drosophila erecta]
gi|190649651|gb|EDV46929.1| GG17933 [Drosophila erecta]
Length = 159
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Query: 6 IDELLSKFINSQHDLESLVDEI----SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSL 61
+D L K N QH L+S I +++ K + L +++I+ D ++Y ++L
Sbjct: 18 LDTSLQKDENMQHILKSFYSSIEVLEADMEKALALQAERTLTINEQIKLDSYLVYLNSTL 77
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWT 118
Y+I L+++ +D V +L R +E + + K+ D L PRLD A+KRF+ T
Sbjct: 78 YWIYLKLQGLDVSKHGVMHDLGRTKELLARDKEINDALAA-PRLDMQAAKRFIAAGTHT 135
>gi|308486960|ref|XP_003105676.1| hypothetical protein CRE_17933 [Caenorhabditis remanei]
gi|308255132|gb|EFO99084.1| hypothetical protein CRE_17933 [Caenorhabditis remanei]
Length = 138
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 81 KRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTKDIPPV 136
KR+ MK +D PR++K A+ FVRNALW PE T + T PPV
Sbjct: 85 KRVTADMKAINARQDA----PRINKTAAANFVRNALWEVPEQGTSTE--TAPDPPV 134
>gi|358393511|gb|EHK42912.1| hypothetical protein TRIATDRAFT_149578 [Trichoderma atroviride
IMI 206040]
Length = 178
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 10/93 (10%)
Query: 5 LIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFI 64
L+++L S+ + LE L+ +SE+ Q+ +D KL + L YAI SL F
Sbjct: 10 LVEKLDSQLDKLEDALEPLLGNLSEMASQLPLLDRAKLYS--------LTAYAIESLLFS 61
Query: 65 NLRIKHVDSD--FVKVELKRIQETMKKFKQTKD 95
+++++ D+ V ELKRIQ+ K K ++
Sbjct: 62 SMKVQGADAQNHAVYQELKRIQQYFAKIKAAEE 94
>gi|226294592|gb|EEH50012.1| predicted protein [Paracoccidioides brasiliensis Pb18]
Length = 324
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
D++ L + + + Q + K+P K + +LV YAI S+ F LR++ V++ V
Sbjct: 16 DIDDLEEALEPFLGQSLSSTTQKMPVLDKAKLHVLVTYAIESILFGYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + +K T +DK+A+ RF+++ L
Sbjct: 76 FKELTRVRQYFEKLKAAETVPEKRTTS--IDKEAAGRFIKHGL 116
>gi|392577623|gb|EIW70752.1| hypothetical protein TREMEDRAFT_61259 [Tremella mesenterica DSM
1558]
Length = 212
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 67/130 (51%), Gaps = 30/130 (23%)
Query: 27 ISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDF--VKVELKRIQ 84
S+ + +++++D K+ D+L+ Y I+ L +I L++K D V EL+RI+
Sbjct: 32 FSDTLDELESLDRAKM--------DILLAYTISDLLWIYLKMKGHDPSLHPVAGELERIR 83
Query: 85 ETMKKFK-------QTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTKDIPPVS 137
+K K Q K+K +D +A++RF+++ L PP CD ++P +
Sbjct: 84 TYYEKIKLVESGSEQRKNK------VDVNAARRFIKHHL--PPS----CDPTLDEMPGRA 131
Query: 138 KKTKF-DADG 146
++ +F ADG
Sbjct: 132 ERFRFVAADG 141
>gi|440633287|gb|ELR03206.1| hypothetical protein GMDG_01189 [Geomyces destructans 20631-21]
Length = 236
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 40 TKLPNDKKIEADLLVLYAINSLYFINLRIKHVDS--DFVKVELKRIQETMKKFKQTKDKL 97
+KLP K + +LV YA+ S+ F LR+ V + V +EL R+++ K K+ ++
Sbjct: 39 SKLPLLDKAKLYVLVTYAVESILFSYLRLNGVKAREHPVFLELTRVKQYFDKLKEAENPT 98
Query: 98 TIMPR--LDKDASKRFVRNAL 116
P L+K+A+ RF+R L
Sbjct: 99 PKQPGLALEKNAAGRFIRAGL 119
>gi|225685257|gb|EEH23541.1| predicted protein [Paracoccidioides brasiliensis Pb03]
Length = 260
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
D++ L + + + Q + K+P K + +LV YAI S+ F LR++ V++ V
Sbjct: 16 DIDDLEEALEPFLGQSLSSTTQKMPVLDKAKLHVLVTYAIESILFGYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + +K T+ +DK+A+ RF+++ L
Sbjct: 76 FKELTRVRQYFEKLKAAETVPEKRTMS--IDKEAAGRFIKHGL 116
>gi|310794065|gb|EFQ29526.1| Sas10/Utp3/C1D family protein [Glomerella graminicola M1.001]
Length = 178
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 13/98 (13%)
Query: 1 MTLNLIDELLSKFINSQHD-LESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAIN 59
MT +L E L I+S D L+ L+D + E+ ++ +D K+ L YAI
Sbjct: 6 MTHDL--EKLDSHIDSLEDALKPLIDGLPEMANELPLLDKAKM--------FALTAYAIE 55
Query: 60 SLYFINLRIKHVDS--DFVKVELKRIQETMKKFKQTKD 95
SL F +LR++ VD+ V ELKR+Q+ K K+ ++
Sbjct: 56 SLLFSSLRLQGVDAKDHQVMTELKRVQQYFGKIKKAEE 93
>gi|407918446|gb|EKG11717.1| Sas10/Utp3/C1D [Macrophomina phaseolina MS6]
Length = 285
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 12/114 (10%)
Query: 14 INSQHDLESLVDEI-------SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINL 66
++ Q +E+L D I +++ + +KLP K + LV YAI S+ F L
Sbjct: 4 VDLQPQVEALADNIDDLEEALGPLLRTALSSHASKLPLLDKAKLYTLVTYAIESILFSYL 63
Query: 67 RIKHVDS--DFVKVELKRIQETMKKFKQTKDKLTIMPR--LDKDASKRFVRNAL 116
+ V + V EL R+++ +K KQ ++ I P LDK A+ RF+R L
Sbjct: 64 SLNGVKAKEHAVFTELTRVRQYFQKIKQV-EEAPIKPNQSLDKAAANRFIRAGL 116
>gi|402220000|gb|EJU00073.1| hypothetical protein DACRYDRAFT_23587 [Dacryopinax sp. DJM-731 SS1]
Length = 233
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 54 VLYAINSLYFINLRIKHVDSDFVKV--ELKRIQETMKKFKQTKDKLTIMPRL--DKDASK 109
+ YAI+ L ++ L+IK VD++ V EL R++ KK + +++ +L DKDA+
Sbjct: 29 LAYAIHDLLWMYLKIKGVDANGHPVVQELTRLKAYFKKIQDAENQPAEQRKLAVDKDAAA 88
Query: 110 RFVRNAL 116
RF+ +AL
Sbjct: 89 RFINHAL 95
>gi|225555235|gb|EEH03527.1| exosome-associated family protein [Ajellomyces capsulatus G186AR]
Length = 249
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
+++ L D + ++ Q + K+P K + +L+ YAI SL F LR++ V++ V
Sbjct: 16 NIDDLEDVLEPLLGQPLSATTQKMPVMDKAKLHVLITYAIESLIFSYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + +K T +DK+A+ RF+++ L
Sbjct: 76 FKELTRVKQYFEKLKTVETVPEKRTTA--VDKEAAGRFIKHGL 116
>gi|240275179|gb|EER38694.1| exosome-associated family protein [Ajellomyces capsulatus H143]
Length = 249
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
+++ L D + ++ Q + K+P K + +L+ YAI SL F LR++ V++ V
Sbjct: 16 NIDDLEDVLEPLLGQPLSATTQKMPVMDKAKLHVLITYAIESLIFSYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + +K T +DK+A+ RF+++ L
Sbjct: 76 FKELTRVKQYFEKIKTVETVPEKRTTA--VDKEAAGRFIKHGL 116
>gi|325094540|gb|EGC47850.1| exosome-associated family protein [Ajellomyces capsulatus H88]
Length = 249
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
+++ L D + ++ Q + K+P K + +L+ YAI SL F LR++ V++ V
Sbjct: 16 NIDDLEDVLEPLLGQPLSATTQKMPVMDKAKLHVLITYAIESLIFSYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + +K T +DK+A+ RF+++ L
Sbjct: 76 FKELTRVKQYFEKIKTVETVPEKRTTA--VDKEAAGRFIKHGL 116
>gi|327260906|ref|XP_003215274.1| PREDICTED: nuclear nucleic acid-binding protein C1D-like [Anolis
carolinensis]
Length = 146
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 28 SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQE 85
SE+++++ ++ KL DL+ Y +NS++++ L + ++ VK EL+RI+
Sbjct: 42 SELLQKLDPLEQAKL--------DLVSAYTLNSMFWVYLATQGINPKEHPVKQELERIRT 93
Query: 86 TMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTKDIPPVSKKTK 141
M + K+ DK AS RF+RNAL+ P P K K P +KK K
Sbjct: 94 YMNRVKEIADKKKAAKLDKGAAS-RFLRNALYEP----KPQSKVAKKTPVPAKKKK 144
>gi|17537383|ref|NP_493965.1| Protein Y51H7C.7 [Caenorhabditis elegans]
gi|351063582|emb|CCD71793.1| Protein Y51H7C.7 [Caenorhabditis elegans]
Length = 133
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 81 KRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTK 131
KR+ MK+ +D PR++K A+ FVRNALW PE K K
Sbjct: 87 KRMTADMKEINLRQDA----PRINKQAAANFVRNALWEQPEQGESSKKAAK 133
>gi|154286698|ref|XP_001544144.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407785|gb|EDN03326.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 249
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
+++ L D + ++ Q + K+P K + +L+ YAI SL F LR++ V++ V
Sbjct: 16 NIDDLEDVLEPLLGQPLSATTQKMPVMDKAKLHVLITYAIESLIFSYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + +K T +DK+A+ RF+++ L
Sbjct: 76 FKELTRVKQYFEKIKTVETVPEKRTTA--VDKEAAGRFIKHGL 116
>gi|326485550|gb|EGE09560.1| exosome-associated family protein [Trichophyton equinum CBS 127.97]
Length = 278
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Query: 20 LESLVDEISEIIKQVQAVDFT----KLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDF 75
LE +D+I E+++ + T KLP K + +L+ Y+I SL F LR+ VD+
Sbjct: 15 LEDSIDDIEEVLEPLLERGLTATAQKLPLLDKAKLHVLLSYSIESLIFSYLRLNDVDAKE 74
Query: 76 VKV--ELKRIQ---ETMKKFKQTKDKLTIMPRLDKDASKRFVRNAL 116
V EL R++ E +K + +K T+ LD A+ RF+++ L
Sbjct: 75 HPVFRELNRVRQYHEKIKTLEAPPEKRTMT--LDTQAAGRFIKHGL 118
>gi|443896470|dbj|GAC73814.1| DNA-binding protein C1D [Pseudozyma antarctica T-34]
Length = 231
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 54 VLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKD------KLTIMPRLDK 105
V Y + L +I L+ K VD + V EL+R++ K K+ +D + R+DK
Sbjct: 76 VAYVLMDLVWILLKTKGVDPTNHPVMQELERVKSYFGKIKRVQDDEKEPKEEQKGSRVDK 135
Query: 106 DASKRFVRNALWTPPESDTPCDKKTK---DIPPVSKKTK 141
A+ RF+R+AL P S TP K TK D P ++TK
Sbjct: 136 SAAGRFIRSALAGEPGS-TPG-KHTKFDDDASPAKQETK 172
>gi|261193653|ref|XP_002623232.1| exosome-associated family protein [Ajellomyces dermatitidis
SLH14081]
gi|239588837|gb|EEQ71480.1| exosome-associated family protein [Ajellomyces dermatitidis
SLH14081]
Length = 297
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
+++ L D + ++ Q + K+P K + +L+ YAI S+ F LR++ V++ V
Sbjct: 71 NIDDLEDVLEPLLGQPLSATTQKMPVLDKAKLHVLITYAIESMIFSYLRLQGVNAKEHPV 130
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + ++ T+ +DK+A+ RF+++ L
Sbjct: 131 FKELTRVKQYFEKIKAVETVPEQRTMA--VDKEAAGRFIKHGL 171
>gi|452836995|gb|EME38938.1| hypothetical protein DOTSEDRAFT_97097, partial [Dothistroma
septosporum NZE10]
Length = 134
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 19 DLESLVDEISE----IIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSD 74
DL S +D++ + +++Q + ++LP K + +L YA+ S+ F ++R+ V +
Sbjct: 3 DLVSNIDDLEQALQPLLQQALSASTSRLPLLDKAKLYILTTYALESILFSSVRLHGVSAT 62
Query: 75 F--VKVELKRIQETMKKFKQTKD-KLTIMPR---LDKDASKRFVRNALWTPPESD 123
V EL R++E K K ++ R LDK A+ RF+++ L + D
Sbjct: 63 THPVYQELNRVKEYFSKIKNAEEIGAGGSARNVGLDKGAAGRFIKHGLAGNEKYD 117
>gi|196006816|ref|XP_002113274.1| hypothetical protein TRIADDRAFT_57253 [Trichoplax adhaerens]
gi|190583678|gb|EDV23748.1| hypothetical protein TRIADDRAFT_57253 [Trichoplax adhaerens]
Length = 130
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 35/136 (25%)
Query: 1 MTLNLIDELLS-KFINSQHDLESLVDEISEIIKQVQAVDFT----KLPNDKKIEADLLVL 55
M +NL E+L + INS +L S +D++ +I+ Q+ F KL + +A L+V
Sbjct: 1 MAINLNHEVLPPELINSVQELNSSIDKVDKILDQIITNQFADNIDKLELLDQAKAYLVVT 60
Query: 56 YAINSLYFINLRIKHVDSDFVKVELKRIQETMKKFKQTKDKLTIMP-RLDKDASKRFVRN 114
YA+NSLY+ TK++ ++ ++DK A+ R +++
Sbjct: 61 YAMNSLYW-----------------------------TKNRYALLAMKVDKKAAGRIIKS 91
Query: 115 ALWTPPESDTPCDKKT 130
AL P + D + K+
Sbjct: 92 ALKQPIKKDEADNTKS 107
>gi|195457066|ref|XP_002075410.1| GK15287 [Drosophila willistoni]
gi|194171495|gb|EDW86396.1| GK15287 [Drosophila willistoni]
Length = 161
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 29 EIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV--ELKRIQET 86
+I + + A L D +I+ D + YA ++LY+++L+++ D + +L R +E
Sbjct: 43 DIKRALSARSSPTLSLDDQIKLDTFLTYANSTLYWMHLKLQGTDVSKHPIIHDLNRAKEM 102
Query: 87 MKKFKQTKDKLTIMPRLDKDASKRFVRNALWT 118
+ + K+ L PRLD A+KRF+ + T
Sbjct: 103 LARDKEINASLAA-PRLDMPATKRFIAAGMHT 133
>gi|315047170|ref|XP_003172960.1| exosome-associated family protein [Arthroderma gypseum CBS 118893]
gi|311343346|gb|EFR02549.1| exosome-associated family protein [Arthroderma gypseum CBS 118893]
Length = 286
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 41 KLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV--ELKRIQETMKKFKQTK---D 95
KLP K + +L+ Y+I SL F LR+ VD+ V ELKR+++ K K + +
Sbjct: 40 KLPLLDKAKLHILLTYSIESLIFSYLRLNDVDAKEHPVFRELKRVRQYHDKIKTLEAPPE 99
Query: 96 KLTIMPRLDKDASKRFVRNAL 116
K T+ LDK A+ RF+++ L
Sbjct: 100 KRTMT--LDKQAAGRFIKHGL 118
>gi|195479072|ref|XP_002100753.1| GE17240 [Drosophila yakuba]
gi|194188277|gb|EDX01861.1| GE17240 [Drosophila yakuba]
Length = 160
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 42 LPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTI 99
L +++I+ D ++Y ++L++I L+++ +D V +L R +E + + K+ D L
Sbjct: 58 LTTNEQIKLDSYLVYLKSTLFWIYLKLQGLDVSKHGVMHDLSRTKELLARDKEINDALAA 117
Query: 100 MPRLDKDASKRFVRNALWT 118
PRLD A+KRF+ T
Sbjct: 118 -PRLDMQAAKRFIAAGTHT 135
>gi|406862607|gb|EKD15657.1| hypothetical protein MBM_06285 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 234
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 20 LESLVDEISEI-------IKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD 72
LE+L DEI ++ IK + +KLP K + +LV YAI S+ F LR+ V
Sbjct: 10 LETLDDEIDDLEESLEPLIKVALSETASKLPLLDKAKLYILVTYAIESMLFSYLRLHGVK 69
Query: 73 SDFVKV--ELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNAL 116
+ V EL R+++ K K ++ L +D+ A+ RF++ L
Sbjct: 70 ARDHPVFKELTRVKQYFDKIKNIENPLERTMAVDRAAAARFIKAGL 115
>gi|239613840|gb|EEQ90827.1| exosome-associated family protein [Ajellomyces dermatitidis ER-3]
Length = 242
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
+++ L D + ++ Q + K+P K + +L+ YAI S+ F LR++ V++ V
Sbjct: 16 NIDDLEDVLEPLLGQPLSATTQKMPVLDKAKLHVLITYAIESMIFSYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + ++ T+ +DK+A+ RF+++ L
Sbjct: 76 FKELTRVKQYFEKIKAVETVPEQRTMA--VDKEAAGRFIKHGL 116
>gi|449302029|gb|EMC98038.1| hypothetical protein BAUCODRAFT_32044 [Baudoinia compniacensis UAMH
10762]
Length = 286
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 19 DLESLVDEISE----IIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSD 74
DL S +D++ E ++K + +KLP K + + YAI S+ F LR+ VD+
Sbjct: 12 DLSSNIDDLEEALAPLLKTALSTSASKLPLLDKAKLYVHATYAIESILFSALRLNGVDAK 71
Query: 75 FVKV--ELKRIQETMKKFKQTKDKLTIMP-RLDKDASKRFVRNAL 116
+ EL R++E K K + T +DK A+ RF++ L
Sbjct: 72 SHPIFQELNRVKEYFAKIKTAETAGTKRSTTVDKVAAGRFIKQGL 116
>gi|198477485|ref|XP_002136591.1| GA25611 [Drosophila pseudoobscura pseudoobscura]
gi|198142880|gb|EDY71593.1| GA25611 [Drosophila pseudoobscura pseudoobscura]
Length = 164
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 45 DKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV--ELKRIQETMKKFKQTKDKLTIMPR 102
D++IE D ++Y +LY++ L+++ D + +L R +E + + K+ L PR
Sbjct: 61 DEQIELDSYLVYLTTTLYWMYLKLQGSDVSKHGIIHDLGRAKEILARSKELNTSLEA-PR 119
Query: 103 LDKDASKRFVRNALWT 118
LD A+KRF+ + T
Sbjct: 120 LDMPATKRFIAAGMHT 135
>gi|24642361|ref|NP_573092.1| Rrp47 [Drosophila melanogaster]
gi|7293161|gb|AAF48545.1| Rrp47 [Drosophila melanogaster]
gi|254939765|gb|ACT88145.1| LD38104p [Drosophila melanogaster]
Length = 159
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 42 LPNDKKIEADLLVLYAINSLYFINLRIKHVDSD--FVKVELKRIQETMKKFKQTKDKLTI 99
L +++I+ D ++Y ++L+FI L+++ D+ V +L+R ++ + + K+ D L
Sbjct: 58 LNTNEQIKLDSYLVYLNSTLFFIYLKLQGEDASNHAVMHDLRRTRDLLARDKKINDALAA 117
Query: 100 MPRLDKDASKRFVRNALWT 118
PRLD A+KRF+ T
Sbjct: 118 -PRLDMPAAKRFIAAGTHT 135
>gi|346320399|gb|EGX89999.1| exosome-associated family protein [Cordyceps militaris CM01]
Length = 181
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 15/116 (12%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
+D+L S+ + + L L +I E+ Q+ +D KL + L+ Y+I SL F
Sbjct: 11 LDKLDSQLDSLEEALAPLFGDIDEVASQLPLLDKAKLFS--------LITYSIESLIFSA 62
Query: 66 LRIKHVDSDF--VKVELKRIQETMKKFKQTKD---KLTIMPRLDKDASKRFVRNAL 116
L+++ D+ V ELKR+Q+ K K ++ + T P +++A+ R ++ AL
Sbjct: 63 LKVQGADTQNHPVLAELKRVQQYFAKIKAAEEPAGERTTTP--NQEATARILKAAL 116
>gi|145503085|ref|XP_001437520.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404670|emb|CAK70123.1| unnamed protein product [Paramecium tetraurelia]
Length = 195
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 14/106 (13%)
Query: 20 LESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN--------LRIKHV 71
L+SL+ E+SE + + + + +IE +L + Y ++SLY+ L++ V
Sbjct: 17 LQSLIQELSEKGNLDEITE--GMSHKDQIELNLNLAYTLSSLYYCKMYYNYLAYLKLNSV 74
Query: 72 DSDFVKV--ELKRIQETMKKF--KQTKDKLTIMPRLDKDASKRFVR 113
++ + EL RIQE +K+ Q K LD+DA+KRF++
Sbjct: 75 ETSAHPIMNELSRIQEAFQKYLPSQVKQPDQKQMSLDRDAAKRFIQ 120
>gi|242217545|ref|XP_002474571.1| predicted protein [Postia placenta Mad-698-R]
gi|220726258|gb|EED80213.1| predicted protein [Postia placenta Mad-698-R]
Length = 292
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 56 YAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVR 113
Y + L FI L+ + +D + V EL RI++ K K +D +DKDA+ RF++
Sbjct: 55 YLVYDLIFIYLKTRGIDPKTHPVVAELDRIRQYFDKIKNAEDPAKRTATVDKDAANRFIK 114
Query: 114 NAL 116
+A+
Sbjct: 115 HAI 117
>gi|194760432|ref|XP_001962445.1| GF19713 [Drosophila ananassae]
gi|190616142|gb|EDV31666.1| GF19713 [Drosophila ananassae]
Length = 154
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 19 DLESLVDEI-SEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKH--VDSDF 75
DL + ++ + ++I K + A L + KI+ D + Y ++L++I L+++ V
Sbjct: 23 DLHTCIETLEADIKKALVAQKSRHLTTNDKIKLDSYLAYLCSTLFWIQLKLQGEDVSKHG 82
Query: 76 VKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWT 118
V +L R +E M + K+ L PRL+ A+KRF+ + T
Sbjct: 83 VLHDLSRAREIMARDKEIDASLAA-PRLNMPATKRFIAAGMHT 124
>gi|171684867|ref|XP_001907375.1| hypothetical protein [Podospora anserina S mat+]
gi|170942394|emb|CAP68046.1| unnamed protein product [Podospora anserina S mat+]
Length = 315
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 12/105 (11%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFV 76
DL +L + + ++ V + +K+P K + +LV YAI SL F +LR+ D S V
Sbjct: 151 DLNTLQEVLQPLLSDVGDIS-SKMPLLDKAKLYVLVCYAIESLIFSSLRLNGTDAKSHPV 209
Query: 77 KVELKRIQETMKKFKQTKDKLTIMPR-----LDKDASKRFVRNAL 116
EL R+++ +K + KL P ++ +A RFVRN L
Sbjct: 210 FTELTRVRQYFEKIQ----KLESPPEERENTVNTEAVARFVRNDL 250
>gi|428180536|gb|EKX49403.1| hypothetical protein GUITHDRAFT_67864 [Guillardia theta CCMP2712]
Length = 124
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 51 DLLVLYAINSLYFINLRIKH---VDSDFVKVELKRIQETMKKFKQT-------KDKLTIM 100
+L++ Y I+SL+F+ L+ + + V EL R++ M K K K KL
Sbjct: 52 NLMIAYTIDSLFFLYLKTQQGIATEEHQVNEELARVKSYMSKLKDATAAQENEKSKL--- 108
Query: 101 PRLDKDASKRFVRNAL 116
+L+KDA+ RF++ L
Sbjct: 109 -KLNKDAAARFIKAGL 123
>gi|242223414|ref|XP_002477335.1| predicted protein [Postia placenta Mad-698-R]
gi|220723166|gb|EED77462.1| predicted protein [Postia placenta Mad-698-R]
Length = 292
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 56 YAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVR 113
Y + L FI L+ + +D + V EL RI++ K K +D +DKDA+ RF++
Sbjct: 55 YLVYDLIFIYLKTRGIDPKTHPVVAELDRIRQYFDKIKNAEDPAKRTATVDKDAANRFIK 114
Query: 114 NAL 116
+A+
Sbjct: 115 HAI 117
>gi|400594430|gb|EJP62274.1| Sas10/Utp3/C1D family protein [Beauveria bassiana ARSEF 2860]
Length = 176
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
+D+L S+ N + L L+ + EI Q+ +D KL + L Y+I SL F
Sbjct: 11 LDKLDSQLDNLEEALAPLLGNMDEISSQLPLLDKAKLFS--------LAAYSIESLLFSA 62
Query: 66 LRIKHVDSD--FVKVELKRIQETMKKFKQTKDKLTI-MPRLDKDASKRFVR 113
L+++ D+ V ELKR+Q+ K K ++ + ++++A+ RF++
Sbjct: 63 LKLQGADAQEHAVYAELKRVQQYFGKIKAIEEPVGQRTTTVNQEAAARFLK 113
>gi|429851278|gb|ELA26480.1| exosome-associated family protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 179
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 53 LVLYAINSLYFINLRIKHVDS--DFVKVELKRIQETMKKFKQTKD 95
L YAI SL F +LR++ VD+ V ELKR+Q+ K KQ ++
Sbjct: 49 LTAYAIESLLFSSLRLQGVDAKDHNVMTELKRVQQYFGKIKQVEE 93
>gi|195566910|ref|XP_002107018.1| GD17220 [Drosophila simulans]
gi|194204415|gb|EDX17991.1| GD17220 [Drosophila simulans]
Length = 169
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 41 KLPNDKKIEADLLVLYAINSLYFINLRI--KHVDSDFVKVELKRIQETMKKFKQTKDKLT 98
+L +++I+ D ++Y ++L+FI L++ + V + V +L+R ++ + + K+ + L
Sbjct: 57 RLNTNEQIKLDTYLVYLNSTLFFIYLKLLGEDVSNHVVMHDLRRTRDLLARDKEINEALA 116
Query: 99 IMPRLDKDASKRFVRNALWT 118
PRLD A+KRF+ T
Sbjct: 117 A-PRLDMPAAKRFIAAGTHT 135
>gi|402072838|gb|EJT68524.1| hypothetical protein GGTG_13905 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 181
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 5 LIDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFI 64
+++ L + DL+ L++ +EI ++ +D KL ++L+ Y+I SL F
Sbjct: 11 MVEGLADSVTTLEGDLKPLLENFAEISSKLPVLDQAKL--------NVLLAYSIESLLFS 62
Query: 65 NLRIKHVDSDFVKV--ELKRIQETMKKFKQTKDKLTIMPR-----LDKDASKRFVR 113
LR++ VD+ V EL R ++ +K TK + PR ++K A+ RF+R
Sbjct: 63 ALRLEGVDAKNHDVFKELTRTRQYFEKI--TKAETPPEPRPENATINKQAAIRFIR 116
>gi|350297444|gb|EGZ78421.1| hypothetical protein NEUTE2DRAFT_154832 [Neurospora tetrasperma
FGSC 2509]
Length = 404
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDS--DFV 76
DL+ L + ++ V V +KLP K + ++V YAI S+ F +LR+ VD+ +
Sbjct: 16 DLDQLEAALKPVLGDVGDVS-SKLPLLDKAKLYVMVTYAIESILFSSLRLNGVDAKEHAI 74
Query: 77 KVELKRIQETMKKFKQTKDKLTIMPR-LDKDASKRFVRNAL 116
EL R+++ +K + ++ + ++K+A+ RF+R+ L
Sbjct: 75 FTELTRVRQYFEKIQNIENPPQEREQTVNKEAAARFIRSDL 115
>gi|85113388|ref|XP_964513.1| hypothetical protein NCU02154 [Neurospora crassa OR74A]
gi|28926298|gb|EAA35277.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 450
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDS--DFV 76
DL+ L + ++ V V +KLP K + ++V YAI S+ F +LR+ VD+ +
Sbjct: 16 DLDQLEAALKPVLGDVGDVS-SKLPLLDKAKLYVMVTYAIESILFSSLRLNGVDAKEHAI 74
Query: 77 KVELKRIQETMKKFKQTKDKLTIMPR-LDKDASKRFVRNAL 116
EL R+++ +K + ++ + ++K+A+ RF+R+ L
Sbjct: 75 FTELTRVRQYFEKIQNIENPPQEREQTVNKEAAARFIRSDL 115
>gi|336463345|gb|EGO51585.1| hypothetical protein NEUTE1DRAFT_125262 [Neurospora tetrasperma
FGSC 2508]
Length = 379
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDS--DFV 76
DL+ L + ++ V V +KLP K + ++V YAI S+ F +LR+ VD+ +
Sbjct: 16 DLDQLEAALKPVLGDVGDVS-SKLPLLDKAKLYVMVTYAIESILFSSLRLNGVDAKEHAI 74
Query: 77 KVELKRIQETMKKFKQTKDKLTIMPR-LDKDASKRFVRNAL 116
EL R+++ +K + ++ + ++K+A+ RF+R+ L
Sbjct: 75 FTELTRVRQYFEKIQNIENPPQEREQTVNKEAAARFIRSDL 115
>gi|328767407|gb|EGF77457.1| hypothetical protein BATDEDRAFT_27661 [Batrachochytrium
dendrobatidis JAM81]
Length = 176
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 24/130 (18%)
Query: 7 DELLSKFINSQHDLESLVD-EISEIIKQVQAVDFTKLPNDKKIEADLLVL-YAINSLYFI 64
++LL + + +Q L +++D + + ++AV+ +L L L Y IN+L F+
Sbjct: 7 EQLLDQMVATQKALSAILDTSLESTLGNLEAVEKARL---------LTTLSYTINTLSFV 57
Query: 65 NLRIKHVDSDF--VKVELKRIQETMKKF-KQTK------DKLTIMPR----LDKDASKRF 111
L+++ V++ VK EL I F +T+ +K+ R +D+DA+KRF
Sbjct: 58 YLKLQGVNAKTHPVKKELASILNAFALFFDRTRIYFEKIEKMAGATRNPASIDRDAAKRF 117
Query: 112 VRNALWTPPE 121
++++L PE
Sbjct: 118 LQHSLAQNPE 127
>gi|396469461|ref|XP_003838411.1| hypothetical protein LEMA_P113470.1 [Leptosphaeria maculans JN3]
gi|312214979|emb|CBX94932.1| hypothetical protein LEMA_P113470.1 [Leptosphaeria maculans JN3]
Length = 367
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 19 DLESLVDEISEIIKQVQAVDFTK----LPNDKKIEADLLVLYAINSLYFINLRIKHVDSD 74
DLE +DE++ + + A F+K LP K + +L Y+I SL F L+ +++
Sbjct: 13 DLEVNIDELTTTLAPLLASPFSKTASSLPLLDKSKLYVLAAYSIESLLFSTLQASGINAK 72
Query: 75 FVKV--ELKRIQETMKKFKQTKDK-----LTIMPRLDKDASKRFVRNAL 116
+ EL R++ K K+ +D+ RLD A++RF+++ L
Sbjct: 73 EHAIFPELARLKGYFGKIKEIEDRGVKGSAEGRARLDVGAAQRFIKHGL 121
>gi|154290546|ref|XP_001545866.1| hypothetical protein BC1G_15617 [Botryotinia fuckeliana B05.10]
gi|347841956|emb|CCD56528.1| hypothetical protein [Botryotinia fuckeliana]
Length = 243
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 40 TKLPNDKKIEADLLVLYAINSLYFINLRIKHVDS--DFVKVELKRIQETMKKFKQTKDKL 97
+KLP K + LV YAI S+ F LR+ V++ V EL R+++ +K K T++
Sbjct: 37 SKLPLLDKAKLYTLVTYAIESILFSYLRLNGVNAREHPVFTELTRMKQYFEKIKVTENPP 96
Query: 98 TIMP----RLDKDASKRFVRNAL 116
+LDK A+ RF++ L
Sbjct: 97 ATAAERNLKLDKGAAGRFIKAGL 119
>gi|444723437|gb|ELW64094.1| Nuclear nucleic acid-binding protein C1D [Tupaia chinensis]
Length = 100
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 82 RIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP-PESDTPCDKKTK 131
RI+ M + K+ DK +LD+ A+ RFV+NALW P P++ + K K
Sbjct: 48 RIRVYMNRVKEITDKKKA-GKLDRGAASRFVKNALWEPKPKNASKVGSKEK 97
>gi|340517754|gb|EGR47997.1| predicted protein [Trichoderma reesei QM6a]
Length = 1250
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 20/72 (27%)
Query: 88 KKFKQTKDKLTIMPRLDKDASKRFVRNALWTPPESDTPCDKKTKD--------IPPVSKK 139
KKF Q +K+ ++P N LW PP S+ +TKD P KK
Sbjct: 55 KKFLQKHEKIPMVP------------NQLWGPPFSNARVHSRTKDKARLEILKTPIYVKK 102
Query: 140 TKFDADGNVIEE 151
+K DADG++I
Sbjct: 103 SKNDADGSIISH 114
>gi|336258538|ref|XP_003344081.1| hypothetical protein SMAC_09064 [Sordaria macrospora k-hell]
gi|380093055|emb|CCC09292.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 165
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDS--DFV 76
DL+ L + ++ V V +KLP K + ++V YAI S+ F +LR+ VD+ +
Sbjct: 16 DLDQLEAALKPVLGDVGDVS-SKLPLLDKAKLYVMVTYAIESMLFSSLRLNSVDAKEHAI 74
Query: 77 KVELKRIQETMKKFKQTKDKLTIMPR-LDKDASKRFVRNAL 116
EL R+++ +K ++ ++ + ++K+A+ RF+R+ L
Sbjct: 75 FTELTRVRQYFEKIQKIENPPQEREQTVNKEAAARFIRSDL 115
>gi|67537172|ref|XP_662360.1| hypothetical protein AN4756.2 [Aspergillus nidulans FGSC A4]
gi|40741608|gb|EAA60798.1| hypothetical protein AN4756.2 [Aspergillus nidulans FGSC A4]
Length = 718
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 27 ISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV--ELKRIQ 84
I+ I++ KLP K + ++ YA+ SL F LR+ V + V ELKR++
Sbjct: 499 IAPILQSTVVETSKKLPVLDKAKFHVMTAYALESLVFSYLRLHGVKATEHPVYRELKRVK 558
Query: 85 ETMKKFK--QTKDKLTIMPRLDKDASKRFVRNAL 116
+ K K +T+ + M LDK A+ RF+++ L
Sbjct: 559 QYFDKIKALETEPEQRTMV-LDKQAAGRFIKHGL 591
>gi|327349978|gb|EGE78835.1| exosome-associated family protein [Ajellomyces dermatitidis ATCC
18188]
Length = 200
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 19 DLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV 78
+++ L D + ++ Q + K+P K + +L+ YAI S+ F LR++ V++ V
Sbjct: 16 NIDDLEDVLEPLLGQPLSATTQKMPVLDKAKLHVLITYAIESMIFSYLRLQGVNAKEHPV 75
Query: 79 --ELKRIQETMKKFKQTK---DKLTIMPRLDKDASKRFVRNAL 116
EL R+++ +K K + ++ T+ +D +A+ RF+++ L
Sbjct: 76 FKELTRVKQYFEKIKAVETVPEQRTMA--VDTEAAGRFIKHGL 116
>gi|350631666|gb|EHA20037.1| hypothetical protein ASPNIDRAFT_178591 [Aspergillus niger ATCC
1015]
Length = 223
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 41 KLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV--ELKRIQETMKK---FKQTKD 95
KLP K + +LV YA+ SL F LR+ V++ V EL R+++ K + +
Sbjct: 38 KLPVMDKAKFHVLVTYALESLIFSYLRLHGVNAKEHSVFRELTRVKQYFAKITALEAEPE 97
Query: 96 KLTIMPRLDKDASKRFVRNAL 116
K T+ LDK A+ RF+++ L
Sbjct: 98 KRTLT--LDKQAASRFIKHGL 116
>gi|116193443|ref|XP_001222534.1| hypothetical protein CHGG_06439 [Chaetomium globosum CBS 148.51]
gi|88182352|gb|EAQ89820.1| hypothetical protein CHGG_06439 [Chaetomium globosum CBS 148.51]
Length = 175
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 19/119 (15%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
+D+L + +Q L LV +I +I ++ +D KL +LV Y I +L F
Sbjct: 10 LDKLEEELNKAQETLGPLVGDIGDISSKLPLLDKAKL--------YVLVSYTIEALLFSA 61
Query: 66 LRIKHVDSDFVKV--ELKRIQETMKKFKQTKDKLTIMP-----RLDKDASKRFVRNALW 117
LR+ VD+ V EL R+++ ++K +KL P ++ +A+ RF+R+ L
Sbjct: 62 LRLNGVDTKAHPVFTELARVRQYVEKI----EKLENPPAERENAVNTEAAARFLRSDLG 116
>gi|296125325|ref|YP_003632577.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296017141|gb|ADG70378.1| SCP-like extracellular [Brachyspira murdochii DSM 12563]
Length = 257
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 9 LLSKFINSQHDLESLVDEISEIIK-QVQAVDFTKLPNDKKIEADLLVLYAINSL----YF 63
+S I S + +E DE+ +I + V LPN++++ + L LY +++ +F
Sbjct: 12 FISTLILSANTIE---DEVFRLINLERSKVSLPPLPNNQRLHS--LALYHADNMAKNKFF 66
Query: 64 INLRIKHVDSDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALWTP 119
N+ + +DS +V+L E + ++ KL ++P DK A++ V+N + TP
Sbjct: 67 SNIDLDGLDSKARQVKL--YPEMVGNISESLGKLDVIPFTDKKAAESIVKNLMATP 120
>gi|134079654|emb|CAK97080.1| unnamed protein product [Aspergillus niger]
Length = 224
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 41 KLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV--ELKRIQETMKK---FKQTKD 95
KLP K + +LV YA+ SL F LR+ V++ V EL R+++ K + +
Sbjct: 38 KLPVMDKAKFHVLVTYALESLIFSYLRLHGVNAKEHSVFRELTRVKQYFAKITALEAEPE 97
Query: 96 KLTIMPRLDKDASKRFVRNAL 116
K T+ LDK A+ RF+++ L
Sbjct: 98 KRTLT--LDKQAASRFIKHGL 116
>gi|195355493|ref|XP_002044226.1| GM22601 [Drosophila sechellia]
gi|194129515|gb|EDW51558.1| GM22601 [Drosophila sechellia]
Length = 159
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 42 LPNDKKIEADLLVLYAINSLYFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDKLTI 99
L +++I+ D ++Y ++L+FI +++ VD + V +L+R ++ + + K+ + L
Sbjct: 58 LNTNEQIKLDSYLVYLNSTLFFIYQKLQGVDVSNHAVMHDLRRTRDLLARDKEINEALAA 117
Query: 100 MPRLDKDASKRFVRNALWT 118
PRLD A+KRF+ T
Sbjct: 118 -PRLDMPAAKRFIAAGTHT 135
>gi|317033160|ref|XP_001394954.2| exosome-associated protein [Aspergillus niger CBS 513.88]
Length = 235
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 41 KLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV--ELKRIQETMKK---FKQTKD 95
KLP K + +LV YA+ SL F LR+ V++ V EL R+++ K + +
Sbjct: 49 KLPVMDKAKFHVLVTYALESLIFSYLRLHGVNAKEHSVFRELTRVKQYFAKITALEAEPE 108
Query: 96 KLTIMPRLDKDASKRFVRNAL 116
K T+ LDK A+ RF+++ L
Sbjct: 109 KRTLT--LDKQAASRFIKHGL 127
>gi|358369127|dbj|GAA85742.1| exosome-associated protein [Aspergillus kawachii IFO 4308]
Length = 224
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 41 KLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV--ELKRIQETMKK---FKQTKD 95
KLP K + +LV YA+ SL F LR+ V++ V EL R+++ K + +
Sbjct: 38 KLPVMDKAKFHVLVTYALESLIFSYLRLHGVNAKEHSVFRELTRVKQYFAKITALEAEPE 97
Query: 96 KLTIMPRLDKDASKRFVRNAL 116
K T+ LDK A+ RF+++ L
Sbjct: 98 KRTLT--LDKQAASRFIKHGL 116
>gi|90076024|dbj|BAE87692.1| unnamed protein product [Macaca fascicularis]
Length = 112
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 13/97 (13%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVD----FTKLPNDKKIEADLLVLYAINSL 61
I E LS F NS + + E++K + +V KL ++ + DL+ Y +NS+
Sbjct: 14 IHEYLSAFENS-------IGAVDEMLKTMMSVSRNELLQKLDPLEQAKVDLVSAYTLNSM 66
Query: 62 YFINLRIKHVD--SDFVKVELKRIQETMKKFKQTKDK 96
+++ L + V+ VK EL+RI+ M + K+ DK
Sbjct: 67 FWVYLATQGVNPKEHPVKQELERIRVYMNRVKEITDK 103
>gi|367042224|ref|XP_003651492.1| hypothetical protein THITE_2064729 [Thielavia terrestris NRRL 8126]
gi|346998754|gb|AEO65156.1| hypothetical protein THITE_2064729 [Thielavia terrestris NRRL 8126]
Length = 176
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 19/119 (15%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
+D L +Q L+ L+ +I +I ++ +D KL +L+ Y I SL F
Sbjct: 10 LDRLEEGLNKAQETLQPLLGDIGDISSKLPLLDKAKL--------YVLLSYTIESLLFSA 61
Query: 66 LRIKHVDS--DFVKVELKRIQETMKKFKQTKDKLTIMP-----RLDKDASKRFVRNALW 117
LR+ VD+ + EL R+++ M+K + KL P +++ +A+ RF+++ L
Sbjct: 62 LRLNGVDTKNHAIFTELTRVKQYMEKIQ----KLETPPAERENKVNAEAAARFLKSDLG 116
>gi|119493217|ref|XP_001263815.1| exosome-associated protein, putative [Neosartorya fischeri NRRL
181]
gi|119411975|gb|EAW21918.1| exosome-associated protein, putative [Neosartorya fischeri NRRL
181]
Length = 248
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 16/101 (15%)
Query: 20 LESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFINLRIKHVDSDFVKV- 78
LES V E S KLP K + +LV YA+ SL F LR+ V++ V
Sbjct: 28 LESPVSETS-----------NKLPVLDKAKFHVLVTYALESLIFSYLRLHGVNAKEHPVF 76
Query: 79 -ELKRIQETMKKFK--QTKDKLTIMPRLDKDASKRFVRNAL 116
EL R+++ K + +T+ + M LDK+A+ RF+++ L
Sbjct: 77 RELTRVKQYYGKIQALETEPEQRTMT-LDKEAAGRFIKHGL 116
>gi|302664404|ref|XP_003023832.1| exosome-associated family protein [Trichophyton verrucosum HKI
0517]
gi|291187850|gb|EFE43214.1| exosome-associated family protein [Trichophyton verrucosum HKI
0517]
Length = 292
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 20 LESLVDEISEIIKQVQAVDFT----KLPNDKKIEADLLVLYAINSLYFIN------LRIK 69
LE +D+I E+++ + T KLP K + +L+ Y+I SL F N LR+
Sbjct: 15 LEDSIDDIEEVLEPLLERGLTATAQKLPLLDKAKLHVLLSYSIESLIFSNFLLPAYLRLN 74
Query: 70 HVDSDFVKV--ELKRIQ---ETMKKFKQTKDKLTIMPRLDKDASKRFVRNAL 116
VD+ V EL R++ E +K + +K T+ LD A+ RF+++ L
Sbjct: 75 DVDAKEHPVFRELNRVRQYHEKIKTLEAPPEKRTMT--LDTQAAGRFIKHGL 124
>gi|390367519|ref|XP_781000.2| PREDICTED: nuclear nucleic acid-binding protein C1D-like
[Strongylocentrotus purpuratus]
Length = 144
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 7/106 (6%)
Query: 18 HDLESLVDEISEIIKQVQAVDFT----KLPNDKKIEADLLVLYAINSLYFINLRIKHVD- 72
D ++ + E+ + + + +V KL + K + L Y+INS +++ L + VD
Sbjct: 12 EDFKAALCEVENVFEPMNSVSLADINGKLDSLDKAKLQLTFAYSINSFFWMYLCTQGVDP 71
Query: 73 -SDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVRNALW 117
+ +K EL RIQ+ M + K DK +LDK A+KRF++NALW
Sbjct: 72 RNHPIKQELGRIQKYMSRVKDIADKKKAA-KLDKGAAKRFIKNALW 116
>gi|302505028|ref|XP_003014735.1| exosome-associated family protein [Arthroderma benhamiae CBS
112371]
gi|291178041|gb|EFE33832.1| exosome-associated family protein [Arthroderma benhamiae CBS
112371]
Length = 291
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 17/112 (15%)
Query: 20 LESLVDEISEIIKQVQAVDFT----KLPNDKKIEADLLVLYAINSLYFIN------LRIK 69
LE +D+I E+++ + T KLP K + +L+ Y+I SL F N LR+
Sbjct: 15 LEDSIDDIEEVLEPLLERGLTATAQKLPLLDKAKLHVLLSYSIESLIFSNFLLPAYLRLN 74
Query: 70 HVDSDFVKV--ELKRIQ---ETMKKFKQTKDKLTIMPRLDKDASKRFVRNAL 116
VD+ V EL R++ E +K + +K T+ LD A+ RF+++ L
Sbjct: 75 DVDAKEHPVFRELNRVRQYHEKIKTLEAPPEKRTMT--LDTQAAGRFIKHGL 124
>gi|320163434|gb|EFW40333.1| hypothetical protein CAOG_00858 [Capsaspora owczarzaki ATCC 30864]
Length = 171
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 56 YAINSLY--FINLRIKHVDSDFVKVELKRIQETMKKFKQTKDKLTIMPRLDKDASKRFVR 113
+ NS++ ++N + + VK EL RI+ M K K +K PRLDK + R +
Sbjct: 93 FTANSMFWMYLNAQGTAPEDHPVKNELARIKHYMTKVKTATEKTIAHPRLDKAVTDRIIA 152
Query: 114 NALWTPPESD 123
+ + +P S+
Sbjct: 153 HNISSPALSE 162
>gi|322694540|gb|EFY86367.1| exosome-associated family protein [Metarhizium acridum CQMa 102]
Length = 179
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 6 IDELLSKFINSQHDLESLVDEISEIIKQVQAVDFTKLPNDKKIEADLLVLYAINSLYFIN 65
+D L S+ N + L L++ ++E Q+ +D KL + L Y+I SL F
Sbjct: 11 LDRLDSQLDNLEDALAPLLNNLNEKASQLPLLDKAKLFS--------LTAYSIESLLFSY 62
Query: 66 LRIKHVDSD--FVKVELKRIQETMKKFKQTKD 95
LR++ D+ V ELKR+Q K K ++
Sbjct: 63 LRLQGADAQNHAVYAELKRVQHYFGKIKAAEE 94
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,209,125,990
Number of Sequences: 23463169
Number of extensions: 82151309
Number of successful extensions: 306850
Number of sequences better than 100.0: 292
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 306690
Number of HSP's gapped (non-prelim): 314
length of query: 156
length of database: 8,064,228,071
effective HSP length: 118
effective length of query: 38
effective length of database: 9,590,541,425
effective search space: 364440574150
effective search space used: 364440574150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)