BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2800
(184 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91092850|ref|XP_968855.1| PREDICTED: similar to proteasome beta subunit [Tribolium castaneum]
gi|270003046|gb|EEZ99493.1| hypothetical protein TcasGA2_TC000069 [Tribolium castaneum]
Length = 235
Score = 138 bits (348), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 93/148 (62%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
T+ Y +GG+V+AIAG DF +I +DTR S+ +I + +Q K+FRL + T +G SG
Sbjct: 20 TQHHFSPYADNGGSVVAIAGDDFVVIGADTRLSAGFSIYTRDQNKLFRLSDTTVLGCSGC 79
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
D+L + L A + + + ++ P A+MLS +LY +R FPYY+ +LVG+D G
Sbjct: 80 WCDTLTLTRILSARMQMYQQEHNKTMATPACAQMLSTMLYYKRFFPYYISNILVGLDNEG 139
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
KG +YSYDP+GHCEK YR G++ +
Sbjct: 140 KGCIYSYDPIGHCEKTTYRAGGSAGALL 167
>gi|242023933|ref|XP_002432385.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212517808|gb|EEB19647.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 219
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 9/177 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E E Y +GG+++AIAG DFA+I SDTR SSN +I + NQ K+F+L + T +G SG
Sbjct: 5 ETPFEFYTDNGGSIVAIAGEDFAVIGSDTRLSSNYSIFTRNQSKLFKLSDTTVLGCSGCW 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D+L++ ++A++ + + P ++MLS LLY +R PY V +L G+D GK
Sbjct: 65 CDTLQLTKVVRAQMQMYFHDNNKVMVTPAVSQMLSTLLYYKRFMPYLVYNVLAGLDDQGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSP-YESEFDYTDVITMALEELT 178
G VYSYDP+GHCE+ +R G+S LL P +++ Y ++ + E+LT
Sbjct: 125 GCVYSYDPIGHCERSTFRAGGSSGA--------LLQPLLDNQLGYHNMENVKKEQLT 173
>gi|321473024|gb|EFX83992.1| hypothetical protein DAPPUDRAFT_230628 [Daphnia pulex]
Length = 230
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++A+AG DFA+IASDTR +I+S Q K+F+L QT +G+SG D L
Sbjct: 22 YTDNGGTIVAVAGEDFAIIASDTRLIQGYSILSREQTKLFKLSEQTVLGVSGCWCDVLTF 81
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+A + +P+S P A+++S +LY +R FPYYV ++ G+D GKG +YSY
Sbjct: 82 TRTLEARMKMYLHEHLKPMSTPAVAQLVSTMLYHKRFFPYYVSNIVAGLDQDGKGTLYSY 141
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVGHCEK YR G + +
Sbjct: 142 DPVGHCEKNRYRAGGAAGAML 162
>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
Length = 237
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 90/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG DF +IA+DTR S+ TI + NQ K+F L + T +G SG D+ +
Sbjct: 29 YSDNGGSVVALAGDDFCVIAADTRLSTGFTIHTRNQDKLFPLSDTTILGCSGCWCDTTTL 88
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + +S P TA+MLS++LY +R FPYYV +L G+D GKG +YSY
Sbjct: 89 TRLLSARMQMYKHEHQKEMSTPATAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSY 148
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR G++ +
Sbjct: 149 DPIGHCEKTTYRAGGSAGALL 169
>gi|322796740|gb|EFZ19173.1| hypothetical protein SINV_12036 [Solenopsis invicta]
Length = 237
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG DF +IA+DTR S+ +I + Q K+F L N T +G SG D+L +
Sbjct: 29 YSDNGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFSLSNTTILGCSGCWCDTLTL 88
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + +S P A+MLS++LY +R FPYYV +L G+D GKG +YSY
Sbjct: 89 TRLLSARMQMYKHEHQKEMSTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSY 148
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR G++ +
Sbjct: 149 DPIGHCEKTTYRAGGSAGALL 169
>gi|195495065|ref|XP_002095108.1| GE22205 [Drosophila yakuba]
gi|194181209|gb|EDW94820.1| GE22205 [Drosophila yakuba]
Length = 235
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 91/149 (61%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISG 60
M A Y +GG+++AIAG DFA+IA+DTR SS I S Q K+F+L QT +G +G
Sbjct: 17 MKHADFSPYESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTG 76
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD+L + ++ + + ++ A+MLS+ +Y RR FPYYV +L GID
Sbjct: 77 CWADTLSLTGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNE 136
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
GKG VYSYDP+GHCEK YR GT+ +
Sbjct: 137 GKGVVYSYDPIGHCEKATYRAGGTAGTLL 165
>gi|194872539|ref|XP_001973034.1| GG15866 [Drosophila erecta]
gi|190654817|gb|EDV52060.1| GG15866 [Drosophila erecta]
Length = 235
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 90/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DFA+IA+DTR SS I S Q K+F+L +QT +G +G AD+L +
Sbjct: 25 YESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSHQTVLGSTGCWADTLSL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + ++ A+MLS+ +Y RR FPYYV +L GID GKG VYSY
Sbjct: 85 TGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR GT+ +
Sbjct: 145 DPIGHCEKATYRAGGTAGTLL 165
>gi|357605013|gb|EHJ64427.1| proteasome subunit beta 1 [Danaus plexippus]
Length = 232
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 92/143 (64%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+ E Y +GG+V+AIAG D+A+I +DTR S+ +I + Q K+F+L ++T +G +G
Sbjct: 18 QVRFEPYADNGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSDRTVLGATGCW 77
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D+L + LQA + + +S P A+MLS +LY +R FPYY+ +L G+D GK
Sbjct: 78 CDTLTLTRLLQARMQMYEHEHNKAMSTPAVAQMLSTMLYYKRFFPYYISNVLAGLDAEGK 137
Query: 123 GGVYSYDPVGHCEKVAYRLHGTS 145
G VYSYDP+GHCE+ YR G++
Sbjct: 138 GCVYSYDPIGHCERSNYRAGGSA 160
>gi|211939905|gb|ACJ13433.1| proteasome subunit beta 1 [Helicoverpa armigera]
Length = 232
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 91/143 (63%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+ E Y +GG+++AIAG DFA+I +DTR S+ +I + Q K+F+L ++T +G +G
Sbjct: 18 QVRFEPYADNGGSIVAIAGDDFAVIGADTRLSTGFSIYTREQKKLFKLSDKTVLGATGCW 77
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D+L + L A + + +S P A+MLS +LY +R FPYYV +L G+D GK
Sbjct: 78 CDTLTLTRLLSARMQMYEHEHNKSMSTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDADGK 137
Query: 123 GGVYSYDPVGHCEKVAYRLHGTS 145
G VYSYDP+GHCE+ YR G++
Sbjct: 138 GCVYSYDPIGHCERSNYRAGGSA 160
>gi|389609037|dbj|BAM18130.1| proteasome 26kD subunit [Papilio xuthus]
Length = 232
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 91/143 (63%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+ E Y +GG+V+AIAG D+A+I +DTR S+ +I + Q K+F+L +T +G +G
Sbjct: 18 QVRFEPYADNGGSVVAIAGEDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCW 77
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D+L + LQA + + ++ P A+MLS +LY +R FPYYV +L G+D GK
Sbjct: 78 CDTLTLTRLLQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGK 137
Query: 123 GGVYSYDPVGHCEKVAYRLHGTS 145
G +YSYDP+GHCE+ YR G++
Sbjct: 138 GCIYSYDPIGHCERSTYRAGGSA 160
>gi|389611001|dbj|BAM19111.1| proteasome 26kD subunit [Papilio polytes]
Length = 232
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 91/143 (63%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+ E Y +GG+V+AIAG D+A+I +DTR S+ +I + Q K+F+L +T +G +G
Sbjct: 18 QVRFEPYADNGGSVVAIAGDDYAVIGADTRLSTGFSIYTREQKKLFKLSERTVLGATGCW 77
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D+L + LQA + + ++ P A+MLS +LY +R FPYYV +L G+D GK
Sbjct: 78 CDTLTLTRLLQARMQMYEHEHNKAMTTPAVAQMLSTMLYYKRFFPYYVSNILAGLDADGK 137
Query: 123 GGVYSYDPVGHCEKVAYRLHGTS 145
G +YSYDP+GHCE+ YR G++
Sbjct: 138 GCIYSYDPIGHCERSTYRAGGSA 160
>gi|195328187|ref|XP_002030798.1| GM24382 [Drosophila sechellia]
gi|195590871|ref|XP_002085168.1| GD12455 [Drosophila simulans]
gi|194119741|gb|EDW41784.1| GM24382 [Drosophila sechellia]
gi|194197177|gb|EDX10753.1| GD12455 [Drosophila simulans]
Length = 235
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DFA+IA+DTR SS I S Q K+F+L QT +G +G AD+L +
Sbjct: 25 YESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSTGCWADTLSL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + ++ A+MLS+ +Y RR FPYYV +L GID GKG VYSY
Sbjct: 85 TGSMKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR GT+ +
Sbjct: 145 DPIGHCEKATYRAGGTAGTLL 165
>gi|307170452|gb|EFN62722.1| Proteasome subunit beta type-1 [Camponotus floridanus]
Length = 236
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG DF +IA+DTR S+ +I + Q K+F L N T +G SG D+L +
Sbjct: 28 YSDNGGSVVALAGDDFCVIAADTRLSTGFSIYTREQDKLFPLSNTTILGCSGCWCDTLTL 87
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + ++ P A+MLS++LY +R FPYYV +L G+D GKG +YSY
Sbjct: 88 TRLLSARMQMYKHEHQKEMTTPAAAQMLSIMLYHKRFFPYYVSNILAGLDENGKGCIYSY 147
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR G++ +
Sbjct: 148 DPIGHCEKTTYRAGGSAGALL 168
>gi|392868|gb|AAC46465.1| proteasome subunit [Drosophila melanogaster]
Length = 235
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DFA+IA+DTR SS I S Q K+F+L QT +G +G AD+L +
Sbjct: 25 YESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + ++ A+MLS+ +Y RR FPYYV +L GID GKG VYSY
Sbjct: 85 TGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR GT+ +
Sbjct: 145 DPIGHCEKATYRAGGTAGTLL 165
>gi|17737605|ref|NP_524115.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|12643277|sp|P40304.2|PSB1_DROME RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome 26 kDa subunit; Flags: Precursor
gi|7294080|gb|AAF49435.1| proteasome 26kD subunit [Drosophila melanogaster]
gi|15291705|gb|AAK93121.1| LD24159p [Drosophila melanogaster]
gi|220947536|gb|ACL86311.1| Pros26-PA [synthetic construct]
Length = 235
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 97/172 (56%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DFA+IA+DTR SS I S Q K+F+L QT +G +G AD+L +
Sbjct: 25 YESNGGSIVAIAGDDFAVIAADTRLSSGYNIHSRTQSKLFKLSPQTVLGSAGCWADTLSL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + ++ A+MLS+ +Y RR FPYYV +L GID GKG VYSY
Sbjct: 85 TGSIKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGIDNEGKGVVYSY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPV 180
DP+GHCEK YR GT+ + + + + D I + E V
Sbjct: 145 DPIGHCEKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSV 196
>gi|194750661|ref|XP_001957648.1| GF10515 [Drosophila ananassae]
gi|190624930|gb|EDV40454.1| GF10515 [Drosophila ananassae]
Length = 235
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 92/147 (62%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG+++AIAG DF +IA+DTR SS I S +Q K+F+L +QT +G +G
Sbjct: 19 QADFSPYESNGGSIVAIAGDDFVVIAADTRLSSGYNIHSRDQSKLFKLSDQTVLGSTGCW 78
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD+L + L+ + + ++ A+MLS+ +Y RR FPYYV +L GID GK
Sbjct: 79 ADTLSLTGLLKVRMQGYEHTHLRTMATDAVAQMLSITMYNRRFFPYYVSNILAGIDKDGK 138
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYSYDP+GHCE+ YR GT+ +
Sbjct: 139 GVVYSYDPIGHCERAFYRAGGTAGTLL 165
>gi|307214019|gb|EFN89226.1| Proteasome subunit beta type-1 [Harpegnathos saltator]
Length = 236
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG DF ++A+DTR S+ +I + Q K+F L T +G SG D+L +
Sbjct: 28 YADNGGSVVALAGDDFCVVAADTRLSTGFSIYTRQQDKLFPLSKTTILGCSGCWCDTLTL 87
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + +S P TA+MLS +LY +R FPYYV +L G+D GKG +YSY
Sbjct: 88 TRLLSARMQMYKHEHQKEMSTPATAQMLSTMLYYKRFFPYYVSNILAGLDENGKGCIYSY 147
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR G++ +
Sbjct: 148 DPIGHCEKTTYRAGGSAGALL 168
>gi|157119738|ref|XP_001659482.1| proteasome subunit beta type [Aedes aegypti]
gi|108875198|gb|EAT39423.1| AAEL008770-PA [Aedes aegypti]
Length = 231
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 92/141 (65%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+AIAG DFA+I +DTR SS +I + Q K+FR+ ++T + +G D+L +
Sbjct: 23 YESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRMSDRTVLASTGCWCDTLAL 82
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
S ++ + + + ++ P A+MLS+L+Y RR FPYYV +L G+D GKG +YSY
Sbjct: 83 TSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDADGKGVIYSY 142
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR G++ +
Sbjct: 143 DPIGHCEKTTYRAGGSAGPLL 163
>gi|158293754|ref|XP_315096.4| AGAP004991-PA [Anopheles gambiae str. PEST]
gi|157016597|gb|EAA10482.4| AGAP004991-PA [Anopheles gambiae str. PEST]
Length = 231
Score = 132 bits (333), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 91/141 (64%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+AIAG DFA+I +DTR SS +I + Q K+FRL ++T + +G D+L +
Sbjct: 23 YESNGGSVVAIAGEDFAVIGADTRLSSGYSIHTRTQNKLFRLSDKTVLASTGCWCDTLAL 82
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
S ++ + + + +S P A+MLS+L+Y RR FPYYV +L G+D GKG VYSY
Sbjct: 83 TSLVKVRMQMYKDQHQKNMSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDQDGKGVVYSY 142
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCE YR G++ +
Sbjct: 143 DPIGHCEMTTYRAGGSAGPLL 163
>gi|346472379|gb|AEO36034.1| hypothetical protein [Amblyomma maculatum]
Length = 232
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 92/147 (62%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y ++GG+++AIAG DFA+IASD+R S+ +I + Q K+F+L NQ +G +G
Sbjct: 18 QAYFSPYSENGGSIVAIAGEDFAVIASDSRLSTGYSIYTREQSKLFKLSNQCVLGSTGCW 77
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L L+A + + +S P A+++ +LY +R FPYY+ +L G+D GK
Sbjct: 78 CDILTFTRFLEARMKMYLHEHHRLMSTPAVAQLVVTMLYNKRFFPYYISNILAGLDEDGK 137
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G +Y YDPVGHCE+V YR G+S+ +
Sbjct: 138 GCIYCYDPVGHCERVQYRAGGSSSALL 164
>gi|151301141|ref|NP_001093092.1| proteasome beta subunit [Bombyx mori]
gi|95102764|gb|ABF51323.1| proteasome beta subunit [Bombyx mori]
Length = 232
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 90/141 (63%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
E Y +GG+++AIAG D+A+I +DTR S+ +I + +Q K+F+L T +G +G D+
Sbjct: 21 FEPYADNGGSIVAIAGDDYAVIGADTRLSTGFSIYTRDQKKLFKLSESTVLGATGCWCDT 80
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
L + LQA + + ++ P A+MLS +LY +R FPYYV +L G+D GKG V
Sbjct: 81 LTLTRLLQARMQMYEHEHNKSMTTPAVAQMLSTMLYYKRFFPYYVSNVLAGLDSDGKGCV 140
Query: 126 YSYDPVGHCEKVAYRLHGTSA 146
YSYDP+GHC + +R G++A
Sbjct: 141 YSYDPIGHCARHNFRAGGSAA 161
>gi|170035625|ref|XP_001845669.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
gi|167877642|gb|EDS41025.1| proteasome subunit beta type 1 [Culex quinquefasciatus]
Length = 231
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 90/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+AIAG DFA+I +DTR SS +I + Q K+FRL T + +G D+L +
Sbjct: 23 YESNGGSVVAIAGDDFAVIGADTRLSSGYSIHTRTQNKLFRLSEGTVLASTGCWCDTLAL 82
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
S ++ + + + ++ P A+MLS+L+Y RR FPYYV +L G+D G+G VYSY
Sbjct: 83 TSLVKVRMQMYKDQHQKNMTTPAVAQMLSILMYNRRFFPYYVSNVLAGLDEEGRGVVYSY 142
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCEK YR G++ +
Sbjct: 143 DPIGHCEKTTYRAGGSAGPLL 163
>gi|195375426|ref|XP_002046502.1| GJ12457 [Drosophila virilis]
gi|194153660|gb|EDW68844.1| GJ12457 [Drosophila virilis]
Length = 235
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 90/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DF +IA+DTR SS +I S +Q K+F++ +T +G +G D+L +
Sbjct: 25 YESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKMSPKTVLGSTGCWCDTLSL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + +S A+MLS+++Y RR FPYYV +L G+D GKG VYSY
Sbjct: 85 TGLVKVRMQMYEHTHMKTMSTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGAVYSY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCE+ YR GT+ +
Sbjct: 145 DPIGHCERATYRAGGTAGALL 165
>gi|195016569|ref|XP_001984439.1| GH16458 [Drosophila grimshawi]
gi|193897921|gb|EDV96787.1| GH16458 [Drosophila grimshawi]
Length = 235
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 104/175 (59%), Gaps = 10/175 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DF +IA+DTR SS +I S +Q K+F+L T +G +G D+L +
Sbjct: 25 YESNGGSIVAIAGEDFVVIAADTRLSSGYSIHSRDQSKLFKLSPHTVLGSTGCWCDTLSL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + ++ A+MLS+++Y RR FPYYV +L G+D GKG VYSY
Sbjct: 85 TGLMKVRMQMYEHTHMKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGVVYSY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSP-YESEFDYTDVITMALEELTPVVK 182
DP+GHCE+ YR GT+ LL P +++ Y + +A ++L P+ K
Sbjct: 145 DPIGHCERATYRAGGTAGS--------LLQPVLDNQIGYKNQ-NLAADQLPPLTK 190
>gi|195135135|ref|XP_002011990.1| GI16713 [Drosophila mojavensis]
gi|193918254|gb|EDW17121.1| GI16713 [Drosophila mojavensis]
Length = 235
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 105/175 (60%), Gaps = 10/175 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DF +IA+DTR SS +I S +Q K+F + +T +G +G D+L +
Sbjct: 25 YESNGGSIVAIAGDDFVVIAADTRLSSGYSIHSRDQSKLFEMSPKTVLGSTGCWCDTLSL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + ++ A+MLS+++Y RR FPYYV +L G+D GKG VYSY
Sbjct: 85 TGLVKVRMQMYEHTHLKTMTTDAVAQMLSIVMYNRRFFPYYVSNILAGLDKDGKGAVYSY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSP-YESEFDYTDVITMALEELTPVVK 182
DP+GHCE+ YR G++ LL P +++ Y + ++L++L P+ K
Sbjct: 145 DPIGHCERATYRAGGSAGA--------LLQPVLDNQIGYKNQ-NLSLDQLPPLTK 190
>gi|125977126|ref|XP_001352596.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|195168113|ref|XP_002024876.1| GL17976 [Drosophila persimilis]
gi|54641344|gb|EAL30094.1| GA17955 [Drosophila pseudoobscura pseudoobscura]
gi|194108306|gb|EDW30349.1| GL17976 [Drosophila persimilis]
Length = 235
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 90/149 (60%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISG 60
++ A Y +GG+++AIAG DF +IA+DTR SS I + Q K+F L NQT + +G
Sbjct: 17 VSHADFSPYESNGGSIVAIAGEDFVVIAADTRLSSGYNIHTRKQSKLFPLSNQTVLASTG 76
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
D+L + ++ + + ++ A+MLS+++Y RR FPYYV +L GID
Sbjct: 77 CWCDTLSLTGLMKLRMQNYEHTHLKTMTTDAVAQMLSIIMYNRRFFPYYVSNILAGIDKD 136
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
GKG V+SYDP+GHCE+ YR GT+ +
Sbjct: 137 GKGVVFSYDPIGHCERATYRAGGTAGALL 165
>gi|195441689|ref|XP_002068635.1| GK20318 [Drosophila willistoni]
gi|194164720|gb|EDW79621.1| GK20318 [Drosophila willistoni]
Length = 233
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DFA+IA+DTR SS I + Q K+F+L + +G +G +D+L +
Sbjct: 23 YESNGGSIVAIAGEDFAVIAADTRLSSGYNIHTRTQNKLFKLSENSVLGSTGCWSDTLSL 82
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+ + + +S A+MLS+ +Y RR FPYYV +L G+D GKG VYSY
Sbjct: 83 TGLLKVRMQMYEHTHLKVMSTDALAQMLSITMYNRRFFPYYVSNILAGVDKDGKGVVYSY 142
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCE+ YR GT+ +
Sbjct: 143 DPIGHCERATYRAGGTAGPLL 163
>gi|442749997|gb|JAA67158.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Ixodes ricinus]
Length = 232
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DF +IASD+R S+ I + +Q K+F+L ++ +G G D L
Sbjct: 24 YSDNGGSIVAIAGEDFVVIASDSRLSAGYHIYTRDQSKLFKLSDKCILGSGGCWCDILTF 83
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+A + +P+S P A+++ +LY +R FPYY+ +L G+D GKG +YSY
Sbjct: 84 TRFLEARMKMYLHEHHKPMSTPAVAQLIVTMLYHKRFFPYYISNILAGLDEEGKGCIYSY 143
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVGHCE+V YR G+ + +
Sbjct: 144 DPVGHCERVQYRSGGSGSALL 164
>gi|383853088|ref|XP_003702056.1| PREDICTED: proteasome subunit beta type-1-like [Megachile
rotundata]
Length = 236
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 86/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG DF +IA+DTR S +I + Q K+F L ++T +G SG D+L +
Sbjct: 28 YADNGGSVIALAGDDFCVIAADTRLSVGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTL 87
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + ++ P A+MLS +LY RR FPYY+ ++ G+D G G VYSY
Sbjct: 88 TRFLSARMQMYEHEHQKEMATPAVAQMLSTMLYYRRFFPYYISNIIGGLDDKGHGCVYSY 147
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCE YR G++ +
Sbjct: 148 DPIGHCEAAKYRAGGSAGALL 168
>gi|195398909|ref|XP_002058063.1| GJ15696 [Drosophila virilis]
gi|194150487|gb|EDW66171.1| GJ15696 [Drosophila virilis]
Length = 256
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 90/144 (62%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GGTV+AIAG +F +IASDTR S +I + +Q K+F + V +G D++ + S
Sbjct: 48 NGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSL 107
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
LQ I + +P+S A+M+S+++Y RR FPY+ +L GID GKG VY YDPV
Sbjct: 108 LQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYYDPV 167
Query: 132 GHCEKVAYRLHGTSAKFMLASMSY 155
GH E+ YR+ G+S K +L ++ +
Sbjct: 168 GHMERCRYRVLGSSGKMLLPALDH 191
>gi|195398923|ref|XP_002058070.1| GJ15881 [Drosophila virilis]
gi|194150494|gb|EDW66178.1| GJ15881 [Drosophila virilis]
Length = 262
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 90/144 (62%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GGTV+AIAG +F +IASDTR S +I + +Q K+F + V +G D++ + S
Sbjct: 54 NGGTVLAIAGEEFVVIASDTRICSGLSIETRDQSKVFPMTPLAMVASTGLWCDTISMTSL 113
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
LQ I + +P+S A+M+S+++Y RR FPY+ +L GID GKG VY YDPV
Sbjct: 114 LQIRIQMYEQEHNKPISTDALAQMISIVMYNRRFFPYHTCTILAGIDQAGKGAVYYYDPV 173
Query: 132 GHCEKVAYRLHGTSAKFMLASMSY 155
GH E+ YR+ G+S K +L ++ +
Sbjct: 174 GHMERCRYRVLGSSGKMLLPALDH 197
>gi|195439248|ref|XP_002067543.1| GK16137 [Drosophila willistoni]
gi|194163628|gb|EDW78529.1| GK16137 [Drosophila willistoni]
Length = 229
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
+ YV +GG+++AIAG DF IA DTR + + IVS +Q K+F+L TA+G G AD
Sbjct: 23 FDPYVCNGGSIVAIAGEDFVTIAGDTRMVNEDDAIVSRSQSKLFQLTPMTAIGSVGCFAD 82
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+L VV+ ++ I+ + +S A+MLS+ +Y R FPY+V ++ GID GKG
Sbjct: 83 TLAVVNVIKQNIHMYQLTHLKRISTDALAQMLSISMYSHRFFPYFVSNIVAGIDRNGKGA 142
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
V+SYDP+GH E+ AY GT + M+ +M Y +
Sbjct: 143 VFSYDPIGHHERKAYDAAGTGFELMIPAMDYFIK 176
>gi|242247122|ref|NP_001156136.1| proteasome subunit beta type-like [Acyrthosiphon pisum]
gi|239799300|dbj|BAH70578.1| ACYPI003417 [Acyrthosiphon pisum]
Length = 222
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 90/144 (62%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
E Y +GG+++AI+G DFA++ASDTR S I + Q K+F+L +++ +G +G D+
Sbjct: 15 FEPYASNGGSIVAISGKDFAIVASDTRLSEGYMIYTRKQSKLFQLSDKSVLGCTGCWCDT 74
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
L + + +Q+++ + A++LS LLY RR FPYYV +L G+D G+G +
Sbjct: 75 LSLTNIIQSQLKSYLYDHNTIMQPNSIAQLLSTLLYSRRFFPYYVYNVLAGLDINGEGCL 134
Query: 126 YSYDPVGHCEKVAYRLHGTSAKFM 149
YSYDPVGHCEKV Y G+S M
Sbjct: 135 YSYDPVGHCEKVNYTAGGSSGVLM 158
>gi|427787323|gb|JAA59113.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Rhipicephalus pulchellus]
Length = 232
Score = 125 bits (315), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y ++GG+++A+AG DFA+IASD+R SS I + Q K+F+L NQ +G +G
Sbjct: 18 QAHFNPYSENGGSIVAVAGDDFAVIASDSRLSSGYHIHTREQSKLFKLSNQCVLGSTGCW 77
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L L+A + + +S P A+++ +LY +R FPYY+ +L G+D GK
Sbjct: 78 CDILTFTRFLEARMKMYLHEHHKLMSTPAVAQLIVTMLYNKRFFPYYISNILAGLDEEGK 137
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G +Y YDPVGH E+V YR G+S+ +
Sbjct: 138 GCIYCYDPVGHSERVQYRAGGSSSALL 164
>gi|66512107|ref|XP_395163.2| PREDICTED: proteasome subunit beta type-1 [Apis mellifera]
Length = 236
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 87/141 (61%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG +F +IA+DTR S+ +I + Q K+F L ++T +G SG D+L +
Sbjct: 28 YADNGGSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTL 87
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + + P A+MLS +LY +R FPYYV +L G+D GKG VYSY
Sbjct: 88 TRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKGCVYSY 147
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCE YR G++ +
Sbjct: 148 DPIGHCEITKYRAGGSAGALL 168
>gi|289742321|gb|ADD19908.1| 20S proteasome regulatory subunit beta type PSMB1/PRE7 [Glossina
morsitans morsitans]
Length = 236
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 91/141 (64%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DFA+IA+D+R SS TI + N+ K+F+L + +G +G D+L +
Sbjct: 25 YESNGGSIVAIAGNDFAVIAADSRLSSGYTIHTRNENKLFQLSSNAVLGSTGCWCDTLAL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ ++A + + +S TA+MLS+L+Y RR FPYYV +L G++ GKG VYSY
Sbjct: 85 TALVKARMQMYEHTHSKTMSTDATAQMLSILMYNRRFFPYYVSNVLAGLNSEGKGVVYSY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GH EK R G++ +
Sbjct: 145 DPIGHFEKSNSRAGGSAGALL 165
>gi|350396993|ref|XP_003484732.1| PREDICTED: proteasome subunit beta type-1-like [Bombus impatiens]
Length = 236
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 86/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG DF +IA+DTR S+ +I + Q K+F L ++T +G SG D+L +
Sbjct: 28 YADNGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTL 87
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + + A+MLS +LY +R FPYYV +L G+D GKG VYSY
Sbjct: 88 TRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCVYSY 147
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCE YR G++ +
Sbjct: 148 DPIGHCEVTKYRAGGSAGALL 168
>gi|340716619|ref|XP_003396794.1| PREDICTED: proteasome subunit beta type-1-like [Bombus terrestris]
Length = 236
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 86/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG DF +IA+DTR S+ +I + Q K+F L ++T +G SG D+L +
Sbjct: 28 YADNGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTL 87
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + + A+MLS +LY +R FPYYV +L G+D GKG VYSY
Sbjct: 88 TRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDEDGKGCVYSY 147
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+GHCE YR G++ +
Sbjct: 148 DPIGHCEVTKYRAGGSAGALL 168
>gi|225711612|gb|ACO11652.1| Proteasome subunit beta type-1 precursor [Caligus rogercresseyi]
Length = 238
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 85/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT + IAG DF +IASDTR +S+ I+S N KIF L + +G G D L
Sbjct: 30 YQDNGGTTVGIAGSDFVVIASDTRLASSYDILSRNVPKIFELGSGCVLGSCGCWCDVLTF 89
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ ++++ G+ L+ P A+MLS LY RR FPYY+ +L G+D G+G +Y+Y
Sbjct: 90 IRVAESKLKDYHYTHGKELNTPALAQMLSNTLYRRRFFPYYIHNVLAGLDEKGQGVIYTY 149
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVGHCEKV GTS + +
Sbjct: 150 DPVGHCEKVKMSCGGTSMELI 170
>gi|156547425|ref|XP_001605493.1| PREDICTED: proteasome subunit beta type-1-like isoform 1 [Nasonia
vitripennis]
gi|345484470|ref|XP_003425047.1| PREDICTED: proteasome subunit beta type-1-like isoform 2 [Nasonia
vitripennis]
Length = 236
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 85/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+V+A+AG DF+LIA+D+R S+ +I + Q K+F L + +G SG D L +
Sbjct: 28 YADNGGSVVALAGDDFSLIAADSRLSAGFSIYTRKQQKLFTLSETSVLGCSGCWCDILTL 87
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ A + + +S P A+MLS +LY +R FPYY+ +L G+D GKG +Y Y
Sbjct: 88 TRVMAARMQMYKHEHHKTMSTPAAAQMLSTMLYYKRFFPYYINNILAGLDEEGKGVIYRY 147
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVGHCEK Y G++ +
Sbjct: 148 DPVGHCEKNTYVAGGSAGALL 168
>gi|281210614|gb|EFA84780.1| proteasome subunit beta type 1 [Polysphondylium pallidum PN500]
Length = 235
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQ-LKIFRLPNQTAVGIS 59
M +A E YV +GGTV+AIAG D+ +IA DTR S G + Q KIF+L N+ + S
Sbjct: 17 MRQARFEPYVDNGGTVLAIAGSDYCVIAGDTRMSDGGYGIQTRQYTKIFQLTNKCVIATS 76
Query: 60 GNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG 119
G AD+L + RL+ ++R + G+P+S P ++ LS LY++R FPYY L+ G+D
Sbjct: 77 GMQADTLALRKRLETVLSRYQKEHGKPMSTPAISQYLSNTLYQKRFFPYYTFNLVCGVDE 136
Query: 120 TGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G G +++YD VG E+V G+ + +
Sbjct: 137 DGVGCIWTYDAVGSHERVKMSSQGSGNQLV 166
>gi|226372486|gb|ACO51868.1| Proteasome subunit beta type-1-A [Rana catesbeiana]
Length = 240
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+A+AG DFAL+ASDTR S + +I S N K ++L ++T +G SG D L +
Sbjct: 32 YTFNGGTVLALAGEDFALVASDTRLSEDYSIHSRNTPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIEARLKMYKHSNNKTMTSNAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 151
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ AY+ G+++ +
Sbjct: 152 DPVGSYQRDAYKAGGSASAML 172
>gi|148227103|ref|NP_001080435.1| proteasome beta 1 subunit [Xenopus laevis]
gi|27694605|gb|AAH43739.1| Psmb1-prov protein [Xenopus laevis]
gi|114107802|gb|AAI23122.1| Psmb1 protein [Xenopus laevis]
Length = 239
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 90/147 (61%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFAL+ASDTR S +I S N K ++L ++T +G +G
Sbjct: 25 EQRFNPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCTGFH 84
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 85 ADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 144
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ AY+ G+++ +
Sbjct: 145 GAVYSFDPVGSYQRDAYKAGGSASAML 171
>gi|225714644|gb|ACO13168.1| Proteasome subunit beta type-1 precursor [Lepeophtheirus salmonis]
Length = 238
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT + IAG DF +IASDTR ++ I+S + K+F L + +G SG D L
Sbjct: 30 YQDNGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTF 89
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V ++ I G+ +S A+MLS+ LY +R FPYY+ +L G+D G+G +++Y
Sbjct: 90 VRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIFTY 149
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVV 181
DPVGHCEKV G S + + + ++ + +++ ++++E +V
Sbjct: 150 DPVGHCEKVKISCGGASMEMIQPILDNVIE--KKNMTNAELVDLSIDETVNIV 200
>gi|45360639|ref|NP_988993.1| proteasome beta 1 subunit [Xenopus (Silurana) tropicalis]
gi|38174388|gb|AAH61284.1| proteasome (prosome, macropain) subunit, beta type, 1 [Xenopus
(Silurana) tropicalis]
gi|89272031|emb|CAJ83174.1| proteasome (prosome macropain) subunit beta type 1 [Xenopus
(Silurana) tropicalis]
Length = 239
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 89/147 (60%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFAL+ASDTR S +I S N K ++L + T +G +G
Sbjct: 25 EQRFNPYTFNGGTVLALAGDDFALVASDTRLSEGYSIHSRNTPKCYKLTDNTVIGCTGFH 84
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 85 ADCLTLTKIIEARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 144
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ AY+ G+++ +
Sbjct: 145 GAVYSFDPVGSYQRDAYKAGGSASAML 171
>gi|290562593|gb|ADD38692.1| Proteasome subunit beta type-1 [Lepeophtheirus salmonis]
Length = 238
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 2/173 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT + IAG DF +IASDTR ++ I+S + K+F L + +G SG D L
Sbjct: 30 YQDNGGTTIGIAGKDFVVIASDTRLCNSYDILSRDVPKVFDLGGNSVLGASGCWCDVLTF 89
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ ++ I G+ +S A+MLS+ LY +R FPYY+ +L G+D G+G +++Y
Sbjct: 90 IRVAESRIKNYNYTHGKEMSTSALAQMLSITLYRKRFFPYYIHNVLAGLDDEGRGAIFTY 149
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVV 181
DPVGHCEKV G S + + + ++ + +++ ++++E +V
Sbjct: 150 DPVGHCEKVKISCGGASMEMIQPILDNVIE--KKNMTNAELVDLSIDETVNIV 200
>gi|225719776|gb|ACO15734.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 271
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMAD 64
+ Y +GGT + IAGPDFA+IASDTR +S G I+S N K+F+L ++ +G G D
Sbjct: 59 FQPYQDNGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLGSCGCWCD 118
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
L V +++++ + G+ L P A+++S LY+RR PYY+ +L G+D G+G
Sbjct: 119 VLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLDENGQGC 178
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFM 149
+Y+YDPVG EKV G S + +
Sbjct: 179 IYTYDPVGCIEKVTMSCSGASMELI 203
>gi|225719280|gb|ACO15486.1| Proteasome subunit beta type-1 precursor [Caligus clemensi]
Length = 239
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMAD 64
+ Y +GGT + IAGPDFA+IASDTR +S G I+S N K+F+L ++ +G G D
Sbjct: 27 FQPYQDNGGTTIGIAGPDFAVIASDTRLTSGGYDILSRNVPKVFQLSEKSVLGSCGCWCD 86
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
L V +++++ + G+ L P A+++S LY+RR PYY+ +L G+D G+G
Sbjct: 87 VLTFVRVMESKMKNYSYTHGKDLGTPALAQLISNSLYQRRFLPYYIHNVLAGLDENGQGC 146
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFM 149
+Y+YDPVG EKV G S + +
Sbjct: 147 IYTYDPVGCIEKVTMSCSGASMELI 171
>gi|156365620|ref|XP_001626742.1| predicted protein [Nematostella vectensis]
gi|156213630|gb|EDO34642.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AI+G DFA+IASDTR S I + + K+++L T +G SG D L +
Sbjct: 21 YAFNGGTVLAISGEDFAVIASDTRLSQGFQIHTRDSPKVYKLTGSTVLGCSGFHGDCLTL 80
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ A + G+ +S A+MLS +LY RR FPYY +L G+D GKG V+S+
Sbjct: 81 TKHISARLQMYEHDHGKAMSCTAIAQMLSTMLYYRRFFPYYTYNILAGLDSEGKGCVFSF 140
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG E+ YR G+++ +
Sbjct: 141 DPVGSYEREVYRAGGSASALL 161
>gi|349805257|gb|AEQ18101.1| putative proteasome beta 1 subunit [Hymenochirus curtipes]
Length = 205
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 87/137 (63%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGTV+A+AG DFA++ASDTR S +I S N K ++L ++T +G SG AD L + +
Sbjct: 1 GGTVLALAGEDFAIVASDTRLSEGYSIHSRNTPKCYKLTDKTVIGCSGFHADCLTLTKII 60
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+DPVG
Sbjct: 61 EARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVG 120
Query: 133 HCEKVAYRLHGTSAKFM 149
++ AY+ G+++ +
Sbjct: 121 SYQRDAYKAGGSASAML 137
>gi|380018248|ref|XP_003693045.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Apis florea]
Length = 237
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Query: 9 YVQHGG-TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y +GG +V+A+AG +F +IA+DTR S+ +I + Q K+ L ++T +G SG D+L
Sbjct: 28 YADNGGKSVIALAGDNFCVIAADTRLSTGFSIYTREQQKLXPLSSKTVLGCSGCWCDTLT 87
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ L A + + + P A+MLS +LY +R FPYYV +L G+D GKG VYS
Sbjct: 88 LTRILSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDENGKGCVYS 147
Query: 128 YDPVGHCEKVAYRLHGTSAKFM 149
YDP+GHCE YR G++ +
Sbjct: 148 YDPIGHCEITKYRAGGSAGALL 169
>gi|330791448|ref|XP_003283805.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
gi|325086304|gb|EGC39696.1| hypothetical protein DICPUDRAFT_45058 [Dictyostelium purpureum]
Length = 236
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGIS 59
+ E YV +GGTVMA+AG D+ +IA DTR S G I + + K+F+L N+ + S
Sbjct: 18 INHGRFEAYVDNGGTVMAVAGKDYCVIAGDTRMSDGGYGIQTRHYTKVFQLTNKCVLATS 77
Query: 60 GNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG 119
G AD++ + RL+ + + G+P+S P A+ LS LY +R FPYY L+ G+D
Sbjct: 78 GMQADTIALQKRLKLMLETYQKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDE 137
Query: 120 TGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+G +++YD VG E+V Y G+ + ++
Sbjct: 138 KGEGWIWTYDAVGSHERVKYSSQGSGNQLVI 168
>gi|62897947|dbj|BAD96913.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 241
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K +RL ++T +G SG D L +
Sbjct: 33 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYRLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|19115641|ref|NP_594729.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe 972h-]
gi|17380232|sp|Q9UQY2.1|PSB6_SCHPO RecName: Full=Probable proteasome subunit beta type-6
gi|5734483|emb|CAB52716.1| 20S proteasome component beta 6 [Schizosaccharomyces pombe]
gi|6681370|dbj|BAA88692.1| catalytic subunit (C5) of proteasome [Schizosaccharomyces pombe]
Length = 225
Score = 115 bits (289), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 90/149 (60%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISG 60
M+++ + YVQ+GGT +AIAG FA++A DTRS + I + Q ++ + + +G SG
Sbjct: 1 MSQSQFDPYVQNGGTTVAIAGDGFAILAGDTRSVNGYNINTRFQPRVHEVGDDLVIGASG 60
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD+L +V R+Q I+ + + +S A M+ LLY +R FPYYV + GID
Sbjct: 61 FEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKE 120
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
GKG +YS+DPVG E+ R G++A F+
Sbjct: 121 GKGEIYSFDPVGSYEREWCRAGGSAANFI 149
>gi|391338616|ref|XP_003743654.1| PREDICTED: proteasome subunit beta type-1-like [Metaseiulus
occidentalis]
Length = 233
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 84/145 (57%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ Y + GT++ IAG DFA+I SD R S +I S +Q K+F+L ++ +G SG AD
Sbjct: 22 FDPYRDNAGTLVGIAGEDFAVIGSDLRLSLGFSIFSRDQSKLFKLTDRAVLGSSGCWADC 81
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+ + L+ + QP+S A+ S +LY RR FPY+ +L GID GKG +
Sbjct: 82 VSLNKFLEIRLKTYGFEHNQPMSTKAIAQCCSTMLYSRRFFPYFAWNILAGIDEDGKGAI 141
Query: 126 YSYDPVGHCEKVAYRLHGTSAKFML 150
YSYDPVG+ E+V Y+ G S +L
Sbjct: 142 YSYDPVGNFERVPYQAAGNSGPQVL 166
>gi|297678538|ref|XP_002817127.1| PREDICTED: proteasome subunit beta type-1-like [Pongo abelii]
gi|297679681|ref|XP_002817653.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pongo abelii]
Length = 241
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGTV+AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YVFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|111226971|ref|XP_001134620.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
gi|74926737|sp|Q86A21.1|PSB1_DICDI RecName: Full=Proteasome subunit beta type-1
gi|90971293|gb|EAS66954.1| proteasome subunit beta type 1 [Dictyostelium discoideum AX4]
Length = 236
Score = 115 bits (288), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 1/151 (0%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGIS 59
++ E YV +GGTV+A+AG D+ +IA DTR S G I + KIF+L + + S
Sbjct: 18 ISHGRFEAYVDNGGTVLAVAGKDYCVIAGDTRMSDGGYGIQTRKYTKIFQLTKKCVLATS 77
Query: 60 GNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG 119
G AD++ + RL++ + + G+P+S P A+ LS LY +R FPYY L+ G+D
Sbjct: 78 GMQADTIALQKRLKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDE 137
Query: 120 TGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+G +++YD VG E+V Y G+ + ++
Sbjct: 138 QGEGWIWTYDAVGSHERVKYSSQGSGNQLVI 168
>gi|21465654|pdb|1IRU|M Chain M, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465668|pdb|1IRU|1 Chain 1, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 213
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 5 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 64
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 65 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 124
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 125 DPVGSYQRDSFKAGGSASAML 145
>gi|12653473|gb|AAH00508.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|157928354|gb|ABW03473.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|157928990|gb|ABW03780.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
Length = 241
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|54696302|gb|AAV38523.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|54696304|gb|AAV38524.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|61367228|gb|AAX42969.1| proteasome subunit beta type 1 [synthetic construct]
gi|61367236|gb|AAX42970.1| proteasome subunit beta type 1 [synthetic construct]
Length = 242
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|4506193|ref|NP_002784.1| proteasome subunit beta type-1 [Homo sapiens]
gi|114610308|ref|XP_001140101.1| PREDICTED: proteasome subunit beta type-1 isoform 4 [Pan
troglodytes]
gi|332825501|ref|XP_003311646.1| PREDICTED: proteasome subunit beta type-1 [Pan troglodytes]
gi|397502108|ref|XP_003821710.1| PREDICTED: proteasome subunit beta type-1 isoform 1 [Pan paniscus]
gi|397502110|ref|XP_003821711.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pan paniscus]
gi|397502112|ref|XP_003821712.1| PREDICTED: proteasome subunit beta type-1 isoform 3 [Pan paniscus]
gi|130853|sp|P20618.2|PSB1_HUMAN RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|220026|dbj|BAA00658.1| proteasome subunit C5 [Homo sapiens]
gi|18088777|gb|AAH20807.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|54696306|gb|AAV38525.1| proteasome (prosome, macropain) subunit, beta type, 1 [Homo
sapiens]
gi|61357229|gb|AAX41355.1| proteasome subunit beta type 1 [synthetic construct]
gi|197692325|dbj|BAG70126.1| proteasome beta 1 subunit [Homo sapiens]
gi|197692585|dbj|BAG70256.1| proteasome beta 1 subunit [Homo sapiens]
gi|261860708|dbj|BAI46876.1| proteasome (prosome, macropain) subunit, beta type, 1 [synthetic
construct]
gi|410210668|gb|JAA02553.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410259166|gb|JAA17549.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410301642|gb|JAA29421.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
gi|410335833|gb|JAA36863.1| proteasome (prosome, macropain) subunit, beta type, 1 [Pan
troglodytes]
Length = 241
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|56118302|ref|NP_001007906.1| proteasome subunit beta type-1 [Gallus gallus]
gi|38680347|gb|AAR26544.1| proteasome subunit beta-type [Gallus gallus]
Length = 237
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 85/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF ++ASDTR S I S + K +RL QT +G SG D L +
Sbjct: 29 YTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYRLTEQTVIGCSGFHGDCLTL 88
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 89 TKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 148
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 149 DPVGSYQRDSFKAGGSASAML 169
>gi|332264007|ref|XP_003281040.1| PREDICTED: proteasome subunit beta type-1 [Nomascus leucogenys]
Length = 241
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGTV+AIAG DFA++ASDTR S ++ + + K ++L ++T +G SG D L +
Sbjct: 33 YVFNGGTVLAIAGEDFAIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|351714661|gb|EHB17580.1| Proteasome subunit beta type-1 [Heterocephalus glaber]
Length = 240
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 92/150 (61%), Gaps = 4/150 (2%)
Query: 4 AMLEH----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGIS 59
A L+H Y +GGTV+AIAG DF+++ASDTR S +I + N K ++L ++T +G S
Sbjct: 23 APLQHRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRNSPKCYKLTDKTVIGCS 82
Query: 60 GNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG 119
G D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+D
Sbjct: 83 GFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE 142
Query: 120 TGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
GKG VYS+DPVG ++ +++ G+++ +
Sbjct: 143 EGKGAVYSFDPVGSYQRDSFKAGGSASAML 172
>gi|62087736|dbj|BAD92315.1| proteasome beta 1 subunit variant [Homo sapiens]
Length = 196
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 38 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 97
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 98 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 157
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 158 DPVGSYQRDSFKAGGSASAML 178
>gi|443688987|gb|ELT91509.1| hypothetical protein CAPTEDRAFT_172055 [Capitella teleta]
Length = 229
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 87/147 (59%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG++MAIAG DFA++ASDTR S +I S N K ++L ++T + +G
Sbjct: 15 QAHFNPYSFNGGSIMAIAGDDFAVVASDTRLSEGFSIHSRNAPKTYKLTDKTVLASAGFH 74
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + L+A + G+ +S A ML+ +LY +R FPYYV ++ G+D GK
Sbjct: 75 GDVLTEIKVLEARLKMYEHEHGKKMSSQAIAAMLATILYHKRFFPYYVYNIIGGLDEEGK 134
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYSYDPVG E+ YR G++ +
Sbjct: 135 GCVYSYDPVGSYEREVYRAGGSAGPLL 161
>gi|395535314|ref|XP_003769673.1| PREDICTED: proteasome subunit beta type-1 [Sarcophilus harrisii]
Length = 244
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 89/141 (63%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 36 YVFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 95
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 96 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 155
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 156 DPVGSYQRDSFKAGGSASAML 176
>gi|410960369|ref|XP_003986764.1| PREDICTED: proteasome subunit beta type-1 [Felis catus]
Length = 241
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 89/147 (60%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+AIAG DF+++ASDTR S +I + + K +RL ++T +G SG
Sbjct: 27 EMRFSPYAFNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYRLTDKTVIGCSGFH 86
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 87 GDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 146
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ +++ G+++ +
Sbjct: 147 GAVYSFDPVGSYQRDSFKAGGSASAML 173
>gi|387017846|gb|AFJ51041.1| Proteasome subunit beta type-1-like [Crotalus adamanteus]
Length = 239
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 86/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AIAG DF ++ASDTR S + I S N K ++L + T +G SG D L +
Sbjct: 31 YTFNGGTILAIAGEDFVVVASDTRLSEDYAIHSRNSPKCYKLTDTTVIGCSGFHGDCLTL 90
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+A + + + +S A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 91 TKILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 150
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 151 DPVGSYQRDSFKAGGSASAML 171
>gi|384944338|gb|AFI35774.1| proteasome subunit beta type-1 precursor [Macaca mulatta]
Length = 241
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|432852541|ref|XP_004067299.1| PREDICTED: proteasome subunit beta type-1-B-like [Oryzias latipes]
Length = 237
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 87/148 (58%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
TE Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 22 TEHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGF 81
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D G
Sbjct: 82 HGDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEQG 141
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
KG VYS+DPVG ++ Y+ G+++ +
Sbjct: 142 KGAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|402868791|ref|XP_003898471.1| PREDICTED: proteasome subunit beta type-1 [Papio anubis]
Length = 241
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|386781057|ref|NP_001247565.1| proteasome subunit beta type-1 [Macaca mulatta]
gi|355562210|gb|EHH18842.1| hypothetical protein EGK_15528 [Macaca mulatta]
gi|355749047|gb|EHH53530.1| hypothetical protein EGM_14190 [Macaca fascicularis]
gi|380788877|gb|AFE66314.1| proteasome subunit beta type-1 [Macaca mulatta]
Length = 241
Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|121543861|gb|ABM55595.1| putative proteasome subunit, beta type, 1 [Maconellicoccus
hirsutus]
Length = 229
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GG+++A+ G DF +IASDTR S+ +I + +Q KIF+L +A+ +G
Sbjct: 15 EPRFNPYDDNGGSIVAVGGDDFVIIASDTRLSTGYSIYTRHQSKIFKLSKISALACAGCW 74
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
+D L + A + + +S P A+MLS ++Y +R FPYYV +L G++ G
Sbjct: 75 SDVLTFTRLINARMQMYLHEHNKEMSTPALAQMLSTMMYHKRFFPYYVSNILGGLEKDGS 134
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G +YSYDP+G+ E+ +R G+S +
Sbjct: 135 GWIYSYDPIGNMERSKFRAGGSSGALL 161
>gi|209732446|gb|ACI67092.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L N T +G SG
Sbjct: 23 EHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|47217169|emb|CAG11005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 237
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYTFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + +S A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|335955152|gb|AEH76582.1| proteasome subunit beta type [Epinephelus bruneus]
Length = 225
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 11 EHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 70
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 71 GDCLTLTKIIDARLKMYKHSNNKTMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 130
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 131 GAVYSFDPVGSYQRDTYKAGGSASAML 157
>gi|417397679|gb|JAA45873.1| Putative 20s proteasome regulatory subunit beta type psmb1/pre7
[Desmodus rotundus]
Length = 240
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AIAG DF+++ASDTR S +I S + K ++L ++T +G SG D L +
Sbjct: 32 YAFNGGTILAIAGEDFSIVASDTRLSEGFSIHSRDSPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 151
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 152 DPVGSYQRDSFKAGGSASAML 172
>gi|16758370|ref|NP_446042.1| proteasome subunit beta type-1 precursor [Rattus norvegicus]
gi|130854|sp|P18421.3|PSB1_RAT RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|56998|emb|CAA36987.1| proteasome subunit RC5 [Rattus norvegicus]
Length = 240
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 32 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSF 151
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 152 DPVGSYQRDSFKAGGSASAML 172
>gi|378792314|pdb|3UNB|L Chain L, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792328|pdb|3UNB|Z Chain Z, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792342|pdb|3UNB|NN Chain n, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792356|pdb|3UNB|2 Chain 2, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792370|pdb|3UNE|L Chain L, Mouse Constitutive 20s Proteasome
gi|378792384|pdb|3UNE|Z Chain Z, Mouse Constitutive 20s Proteasome
gi|378792398|pdb|3UNE|NN Chain n, Mouse Constitutive 20s Proteasome
gi|378792412|pdb|3UNE|2 Chain 2, Mouse Constitutive 20s Proteasome
gi|378792426|pdb|3UNF|L Chain L, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792440|pdb|3UNF|Z Chain Z, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792454|pdb|3UNH|L Chain L, Mouse 20s Immunoproteasome
gi|378792468|pdb|3UNH|Z Chain Z, Mouse 20s Immunoproteasome
Length = 213
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 5 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 64
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 65 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 124
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 125 DPVGSYQRDSFKAGGSASAML 145
>gi|440894478|gb|ELR46920.1| Proteasome subunit beta type-1, partial [Bos grunniens mutus]
Length = 241
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|346986249|ref|NP_001231282.1| proteasome subunit beta type-1 [Sus scrofa]
Length = 241
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|17380206|sp|Q9IB83.1|PSB1B_CARAU RecName: Full=Proteasome subunit beta type-1-B; AltName: Full=20S
proteasome beta-6 subunit B; Short=B6-B
gi|7768841|dbj|BAA95592.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 237
Score = 112 bits (281), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 87/147 (59%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFAL+ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+D G+
Sbjct: 83 GDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|296483812|tpg|DAA25927.1| TPA: proteasome beta 1 subunit precursor [Bos taurus]
Length = 241
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|17380207|sp|Q9IB84.1|PSB1A_CARAU RecName: Full=Proteasome subunit beta type-1-A; AltName: Full=20S
proteasome beta-6 subunit A; Short=B6-A
gi|7768839|dbj|BAA95591.1| 20S proteasome beta 6 subunit [Carassius auratus]
Length = 238
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 87/147 (59%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFAL+ASDTR S +I S + K ++L + T +G SG
Sbjct: 24 EHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 83
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+D G+
Sbjct: 84 GDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 143
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 144 GAVYSFDPVGSYQRDTYKAGGSASAML 170
>gi|7242197|ref|NP_035315.1| proteasome subunit beta type-1 precursor [Mus musculus]
gi|2499837|sp|O09061.1|PSB1_MOUSE RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Macropain subunit C5; AltName: Full=Multicatalytic
endopeptidase complex subunit C5; AltName:
Full=Proteasome component C5; AltName: Full=Proteasome
gamma chain; Flags: Precursor
gi|1165122|emb|CAA56701.1| component C5 of proteasome [Mus musculus]
gi|1698584|gb|AAB37251.1| proteasome beta-subunit C5 [Mus musculus]
gi|17390820|gb|AAH18351.1| Proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
gi|26346380|dbj|BAC36841.1| unnamed protein product [Mus musculus]
gi|39754751|gb|AAR30867.1| proteasome beta-subunit C5 [Mus musculus]
gi|74198429|dbj|BAE39698.1| unnamed protein product [Mus musculus]
gi|74205097|dbj|BAE21005.1| unnamed protein product [Mus musculus]
gi|148688516|gb|EDL20463.1| proteasome (prosome, macropain) subunit, beta type 1 [Mus musculus]
Length = 240
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 32 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 151
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 152 DPVGSYQRDSFKAGGSASAML 172
>gi|84370111|ref|NP_001033628.1| proteasome subunit beta type-1 precursor [Bos taurus]
gi|108860905|sp|Q2TBX6.1|PSB1_BOVIN RecName: Full=Proteasome subunit beta type-1; Flags: Precursor
gi|83638719|gb|AAI09495.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Bos taurus]
Length = 241
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|126311312|ref|XP_001381658.1| PREDICTED: proteasome subunit beta type-1-like [Monodelphis
domestica]
Length = 244
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 36 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 95
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 96 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 155
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 156 DPVGSYQRDSFKAGGSASAML 176
>gi|426235057|ref|XP_004011507.1| PREDICTED: proteasome subunit beta type-1 [Ovis aries]
Length = 241
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|403305890|ref|XP_003943482.1| PREDICTED: proteasome subunit beta type-1 [Saimiri boliviensis
boliviensis]
Length = 241
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|296199648|ref|XP_002747247.1| PREDICTED: proteasome subunit beta type-1-like [Callithrix jacchus]
Length = 241
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|197129773|gb|ACH46271.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
Query: 3 EAMLEH-----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG 57
EA ++H Y +GGTV+AIAG DF ++ASDTR S +I S + K ++L +T +G
Sbjct: 19 EAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIG 78
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+G D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+
Sbjct: 79 CTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 138
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
D GKG VYS+DPVG E+ ++ G+++ +
Sbjct: 139 DEEGKGAVYSFDPVGSYERDNFKAGGSASAML 170
>gi|431904620|gb|ELK10002.1| Proteasome subunit beta type-1 [Pteropus alecto]
Length = 241
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|37231712|gb|AAH58455.1| Proteasome (prosome, macropain) subunit, beta type 1 [Rattus
norvegicus]
gi|149047099|gb|EDL99819.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_a
[Rattus norvegicus]
Length = 240
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 32 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 151
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 152 DPVGSYQRDSFKAGGSASAML 172
>gi|1165123|emb|CAA56702.1| component C5 of proteasome [Mus musculus]
Length = 225
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 17 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 76
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 77 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 136
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 137 DPVGSYQRDSFKAGGSASAML 157
>gi|432114954|gb|ELK36597.1| Proteasome subunit beta type-1 [Myotis davidii]
Length = 240
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 32 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 151
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 152 DPVGSYQRDSFKAGGSASAML 172
>gi|350539311|ref|NP_001232140.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129774|gb|ACH46272.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129776|gb|ACH46274.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129778|gb|ACH46276.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129780|gb|ACH46278.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129781|gb|ACH46279.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129782|gb|ACH46280.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
gi|197129783|gb|ACH46281.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
Query: 3 EAMLEH-----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG 57
EA ++H Y +GGTV+AIAG DF ++ASDTR S +I S + K ++L +T +G
Sbjct: 19 EAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIG 78
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+G D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+
Sbjct: 79 CTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 138
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
D GKG VYS+DPVG E+ ++ G+++ +
Sbjct: 139 DEEGKGAVYSFDPVGSYERDNFKAGGSASAML 170
>gi|354486298|ref|XP_003505318.1| PREDICTED: proteasome subunit beta type-1-like [Cricetulus griseus]
Length = 240
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 32 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 151
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 152 DPVGSYQRDSFKAGGSASAML 172
>gi|348561415|ref|XP_003466508.1| PREDICTED: proteasome subunit beta type-1-like [Cavia porcellus]
Length = 241
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|291414594|ref|XP_002723544.1| PREDICTED: proteasome beta 1 subunit [Oryctolagus cuniculus]
Length = 241
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDRTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|197129784|gb|ACH46282.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
Query: 3 EAMLEH-----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG 57
EA ++H Y +GGTV+AIAG DF ++ASDTR S +I S + K ++L +T +G
Sbjct: 19 EAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIG 78
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+G D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+
Sbjct: 79 CTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 138
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
D GKG VYS+DPVG E+ ++ G+++ +
Sbjct: 139 DEEGKGAVYSFDPVGSYERDNFKAGGSASAML 170
>gi|73974057|ref|XP_532275.2| PREDICTED: proteasome subunit beta type-1 [Canis lupus familiaris]
Length = 241
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|410912074|ref|XP_003969515.1| PREDICTED: proteasome subunit beta type-1-B-like [Takifugu
rubripes]
Length = 237
Score = 112 bits (280), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYAFNGGTVLAVAGDDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + +S A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKTMSSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|229367266|gb|ACQ58613.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|348534148|ref|XP_003454565.1| PREDICTED: proteasome subunit beta type-1-A-like [Oreochromis
niloticus]
Length = 237
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|449278062|gb|EMC86029.1| Proteasome subunit beta type-1 [Columba livia]
Length = 237
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 85/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+L+ASDTR S I + K ++L +T +G SG D L +
Sbjct: 29 YTFNGGTVLAIAGEDFSLVASDTRLSEGYAIHCRDSPKCYKLTERTVIGCSGFHGDCLTL 88
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 89 TKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 148
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 149 DPVGSYQRDSFKAAGSASAML 169
>gi|443895548|dbj|GAC72894.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7 [Pseudozyma
antarctica T-34]
Length = 292
Score = 112 bits (279), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG++ A+ G DF +IASDTR S+ I + + K+FRL ++ + +G AD+ +
Sbjct: 32 YDSNGGSIAAVCGSDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGFAADAEAL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
VSR++ + A G+ + L A M+S +LY +R FPYYV +L G+D GKG VYS+
Sbjct: 92 VSRIRQRLEMYRHAHGRSMPLHSIARMISTMLYGKRFFPYYVYNILGGLDEQGKGAVYSF 151
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVKVP 184
DPVG E+ R G + L+ P+ + + I + TP KVP
Sbjct: 152 DPVGSYEREFCRAAGAAQS--------LIQPF-----FDNQIMFRNQSDTPERKVP 194
>gi|229367074|gb|ACQ58517.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRRFFPYYVYNIIGGLDEHGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|225703310|gb|ACO07501.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 112 bits (279), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 87/147 (59%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG+
Sbjct: 23 EHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGSH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGPYQRDTYKAGGSASAML 169
>gi|327262119|ref|XP_003215873.1| PREDICTED: proteasome subunit beta type-1-like [Anolis
carolinensis]
Length = 239
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 86/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AIAG DF+++ASDTR S + + S + K ++L + T +G SG D L +
Sbjct: 31 YTFNGGTILAIAGEDFSIVASDTRLSEDYAVHSRDSPKCYKLTDTTVIGCSGFHGDCLTL 90
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + +S A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 91 TKIIEARLKMYKHSNNKIMSAGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 150
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ ++ G+++ +
Sbjct: 151 DPVGSYQRDTFKAGGSASAML 171
>gi|301779700|ref|XP_002925260.1| PREDICTED: proteasome subunit beta type-1-like [Ailuropoda
melanoleuca]
gi|281351745|gb|EFB27329.1| hypothetical protein PANDA_014727 [Ailuropoda melanoleuca]
Length = 241
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S ++ + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGYSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|326915585|ref|XP_003204095.1| PREDICTED: proteasome subunit beta type-1-like [Meleagris
gallopavo]
Length = 237
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF ++ASDTR S I S + K ++L T +G SG D L +
Sbjct: 29 YTFNGGTVLAIAGEDFCIVASDTRLSEGYAIHSRDSPKCYKLTEHTVIGCSGFHGDCLTL 88
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 89 TKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 148
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 149 DPVGSYQRDSFKAGGSASAML 169
>gi|149744029|ref|XP_001499422.1| PREDICTED: proteasome subunit beta type-1-like [Equus caballus]
Length = 241
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 153 DPVGSYQRDSFKAGGSASAML 173
>gi|395839143|ref|XP_003792460.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1
[Otolemur garnettii]
Length = 343
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 88/141 (62%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 135 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 194
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+
Sbjct: 195 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSF 254
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 255 DPVGSYQRDSFKAGGSASAML 275
>gi|388851426|emb|CCF54828.1| probable PRE7-20S proteasome subunit(beta6) [Ustilago hordei]
Length = 291
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG++ A+ G DF +IASDTR S+ I + + K+FRL ++ + +G AD+ +
Sbjct: 33 YDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGFAADAEAL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
VSR++ + A G+ + L A M+S +LY +R FPYYV +L G+D GKG VYS+
Sbjct: 93 VSRVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEGKGAVYSF 152
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVKVP 184
DPVG E+ R G + L+ P+ + + I + TP KVP
Sbjct: 153 DPVGSYEREFCRAAGAAQS--------LIQPF-----FDNQIMFKNQTSTPEHKVP 195
>gi|213401303|ref|XP_002171424.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
gi|211999471|gb|EEB05131.1| proteasome component C5 [Schizosaccharomyces japonicus yFS275]
Length = 193
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 93/151 (61%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISG 60
M+++ + YVQ+GGT++ IAG DF++IA DTR+ + I + ++ + ++ +G +G
Sbjct: 1 MSQSRFDPYVQNGGTIVGIAGEDFSIIAGDTRNVNGYNINTRFSPRVHEVGDKLILGATG 60
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD+L +V R++ I+ + + +S + M+ +LY +R FPYYV L+ G+D
Sbjct: 61 FEADALTLVKRIRQRIDLYHDNHKRIMSPSSCSRMVQTMLYGKRFFPYYVYTLVAGLDEK 120
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFMLA 151
G G +YS+DPVG E+ R G++A FML+
Sbjct: 121 GVGALYSFDPVGSYEREWCRAAGSAANFMLS 151
>gi|225705074|gb|ACO08383.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|225704042|gb|ACO07867.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|225703280|gb|ACO07486.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 237
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTEIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|51468069|ref|NP_001003889.1| proteasome subunit beta type-1 [Danio rerio]
gi|49619079|gb|AAT68124.1| proteasome beta-subunit C5 [Danio rerio]
gi|55715844|gb|AAH85580.1| Proteasome (prosome, macropain) subunit, beta type, 1 [Danio rerio]
gi|182891728|gb|AAI65077.1| Psmb1 protein [Danio rerio]
Length = 237
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 87/147 (59%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+D G+
Sbjct: 83 GDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|209734840|gb|ACI68289.1| Proteasome subunit beta type-1-A [Salmo salar]
Length = 237
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYSFNGGTVLAVAGEDFAVVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKCMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|226489268|emb|CAX75778.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
M Y +GGTVM I+G DFALIASDTR + I+S N ++F+L +G +G
Sbjct: 1 MFNLYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVLGCAGFHG 60
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D L + L+ ++ G+ +S A +LS+ LY RR FP+YV +LVG+DG +G
Sbjct: 61 DVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD-RG 119
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFM 149
+YSYDPVG E YR G+SA +
Sbjct: 120 VLYSYDPVGSYEAEGYRASGSSAAIL 145
>gi|56758256|gb|AAW27268.1| SJCHGC09410 protein [Schistosoma japonicum]
gi|226489270|emb|CAX75779.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489272|emb|CAX75780.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
gi|226489274|emb|CAX75781.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
M Y +GGTVM I+G DFALIASDTR + I+S N ++F+L +G +G
Sbjct: 1 MFNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVLGCAGFHG 60
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D L + L+ ++ G+ +S A +LS+ LY RR FP+YV +LVG+DG +G
Sbjct: 61 DVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD-RG 119
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFM 149
+YSYDPVG E YR G+SA +
Sbjct: 120 VLYSYDPVGSYEAEGYRASGSSAAIL 145
>gi|328766922|gb|EGF76974.1| hypothetical protein BATDEDRAFT_92136 [Batrachochytrium
dendrobatidis JAM81]
Length = 231
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 83/147 (56%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT +AIAG DF +IA DTR S +I + K+ + N T + G
Sbjct: 17 EHAFSPYTDNGGTTLAIAGDDFCVIAGDTRQSEGYSINTRYAPKVHEMRNGTVLATGGMF 76
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
ADS ++ R+Q + + +S P A+MLS +LY +R FPY+ + G+D GK
Sbjct: 77 ADSQTLMKRIQQRLEWYQFQHDKNMSAPAMAQMLSTILYYKRFFPYFSWCSVGGLDEHGK 136
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VY+YDPVG+ E+V++ G++ K +
Sbjct: 137 GCVYTYDPVGNYERVSWDCGGSAGKLI 163
>gi|225705308|gb|ACO08500.1| Proteasome subunit beta type 1-A [Oncorhynchus mykiss]
Length = 236
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 85/147 (57%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L N T +G SG
Sbjct: 22 EHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTNTTVIGCSGFH 81
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A LS +LY RR FPYYV ++ G+D GK
Sbjct: 82 GDCLTLTKIIDARLKMYKHSNNKSMTSGAIAATLSTILYGRRFFPYYVYNIIGGLDEEGK 141
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 142 GAVYSFDPVGSYQRGTYKAGGSASAML 168
>gi|401402253|ref|XP_003881203.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
gi|325115615|emb|CBZ51170.1| hypothetical protein NCLIV_042370 [Neospora caninum Liverpool]
Length = 246
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 83/156 (53%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E YV +GGTV+ +AG DFA+ DTR S+ +I S Q KI +L ++ + SG
Sbjct: 33 ERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRFQSKITKLTDKVVLATSGMQ 92
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + + LQ I + P SL A++LS +LY RR FP+Y +L GID GK
Sbjct: 93 ADKTTLHNLLQIRIEQYTHQHRHPPSLNAIAQLLSTMLYSRRFFPFYTFNVLCGIDENGK 152
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G VY YD +G E Y GT A ++ + +S
Sbjct: 153 GAVYGYDAIGSFEAARYNCAGTGAHLIMPVLDNQIS 188
>gi|67539228|ref|XP_663388.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|40743687|gb|EAA62877.1| hypothetical protein AN5784.2 [Aspergillus nidulans FGSC A4]
gi|259484727|tpe|CBF81196.1| TPA: putative proteasome core component, beta 6 subunit (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 261
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+V+ I G DFA++A DTRS+S I S K+F++ + G + G
Sbjct: 34 YTDNGGSVLGITGKDFAVLAGDTRSTSGYNINSRYVPKVFKIGGEDETGKGAHILLSVVG 93
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD L + RL A + G+P+S+ A+ LS +LY++R FPYYVQ +L G+D
Sbjct: 94 FAADGLALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVQAILAGLDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +Y YDPVG E+ R G ++ ++
Sbjct: 154 GKGALYGYDPVGSYEREQCRSAGAASSLIM 183
>gi|392592203|gb|EIW81530.1| 20S proteasome subunit [Coniophora puteana RWD-64-598 SS2]
Length = 257
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 83/144 (57%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
T+ Y ++GGT++AIAG DF++IA DTR S I + K+FRL ++ + ++G
Sbjct: 15 TQHQFNPYTENGGTILAIAGADFSVIAGDTRQSEGYNIQTRYAPKVFRLTDRAVLAVNGF 74
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD V +++ + A G+ + L A ++ +LY RR FPYYV +L GI+ G
Sbjct: 75 AADGNMFVKKVKQRLEWYRHAHGKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIEEDG 134
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTS 145
G VYS+DPVG E+ A R G +
Sbjct: 135 TGAVYSFDPVGSYEREACRAAGAA 158
>gi|72537676|gb|AAZ73764.1| 20S proteasome beta subunit [Cirrhinus molitorella]
Length = 237
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHKFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D G+
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|225716016|gb|ACO13854.1| Proteasome subunit beta type-1-A [Esox lucius]
Length = 237
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 86/147 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYSFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D G+
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGR 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|226471340|emb|CAX70751.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 212
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
M Y +GGTVM I+G DFALIASDTR + I+S N ++F+L +G +G
Sbjct: 1 MFNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGRGNVLGYAGFHG 60
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D L + L+ ++ G+ +S A +LS+ LY RR FP+YV +LVG+DG +G
Sbjct: 61 DVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD-RG 119
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFM 149
+YSYDPVG E YR G+SA +
Sbjct: 120 VLYSYDPVGSYEAEGYRASGSSAAIL 145
>gi|302810458|ref|XP_002986920.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
gi|300145325|gb|EFJ12002.1| hypothetical protein SELMODRAFT_124882 [Selaginella moellendorffii]
Length = 226
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 12/171 (7%)
Query: 1 MTEAMLEH-----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA 55
M + EH Y +GGT +AIAG D+ ++A+DTR S +I++ K+F+L +
Sbjct: 1 MARGVKEHATWSPYENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAV 60
Query: 56 VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV 115
+ SG AD + L+A G+P+S PG A++LS LY +R FPYY +L
Sbjct: 61 MASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 120
Query: 116 GIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM-------LASMSYLLSP 159
G+D GKG VY+YD VG E+ Y G+ A+ + L S S LL P
Sbjct: 121 GLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYP 171
>gi|343426757|emb|CBQ70285.1| probable PRE7-20S proteasome subunit(beta6) [Sporisorium reilianum
SRZ2]
Length = 291
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 82/137 (59%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG++ A+ G DF +IASDTR S+ I + + K+FRL ++ + +G AD+ +
Sbjct: 35 YDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGFAADAEAL 94
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
VS +Q + A G+ + L A MLS +LY +R FPYYV +L G+D GKG VYS+
Sbjct: 95 VSHVQQRLEMYRHAHGRSMPLHSIARMLSTILYGKRFFPYYVYNILGGLDEEGKGAVYSF 154
Query: 129 DPVGHCEKVAYRLHGTS 145
DPVG E+ R G +
Sbjct: 155 DPVGSYEREFCRAAGAA 171
>gi|226471338|emb|CAX70750.1| proteasome (prosome, macropain) subunit, beta type, 1 [Schistosoma
japonicum]
Length = 178
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
M Y +GGTVM I+G DFALIASDTR + I+S N ++F+L +G +G
Sbjct: 1 MFNPYASNGGTVMGISGNDFALIASDTRLCDGDFVILSRNCPRLFKLGCGNVLGCAGFHG 60
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D L + L+ ++ G+ +S A +LS+ LY RR FP+YV +LVG+DG +G
Sbjct: 61 DVLTLTKLLENKVKTYRYDHGKDISTKALAGLLSVSLYNRRFFPFYVSNILVGLDGD-RG 119
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFM 149
+YSYDPVG E YR G+SA +
Sbjct: 120 VLYSYDPVGSYEAEGYRASGSSAAIL 145
>gi|367020378|ref|XP_003659474.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
gi|347006741|gb|AEO54229.1| hypothetical protein MYCTH_2296573 [Myceliophthora thermophila ATCC
42464]
Length = 265
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 85/156 (54%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E E Y +GG+ +AIAG DF ++A DTR SS +I S K+F++ TA
Sbjct: 32 EHRFEPYADNGGSTLAIAGADFTVMAGDTRLSSGYSINSRQHPKLFKIGGTTADQKDATI 91
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL A G+P+S+ A+ LS +LY++R FPYY +L
Sbjct: 92 VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYTHAIL 151
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG VYSYDPVG E+ R G +A ++
Sbjct: 152 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAASLIM 187
>gi|388581296|gb|EIM21605.1| 20S proteasome subunit [Wallemia sebi CBS 633.66]
Length = 255
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y Q+GGTV+AIAG DF ++A DTR S +I S + K++RL + + +G AD ++
Sbjct: 6 YTQNGGTVLAIAGKDFCVVAGDTRQSEGFSIQSRYETKVWRLNEKATIAANGFAADCKQL 65
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V R++ + A + + L A M+ +LY +R FP+Y V++ GID G G VY +
Sbjct: 66 VKRVKWRLETYKYAHNKEMPLKSIARMVQTMLYGKRFFPFYSYVIIGGIDDEGTGAVYGF 125
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG E+ R G + +
Sbjct: 126 DPVGSYERETCRAAGAAQSLL 146
>gi|260799786|ref|XP_002594865.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
gi|229280102|gb|EEN50876.1| hypothetical protein BRAFLDRAFT_124448 [Branchiostoma floridae]
Length = 235
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 81/141 (57%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG D+A++A D R S +I+S + K ++L + T +G G D L +
Sbjct: 27 YSWNGGTVLAIAGEDYAVLACDARLSEYFSILSRDSPKRYKLTDMTVLGCCGFHGDVLTL 86
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + +S A MLS +LY RR FPYY +L G+D GKG VYS+
Sbjct: 87 TKMLDARLKNYKHEHNKTMSCKSIAAMLSTVLYYRRFFPYYTYNILAGLDEEGKGCVYSF 146
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DP+G E+ YR G+++ +
Sbjct: 147 DPIGSYEREVYRAGGSASALL 167
>gi|397610458|gb|EJK60845.1| hypothetical protein THAOC_18741 [Thalassiosira oceanica]
Length = 283
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT +AI+GPD+A++A+DTR SS I+S N K+ L + +G +G
Sbjct: 70 ERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCK 129
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D ++ S L ++ A +P++ P A+ML LY +R FPYY +L GID GK
Sbjct: 130 TDVDQLRSVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGK 189
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G VYSYD +G E+ + G+ F++ M ++S +++ D + + EE+ +VK
Sbjct: 190 GAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVIS-HKNRLD--ERRDLPAEEVVEIVK 246
>gi|210075667|ref|XP_502489.2| YALI0D06523p [Yarrowia lipolytica]
gi|199425772|emb|CAG80677.2| YALI0D06523p [Yarrowia lipolytica CLIB122]
Length = 248
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 96/180 (53%), Gaps = 2/180 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFAL+A DTR+++ +I S Q K+F + + V +G
Sbjct: 34 EHRFNPYGDNGGTVLGIAGDDFALLAGDTRNTTGYSINSRYQPKVFDVGDNILVTANGFS 93
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD ++ ++ + +PL + A + +LY +R FPYYV ++ G+D GK
Sbjct: 94 ADGDALIENIKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLDEEGK 153
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G VYSYDPVG E+ R G++A ++ + ++ + + +T LEE VVK
Sbjct: 154 GAVYSYDPVGSYEREFCRAGGSAASLVMPFLDSQVNKKNQQVENPPPLT--LEEALKVVK 211
>gi|302814429|ref|XP_002988898.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
gi|300143235|gb|EFJ09927.1| hypothetical protein SELMODRAFT_235631 [Selaginella moellendorffii]
Length = 226
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 91/171 (53%), Gaps = 12/171 (7%)
Query: 1 MTEAMLEH-----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA 55
M EH Y +GGT +AIAG D+ ++A+DTR S +I++ K+F+L +
Sbjct: 1 MARGFKEHATWSPYENNGGTCVAIAGLDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAV 60
Query: 56 VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV 115
+ SG AD + L+A G+P+S PG A++LS LY +R FPYY +L
Sbjct: 61 MASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPGMAQLLSNTLYYKRFFPYYSFNVLG 120
Query: 116 GIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM-------LASMSYLLSP 159
G+D GKG VY+YD VG E+ Y G+ A+ + L S S LL P
Sbjct: 121 GLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIMPILDNQLKSASPLLYP 171
>gi|170089877|ref|XP_001876161.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
gi|164649421|gb|EDR13663.1| 20S proteasome subunit [Laccaria bicolor S238N-H82]
Length = 249
Score = 108 bits (271), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 1 MTEAMLEH----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAV 56
MT+ +H Y ++GGT++AIAG DF++IA DTR S +I + K+FRL ++ +
Sbjct: 1 MTQRPQQHSFNPYTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVL 60
Query: 57 GISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG 116
++G AD V +++ + A + + + A ++ +LY RR FPYYV +L G
Sbjct: 61 AVNGFAADGNMFVKKVRQRLEWYRHAHSKDMPIRAIARLIQTMLYARRFFPYYVYNILGG 120
Query: 117 IDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
I+ G G VYS+DPVG E+ A R G + M
Sbjct: 121 IEEDGTGAVYSFDPVGSYEREACRAAGAAQSLM 153
>gi|164657003|ref|XP_001729628.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
gi|159103521|gb|EDP42414.1| hypothetical protein MGL_3172 [Malassezia globosa CBS 7966]
Length = 257
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 78/129 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG++MAI G D+ +IA DTR S I + + K+FRL ++ + +G AD+ +
Sbjct: 10 YTSNGGSIMAIHGDDYCVIAGDTRQSEGYNIQTRYKPKVFRLTDKATLATNGFAADAEAL 69
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V+R++ + G+ + L A MLS +LY +R FPYYV +L GID G+G VY Y
Sbjct: 70 VARVKTRLEMYQHTHGRSMPLHAIARMLSTILYSKRFFPYYVYNILGGIDEEGRGAVYGY 129
Query: 129 DPVGHCEKV 137
DPVG E++
Sbjct: 130 DPVGSYERI 138
>gi|154308528|ref|XP_001553600.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347826621|emb|CCD42318.1| similar to proteasome subunit beta type-1-A [Botryotinia
fuckeliana]
Length = 264
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ +AI+G DF ++A DTRS+S I + Q K+F++ TA + + G
Sbjct: 37 YTDNGGSTLAISGSDFTIVAGDTRSTSGYNINTRYQPKVFKIGGTTAAQDDATLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ L+ +LY +R FPYYV +L G+D
Sbjct: 97 FAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTAILGGLDEE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG VYSYDPVG E+ R G +A ++
Sbjct: 157 GKGAVYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|225707182|gb|ACO09437.1| Proteasome subunit beta type 1-A [Osmerus mordax]
Length = 237
Score = 108 bits (270), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 85/147 (57%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFAL+ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYSFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D + + A + + + ++ A MLS +LY RR FPYYV ++ G+D G+
Sbjct: 83 GDCPTLTKIIDARLKMYKHSNNKTMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEQGR 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VYS+DPVG ++ Y+ G+++ +
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSASAML 169
>gi|156036420|ref|XP_001586321.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154698304|gb|EDN98042.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 264
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ +AI+G DF ++A DTRS+S I + Q K+F++ TA + + G
Sbjct: 37 YTDNGGSTLAISGSDFTIVAGDTRSTSGYNINTRYQPKVFKIGGTTASQDDATLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ L+ +LY +R FPYYV +L G+D
Sbjct: 97 FAADGEALKERLDAIVKMYRYQHGKPMSVKACAQRLATILYSKRFFPYYVTAILGGLDEE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG VYSYDPVG E+ R G +A ++
Sbjct: 157 GKGAVYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|229366584|gb|ACQ58272.1| Proteasome subunit beta type-1-A [Anoplopoma fimbria]
Length = 237
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 23 EHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 82
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY R FPYYV ++ G+D GK
Sbjct: 83 GDCLTLTKIIDARLKMYKHSNNKTMTSNAIAAMLSTILYGRGFFPYYVYNIIGGLDEHGK 142
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSA 146
G VYS+DPVG ++ Y+ G+++
Sbjct: 143 GAVYSFDPVGSYQRDTYKAGGSAS 166
>gi|221505718|gb|EEE31363.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 361
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 83/156 (53%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E YV +GGTV+ +AG DFA+ DTR S+ +I S Q KI +L ++ + SG
Sbjct: 148 ERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGME 207
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + + L+ I + P SL A++LS +LY RR FP+Y +L GID GK
Sbjct: 208 ADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGK 267
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G VY YD +G E Y GT A ++ + +S
Sbjct: 268 GAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQIS 303
>gi|256075409|ref|XP_002574012.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
gi|353229361|emb|CCD75532.1| proteasome subunit beta 1 (T01 family) [Schistosoma mansoni]
Length = 212
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 2/146 (1%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
M Y +GGTVM IAG DF+LIASDTR + I+S N ++F+L +G +G
Sbjct: 1 MFNPYSSNGGTVMGIAGNDFSLIASDTRLCDGDFVILSRNSPRLFKLGPGNILGCAGFHG 60
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D L + L+ ++ G+ +S A +LS+ LY RR FP+YV +LVG+D G+G
Sbjct: 61 DVLTLTKLLENKVKTFRYDHGKNISTKALAGLLSVTLYNRRFFPFYVSNVLVGLD-EGRG 119
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFM 149
+YSYDPVG E YR G+S+ +
Sbjct: 120 VLYSYDPVGSYESEGYRASGSSSAIL 145
>gi|237838257|ref|XP_002368426.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
gi|211966090|gb|EEB01286.1| proteasome subunit beta type 1, putative [Toxoplasma gondii ME49]
Length = 359
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 83/156 (53%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E YV +GGTV+ +AG DFA+ DTR S+ +I S Q KI +L ++ + SG
Sbjct: 146 ERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGME 205
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + + L+ I + P SL A++LS +LY RR FP+Y +L GID GK
Sbjct: 206 ADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGK 265
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G VY YD +G E Y GT A ++ + +S
Sbjct: 266 GAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQIS 301
>gi|367043468|ref|XP_003652114.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
gi|346999376|gb|AEO65778.1| hypothetical protein THITE_2113189 [Thielavia terrestris NRRL 8126]
Length = 265
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E + Y +GG+ +AIAG DF ++A DTR +S +I S K+F++ TA
Sbjct: 32 EHRFDPYADNGGSTLAIAGADFTIMAGDTRLTSGYSINSRFHPKLFKIGGSTADQKDATL 91
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL A G+P+S+ A+ LS +LY++R FPYYV +L
Sbjct: 92 VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVHAIL 151
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG VYSYDPVG E+ R G +A ++
Sbjct: 152 GGLDEDGKGAVYSYDPVGSYEREQCRAGGAAASLIM 187
>gi|221484304|gb|EEE22600.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
Length = 359
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 83/156 (53%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E YV +GGTV+ +AG DFA+ DTR S+ +I S Q KI +L ++ + SG
Sbjct: 146 ERRFSPYVNNGGTVVCVAGEDFAVAVGDTRLSTGFSIYSRRQSKITKLTDKVVLATSGME 205
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + + L+ I + P SL A++LS +LY RR FP+Y +L GID GK
Sbjct: 206 ADKTTLHNLLKIRIEQYTHQHRHPPSLNAIAQLLSTVLYSRRFFPFYTFNVLCGIDENGK 265
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G VY YD +G E Y GT A ++ + +S
Sbjct: 266 GAVYGYDAIGSFEPSRYNCAGTGAHLIMPVLDNQIS 301
>gi|197129775|gb|ACH46273.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 238
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 89/152 (58%), Gaps = 5/152 (3%)
Query: 3 EAMLEH-----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG 57
EA ++H Y +GGTV+AIAG DF ++ASDTR S +I S + K ++L +T +G
Sbjct: 19 EAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIG 78
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+G D L + ++A + + ++ A MLS +LY RR FPYYV ++ G+
Sbjct: 79 CTGFHGDCLTLTKIIEAGGEMYKHSNFKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 138
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
D GKG VYS+DPVG E+ ++ G+++ +
Sbjct: 139 DEEGKGAVYSFDPVGSYERDNFKAGGSASAML 170
>gi|321260412|ref|XP_003194926.1| 20S proteasome beta-type subunit; Pre7p [Cryptococcus gattii WM276]
gi|317461398|gb|ADV23139.1| 20S proteasome beta-type subunit, putative; Pre7p [Cryptococcus
gattii WM276]
Length = 272
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 82/141 (58%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DF++IA DTR S +I + K+++L ++ + +G AD
Sbjct: 27 YSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGFAADGNNF 86
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V R++ + A +P+SL A M+ +LY +R FPYYV +L GI+ G G VYS+
Sbjct: 87 VKRVKQRLEWYEHAHNKPMSLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSF 146
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG E+ A R G + +
Sbjct: 147 DPVGSYEREACRAAGAAQSLI 167
>gi|119567805|gb|EAW47420.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_a [Homo sapiens]
Length = 219
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 84/135 (62%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
T++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L + ++A
Sbjct: 17 TILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 76
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHC 134
+ + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+DPVG
Sbjct: 77 RLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSY 136
Query: 135 EKVAYRLHGTSAKFM 149
++ +++ G+++ +
Sbjct: 137 QRDSFKAGGSASAML 151
>gi|353238864|emb|CCA70796.1| probable PRE7-20S proteasome subunit(beta6) [Piriformospora indica
DSM 11827]
Length = 250
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 80/143 (55%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y ++GGT++AIAG DF +IA DTR S I + K+FRL ++ + ++G
Sbjct: 5 ERRFNPYTENGGTILAIAGQDFTVIAGDTRQSEGYNIQTRYAPKVFRLTDKAVLAVNGFA 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD V ++Q + A + + L A ++ +LY +R FPYYV +L GI+ G
Sbjct: 65 ADGNMFVQKVQQRLEWYQHAHNKEMPLRAIARLIQTMLYAKRFFPYYVYNILGGIEDDGS 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTS 145
G VYS+DPVG E+ A R G +
Sbjct: 125 GAVYSFDPVGSYEREACRAAGAA 147
>gi|302774737|ref|XP_002970785.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
gi|302818938|ref|XP_002991141.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300141072|gb|EFJ07787.1| hypothetical protein SELMODRAFT_132999 [Selaginella moellendorffii]
gi|300161496|gb|EFJ28111.1| hypothetical protein SELMODRAFT_94273 [Selaginella moellendorffii]
Length = 226
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 85/155 (54%), Gaps = 5/155 (3%)
Query: 1 MTEAMLEH-----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA 55
M EH Y +GGT +AIAG D+ ++A+DTR S +I++ K+F+L +
Sbjct: 1 MAHGFKEHATWSPYENNGGTCVAIAGSDYCIVAADTRLSLGYSILTRGHSKLFKLSDTAV 60
Query: 56 VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV 115
+ SG AD + L+A G+P+S P A++LS LY +R FPYY +L
Sbjct: 61 MASSGFQADVRTLQKNLEARQKGYYHQHGKPMSCPAMAQLLSNTLYYKRFFPYYSFNVLG 120
Query: 116 GIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG VY+YD VG E+ Y G+ A+ ++
Sbjct: 121 GLDTEGKGCVYTYDAVGSYERTGYSTQGSGAELIM 155
>gi|224067752|ref|XP_002302536.1| predicted protein [Populus trichocarpa]
gi|118484887|gb|ABK94310.1| unknown [Populus trichocarpa]
gi|222844262|gb|EEE81809.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 85/148 (57%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A E Y +GGT +AIAG D+ ++A+DTR S+ I++ + KI++L ++ + SG
Sbjct: 5 QARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKIYKLADKCLMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L A+ + +S P A +LS LY +R FPYY +LVG D GK
Sbjct: 65 ADVRALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G VY+YD VG EKV Y G+ AK ++
Sbjct: 125 GCVYTYDAVGSYEKVGYSAQGSGAKLIM 152
>gi|71018283|ref|XP_759372.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
gi|46099097|gb|EAK84330.1| hypothetical protein UM03225.1 [Ustilago maydis 521]
Length = 356
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 82/137 (59%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG++ A+ G DF +IASDTR S+ I + + K+FRL ++ + +G AD+ +
Sbjct: 100 YDSNGGSIAAVCGTDFCVIASDTRQSTGYNIQTRYKPKVFRLNDKATLATNGFAADAEAL 159
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
VS ++ + A G+ + L A M+S +LY +R FPYYV +L G+D GKG VYS+
Sbjct: 160 VSHVRQRLEMYRHAHGRSMPLHSIARMISTILYGKRFFPYYVYNILGGLDEEGKGAVYSF 219
Query: 129 DPVGHCEKVAYRLHGTS 145
DPVG E+ R G +
Sbjct: 220 DPVGSYEREFCRAAGAA 236
>gi|440796014|gb|ELR17123.1| proteasome subunit protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 236
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 80/141 (56%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +A+ G DF ++A+DTR S+ +I S K+ +L ++ + +G AD L +
Sbjct: 27 YTDNGGTTLALHGKDFCVVAADTRLSTGYSIHSREARKVLKLTDKCVIATAGMQADQLAL 86
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
LQ + +P+S P A+ML+ +LY +R FP+Y +L G+D G G VYSY
Sbjct: 87 HKLLQTRLQWYEHQHRKPMSTPAIAQMLATILYSKRFFPFYTFNVLGGVDDNGVGCVYSY 146
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
D VG E+V Y GT + +
Sbjct: 147 DAVGSFERVKYSSSGTGNQLV 167
>gi|350296725|gb|EGZ77702.1| proteasome component C5 [Neurospora tetrasperma FGSC 2509]
Length = 265
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VG 57
+ Y +GG+ +AIAG DF ++A DTR +S +I S K+F++ TA +
Sbjct: 35 FDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQKDATIVLS 94
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+ G AD + RL A G+P+S+ A+ LS +LY++R FPYYV +L G+
Sbjct: 95 VVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGGL 154
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
D GKG VYSYDPVG E+ R G +A ++ + ++ ++++++ + AL+E
Sbjct: 155 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVN-FKNQYEPGSGVGHALQE 212
>gi|426195798|gb|EKV45727.1| 20S proteasome subunit [Agaricus bisporus var. bisporus H97]
Length = 256
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++AIAG DF++IA DTR S +I + K+FRL ++ + ++G AD
Sbjct: 20 YTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMF 79
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
V +++ E R A AK P+ A ++ +LY RR FPYYV +L GI+ G G VY
Sbjct: 80 VKKVRQRLEWYRHAHAKDMPIR--AIARLIQTMLYSRRFFPYYVYNILGGIEEDGTGAVY 137
Query: 127 SYDPVGHCEKVAYRLHGTS 145
S+DPVG E+ A R G +
Sbjct: 138 SFDPVGSYEREACRAAGAA 156
>gi|328868192|gb|EGG16572.1| proteasome subunit beta type 1 [Dictyostelium fasciculatum]
Length = 236
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 85/145 (58%), Gaps = 1/145 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMAD 64
E YV +GGTV+A+AG ++ ++A DTR S G I + + K+F+L ++ + SG AD
Sbjct: 23 FEPYVDNGGTVLAVAGSNYCIVAGDTRMSDGGYGIQTRHYTKVFKLTDKCVIATSGMQAD 82
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
++ + RL ++ + G+ +S P A+ LS LY +R FP+Y L+ G+D G G
Sbjct: 83 TIALRKRLDTQLRQYERDHGKSMSTPAIAQFLSNTLYHKRFFPFYTFNLVAGVDEDGIGC 142
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFM 149
V++YD VG E+V + G+ + +
Sbjct: 143 VWTYDAVGSHERVRFSSQGSGNQLI 167
>gi|409078890|gb|EKM79252.1| hypothetical protein AGABI1DRAFT_113835 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 256
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 83/139 (59%), Gaps = 4/139 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++AIAG DF++IA DTR S +I + K+FRL ++ + ++G AD
Sbjct: 20 YTENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMF 79
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
V +++ E R A AK P+ A ++ +LY RR FPYYV +L GI+ G G VY
Sbjct: 80 VKKVRQRLEWYRHAHAKDMPIR--AIARLIQTMLYSRRFFPYYVYNILGGIEEDGTGAVY 137
Query: 127 SYDPVGHCEKVAYRLHGTS 145
S+DPVG E+ A R G +
Sbjct: 138 SFDPVGSYEREACRAAGAA 156
>gi|164422783|ref|XP_963776.2| proteasome component C5 [Neurospora crassa OR74A]
gi|157069819|gb|EAA34540.2| proteasome component C5 [Neurospora crassa OR74A]
Length = 265
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VG 57
+ Y +GG+ +AIAG DF ++A DTR +S +I S K+F++ TA +
Sbjct: 35 FDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQKDATIVLS 94
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+ G AD + RL A G+P+S+ A+ LS +LY++R FPYYV +L G+
Sbjct: 95 VVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGGL 154
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
D GKG VYSYDPVG E+ R G +A ++ + ++ ++++++ + AL+E
Sbjct: 155 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVN-FKNQYEPGSGVGHALQE 212
>gi|195998844|ref|XP_002109290.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
gi|190587414|gb|EDV27456.1| hypothetical protein TRIADDRAFT_20878 [Trichoplax adhaerens]
Length = 235
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 83/148 (56%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
T+ + Y +GGT++ +AG +FA++A DTR S I S + KI++L +T +G G
Sbjct: 20 TQHRFDPYTLNGGTIVGVAGDNFAILAGDTRLSEGFMIHSRDTSKIYKLTEKTFLGTCGF 79
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
D L + L A + + +S ++MLS +LY RR FPYY +L GID G
Sbjct: 80 QGDVLTLTRLLNARLTMYEFEHRKKMSSTAISQMLSTVLYYRRFFPYYTFNILAGIDTDG 139
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
KG +YSYD VG+ EK Y GT++ +
Sbjct: 140 KGCIYSYDAVGNYEKHTYHASGTASSML 167
>gi|428182497|gb|EKX51358.1| 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]
Length = 230
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 84/142 (59%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E+ Y +GGT +A+AG DF +IA+D+R S +I+S N K+ +L +T + SG
Sbjct: 16 ESRFSPYQNNGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLTTKTCIASSGCN 75
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + + L+ +I G+ +S P A+ML+ LY RR FPYY ++ G+D G+
Sbjct: 76 ADMVTLQKYLKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFNIVGGLDQNGE 135
Query: 123 GGVYSYDPVGHCEKVAYRLHGT 144
G V+SYD +G E++ Y + G+
Sbjct: 136 GCVFSYDAIGCFERLKYTVSGS 157
>gi|361131660|gb|EHL03312.1| putative proteasome component C5 [Glarea lozoyensis 74030]
Length = 263
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ +AI+G DF +IA DTRS+S I + K+F++ T+ + + G
Sbjct: 36 YTDNGGSTLAISGNDFTIIAGDTRSTSGYNINTRYSPKVFKIGGTTSSQDDATLVLSVVG 95
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 96 FAADGAALKERLDAIVKMYRYQHGKPMSVKACAQRLSTILYGKRFFPYYVTAILGGLDEE 155
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG VYSYDPVG E+ R G +A ++
Sbjct: 156 GKGAVYSYDPVGSYEREQCRAAGAAASLIM 185
>gi|159124092|gb|EDP49210.1| proteasome component Prs3, putative [Aspergillus fumigatus A1163]
Length = 261
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 12/161 (7%)
Query: 2 TEAMLEH----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG 57
+ A+ EH Y +GG+ + I G DFA++A DTRS + I S K+F++ G
Sbjct: 23 SAAVREHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETG 82
Query: 58 --------ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY 109
+ G AD + RL A + G+P+S+ A+ LS +LY++R FPYY
Sbjct: 83 EGAHILLSVVGFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYY 142
Query: 110 VQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
V +L G+D GKG +YSYDPVG E+ R G++A ++
Sbjct: 143 VHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIM 183
>gi|378725413|gb|EHY51872.1| 20S proteasome subunit beta 6 [Exophiala dermatitidis NIH/UT8656]
Length = 264
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPN------QTAVGISGNM 62
Y +GG+ + I G DFA++A DTRS+S +I + K+FR+ + + + + G
Sbjct: 39 YTDNGGSTLGITGADFAILAGDTRSTSGYSINTRYAPKLFRIGDDGDSSSRIVLSVVGFA 98
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + RL A + G+P+S+ A+ LS +LY++R FPYYV +L G+D GK
Sbjct: 99 ADGNALKERLDAIVKMYKYQHGKPMSVKACAQRLSTILYQKRFFPYYVHAILGGLDEDGK 158
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G +YSYDPVG E+ R G +A ++
Sbjct: 159 GALYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|336369489|gb|EGN97830.1| hypothetical protein SERLA73DRAFT_182590 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382272|gb|EGO23422.1| hypothetical protein SERLADRAFT_469320 [Serpula lacrymans var.
lacrymans S7.9]
Length = 253
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 81/137 (59%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++AIAG DF++IA DTR S +I + K+FRL ++ + ++G AD
Sbjct: 18 YSENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMF 77
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V +++ + A + + L A ++ +LY RR FPYYV +L GI+ G G VYS+
Sbjct: 78 VKKVKQRLEWYRHAHSKDMPLRAIARLIQTMLYARRFFPYYVYNILGGIEEDGTGAVYSF 137
Query: 129 DPVGHCEKVAYRLHGTS 145
DPVG E+ A R G +
Sbjct: 138 DPVGSYEREACRAAGAA 154
>gi|336464627|gb|EGO52867.1| proteasome component C5 [Neurospora tetrasperma FGSC 2508]
Length = 265
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 99/179 (55%), Gaps = 9/179 (5%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VG 57
+ Y +GG+ +AIAG DF ++A DTR +S +I S K+F++ TA +
Sbjct: 35 FDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLFKIGGTTADQKDATIVLS 94
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+ G AD + RL A G+P+S+ A+ LS +LY++R FPYYV +L G+
Sbjct: 95 VVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYVYAILGGL 154
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
D GKG +YSYDPVG E+ R G +A ++ + ++ ++++++ + AL+E
Sbjct: 155 DEEGKGAIYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVN-FKNQYEPGSGVGHALQE 212
>gi|119467908|ref|XP_001257760.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
gi|119405912|gb|EAW15863.1| proteasome component Prs3, putative [Neosartorya fischeri NRRL 181]
Length = 261
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 12/161 (7%)
Query: 2 TEAMLEH----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG 57
+ A+ EH Y +GG+ + I G DFA++A DTRS + I S K+F++ G
Sbjct: 23 SAAVREHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETG 82
Query: 58 --------ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY 109
+ G AD + RL A + G+P+S+ A+ LS +LY++R FPYY
Sbjct: 83 EGAHILLSVVGFAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYY 142
Query: 110 VQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
V +L G+D GKG +YSYDPVG E+ R G++A ++
Sbjct: 143 VHAILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIM 183
>gi|70991375|ref|XP_750536.1| proteasome component Prs3 [Aspergillus fumigatus Af293]
gi|66848169|gb|EAL88498.1| proteasome component Prs3, putative [Aspergillus fumigatus Af293]
Length = 261
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 12/159 (7%)
Query: 4 AMLEH----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG-- 57
A+ EH Y +GG+ + I G DFA++A DTRS + I S K+F++ G
Sbjct: 25 AVREHSFYPYTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEG 84
Query: 58 ------ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ 111
+ G AD + RL A + G+P+S+ A+ LS +LY++R FPYYV
Sbjct: 85 AHILLSVVGFAADGQALKERLDAVVRMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVH 144
Query: 112 VLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
+L G+D GKG +YSYDPVG E+ R G++A ++
Sbjct: 145 AILAGLDEEGKGALYSYDPVGSYEREQCRAAGSAASLIM 183
>gi|254586379|ref|XP_002498757.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
gi|238941651|emb|CAR29824.1| ZYRO0G17842p [Zygosaccharomyces rouxii]
Length = 244
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+ IAG DFA++A DTR +++ +I S + K+F + + +G AD +
Sbjct: 27 YTDNGGTVLGIAGEDFAVLAGDTRHTTDYSINSRYESKVFDCGDNIVITANGYAADGEAL 86
Query: 69 VSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
V R + + + + LSL A + LLY +R FPYYVQ ++ G+D GKG VYS
Sbjct: 87 VKRFKNSVKWYHFDHNDKKLSLNSAARNIQHLLYGKRFFPYYVQTIIAGLDEEGKGAVYS 146
Query: 128 YDPVGHCEKVAYRLHGTSAKFML 150
+DPVG E+ R G +A ++
Sbjct: 147 FDPVGSYEREQCRAGGAAASLIM 169
>gi|223993685|ref|XP_002286526.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977841|gb|EED96167.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 280
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT +AI+GPD+A++A+DTR SS I+S N K+ L + +G +G
Sbjct: 67 ERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCK 126
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D ++ S L ++ A + ++ P A+ML LY +R FPYY +L GID GK
Sbjct: 127 TDVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGK 186
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G VYSYD +G E+ + G+ F++ M ++S +++ D + EE+ +VK
Sbjct: 187 GAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVIS-HKNRLDQKR--ELGSEEVVEIVK 243
>gi|198424168|ref|XP_002121356.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 229
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 80/144 (55%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
E Y +GG ++A+AG DFA++ASDTR S I + + K +L T + SG DS
Sbjct: 19 FEPYAFNGGNILAVAGGDFAVVASDTRLSQGFMIHTRDHPKAVQLTANTVLAQSGFEGDS 78
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
L + +Q I G+ S A M+S +LY +R FPYYV ++ G+D GKG V
Sbjct: 79 LTLKKHVQMRIGMYEHNHGKTPSTSAIAAMISKMLYYKRFFPYYVYNIVAGLDNEGKGCV 138
Query: 126 YSYDPVGHCEKVAYRLHGTSAKFM 149
YSYDPVG E+ YR G + + +
Sbjct: 139 YSYDPVGSYEREQYRAAGAANELL 162
>gi|118488258|gb|ABK95948.1| unknown [Populus trichocarpa]
Length = 223
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 100/181 (55%), Gaps = 8/181 (4%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A E Y +GGT +AIAG D+ ++A+DTR S+ I++ + KI +L ++ + SG
Sbjct: 5 QARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L A+ + +S P A +LS LY +R FPYY +LVG D GK
Sbjct: 65 ADVKALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASM-SYLLSPYESEFDYTDVITMALEELTPVV 181
G VY+YD VG EKV Y G+ AK ++ + + L SP + ++ AL+ +TP+
Sbjct: 125 GCVYTYDAVGSYEKVGYSAQGSGAKLIMPVLDNQLKSP-------SPLLLPALDAVTPLT 177
Query: 182 K 182
+
Sbjct: 178 E 178
>gi|342319050|gb|EGU11002.1| Proteasome subunit beta type [Rhodotorula glutinis ATCC 204091]
Length = 289
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 80/134 (59%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+++AI+ FA+IA DTR SS I + ++F+L + A+ + G M D++ +V R
Sbjct: 21 NGGSILAISSSKFAVIAGDTRQSSGYNIETRTAKRVFQLTPEAAIAVQGFMGDAMNLVKR 80
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ + + SL A ++ +LY +R FPYY V+L GID G G VYS+DPV
Sbjct: 81 LKQRLEWYHHTHNEVPSLKSIARLVQTMLYGKRFFPYYSYVILAGIDRDGTGAVYSFDPV 140
Query: 132 GHCEKVAYRLHGTS 145
G E+ + R +G++
Sbjct: 141 GSYERESCRAYGSA 154
>gi|121709884|ref|XP_001272558.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
gi|119400708|gb|EAW11132.1| proteasome component Prs3, putative [Aspergillus clavatus NRRL 1]
Length = 261
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+ + I G DFA++A DTRS + I S K+F++ G + G
Sbjct: 34 YTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDAETGEGARILLSVVG 93
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY++R FPYYV +L G+D
Sbjct: 94 FAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A ++
Sbjct: 154 GKGALYSYDPVGSYEREQCRAAGSAASLIM 183
>gi|221117643|ref|XP_002165958.1| PREDICTED: proteasome subunit beta type-1-A-like [Hydra
magnipapillata]
Length = 226
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y GG+++AIAG DFA+IASDTR S I S N K ++L + T +G G D L +
Sbjct: 18 YSSQGGSLLAIAGEDFAVIASDTRLSEGFLIHSRNIPKTYQLTDTTILGSCGFHGDVLTL 77
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + +S A+MLS LY +R FPYY ++ G+D GKG +YS+
Sbjct: 78 TKNIKTRLVMYEHEHFKTMSCSSIAQMLSTTLYYKRFFPYYTYNIIAGLDSDGKGAIYSF 137
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASM 153
DPVG E+ YR G S ML S
Sbjct: 138 DPVGSYERETYRA-GGSCSAMLQSF 161
>gi|402077428|gb|EJT72777.1| proteasome component C5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 264
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VG 57
+ Y +GG+ +AIAG DFA++A DTR +S +I + K+FR+ T+ +
Sbjct: 34 FDPYTDNGGSTLAIAGADFAIMAGDTRMASGYSINTRFYPKVFRIGGTTSDQKDATLVLS 93
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+ G AD + RL A G+P+S A+ LS +LY++R FPYY +L G+
Sbjct: 94 VVGFAADGEALKERLDAICKMYRYRHGKPMSAKACAKRLSTILYQKRFFPYYTHAILAGL 153
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
D GKG VYSYDPVG E+ R G +A ++
Sbjct: 154 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIM 186
>gi|126274560|ref|XP_001387579.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213449|gb|EAZ63556.1| proteasome subunit [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I S Q K+F + + + +G
Sbjct: 19 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYQPKVFNVGDDIVMTANGFA 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD ++ R + ++ + G+ L++ A + LLY +R FPYYV L+ G+D G
Sbjct: 79 ADGAALIDRFKNQLQWYKFDHGGKKLNIKSAARYIQHLLYGKRFFPYYVSTLIAGLDEEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 139 KGAVYSYDPVGSYEREQCRAGGAAASLIM 167
>gi|169769575|ref|XP_001819257.1| proteasome component C5 [Aspergillus oryzae RIB40]
gi|238488110|ref|XP_002375293.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
gi|83767116|dbj|BAE57255.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220700172|gb|EED56511.1| proteasome component Prs3, putative [Aspergillus flavus NRRL3357]
Length = 261
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+ + I G DFA++A DTRS + I S K+F++ G + G
Sbjct: 34 YTDNGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEGAHIILSVVG 93
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY++R FPYYV +L G+D
Sbjct: 94 FAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A ++
Sbjct: 154 GKGALYSYDPVGSYEREQCRAAGSAASLIM 183
>gi|50427419|ref|XP_462322.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
gi|49657992|emb|CAG90828.1| DEHA2G17996p [Debaryomyces hansenii CBS767]
Length = 242
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DF+++A DTR +I S + KIF + + A+ +G
Sbjct: 19 EHRFNPYSDNGGTVLGIAGEDFSVLAGDTRQVVGYSINSRYEPKIFDVGDDIAMTANGFA 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD ++ R + ++ + G+ LS+ A + LLY +R FPYYV L+ G+D G
Sbjct: 79 ADGAALIDRFRNQLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPYYVSTLIAGLDDEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 139 KGAVYSYDPVGSYEREQCRAGGAAASLIM 167
>gi|224130004|ref|XP_002320726.1| predicted protein [Populus trichocarpa]
gi|222861499|gb|EEE99041.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 84/148 (56%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A E Y +GGT +AIAG D+ ++A+DTR S+ I++ + KI +L ++ + SG
Sbjct: 5 QARFEPYDFNGGTCVAIAGADYCVVAADTRMSTGYNILTRDYSKICKLADKCLMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L A+ + +S P A +LS LY +R FPYY +LVG D GK
Sbjct: 65 ADVKALQKVLGAKHLIYQHQHNKQMSCPAMARLLSNTLYYKRFFPYYTFNVLVGFDEEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G VY+YD VG EKV Y G+ AK ++
Sbjct: 125 GCVYTYDAVGSYEKVGYSAQGSGAKLIM 152
>gi|405957660|gb|EKC23857.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 229
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 77/141 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG DF ++ SDTR S +I + + K ++L T +G G D L +
Sbjct: 21 YAMNGGTCLAIAGEDFVVVGSDTRLSQGFSIFTRDLPKTYKLTTSTVLGACGFHGDVLTL 80
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + ++ A MLS +LY RR FPYYV L+ G+D GKG VYS+
Sbjct: 81 TKVLNARLKMFEHEHHKKMTTSEIAAMLSTMLYHRRFFPYYVYNLIAGLDEEGKGVVYSF 140
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG YR G++A +
Sbjct: 141 DPVGSYGSDGYRARGSAAAML 161
>gi|115400894|ref|XP_001216035.1| proteasome component C5 [Aspergillus terreus NIH2624]
gi|114189976|gb|EAU31676.1| proteasome component C5 [Aspergillus terreus NIH2624]
Length = 261
Score = 105 bits (263), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+ + I G DFA++A DTRS + I + K+F++ G + G
Sbjct: 34 YTDNGGSTLGITGADFAILAGDTRSVAGYNINTRYDPKVFKIGGDDETGEGAQILLSVVG 93
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY++R FPYYV +L G+D
Sbjct: 94 FAADGHALKERLDAVVKMYKYQHGKPMSVTACAQRLSTILYQKRFFPYYVHAILAGLDED 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A ++
Sbjct: 154 GKGALYSYDPVGSYEREQCRAAGSAASLIM 183
>gi|145255859|ref|XP_001399123.1| proteasome component C5 [Aspergillus niger CBS 513.88]
gi|134084720|emb|CAK43377.1| unnamed protein product [Aspergillus niger]
gi|350630872|gb|EHA19244.1| hypothetical protein ASPNIDRAFT_54260 [Aspergillus niger ATCC 1015]
Length = 260
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM------ 62
Y +GG+ + I G DFA++A DTRS + I S K+F++ G N+
Sbjct: 33 YTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGANIVLSVVG 92
Query: 63 --ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY++R FPYYV +L G+D
Sbjct: 93 FAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDED 152
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A ++
Sbjct: 153 GKGALYSYDPVGSYEREQCRAAGSAASLIM 182
>gi|358373509|dbj|GAA90107.1| proteasome component Prs3 [Aspergillus kawachii IFO 4308]
Length = 260
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM------ 62
Y +GG+ + I G DFA++A DTRS + I S K+F++ G N+
Sbjct: 33 YTDNGGSTLGITGSDFAILAGDTRSVAGYNINSRYVPKVFKIGGDDESGEGANIVLSVVG 92
Query: 63 --ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY++R FPYYV +L G+D
Sbjct: 93 FAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDED 152
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A ++
Sbjct: 153 GKGALYSYDPVGSYEREQCRAAGSAASLIM 182
>gi|393229883|gb|EJD37498.1| proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 242
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 80/137 (58%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++A+AG DFA++A DTR + +I + K+FRL ++ + ++G AD
Sbjct: 9 YTENGGTILAVAGADFAVVAGDTRQTEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMF 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V +++ + A + + L A M+ +LY +R FPYYV +L GID G G VYS+
Sbjct: 69 VKKVKQRLEWYRHAHSKDMPLQSIARMIQTMLYAKRFFPYYVYNILGGIDEQGVGAVYSF 128
Query: 129 DPVGHCEKVAYRLHGTS 145
DPVG E+ R G +
Sbjct: 129 DPVGSYERETCRAAGAA 145
>gi|403216524|emb|CCK71021.1| hypothetical protein KNAG_0F03590 [Kazachstania naganishii CBS
8797]
Length = 248
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR +++ +I S ++ K+F + + + +G
Sbjct: 27 EHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRSESKVFDVGDGIVISANGFA 86
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
ADS +V R + + + LSL A + LLY +R FPYYV ++ G+D G
Sbjct: 87 ADSTALVKRFRNSLKWYHFNENEKRLSLSAAARNIQHLLYGKRFFPYYVHTIIAGLDEEG 146
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 147 KGAVYSFDPVGSYEREQCRAGGAAASLIM 175
>gi|296805321|ref|XP_002843485.1| proteasome component C5 [Arthroderma otae CBS 113480]
gi|238844787|gb|EEQ34449.1| proteasome component C5 [Arthroderma otae CBS 113480]
Length = 261
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM------ 62
Y +GG+ + IAG +FA++A DTRS S I + K+F++ G G+M
Sbjct: 34 YTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHMILCVVG 93
Query: 63 --ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + +P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 94 FSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A M+
Sbjct: 154 GKGALYSYDPVGSYEREFCRAAGSAASLMM 183
>gi|402222920|gb|EJU02985.1| N-terminal nucleophile aminohydrolase [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++AIAG DF++IA DTR + +I + K+F+L ++ + ++G AD
Sbjct: 22 YAENGGTILAIAGKDFSVIAGDTRQTEGYSIQTRYAPKVFKLTDRAVLAVNGFQADCSTF 81
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V +++ I A + + L A M+ +LY +R FPYY +L GI+ G G VYS+
Sbjct: 82 VKKVKQRIEWYRHAHSKQMPLKAIARMIQGMLYGKRFFPYYTYNILGGIEEDGTGAVYSF 141
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG E+ A R G ++ +
Sbjct: 142 DPVGSYEREACRAAGAASSLI 162
>gi|367011887|ref|XP_003680444.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
gi|359748103|emb|CCE91233.1| hypothetical protein TDEL_0C03440 [Torulaspora delbrueckii]
Length = 241
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 1/143 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++ IAG DFA++A DTR +++ +I S ++ K+F + + +G AD +
Sbjct: 24 YTDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRHESKVFDCGDNIVMSANGFAADGEAL 83
Query: 69 VSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
V R + + + + LSL A + LLY +R FPYYV ++ G+D GKG VYS
Sbjct: 84 VKRFKNSVKWYHFDHNDKKLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYS 143
Query: 128 YDPVGHCEKVAYRLHGTSAKFML 150
+DPVG E+ R G +A ++
Sbjct: 144 FDPVGSYEREQCRAGGAAASLIM 166
>gi|449548524|gb|EMD39490.1| hypothetical protein CERSUDRAFT_80861 [Ceriporiopsis subvermispora
B]
Length = 252
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 14/182 (7%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AIAG DF +IA DTR S +I + K+FRL ++ + ++G AD
Sbjct: 17 YSDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMF 76
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
V +++ E R A AK PL A ++ +LY +R FPYYV +L GI+ G G VY
Sbjct: 77 VKKVKQRLEWYRHAHAKDMPLR--AIARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVY 134
Query: 127 SYDPVGHCEKVAYRLHGTSAKFM---LASMSYLLS-------PYESEFDYTDVITMALEE 176
S+DPVG E+ A R G + + L + Y + P+ + +DV+ + ++
Sbjct: 135 SFDPVGSYEREACRAAGAAQSLVQPFLDNQIYFKNQAAAPNQPHPAHLPLSDVLAIVIDS 194
Query: 177 LT 178
T
Sbjct: 195 FT 196
>gi|156847580|ref|XP_001646674.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
gi|156117353|gb|EDO18816.1| hypothetical protein Kpol_1028p92 [Vanderwaltozyma polyspora DSM
70294]
Length = 242
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR +++ +I S + K+F + + +G
Sbjct: 19 EHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFA 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + I + + LSL A + LLY +R FPYYV ++ G+D G
Sbjct: 79 ADGEALVKRFKNSIKWYHFDNNDKTLSLSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 139 KGAVYSFDPVGSYEREQCRAGGAAASLIM 167
>gi|315045602|ref|XP_003172176.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
gi|311342562|gb|EFR01765.1| proteasome component C5 [Arthroderma gypseum CBS 118893]
Length = 261
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM------ 62
Y +GG+ + IAG +FA++A DTRS S I S K+F++ G G++
Sbjct: 34 YTDNGGSTLGIAGDNFAILAGDTRSVSGYNINSRYAPKVFKIGADEHTGEGGHIILCVVG 93
Query: 63 --ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + +P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 94 FSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A M+
Sbjct: 154 GKGALYSYDPVGSYEREFCRAAGSAASLMM 183
>gi|403412828|emb|CCL99528.1| predicted protein [Fibroporia radiculosa]
Length = 252
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++AIAG DF +IA DTR S +I + K+FRL + + ++G AD
Sbjct: 17 YTENGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVFRLTERAVLAVNGFAADGNMF 76
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V +++ + A + + L A ++ +LY +R FPYYV +L GI+ G G VYS+
Sbjct: 77 VKKVKQRLEWYRHAHAKEMPLRAIARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVYSF 136
Query: 129 DPVGHCEKVAYRLHGTS 145
DPVG E+ A R G +
Sbjct: 137 DPVGSYEREACRAAGAA 153
>gi|389745045|gb|EIM86227.1| proteasome subunit [Stereum hirsutum FP-91666 SS1]
Length = 258
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y Q+GGT++AIAG DF +IASDTR + +I + K F+L ++ + ++G AD
Sbjct: 23 YTQNGGTILAIAGADFTVIASDTRQTEGFSIQTRYAPKAFQLTDRAVLAVNGFAADGNMF 82
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
V +++ E R A AK PL A ++ +LY RR FPYYV +L GI+ G G VY
Sbjct: 83 VKQVKQRLEWYRHAHAKDMPLR--AIARLIQTMLYGRRFFPYYVYNILGGIEEDGTGAVY 140
Query: 127 SYDPVGHCEKVAYRLHGTS 145
S+DPVG E+ A R G +
Sbjct: 141 SFDPVGSYEREACRAAGAA 159
>gi|392559294|gb|EIW52479.1| proteasome subunit [Trametes versicolor FP-101664 SS1]
Length = 252
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AIAG DF +IA DTR S +I + K+FRL ++ + ++G AD
Sbjct: 17 YTDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMF 76
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
V +++ E R A AK PL A ++ +LY +R FPYYV +L GI+ G G VY
Sbjct: 77 VKKVKQRLEWYRHAHAKDMPLR--AIARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVY 134
Query: 127 SYDPVGHCEKVAYRLHGTS 145
S+DPVG E+ A R G +
Sbjct: 135 SFDPVGSYEREACRAAGAA 153
>gi|395325433|gb|EJF57855.1| proteasome subunit [Dichomitus squalens LYAD-421 SS1]
Length = 252
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 81/139 (58%), Gaps = 4/139 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AIAG DF +IA DTR S +I + K+FRL ++ + ++G AD
Sbjct: 17 YTDNGGTILAIAGADFTVIAGDTRQSEGYSIQTRYAPKVFRLTDRAVLAVNGFAADGNMF 76
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
V +++ E R A AK PL A ++ +LY +R FPYYV +L GI+ G G VY
Sbjct: 77 VKKVKQRLEWYRHAHAKDMPLH--AIARLIQTMLYAQRFFPYYVYNILGGIEEDGSGAVY 134
Query: 127 SYDPVGHCEKVAYRLHGTS 145
S+DPVG E+ A R G +
Sbjct: 135 SFDPVGSYEREACRAAGAA 153
>gi|340992803|gb|EGS23358.1| putative proteasome protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 265
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E + Y +GG+ +AIAG DF ++A DTR +S +I S K++++ TA
Sbjct: 32 EHRFDPYADNGGSTLAIAGADFTIMAGDTRLTSGYSINSRYHPKLYKIGGTTADQSDATI 91
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL A G+P+S+ A+ LS +LY++R FPYY +L
Sbjct: 92 VLSVVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYAYAIL 151
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG VYSYDPVG E+ R G +A ++
Sbjct: 152 GGLDEEGKGAVYSYDPVGSYEREQCRAAGAAASLIM 187
>gi|241954356|ref|XP_002419899.1| proteasome component, putative [Candida dubliniensis CD36]
gi|223643240|emb|CAX42114.1| proteasome component, putative [Candida dubliniensis CD36]
Length = 245
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I S + KI + + + +G
Sbjct: 22 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFA 81
Query: 63 ADSLEVVSRL-QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + ++ R Q+ I + G+ L++ A + LLY +R+FPYYV L+ G+D G
Sbjct: 82 ADGIALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRLFPYYVSTLIAGLDEEG 141
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 142 KGAVYSYDPVGSYEREQCRAGGAAASLIM 170
>gi|365990732|ref|XP_003672195.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
gi|343770970|emb|CCD26952.1| hypothetical protein NDAI_0J00600 [Naumovozyma dairenensis CBS 421]
Length = 241
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR +++ +I S + K+F + + +G
Sbjct: 18 EHAFNPYTDNGGTILGIAGEDFAILAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + + + + LS+ A + LLY +R FPYYV ++ G+D G
Sbjct: 78 ADGEALVKRFKNSLKWYHFDHNDKKLSMKSAARNIQHLLYGKRFFPYYVHTIIAGLDENG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIM 166
>gi|320163476|gb|EFW40375.1| proteasome subunit beta type-1 [Capsaspora owczarzaki ATCC 30864]
Length = 238
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 82/141 (58%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+A+AG +FA++ASDTR S I + N K F L ++T + G D L +
Sbjct: 29 YASNGGTVVAVAGENFAVVASDTRLSEYYGIHTRNCPKTFVLSDKTVLASCGFHGDVLTL 88
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ + + + ++ A+MLS LY RR FP+Y ++ G+D +GKG VYSY
Sbjct: 89 TKNIFTRLRKYEHQHEKTMATHAIAQMLSNTLYYRRFFPFYTYNVIGGLDESGKGAVYSY 148
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG E+ +YR GT++ +
Sbjct: 149 DPVGSYERESYRAAGTASALL 169
>gi|391863506|gb|EIT72814.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Aspergillus oryzae 3.042]
Length = 261
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+ + I G DFA++A DTRS + I S K+F++ G + G
Sbjct: 34 YTDNGGSTLGITGADFAILAGDTRSVAGYNINSRYAPKVFKIGGDDDTGEGAHIILSVVG 93
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY++R FPYYV +L G+D
Sbjct: 94 FAADGQALKERLDAVVKMYKYQHGKPMSVRACAQRLSTILYQKRFFPYYVHAILAGLDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+G +YSYDPVG E+ R G++A ++
Sbjct: 154 GEGALYSYDPVGSYEREQCRAAGSAASLIM 183
>gi|50308397|ref|XP_454200.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643335|emb|CAG99287.1| KLLA0E05633p [Kluyveromyces lactis]
Length = 240
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 6/180 (3%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++ IAG DFA++A DTR +++ +I S + K+F + + +G AD +
Sbjct: 24 YSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFECEDNILISANGFAADGEAL 83
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V R + + L++ A + LLY +R+FPYYV ++ G+D GKG VYS+
Sbjct: 84 VKRFKNSQMWYHFNHNKKLTIKSAARNIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSF 143
Query: 129 DPVGHCEKVAYRLHGTSAKFM---LASMSYLLSPYESEFDYT---DVITMALEELTPVVK 182
DPVG E+ R G++A + L + L + YE + + T +V + +EE+ +V+
Sbjct: 144 DPVGSYEREQCRAGGSAASLIMPFLDNQVNLKNQYEPDSNGTKRKEVKYLGVEEVIKLVR 203
>gi|358054309|dbj|GAA99235.1| hypothetical protein E5Q_05929 [Mixia osmundae IAM 14324]
Length = 250
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 81/137 (59%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++A++ DFA++ASDTR S +I S Q ++F L ++T + G MADS +
Sbjct: 24 YSENGGTILAVSSRDFAVVASDTRQSEGYSIQSRYQPRVFALTDETVMATQGFMADSNTL 83
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V +L+ + + L A ++ +LY +R FPYY V+L GID G G VYS+
Sbjct: 84 VKKLRQRLEWYFHTHQKYPDLTAIARLVQTMLYGKRFFPYYSYVILGGIDRDGTGAVYSF 143
Query: 129 DPVGHCEKVAYRLHGTS 145
DPVG E+ + R G +
Sbjct: 144 DPVGSYERESCRSAGAA 160
>gi|406862546|gb|EKD15596.1| proteasome component C5 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 264
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ +AI+G DF ++A DTRS+S I + K+F++ T+ + + G
Sbjct: 37 YTDNGGSTLAISGADFTIMAGDTRSTSGYNINTRYAPKVFKIGGTTSSQDDATLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 97 FAADGEALKERLDAVVKMYRYQHGKPMSVKACAQRLSTILYGKRFFPYYVTAILGGLDEE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+G VYSYDPVG E+ R G +A ++
Sbjct: 157 GRGAVYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|254574222|ref|XP_002494220.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238034019|emb|CAY72041.1| Beta 6 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328353959|emb|CCA40356.1| 20S proteasome subunit beta 6 [Komagataella pastoris CBS 7435]
Length = 243
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 83/148 (56%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR ++ +I S + K+F + ++ + +G
Sbjct: 21 EHQFNPYSDNGGTVLGIAGEDFAILAGDTRHTTGYSINSRYEPKVFSVGDELLITANGFA 80
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD +V R + ++ + L++ A + LLY +R FPYYV ++ G+D GK
Sbjct: 81 ADGDALVKRFRNQLKWYHFDHKKNLTIKSAARFIQHLLYGKRFFPYYVHTIIAGLDEEGK 140
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G VYS+DPVG E+ R G +A ++
Sbjct: 141 GAVYSFDPVGSYEREQCRAGGGAASLIM 168
>gi|410075834|ref|XP_003955499.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
gi|372462082|emb|CCF56364.1| hypothetical protein KAFR_0B00650 [Kazachstania africana CBS 2517]
Length = 241
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR +++ +I S + K+F + + +G
Sbjct: 18 EHRFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + I + + LS+ A + LLY +R FPYYV ++ G+D G
Sbjct: 78 ADGEALVKRFKNSIKWYHFDHNDKKLSIKSAARNIQHLLYGKRFFPYYVHTIIAGLDEEG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIM 166
>gi|363755242|ref|XP_003647836.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891872|gb|AET41019.1| hypothetical protein Ecym_7171 [Eremothecium cymbalariae
DBVPG#7215]
Length = 242
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA+IA DTR ++ +I S N+ K+F + + +G
Sbjct: 19 EHRFNPYDDNGGTILGIAGEDFAVIAGDTRHTTGYSINSRNEPKVFDCGDNILISANGFA 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V + + + + + ++L A + LLY +R+FPYYV ++ G+D G
Sbjct: 79 ADGDALVKKFKNNLKWYHFDHNNKKMTLKSAARNIQHLLYGKRMFPYYVHTIIAGLDEDG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 139 KGAVYSFDPVGSYEREQCRAGGAAASIIM 167
>gi|412993855|emb|CCO14366.1| predicted protein [Bathycoccus prasinos]
Length = 243
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 83/147 (56%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A Y +GGTVMA+AG D+ + A+DTR S+ +I++ K+ + +T + +G MA
Sbjct: 26 ATWSPYDNNGGTVMAVAGEDYVICAADTRMSTGYSIMTRQYTKVDEMSPKTLMASAGFMA 85
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D+ + L+ ++ A +P+ A+MLS LY RR FPYY ++ G+D GKG
Sbjct: 86 DAATLKKLLKGRCDQYQFANNKPIGCVAFAQMLSNTLYMRRFFPYYAFNIVAGLDAEGKG 145
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFML 150
V++YD VG E+ Y G+ + ++
Sbjct: 146 AVFTYDAVGSYERTNYSCQGSGQQLIM 172
>gi|255714573|ref|XP_002553568.1| KLTH0E01826p [Lachancea thermotolerans]
gi|238934950|emb|CAR23131.1| KLTH0E01826p [Lachancea thermotolerans CBS 6340]
Length = 242
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR +++ +I S + K+F + + +G
Sbjct: 19 EHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNILISANGFA 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R Q + + + LS+ A + LLY +R FPYYV ++ G+D G
Sbjct: 79 ADGNALVKRFQNSLKWYHFDHNDKKLSMRSAARNIQHLLYGKRFFPYYVHTIIAGLDEEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 139 KGAVYSFDPVGSYEREQCRAGGAAASLIM 167
>gi|406602407|emb|CCH46023.1| Proteasome subunit beta type-1-A [Wickerhamomyces ciferrii]
Length = 242
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 80/148 (54%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DF+++A DTR + +I S + K+F + V +G
Sbjct: 20 EHRFNPYSDNGGTILGIAGEDFSVLAGDTRHTVGYSINSRYEPKVFDAGDNIVVSANGFS 79
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD +VSR + + + +SL A + +LY +R FPYYV ++ G+D GK
Sbjct: 80 ADGNALVSRFKNHLKWYHFNNNKKISLSSAARFIQHMLYGKRFFPYYVHTIIAGLDDEGK 139
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G VYS+DPVG E+ R G +A ++
Sbjct: 140 GAVYSFDPVGSYEREQCRAGGAAASLIM 167
>gi|340374856|ref|XP_003385953.1| PREDICTED: proteasome subunit beta type-1-B-like [Amphimedon
queenslandica]
Length = 223
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A++G DF++IASDTR S I S + K ++L + +G G
Sbjct: 9 EVQWSPYSWNGGTVLAVSGEDFSVIASDTRLSEGFQIYSRDFPKTYQLGDNVVLGSCGFQ 68
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D + ++A++ + +S A++LS +LY RR FPYY +L G+D GK
Sbjct: 69 GDVTTLNKVIEAQLKIYDHIYQKKMSCESLAQLLSTILYTRRFFPYYTYNILAGLDSKGK 128
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G V+S+DP+G E+ YR G+++ +
Sbjct: 129 GCVFSFDPIGSYEREVYRAGGSASSML 155
>gi|171680321|ref|XP_001905106.1| hypothetical protein [Podospora anserina S mat+]
gi|170939787|emb|CAP65013.1| unnamed protein product [Podospora anserina S mat+]
Length = 264
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 8/153 (5%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VG 57
+ Y +GG+ +AIAG DF ++A DTR +S +I S K+F++ T+ +
Sbjct: 34 FDPYTDNGGSTLAIAGADFTIMAGDTRLTSGYSINSRFHPKVFKIGGTTSDQSDATLVLS 93
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+ G AD + RL A G+P+S+ A+ LS +LY++R FPYY +L G+
Sbjct: 94 VVGFAADGEALKERLDAICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYAYAILGGL 153
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
D GKG VYSYDPVG E+ R G +A ++
Sbjct: 154 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIM 186
>gi|389626457|ref|XP_003710882.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|351650411|gb|EHA58270.1| proteasome component C5 [Magnaporthe oryzae 70-15]
gi|440470291|gb|ELQ39366.1| proteasome component C5 [Magnaporthe oryzae Y34]
gi|440486750|gb|ELQ66588.1| proteasome component C5 [Magnaporthe oryzae P131]
Length = 265
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ +AIAG DFA++A DTR +S +I + K+F++ TA + + G
Sbjct: 38 YTDNGGSTLAIAGDDFAIMAGDTRMASGYSINTRFYPKVFKIGGTTADNSDATLVLSVVG 97
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A G+P+++ A+ LS +LY++R FPYY +L GID
Sbjct: 98 FAADGEALKERLDAICKIYRYRHGKPMTVKACAKRLSTILYQKRFFPYYTHAILAGIDEE 157
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G G VYSYDPVG E+ R G +A ++
Sbjct: 158 GHGAVYSYDPVGSYEREQCRAGGAAASLIM 187
>gi|258564630|ref|XP_002583060.1| proteasome component C5 [Uncinocarpus reesii 1704]
gi|237908567|gb|EEP82968.1| proteasome component C5 [Uncinocarpus reesii 1704]
Length = 259
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA-------VGISGN 61
Y +GG+ + I GP+FA++A DTRS S I + K+F++ A + + G
Sbjct: 33 YTDNGGSTLGITGPNFAILAGDTRSVSGYNINTRFAPKVFKIGADDAGEGGHIILSVVGF 92
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + RL A + G+P+S+ A+ LS +LY +R FPYYV +L G+D G
Sbjct: 93 SADGQALKERLDAIVKMYEYHHGKPMSVKACAQRLSTILYSKRFFPYYVHAILGGLDEDG 152
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG +YSYDPVG E+ R G +A ++
Sbjct: 153 KGALYSYDPVGSYEREYCRAAGAAASLIM 181
>gi|302501484|ref|XP_003012734.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|302660909|ref|XP_003022128.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
gi|291176294|gb|EFE32094.1| hypothetical protein ARB_00985 [Arthroderma benhamiae CBS 112371]
gi|291186059|gb|EFE41510.1| hypothetical protein TRV_03731 [Trichophyton verrucosum HKI 0517]
Length = 261
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM------ 62
Y +GG+ + IAG +FA++A DTRS S I + K+F++ G G++
Sbjct: 34 YTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHIILCVVG 93
Query: 63 --ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + +P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 94 FSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A M+
Sbjct: 154 GKGALYSYDPVGSYEREFCRAAGSAASLMM 183
>gi|327304499|ref|XP_003236941.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
gi|326459939|gb|EGD85392.1| hypothetical protein TERG_01664 [Trichophyton rubrum CBS 118892]
Length = 261
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM------ 62
Y +GG+ + IAG +FA++A DTRS S I + K+F++ G G++
Sbjct: 34 YTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHIILCVVG 93
Query: 63 --ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + +P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 94 FSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A M+
Sbjct: 154 GKGALYSYDPVGSYEREFCRAAGSAASLMM 183
>gi|326472775|gb|EGD96784.1| hypothetical protein TESG_04214 [Trichophyton tonsurans CBS 112818]
gi|326484951|gb|EGE08961.1| proteasome component C5 [Trichophyton equinum CBS 127.97]
Length = 261
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM------ 62
Y +GG+ + IAG +FA++A DTRS S I + K+F++ G G++
Sbjct: 34 YTDNGGSTLGIAGDNFAILAGDTRSVSGYNINTRYAPKVFKIGADEHTGEGGHIILCVVG 93
Query: 63 --ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + +P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 94 FSADGRALKERLDAIVKMYEYHHNKPMSVRACAQRLSTILYSKRFFPYYVHAILAGVDEE 153
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G++A M+
Sbjct: 154 GKGALYSYDPVGSYEREFCRAAGSAASLMM 183
>gi|393212888|gb|EJC98386.1| 20S proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 266
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
E Y GGT++AIAG DF++IA DTR + I + K+FRL ++ + ++G AD
Sbjct: 24 FEPYADSGGTILAIAGADFSVIAGDTRQTDYYNIQTRYAPKVFRLTDKAVLAVNGFAADG 83
Query: 66 LEVVSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
+ +++ E R A AK PL A ++ +LY +R FPYYV +L GI+ G G
Sbjct: 84 NMFIKKVKQRLEWYRHAHAKDMPLR--AVARLIQTMLYAQRFFPYYVYNILGGIEEDGSG 141
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFM 149
VYS+DPVG E+ A R G + + +
Sbjct: 142 AVYSFDPVGSYEREACRAAGAAQQLV 167
>gi|302309124|ref|NP_986343.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|299788212|gb|AAS54167.2| AGL324Wp [Ashbya gossypii ATCC 10895]
gi|374109588|gb|AEY98493.1| FAGL324Wp [Ashbya gossypii FDAG1]
Length = 243
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 80/142 (56%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++ IAG DFA++A DTR ++ +I S + K+F + + +G AD +
Sbjct: 27 YDDNGGTILGIAGEDFAVLAGDTRHTTGYSINSREEPKVFDCGDNILISANGFAADGDAL 86
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V R + + + +++ A + LLY +R+FPYYV ++ G+D GKG VYSY
Sbjct: 87 VKRFKNSMKWYRFDHNKKMTIKSAARSIQHLLYGKRMFPYYVHTIIAGLDEEGKGAVYSY 146
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
DPVG E+ R G +A ++
Sbjct: 147 DPVGSYEREQCRAGGAAASLIM 168
>gi|313231365|emb|CBY08480.1| unnamed protein product [Oikopleura dioica]
Length = 242
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 81/141 (57%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y HGGT +AIAG DF L+ASDTR +G I + + + + A+G G D+ +
Sbjct: 34 YSWHGGTCLAIAGDDFVLMASDTRLGEHGGIYTRELNRNSPVTDHCAIGQCGFQGDARVL 93
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ ++A+I + + P A MLS +LY +R FPYYV ++ G+DG GKG V+SY
Sbjct: 94 LQNVKAKIRIYEHQHMEQPTAPAIAAMLSTMLYYKRFFPYYVYNIVAGLDGDGKGSVFSY 153
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++V +G++ +
Sbjct: 154 DPVGSYDQVPMVCYGSAQNLI 174
>gi|295672922|ref|XP_002797007.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282379|gb|EEH37945.1| proteasome component C5 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 266
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+ + IAG D+A++A DTRS + +I + K+F++ G + G
Sbjct: 37 YTDNGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFKIGEDDEGGEGAHLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY +R FPYYV +L GID
Sbjct: 97 FAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHAILGGIDED 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREYCRAAGAAASLIM 186
>gi|344306709|ref|XP_003422027.1| PREDICTED: hypothetical protein LOC100675710 [Loxodonta africana]
Length = 560
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/135 (36%), Positives = 84/135 (62%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
TV+AIAG DF+++ASDTR S ++ + + K ++L ++T +G SG D L + ++A
Sbjct: 358 TVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEA 417
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHC 134
+ + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+DPVG
Sbjct: 418 RLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSY 477
Query: 135 EKVAYRLHGTSAKFM 149
++ +++ G+++ +
Sbjct: 478 QRDSFKAGGSASAML 492
>gi|384497220|gb|EIE87711.1| hypothetical protein RO3G_12422 [Rhizopus delemar RA 99-880]
Length = 232
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 97/181 (53%), Gaps = 11/181 (6%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
E Y +GGT +AIAG DF ++A+DTR S+ I S K ++L + + ++G AD
Sbjct: 20 FEPYDDNGGTSVAIAGKDFCIVAADTRQSTGYNINSRFSPKAYKLSETSVIAMNGFHADG 79
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
L + L + + + +S A+MLS+ LY++R FPYY +L G+D GKG V
Sbjct: 80 LTLKKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEGKGAV 139
Query: 126 YSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPY-ESEFDYTDVITMALE--ELTPVVK 182
Y YD +G E+ R G++A L+ P+ +++ ++ ++LE EL +K
Sbjct: 140 YCYDAIGSYEREKCRASGSAAA--------LIQPFLDNQVSKKNMQNVSLEDIELDEAIK 191
Query: 183 V 183
V
Sbjct: 192 V 192
>gi|392866253|gb|EAS28865.2| proteasome component C5 [Coccidioides immitis RS]
Length = 260
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL-PNQTAVG------ISGN 61
Y +GG+ + I GPDFA++A DTRS S I + KIF++ ++T G + G
Sbjct: 34 YTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGF 93
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + RL A + G+ +S+ A+ LS +LY +R FPYYV +L G+D G
Sbjct: 94 SADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLDEDG 153
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG +YSYDPVG E+ R G +A ++
Sbjct: 154 KGALYSYDPVGSYEREYCRAAGAAASLIM 182
>gi|119185113|ref|XP_001243373.1| hypothetical protein CIMG_07269 [Coccidioides immitis RS]
Length = 259
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL-PNQTAVG------ISGN 61
Y +GG+ + I GPDFA++A DTRS S I + KIF++ ++T G + G
Sbjct: 33 YTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGF 92
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + RL A + G+ +S+ A+ LS +LY +R FPYYV +L G+D G
Sbjct: 93 SADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLDEDG 152
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG +YSYDPVG E+ R G +A ++
Sbjct: 153 KGALYSYDPVGSYEREYCRAAGAAASLIM 181
>gi|303313738|ref|XP_003066878.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106545|gb|EER24733.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032575|gb|EFW14527.1| proteasome component C5 [Coccidioides posadasii str. Silveira]
Length = 259
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 83/149 (55%), Gaps = 7/149 (4%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL-PNQTAVG------ISGN 61
Y +GG+ + I GPDFA++A DTRS S I + KIF++ ++T G + G
Sbjct: 33 YTDNGGSTLGITGPDFAILAGDTRSVSGYNINTRFAPKIFKIGADETGEGGHIILSVVGF 92
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + RL A + G+ +S+ A+ LS +LY +R FPYYV +L G+D G
Sbjct: 93 SADGQALKERLDAIVKMYEYHHGKRMSVKACAQRLSTILYSKRFFPYYVHAILGGLDEDG 152
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG +YSYDPVG E+ R G +A ++
Sbjct: 153 KGALYSYDPVGSYEREYCRAAGAAASLIM 181
>gi|261201302|ref|XP_002627051.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239592110|gb|EEQ74691.1| proteasome component C5 [Ajellomyces dermatitidis SLH14081]
gi|239611727|gb|EEQ88714.1| proteasome component C5 [Ajellomyces dermatitidis ER-3]
gi|327348257|gb|EGE77114.1| proteasome component C5 [Ajellomyces dermatitidis ATCC 18188]
Length = 266
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+ + IAG D+A++A DTRS S I + K+F++ G + G
Sbjct: 37 YTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEDNEGGEGAHLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ L+ +LY +R FPYYV +L GID
Sbjct: 97 FAADGRALKERLDAIVKMYKYRHGKPMSVKACAQRLATILYSKRFFPYYVHAILAGIDEE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREYCRAAGAAASLIM 186
>gi|50287473|ref|XP_446166.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525473|emb|CAG59090.1| unnamed protein product [Candida glabrata]
Length = 242
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR +++ +I S + K+F + + +G
Sbjct: 19 EHRFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIIMSANGFA 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + I + + LS+ A + LLY +R FPYYV ++ G+D G
Sbjct: 79 ADGEALVKRFKNSIKWYHFDHNDKKLSISSAARNIQHLLYGKRFFPYYVHTIIAGLDDEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 139 KGAVYSFDPVGSYEREQCRAGGAAASLIM 167
>gi|367001675|ref|XP_003685572.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
gi|357523871|emb|CCE63138.1| hypothetical protein TPHA_0E00420 [Tetrapisispora phaffii CBS 4417]
Length = 241
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR +++ +I S + K+F + + +G
Sbjct: 18 EHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDDIIISANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + I + + L+L A + LLY +R FPYYV ++ G+D G
Sbjct: 78 ADGEALVKRFKNSIKWYHFDNNDKKLALSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 138 KGAVYSFDPVGSYEREFCRAGGAAASLIM 166
>gi|255076203|ref|XP_002501776.1| predicted protein [Micromonas sp. RCC299]
gi|226517040|gb|ACO63034.1| predicted protein [Micromonas sp. RCC299]
Length = 229
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 83/149 (55%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
T A Y +GGTV+A+AG D+ + A+DTR S+ I++ + KI ++ ++ + +G
Sbjct: 10 TRANWSPYDNNGGTVLAVAGEDYVVCAADTRMSTGYNILTRDYKKIDQMSDKCVLASAGF 69
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
MAD++ + L+A +P+ A+MLS LY RR FPYY ++ G+D G
Sbjct: 70 MADAVTLKKTLKARCTTYEFQNDKPMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDAEG 129
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG V++YD VG E+ Y G+ ++
Sbjct: 130 KGAVFTYDAVGSYERTNYSCQGSGQGLIM 158
>gi|58268196|ref|XP_571254.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113318|ref|XP_774684.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257328|gb|EAL20037.1| hypothetical protein CNBF3630 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227489|gb|AAW43947.1| hypothetical protein CNF01080 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 272
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DF++IA DTR S +I + K+++L ++ + +G AD
Sbjct: 27 YSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGFAADGNNF 86
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V R++ + A + + L A M+ +LY +R FPYYV +L GI+ G G VYS+
Sbjct: 87 VKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSF 146
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG E+ A R G + +
Sbjct: 147 DPVGSYEREACRAAGAAQSLI 167
>gi|384485678|gb|EIE77858.1| hypothetical protein RO3G_02562 [Rhizopus delemar RA 99-880]
Length = 232
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
E Y +GGT +AIAG DF ++A+DTR S+ I S K ++L + + ++G AD
Sbjct: 20 FEPYDDNGGTSVAIAGKDFCIVAADTRQSTGYNINSRFAPKAYKLSETSVIAMNGFHADG 79
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
L + L + + + +S A+MLS+ LY++R FPYY +L G+D GKG V
Sbjct: 80 LTLKKVLDQRLKWYKFSHDKDMSCTALAQMLSITLYQKRFFPYYSFCVLGGVDEEGKGAV 139
Query: 126 YSYDPVGHCEKVAYRLHGTSA 146
Y YD +G E+ R G++A
Sbjct: 140 YCYDAIGSYEREKCRASGSAA 160
>gi|344305208|gb|EGW35440.1| proteasome component C5 [Spathaspora passalidarum NRRL Y-27907]
Length = 242
Score = 102 bits (254), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I S + KIF + + + +G
Sbjct: 19 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKIFDVGDNIVMTANGFA 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + ++ + + ++ + G L + A + LLY +R FPYYV L+ G+D G
Sbjct: 79 ADGVALIDKFRQQLKWYKFDNFGGKLEIKSAARYIQHLLYGKRFFPYYVSTLIAGLDEEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 139 KGAVYSYDPVGSYEREQCRAGGAAASLIM 167
>gi|405121415|gb|AFR96184.1| proteasome subunit [Cryptococcus neoformans var. grubii H99]
Length = 272
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+++AIAG DF++IA DTR S +I + K+++L ++ + +G AD
Sbjct: 27 YSDNGGSILAIAGKDFSIIAGDTRQSEGYSIQTRYARKVWQLTDKVVLATNGFAADGNNF 86
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V R++ + A + + L A M+ +LY +R FPYYV +L GI+ G G VYS+
Sbjct: 87 VKRVKQRLEWYEHAHNKSMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEEDGSGAVYSF 146
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG E+ A R G + +
Sbjct: 147 DPVGSYEREACRAAGAAQSLI 167
>gi|365762155|gb|EHN03761.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 241
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR+ ++ +I S + K+F + V +G
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNLVVSANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + + + + LS+ A + LLY +R FPYYV ++ G+D G
Sbjct: 78 ADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIM 166
>gi|407921854|gb|EKG14992.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 266
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 9/176 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL-----PNQTA---VGISG 60
Y +GG+ + I+G DF +IA DTRS+S I + Q K+F++ N+ A + + G
Sbjct: 39 YTDNGGSTLGISGKDFTIIAGDTRSTSGYNINTRYQPKLFKIGGEGPDNEGATIVLSVVG 98
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 99 FAADGAALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYGKRFFPYYVHAILGGLDEE 158
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
G+G +YSYDPVG E+ R G +A ++ + ++ +++++ + ALEE
Sbjct: 159 GRGALYSYDPVGSYEREQCRAGGAAASLIMPFLDNQVN-FKNQYIPGSGVGHALEE 213
>gi|238578402|ref|XP_002388706.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
gi|215450229|gb|EEB89636.1| hypothetical protein MPER_12245 [Moniliophthora perniciosa FA553]
Length = 165
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++AI G +F++IA DTR S +I + K+FRL ++ + ++G AD
Sbjct: 18 YSENGGTILAIGGANFSVIAGDTRQSEGYSIQTRYAPKVFRLTDKAVLAVNGFAADGNMF 77
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
V +++ E R A AK PL A ++ +LY RR FPYYV +L GI+ G G VY
Sbjct: 78 VKKVRQRLEWYRHAHAKDMPLR--AIARLIQTMLYARRFFPYYVYNILGGIEEDGSGAVY 135
Query: 127 SYDPVGHCEKVAYRLHGTS 145
S+DPVG E+ + R G +
Sbjct: 136 SFDPVGSYERESCRAAGAA 154
>gi|396457904|ref|XP_003833565.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
gi|312210113|emb|CBX90200.1| similar to proteasome subunit beta type-1-A [Leptosphaeria maculans
JN3]
Length = 264
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL-----PNQTA---VGISG 60
Y +GG+ + IAG DFA++A DTRS+S I + K+F++ N+ A + + G
Sbjct: 37 YTDNGGSTLGIAGQDFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDNKDARIVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 97 FAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAILAGLDEE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G ++ ++
Sbjct: 157 GKGALYSYDPVGSYEREQCRAAGAASSLIM 186
>gi|299743502|ref|XP_001835816.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
gi|298405683|gb|EAU85881.2| proteasome subunit [Coprinopsis cinerea okayama7#130]
Length = 253
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GGT++A+AG DF +IA DTR S I + K+F+L ++ + ++G AD
Sbjct: 17 YTENGGTILAVAGADFTVIAGDTRQSEGYNIQTRYAPKVFKLTDKAVLAVNGFAADGNMF 76
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
V +++ E R A AK P+ A ++ +LY RR FPYYV +L GI+ G G VY
Sbjct: 77 VKKVKQRLEWYRHAHAKDMPIR--SIARLIQTMLYARRFFPYYVYNILGGIEEDGTGAVY 134
Query: 127 SYDPVGHCEKVAYRLHGTS 145
S+DPVG E+ R G +
Sbjct: 135 SFDPVGSYERETCRAAGAA 153
>gi|340517495|gb|EGR47739.1| proteosome beta subunit protease [Trichoderma reesei QM6a]
Length = 264
Score = 102 bits (253), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ +AI+G DF ++A DTR +S +I S K+F++ TA + + G
Sbjct: 37 YSDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGTTATQEDATIVLSVCG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL G+P+SL A+ LS +LY++R FPYY +L G+D
Sbjct: 97 FAADGEALRDRLDTVCKIYRYRHGKPMSLNACAKRLSTILYQKRFFPYYTHAMLGGLDEE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG VYSYDPVG E+ R G + ++
Sbjct: 157 GKGAVYSYDPVGSYEREQCRAGGAAGSLIM 186
>gi|345560620|gb|EGX43745.1| hypothetical protein AOL_s00215g481 [Arthrobotrys oligospora ATCC
24927]
Length = 266
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y ++GG ++ IAG D+ +IA DTRSS +I + K++ + + +G+ G AD E+
Sbjct: 30 YTENGGCILGIAGKDYVIIAGDTRSSEGYSINTRTARKVYDIGSGLILGVVGMSADGEEL 89
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V ++ +I+ + +++ A MLS +LY++R FPYY Q LL G+D G G +YSY
Sbjct: 90 VRKVARKIDDYKRNHDKHITVAAAAVMLSRILYQKRFFPYYCQPLLGGLDEEGVGAIYSY 149
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
D VG E+ R +G +A +
Sbjct: 150 DYVGSFEREQSRAYGAAASLI 170
>gi|154278896|ref|XP_001540261.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
gi|150412204|gb|EDN07591.1| proteasome component C5 [Ajellomyces capsulatus NAm1]
Length = 266
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+ + IAG D+A++A DTRS S I + K+F++ G + G
Sbjct: 37 YTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDECGEGAHLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ L+ +LY +R FPYYV +L G+D
Sbjct: 97 FAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDED 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREYCRAAGAAASLIM 186
>gi|320586233|gb|EFW98912.1| proteasome component [Grosmannia clavigera kw1407]
Length = 265
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VG 57
+ Y +GGT +AIAG DFA++A DTR ++ +I S K+F++ TA +
Sbjct: 35 FDPYTDNGGTTLAIAGADFAIVAGDTRHTAGYSINSRFSPKVFKIGGSTADQHDARIVLS 94
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+ G AD + RL G+P+S+ A+ LS +LY++R FPYY +L G+
Sbjct: 95 VVGFAADGEALKERLDTICKMYRYRHGKPISVNACAKRLSTILYQKRFFPYYTHAILGGL 154
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
D G G +YSYDPVG E+ R G +A +
Sbjct: 155 DEDGIGAIYSYDPVGSYEREQSRAGGAAASLI 186
>gi|346320799|gb|EGX90399.1| proteasome component C5 [Cordyceps militaris CM01]
Length = 262
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AIAG DF++IA DTR +S +I S K+F++ A
Sbjct: 29 EHRFNPYTDNGGSTLAIAGADFSIIAGDTRHTSGYSINSRMAPKVFKIGGTNASQDDATI 88
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL G+P++L A+ LS +LY++R FPYY LL
Sbjct: 89 VLSVCGFAADGDALRDRLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHALL 148
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D G G VYSYDPVG E+ R G +A ++
Sbjct: 149 GGLDEEGVGAVYSYDPVGSYEREQCRAGGAAASLIM 184
>gi|400601377|gb|EJP69020.1| proteasome A-type and B-type [Beauveria bassiana ARSEF 2860]
Length = 262
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ + IAG DF+++A DTR +S +I S K+F++ A
Sbjct: 29 EHRFNPYTDNGGSTLGIAGADFSIMAGDTRHTSGYSINSRMAPKVFKIGGTNASQDDATI 88
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL G+P++L A+ LS +LY++R FPYY LL
Sbjct: 89 VLSVCGFAADGDALRDRLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHALL 148
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG +YSYDPVG E+ R G +A ++
Sbjct: 149 GGLDEEGKGAIYSYDPVGSYEREQCRAGGAAASLIM 184
>gi|366989313|ref|XP_003674424.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
gi|342300287|emb|CCC68046.1| hypothetical protein NCAS_0A14880 [Naumovozyma castellii CBS 4309]
Length = 241
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR +++ +I S + K+F + + +G
Sbjct: 18 EHQFNPYSDNGGTILGIAGEDFAVLAGDTRHTTDYSINSRYEPKVFDCGDNIVISANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + + + + L++ A + LLY +R FPYYV ++ G+D G
Sbjct: 78 ADGEALVKRFKNSLKWYHFDHNDKKLAMSSAARNIQHLLYGKRFFPYYVHTIIAGLDEEG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIM 166
>gi|195173300|ref|XP_002027430.1| GL20944 [Drosophila persimilis]
gi|194113282|gb|EDW35325.1| GL20944 [Drosophila persimilis]
Length = 224
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF +I DTR SS I+S Q K+ L Q V +G D++ +
Sbjct: 10 YENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATGCWCDAVSL 69
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ L+ + + +S+ A+MLS++ Y+RR PY V +L GID G+G V+SY
Sbjct: 70 TNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAVFSY 129
Query: 129 DPVGHCEKVAYRLHGTS 145
D +GH + + R+ GT+
Sbjct: 130 DCIGHFVRESSRVEGTA 146
>gi|399219027|emb|CCF75914.1| unnamed protein product [Babesia microti strain RI]
Length = 214
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 85/141 (60%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGTV+A A DFA++ +DTR S +I S K+ RL ++ +G +G AD++ +
Sbjct: 7 YVNNGGTVIAAAKDDFAVLVADTRLSVGYSIHSRRVSKVTRLTDRIIIGTAGMNADTIAL 66
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+L+A++ + + +++LS++LY +R FPYY LLVGID G+ V++Y
Sbjct: 67 HKQLEAQVTIYQNKHHENPDIHCISQLLSVILYGKRFFPYYTFNLLVGIDMKGQAYVFTY 126
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
D +G+ E AY HGT + +
Sbjct: 127 DAIGNFESTAYSAHGTGSNLI 147
>gi|452837570|gb|EME39512.1| hypothetical protein DOTSEDRAFT_180093 [Dothistroma septosporum
NZE10]
Length = 263
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 96/179 (53%), Gaps = 9/179 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLP--------NQTAVGISG 60
Y +GG+ + I+G DF ++A DTRS+S I + + K+F++ ++ + + G
Sbjct: 36 YTDNGGSTLGISGTDFTVLAGDTRSTSGYNINTRYEPKLFKIGGDGPENVGSKIVLSVVG 95
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+ +S+ A+ LS +LY +R FPYYV +L GID
Sbjct: 96 FAADGKALKERLDTVVKMYKYQHGKDISVHACAQRLSHILYSKRFFPYYVTAILGGIDEE 155
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTP 179
GKG +YSYDPVG E+ A R G ++ ++ + ++ ++++D T E+L P
Sbjct: 156 GKGALYSYDPVGSYEREATRAAGAASSLIMPFLDNQVN-LKNQYDPTQAQGFGKEQLVP 213
>gi|322698009|gb|EFY89783.1| proteasome component C5 [Metarhizium acridum CQMa 102]
Length = 263
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ + IAG DF ++A DTR +S +I S K+F++ TA
Sbjct: 30 EHRFNPYTDNGGSTLGIAGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGSTASQDDATI 89
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + +L G+P++L A+ LS +LY++R FPYYV +L
Sbjct: 90 VLSVCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVTAML 149
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG VYSYDPVG E+ R G + ++
Sbjct: 150 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIM 185
>gi|225680770|gb|EEH19054.1| proteasome subunit beta type-1-A [Paracoccidioides brasiliensis
Pb03]
gi|226292463|gb|EEH47883.1| proteasome component C5 [Paracoccidioides brasiliensis Pb18]
Length = 266
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPN--------QTAVGISG 60
Y +GG+ + IAG D+A++A DTRS + +I + K+F++ + + G
Sbjct: 37 YTDNGGSTLGIAGEDYAILAGDTRSVTGYSINTRYSPKLFKIGEDGEGGEGAHLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ LS +LY +R FPYYV +L GID
Sbjct: 97 FAADGRALKERLDAVVKMYKYKHGKPMSVKACAQRLSTILYSKRFFPYYVHAILGGIDED 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+G +YSYDPVG E+ R G +A ++
Sbjct: 157 GRGALYSYDPVGSYEREYCRAAGAAASLIM 186
>gi|358388877|gb|EHK26470.1| hypothetical protein TRIVIDRAFT_36186 [Trichoderma virens Gv29-8]
Length = 264
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AI+G DF ++A DTR +S +I S K+F++ TA
Sbjct: 31 EHRFNPYSDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGTTATQEDATI 90
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL G+P++L A+ LS +LY++R FPYY +L
Sbjct: 91 VLSVCGFAADGEALRDRLDTVCKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYTHAML 150
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG VYSYDPVG E+ R G + ++
Sbjct: 151 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIM 186
>gi|444321340|ref|XP_004181326.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
gi|387514370|emb|CCH61807.1| hypothetical protein TBLA_0F02680 [Tetrapisispora blattae CBS 6284]
Length = 241
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++ IAG DFA++A DTR+ ++ +I S + K+F + + +G AD +
Sbjct: 24 YSDNGGTILGIAGEDFAVLAGDTRNITDYSINSRFEPKVFDCGDNIVISANGFAADGEAL 83
Query: 69 VSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
V R + I + + L++ A + LLY +R FPYYV ++ G+D GKG VYS
Sbjct: 84 VQRFKNSIKWYHFDHNDKKLTMKSAARNIQHLLYGKRFFPYYVHTIIAGLDEEGKGAVYS 143
Query: 128 YDPVGHCEKVAYRLHGTSAKFML 150
+DPVG E+ R G +A ++
Sbjct: 144 FDPVGSYEREQCRAGGAAASLIM 166
>gi|392572662|gb|EIW65807.1| hypothetical protein TREMEDRAFT_46043 [Tremella mesenterica DSM
1558]
Length = 270
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y ++GGT++AIAG DF++IA DTR S +I + K+F+L + + +G
Sbjct: 20 EHRFNPYSENGGTILAIAGADFSVIAGDTRQSEGYSIQTRYARKVFQLTDNAVLATNGFA 79
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD V RL+ + + + L A ++ +LY RR FPYYV +L GI+ G
Sbjct: 80 ADGKNFVRRLKQSLEWYQHNHHKQMGLKAIARLIQTMLYGRRFFPYYVYNILGGIEEDGS 139
Query: 123 GGVYSYDPVGHCEK 136
G VYS+DPVG E+
Sbjct: 140 GAVYSFDPVGSYER 153
>gi|385303180|gb|EIF47271.1| proteasome component c5 [Dekkera bruxellensis AWRI1499]
Length = 243
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR + +I S + K+ + + + +G
Sbjct: 21 EHRFNPYQDNGGTILGIAGEDFAVLAGDTRQTVGYSIDSRYEPKVHNVGDNLLLSANGFS 80
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD +++V Q ++ + +S+ A ++ LLY +R+FPYYV +L G+D GK
Sbjct: 81 ADGVQLVKVFQNQLKWYHFDNNKDMSVDSAARLIQHLLYGKRMFPYYVSTILAGLDKEGK 140
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G +YS+DPVG E+ R G +A ++
Sbjct: 141 GAIYSFDPVGSYEREQCRAGGAAASLIM 168
>gi|145350076|ref|XP_001419449.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579680|gb|ABO97742.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 227
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 82/142 (57%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+A+AG ++ + ASDTR S+ +I++ N K+ ++ +T + +G MAD+ +
Sbjct: 15 YDNNGGTVLAVAGENYVICASDTRMSTGYSILTRNYEKVDQMSPKTLMASAGFMADAQTL 74
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+A + +P+ A+MLS LY RR FPYY ++ G+D GKG V++Y
Sbjct: 75 KKTLKARCKQYEFQNKKPIGCVSFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTY 134
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y G+ ++
Sbjct: 135 DAVGSYERTNYSCQGSGQALIM 156
>gi|253747271|gb|EET02070.1| Proteasome subunit beta type 1 [Giardia intestinalis ATCC 50581]
Length = 220
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ Y +GGT++AIAGPDFA+IA DTR S I+S N K+F + ++ SG AD
Sbjct: 14 FDPYTDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADV 73
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
++ ++ E + +++ +LS ++Y RR FP+Y ++ GID GKG V
Sbjct: 74 QRLIKHMKIESTDYHLKTQREMAIEQFTRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAV 133
Query: 126 YSYDPVGHCEKVAYRLHGT 144
YSYD +G + Y GT
Sbjct: 134 YSYDVIGSTLRTRYGSAGT 152
>gi|149549948|ref|XP_001513174.1| PREDICTED: proteasome subunit beta type-1-like, partial
[Ornithorhynchus anatinus]
Length = 261
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 79/131 (60%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
TV+AIAG DF+++ASDTR S +I S + K ++L ++T +G SG D L + ++A
Sbjct: 1 TVLAIAGEDFSIVASDTRLSEGYSIHSRDNPKCYKLTDRTVIGCSGFHGDCLTLTKIIEA 60
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHC 134
+ + + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS +P+G
Sbjct: 61 RLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSLNPIGSY 120
Query: 135 EKVAYRLHGTS 145
K Y+ GT+
Sbjct: 121 LKDNYKAGGTT 131
>gi|440636579|gb|ELR06498.1| 20S proteasome subunit beta 6 [Geomyces destructans 20631-21]
Length = 266
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 8/153 (5%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VG 57
+ Y +GG+ +AIAG +FA++A DTRS+S I + + K+F++ + +
Sbjct: 36 FDPYTDNGGSTLAIAGDNFAILAGDTRSTSGYNINTRYEPKVFKIGGSGSTQRDATLILS 95
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+ G AD+ + RL + G+ +++ A+ LS++LY++R FPYY +L G+
Sbjct: 96 VVGFAADANALKERLDTVVKLYRYQHGKAMTVKAAAQRLSIILYQKRFFPYYAHAILGGL 155
Query: 118 DGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
D GKG VYSYDPVG E+ R G +A ++
Sbjct: 156 DEEGKGAVYSYDPVGSYEREQCRAGGAAASLIM 188
>gi|116206868|ref|XP_001229243.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88183324|gb|EAQ90792.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 265
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E + Y +GG+ +AIAG F+++A DTR +S +I S + K+F++ TA
Sbjct: 32 EHRFDPYTDNGGSTLAIAGAKFSILAGDTRLTSGYSINSRHHPKLFKIGGTTADQKDATM 91
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL G+P+S+ A+ LS +LY++R FPYY +L
Sbjct: 92 VLSVVGFAADGEALKERLDTICKMYRYRHGKPMSVKACAQRLSTILYQKRFFPYYSHAIL 151
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D G G VYSYDPVG E+ R G +A ++
Sbjct: 152 GGLDEEGNGAVYSYDPVGSYEREQCRAGGAAASLIM 187
>gi|451848862|gb|EMD62167.1| hypothetical protein COCSADRAFT_38952 [Cochliobolus sativus ND90Pr]
Length = 264
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ + I+G DFA++A DTRS+S I + K+F++ + + + + G
Sbjct: 37 YTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDSKGARIVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD+ + RL + G+P+++ A+ LS +LY +R FPYYV +L G+D
Sbjct: 97 FAADAHALKERLDTIVKMYKYQHGKPMTVSACAQRLSHILYNKRFFPYYVHAILGGLDED 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|308159821|gb|EFO62339.1| Proteasome subunit beta type 1 [Giardia lamblia P15]
Length = 214
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ Y +GGT++AIAGPDFA+IA DTR S I+S N K+F + ++ SG AD
Sbjct: 8 FDPYTDNGGTIIAIAGPDFAIIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADV 67
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
++ ++ E + +++ +LS ++Y RR FP+Y ++ GID GKG V
Sbjct: 68 QRLIKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGKGAV 127
Query: 126 YSYDPVGHCEKVAYRLHGT 144
YSYD +G + Y GT
Sbjct: 128 YSYDVIGSTLRTRYGSAGT 146
>gi|401626713|gb|EJS44638.1| pre7p [Saccharomyces arboricola H-6]
Length = 241
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR+ ++ +I S + K+F + + +G
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + + + + LS+ A + LLY +R FPYYV ++ G+D G
Sbjct: 78 ADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIM 166
>gi|401838704|gb|EJT42186.1| PRE7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 241
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR+ ++ +I S + K+F + + +G
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNLVMSANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + + + + LS+ A + LLY +R FPYYV ++ G+D G
Sbjct: 78 ADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDENG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIM 166
>gi|358395926|gb|EHK45313.1| hypothetical protein TRIATDRAFT_131680 [Trichoderma atroviride IMI
206040]
Length = 263
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AI+G DF ++A DTR +S +I S K+F++ TA
Sbjct: 30 EHAFNPYTDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMSPKVFKIGGTTASQDDATI 89
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL G+P+SL A+ LS +LY++R FPYY +L
Sbjct: 90 VLSVCGFAADGEALRDRLDTICKIYRYRHGKPMSLNACAKRLSTILYQKRFFPYYTHAML 149
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D G G VYSYDPVG E+ R G + ++
Sbjct: 150 GGLDEEGTGAVYSYDPVGSYEREQCRAGGAAGSLIM 185
>gi|310793289|gb|EFQ28750.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 263
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 8/149 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ +AIAG DFA++A DTRS+S +I S K+F++ T+ + + G
Sbjct: 36 YTDNGGSTLAIAGADFAIMAGDTRSTSGYSINSRYTPKVFKIGGTTSTQEDATILLSVVG 95
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL G+P+S+ A+ LS +LY++R FPYYV +L G+D
Sbjct: 96 FAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYAILGGLDEE 155
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G G V+SYDPVG E+ R G +A +
Sbjct: 156 GVGAVFSYDPVGSYEREQSRAGGAAASLI 184
>gi|328849593|gb|EGF98770.1| hypothetical protein MELLADRAFT_73512 [Melampsora larici-populina
98AG31]
Length = 239
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AI+ FA+IA DTR S +I S K+ +L +Q + ++G AD+ E+
Sbjct: 10 YTDNGGTILAISSKSFAVIAGDTRQSEGYSIQSRYAPKVTQLTDQCCIAVNGFAADAKEL 69
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V +++ + SL A ++ +LY RR FPYY V+L GID G G VYS+
Sbjct: 70 VKQIKQRLVWYNHTHSSMPSLQSIARLIQTMLYGRRFFPYYAYVILAGIDRDGTGAVYSF 129
Query: 129 DPVGHCEKVAYRLHGTS 145
DPVG E+ + R G +
Sbjct: 130 DPVGSYERESCRAAGAA 146
>gi|255720859|ref|XP_002545364.1| proteasome component C5 [Candida tropicalis MYA-3404]
gi|240135853|gb|EER35406.1| proteasome component C5 [Candida tropicalis MYA-3404]
Length = 245
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR + +I S + K+ + + + +G
Sbjct: 22 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVTGYSIQSRYEPKVHDVGDDILMTANGFA 81
Query: 63 ADSLEVVSRL-QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + ++ R Q+ I + G+ L++ A + LLY +R FP+YV L+ G+D G
Sbjct: 82 ADGVALIDRFKQSLIWYKFDNGGKKLTIKSAARYIQHLLYGKRFFPFYVSTLIAGLDEEG 141
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 142 KGAVYSYDPVGSYEREQCRAGGAAASLIM 170
>gi|242786404|ref|XP_002480798.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
10500]
gi|218720945|gb|EED20364.1| proteasome component Prs3, putative [Talaromyces stipitatus ATCC
10500]
Length = 253
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG----- 57
E Y +GG+ + IAG DF ++A DTRS+S I S K+F++ G
Sbjct: 20 EHSFNPYTDNGGSTLGIAGSDFCILAGDTRSTSGYNINSRYAPKVFKIGGDDETGEGAHI 79
Query: 58 ---ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ G AD + RL + + G+P+S+ A+ LS +LY +R FPYY +L
Sbjct: 80 VLSVVGFAADGQALKERLDSIVKVYRYQHGKPISVKACAQRLSTILYSKRFFPYYAHAIL 139
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G+D G+G +YSYDPVG E+ R G ++ ++ + ++ +++++ AL
Sbjct: 140 GGLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVN-FKNQYIPGSGEGHAL 198
Query: 175 EELTPV 180
E TP
Sbjct: 199 ERRTPA 204
>gi|451998685|gb|EMD91149.1| hypothetical protein COCHEDRAFT_90180 [Cochliobolus heterostrophus
C5]
Length = 264
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 84/150 (56%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ + I+G DFA++A DTRS+S I + K+F++ + + + + G
Sbjct: 37 YTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGSDNKGARIVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD+ + RL + G+P+++ A+ LS +LY +R FPYYV +L G+D
Sbjct: 97 FAADAHALKERLDTIVKMYKYQHGKPMTVSACAQRLSHILYNKRFFPYYVHAILGGLDED 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|6319430|ref|NP_009512.1| proteasome core particle subunit beta 6 [Saccharomyces cerevisiae
S288c]
gi|130882|sp|P23724.1|PSB6_YEAST RecName: Full=Proteasome subunit beta type-6; AltName:
Full=Multicatalytic endopeptidase complex subunit C5;
AltName: Full=Proteasome component C5; Flags: Precursor
gi|11514003|pdb|1G0U|L Chain L, A Gated Channel Into The Proteasome Core Particle
gi|11514017|pdb|1G0U|Z Chain Z, A Gated Channel Into The Proteasome Core Particle
gi|178847471|pdb|2ZCY|L Chain L, Yeast 20s Proteasome:syringolin A-Complex
gi|178847485|pdb|2ZCY|Z Chain Z, Yeast 20s Proteasome:syringolin A-Complex
gi|178847513|pdb|3BDM|L Chain L, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847527|pdb|3BDM|Z Chain Z, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462947|pdb|3NZJ|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462961|pdb|3NZJ|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462975|pdb|3NZW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462989|pdb|3NZW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463003|pdb|3NZX|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463017|pdb|3NZX|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361183|pdb|3MG6|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361197|pdb|3MG6|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361211|pdb|3MG7|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361225|pdb|3MG7|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361239|pdb|3MG8|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361253|pdb|3MG8|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|403071959|pdb|4B4T|6 Chain 6, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|171468|gb|AAA68908.1| proteasome subunit [Saccharomyces cerevisiae]
gi|218467|dbj|BAA00725.1| proteasome subunit [Saccharomyces cerevisiae]
gi|463267|emb|CAA55053.1| YBL0407 [Saccharomyces cerevisiae]
gi|536057|emb|CAA84861.1| PRE7 [Saccharomyces cerevisiae]
gi|45270814|gb|AAS56788.1| YBL041W [Saccharomyces cerevisiae]
gi|151946352|gb|EDN64574.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|207347858|gb|EDZ73901.1| YBL041Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272740|gb|EEU07713.1| Pre7p [Saccharomyces cerevisiae JAY291]
gi|259144804|emb|CAY77743.1| Pre7p [Saccharomyces cerevisiae EC1118]
gi|285810292|tpg|DAA07077.1| TPA: proteasome core particle subunit beta 6 [Saccharomyces
cerevisiae S288c]
gi|323306044|gb|EGA59778.1| Pre7p [Saccharomyces cerevisiae FostersB]
gi|323338788|gb|EGA80003.1| Pre7p [Saccharomyces cerevisiae Vin13]
gi|323349870|gb|EGA84083.1| Pre7p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356250|gb|EGA88054.1| Pre7p [Saccharomyces cerevisiae VL3]
gi|349576338|dbj|GAA21509.1| K7_Pre7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365767035|gb|EHN08523.1| Pre7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301173|gb|EIW12262.1| Pre7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 241
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR+ ++ +I S + K+F + + +G
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +V R + + + + LS+ A + LLY +R FPYYV ++ G+D G
Sbjct: 78 ADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G +A ++
Sbjct: 138 KGAVYSFDPVGSYEREQCRAGGAAASLIM 166
>gi|240273184|gb|EER36706.1| proteasome component [Ajellomyces capsulatus H143]
gi|325089210|gb|EGC42520.1| proteasome component [Ajellomyces capsulatus H88]
Length = 266
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPN--------QTAVGISG 60
Y +GG+ + IAG D+A++A DTRS S I + K+F++ + + G
Sbjct: 37 YTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDEGGEGAHLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ L+ +LY +R FPYYV +L G+D
Sbjct: 97 FAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDED 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREYCRAAGAAASLIM 186
>gi|225554384|gb|EEH02683.1| proteasome component C5 [Ajellomyces capsulatus G186AR]
Length = 266
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPN--------QTAVGISG 60
Y +GG+ + IAG D+A++A DTRS S I + K+F++ + + G
Sbjct: 37 YTDNGGSTLGIAGKDYAILAGDTRSVSGYNINTRYAPKLFKIGEGDEGGEGAHLVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL A + G+P+S+ A+ L+ +LY +R FPYYV +L G+D
Sbjct: 97 FAADGRALKERLDAIVKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMDED 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREYCRAAGAAASLIM 186
>gi|218201500|gb|EEC83927.1| hypothetical protein OsI_30000 [Oryza sativa Indica Group]
Length = 219
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A E Y +GGT +A+AG D+ ++A+DTR S +I+S + KI L ++ + SG
Sbjct: 2 ARFEAYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQG 61
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D + L A+ + +S P A++LS LY +R FPYY +L G+D GKG
Sbjct: 62 DVKALQRNLAAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKG 121
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFML 150
V++YD VG E+ Y GT A M+
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGAALMM 148
>gi|390365759|ref|XP_001177076.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 201
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 76/133 (57%)
Query: 17 MAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEI 76
MA+AG D+A+IASDTR S +I + + K ++L + T +G +G D L + L A +
Sbjct: 1 MAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYQLTDGTVLGCAGFHGDVLTLTKVLTARL 60
Query: 77 NRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEK 136
+ + A MLS +LY RR FPYY +L G+D GKG VYS+DPVG E+
Sbjct: 61 KMXEHEHHKKMFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSFDPVGSYER 120
Query: 137 VAYRLHGTSAKFM 149
YR G+S+ +
Sbjct: 121 ETYRAAGSSSALL 133
>gi|341897234|gb|EGT53169.1| CBN-PBS-6 protein [Caenorhabditis brenneri]
Length = 258
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y GG+ AIAG +FA++ASDTR + N I++ + KI L + + SG D ++
Sbjct: 47 YSMEGGSTCAIAGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIVLTTSGFYGDVIQ 106
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ LQ+ +++ +S+ AE+L+ LY RR FPYY +L GID GKG V+S
Sbjct: 107 LKKVLQSRLHKYRFDYRADMSVDLCAELLARNLYYRRFFPYYTGAILAGIDENGKGAVFS 166
Query: 128 YDPVGHCEKVAYRLHGTS 145
YDP+G E++AY G +
Sbjct: 167 YDPIGCIERIAYSASGAA 184
>gi|198463833|ref|XP_002135596.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
gi|198151431|gb|EDY74223.1| GA28639 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF +I DTR SS I+S Q K+ L Q V +G D++ +
Sbjct: 10 YENNGGTVLAIAGKDFVVIGGDTRLSSGCAILSRTQTKLCPLSKQMVVAATGCGCDAVSL 69
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ L+ + + +S+ A+MLS++ Y+RR PY V +L GID G+G V+SY
Sbjct: 70 TNLLKVKQQGYENQHHKVMSIESMAQMLSVVQYQRRHLPYNVSPILGGIDQDGQGAVFSY 129
Query: 129 DPVGHCEKVAYRLHGTS 145
D +GH + + R+ GT+
Sbjct: 130 DCIGHFVRESSRVEGTA 146
>gi|260941638|ref|XP_002614985.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851408|gb|EEQ40872.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 241
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR S I S + KIF + + + +G
Sbjct: 18 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRIVSGYNIDSRYEPKIFDVGDNIVMTANGFA 77
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD ++ + ++ + + L++ A + LLY +R FPYYV L+ G+D G
Sbjct: 78 ADGAALIDQFRSSFKWYKFDHNNKKLTIRSAARYIQHLLYGKRFFPYYVSTLIAGLDEEG 137
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 138 KGAVYSYDPVGSYEREQCRAGGAAASLIM 166
>gi|159118134|ref|XP_001709286.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
gi|157437402|gb|EDO81612.1| Proteasome subunit beta type 1 [Giardia lamblia ATCC 50803]
Length = 254
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 78/139 (56%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ Y+ +GGT++AIAGPDFA+IA DTR S I+S N K+F + ++ SG AD
Sbjct: 48 FDPYIDNGGTIIAIAGPDFAMIAGDTRLSEGYNILSRNVRKVFPVTDKIVYAASGMHADV 107
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
++ ++ E + +++ +LS ++Y RR FP+Y ++ GID G+G V
Sbjct: 108 QRLLKHMKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDSEGRGAV 167
Query: 126 YSYDPVGHCEKVAYRLHGT 144
YSYD +G + Y GT
Sbjct: 168 YSYDVIGSTLRTRYGSAGT 186
>gi|302412397|ref|XP_003004031.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
gi|261356607|gb|EEY19035.1| proteasome component C5 [Verticillium albo-atrum VaMs.102]
Length = 264
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 8/155 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AIAG DFA++A DTRS+S +I S K++++ T+
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFAIVAGDTRSTSGYSINSRYSPKVYKIGGTTSNQDDATI 90
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL A G+ +S+ A+ LS +LY++R FPYYV +L
Sbjct: 91 LLSVVGFAADGEALKERLDAICKIYRHRHGKAMSVTACAKRLSTILYQKRFFPYYVYAIL 150
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G+D G G V+SYDPVG E+ R G +A +
Sbjct: 151 GGLDEKGVGAVFSYDPVGSYEREQSRAGGAAASLI 185
>gi|190348096|gb|EDK40488.2| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I + + ++F + + + +G
Sbjct: 19 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVVGYSINTRYEPRVFDVGDNIVMTANGFD 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD ++ R + + + G+ LS+ A + LLY +R FPYYV L+ G+D G
Sbjct: 79 ADGAALIDRFRNSLKWYKFDHNGKRLSISSAARYIQHLLYGKRFFPYYVSTLIAGLDDEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
+G VYSYDPVG E+ R G +A ++
Sbjct: 139 RGAVYSYDPVGSYEREQCRAGGAAASLIM 167
>gi|322708662|gb|EFZ00239.1| proteasome component C5 [Metarhizium anisopliae ARSEF 23]
Length = 263
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ + IAG DF ++A DTR +S +I S K+F++ T+
Sbjct: 30 EHRFNPYTDNGGSTLGIAGADFTIMAGDTRHTSGYSINSRMAPKVFKIGGSTSSQDDATI 89
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + +L G+P++L A+ LS +LY++R FPYYV +L
Sbjct: 90 VLSVCGFAADGTALRDQLDTICKIYRYRHGKPMTLNACAKRLSTILYQKRFFPYYVTAML 149
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG VYSYDPVG E+ R G + ++
Sbjct: 150 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIM 185
>gi|115477445|ref|NP_001062318.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|42407968|dbj|BAD09106.1| putative proteasome subunit beta type 1 [Oryza sativa Japonica
Group]
gi|113624287|dbj|BAF24232.1| Os08g0529100 [Oryza sativa Japonica Group]
gi|215678609|dbj|BAG92264.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640910|gb|EEE69042.1| hypothetical protein OsJ_28037 [Oryza sativa Japonica Group]
Length = 219
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 80/147 (54%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A E Y +GGT +A+AG D+ ++A+DTR S +I+S + KI L ++ + SG
Sbjct: 2 ARFEVYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDSSKIAHLADKCVLASSGFQG 61
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D + L A+ + +S P A++LS LY +R FPYY +L G+D GKG
Sbjct: 62 DVKALQRNLTAKELLYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKG 121
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFML 150
V++YD VG E+ Y GT A M+
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGAALMM 148
>gi|298711428|emb|CBJ32569.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 251
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 85/155 (54%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT +AIAG D+ ++A+DTR S+ +I+S +Q K+ +L ++ + +G
Sbjct: 38 ERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCK 97
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D + L + + ++ P A+ML+ LY RR FPYY +L G+D GK
Sbjct: 98 TDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGK 157
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLL 157
G V+SYD +G E+V Y G+ +++ + L+
Sbjct: 158 GSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLV 192
>gi|429856646|gb|ELA31546.1| proteasome component c5 [Colletotrichum gloeosporioides Nara gc5]
Length = 264
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 8/155 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AIAG D+A++A DTRS+S +I S K+F++ T+
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADYAIMAGDTRSTSGYSINSRYTPKVFKIGGTTSSQEDATI 90
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL G+P+S+ A+ LS +LY++R FPYYV +L
Sbjct: 91 LLSVVGFAADGEALKDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYAIL 150
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G+D G G V+SYDPVG E+ R G +A +
Sbjct: 151 GGLDEDGVGAVFSYDPVGSYEREQSRAGGAAASLI 185
>gi|325184015|emb|CCA18472.1| proteasome subunit beta putative [Albugo laibachii Nc14]
Length = 247
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 87/158 (55%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
A E Y +GGT +AIAGPD+ +IA D+R S+ +I+S N+ K+ +L + + + G+
Sbjct: 34 RAAWEPYDFNGGTALAIAGPDYVVIAGDSRLSTGYSILSRNEKKLQQLTSTSVLASPGSH 93
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D +++ LQ +I +S +++L LY RR FPYY +L GID GK
Sbjct: 94 NDVIQLRGMLQLQIQMYMHDNQAIISTENLSQVLMNTLYSRRFFPYYAFCVLAGIDKDGK 153
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPY 160
G VYSYD +G ++V+ G+ M+ + L+ Y
Sbjct: 154 GAVYSYDAIGSYDRVSRGAVGSGGHLMIPLLDNLVEHY 191
>gi|403171610|ref|XP_003330811.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169259|gb|EFP86392.2| 20S proteasome subunit beta 6 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 255
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 77/138 (55%)
Query: 8 HYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
H +GGT++AI+ +FA+IA DTR S +I + K+ +L + + ++G AD E
Sbjct: 25 HIPDNGGTILAISSKEFAVIAGDTRQSEGYSIQTRYAPKVTQLTEECCIAVNGFAADGKE 84
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+V +L+ + S+ A ++ +LY RR FPYY V+L GID G G VYS
Sbjct: 85 LVKQLKQRLQWYQHTHASQPSVQSIARLVQTMLYGRRFFPYYAYVILAGIDRDGTGAVYS 144
Query: 128 YDPVGHCEKVAYRLHGTS 145
+DPVG E+ + R G +
Sbjct: 145 FDPVGSYERESCRAAGAA 162
>gi|3114281|pdb|1RYP|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114295|pdb|1RYP|1 Chain 1, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513424|pdb|1G65|L Chain L, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513438|pdb|1G65|Z Chain Z, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|14488817|pdb|1FNT|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488831|pdb|1FNT|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150388|pdb|1JD2|L Chain L, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150395|pdb|1JD2|S Chain S, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765711|pdb|1Z7Q|M Chain M, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765725|pdb|1Z7Q|AA Chain a, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279379|pdb|2F16|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279393|pdb|2F16|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032213|pdb|2FAK|L Chain L, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032227|pdb|2FAK|Z Chain Z, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490854|pdb|2GPL|L Chain L, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490868|pdb|2GPL|Z Chain Z, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016378|pdb|3D29|L Chain L, Proteasome Inhibition By Fellutamide B
gi|190016392|pdb|3D29|Z Chain Z, Proteasome Inhibition By Fellutamide B
gi|197725332|pdb|3E47|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725346|pdb|3E47|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939223|pdb|3DY3|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939237|pdb|3DY3|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939251|pdb|3DY4|L Chain L, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939265|pdb|3DY4|Z Chain Z, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828248|pdb|3GPJ|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828262|pdb|3GPJ|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588332|pdb|3GPT|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588346|pdb|3GPT|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588360|pdb|3GPW|L Chain L, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588374|pdb|3GPW|Z Chain Z, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588554|pdb|3HYE|L Chain L, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588568|pdb|3HYE|Z Chain Z, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508234|pdb|1VSY|M Chain M, Proteasome Activator Complex
gi|298508248|pdb|1VSY|1 Chain 1, Proteasome Activator Complex
gi|298508450|pdb|3L5Q|Q Chain Q, Proteasome Activator Complex
gi|298508464|pdb|3L5Q|3 Chain 3, Proteasome Activator Complex
gi|330689392|pdb|3MG4|L Chain L, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689406|pdb|3MG4|Z Chain Z, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361155|pdb|3MG0|L Chain L, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361169|pdb|3MG0|Z Chain Z, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892352|pdb|3OKJ|L Chain L, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892366|pdb|3OKJ|Z Chain Z, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780430|pdb|3OEU|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780444|pdb|3OEU|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780458|pdb|3OEV|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780472|pdb|3OEV|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610683|pdb|3TDD|L Chain L, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610697|pdb|3TDD|Z Chain Z, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545857|pdb|3SHJ|L Chain L, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545871|pdb|3SHJ|Z Chain Z, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792252|pdb|3UN4|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792266|pdb|3UN4|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792286|pdb|3UN8|L Chain L, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792300|pdb|3UN8|Z Chain Z, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980827|pdb|3SDI|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980841|pdb|3SDI|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980855|pdb|3SDK|L Chain L, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980869|pdb|3SDK|Z Chain Z, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550743|pdb|4GK7|L Chain L, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550757|pdb|4GK7|Z Chain Z, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072203|pdb|4G4S|M Chain M, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973871|pdb|4FZC|L Chain L, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973885|pdb|4FZC|Z Chain Z, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973899|pdb|4FZG|L Chain L, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973913|pdb|4FZG|Z Chain Z, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302350|pdb|4INR|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302364|pdb|4INR|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302378|pdb|4INT|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302392|pdb|4INT|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302406|pdb|4INU|L Chain L, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302420|pdb|4INU|Z Chain Z, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 222
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++ IAG DFA++A DTR+ ++ +I S + K+F + + +G AD +
Sbjct: 5 YGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDAL 64
Query: 69 VSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
V R + + + + LS+ A + LLY +R FPYYV ++ G+D GKG VYS
Sbjct: 65 VKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYS 124
Query: 128 YDPVGHCEKVAYRLHGTSAKFML 150
+DPVG E+ R G +A ++
Sbjct: 125 FDPVGSYEREQCRAGGAAASLIM 147
>gi|346975013|gb|EGY18465.1| proteasome component C5 [Verticillium dahliae VdLs.17]
Length = 264
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 8/155 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AIAG DFA++A DTRS+S +I S K++++ T+
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFAIVAGDTRSTSGYSINSRYSPKVYKIGGTTSNQDDATI 90
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + RL A G+ +S+ A+ LS +LY++R FPYYV +L
Sbjct: 91 LLSVVGFAADGEALKERLDAICKIYRYRHGKAMSVTACAKRLSTILYQKRFFPYYVYAIL 150
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G+D G G V+SYDPVG E+ R G +A +
Sbjct: 151 GGLDEKGVGAVFSYDPVGSYEREQSRAGGAAASLI 185
>gi|71028614|ref|XP_763950.1| proteasome beat subunit [Theileria parva strain Muguga]
gi|68350904|gb|EAN31667.1| proteasome beat subunit, putative [Theileria parva]
Length = 218
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E YV +GGTV+A ++A+IA+DTR S I + K+F+L ++ +G SG
Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD L + S L+ +I + + A++LS +LY RR FPYY +L GID GK
Sbjct: 65 ADMLALQSVLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G V YD VG+ Y GTS+ +++ + LL+
Sbjct: 125 GVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLN 160
>gi|146415774|ref|XP_001483857.1| hypothetical protein PGUG_04586 [Meyerozyma guilliermondii ATCC
6260]
Length = 242
Score = 99.4 bits (246), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I + + ++F + + + +G
Sbjct: 19 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVVGYSINTRYEPRVFDVGDNIVMTANGFD 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD ++ R + + + G+ LS+ A + LLY +R FPYYV L+ G+D G
Sbjct: 79 ADGAALIDRFRNSLKWYKFDHNGKRLSILSAARYIQHLLYGKRFFPYYVSTLIAGLDDEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
+G VYSYDPVG E+ R G +A ++
Sbjct: 139 RGAVYSYDPVGSYEREQCRAGGAAASLIM 167
>gi|67526071|ref|XP_661097.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
gi|40739864|gb|EAA59054.1| hypothetical protein AN3493.2 [Aspergillus nidulans FGSC A4]
gi|259481995|tpe|CBF76042.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 215
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPN----QTAVGISGNMAD 64
Y +GG + ++GPDFA++A DTRS++ I + + K+F + + + + G AD
Sbjct: 10 YTSNGGATLGVSGPDFAILAGDTRSTAGYNINTRYEPKVFTIQDARDRSIVISVIGFAAD 69
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ RL A + G+ + L A+ +S +LYE+R FPY +Q ++ GID G+G
Sbjct: 70 GRALKERLDAIVAMYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDADGQGA 129
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFML 150
+Y YDP G EK ++ G ++ ML
Sbjct: 130 IYYYDPAGCIEKRSHCAAGEASSLML 155
>gi|409040369|gb|EKM49857.1| hypothetical protein PHACADRAFT_265596 [Phanerochaete carnosa
HHB-10118-sp]
Length = 252
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 97/188 (51%), Gaps = 14/188 (7%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y ++GGT++AIAG DF+++A DTR S +I + K+ +L ++ + ++G
Sbjct: 11 ERQFNPYTENGGTILAIAGADFSVVAGDTRQSEGYSIQTRYAPKVHKLTDRAVLAVNGFA 70
Query: 63 ADSLEVVSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD V +++ E R A AK PL A ++ +LY +R FPYYV +L GI+
Sbjct: 71 ADGNMFVKKVKQRLEWYRHAHAKDMPLR--AIARLIQTMLYGQRFFPYYVYNILGGIEED 128
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFM---LASMSYLL-------SPYESEFDYTDVI 170
G G +YS+DPVG E+ R G + + L + Y SP+ DV+
Sbjct: 129 GTGAIYSFDPVGSYERETCRAAGAAMALVQPFLDNQIYFKNQQAPADSPHPVHLPLQDVL 188
Query: 171 TMALEELT 178
++ ++ T
Sbjct: 189 SIVIDSFT 196
>gi|242082111|ref|XP_002445824.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
gi|241942174|gb|EES15319.1| hypothetical protein SORBIDRAFT_07g026360 [Sorghum bicolor]
Length = 219
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A + Y +GGT +A+AG D+ ++A+DTR S +I+S + KI +L ++ + SG
Sbjct: 2 ARFDPYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRDHSKIAQLADKCVLASSGFQG 61
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D + L A+ + +S P A++LS LY +R FPYY +L G+D GKG
Sbjct: 62 DIKALQKALTAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKG 121
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFML 150
V++YD VG E+ Y GT + M+
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGSALMM 148
>gi|116780814|gb|ABK21828.1| unknown [Picea sitchensis]
gi|116783100|gb|ABK22793.1| unknown [Picea sitchensis]
gi|224284319|gb|ACN39895.1| unknown [Picea sitchensis]
gi|224285431|gb|ACN40438.1| unknown [Picea sitchensis]
Length = 229
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 2 TEAMLEH------YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA 55
TE + +H Y +GGT +AIAG ++ +IA+DTR S+ +I++ + KI L ++
Sbjct: 4 TEGIKQHHSTWSPYDNNGGTCIAIAGSNYCVIAADTRMSTGYSILTRDYSKICNLADKCV 63
Query: 56 VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV 115
+ SG AD + L A + +S P A++LS LY +R FPYY +L
Sbjct: 64 MASSGFQADVKALQKNLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLG 123
Query: 116 GIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG V++YD VG E+V Y GT M+
Sbjct: 124 GLDNEGKGCVFTYDAVGSYERVGYGAQGTGGTLMM 158
>gi|330914581|ref|XP_003296697.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
gi|311331038|gb|EFQ95204.1| hypothetical protein PTT_06863 [Pyrenophora teres f. teres 0-1]
Length = 264
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL-----PNQTA---VGISG 60
Y +GG+ + I+G DF ++A DTRS+S I + K+F++ N+ A + + G
Sbjct: 37 YTDNGGSTLGISGADFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARIVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 97 FAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAILGGLDEE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|189193569|ref|XP_001933123.1| proteasome subunit beta type-1 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187978687|gb|EDU45313.1| proteasome subunit beta type-1 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 264
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL-----PNQTA---VGISG 60
Y +GG+ + I+G DF ++A DTRS+S I + K+F++ N+ A + + G
Sbjct: 37 YTDNGGSTLGISGADFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARIVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 97 FAADGDALKERLDTIVKMYKYQHGKPMSVSACAQRLSHILYNKRFFPYYVHAILGGLDEE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|84996531|ref|XP_952987.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65303983|emb|CAI76362.1| proteasome subunit, putative [Theileria annulata]
Length = 199
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 85/156 (54%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E YV +GGTV+A ++A+IA+DTR S I + K+F+L ++ +G SG
Sbjct: 5 EERFNPYVNNGGTVIAATWNNYAVIAADTRLSQRYLIHTRFSTKLFKLTDKCILGTSGMQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD L + S L+ +I + + A++LS +LY RR FPYY +L GID GK
Sbjct: 65 ADMLALQSVLERQIELYRFTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDEQGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G V YD VG+ Y GTS+ +++ + LL+
Sbjct: 125 GVVCGYDAVGNYNYEKYTAQGTSSSLVISVLDNLLN 160
>gi|61612096|gb|AAX47290.1| proteasome beta 1 subunit [Clonorchis sinensis]
Length = 217
Score = 99.0 bits (245), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 2/140 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGT--IVSNNQLKIFRLPNQTAVGISGNMADSL 66
Y +GGTVM I+G DFAL+ASDTR + I S N ++++ N + +G D L
Sbjct: 8 YSANGGTVMGISGDDFALLASDTRLCAEDRYFIYSRNSPHLYKMGNGKVLATTGFHGDVL 67
Query: 67 EVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ L+ + G+ +S A +LS+ LY RR FP+YV +L G+D G+G VY
Sbjct: 68 TLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVSSILGGLDEEGRGAVY 127
Query: 127 SYDPVGHCEKVAYRLHGTSA 146
YDPVG E+V G+S
Sbjct: 128 RYDPVGSFERVKCAAAGSSG 147
>gi|169601780|ref|XP_001794312.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
gi|111067849|gb|EAT88969.1| hypothetical protein SNOG_03764 [Phaeosphaeria nodorum SN15]
Length = 264
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL-----PNQTA---VGISG 60
Y +GG+ + I+G DFA++A DTRS+S I + K+F++ N+ A + + G
Sbjct: 37 YTDNGGSTLGISGADFAILAGDTRSTSGYNINTRYAPKLFKIGGEGPENKGARIVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+P+S+ A+ LS +LY +R FPYYV +L G+D
Sbjct: 97 FAADGDALKERLDTIVKMYKYQHGKPMSVAACAQRLSHILYNKRFFPYYVHAILGGLDEN 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G G +YSYDPVG E+ R G +A ++
Sbjct: 157 GTGALYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|225453909|ref|XP_002279266.1| PREDICTED: proteasome subunit beta type-1 [Vitis vinifera]
gi|296089152|emb|CBI38855.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 8/179 (4%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI +L ++ + SG
Sbjct: 5 QANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICKLADKCVMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L A + +S P A++LS LY +R FPYY +L G+D GK
Sbjct: 65 ADVRALQKHLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASM-SYLLSPYESEFDYTDVITMALEELTPV 180
G V++YD VG EKV Y G+ + ++ + + L SP + ++ AL+ +TP+
Sbjct: 125 GCVFTYDAVGSYEKVGYSSQGSGSTLIMPFLDNQLKSP-------SPLLLPALDAVTPL 176
>gi|339246829|ref|XP_003375048.1| proteasome subunit beta type-1 [Trichinella spiralis]
gi|316971688|gb|EFV55434.1| proteasome subunit beta type-1 [Trichinella spiralis]
Length = 297
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 9/153 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y ++GGT IAG DF +++ DTR S+S+ ++S K++RL + + +G D ++
Sbjct: 88 YTENGGTCAGIAGKDFVILSGDTRLSASSMVVMSRTAPKVYRLTPKVYMTGTGFQGDMIQ 147
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+V L+ I + + + + A++LS LY RR FPYYV ++ GID G+G +YS
Sbjct: 148 LVKVLRTRIQQYLFTFNEYMDIHAAAQLLSRTLYFRRFFPYYVGAIIGGIDRDGRGVLYS 207
Query: 128 YDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPY 160
YDPVG E++ Y G SYL+ P+
Sbjct: 208 YDPVGTIEELPYSAQGEG--------SYLIEPF 232
>gi|255938694|ref|XP_002560117.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584738|emb|CAP74264.1| Pc14g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 259
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM------ 62
Y +GG+ + I G DFA++A DTRS+S I S K+F++ G N+
Sbjct: 32 YTDNGGSTLGITGADFAILAGDTRSTSGYNINSRMVPKVFKIGGDDETGEGANIILSVVG 91
Query: 63 --ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + +L + G+ +S+ A+ LS +LYE+R FPYYV +L G+D
Sbjct: 92 FAADGNALKEKLDTMVRMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHAILAGLDEE 151
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G G +YSYDPVG E+ R G ++ ++
Sbjct: 152 GVGALYSYDPVGSYEREQCRAAGAASSLIM 181
>gi|414869634|tpg|DAA48191.1| TPA: proteasome subunit beta type [Zea mays]
Length = 219
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A Y +GGT +A+AG D+ ++A+DTR S +I+S + KI +L ++ + SG
Sbjct: 2 ARFNPYENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQG 61
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D + L A+ + +S P A++LS LY +R FPYY +L G+D GKG
Sbjct: 62 DIKALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKG 121
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFML 150
V++YD VG E+ Y GT + M+
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGSALMM 148
>gi|308502323|ref|XP_003113346.1| CRE-PBS-6 protein [Caenorhabditis remanei]
gi|308265647|gb|EFP09600.1| CRE-PBS-6 protein [Caenorhabditis remanei]
Length = 258
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y GG+ AI+G +FA++ASDTR + N I++ + KI L + + SG D L+
Sbjct: 47 YSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTTSGFYGDVLQ 106
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ LQ+ +++ +S+ AE+LS LY RR FPYY +L GID GKG V+S
Sbjct: 107 LKKVLQSRLHKYRFDYRADMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGAVFS 166
Query: 128 YDPVGHCEKVAYRLHGTS 145
YDP+G E++ Y G +
Sbjct: 167 YDPIGCIERLTYSASGAA 184
>gi|226533094|ref|NP_001147213.1| proteasome subunit beta type 1 [Zea mays]
gi|195608582|gb|ACG26121.1| proteasome subunit beta type 1 [Zea mays]
Length = 219
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A Y +GGT +A+AG D+ ++A+DTR S +I+S + KI +L ++ + SG
Sbjct: 2 ARFNPYENNGGTCLAVAGADYCVVAADTRLSIGYSILSRDHSKISQLSDKCVLASSGFQG 61
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D + L A+ + +S P A++LS LY +R FPYY +L G+D GKG
Sbjct: 62 DIKALQKALAAKELIYEHNNNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLAGLDTQGKG 121
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFML 150
V++YD VG E+ Y GT + M+
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGSALMM 148
>gi|340054849|emb|CCC49156.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
gi|340054851|emb|CCC49158.1| putative 20S proteasome beta 6 subunit [Trypanosoma vivax Y486]
Length = 258
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVS-NNQLKIFRLPNQTAVGISGN 61
+ M Y +GGTV A+AG D+ ++ DTR + + I S N++ K+F+L + + +G
Sbjct: 42 QPMWSPYKDNGGTVAAVAGKDYVILGGDTRLNGDFCIHSRNDRSKLFQLTDHVFLASTGM 101
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD L++ L+ I G + S A++ S +LY+RR FPYY ++VG+D
Sbjct: 102 QADRLQLQQMLKYRIQWYQYNNGGEVPSTRAIAKLTSTILYQRRFFPYYTFNMIVGLDEK 161
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G G YSYDPVG E Y G+++ F+ M LL+
Sbjct: 162 GAGVCYSYDPVGSTEPFRYGTSGSASSFIEPLMDCLLT 199
>gi|380480528|emb|CCF42385.1| proteasome A-type and B-type [Colletotrichum higginsianum]
Length = 263
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 8/149 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA--------VGISG 60
Y +GG+ +AIAG FA++A DTRS+S +I S K+F++ T+ + + G
Sbjct: 36 YTDNGGSXLAIAGAXFAIVAGDTRSTSGYSINSRYTPKVFKIGGTTSTQEDATIMLSVVG 95
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL G+P+S+ A+ LS +LY++R FPYYV +L G+D
Sbjct: 96 FAADGEALRDRLDTICKIYRYRHGKPMSVTACAKRLSTILYQKRFFPYYVYAILGGLDEE 155
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G G V+SYDPVG E+ R G +A +
Sbjct: 156 GVGAVFSYDPVGSYEREQSRAGGAAASLI 184
>gi|357148563|ref|XP_003574814.1| PREDICTED: proteasome subunit beta type-1-like [Brachypodium
distachyon]
Length = 219
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A + Y +GGT +A+AG D+ ++A+DTR S +I+S KI L ++ + SG
Sbjct: 2 ARFDPYENNGGTCVAVAGADYCVVAADTRLSVGYSILSRAHSKIAHLADKCVLASSGFQG 61
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D + L A+ + +S P A++LS LY +R FPYY +L G+D GKG
Sbjct: 62 DIKALQKNLTAKELVYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKG 121
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFML 150
V++YD VG E+ Y GT A M+
Sbjct: 122 CVFTYDAVGSYERTGYSAQGTGATLMM 148
>gi|255541320|ref|XP_002511724.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223548904|gb|EEF50393.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 223
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 83/148 (56%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI +L ++ + SG
Sbjct: 5 QANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKICQLAEKSVMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L+A+ + +S P ++LS LY +R FPYY +L G+D GK
Sbjct: 65 ADVQALQKHLKAKHLIYQHQHNKQMSCPAMGQLLSNTLYFKRFFPYYAFNVLGGLDSEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G VY+YD VG E+V Y G+ + ++
Sbjct: 125 GCVYTYDAVGSYERVGYSAQGSGSTLIM 152
>gi|10121721|gb|AAG13340.1|AF266220_1 proteasome subunit beta type 1 [Gillichthys mirabilis]
Length = 181
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 11/143 (7%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+A+AG DFA++ASDTR S +I S + K ++L + T +G SG
Sbjct: 11 EHRFSPYAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFH 70
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L + + A + + + ++ A MLS +LY RR FPYYV ++ G+D GK
Sbjct: 71 GDCLTLTKIIDARLKMYKHSNNKMMTCGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGK 130
Query: 123 G-------GVYSYDPVG----HC 134
G G Y DP G HC
Sbjct: 131 GASTALPVGSYQRDPTGWKISHC 153
>gi|425770053|gb|EKV08528.1| hypothetical protein PDIP_68200 [Penicillium digitatum Pd1]
gi|425771744|gb|EKV10181.1| hypothetical protein PDIG_58720 [Penicillium digitatum PHI26]
Length = 259
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG--------ISG 60
Y +GG+ + I G DFA++A DTRS+S I S K+F++ G + G
Sbjct: 32 YTDNGGSTLGITGADFAILAGDTRSTSGYNINSRMVPKVFKIGGDDETGEGATIILSVVG 91
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + +L + G+ +S+ A+ LS +LYE+R FPYYV +L G+D
Sbjct: 92 FAADGNALKEKLDTVVKMYKYQHGKSMSVGACAQRLSTILYEKRFFPYYVHAILAGLDEE 151
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G G +YSYDPVG E+ R G ++ ++
Sbjct: 152 GVGALYSYDPVGSYEREQCRAAGAASSLIM 181
>gi|390364342|ref|XP_001187732.2| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Strongylocentrotus purpuratus]
Length = 229
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT+MA+AG D+A+IASDTR S +I + + K +RL ++ I + +V
Sbjct: 25 YTFNGGTIMAMAGDDYAIIASDTRLSEGFSIHTRDSPKNYRL-XVISIHICSDWPSLTKV 83
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + + +S A MLS +LY RR FPYY +L G+D GKG VYS+
Sbjct: 84 ---LTARLKMYEHEHHKKMSTTAIAAMLSTILYYRRFFPYYTYNILAGLDEEGKGCVYSF 140
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG E+ YR G+S+ +
Sbjct: 141 DPVGSYERETYRAAGSSSALL 161
>gi|302688009|ref|XP_003033684.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
gi|300107379|gb|EFI98781.1| hypothetical protein SCHCODRAFT_66433 [Schizophyllum commune H4-8]
Length = 274
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
T+ Y +GGTV+AIAG DF++IA DTR S I + K+ RL N+ + ++G
Sbjct: 11 TQHSFNPYTDNGGTVLAIAGSDFSVIAGDTRQSEGYNIQTRYAPKVHRLTNKAVLAVTGF 70
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI--DG 119
AD V +L+ + A + + L A ++ +LY RR FP+YV ++L GI DG
Sbjct: 71 AADGNTFVKKLKQRLEWYHHAHAKNMPLQAVARLIQTMLYGRRFFPFYVYIILGGIEEDG 130
Query: 120 T------------------GKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
T G G VYS+DPVG E+ R G + +
Sbjct: 131 TRHRSSRSHTHRPTFFLFPGSGSVYSFDPVGSYERETCRAAGAAQSLL 178
>gi|344229599|gb|EGV61484.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 242
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I S + KIF + + + +G
Sbjct: 19 EHRFNPYSDNGGTVLGIAGKDFAVLAGDTRHVEGYSINSRYEPKIFNVGDDIVMTANGFA 78
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD +++ + ++ + + S+ A + LLY +R FPYYV L+ G+D G
Sbjct: 79 ADGKALINSFKTQLKWYKFDHNDKRFSIQSAARYIRHLLYGKRFFPYYVSTLIAGLDDEG 138
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYS+DPVG E+ R G+++ ++
Sbjct: 139 KGCVYSFDPVGSYEREQCRAGGSASSLIM 167
>gi|348674011|gb|EGZ13830.1| hypothetical protein PHYSODRAFT_286698 [Phytophthora sojae]
Length = 247
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
A E Y +GGTV+AIAG DF ++A DTR S+ +++S + K+ +L + +G G+
Sbjct: 34 RANWEPYDFNGGTVLAIAGEDFVVVAGDTRLSTGYSVLSREESKLHQLTPTSVLGCPGSH 93
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D +++ L +S A++L LY RR FPYY +L GID GK
Sbjct: 94 NDIIQLRGVLSIRAQMYQHDNETAMSSSAMAQLLMNTLYSRRFFPYYAFCILCGIDENGK 153
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G VY+YD +G ++V G+ M+ + L+ +++ D T++L+E ++K
Sbjct: 154 GAVYTYDAIGSYDRVTRAAQGSGGHLMIPLLDNLVE-HDTRTDPKK--TLSLQETKDIIK 210
>gi|46108556|ref|XP_381336.1| hypothetical protein FG01160.1 [Gibberella zeae PH-1]
Length = 264
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AIAG DF ++A DTR +S +I S K+FR+ TA
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATL 90
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + L G+P+S+ A+ LS +LY +R FPYY +L
Sbjct: 91 VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAML 150
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D G+G VYSYDPVG E+ R G + ++
Sbjct: 151 GGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIM 186
>gi|408398080|gb|EKJ77215.1| hypothetical protein FPSE_02589 [Fusarium pseudograminearum CS3096]
Length = 264
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AIAG DF ++A DTR +S +I S K+FR+ TA
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATL 90
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + L G+P+S+ A+ LS +LY +R FPYY +L
Sbjct: 91 VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMSVNACAKRLSTVLYGKRFFPYYSHAML 150
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D G+G VYSYDPVG E+ R G + ++
Sbjct: 151 GGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIM 186
>gi|448530387|ref|XP_003870050.1| Pre7 protein [Candida orthopsilosis Co 90-125]
gi|380354404|emb|CCG23919.1| Pre7 protein [Candida orthopsilosis]
Length = 286
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I S + KI + + + +G
Sbjct: 63 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKIHNVGDNILMTANGFA 122
Query: 63 ADSLEVVSRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + ++ + + G + L + A + LLY +R FPYYV L+ G+D G
Sbjct: 123 ADGVALIDKFKQSFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFPYYVSTLIAGLDEEG 182
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 183 KGAVYSYDPVGSYEREQCRAGGAAASLIM 211
>gi|323445273|gb|EGB01969.1| hypothetical protein AURANDRAFT_9896 [Aureococcus anophagefferens]
Length = 150
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
E Y +GGT +AI+G DFA++A+DTR S+ +I++ K+ +L T + +G D
Sbjct: 1 FEPYDFNGGTTLAISGADFAVVAADTRMSTGYSIMTRKMSKLHQLGPNTVLAAAGCQTDV 60
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+ +V L+ G+ ++ A+ML LY +R FPYY +L G+D GKG V
Sbjct: 61 VCLVDVLKTRQKMYKHQTGKNMTTTSIAQMLGNTLYYKRFFPYYAFNVLAGVDKEGKGCV 120
Query: 126 YSYDPVGHCEKVAYRLHGTSAKFML 150
YSYD +G E+V + G+ +++
Sbjct: 121 YSYDAIGSFERVPFSASGSGQSYII 145
>gi|407420511|gb|EKF38599.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi marinkellei]
Length = 246
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGN 61
E Y +GGT+ AIAG ++ ++ DTR + + I +++ K+F+L T + +G
Sbjct: 30 EQQWSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHTRDDRTKLFQLTEHTFLASTGM 89
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD L++ L+ I G L S A++ S +LY+RR FPYY ++VG+D
Sbjct: 90 QADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEK 149
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G G YSYDPVG E Y G+++ F+ M LL+
Sbjct: 150 GAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLT 187
>gi|407853394|gb|EKG06411.1| proteasome beta 6 subunit, putative,20S proteasome beta 6 subunit,
putative [Trypanosoma cruzi]
Length = 246
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGN 61
E Y +GGT+ AIAG ++ ++ DTR + + I +++ K+F+L T + +G
Sbjct: 30 EQQWSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHTRDDRTKLFQLTEHTFLASTGM 89
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD L++ L+ I G L S A++ S +LY+RR FPYY ++VG+D
Sbjct: 90 QADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEK 149
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G G YSYDPVG E Y G+++ F+ M LL+
Sbjct: 150 GAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLT 187
>gi|342879609|gb|EGU80854.1| hypothetical protein FOXB_08721 [Fusarium oxysporum Fo5176]
Length = 264
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AIAG DF ++A DTR +S +I S K+FR+ TA
Sbjct: 31 EHRFNPYTDNGGSTLAIAGADFTIMAGDTRHTSGYSINSRMSPKVFRIGGTTASQEDATL 90
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + L G+P+++ A+ LS +LY +R FPYY +L
Sbjct: 91 VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYSKRFFPYYSHAML 150
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D G+G VYSYDPVG E+ R G + ++
Sbjct: 151 GGLDEEGRGAVYSYDPVGSYEREQCRAGGAAGSLIM 186
>gi|71655250|ref|XP_816231.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70881343|gb|EAN94380.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGN 61
E Y +GGT+ AIAG ++ ++ DTR + + I +++ K+F+L T + +G
Sbjct: 30 EQQWSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGM 89
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD L++ L+ I G L S A++ S +LY+RR FPYY ++VG+D
Sbjct: 90 QADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEK 149
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G G YSYDPVG E Y G+++ F+ M LL+
Sbjct: 150 GAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLT 187
>gi|197129777|gb|ACH46275.1| putative proteasome subunit beta type 1 [Taeniopygia guttata]
Length = 149
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 3 EAMLEH-----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG 57
EA ++H Y +GGTV+AIAG DF ++ASDTR S +I S + K ++L +T +G
Sbjct: 19 EAPVQHHRFSPYTFNGGTVLAIAGEDFCIVASDTRLSEGYSIHSRDSPKCYKLTERTVIG 78
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
+G D L + ++A + + + ++ A MLS +LY RR FPYYV ++ G+
Sbjct: 79 CTGFHGDCLTLTKIIEARLKMYKHSNNKTMTTGAIAAMLSTILYSRRFFPYYVYNIIGGL 138
Query: 118 DGTGKGGVY 126
D GKG VY
Sbjct: 139 DEEGKGAVY 147
>gi|398395515|ref|XP_003851216.1| proteasome core particle subunit beta 6 [Zymoseptoria tritici
IPO323]
gi|339471095|gb|EGP86192.1| hypothetical protein MYCGRDRAFT_105119 [Zymoseptoria tritici
IPO323]
Length = 264
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL----PNQTA----VGISG 60
Y +GG+ + I+G DF ++A DTRS+S I + K+F++ P+QT + + G
Sbjct: 37 YTDNGGSTLGISGSDFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPDQTGARIVLSVVG 96
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+ + + A+ LS +LY +R FP+YV +L GID
Sbjct: 97 FAADGHALKERLDTVVKMYKYQHGKDMPVHACAQRLSHILYGKRFFPFYVTAILGGIDDE 156
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G +A ++
Sbjct: 157 GKGALYSYDPVGSYEREQCRAAGAAASLIM 186
>gi|71654519|ref|XP_815877.1| proteasome beta 6 subunit [Trypanosoma cruzi strain CL Brener]
gi|70880966|gb|EAN94026.1| proteasome beta 6 subunit, putative [Trypanosoma cruzi]
Length = 246
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 2/158 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGN 61
E Y +GGT+ AIAG ++ ++ DTR + + I +++ K+F+L T + +G
Sbjct: 30 EQQWSPYADNGGTIAAIAGKNYVILGGDTRLNGDFCIHARDDRTKLFQLTEHTFLASTGM 89
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD L++ L+ I G L S A++ S +LY+RR FPYY ++VG+D
Sbjct: 90 QADRLQLQQMLKYRIQWYQYNNGGKLPSTKAIAKLTSTMLYQRRFFPYYTFNMVVGLDEK 149
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G G YSYDPVG E Y G+++ F+ M LL+
Sbjct: 150 GAGVCYSYDPVGSTEPFRYGTSGSASSFVEPLMDCLLT 187
>gi|342182103|emb|CCC91582.1| proteasome beta 6 subunit [Trypanosoma congolense IL3000]
Length = 258
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 87/156 (55%), Gaps = 2/156 (1%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSN-NQLKIFRLPNQTAVGISGNMA 63
M Y +GGT+ AIAG DFA++ +DTR + + I + + K+F+L ++ + SG A
Sbjct: 44 MWSPYTDNGGTIAAIAGRDFAILGADTRLNGDFCIHTRMDTSKLFQLTDRVFLASSGMQA 103
Query: 64 DSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L++ LQ I G+ S A+++S +LY+RR FPYY ++VG+D G
Sbjct: 104 DRLQLQRMLQYRIQWYRYNNGGKTPSTKAIAKLVSTVLYQRRFFPYYTFNMIVGLDEQGA 163
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
G YSYD VG E Y G+++ F+ M LL+
Sbjct: 164 GVCYSYDAVGSTEPSRYGTCGSASSFVEPLMDCLLT 199
>gi|17554384|ref|NP_498806.1| Protein PBS-6 [Caenorhabditis elegans]
gi|21903455|sp|P34286.2|PSB1_CAEEL RecName: Full=Proteasome subunit beta type-1; AltName:
Full=Proteasome subunit beta 6
gi|12276021|gb|AAG50223.1|AF303265_1 proteasome component C5 [Caenorhabditis elegans]
gi|351020646|emb|CCD62635.1| Protein PBS-6 [Caenorhabditis elegans]
Length = 258
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y GG+ AI+G +FA++ASDTR + N I++ + KI L + + SG D L+
Sbjct: 47 YSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQ 106
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ LQ+ +++ +S+ AE+LS LY RR FPYY +L GID GKG V+S
Sbjct: 107 LKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFS 166
Query: 128 YDPVGHCEKVAYRLHGTS 145
YDP+G E++ Y G +
Sbjct: 167 YDPIGCIERLGYSASGAA 184
>gi|600387|emb|CAA47753.1| proteosome subunit [Arabidopsis thaliana]
Length = 230
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ +IA+DTR S+ +I+S + KI +L ++ + SG AD +
Sbjct: 18 YDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKAL 77
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L++ + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 78 QKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTY 137
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 138 DAVGSYERVGYGAQGSGSTLIM 159
>gi|168046657|ref|XP_001775789.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672796|gb|EDQ59328.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 229
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ +IA+DTR S+ +I++ + KI ++ + + SG AD +
Sbjct: 17 YDNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHQITEKCVLASSGFQADVRSL 76
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG VY+Y
Sbjct: 77 QKNLDARHQIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVYTY 136
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y G+ ++
Sbjct: 137 DAVGSYERSGYSSQGSGQTLIM 158
>gi|384253987|gb|EIE27461.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 249
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
Query: 2 TEAMLEH---YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGI 58
T+ LEH Y +GGT +A+AG D+ ++AS TR S+ +I+S + + +L ++ +
Sbjct: 27 TKQKLEHRHMYDNNGGTCVAVAGNDYCIVASSTRLSTGFSILSRDVSMVLKLSDKLMILS 86
Query: 59 SGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
G AD+ + LQ R G+P+S+ A++L LY +R FPYY + G+D
Sbjct: 87 PGFQADAKTLHKVLQQRYIRYQFDHGRPMSVAACAQLLGNTLYYKRFFPYYTFNICAGLD 146
Query: 119 GTGKGGVYSYDPVGHCEKVAYRLHGT 144
GKG VYSYD +G E+ Y + G+
Sbjct: 147 EEGKGAVYSYDAIGSHERSGYAVQGS 172
>gi|79315846|ref|NP_001030905.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646592|gb|AEE80113.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ +IA+DTR S+ +I+S + KI +L ++ + SG AD +
Sbjct: 11 YDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L++ + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 71 QKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTY 130
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 131 DAVGSYERVGYGAQGSGSTLIM 152
>gi|212543349|ref|XP_002151829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
18224]
gi|210066736|gb|EEA20829.1| proteasome component Prs3, putative [Talaromyces marneffei ATCC
18224]
Length = 252
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG----- 57
E Y +GG+ + IAG DF ++A DTRS+S I + K+F++ G
Sbjct: 19 EHSFNPYTDNGGSTLGIAGSDFCILAGDTRSTSGYNINTRYAPKLFKIGGDDETGEGAHI 78
Query: 58 ---ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ G AD + RL + + G+P+++ A+ LS +LY +R FPYY +L
Sbjct: 79 VLSVVGFAADGHALKERLDSIVKVYRYQHGKPITVNACAQRLSTILYSKRFFPYYAYAIL 138
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G+D G+G +YSYDPVG E+ R G ++ ++ + ++ +++++ AL
Sbjct: 139 GGLDEEGRGALYSYDPVGSYEREQCRAAGAASSLIMPFLDNQVN-FKNQYIPESGEGHAL 197
Query: 175 EELTPV 180
E TP
Sbjct: 198 ERRTPA 203
>gi|268570354|ref|XP_002648488.1| C. briggsae CBR-PBS-6 protein [Caenorhabditis briggsae]
Length = 258
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y GG+ AI+G +FA++ASDTR + N I++ + KI L + + SG D ++
Sbjct: 47 YSMEGGSTCAISGENFAIVASDTRMTQNDINILTRDAEKIHVLNDSIILTTSGFYGDVIQ 106
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ LQ+ +++ +S+ AE+LS LY RR FPYY +L GID GKG V+S
Sbjct: 107 LKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVFS 166
Query: 128 YDPVGHCEKVAYRLHGTS 145
YDP+G E++ Y G +
Sbjct: 167 YDPIGCIERLGYSASGAA 184
>gi|351734454|ref|NP_001238324.1| uncharacterized protein LOC100306148 [Glycine max]
gi|255627685|gb|ACU14187.1| unknown [Glycine max]
Length = 223
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI RL + + SG
Sbjct: 5 QANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISRLAEKCVMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L A + +S P A++LS LY +R FPYY +L G+D GK
Sbjct: 65 ADVKALQKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G V++YD VG E+V Y G+ + ++
Sbjct: 125 GCVFTYDAVGSYERVGYSSQGSGSTLIM 152
>gi|15232965|ref|NP_191641.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|334186160|ref|NP_001190146.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|297820934|ref|XP_002878350.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|12643281|sp|P42742.2|PSB1_ARATH RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome beta subunit F-1; AltName: Full=Proteasome
component 5; AltName: Full=Proteasome subunit beta
type-6; AltName: Full=TAS-F22/FAFP98; AltName:
Full=TAS-G39.20
gi|577531|emb|CAA56201.1| proteasome subunit [Arabidopsis thaliana]
gi|3421120|gb|AAC32073.1| 20S proteasome beta subunit PBF1 [Arabidopsis thaliana]
gi|7329692|emb|CAB82686.1| proteasome component C5 [Arabidopsis thaliana]
gi|17065428|gb|AAL32868.1| proteasome component C5 [Arabidopsis thaliana]
gi|20148485|gb|AAM10133.1| proteasome component C5 [Arabidopsis thaliana]
gi|21554745|gb|AAM63678.1| proteasome component C5 [Arabidopsis thaliana]
gi|297324188|gb|EFH54609.1| hypothetical protein ARALYDRAFT_907612 [Arabidopsis lyrata subsp.
lyrata]
gi|332646591|gb|AEE80112.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
gi|332646593|gb|AEE80114.1| proteasome subunit beta type-1 [Arabidopsis thaliana]
Length = 223
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ +IA+DTR S+ +I+S + KI +L ++ + SG AD +
Sbjct: 11 YDNNGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L++ + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 71 QKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTY 130
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 131 DAVGSYERVGYGAQGSGSTLIM 152
>gi|154331019|ref|XP_001561949.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059271|emb|CAM36970.1| putative 20S proteasome beta 6 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 333
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y +GGT AIAG DF L+A DTR + N + +++ KIF+L T + +G AD L+
Sbjct: 123 YQDNGGTTAAIAGNDFVLLAGDTRLNGNFCLHTRHDESKIFQLTPHTYMASNGMQADRLQ 182
Query: 68 VVSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ L+ I G + S A++LS +LY RR FPYY ++VG+D G G Y
Sbjct: 183 LQQLLKYRIKWYQYNNGGKVPSTKSIAQLLSTVLYHRRFFPYYTFNMIVGLDEEGHGVCY 242
Query: 127 SYDPVGHCEKVAYRLHGTSAKFM 149
SYD VG E + Y G++A F+
Sbjct: 243 SYDAVGSTEPLLYGTRGSAASFV 265
>gi|357159246|ref|XP_003578386.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-1-like
[Brachypodium distachyon]
Length = 221
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 76/142 (53%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L + + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICELXRKCVIASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG VYSY
Sbjct: 69 QKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVYSY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + ++
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIM 150
>gi|238881595|gb|EEQ45233.1| proteasome component C5 [Candida albicans WO-1]
Length = 244
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 81/149 (54%), Gaps = 2/149 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I S + KI + + + +G
Sbjct: 22 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGFA 81
Query: 63 ADSLEVVSRL-QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + ++ R Q+ I + G+ L++ A + LLY +R FP YV L+ G+D G
Sbjct: 82 ADGVALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFP-YVSTLIAGLDEEG 140
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 141 KGAVYSYDPVGSYEREQCRAAGAAASLIM 169
>gi|354547791|emb|CCE44526.1| hypothetical protein CPAR2_403290 [Candida parapsilosis]
Length = 244
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I S + KI + + + +G
Sbjct: 21 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPKIHNVGDNILMTANGFA 80
Query: 63 ADSLEVVSRL-QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + ++ + QA + + L + A + LLY +R FPYYV L+ G+D G
Sbjct: 81 ADGVALLDKFKQAFTWYKFDNGNRKLEISSAARYIQHLLYGKRFFPYYVSTLIAGLDEEG 140
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 141 KGAVYSYDPVGSYEREQCRAGGAAASLIM 169
>gi|449432245|ref|XP_004133910.1| PREDICTED: proteasome subunit beta type-1-like [Cucumis sativus]
Length = 223
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 81/147 (55%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI +L ++ + SG
Sbjct: 5 QANWSPYDNNGGSCVAIAGADYCVIAADTRLSTGYNILTRDYSKICKLADKAVLASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L A + +S P A++LS LY +R FPYY +L G+D GK
Sbjct: 65 ADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G V++YD VG E+V Y G+ + +
Sbjct: 125 GCVFTYDAVGSYERVGYSAQGSGSTLI 151
>gi|303278464|ref|XP_003058525.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459685|gb|EEH56980.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+A+AG D+ + A+DTR S+ ++++ + KI ++ + + +G MAD++ +
Sbjct: 8 YDNNGGTVLAVAGEDYVVCAADTRMSTGYSVLTRDYKKIEKMTEKCVMASAGFMADAVTL 67
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+A + + A+MLS LY RR FPYY ++ G+D GKG V++Y
Sbjct: 68 KKTLKARCVSYEFQNNKEMGCVSFAQMLSNTLYYRRFFPYYTFNIVAGLDKEGKGAVFTY 127
Query: 129 DPVGHCEKVAYRLHGT 144
D VG E+ Y G+
Sbjct: 128 DAVGSYERTNYSCQGS 143
>gi|307107838|gb|EFN56080.1| hypothetical protein CHLNCDRAFT_22624 [Chlorella variabilis]
Length = 239
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 80/147 (54%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
A Y +GGTV+A+AG D+ ++A+ TR S+ +I++ N+ KI +L + + +G
Sbjct: 21 HATWSPYDDNGGTVVAVAGDDYCVVAASTRMSTGYSILTRNKSKILQLNPKCVIASAGMQ 80
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L + +P++ P A++LS LY +R FPYY L G+D G+
Sbjct: 81 ADQETLHKVLHSRHVTYQFNHRKPMACPAMAQLLSNTLYYKRFFPYYTFNLCAGLDDEGR 140
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G VY+YD +G E+V Y G + +
Sbjct: 141 GAVYTYDAIGSYERVGYGCQGNGKELV 167
>gi|449704101|gb|EMD44406.1| proteasome beta subunit, putative [Entamoeba histolytica KU27]
Length = 225
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GT + I G DF +IASDTR S + I++ N KI+ L ++ SG AD E+
Sbjct: 23 YEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKEL 82
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+++A I G+ +S A++LS LY R FPYY LL GI+ GK Y+Y
Sbjct: 83 TDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNY 142
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
D VG E+ Y G+ + + LL + I +A + +T +
Sbjct: 143 DAVGSFEERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACE 196
>gi|67475302|ref|XP_653346.1| proteasome beta subunit [Entamoeba histolytica HM-1:IMSS]
gi|56470287|gb|EAL47959.1| proteasome beta subunit, putative [Entamoeba histolytica HM-1:IMSS]
Length = 226
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GT + I G DF +IASDTR S + I++ N KI+ L ++ SG AD E+
Sbjct: 24 YEDNCGTCVVIKGEDFVVIASDTRMSRDYMILTRNDSKIYPLTSKCVFTGSGMRADIKEL 83
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+++A I G+ +S A++LS LY R FPYY LL GI+ GK Y+Y
Sbjct: 84 TDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNY 143
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
D VG E+ Y G+ + + LL + I +A + +T +
Sbjct: 144 DAVGSFEERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACE 197
>gi|168019760|ref|XP_001762412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686490|gb|EDQ72879.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ +IA+DTR S+ +I++ + KI + + + SG AD +
Sbjct: 25 YDNNGGTCVAIAGADYCVIAADTRMSTGFSILTRDYSKIHHITEKCVLASSGFQADVRSL 84
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG VY+Y
Sbjct: 85 QKNLDARHQIYQHQHSKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVYTY 144
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y G+ ++
Sbjct: 145 DAVGSYERSGYSSQGSGQTLIM 166
>gi|402585903|gb|EJW79842.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 258
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSS-NGTIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y GGT AIAG +FA++ASDTR S I++ + KI L + + +G D L+
Sbjct: 47 YSFEGGTTAAIAGDNFAIMASDTRMSQFEINILTRDAEKIHVLNDSIVLSCAGFYGDILQ 106
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ L+A +++ +++ AE+LS LY RR FPYY +L GID GKG V+S
Sbjct: 107 LKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGAVFS 166
Query: 128 YDPVGHCEKVAYRLHGTSAKFML 150
YDP+G E +AY G++ ++
Sbjct: 167 YDPIGCIEHIAYTASGSAEPMIM 189
>gi|453081972|gb|EMF10020.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 255
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 8/150 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLP--------NQTAVGISG 60
Y +GG+ + I+G DF ++A DTRS+S I + + K+F++ ++ + + G
Sbjct: 28 YTDNGGSTLGISGSDFTILAGDTRSTSGYNINTRYEPKLFKIGGNGPENEGSKIVLSVVG 87
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+ +S+ A+ LS +LY +R FPYYV +L GID
Sbjct: 88 FAADGHALKERLDTVVKMYKYQHGKDISIGACAQRLSHILYGKRFFPYYVTAILGGIDED 147
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG +YSYDPVG E+ R G ++ ++
Sbjct: 148 GKGALYSYDPVGSYEREQCRAAGAASSLIM 177
>gi|366984552|gb|AEX09185.1| proteasome subunit beta type 1 [Gossypium hirsutum]
Length = 223
Score = 95.9 bits (237), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 81/148 (54%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG+ +AIAG D+ +IA+DTR S+ I++ KI +L ++ + SG
Sbjct: 5 QANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKICKLADKCVMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + +L A + +S P A++LS LY +R FPYY +L G+D GK
Sbjct: 65 ADVRALQKQLAARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G V +YD VG EKV Y G+ + ++
Sbjct: 125 GCVLTYDAVGSYEKVGYSSQGSGSTLIM 152
>gi|301108459|ref|XP_002903311.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262097683|gb|EEY55735.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 247
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 3/180 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
A E Y +GGTV+AIAG DF ++A DTR S+ +I+S ++ K+ L T +G G+
Sbjct: 34 RANWEPYDFNGGTVLAIAGEDFVVVAGDTRLSTGYSILSRDESKLHELTPTTVLGCPGSH 93
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D +++ L ++ +++L LY RR FPYY +L GID GK
Sbjct: 94 NDIIQLRGVLSIRAQMYQHDNETSMTSSAMSQLLMNTLYSRRFFPYYAFCILCGIDENGK 153
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G VY+YD +G ++V G+ M+ + L+ +++ D +T L+E ++K
Sbjct: 154 GVVYTYDAIGSYDRVTRAAQGSGGHLMIPLLDNLVE-HDTRTDPKKALT--LQETKDIIK 210
>gi|115480019|ref|NP_001063603.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|17380182|sp|O64464.1|PSB1_ORYSJ RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3138799|dbj|BAA28276.1| beta 6 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113631836|dbj|BAF25517.1| Os09g0505600 [Oryza sativa Japonica Group]
gi|125606253|gb|EAZ45289.1| hypothetical protein OsJ_29931 [Oryza sativa Japonica Group]
gi|215686333|dbj|BAG87594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215736983|dbj|BAG95912.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S I++ + KI L ++ A+ SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + ++
Sbjct: 129 DAVGSYERTGYSAQGTGSALIM 150
>gi|242049776|ref|XP_002462632.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
gi|241926009|gb|EER99153.1| hypothetical protein SORBIDRAFT_02g029260 [Sorghum bicolor]
Length = 221
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L ++ + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + M+
Sbjct: 129 DAVGSYERTGYSAQGTGSTLMM 150
>gi|167393146|ref|XP_001740446.1| proteasome subunit beta type-1 [Entamoeba dispar SAW760]
gi|165895460|gb|EDR23141.1| proteasome subunit beta type-1, putative [Entamoeba dispar SAW760]
Length = 221
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 85/174 (48%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GT + I G DF ++ASDTR S + I++ N KI+ L ++ SG AD E+
Sbjct: 19 YEDNCGTCVVIKGEDFVVVASDTRMSRDYMILTRNDSKIYPLTSKCIFTGSGMRADMKEL 78
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+++A I G+ +S A++LS LY R FPYY LL GI+ GK Y+Y
Sbjct: 79 TDQIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINSKGKAVTYNY 138
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
D VG E+ Y G+ + + LL + I +A + +T +
Sbjct: 139 DAVGSFEERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACE 192
>gi|290986448|ref|XP_002675936.1| predicted protein [Naegleria gruberi]
gi|284089535|gb|EFC43192.1| predicted protein [Naegleria gruberi]
Length = 223
Score = 95.5 bits (236), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AI GPD+ ++A+DTR S +I + K+ +L ++ + +G +D+ +
Sbjct: 15 YEDNGGTTLAIPGPDYVIVAADTRMSLGYSIQTRKSTKLCKLTDKCVIASAGMQSDAATL 74
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+ + G+P+S+ +MLS +LY RR FPYY L+ G+D GKG V+SY
Sbjct: 75 HKVLKMRLVEYEHQHGKPMSVVAVGQMLSNMLYNRRFFPYYTFNLVAGLDTDGKGIVFSY 134
Query: 129 DPVGHCEKV 137
D +G + V
Sbjct: 135 DAIGSYQSV 143
>gi|170578154|ref|XP_001894290.1| proteasome subunit beta type 1 [Brugia malayi]
gi|158599186|gb|EDP36871.1| proteasome subunit beta type 1, putative [Brugia malayi]
Length = 258
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSS-NGTIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y GGT AIAG +FA++ASDTR S +++ + KI L + + +G D L+
Sbjct: 47 YSFEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLSCAGFYGDILQ 106
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ L+A +++ +++ AE+LS LY RR FPYY +L GID GKG V+S
Sbjct: 107 LKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGAVFS 166
Query: 128 YDPVGHCEKVAYRLHGTSAKFML 150
YDP+G E +AY G++ ++
Sbjct: 167 YDPIGCIEHIAYTASGSAEPMIM 189
>gi|14594933|emb|CAC43327.1| putative beta6 proteasome subunit [Nicotiana tabacum]
Length = 192
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +A+AG D+ +IA+DTR SS I++ + KI +L ++ + SG AD +
Sbjct: 3 YDNNGGTCVAVAGADYCVIAADTRMSSGYNILTRDYSKIIKLADKCVLASSGFQADVKAL 62
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P ++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 63 QKVLAARHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDNEGKGCVFTY 122
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLL 157
D VG +V Y G+ + ++ + Y L
Sbjct: 123 DAVGSYGRVGYSSQGSGSTLIMPFLDYQL 151
>gi|302922344|ref|XP_003053446.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734387|gb|EEU47733.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 264
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTA------- 55
E Y +GG+ +AI+G DF ++A DTR +S +I S K+F++ TA
Sbjct: 31 EHRFNPYTDNGGSTLAISGADFTIMAGDTRHTSGYSINSRMSPKVFKIGGTTASQDDATL 90
Query: 56 -VGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL 114
+ + G AD + L G+P+++ A+ LS +LY +R FPYY +L
Sbjct: 91 VLSVVGFAADGEALRDHLDTICKIYRYRHGKPMTVNACAKRLSTVLYGKRFFPYYSHAML 150
Query: 115 VGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G+D GKG VYSYDPVG E+ R G + ++
Sbjct: 151 GGLDEEGKGAVYSYDPVGSYEREQCRAGGAAGSLIM 186
>gi|324507472|gb|ADY43167.1| Proteasome subunit beta type-1 [Ascaris suum]
Length = 253
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSS-NGTIVSNNQLKIFRLPNQTAVGISGNM 62
A Y GG+ A+AG +FA+IASDTR S I++ + KI L N + SG
Sbjct: 37 AFWNPYSFEGGSTAALAGDNFAIIASDTRMSQFEINILTRDAEKIHVLNNSIILACSGFY 96
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D L++ L+A +++ +++ AE+L+ LY RR FPYY +L GID GK
Sbjct: 97 GDVLQLKRLLEARLHKYRFDYRGDMTVDLCAELLARNLYYRRFFPYYTGSILAGIDEDGK 156
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G V+SYDP+G E++ Y G++ ++
Sbjct: 157 GAVFSYDPIGCIERLQYTASGSAEPMIM 184
>gi|356526807|ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
Length = 223
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI +L + + SG AD +
Sbjct: 11 YDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASSGFQADVKAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 71 QKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTY 130
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 131 DAVGSYERVGYSSQGSGSTLIM 152
>gi|255640620|gb|ACU20595.1| unknown [Glycine max]
Length = 207
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI +L + + SG AD +
Sbjct: 11 YDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKCVMASSGFQADVKAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 71 QKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTY 130
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 131 DAVGSYERVGYSSQGSGSTLIM 152
>gi|388496148|gb|AFK36140.1| unknown [Medicago truncatula]
Length = 237
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI L + + SG AD +
Sbjct: 11 YDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 71 QKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTY 130
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 131 DAVGSYERVGYSSQGSGSTLIM 152
>gi|414886159|tpg|DAA62173.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 234
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L ++ + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + ++
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIM 150
>gi|226531171|ref|NP_001152701.1| proteasome subunit beta type 1 [Zea mays]
gi|194701432|gb|ACF84800.1| unknown [Zea mays]
gi|195605546|gb|ACG24603.1| proteasome subunit beta type 1 [Zea mays]
gi|195659171|gb|ACG49053.1| proteasome subunit beta type 1 [Zea mays]
gi|223974469|gb|ACN31422.1| unknown [Zea mays]
gi|414589908|tpg|DAA40479.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L ++ + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 69 QKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + ++
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIM 150
>gi|357492211|ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
gi|355517729|gb|AES99352.1| Proteasome subunit beta type [Medicago truncatula]
Length = 223
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI L + + SG AD +
Sbjct: 11 YDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 71 QKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTY 130
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 131 DAVGSYERVGYSSQGSGSTLIM 152
>gi|17380185|sp|O82531.1|PSB1_PETHY RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome alpha subunit F; AltName: Full=20S proteasome
subunit beta-6
gi|3608485|gb|AAC35983.1| proteasome beta subunit [Petunia x hybrida]
Length = 223
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GGT +A+AG D+ +IA+DTR S+ I++ + KI +L ++ + SG
Sbjct: 5 QANWSPYDNNGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L + + +S P ++LS LY +R FPYY +L G+D GK
Sbjct: 65 ADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGK 124
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFML 150
G V++YD VG E+V Y G+ + ++
Sbjct: 125 GCVFTYDAVGSYERVGYSSQGSGSTLIM 152
>gi|357454307|ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
gi|355486482|gb|AES67685.1| Proteasome subunit beta type [Medicago truncatula]
Length = 231
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI L + + SG AD +
Sbjct: 19 YDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMASSGFQADVKAL 78
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 79 QKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTY 138
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 139 DAVGSYERVGYSSQGSGSTLIM 160
>gi|312066298|ref|XP_003136204.1| proteasome subunit beta type 1 [Loa loa]
gi|307768639|gb|EFO27873.1| proteasome subunit beta type 1 [Loa loa]
Length = 258
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSS-NGTIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y GGT AIAG +FA++ASDTR S +++ + KI L + + +G D L+
Sbjct: 47 YSFEGGTTAAIAGDNFAIMASDTRMSQFEINVLTRDAEKIHVLNDSIVLSCAGFYGDVLQ 106
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ L+A +++ +++ AE+LS LY RR FPYY +L GID GKG V+S
Sbjct: 107 LKRLLEARLHKYRFDYRGDMTVDLCAELLSRNLYYRRFFPYYTGAILAGIDENGKGAVFS 166
Query: 128 YDPVGHCEKVAYRLHGTSAKFML 150
YDP+G E + Y G++ ++
Sbjct: 167 YDPIGCIEHIGYTASGSAEPMIM 189
>gi|377834609|ref|XP_003689507.1| PREDICTED: proteasome subunit beta type-1-like [Mus musculus]
Length = 276
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG V+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 32 YAFNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + + + A MLS + RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIETRLKMN-----KAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSF 146
Query: 129 DPVG 132
DPVG
Sbjct: 147 DPVG 150
>gi|308807300|ref|XP_003080961.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
gi|116059422|emb|CAL55129.1| PSB1_PETHY Proteasome subunit beta type 1 (ISS) [Ostreococcus
tauri]
Length = 233
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+A+AG + + A DTR SS I++ KI ++ +T + +G AD++ +
Sbjct: 21 YDNNGGTVLAVAGESYVICAGDTRMSSGYNILTRKFEKIDKMSGKTLMASAGFAADAVTL 80
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+A + + + A+MLS LY RR FPYY ++ G+D GKG V++Y
Sbjct: 81 KKTLKARCKQYEFQNKREIGCVAFAQMLSNTLYYRRFFPYYAFNIVAGLDAEGKGAVFTY 140
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y G+ ++
Sbjct: 141 DAVGSYERTNYSCQGSGQALIM 162
>gi|123447011|ref|XP_001312251.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121894091|gb|EAX99321.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 224
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 78/138 (56%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y HGGT + I G D+ +I +DTR S + +I S ++ +IF++ + + +G D
Sbjct: 16 YEMHGGTAIGICGDDYVVIGADTRLSVDYSIDSRHKARIFKMNSNCMISATGFDGDIDAF 75
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++R+++ + +S+ A +S LY +R FPYY+ +L+ GI+ GKG +Y Y
Sbjct: 76 ITRMRSILLNYENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGINSEGKGKLYGY 135
Query: 129 DPVGHCEKVAYRLHGTSA 146
DPVG E + Y +G+ +
Sbjct: 136 DPVGTIEDLHYDSNGSGS 153
>gi|414886158|tpg|DAA62172.1| TPA: proteasome subunit beta type [Zea mays]
Length = 221
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L ++ + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + ++
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIM 150
>gi|195611928|gb|ACG27794.1| proteasome subunit beta type 1 [Zea mays]
Length = 221
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L ++ + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 69 QKNLAARELLYQXQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + ++
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIM 150
>gi|72391616|ref|XP_846102.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175642|gb|AAX69774.1| proteasome beta 6 subunit [Trypanosoma brucei]
gi|70802638|gb|AAZ12543.1| proteasome beta 6 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 258
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y +GGT+ AIAG ++ ++ +DTR + + I ++ K+F+L ++ + SG AD L+
Sbjct: 48 YTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQ 107
Query: 68 VVSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ L+ I G + S A++ S +LY+RR FPYY ++VGID G G Y
Sbjct: 108 LQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCY 167
Query: 127 SYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
SYDPVG E Y G+++ F+ + LL+
Sbjct: 168 SYDPVGSTEPFRYGTCGSASSFVEPLLDCLLT 199
>gi|46397057|sp|Q9U794.1|PSB1_TRYBB RecName: Full=Proteasome subunit beta type-1; AltName: Full=20S
proteasome subunit beta-6
gi|6224687|gb|AAF05905.1|AF148124_1 20S proteasome beta 6 subunit [Trypanosoma brucei brucei]
gi|261329654|emb|CBH12636.1| 20S proteasome beta 6 subunit, putative [Trypanosoma brucei
gambiense DAL972]
Length = 258
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 85/152 (55%), Gaps = 2/152 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y +GGT+ AIAG ++ ++ +DTR + + I ++ K+F+L ++ + SG AD L+
Sbjct: 48 YTDNGGTIAAIAGSNYVVLGADTRLNGDFCIHTRSDTSKLFKLTDRIFLASSGMQADRLQ 107
Query: 68 VVSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ L+ I G + S A++ S +LY+RR FPYY ++VGID G G Y
Sbjct: 108 LQQMLKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGIDEKGAGVCY 167
Query: 127 SYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
SYDPVG E Y G+++ F+ + LL+
Sbjct: 168 SYDPVGSTEPFRYGTCGSASSFVEPLLDCLLT 199
>gi|429329412|gb|AFZ81171.1| proteasome subunit beta type 1, putative [Babesia equi]
Length = 218
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 11/178 (6%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGTV+A ++A+IA+DTR S I + N K+ +L + +G SG AD L +
Sbjct: 11 YVNNGGTVVAATWKNYAVIAADTRLSIGYAIHTRNVSKMIKLTDTCILGTSGMQADMLAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
S ++ ++ + S A++LS +LY RR FPYY +L GID G G V SY
Sbjct: 71 HSAMERQVELYRFTHHKTPSFGAIAQLLSTILYSRRFFPYYTFNILCGIDENGNGVVCSY 130
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVIT----MALEELTPVVK 182
D +G+ Y GTS+ S + S ++ + + + + +LE+L ++K
Sbjct: 131 DAIGNYNYEKYAAQGTSS-------SLITSIFDCQINGNNCLVKPEIKSLEDLVNIIK 181
>gi|390602798|gb|EIN12190.1| proteasome subunit [Punctularia strigosozonata HHB-11173 SS5]
Length = 276
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT++AIAG DF +IA DTR S I + K+F+L ++ + ++G AD
Sbjct: 22 YSDNGGTILAIAGADFTVIAGDTRQSEGYNIQTRYAPKVFKLTDRAVLAVNGFAADGNMF 81
Query: 69 VSRLQA--EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI--DG----- 119
V +++ E R A AK PL A ++ +LY RR FPYYV +L GI DG
Sbjct: 82 VKKVKQRLEWYRHAHAKDMPLH--AIARLIQTMLYARRFFPYYVYNILGGIEEDGTSAHS 139
Query: 120 ------------TGKGGVYSYDPVGHCEKVAYRLHGTS 145
TG G VYS+DPVG E+ R G +
Sbjct: 140 ARPAFSSHFPTRTGSGAVYSFDPVGSYERETCRAAGAA 177
>gi|388505884|gb|AFK41008.1| unknown [Lotus japonicus]
Length = 223
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 79/142 (55%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+ +AIAG D+ +IA+DTR S+ I++ KI +L ++ + SG AD +
Sbjct: 11 YDNNGGSCVAIAGADYCVIAADTRMSTGYNILTREYSKISQLAEKSVMASSGFQADVKAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GKG V++Y
Sbjct: 71 QKVLSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTY 130
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 131 DAVGSYERVGYSSQGSGSTLIM 152
>gi|299116145|emb|CBN76052.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 249
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 78/146 (53%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A E Y +GGTV+A+AGPD+ +IA+D+R S TI+S N ++ RL T + +G A
Sbjct: 26 AGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWA 85
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D+ ++ L+ I + + + + MLS LY RR FP+Y ++ G+D G G
Sbjct: 86 DTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEEGIG 145
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFM 149
VY YD VG E+V G M
Sbjct: 146 AVYGYDAVGSFERVRVACAGGGLSLM 171
>gi|146070767|ref|XP_001463096.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
gi|134067179|emb|CAM65445.1| putative 20S proteasome beta 6 subunit [Leishmania infantum JPCM5]
Length = 247
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVS-NNQLKIFRLPNQTAVGISGNMADSLE 67
Y +GGT AIAG DF ++A DTR + + + S ++Q KIF+L T + +G AD L+
Sbjct: 37 YQDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQ 96
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGT---AEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ L+ + G +P T A+++S LLY RR FPYY ++VG+D G G
Sbjct: 97 LQQMLKYRVKWYQYNNGG--RVPPTKAIAQLMSTLLYHRRFFPYYTFNMVVGLDEEGHGV 154
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
YSYD VG E Y G++A F+ + L++
Sbjct: 155 CYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN 188
>gi|448105494|ref|XP_004200509.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|448108619|ref|XP_004201140.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359381931|emb|CCE80768.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
gi|359382696|emb|CCE80003.1| Piso0_003099 [Millerozyma farinosa CBS 7064]
Length = 241
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 5/150 (3%)
Query: 6 LEH----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
+EH Y +GGTV+ IAG DFA++A DTR +I S + ++F + + + +G
Sbjct: 17 IEHSFNPYQDNGGTVLGIAGEDFAVLAGDTRQVVGYSINSRYEPRVFDVGDNILMTANGF 76
Query: 62 MADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD ++++ + + + G+ LS+ A + LLY +R FP+YV L+ G++
Sbjct: 77 SADGNALINKFKNSLKWYKFDHGGKKLSIKSAARYIQHLLYGKRFFPFYVSTLIAGLNDE 136
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG VYSYDPVG E R G +A ++
Sbjct: 137 GKGVVYSYDPVGSYEVEQCRAGGAAASLIM 166
>gi|452980444|gb|EME80205.1| hypothetical protein MYCFIDRAFT_49844 [Pseudocercospora fijiensis
CIRAD86]
Length = 263
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 8/149 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL----PNQTAVGIS----G 60
Y +GG+ + I+G DF ++A DTRS+S I + K+F++ P+ I G
Sbjct: 36 YTDNGGSTLGISGEDFTILAGDTRSTSGYNINTRYAPKLFKIGGEGPDHVGAKIVLSVVG 95
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD + RL + G+ +S+ A+ LS +LY +R FPYYV +L GID
Sbjct: 96 FAADGNALKERLDTIVKMYKYQHGKDISIGACAQRLSHILYGKRFFPYYVTAILGGIDEE 155
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
GKG +YSYDPVG E+ R G ++ +
Sbjct: 156 GKGALYSYDPVGSYEREQCRSAGAASSLI 184
>gi|294942317|ref|XP_002783482.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239895942|gb|EER15278.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 242
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT +A+ G D+ ++++D R S +I + N KI +L + + SG +AD + +
Sbjct: 34 YVDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQITL 93
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+ + R + ++ A+MLS +LY +R FPYY ++ GID G+G VY Y
Sbjct: 94 HKVLKNRVARYVHEHRREPTIGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGQGKVYGY 153
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVIT 171
D +G E + G+ + + + + L+ + + +T
Sbjct: 154 DAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHEALT 196
>gi|449020004|dbj|BAM83406.1| 20S core proteasome subunit beta 6 [Cyanidioschyzon merolae strain
10D]
Length = 244
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS--L 66
YV +GGTV+A+AG D+A++A+DTR S +I S N KI +L +Q + +G AD L
Sbjct: 31 YVDNGGTVLALAGRDYAIVAADTRLSVGFSIPSRNFTKIVQLTDQAVLASAGMGADRQYL 90
Query: 67 EVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGV 125
+ R + EI R K +SL A++LS LY RR FP Y +L GID TG+G V
Sbjct: 91 HKILRSRLEIYRYQHQK--EMSLGAIAQLLSNTLYSRRFFPIYAFNVLGGIDANTGEGFV 148
Query: 126 YSYDPVGHCEKVAYRLHGT 144
+ YD +G EKV G+
Sbjct: 149 FGYDAIGSFEKVKVVCSGS 167
>gi|309271453|ref|XP_003085312.1| PREDICTED: splicing factor U2AF 65 kDa subunit-like [Mus musculus]
Length = 730
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 75/128 (58%), Gaps = 5/128 (3%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG V+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 32 YAFNGGPVLAIAGEDFSIVASDTRLSEEFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ + + + + A MLS + RR FPYYV ++ G+D GKG VYS+
Sbjct: 92 TKIIETRLKMN-----KAMRTGAVAAMLSTIPCSRRFFPYYVYNIIGGLDEEGKGAVYSF 146
Query: 129 DPVGHCEK 136
DPVG ++
Sbjct: 147 DPVGSYQR 154
>gi|157864139|ref|XP_001680783.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
gi|68124075|emb|CAJ02057.1| putative 20S proteasome beta 6 subunit [Leishmania major strain
Friedlin]
Length = 247
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 83/152 (54%), Gaps = 2/152 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVS-NNQLKIFRLPNQTAVGISGNMADSLE 67
Y +GGT AIAG DF ++A DTR + + + S ++Q KIF+L T + +G AD L+
Sbjct: 37 YHDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQ 96
Query: 68 VVSRLQAEINRSAEAKGQPLS-LPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ L+ + G + A+++S +LY RR FPYY ++VG+D G G Y
Sbjct: 97 LQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHGVCY 156
Query: 127 SYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
SYD VG E Y G++A F+ + L++
Sbjct: 157 SYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN 188
>gi|398010249|ref|XP_003858322.1| proteasome beta 6 subunit, putative [Leishmania donovani]
gi|322496529|emb|CBZ31598.1| proteasome beta 6 subunit, putative [Leishmania donovani]
Length = 247
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVS-NNQLKIFRLPNQTAVGISGNMADSLE 67
Y +GGT AIAG DF ++A DTR + + + S ++Q KIF+L T + +G AD L+
Sbjct: 37 YQDNGGTTAAIAGKDFVILAGDTRLNGDYCLHSRHDQSKIFQLTPYTYMASNGMQADRLQ 96
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGT---AEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ L+ + G +P T A+++S +LY RR FPYY ++VG+D G G
Sbjct: 97 LQQMLKYRVKWYQYNNGG--RVPPTKAIAQLMSTMLYHRRFFPYYTFNMVVGLDEEGHGV 154
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
YSYD VG E Y G++A F+ + L++
Sbjct: 155 CYSYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN 188
>gi|294940012|ref|XP_002782634.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239894486|gb|EER14429.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y+ +GGT +A+ G D+ ++++D R S +I + N KI +L + + SG +AD + +
Sbjct: 33 YMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQITL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+ + R + ++ A+MLS +LY +R FPYY ++ GID GKG VY Y
Sbjct: 93 HKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGKGKVYGY 152
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVIT 171
D +G E + G+ + + + + L+ + + +T
Sbjct: 153 DAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHEALT 195
>gi|294955484|ref|XP_002788528.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239904069|gb|EER20324.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 241
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y+ +GGT +A+ G D+ ++++D R S +I + N KI +L + + SG +AD + +
Sbjct: 33 YMDNGGTCIAVPGADYCVVSTDNRVSKGYSIATRNGSKITKLTERCVITTSGMLADQITL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+ + R + ++ A+MLS +LY +R FPYY ++ GID GKG VY Y
Sbjct: 93 HKVLKNRVARYVHEHRREPTVGAVAQMLSNILYYKRFFPYYTFNMIAGIDENGKGKVYGY 152
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVIT 171
D +G E + G+ + + + + L+ + + +T
Sbjct: 153 DAIGSFESIPCGAQGSGSSLVQSILDNQLTKAHQQLASHEALT 195
>gi|119567807|gb|EAW47422.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_c [Homo sapiens]
Length = 147
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
++A + + + ++ A MLS +LY RR FPYYV ++ G+D G
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 145
>gi|401827105|ref|XP_003887645.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
gi|392998651|gb|AFM98664.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
Length = 290
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GTV+ + DF +++ DTR SS I S KIFR+ N G +G ADS EV
Sbjct: 86 YEDNSGTVVCLKQDDFVVVSGDTRHSSEMVINSREMSKIFRIGNFFLTG-TGFYADSHEV 144
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+++ EI R E G P+++ A +LS +LY RR FPYY L G D GK +Y+Y
Sbjct: 145 YVKMEYEI-RQYEVDG-PINIHSAANLLSKILYSRRFFPYYSYCTLSGFD-NGKPYIYAY 201
Query: 129 DPVGHCEKVAYRLHGT 144
DPVG E V +G+
Sbjct: 202 DPVGSFESVTCECNGS 217
>gi|119567806|gb|EAW47421.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_b [Homo sapiens]
Length = 166
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
++A + + + ++ A MLS +LY RR FPYYV ++ G+D G
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 145
>gi|426355245|ref|XP_004045039.1| PREDICTED: proteasome subunit beta type-1 [Gorilla gorilla gorilla]
Length = 245
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGT++AIAG DFA++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 105 YVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 164
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
++A + + + ++ A MLS +LY RR FPYYV ++ G+D G
Sbjct: 165 TKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEG 217
>gi|449295464|gb|EMC91486.1| hypothetical protein BAUCODRAFT_117991 [Baudoinia compniacensis
UAMH 10762]
Length = 265
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQ-------- 53
T+ Y +GG+ + I+G F +IA DTRS+S I + K++ + Q
Sbjct: 30 TQHAFYPYTDNGGSTLGISGKTFTVIAGDTRSTSGYNINTRYAPKLYPIGGQGPTHKGSK 89
Query: 54 TAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVL 113
+ + G AD + RL + G +S+ A+ LS +LY +R FPYYVQ +
Sbjct: 90 IVLSVVGFAADGRALQERLDTVVKMYRYQHGCEISVKACAQRLSHILYNKRFFPYYVQAI 149
Query: 114 LVGID-GTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM---LASMSYLLSPYE----SEFD 165
L GID TG+G +YSYDPVG E+ R G +A + L + L + YE S FD
Sbjct: 150 LGGIDEETGEGALYSYDPVGSYEREYCRAAGAAASLIMPFLDNQVNLKNQYEPAAVSGFD 209
Query: 166 YTDVITMALE 175
++ LE
Sbjct: 210 KKQLVPQPLE 219
>gi|126644014|ref|XP_001388169.1| proteasome subunit beta type 1 [Cryptosporidium parvum Iowa II]
gi|126117246|gb|EAZ51346.1| proteasome subunit beta type 1, putative [Cryptosporidium parvum
Iowa II]
Length = 246
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 4/131 (3%)
Query: 6 LEH----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
+EH Y+ +GG+ +A+AG DF +IA+DTR S I S + K +L N+ + SG
Sbjct: 33 IEHSFNPYMNNGGSCVAVAGDDFVVIAADTRLSKMYRIASRSVSKTCQLTNKCILACSGM 92
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
+AD + L A++ + S+ A++LS +LY +R FPYY LL G+D G
Sbjct: 93 LADINALRKTLLAKVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDEQG 152
Query: 122 KGGVYSYDPVG 132
KG VY YD VG
Sbjct: 153 KGVVYGYDAVG 163
>gi|224033845|gb|ACN35998.1| unknown [Zea mays]
Length = 221
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L ++ + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GK V++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKECVFTY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + ++
Sbjct: 129 DAVGSYERTGYSAQGTGSTLIM 150
>gi|149237248|ref|XP_001524501.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146452036|gb|EDK46292.1| proteasome component C5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 243
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGTV+ IAG DFA++A DTR +I S + ++ + + + +G
Sbjct: 21 EHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYEPRVHNVGDNILMTANGFA 80
Query: 63 ADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
AD + ++ R + + + + L + A + LLY +R FPY V L+ G+D G
Sbjct: 81 ADGVALIDRFKQSFKWYKFDNENRKLEISSAARYIQHLLYGKRFFPY-VSTLIAGLDEEG 139
Query: 122 KGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
KG VYSYDPVG E+ R G +A ++
Sbjct: 140 KGAVYSYDPVGSYEREQCRAGGAAASLIM 168
>gi|346467893|gb|AEO33791.1| hypothetical protein [Amblyomma maculatum]
Length = 221
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI +L +++ + SG D +
Sbjct: 9 YENNGGTCVAIAGLDYCVVAADTRMSVGYSILTRDYSKICQLADKSILASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A+ + +S P ++LS LY +R PYY +L G+D GKG V++Y
Sbjct: 69 QKNLAAKHLIYQHQHNKQMSCPAMGQLLSNTLYYKRXXPYYAFNVLAGLDNEGKGCVFTY 128
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+V Y G+ + ++
Sbjct: 129 DAVGSYERVGYSAQGSGSTLIM 150
>gi|222431909|gb|ACM50881.1| 20S proteasome beta subunit F1 [Ulva fasciata]
Length = 241
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 71/136 (52%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+A+AG D+ +IA TR S+ +++S + +L + SG D +
Sbjct: 29 YDNNGGTVVAVAGSDYCIIAGSTRLSTGFSVLSREHSSLHQLSRMCVLASSGFEGDRATL 88
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
RL++ + +P+ A+ LS LY +R FP+Y +L G+D G G VYSY
Sbjct: 89 TKRLKSRAVMYQHSHKRPIGCEAMAQALSNELYGKRFFPFYTFNILAGLDADGTGAVYSY 148
Query: 129 DPVGHCEKVAYRLHGT 144
D VG E+ Y GT
Sbjct: 149 DAVGSYERTGYAAQGT 164
>gi|452821727|gb|EME28754.1| 20S proteasome subunit beta 6 [Galdieria sulphuraria]
Length = 232
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AI G D+ ++++ TR I + N + L N+ + +G AD+ +
Sbjct: 22 YQNNGGTVVAIGGEDYCIVSATTRLGLGFAIPTRNVCRYSILNNRVVLATAGMFADTATL 81
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + E + +P L A++LS LY RR FPYY +L G+D G+G VY +
Sbjct: 82 HKVIKARVKIYEEQQDKPFGLHSAAQLLSNTLYYRRFFPYYTFNVLGGLDEDGQGFVYGF 141
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
D +G EKV +GT + + + + +++ + ++L+E ++K
Sbjct: 142 DAIGSGEKVKVVCNGTGQALIQPILDNQVEK-KQQYENKQITKLSLQEAVDLIK 194
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GGTV AIAG D+ +IA+DTR + I+S N ++ L + +G +G D ++
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ +I + +S A +LS LY RR FP Y +L G+D G+G +YSYD +
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDV 169
G E + Y + G++ ++ + ++ Y D+
Sbjct: 122 GSFELMKYAVQGSAQSHIIPILDSCVAKKNRNEPYVDL 159
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GGTV AIAG D+ +IA+DTR + I+S N ++ L + +G +G D ++
Sbjct: 2 NGGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRT 61
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ +I + +S A +LS LY RR FP Y +L G+D G+G +YSYD +
Sbjct: 62 LEYDIKEYKYNHREEISTSAVAALLSNTLYNRRFFPIYAFNVLCGLDENGQGVIYSYDAI 121
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDV 169
G E + Y + G++ ++ + ++ Y D+
Sbjct: 122 GSFELMKYAVQGSAQSHIIPILDSCVAKKNRNEPYVDL 159
>gi|403224082|dbj|BAM42212.1| proteasome subunit [Theileria orientalis strain Shintoku]
Length = 220
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGTV+A ++A+IA+DTR S I + K+ +L ++ +G SG AD L +
Sbjct: 13 YVNNGGTVIAATWKNYAVIAADTRLSLRYLIHTRYSTKLLKLTDKCILGTSGMQADMLAL 72
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
S ++ +I + + A++LS +LY RR FPYY +L G+D G G +Y
Sbjct: 73 QSVIERQIEMYRFTHHKEPTFGAIAQLLSTVLYGRRFFPYYTFNILCGLDENGNGVTCNY 132
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
D VG+ Y GTS+ ++ + LL+
Sbjct: 133 DAVGNYNYEKYAAQGTSSSLVVPILDNLLN 162
>gi|401415060|ref|XP_003872026.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488248|emb|CBZ23493.1| putative 20S proteasome beta 6 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 247
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 81/152 (53%), Gaps = 2/152 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGNMADSLE 67
Y +GGT AIAG F ++A DTR + + + ++Q KIF+L T + +G AD ++
Sbjct: 37 YQDNGGTTAAIAGKGFVILAGDTRLNGDYCLHCRHDQSKIFQLTPYTYMASNGMQADRVQ 96
Query: 68 VVSRLQAEINRSAEAKGQPLS-LPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ L+ + G + A+++S +LY RR FPYY ++VG+D G G Y
Sbjct: 97 LQQMLKYRVKWYQYNNGGKVPPTKAIAQLMSTMLYHRRFFPYYTFNMIVGLDEEGNGVCY 156
Query: 127 SYDPVGHCEKVAYRLHGTSAKFMLASMSYLLS 158
SYD VG E Y G++A F+ + L++
Sbjct: 157 SYDAVGSTEPFLYGTRGSAASFLEPVLDCLIN 188
>gi|209881526|ref|XP_002142201.1| proteasome subunit beta type 1 [Cryptosporidium muris RN66]
gi|209557807|gb|EEA07852.1| proteasome subunit beta type 1, putative [Cryptosporidium muris
RN66]
Length = 245
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SL 66
Y +GG+ +A+AG DFA+I SDTR S I S + ++F + + + SG AD +L
Sbjct: 38 YTDNGGSCIALAGSDFAVIVSDTRLSQGYRIASRSVTRVFEITAKCVLSCSGMFADITAL 97
Query: 67 EVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ + R + +I E K P S+ A++LS +LY +R FPYY + G+D G G Y
Sbjct: 98 QKLIRARVKI-YEFEHKKSP-SIGAVAQLLSTVLYSKRFFPYYCYCAIAGLDEYGNGVAY 155
Query: 127 SYDPVGHCEKVAYRLHGTSAKFM 149
YD VG + Y +GT + +
Sbjct: 156 GYDAVGSFQSGKYFANGTGSHLI 178
>gi|444728635|gb|ELW69084.1| Proteasome subunit beta type-1 [Tupaia chinensis]
Length = 283
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 14/141 (9%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S ++ + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGFSVHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++A + + + ++ A MLS +LY RR F KG VYS+
Sbjct: 93 TKIIEARLKMYKHSNNKAMTTGAVAAMLSTILYSRRFF--------------XKGAVYSF 138
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
DPVG ++ +++ G+++ +
Sbjct: 139 DPVGSYQRDSFKAGGSASAML 159
>gi|330038504|ref|XP_003239615.1| 26S proteasome SU B6 [Cryptomonas paramecium]
gi|327206539|gb|AEA38717.1| 26S proteasome SU B6 [Cryptomonas paramecium]
Length = 245
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GT+++IA ++ ++ SDTR + +I + Q +IF++ + + +G AD+
Sbjct: 37 YQNNSGTIISIANQNYCVVVSDTRYLNGFSIPTRFQTRIFKISEKIILASAGMFADAFFF 96
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ + I + +S+ A +S LLY +R FPYYV +L G+D KG VYS+
Sbjct: 97 QKKTKTSIKDYEYGIKKAISVESCAFYISSLLYSKRFFPYYVFNVLSGLDENDKGSVYSF 156
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPY 160
D VG EK+ + G S A++ LL Y
Sbjct: 157 DSVGSFEKLKFNCIGESC----AAIQPLLDSY 184
>gi|403374976|gb|EJY87456.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 255
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV + GT +AIAG DF L+ASDTR S I+S + RL +Q + SG M +E
Sbjct: 48 YVNNQGTTVAIAGEDFVLVASDTRISQGFNILSREYSRTTRLTDQCVI-TSGGMVADIET 106
Query: 69 VSRLQAEINRSAEAKGQPL-SLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ +L ++ + + + ++ A++L LY RR P+Y LL GID G+G VY
Sbjct: 107 LHKLLISKVKTYQRQFKKTPTVESLAQLLGNTLYGRRFMPFYAFNLLCGIDVNGQGTVYG 166
Query: 128 YDPVGHCEKVAYRLHGTSAKF 148
YD +G +K+ Y + G+ ++
Sbjct: 167 YDAIGSYDKLTYGVQGSGSEL 187
>gi|195046971|ref|XP_001992246.1| GH24307 [Drosophila grimshawi]
gi|193893087|gb|EDV91953.1| GH24307 [Drosophila grimshawi]
Length = 285
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G+++ I G DF +IASD R + I+ K+F + Q+ +G GN D + + + +
Sbjct: 81 NGSIIFIEGRDFVVIASDNRLITKLDILRK-HFKLFPMTPQSIIGSIGNWGDVVAMTALI 139
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+ + + + +S A M+S L+Y RR+FP + +L G+D GKG V+ +D +G
Sbjct: 140 RRRVQVYEQDNKKTISTEALASMISTLMYNRRLFPCLMITILAGLDNEGKGAVFHFDEIG 199
Query: 133 HCEKVAYRLHGTSAKFMLASMSYLLSPYES 162
+ E+ Y + G + MLA + + + +S
Sbjct: 200 NRERCRYLIIGGARDIMLAKLRHSIGEIDS 229
>gi|146186065|ref|XP_001032955.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|146143157|gb|EAR85292.2| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 247
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV + GTV AIA DF ++A D R S +IVS + K+ RL + + SG AD +
Sbjct: 39 YVFNAGTVCAIAHGDFVIVAGDKRISQGYSIVSRDISKLARLTDNVFLATSGMYADFAAL 98
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+L A ++ G+ ++ A +LS LY +R FPYY LL G D G+G V +Y
Sbjct: 99 SKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDDKGEGLVINY 158
Query: 129 DPVGHCEKVAYRLHGTSAKFM 149
D VG + Y + G+ A+ +
Sbjct: 159 DAVGSGDFKKYAVLGSGAQLI 179
>gi|162606130|ref|XP_001713580.1| 26S proteasome SU B6 [Guillardia theta]
gi|13794500|gb|AAK39875.1|AF165818_83 26S proteasome SU B6 [Guillardia theta]
Length = 239
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 69/124 (55%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG V+AI G F ++ASDTR S +I S L+I ++ N +G SG ++D +
Sbjct: 33 YQNNGGLVLAITGNKFCVMASDTRISMGYSIPSRLNLRILKISNLCLLGSSGMISDINIL 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+L+ EI R L+L G + S LLY RR FP+Y +L GI+ GK Y+Y
Sbjct: 93 HQKLRNEIFRLKYLNNTELNLNGIVYLTSSLLYSRRFFPFYTFNILTGINELGKASNYTY 152
Query: 129 DPVG 132
D +G
Sbjct: 153 DAIG 156
>gi|156084624|ref|XP_001609795.1| proteasome A-type and B-type family protein [Babesia bovis]
gi|154797047|gb|EDO06227.1| proteasome A-type and B-type family protein [Babesia bovis]
Length = 217
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 91/174 (52%), Gaps = 3/174 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGTV+A + A+IA+DTR S I + N K+ +L +G SG AD +
Sbjct: 10 YVNNGGTVVAAVWNNCAVIAADTRLSIGYAIHTRNVSKLKKLTQTCVIGTSGMQADMHAL 69
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
S L+ +I + + A++LS +LY RR FPYY +L G+D G+G +
Sbjct: 70 HSALERQIELYRFKHHREPGISVIAQLLSTILYSRRFFPYYTFNILCGVDENGRGITCGF 129
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
D +G+ AY GTS+ +++ + L+ + + ++ +LEEL V+K
Sbjct: 130 DAIGNYGFDAYMAKGTSSSLIMSILDNHLTSRNQQ-KHNEI--QSLEELINVIK 180
>gi|378754633|gb|EHY64663.1| hypothetical protein NERG_02282 [Nematocida sp. 1 ERTm2]
Length = 242
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%)
Query: 7 EHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSL 66
E Y + GT ++I G DF ++ASDTR S+ I + K F L + + +G ADS
Sbjct: 30 ELYGDNSGTSLSIVGADFCVVASDTRHSAMYNINTRQATKSFCLDGRFILSTTGFYADSR 89
Query: 67 EVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ S+L EI++ + +++ A +L +LLY R FP + LVG + + ++
Sbjct: 90 YIFSKLAYEIDKYQFKYNKKMAIEQAAALLHVLLYTHRFFPKFTYCCLVGFNENNEPKIF 149
Query: 127 SYDPVGHCEKVAYRLHGT 144
SYDPVG ++ R +G+
Sbjct: 150 SYDPVGSYQETPCRCNGS 167
>gi|225712140|gb|ACO11916.1| Proteasome subunit beta type-1-A [Lepeophtheirus salmonis]
Length = 238
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 7/142 (4%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQ---TAVGISGNMADS 65
Y + GT +AI+ P+F + ASD R+SS+ TI S N KIF+L N +A G G++
Sbjct: 31 YESNSGTTLAISTPEFNIFASDIRNSSSFTIHSRNCSKIFKLKNSITFSATGFFGDIYRV 90
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
E++ Q + E + + + A L +LY +R FP+Y ++L GI+ G+ +
Sbjct: 91 FEILKHKQELFYQQFE---KEMLVSELAHFLMNVLYSKRFFPFYGFIVLGGIE-NGECAM 146
Query: 126 YSYDPVGHCEKVAYRLHGTSAK 147
YSYDPVG +K R +GT K
Sbjct: 147 YSYDPVGSYQKDTARCYGTGMK 168
>gi|156095478|ref|XP_001613774.1| proteasome subunit beta type 1 [Plasmodium vivax Sal-1]
gi|148802648|gb|EDL44047.1| proteasome subunit beta type 1, putative [Plasmodium vivax]
Length = 241
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
Query: 3 EAMLEH---------YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQ 53
EA++EH YV +GGTV+ + G D+ ++A+DTR S + +I + + KI +L ++
Sbjct: 19 EAVVEHGRGFKRWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDK 78
Query: 54 TAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVL 113
+G SG +D + S L+ +I + A +L ++LY RR FPYY L
Sbjct: 79 CIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNL 138
Query: 114 LVGIDGTGKGGVYSYDPVG-HCE 135
L G+ KG +Y+YD +G +CE
Sbjct: 139 LAGVSNDSKGVLYNYDAIGSYCE 161
>gi|296004560|ref|XP_002808699.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
gi|225631686|emb|CAX63970.1| proteasome subunit beta type 1, putative [Plasmodium falciparum
3D7]
Length = 240
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 10/143 (6%)
Query: 3 EAMLEH---------YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQ 53
E ++EH Y+ +GGTV+ + G D+ ++A+DTR S + +I + KI +L ++
Sbjct: 18 ENVIEHGRGFKRWYPYIDNGGTVIGLTGKDYVILAADTRLSLSYSIYTRFCPKISKLTDK 77
Query: 54 TAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVL 113
+G SG +D + S LQ +I + A +L ++LY RR FPYY +
Sbjct: 78 CIIGSSGMQSDIKTLHSLLQKKIQLFVLEHSHYPDIHVIARLLCVILYSRRFFPYYAFNI 137
Query: 114 LVGIDGTGKGGVYSYDPVG-HCE 135
L G+D KG +Y+YD VG +CE
Sbjct: 138 LAGVDENNKGVLYNYDSVGSYCE 160
>gi|311334476|emb|CBN08619.1| proteasome (prosome, macropain) subunit, beta type 1 [Microcosmus
squamiger]
Length = 181
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%)
Query: 38 TIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLS 97
+I S N+ K +L + +G +G D+L + L+ I G+ S+ A MLS
Sbjct: 2 SIHSRNEPKTMQLTSNGVLGAAGFHGDALTLRKVLKYRIKMYVHEHGKEPSVCAIAAMLS 61
Query: 98 LLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
+LY +R FPYYV LL GID GKG V+SYDPVG E+ AYR G++A+ +
Sbjct: 62 TILYYKRFFPYYVYNLLAGIDEEGKGCVFSYDPVGCYEREAYRAEGSAAELL 113
>gi|70954344|ref|XP_746223.1| proteasome subunit beta type 1 [Plasmodium chabaudi chabaudi]
gi|56526764|emb|CAH76320.1| proteasome subunit beta type 1, putative [Plasmodium chabaudi
chabaudi]
Length = 252
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 19/168 (11%)
Query: 2 TEAMLEH---------YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPN 52
EA +EH YV +GGTV+ + G D+ ++A DTR S + +I + N KI ++ +
Sbjct: 19 NEAPIEHARPSKRWNPYVDNGGTVIGLTGKDYVILAGDTRLSLSYSIYTRNCPKISKITD 78
Query: 53 QTAVGISGNMADSLEVVSRLQAEINRS--AEAKGQPLSLPGT--------AEMLSLLLYE 102
+ +G SG +D + S LQ ++ K Q L + A++L + LY
Sbjct: 79 KCIIGSSGMQSDIKTLHSLLQVCYSKKLRKHKKIQLFYLEHSHYPSVHVIAKLLCVTLYS 138
Query: 103 RRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
RR FPYY +L GID GKG +YSYD +G + + G+ + +L
Sbjct: 139 RRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLIL 186
>gi|389584151|dbj|GAB66884.1| proteasome subunit beta type 1 [Plasmodium cynomolgi strain B]
Length = 241
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 10/143 (6%)
Query: 3 EAMLEH---------YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQ 53
EA +EH YV +GGTV+ + G D+ ++A+DTR S + +I + + KI +L ++
Sbjct: 19 EAAVEHGRGFKRWNPYVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRHCPKISKLTDK 78
Query: 54 TAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVL 113
+G SG +D + S L+ +I + A +L ++LY RR FPYY L
Sbjct: 79 CIIGSSGMQSDIKTLHSLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNL 138
Query: 114 LVGIDGTGKGGVYSYDPVG-HCE 135
L G+ KG +Y+YD +G +CE
Sbjct: 139 LAGVSNENKGVLYNYDAIGSYCE 161
>gi|221056989|ref|XP_002259632.1| Proteasome subunit beta type [Plasmodium knowlesi strain H]
gi|193809704|emb|CAQ40406.1| Proteasome subunit beta type, putative [Plasmodium knowlesi strain
H]
Length = 241
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 1/128 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV +GGTV+ + G D+ ++A+DTR S + +I + KI +L ++ +G SG +D +
Sbjct: 34 YVDNGGTVIGVTGKDYVILAADTRLSLSYSIYTRYCPKISKLTDKCIIGSSGMQSDIKTL 93
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
S L+ +I G + A +L ++LY RR FPYY LL G+ KG +Y+Y
Sbjct: 94 HSLLKKKIELFVLEHGHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVSNDNKGVLYNY 153
Query: 129 DPVG-HCE 135
D +G +CE
Sbjct: 154 DAIGSYCE 161
>gi|414886157|tpg|DAA62171.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 228
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 6/142 (4%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L ++ + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L GKG V++Y
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVL------GKGCVFTY 122
Query: 129 DPVGHCEKVAYRLHGTSAKFML 150
D VG E+ Y GT + ++
Sbjct: 123 DAVGSYERTGYSAQGTGSTLIM 144
>gi|303390057|ref|XP_003073260.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
ATCC 50506]
gi|303302405|gb|ADM11900.1| 20S proteasome subunit beta type-1 [Encephalitozoon intestinalis
ATCC 50506]
Length = 287
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y + GT + + DF ++A DTR SS+ I S KIFR+ N G +G
Sbjct: 77 EEKFNPYEDNSGTTVCLKQDDFIIVAGDTRHSSDMVINSREMSKIFRMGNFLLTG-TGFY 135
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD+ EV ++ EI E G P+S+ +A +LS +LY RR FPYY L G + GK
Sbjct: 136 ADTYEVYRKMTDEI-LQYEVDG-PMSIHSSANLLSKILYSRRFFPYYSFCTLSGFE-KGK 192
Query: 123 GGVYSYDPVG 132
+Y YDP+G
Sbjct: 193 AYLYQYDPLG 202
>gi|429962010|gb|ELA41554.1| hypothetical protein VICG_01418 [Vittaforma corneae ATCC 50505]
Length = 275
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT + + + +IASDTR SS+ TI S KIF++ + + +G ADS EV
Sbjct: 73 YENNGGTSLVVTTDNKIIIASDTRHSSDYTINSRKMTKIFKI-GEFYLATTGFFADSFEV 131
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ L ++ + E + ++L A +L LLY +R FPYY +L G D G VYSY
Sbjct: 132 YTNLMYQV-KQYETYSR-ITLKALAHLLHNLLYSKRFFPYYSYAILCGFDN-GTATVYSY 188
Query: 129 DPVGHCEKVAYRLHGTSA 146
DPVG +K R +G+S+
Sbjct: 189 DPVGSYDKTRCRCNGSSS 206
>gi|190408868|gb|EDV12133.1| proteasome subunit [Saccharomyces cerevisiae RM11-1a]
Length = 242
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y +GGT++ IAG DFA++A DTR+ ++ +I S + K+F + + +G
Sbjct: 18 EHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFA 77
Query: 63 ADSLEVVSRLQAEIN--RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT 120
AD +V R + + + + + + E + R FPYYV ++ G+D
Sbjct: 78 ADGDALVKRFKNSVKWYHFGPQRQKIIYKLCSKEYSTSSGTGRGFFPYYVHTIIAGLDED 137
Query: 121 GKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
GKG VYS+DPVG E+ R G +A ++
Sbjct: 138 GKGAVYSFDPVGSYEREQCRAGGAAASLIM 167
>gi|387592573|gb|EIJ87597.1| hypothetical protein NEQG_02144 [Nematocida parisii ERTm3]
gi|387595200|gb|EIJ92825.1| hypothetical protein NEPG_02224 [Nematocida parisii ERTm1]
Length = 242
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 1/145 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GT ++I G DF ++ASDTR S+ I + + K F L + + +G ADS V
Sbjct: 32 YGDNSGTSLSIIGADFCVVASDTRHSAPYNINTRHATKSFCLDGRFILSTTGFYADSRFV 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ L +I++ + + + A +L +LLY+ R FP + LVG + K ++SY
Sbjct: 92 YTELAYQIDKYQFKYNKKMGIEQAAALLHVLLYKHRFFPKFTYCCLVGFNEEEKPKIFSY 151
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASM 153
DPVG ++ R +G S ML M
Sbjct: 152 DPVGSYQETPCRCNG-SGTTMLQPM 175
>gi|145520811|ref|XP_001446261.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413738|emb|CAK78864.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GTV+AI P L+A DTR S+ I++ + K+ +L ++ + +G AD + +
Sbjct: 32 YHDNSGTVLAIGIPGAVLVAGDTRLSNGYNILTRDATKLSQLTDKCVLATAGQYADFIAL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
LQ + S A +LS LY RR FPYY LL G+D G VY Y
Sbjct: 92 RKFLQQRLQLYEFQNEVQASTQTVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGY 151
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYES 162
D +G +++ Y + G+ + ++A + L Y
Sbjct: 152 DAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNK 185
>gi|320582525|gb|EFW96742.1| Beta 6 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 226
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 68/127 (53%)
Query: 24 FALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAK 83
F DTRS+S +I + + K+F + N + +G ADS +++ + ++
Sbjct: 25 FNPYTGDTRSTSGYSINTRYEPKVFDVGNNLLLTANGFAADSAQLIKVFKNQLEWYHFDH 84
Query: 84 GQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHG 143
+P+S A + LLY +R FPYYV +L G+D GKG +YS+DPVG E+ R G
Sbjct: 85 NKPMSTQSAARFIQHLLYGKRFFPYYVHTILGGLDEEGKGAIYSFDPVGSYEREQCRAGG 144
Query: 144 TSAKFML 150
+A ++
Sbjct: 145 AAASLIM 151
>gi|296413676|ref|XP_002836535.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630362|emb|CAZ80726.1| unnamed protein product [Tuber melanosporum]
Length = 257
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRL--PNQTAVGIS 59
T+ Y +GGT++ I G DF ++A DTR +S I S + K++RL N +
Sbjct: 29 TQHSFNPYTDNGGTIIGITGEDFVVLAGDTRHTSGYNINSRTEKKVYRLGEDNSLVLATV 88
Query: 60 GNMADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
G ADS +V + +N + +S+ A+ LS LY R FP Y +L G+D
Sbjct: 89 GFGADSKDVAETMMRAVNDFKFNHNLKNMSVSAAAQYLSTFLYGNRFFPKYANCVLAGLD 148
Query: 119 GTGKGGVYSYDPVGHCEK 136
G+ +YSYD VG K
Sbjct: 149 KDGRARLYSYDSVGSYSK 166
>gi|145483595|ref|XP_001427820.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145552816|ref|XP_001462083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394903|emb|CAK60422.1| unnamed protein product [Paramecium tetraurelia]
gi|124429921|emb|CAK94710.1| unnamed protein product [Paramecium tetraurelia]
Length = 239
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GTV+A+ P ++A DTR S+ I+S + K+ +L ++ + +G AD + +
Sbjct: 32 YHDNSGTVLAVGIPGAVIVAGDTRLSNGYNILSRDATKLSQLTDKCVLATAGQYADFIAL 91
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
LQ + S A +LS LY RR FPYY LL G+D G VY Y
Sbjct: 92 RKFLQQRLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDENNHGVVYGY 151
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYES 162
D +G +++ Y + G+ + ++A + L Y
Sbjct: 152 DAIGSYDQMTYGVQGSGQELVVAVLDNQLKGYNK 185
>gi|396081771|gb|AFN83386.1| 20S proteasome subunit beta type-1 [Encephalitozoon romaleae
SJ-2008]
Length = 289
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 4/136 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GTV+ + DF +I DTR SS+ I S KIF++ + G +G ADS EV
Sbjct: 85 YEDNSGTVVCLRQDDFIVIGGDTRHSSDMIINSREMTKIFQIGDLFLTG-TGFYADSHEV 143
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ EI R E +G +++ A +LS +LY +R FPYY +L G + G+ VYSY
Sbjct: 144 YVKMAYEI-RQYEVEG-SINVHSAANLLSKILYSKRFFPYYSYCVLSGFE-NGRPYVYSY 200
Query: 129 DPVGHCEKVAYRLHGT 144
DPVG E V +G+
Sbjct: 201 DPVGSFESVTCICNGS 216
>gi|312375789|gb|EFR23090.1| hypothetical protein AND_13702 [Anopheles darlingi]
Length = 219
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 87 LSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSA 146
+S P A+MLS+L+Y RR FPYYV +L G+D GKG VYSYDP+GHCE YR G++
Sbjct: 45 MSTPAVAQMLSILMYNRRFFPYYVSNVLAGLDLNGKGVVYSYDPIGHCEMTTYRAGGSAG 104
Query: 147 KFM 149
+
Sbjct: 105 PLL 107
>gi|195440110|ref|XP_002067892.1| GK22295 [Drosophila willistoni]
gi|194163977|gb|EDW78878.1| GK22295 [Drosophila willistoni]
Length = 212
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVS-NNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
GGT++AIAG DFA IA DTR +++ I +Q K+F + QT +G G D+L ++S
Sbjct: 11 GGTLVAIAGNDFATIACDTRLTNDFNIRKMRSQSKLFDVSPQTVLGSVGCWCDTLALLSL 70
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+++ + P+ A ML+ R+ Y+V ++ GID G G VY DP+
Sbjct: 71 VRSFSLKYELDNLMPVCPDSLASMLTRTKLTRQ---YFVSTVVTGIDSNGLGAVYFNDPI 127
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G+ ++ Y + GT + +L ++++ +E D+ + IT +L
Sbjct: 128 GNYLRLPYHISGTGGRIILPTLNWFEG---NEEDHMNAITTSL 167
>gi|326428761|gb|EGD74331.1| proteasome subunit beta type-1 [Salpingoeca sp. ATCC 50818]
Length = 180
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 57/98 (58%)
Query: 52 NQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ 111
++T + +G D L +V R+ + +P+S P A+ML+ +LY +R FPYY
Sbjct: 5 DKTVLASAGFHGDVLTLVKRIGVRMQNYEYQHRKPMSTPACAQMLATMLYGKRFFPYYTY 64
Query: 112 VLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
+L G+D GKG V+SYDPVG E+ YR GT++ +
Sbjct: 65 NILAGLDADGKGCVFSYDPVGSYEREHYRAAGTASALL 102
>gi|440491899|gb|ELQ74504.1| 20S proteasome, regulatory subunit beta type PSMB1/PRE7
[Trachipleistophora hominis]
Length = 243
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GTV+A D+ +IA+DTR SS I S KIF G +G AD EV
Sbjct: 35 YANNSGTVLAFKQQDYVIIAADTRHSSEMGINSRKMTKIFEFDGFIFSG-TGFYADLNEV 93
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRI-FPYYVQVLLVGIDGTGKGGVYS 127
RL+ E+ R + + + A L +LY RR YYV +LVG D TG+ +YS
Sbjct: 94 YFRLRYEVERYENEVEKRIGISALAHKLLNILYSRRGGLIYYVFSVLVGKDETGEPVLYS 153
Query: 128 YDPVGHCEKVAYRLHGTSA 146
+DP+G E+V + +G+++
Sbjct: 154 FDPIGSYEQVMCKCYGSAS 172
>gi|71725697|gb|AAZ38994.1| proteasome-like protein [Oxyuranus scutellatus]
Length = 174
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 62/104 (59%)
Query: 46 KIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRI 105
K ++L + T +G SG D L + + L+A + + + +S A MLS +LY RR
Sbjct: 3 KCYKLTDTTVIGCSGFHGDCLTLTTILEARLKMYKHSNNKIMSSGAIAAMLSTILYSRRF 62
Query: 106 FPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
FPYYV ++ G+D GKG VYS+DPVG ++ +++ G+++ +
Sbjct: 63 FPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAML 106
>gi|401887735|gb|EJT51714.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 2479]
Length = 251
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%)
Query: 26 LIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQ 85
+IA DTR S I + K+F+L ++ + +G AD R++ + +
Sbjct: 22 VIAGDTRQSQGYNIQTRYAKKVFQLTDKVVLATNGFAADGNNFYKRVKQRLEWYEANHHK 81
Query: 86 PLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTS 145
+S+ A M+ +LY RR FPYYV +L GI+ G G VYS+DPVG E+ A R G +
Sbjct: 82 QMSIKSIARMIQTMLYGRRFFPYYVYNILGGIEEDGTGAVYSFDPVGSYEREACRAAGAA 141
>gi|429965201|gb|ELA47198.1| hypothetical protein VCUG_01298 [Vavraia culicis 'floridensis']
Length = 242
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GTV+A D+ +IA+DTR SS I S KIF G +G AD EV
Sbjct: 34 YANNSGTVLAFKQQDYVMIAADTRHSSVMGINSRKMTKIFEFDGFVFSG-TGFYADLNEV 92
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTA-EMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
RL+ E+ + + +S+ A ++L++L RR YYV +L+G D TG +YS
Sbjct: 93 YFRLRYEVEKYENEIERRISIRALAHKLLNILYSRRRGLIYYVFCVLIGKDETGDPVLYS 152
Query: 128 YDPVGHCEKVAYRLHGTSA 146
+DP+G E+ R +G+++
Sbjct: 153 FDPIGSYEQTMCRCYGSAS 171
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 23 DFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEA 82
D ++A+DTR +S + K+F L A+ I+G +AD+ ++ ++A IN
Sbjct: 23 DAVVVATDTRVTSGFFVAHRRGKKVFPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 82
Query: 83 KGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLH 142
+GQ +SLP A + S L++ R FP+Y Q++L G+D G +Y+ DP G +
Sbjct: 83 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 141
Query: 143 GTSAKFMLASMSYLLSP-YESEFDYTDVITMALEELTPVVK 182
G+ + +L P Y + D+ + +A + ++ ++
Sbjct: 142 GSGSPVAYG----VLEPNYREDMDFNSAVELAFQAVSAAIR 178
>gi|406699677|gb|EKD02876.1| 20S proteasome beta-type subunit, Pre7p [Trichosporon asahii var.
asahii CBS 8904]
Length = 251
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%)
Query: 26 LIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQ 85
+IA DTR S I + K+F+L ++ + +G AD R++ + +
Sbjct: 22 VIAGDTRQSQGYNIQTRYAKKVFQLTDKVVLATNGFAADGNNFYKRVKQRLEWYEANHHK 81
Query: 86 PLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTS 145
+S+ A M+ +LY RR FPYYV +L GI+ G G +YS+DPVG E+ A R G +
Sbjct: 82 QMSIKSIARMIQTMLYGRRFFPYYVYNILGGIEEDGTGAIYSFDPVGSYEREACRAAGAA 141
>gi|195421055|ref|XP_002060834.1| GK20619 [Drosophila willistoni]
gi|194156919|gb|EDW71820.1| GK20619 [Drosophila willistoni]
Length = 229
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVS-NNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
GGT++AIAG DFA IA DTR +++ I +Q K+F + QT +G G D+L ++S
Sbjct: 28 GGTLVAIAGNDFATIACDTRLTNDFNIRKMRSQSKLFDVSPQTVLGSVGCWCDTLALLSL 87
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+++ + P+ A ML+ + R+ Y+V ++ GID G G VY DP
Sbjct: 88 VRSYSLKYELDNLMPVCPDSLASMLTRTKFTRQ---YFVSSVVAGIDSNGLGAVYFNDPS 144
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G+ ++ Y + GT + +L ++ + +E D + IT +L
Sbjct: 145 GNYLRLPYHISGTGGRIILPTLDWFEG---NEEDQMNAITTSL 184
>gi|302841986|ref|XP_002952537.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
gi|300262176|gb|EFJ46384.1| hypothetical protein VOLCADRAFT_62543 [Volvox carteri f.
nagariensis]
Length = 212
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
TV+A+AG D+ ++A TR S+ +I++ + + +L ++ V +G AD + LQ
Sbjct: 14 TVVAVAGEDYCIVAGSTRMSTGFSILTRDASMLLQLTDKVVVASAGMQADRKALHKLLQH 73
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHC 134
G+ + + A++LS LY R FP Y L+ G+D G+G VY+YD +G
Sbjct: 74 RNVTYQHNHGRAMGVSAAAQLLSNTLYYNRFFPLYTFNLVAGLDEQGRGAVYNYDAIGSY 133
Query: 135 EKVAYRLHGTSAKFM 149
E+ Y G+ + +
Sbjct: 134 ERSGYFCQGSGKELI 148
>gi|359473811|ref|XP_002264176.2| PREDICTED: proteasome subunit beta type-1-like [Vitis vinifera]
Length = 149
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG+ +AIAG D+ +I S TR S I++ + KI +L ++ + SG
Sbjct: 5 QANWSLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMASSGFQ 64
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L A + +S P A++LS LY +R FPYY +L G+D GK
Sbjct: 65 ADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 124
Query: 123 GGVYSYDPVGHCEKVA 138
G + +D V + + +A
Sbjct: 125 GWRWRFDIVFYMQHMA 140
>gi|68065946|ref|XP_674957.1| proteasome subunit beta type 1 [Plasmodium berghei strain ANKA]
gi|56493858|emb|CAI00630.1| proteasome subunit beta type 1, putative [Plasmodium berghei]
Length = 267
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 34/183 (18%)
Query: 2 TEAMLEH---------YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPN 52
EA +EH Y+ +GGTV+ + G ++ ++A DTR S + +I + N KI ++ +
Sbjct: 19 NEAAIEHARPSKRWNPYIDNGGTVIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITD 78
Query: 53 QTAVGISGNMADSLEVVSRLQAEI-----------------NRSAEAKGQPLSLPGT--- 92
+ +G SG +D + S LQ + ++ + K Q L +
Sbjct: 79 KCIIGSSGMQSDIKTLHSLLQVLLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYP 138
Query: 93 -----AEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAK 147
A++L + LY RR FPYY +L GID GKG +YSYD +G + + G+ +
Sbjct: 139 SIHVIAKLLCVTLYSRRFFPYYTFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSS 198
Query: 148 FML 150
+L
Sbjct: 199 LIL 201
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 23 DFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEA 82
D ++A+DTR +S + K+ L A+ I+G +AD+ ++ ++A IN
Sbjct: 26 DAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 85
Query: 83 KGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHC--EKVAYR 140
+GQ +SLP A + S L++ R FP+Y Q++L G+D G +Y+ DP G EK+
Sbjct: 86 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 144
Query: 141 LHGTSAKFMLASMSYLLSP-YESEFDYTDVITMALEELTPVVK 182
G+ + +L P Y + D+ + +A + ++ ++
Sbjct: 145 GSGSPVAYG------VLEPNYREDMDFNSAVELAFQAVSAAIR 181
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 10/163 (6%)
Query: 23 DFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEA 82
D ++A+DTR +S + K+ L A+ I+G +AD+ ++ ++A IN
Sbjct: 23 DAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQIM 82
Query: 83 KGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHC--EKVAYR 140
+GQ +SLP A + S L++ R FP+Y Q++L G+D G +Y+ DP G EK+
Sbjct: 83 RGQVMSLPAVARLTSSLMFSSRYFPFYAQLILAGVDNEGP-HLYNLDPFGSVTEEKLIAT 141
Query: 141 LHGTSAKFMLASMSYLLSP-YESEFDYTDVITMALEELTPVVK 182
G+ + +L P Y + D+ + +A + ++ ++
Sbjct: 142 GSGSPVAYG------VLEPNYREDMDFNSAVELAFQAVSAAIR 178
>gi|414886160|tpg|DAA62174.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 152
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGT +AIAG D+ ++A+DTR S +I++ + KI L ++ + SG D +
Sbjct: 9 YENNGGTCVAIAGADYCVVAADTRLSVGYSILTRDHSKICDLADKCVLASSGFQGDIKAL 68
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L A + +S P A++LS LY +R FPYY +L G+D GK +++
Sbjct: 69 HKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKVCCFTF 128
Query: 129 DPV--GHCEKVAYRLHGTSAKFML 150
+ H K LH F L
Sbjct: 129 SHLLFEHSSKHVVHLHRERVCFHL 152
>gi|72162191|ref|YP_289848.1| proteasome subunit beta [Thermobifida fusca YX]
gi|123629303|sp|Q47NZ4.1|PSB_THEFY RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|71915923|gb|AAZ55825.1| bacterial proteasome, beta component. Threonine peptidase. MEROPS
family T01B [Thermobifida fusca YX]
Length = 282
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 8/175 (4%)
Query: 8 HYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
H T++A+ ++A D R++S I + + K+FR +AVGI+G+ +E
Sbjct: 49 HLTPEATTIVAVVFSGGVVLAGDRRATSGNVIANRDMDKLFRTDEFSAVGIAGSAGIGIE 108
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGIDGT-GKG 123
+ Q E+ + +G+PLSL G A L+ ++ + + V LLVG D + G+G
Sbjct: 109 LAKLFQVELEHYEKREGRPLSLEGKANRLATMIRSNLGLAMQGFVVVPLLVGYDTSRGEG 168
Query: 124 GVYSYDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++SYDPVG C E+ Y G+ + + ++ L Y + TD +AL+ L
Sbjct: 169 RIFSYDPVGGCYEEHRYHAIGSGSVYAKGALKKL---YRDDLAETDAALVALQAL 220
>gi|159488463|ref|XP_001702229.1| hypothetical protein CHLREDRAFT_133001 [Chlamydomonas reinhardtii]
gi|158271266|gb|EDO97089.1| predicted protein [Chlamydomonas reinhardtii]
Length = 245
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A Y +GGTV+A+AG D+ ++A+ TR S+ +I++ + +L Q+ G
Sbjct: 29 AAWSPYDDNGGTVVAVAGEDYCIVAASTRMSTGFSILTREATMMLQLGPQSRQ--VGRGR 86
Query: 64 DSLEVVSRLQAEINRSAEAKG----QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG 119
+ L V RL + KG + L G +LS LY +R FP+Y L G+D
Sbjct: 87 EGLMHVRRLAGVVCGRRLKKGWDQDKEAELWGAGRLLSNTLYYKRFFPFYTFNLCAGLDE 146
Query: 120 TGKGGVYSYDPVGHCEKVAYRLH--GTSAKFM 149
G+G VY+YD +G E+ Y G S +F+
Sbjct: 147 QGRGAVYNYDAIGSYERSGYFCQGFGRSRRFL 178
>gi|340507845|gb|EGR33723.1| proteasome subunit beta type 1, putative [Ichthyophthirius
multifiliis]
Length = 203
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
YV + GTV AI G F ++A DTR S +I+S K+ +L + + SG AD + +
Sbjct: 38 YVFNAGTVCAIGGKGFVIVAGDTRLSQGYSIISRENSKLCKLSDNVYLATSGMYADFVAL 97
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---------------RIFPYYVQVL 113
+LQ+ + + S+ + +LS LY + R FPYY L
Sbjct: 98 SKQLQSRLQMYQYNNQKQASMKAISTLLSRTLYYKRYIYFIINFINKYIYRFFPYYTFNL 157
Query: 114 LVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
L G D G G V YD VG + Y + G+ A+ ++
Sbjct: 158 LAGFDNQGNGQVIGYDAVGSGDFKQYAVLGSGAQLIV 194
>gi|300702270|ref|XP_002995154.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
gi|239604000|gb|EEQ81483.1| hypothetical protein NCER_102070 [Nosema ceranae BRL01]
Length = 282
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 4/147 (2%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
E Y + GT +AI D ++A+DTR S I S N KI+ + + V I+G
Sbjct: 73 EPQFNPYEDNSGTAVAIKLNDLIIVAADTRHCSEMGIYSRNTPKIYYIGDY-LVTITGFY 131
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD +E+++ L+ ++ +S+ A + S ++Y +R+FPYY V L G G+
Sbjct: 132 ADGIELINILKYQV--LLYESFNKISIHSLANLASKVMYSKRLFPYYSYVTLSGF-CDGE 188
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFM 149
VYS+D +GH EKV+ +G+ A F+
Sbjct: 189 PFVYSFDCLGHFEKVSTVCNGSGASFI 215
>gi|296088721|emb|CBI38171.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A Y +GG+ +AIAG D+ +I S TR S I++ + KI +L ++ + SG
Sbjct: 93 QANWSLYNNNGGSCVAIAGADYCVITSGTRMSIGYNILTCDYSKICKLADKCVMASSGFQ 152
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
AD + L A + +S P A++LS LY +R FPYY +L G+D GK
Sbjct: 153 ADVRALQKHLAARQLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSFNVLGGLDNEGK 212
Query: 123 GGV 125
G V
Sbjct: 213 GWV 215
>gi|119567808|gb|EAW47423.1| proteasome (prosome, macropain) subunit, beta type, 1, isoform
CRA_d [Homo sapiens]
Length = 205
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%)
Query: 52 NQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ 111
++T +G SG D L + ++A + + + ++ A MLS +LY RR FPYYV
Sbjct: 40 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 99
Query: 112 VLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
++ G+D GKG VYS+DPVG ++ +++ G+++ +
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAML 137
>gi|395738001|ref|XP_003777017.1| PREDICTED: proteasome subunit beta type-1 isoform 2 [Pongo abelii]
Length = 205
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%)
Query: 52 NQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ 111
++T +G SG D L + ++A + + + ++ A MLS +LY RR FPYYV
Sbjct: 40 DKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVY 99
Query: 112 VLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
++ G+D GKG VYS+DPVG ++ +++ G+++ +
Sbjct: 100 NIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAML 137
>gi|308321183|gb|ADO27744.1| proteasome subunit beta type-3 [Ictalurus furcatus]
Length = 205
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G D IASD R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDQ 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT A+ M L P D + I+ A+
Sbjct: 127 IG-CPMITEDFVVSGTCAEQMYGMCESLWEPDMGPEDLFETISQAM 171
>gi|242018983|ref|XP_002429948.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
gi|212514994|gb|EEB17210.1| proteasome subunit beta type, putative [Pediculus humanus corporis]
Length = 190
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+GG V+A+ G + IASD R +S N KIF + VG+ G D+ V
Sbjct: 6 HNGGAVVAVTGKNCVAIASDRRFGVGAQTISCNFQKIFEMGPHLYVGLPGLATDTQTVYQ 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYD 129
RL+ +N +G+ ++ + M+S LLYERR PY+V+ ++ G+D TGK V + D
Sbjct: 66 RLRFRLNLYELKEGRKIAPKTFSHMMSNLLYERRFGPYFVEPVVAGLDPTTGKPFVCNMD 125
Query: 130 PVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT ++ + L P + +V++ AL
Sbjct: 126 LIG-CPNMPEDFVVAGTCSEQLYGMCETLWEPNLEPDELFEVVSQAL 171
>gi|160331789|ref|XP_001712601.1| prsB6 [Hemiselmis andersenii]
gi|159766050|gb|ABW98276.1| prsB6 [Hemiselmis andersenii]
Length = 251
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
Y +GGTV+ I+ +F+LIASDTR S + + +I ++ + + +G +D
Sbjct: 41 FNFYQNNGGTVLGISTKNFSLIASDTRFSFGMALPTRTTTRIIKISSNIILASAGMYSDI 100
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+ + +Q I + + + A LS +LY +R FPYY LL G++ +G +
Sbjct: 101 FFLQNLIQIGIKKFKTENLEKCLISSCAFYLSYILYSKRFFPYYSFNLLAGLEKNREGSI 160
Query: 126 YSYDPVGHCEKVA 138
+ +D +G EK +
Sbjct: 161 FCFDAIGSFEKTS 173
>gi|323448836|gb|EGB04730.1| hypothetical protein AURANDRAFT_32152 [Aureococcus anophagefferens]
Length = 219
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG++ A +G DF L+A+D++ TI S + L N A+G SG +AD +
Sbjct: 15 YTNNGGSLAAASGHDFTLLAADSQLVHGMTIASTVFERTSALGNLAALGTSGCVADCDSL 74
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+ E R + A++ S ++Y RR FPYY +LL G+D G G V +
Sbjct: 75 SHDLRMEAERYFWGAEMSMEASVAAQVCSQMMYARRAFPYYASLLLCGLDRFGTGRVCVF 134
Query: 129 DPVG 132
D G
Sbjct: 135 DSFG 138
>gi|417397057|gb|JAA45562.1| Putative proteasome subunit beta type-3 [Desmodus rotundus]
Length = 205
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G D IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKDCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+P+ M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRPIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|318102146|ref|NP_001188163.1| proteasome subunit beta type-3 [Ictalurus punctatus]
gi|308323613|gb|ADO28942.1| proteasome subunit beta type-3 [Ictalurus punctatus]
Length = 205
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G D IASD R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMRGKDCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT A+ M L P D + I+ A+
Sbjct: 127 IG-CPMITEDFVVSGTCAEQMYGMCESLWEPDMGPEDLFETISQAM 171
>gi|403511523|ref|YP_006643161.1| proteasome, beta subunit [Nocardiopsis alba ATCC BAA-2165]
gi|402801094|gb|AFR08504.1| proteasome, beta subunit [Nocardiopsis alba ATCC BAA-2165]
Length = 272
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 8/181 (4%)
Query: 2 TEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
T ++EH T++A+ P L+A D R++ I + + K++R +AV I+G+
Sbjct: 33 TGGVVEHLTPDATTIVALTFPGGVLLAGDRRATQGNVIANRDMDKLYRTDEYSAVAIAGS 92
Query: 62 MADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID 118
+E+ Q E+ + +G+ LSL G A L+ ++ + + V LLVG D
Sbjct: 93 AGIGIELARLYQVELEHYEKLEGRSLSLEGKANKLAQMVRGNLGMAMQGFVVIPLLVGYD 152
Query: 119 -GTGKGGVYSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
TG+G V+SYD G E+ Y G+ + F S+ L Y + D T I +ALE
Sbjct: 153 EATGQGRVFSYDAAGGRYEEQRYHSIGSGSVFAKGSIKKL---YRDDLDETTAIKVALES 209
Query: 177 L 177
L
Sbjct: 210 L 210
>gi|19074564|ref|NP_586070.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
gi|74630117|sp|Q8SRH6.1|PSB6_ENCCU RecName: Full=Probable proteasome subunit beta type-6; AltName:
Full=26S proteasome beta-type subunit PRE7; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE7
gi|19069206|emb|CAD25674.1| 20S PROTEASOME ALPHA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 290
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ Y + GT + + DF ++A DTR SS+ I S KIF++ + G +G AD+
Sbjct: 83 FDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFYADT 141
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
EV ++ EI R E +++ A +LS +LY +R FPYY +L G + GK V
Sbjct: 142 HEVYVKMVYEI-RQYEVD-DSINIHSAANLLSKILYSKRFFPYYSFCVLSGFE-KGKPYV 198
Query: 126 YSYDPVG 132
YSYDP+G
Sbjct: 199 YSYDPIG 205
>gi|449329565|gb|AGE95836.1| 20S proteasome alpha-type subunit [Encephalitozoon cuniculi]
Length = 290
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ Y + GT + + DF ++A DTR SS+ I S KIF++ + G +G AD+
Sbjct: 83 FDPYEDNSGTTICLKQGDFIVVAGDTRHSSSMVINSREMSKIFQVGDFLLTG-TGFYADT 141
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
EV ++ EI R E +++ A +LS +LY +R FPYY +L G + GK V
Sbjct: 142 HEVYVKMVYEI-RQYEVD-DSINIHSAASLLSKILYSKRFFPYYSFCVLSGFE-KGKPYV 198
Query: 126 YSYDPVG 132
YSYDP+G
Sbjct: 199 YSYDPIG 205
>gi|336272341|ref|XP_003350927.1| hypothetical protein SMAC_04232 [Sordaria macrospora k-hell]
gi|380090694|emb|CCC04864.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 151
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 84 GQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHG 143
G+P+S+ A+ LS +LY++R FPYYV +L G+D GKG VYSYDPVG E+ R G
Sbjct: 7 GKPMSVKACAQRLSTILYQKRFFPYYVYAILGGLDEEGKGAVYSYDPVGSYEREQCRAGG 66
Query: 144 TSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
+A ++ + ++ ++++++ + AL+E
Sbjct: 67 AAASLIMPFLDNQVN-FKNQYEPGSGVGHALQE 98
>gi|62858119|ref|NP_001016503.1| proteasome beta 3 subunit [Xenopus (Silurana) tropicalis]
gi|163916422|gb|AAI57195.1| proteasome (prosome, macropain) subunit, beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 205
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +MA+ G D IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYERR PYY++ ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C E + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+E + HG T + I D ++ +D R+S+ I +NN +KI ++ + + ++G +AD+
Sbjct: 5 VEEKILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+V L+ N K P+S+ A + SL+ ++ R +P+ +L+ G D G +
Sbjct: 65 QNIVDILRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDAEGP-AL 123
Query: 126 YSYDPVGHCEKVAYRLHGTSA 146
++ D G EK AY G+ +
Sbjct: 124 FNIDMFGSVEKKAYVTTGSGS 144
>gi|384501018|gb|EIE91509.1| hypothetical protein RO3G_16220 [Rhizopus delemar RA 99-880]
Length = 204
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IA+D R + VS KIF+ +T +G+ G D + + R
Sbjct: 7 NGGSVVAMVGKDCVAIAADKRLGAQFMTVSTEFQKIFKATEKTLIGLPGLATDVITLADR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ + N + + + A M+S LYERR PY+V+ ++ G+D K + S D +
Sbjct: 67 FRFKTNMYKMREEREIEPKALAHMVSSTLYERRFGPYFVEPVIAGLDKHNKPFICSMDLI 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C A + + GT+ + L P D + I+ AL
Sbjct: 127 G-CINFAKDFVVSGTAGPNLYGMCESLWEPDLEPEDLFETISQAL 170
>gi|291230976|ref|XP_002735446.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 180
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 85 QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGT 144
+ +S P A M+S +LY RR FPYYV ++ G+D GKG VYSYDPVG E+ +YR G+
Sbjct: 48 KEMSCPAIAAMISTILYYRRFFPYYVYNIVAGLDTEGKGCVYSYDPVGSYERESYRSAGS 107
Query: 145 SAKFM 149
++ +
Sbjct: 108 ASAML 112
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T + + D ++A+D R+++ I KI ++ ++ A+ +G +AD+ +
Sbjct: 18 HGTTTVGLIAKDAVILAADRRATAGTFIAHRKTRKILKITDKMALTTAGLVADAQVLADW 77
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L ++N K QP+++ A +LSLLLY ++FP+YVQ++L G D + ++S D
Sbjct: 78 LNTQMNYLTITKKQPVTVREAAHLLSLLLYRYKLFPFYVQLILGGYDTAPR--LFSLDLY 135
Query: 132 GHCEKVAYRLHGTSAKFMLASMS----YLLSPYESEFDYTDVITMALEE 176
G + Y G+ + + + +SP E+ + MAL+
Sbjct: 136 GSLVEEKYTSTGSGSPIAIGVLEDGYRENMSPEEARKLAVKAVQMALKR 184
>gi|224007805|ref|XP_002292862.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
pseudonana CCMP1335]
gi|220971724|gb|EED90058.1| 26S proteasome subunit beta type 1-like protein [Thalassiosira
pseudonana CCMP1335]
Length = 219
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVS---NNQLKIFRLPNQTAVGISGNM 62
+ Y +GG V A+AG D+ +IASDTR + G ++ N QL+ LP +G +G
Sbjct: 2 FDPYQLNGGLVAAVAGKDYVIIASDTRLTDGGYGINSRRNIQLQQTNLP--VMIGSAGCA 59
Query: 63 ADSLEVVSRLQAEINRSAEAK--GQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-- 118
+D + R++ E++ S E + + A +L +LY RR FP+Y ++ GID
Sbjct: 60 SDCESLKRRVRLELD-SLECNFPSGKMGVQSVANLLQQVLYGRRGFPFYSFCVVAGIDRD 118
Query: 119 ------GTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
G G VY YD +G E+VA GT + +
Sbjct: 119 EQTGDSKCGMGAVYVYDAIGSFERVAVGSAGTGRELL 155
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D + AS+ R++ I KIF++ A ++G++ D+ ++V
Sbjct: 8 KGTTTVGIVCKDGIVFASEKRATLGNLIAHKAVDKIFKIDEHLATTVAGSVGDAQKLVEY 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE+ G+P ++ A + S +L+ R+FP+ VQ+L+ GID TG +YS DP
Sbjct: 68 LKAEVRLYKLRTGKPATVRAAASIASNILHASRMFPFIVQMLIGGIDETGP-KIYSVDPA 126
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + Y G+ + + L Y+ + D I +AL + K
Sbjct: 127 GGKIEDKYVSTGSGSPI---AYGVLEDRYKKDMSVEDAINIALRAIKSSTK 174
>gi|148229244|ref|NP_001088741.1| proteasome (prosome, macropain) subunit, beta type, 3 [Xenopus
laevis]
gi|56270462|gb|AAH87395.1| LOC496005 protein [Xenopus laevis]
Length = 205
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +MA+ G D IA+D R +V+ + KIF + + +G++G D V R
Sbjct: 7 NGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPFICSLDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C E + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|56541012|gb|AAH87457.1| Unknown (protein for MGC:99279) [Xenopus laevis]
Length = 205
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +MA+ G D IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFQPFICSLDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C E + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|348521013|ref|XP_003448021.1| PREDICTED: proteasome subunit beta type-3-like [Oreochromis
niloticus]
Length = 202
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 4 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 64 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 123
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 124 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEPDMEPDDLFETISQAM 168
>gi|225703360|gb|ACO07526.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQVVTTDFQKIFPMGDRLHIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|193788711|ref|NP_001123295.1| proteasome subunit beta type-3 [Danio rerio]
gi|29124577|gb|AAH49010.1| Psmb3 protein [Danio rerio]
Length = 205
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IASD R +V+ + KIF + + +G++G D V R
Sbjct: 7 NGGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPRTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMYGMCESLWEPDMKPEDLFETISQAM 171
>gi|297560457|ref|YP_003679431.1| 20S proteasome subunits A and B [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844905|gb|ADH66925.1| 20S proteasome A and B subunits [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 280
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 7 EHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSL 66
EH T++A+ P L+A D R++ I + + K+FR +AV I+G+ +
Sbjct: 46 EHLTPDATTIVALTFPGGVLLAGDRRATQGNIIANRDMEKVFRTDEYSAVAIAGSAGFGI 105
Query: 67 EVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGK 122
E+ Q E+ + +G+ LSL G A L+ ++ + + V LLVG D TG+
Sbjct: 106 ELARLYQVELEHYEKMEGRSLSLEGKANKLAQMVRGNLGLAMQGFVVVPLLVGYDENTGQ 165
Query: 123 GGVYSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G V+SYD G E+ Y G+ + F ++ L Y + D T +ALE L
Sbjct: 166 GRVFSYDATGGRYEEQRYHSIGSGSVFARGAIKKL---YRDDLDQTGAAKVALEAL 218
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+E + HG T + I D ++ +D R+S+ I +NN +KI ++ + ++G +AD+
Sbjct: 5 VEEKILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDEHAGLTLAGGVADA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+V L+ N K P+S+ A + SL+ ++ R +P+ +L+ G D G +
Sbjct: 65 QNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANGP-AL 123
Query: 126 YSYDPVGHCEKVAYRLHGTSA 146
++ D G EK +Y G+ +
Sbjct: 124 FNIDMFGSVEKKSYVTTGSGS 144
>gi|118431082|ref|NP_147287.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121727671|sp|Q9YES4.2|PSB1_AERPE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|116062408|dbj|BAA79472.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 203
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + I D ++A+D R S G I+S N KIF + ++ + +G D +V +
Sbjct: 5 GATALGIRVEDGVVLAADKRMSYGGFILSRNFKKIFVINDRIGIAFAGLYGDMGGLVRIV 64
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+ ++ ++ G+P ++ A+ LS LLY + FP+ V+ ++ GID G+ +Y DP+G
Sbjct: 65 EGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDPGGEPKLYVLDPLG 124
Query: 133 HCEKVAYRLHGTSA 146
+ Y GT A
Sbjct: 125 SIIEEDYVAAGTGA 138
>gi|156389516|ref|XP_001635037.1| predicted protein [Nematostella vectensis]
gi|156222126|gb|EDO42974.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G + IA+D R VS + KIF++ + VG+ G D + SR
Sbjct: 7 NGAAIIAMVGKNCVAIAADRRLGIQAQTVSCDFQKIFQMGEKLFVGLPGLATDVQTISSR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+P+ M+S LLYERR PY+V+ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELREGRPIKPKTFLSMVSNLLYERRFGPYFVEPVIAGLDPKTNEPFISSMDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C E + + GT ++ M L P D + I+ AL
Sbjct: 127 IG-CPMETKDFVVSGTCSEQMYGMCESLWVPDLEPDDLFETISQAL 171
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+E + HG T + I D ++ +D R+S+ I +NN +KI ++ + + ++G +AD+
Sbjct: 5 VEEKILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+V L+ N K P+S+ A + SL+ ++ R +P+ +L+ G D G +
Sbjct: 65 QNIVDILRYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDTEGP-AL 123
Query: 126 YSYDPVGHCEKVAYRLHGTSA 146
++ D G EK +Y G+ +
Sbjct: 124 FNIDMFGSVEKKSYVTTGSGS 144
>gi|195022115|ref|XP_001985520.1| GH17107 [Drosophila grimshawi]
gi|193899002|gb|EDV97868.1| GH17107 [Drosophila grimshawi]
Length = 254
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT++AI G DFALIASD +S + N +F + Q+ +G G+ D V+ +
Sbjct: 64 GTILAIGGADFALIASDYCMTSE---LDN----LFPMTRQSVMGCIGSWVD----VASMN 112
Query: 74 AEINRSAEAK--GQPLSLPGT--AEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
A I R + + LP A ++S + RR+FP+ +L G+D GKG VY Y+
Sbjct: 113 ALIKRRGQMRELDNRSKLPTEILASIISGTINSRRLFPWRTSTILAGLDVMGKGAVYQYN 172
Query: 130 PVGHCEKVAYRLHGTSAKFMLASMSYLL 157
VG + Y + G++ M +++++
Sbjct: 173 DVGQRGRFLYSVLGSARNIMWPQLNHVI 200
>gi|197632283|gb|ACH70865.1| proteasome (prosome, macropain) subunit, beta type 3 [Salmo salar]
gi|209735862|gb|ACI68800.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|185133100|ref|NP_001117722.1| proteasome subunit beta type-3 [Oncorhynchus mykiss]
gi|6093786|sp|O73817.1|PSB3_ONCMY RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|3063687|gb|AAC14141.1| proteasome subunit C10-11 [Oncorhynchus mykiss]
gi|225705904|gb|ACO08798.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|358057136|dbj|GAA97043.1| hypothetical protein E5Q_03718 [Mixia osmundae IAM 14324]
Length = 204
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IA D R + V+ NQ KIF + T +G+ G +D+L V +
Sbjct: 7 NGGSVIAMLGKDCVAIACDLRLGNQALTVACNQEKIFSITPTTYLGLPGLASDTLTVYEK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ N A + + ++ ++S LYERR PY+++ ++ G++ G V + D +
Sbjct: 67 LRHRTNMYAMREDRLITPTTFTHLVSSTLYERRFGPYFIEPIIAGLEADGTPFVATTDLI 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
G C A + + GT+++ + L P
Sbjct: 127 G-CINAAKDFVVAGTASEKLYGMSEALWEP 155
>gi|256070135|ref|XP_002571401.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646867|emb|CCD58588.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 205
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G V+A++G D A IA D R N +S + K++ L + VG G D+ V
Sbjct: 6 HNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDNQTVFQ 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYD 129
RLQ N + + + MLS LLYERR PY+V+ ++ GID T K V D
Sbjct: 66 RLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPYVACMD 125
Query: 130 PVGH-CEKVAYRLHGTSAKFM 149
+G CE + + GT + M
Sbjct: 126 LIGCVCEANDFVVSGTCTEQM 146
>gi|225705836|gb|ACO08764.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGQQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|410917408|ref|XP_003972178.1| PREDICTED: proteasome subunit beta type-3-like [Takifugu rubripes]
Length = 205
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C E + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMETEDFVVSGTCSEQMYGMCESLWGPDMEPEDLFETISQAM 171
>gi|209733400|gb|ACI67569.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTKDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|195064491|ref|XP_001996575.1| GH21877 [Drosophila grimshawi]
gi|193895395|gb|EDV94261.1| GH21877 [Drosophila grimshawi]
Length = 223
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT++AI G DFA+IASD +S+ + N +F + Q+ +G G+ D V+ +
Sbjct: 33 GTILAIGGVDFAVIASDYCMTSD---LDN----LFPMTRQSVMGCIGSWVD----VASMN 81
Query: 74 AEINRSAEAK--GQPLSLPGT--AEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
A I R + + LP A ++S + RR+FP+ +L G+D GKG VY Y+
Sbjct: 82 ALIKRRGQMRELDNRSKLPTEILASIISSTINSRRLFPWRTSTILAGLDVMGKGAVYQYN 141
Query: 130 PVGHCEKVAYRLHGTSAKFMLASMSYLL 157
VG + Y + G++ M +++++
Sbjct: 142 DVGQRGRFLYSVLGSARNIMWPQLNHVI 169
>gi|256070137|ref|XP_002571402.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646868|emb|CCD58589.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 194
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G V+A++G D A IA D R N +S + K++ L + VG G D+ V
Sbjct: 6 HNGSAVIAMSGKDCAAIACDLRFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDNQTVFQ 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYD 129
RLQ N + + + MLS LLYERR PY+V+ ++ GID T K V D
Sbjct: 66 RLQFRKNMYELRENKTIKPQTITTMLSNLLYERRFGPYFVEPVIAGIDHTTNKPYVACMD 125
Query: 130 PVGH-CEKVAYRLHGTSAKFM 149
+G CE + + GT + M
Sbjct: 126 LIGCVCEANDFVVSGTCTEQM 146
>gi|209737458|gb|ACI69598.1| Proteasome subunit beta type-3 [Salmo salar]
gi|303661230|gb|ADM16027.1| Proteasome subunit beta type-3 [Salmo salar]
Length = 205
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMHGMCESLWEPDMEPEDLFETISQAM 171
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISG 60
M + + Y++ G T + + D +IA+D+R++ + I S K++++ + I+G
Sbjct: 1 MDQKDISRYMK-GTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKIDENLGMTIAG 59
Query: 61 NMADSLEVVS--RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
+ D+ E++ ++Q EI + E K +S A +LS++L E ++ P+YVQ+++ G++
Sbjct: 60 LVGDAQELIRILKIQNEIYKMNERK--QMSPRSAATLLSIILQENKMMPFYVQLIVGGVE 117
Query: 119 GTGKGGVYSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
GKG VY+ D G+ ++ + G+ + L ++ YL Y+ D I +A + L
Sbjct: 118 -DGKGYVYNLDAAGGYTQESRFTATGSGS---LTALGYLEDSYKPGLTTKDAIKIAAKAL 173
>gi|440700487|ref|ZP_20882735.1| proteasome, beta subunit [Streptomyces turgidiscabies Car8]
gi|440276942|gb|ELP65140.1| proteasome, beta subunit [Streptomyces turgidiscabies Car8]
Length = 281
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D GKG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGFDVDRGKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F ++M L S SE D T ++ AL
Sbjct: 172 YDVTGGRSEEHGYAATGSGSIFARSAMKKLYSRELSESDATTLVIQAL 219
>gi|440293947|gb|ELP86994.1| proteasome subunit beta type 1, putative, partial [Entamoeba
invadens IP1]
Length = 173
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%)
Query: 39 IVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSL 98
I++ N KI++L ++ SG AD E+ +L+A+I + +S A++LS
Sbjct: 1 ILTRNSTKIYQLSSKCIFTASGMRADMNELTDQLKAQIKNYRYENNKEMSTEAIAQLLSN 60
Query: 99 LLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGT 144
LY R FPYY +L G+ G+ +Y+YD VG ++VAY G+
Sbjct: 61 TLYSHRFFPYYSFSILTGLSVKGEPLIYNYDAVGSFQEVAYTCSGS 106
>gi|344285957|ref|XP_003414726.1| PREDICTED: proteasome subunit beta type-3-like [Loxodonta africana]
Length = 205
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IASD R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M E + G T + I D ++A+D R+S + + N KI+++ + A+ +GN+ D
Sbjct: 1 MTEKF--KGTTTVGIVCRDGVVLAADRRASLGNMVYAKNVTKIYQIDERLAIAGAGNVGD 58
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
L +V L+AE+ G+ +S A +L+ +L R FPY V L+ G D +
Sbjct: 59 ILSLVRLLRAEVRLYRSRVGRSMSAKALATLLANILNGTRYFPYLVWFLVGGYDDAPR-- 116
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
+YS D G + Y G+ +F + S L S Y+ E + + +A+ + +K
Sbjct: 117 LYSVDMAGGITEDKYVAAGSGMEF---AFSILDSQYKPEMSVEEGVKLAVRAINSAIK 171
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + I D ++AS+ R S G IVS K+F++ ++ + +G AD + L
Sbjct: 9 GATTVGIRVKDGVVLASEKRVSYGGFIVSKAGKKVFKVTDRIGIAFAGLYADMQALARIL 68
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
AEI + G+P + A++LS +LY ++ P+ +VL+ G+D TG +Y DPVG
Sbjct: 69 SAEIQYYEVSTGKPARVYAAAKLLSNILYASKLIPFITEVLVGGVDETGS-HLYVMDPVG 127
Query: 133 HCEKVAYRLHGTSAKFML 150
+ Y G+ A +
Sbjct: 128 SVIEDDYAALGSGAAIAI 145
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+E + HG T + I D ++ +D R+S+ I +NN +KI ++ + ++G +AD+
Sbjct: 5 VEEKILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDAHAGLTLAGGVADA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+V L+ N K P+S+ A + SL+ ++ R +P+ +L+ G D G +
Sbjct: 65 QNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDANGP-AL 123
Query: 126 YSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVV 181
++ D G E+ +Y G+ + + L Y S+ + +AL + +
Sbjct: 124 FNIDMFGSVEQKSYVTTGSGSP---VAYGLLEEEYRSDLTVEEAKKIALRAVKAAI 176
>gi|302595920|sp|A0RXV1.2|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 210
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+E + HG T + I D ++ +D R+S+ I +NN +KI R+ + + ++G +AD+
Sbjct: 5 VEEKILHGTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+V L+ + K P+ + A + SL+ ++ R +P+ +L+ G D G +
Sbjct: 65 QNIVDVLRYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAVGP-AL 123
Query: 126 YSYDPVGHCEKVAYRLHGTSA 146
Y+ D G E+ +Y G+ +
Sbjct: 124 YNIDMFGSVEEKSYVTTGSGS 144
>gi|426348535|ref|XP_004041889.1| PREDICTED: proteasome subunit beta type-3 [Gorilla gorilla gorilla]
Length = 205
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPHTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|388507486|gb|AFK41809.1| unknown [Medicago truncatula]
Length = 158
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG+ +AIAG D+ +IA+DTR S+ I++ + KI L + + SG AD +
Sbjct: 11 YDNNGGSCVAIAGSDYCVIAADTRMSTGYNILTRDYSKISHLAEKCVMAPSGFQADVKAL 70
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
L A + +S P A++LS LY +R FPYY + V +
Sbjct: 71 QKVLSARHLTYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYSSMCWVAL 119
>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 210
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+E + HG T + I D ++ +D R+S+ I +NN +KI ++ + ++G +AD+
Sbjct: 5 VEEKILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDLHAGLTLAGGVADA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+V L+ N K P+S+ A + SL+ ++ R +P+ +L+ G D G +
Sbjct: 65 QNIVDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQNRGYPFMADILVGGFDANGP-AL 123
Query: 126 YSYDPVGHCEKVAYRLHGTSA 146
++ D G E+ +Y G+ +
Sbjct: 124 FNIDMFGSVEEKSYVTTGSGS 144
>gi|348562309|ref|XP_003466953.1| PREDICTED: proteasome subunit beta type-3-like [Cavia porcellus]
Length = 202
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 4 NGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYERR PYY + ++ G+D T + + S D
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFQPFICSLDL 123
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 124 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 153
>gi|351706755|gb|EHB09674.1| Proteasome subunit beta type-3 [Heterocephalus glaber]
Length = 217
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 19 NGGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 78
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYERR PYY + ++ G+D T K + S D
Sbjct: 79 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 138
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 139 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 168
>gi|56755093|gb|AAW25726.1| SJCHGC01130 protein [Schistosoma japonicum]
Length = 184
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G V+ ++G D A IA D R N +S + K++ L + VG G D+ V
Sbjct: 6 HNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQTVFQ 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYD 129
RLQ N + + + MLS LLYERR PY+V+ ++ GID T K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 130 PVGH-CEKVAYRLHGTSAKFM 149
+G CE + + GT + M
Sbjct: 126 LIGCVCEANDFVVSGTCTEQM 146
>gi|21465651|pdb|1IRU|J Chain J, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465665|pdb|1IRU|X Chain X, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|565647|dbj|BAA05645.1| proteasome subunit HsC10-II [Homo sapiens]
gi|1091575|prf||2021261C proteasome:SUBUNIT=HsC10-II
Length = 205
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|301762874|ref|XP_002916854.1| PREDICTED: proteasome subunit beta type-3-like [Ailuropoda
melanoleuca]
Length = 202
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 4 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYERR PYY + ++ G+D T K + S D
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 123
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 124 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 153
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 90/169 (53%), Gaps = 4/169 (2%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT + I D ++A++ R S ++S + K++R+ ++ + +G MAD + ++
Sbjct: 6 GTTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVE 65
Query: 74 AEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
AE+ + A++LS +LYERR+FPYY ++++ G+D G +YS DP+G
Sbjct: 66 AEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLDEEGS-HLYSLDPIGA 124
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
+ Y G+ + ++S + S Y+ + + +++AL+ + +K
Sbjct: 125 IIEDDYVALGSGTQL---AISIVESNYKKDMSLDEALSLALKSVYAAMK 170
>gi|383873358|ref|NP_001244746.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|332258335|ref|XP_003278254.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Nomascus
leucogenys]
gi|402899980|ref|XP_003912961.1| PREDICTED: proteasome subunit beta type-3 [Papio anubis]
gi|403279415|ref|XP_003931246.1| PREDICTED: proteasome subunit beta type-3 [Saimiri boliviensis
boliviensis]
gi|355754088|gb|EHH58053.1| Proteasome subunit beta type-3 [Macaca fascicularis]
gi|380788351|gb|AFE66051.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|383414525|gb|AFH30476.1| proteasome subunit beta type-3 [Macaca mulatta]
gi|384948330|gb|AFI37770.1| proteasome subunit beta type-3 [Macaca mulatta]
Length = 205
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|281344355|gb|EFB19939.1| hypothetical protein PANDA_004975 [Ailuropoda melanoleuca]
Length = 190
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYERR PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 156
>gi|355568453|gb|EHH24734.1| Proteasome subunit beta type-3, partial [Macaca mulatta]
Length = 204
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 6 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 65
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 66 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 125
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 126 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 155
>gi|226478588|emb|CAX72789.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|226478710|emb|CAX72850.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
gi|257206170|emb|CAX82736.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G V+ ++G D A IA D R N +S + K++ L + VG G D+ V
Sbjct: 6 HNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQTVFQ 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYD 129
RLQ N + + + MLS LLYERR PY+V+ ++ GID T K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 130 PVGH-CEKVAYRLHGTSAKFM 149
+G CE + + GT + M
Sbjct: 126 LIGCVCEANDFVVSGTCTEQM 146
>gi|22538465|ref|NP_002786.2| proteasome subunit beta type-3 [Homo sapiens]
gi|397477037|ref|XP_003809892.1| PREDICTED: proteasome subunit beta type-3 [Pan paniscus]
gi|20532411|sp|P49720.2|PSB3_HUMAN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|15278174|gb|AAH13008.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|119580935|gb|EAW60531.1| proteasome (prosome, macropain) subunit, beta type, 3 [Homo
sapiens]
gi|261860656|dbj|BAI46850.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|410256642|gb|JAA16288.1| proteasome (prosome, macropain) subunit, beta type, 3 [Pan
troglodytes]
Length = 205
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|54696308|gb|AAV38526.1| proteasome (prosome, macropain) subunit, beta type, 3 [synthetic
construct]
gi|60812279|gb|AAX36205.1| proteasome subunit beta type 3 [synthetic construct]
Length = 206
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|212537585|ref|XP_002148948.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068690|gb|EEA22781.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 206
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF T +GI+G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + +S A ++S LYERR PY+V ++ GI+ TGK + +D
Sbjct: 68 FRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQAL 172
>gi|222136592|ref|NP_001138374.1| proteasome subunit beta type-3 [Sus scrofa]
Length = 205
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYERR PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYERRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT + M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCTEQMYGMCESLWEP 156
>gi|56755285|gb|AAW25822.1| unknown [Schistosoma japonicum]
Length = 190
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G V+ ++G D A IA D R N +S + K++ L + VG G D+ V
Sbjct: 6 HNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQTVFQ 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYD 129
RLQ N + + + MLS LLYERR PY+V+ ++ GID T K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 130 PVGH-CEKVAYRLHGTSAKFM 149
+G CE + + GT + M
Sbjct: 126 LIGCVCEANDFVVSGTCTEQM 146
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + +A DF ++A+D ++++ + N KI RL +A+ I+G +AD+ +
Sbjct: 30 RGTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIVRLTENSAITIAGLVADAQTLADY 89
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++AE +P+S+ A +L L+L E + FP+ VQ++L G D ++S D
Sbjct: 90 IRAEAYYYYYINNRPMSIRSMASLLGLILNEYKYFPFIVQLILGGYDYYEGAKLFSIDYF 149
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALE 175
G + Y G+ + + + S Y E D +++ ++
Sbjct: 150 GDVTEERYTATGSGSPIAIGVIE---SGYRPEMSIDDAVSLVVK 190
>gi|432957515|ref|XP_004085833.1| PREDICTED: proteasome subunit beta type-3-like [Oryzias latipes]
Length = 205
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + + +G++G D V R
Sbjct: 7 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D + + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKSFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMYGMCESLWEPDLEPEDLFETISQAM 171
>gi|291405921|ref|XP_002719377.1| PREDICTED: proteasome beta 3 subunit [Oryctolagus cuniculus]
Length = 205
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTYKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++A+D R+S ++S KIF++ + A+ +G++ D L +V
Sbjct: 5 KGTTTVGIVCKDGVVLAADMRASLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILSLVRL 64
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE G+ +S A + S +L RR FPY+ L+ G D K G+YS D
Sbjct: 65 LRAEAKLYRARVGREMSTKALATLTSNILSGRRYFPYFGWFLVAGYD--EKPGLYSIDMA 122
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + Y G+ +F + S L + Y+ + + + +A++ + +K
Sbjct: 123 GGITEDKYVSAGSGMEF---AYSVLDNEYDEKMNVKKGVKLAIKAINTAIK 170
>gi|398394287|ref|XP_003850602.1| proteasome core particle subunit beta 3 [Zymoseptoria tritici
IPO323]
gi|339470481|gb|EGP85578.1| hypothetical protein MYCGRDRAFT_105064 [Zymoseptoria tritici
IPO323]
Length = 206
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 4/173 (2%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + +GG +A+ G D IA D R VSNN KIF + +G++G D
Sbjct: 1 MSSPFAINGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGSSVYLGLTGLATD 60
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT-GKG 123
V + ++N + + +S + ++S LYERR P++V ++ GIDGT GK
Sbjct: 61 VSSVSELFRYKVNMYRLREERDISPKTFSNLVSSSLYERRFGPWFVSPVVAGIDGTSGKP 120
Query: 124 GVYSYDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+ +D +G C A + + GT++ + + L P D + I+ AL
Sbjct: 121 FICGFDSIG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQAL 172
>gi|323334738|gb|EGA76111.1| Pre7p [Saccharomyces cerevisiae AWRI796]
Length = 184
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Query: 46 KIFRLPNQTAVGISGNMADSLEVVSRLQAEINR-SAEAKGQPLSLPGTAEMLSLLLYERR 104
+ F + + +G AD +V R + + + + LS+ A + LLY +R
Sbjct: 4 RFFDCGDNIVMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKR 63
Query: 105 IFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
FPYYV ++ G+D GKG VYS+DPVG E+ R G +A ++
Sbjct: 64 FFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIM 109
>gi|118102948|ref|XP_418119.2| PREDICTED: proteasome subunit beta type-3 [Gallus gallus]
Length = 205
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IASD R +V+ + KIF + + +G++G D V R
Sbjct: 7 NGGAVMAMRGKNCVAIASDRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY + ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C + + + GT ++ M L P
Sbjct: 127 IG-CPMITEDFVVSGTCSEQMYGMCESLWEP 156
>gi|225706352|gb|ACO09022.1| Proteasome subunit beta type 3 [Osmerus mordax]
Length = 205
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G +A+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMRGKQCVAVAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYE+R PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYEKRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPDDLFETISQAM 171
>gi|47223967|emb|CAG06144.1| unnamed protein product [Tetraodon nigroviridis]
Length = 230
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + + +G++G D V R
Sbjct: 7 NGGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSP 159
+G C E + + GT ++ M L P
Sbjct: 127 IG-CPMETEDFVVSGTCSEQMYGMCESLWEP 156
>gi|431890707|gb|ELK01586.1| Proteasome subunit beta type-3 [Pteropus alecto]
Length = 234
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 36 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 95
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 96 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 155
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 156 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 185
>gi|29841419|gb|AAP06451.1| similar to NM_011971 proteasome (prosome, macropain) subunit, beta
type 3 in Mus musculus [Schistosoma japonicum]
Length = 209
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G V+ ++G D A IA D R N +S + K++ L + VG G D+ V
Sbjct: 6 HNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQTVFQ 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYD 129
RLQ N + + + MLS LLYERR PY+V+ ++ GID T K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 130 PVGH-CEKVAYRLHGTSAKFM 149
+G CE + + GT + M
Sbjct: 126 LIGCVCEANDFVVSGTCTEQM 146
>gi|358253687|dbj|GAA53599.1| 20S proteasome subunit beta 6, partial [Clonorchis sinensis]
Length = 156
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%)
Query: 52 NQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ 111
N + +G D L + L+ + G+ +S A +LS+ LY RR FP+YV
Sbjct: 2 NGKVLATTGFHGDVLTLTKLLENRVKTYRYDHGKEISTNAFAALLSVTLYTRRFFPFYVS 61
Query: 112 VLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYES 162
+L G+D G+G VY YDPVG E+V G+S + + + L +E+
Sbjct: 62 SILGGLDEEGRGAVYRYDPVGSFERVKCAAAGSSGVILQPFLDHRLLEWEN 112
>gi|353239440|emb|CCA71352.1| probable PUP3-20S proteasome subunit beta3 [Piriformospora indica
DSM 11827]
Length = 205
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+AG D IASD R + ++ N K+F + + +G++G D L + R
Sbjct: 7 NGGSVVAMAGKDCVAIASDLRLGNQALTIATNFEKVFPVTERIMLGMAGLATDVLTLRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI-DGTGKGGVYSYDP 130
+ +N + + + A ++S LYERR PY+++ ++ G+ GT K + S D
Sbjct: 67 FRFRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGLGKGTNKPFIASTDV 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT+ + L P D + I+ L
Sbjct: 127 IG-CINFAKDFVVAGTATDKLFGVAESLWEPDLEPEDLFETISQTL 171
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + + D + A++ R+S I KIF++ + I+G+++D+ +++
Sbjct: 8 KGTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGY 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ AE+ G P+S+ A M S +L+ R +PYYVQ LL G+D G ++S DP
Sbjct: 68 ISAEVALYRLRNGAPMSVEAAANMTSNILHASRFYPYYVQTLLGGVDEKGP-ALFSLDPS 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + + + ++A+DTR+S I + N KI ++ A+ +G++ D L +V L
Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+AE N G+ +S+ A +L+ +L + FPY L+ G D K ++S D VG
Sbjct: 70 KAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYD--EKPRLFSVDMVG 127
Query: 133 HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
+ Y G+ +F + S L S Y E D I +A++ + +K
Sbjct: 128 GITEDNYAAAGSGMEF---AYSILDSEYREEMSVNDGIKLAVKAINVAIK 174
>gi|346469345|gb|AEO34517.1| hypothetical protein [Amblyomma maculatum]
Length = 205
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R + G ++ + +IF + + G+ G D+ V R
Sbjct: 7 NGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDTQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L+ IN +G+ ++ ++S LLYERR PY+VQ ++ G+D
Sbjct: 67 LKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLD 113
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + + + ++A+DTR+S I + N KI ++ A+ +G++ D L +V
Sbjct: 6 KGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRL 65
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE N G+ +S+ A +L+ +L + FPY L+ G D K ++S D V
Sbjct: 66 LKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYD--EKPRLFSVDMV 123
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + Y G+ +F + S L S Y E D I +A++ + +K
Sbjct: 124 GGITEDNYAAAGSGMEF---AYSILDSEYREEMSVNDGIKLAVKAINVAIK 171
>gi|338710899|ref|XP_001501618.2| PREDICTED: proteasome subunit beta type-3-like [Equus caballus]
Length = 205
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPQTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT + M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCTEQMYGMCESLWEP 156
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + I G D +IA++ R + ++S K+F++ N +G +AD ++ +
Sbjct: 9 GATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIKEV 68
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
A +N +G S+ A++LS L+ R FPY+++ ++ GID G V DP+G
Sbjct: 69 TAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGP-HVIVLDPLG 127
Query: 133 HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALE 175
+ Y + GT A+ + + L S + D+ T A++
Sbjct: 128 SMIEDDYAVVGTGAEVAVGVIENLYRKDMSATEIRDLATKAIK 170
>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 71/133 (53%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT + + D ++A+D R + ++S N K+F + N+ A+ +SG AD ++ L
Sbjct: 9 GTAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKVFLINNRAAIAMSGLYADVGAILRYLT 68
Query: 74 AEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
AE + + +SL +++LS +LY ++ P+ ++ L+ GID G+ +Y+ D +G
Sbjct: 69 AESKYYELTEERTMSLYAISKLLSGILYSYKMLPFIIEALVGGIDRDGQPKIYTLDSLGS 128
Query: 134 CEKVAYRLHGTSA 146
+ Y G+ A
Sbjct: 129 VSEDKYMAVGSGA 141
>gi|226478644|emb|CAX72817.1| proteasome (prosome, macropain) subunit, beta type 3 [Schistosoma
japonicum]
Length = 205
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G V+ ++G D A IA D R N +S + K++ L + VG G D+ V
Sbjct: 6 HNGSAVIGMSGKDCAAIACDLRFGVNLQTISTDFTKVYSLGPRLYVGFPGLATDNQIVFQ 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYD 129
RLQ N + + + MLS LLYERR PY+V+ ++ GID T K V D
Sbjct: 66 RLQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMD 125
Query: 130 PVGH-CEKVAYRLHGTSAKFM 149
+G CE + + GT + M
Sbjct: 126 LIGCVCEANDFVVSGTCTEQM 146
>gi|242808757|ref|XP_002485230.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
gi|218715855|gb|EED15277.1| proteasome component Pup3, putative [Talaromyces stipitatus ATCC
10500]
Length = 206
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF T +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVTTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + +S A ++S LYERR PY+V ++ GI+ TGK + +D
Sbjct: 68 FRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQAL 172
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+E + HG T + I D ++ +D R+S+ I +NN +KI ++ + ++G +AD+
Sbjct: 5 VEEKILHGTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQQIDQHAGLTLAGGVADA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+V L+ N K +S+ A + SL+ ++ R +P+ +LL G D G +
Sbjct: 65 QNIVDILRYHSNLHRVEKQNSISIHSLARLCSLIFHQNRGYPFMADILLGGYDANGP-SL 123
Query: 126 YSYDPVGHCEKVAYRLHGTSA 146
++ D G E+ +Y G+ +
Sbjct: 124 FNVDMFGSVEEKSYVTTGSGS 144
>gi|355714019|gb|AES04862.1| proteasome subunit beta type 3 [Mustela putorius furo]
Length = 180
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 156
>gi|149054060|gb|EDM05877.1| rCG33987, isoform CRA_d [Rattus norvegicus]
Length = 202
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 4 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 123
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 124 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 153
>gi|402466187|gb|EJW01728.1| hypothetical protein EDEG_03753 [Edhazardia aedis USNM 41457]
Length = 225
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y + GT +AI D+ ++A+DTR SS I + N KI+ L + + ++G AD EV
Sbjct: 17 YEFNAGTSLAINMNDYLILATDTRHSSEMGINTRNISKIYFLDDLYLI-VTGFYADGYEV 75
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYS 127
L ++ + + + A +L LLY +R FPYY +L G D + K ++S
Sbjct: 76 YINLLYQLIEYESKNNKKMGIRSAAHLLHNLLYRKRFFPYYSYCILGGFDKKSQKFLLFS 135
Query: 128 YDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVKVP 184
+D VG + R+ G+ + + +S E + T V +E+ +VK+
Sbjct: 136 FDVVGSYGETVCRVDGSGTTMIQPLLDSRISKLNWENNDTKVTD--CKEVCELVKIA 190
>gi|8394082|ref|NP_058981.1| proteasome subunit beta type-3 [Rattus norvegicus]
gi|730380|sp|P40112.1|PSB3_RAT RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|458731|dbj|BAA04824.1| proteasome subunit RC10-II [Rattus sp.]
gi|54261675|gb|AAH84723.1| Proteasome (prosome, macropain) subunit, beta type 3 [Rattus
norvegicus]
gi|149054057|gb|EDM05874.1| rCG33987, isoform CRA_a [Rattus norvegicus]
Length = 205
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 156
>gi|6755202|ref|NP_036101.1| proteasome subunit beta type-3 [Mus musculus]
gi|9910831|sp|Q9R1P1.1|PSB3_MOUSE RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|378792311|pdb|3UNB|I Chain I, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792325|pdb|3UNB|W Chain W, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792339|pdb|3UNB|KK Chain k, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792353|pdb|3UNB|YY Chain y, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792367|pdb|3UNE|I Chain I, Mouse Constitutive 20s Proteasome
gi|378792381|pdb|3UNE|W Chain W, Mouse Constitutive 20s Proteasome
gi|378792395|pdb|3UNE|KK Chain k, Mouse Constitutive 20s Proteasome
gi|378792409|pdb|3UNE|YY Chain y, Mouse Constitutive 20s Proteasome
gi|378792423|pdb|3UNF|I Chain I, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792437|pdb|3UNF|W Chain W, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792451|pdb|3UNH|I Chain I, Mouse 20s Immunoproteasome
gi|378792465|pdb|3UNH|W Chain W, Mouse 20s Immunoproteasome
gi|5757661|gb|AAD50537.1|AF060092_1 proteasome subunit C10-II [Mus musculus]
gi|12832232|dbj|BAB22017.1| unnamed protein product [Mus musculus]
gi|12845973|dbj|BAB26979.1| unnamed protein product [Mus musculus]
gi|15928628|gb|AAH14783.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|68085773|gb|AAH98233.1| Proteasome (prosome, macropain) subunit, beta type 3 [Mus musculus]
gi|74139857|dbj|BAE31772.1| unnamed protein product [Mus musculus]
gi|148684145|gb|EDL16092.1| mCG13231, isoform CRA_b [Mus musculus]
gi|444713978|gb|ELW54866.1| Proteasome subunit beta type-3 [Tupaia chinensis]
Length = 205
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 156
>gi|323508047|emb|CBQ67918.1| probable PUP3-20S proteasome subunit beta3 [Sporisorium reilianum
SRZ2]
Length = 204
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A G + +IASD R V+ N K+FR+ +T VG+ G +D + R
Sbjct: 7 NGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYVGLPGLASDVATLKER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ +N + + + A ++S LYERR PY+++ ++ GI+ + + + D V
Sbjct: 67 FRYRVNMYKMKEERDIEPEIFAHLVSSTLYERRFGPYFIEPVIAGINSKNEPFIAASDVV 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
G C A + + GT+A + L P
Sbjct: 127 G-CLNFAKDFVVSGTAADKLFGMAEGLWEP 155
>gi|196476700|gb|ACG76215.1| proteasome beta 3 subunit [Amblyomma americanum]
Length = 182
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R + G ++ + +IF + + G+ G D+ V R
Sbjct: 7 NGGVVLAMKGKDCVAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLPGLATDTQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L+ IN +G+ ++ ++S LLYERR PY+VQ ++ G+D
Sbjct: 67 LKFRINLYELREGRKITPKTLGSVISNLLYERRFGPYFVQPVVAGLD 113
>gi|410980899|ref|XP_003996811.1| PREDICTED: proteasome subunit beta type-3 [Felis catus]
Length = 205
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 156
>gi|356461018|ref|NP_001239086.1| proteasome subunit beta type-3 [Canis lupus familiaris]
gi|354474809|ref|XP_003499622.1| PREDICTED: proteasome subunit beta type-3-like [Cricetulus griseus]
Length = 205
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 156
>gi|225705338|gb|ACO08515.1| Proteasome subunit beta type 3 [Oncorhynchus mykiss]
Length = 205
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D T + + S
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFIRSLGL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GT ++ M L P D + I+ A+
Sbjct: 127 IG-CPMVTEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 171
>gi|159110825|ref|XP_001705654.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
gi|157433742|gb|EDO77980.1| Proteasome subunit beta type 3 [Giardia lamblia ATCC 50803]
Length = 207
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G ++ I G D +A+D R S T+ N+ +IFRL +G++G D L
Sbjct: 8 NGSALIGIKGKDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYR 67
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
+++ + N + + + TA+M+S LY+ R PY++ ++ G + GK + + D
Sbjct: 68 QIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDT 127
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESE 163
+G + +++ GT++ F+L + P SE
Sbjct: 128 IGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSE 161
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + + D ++A+D R+S I N KI+++ + A+ I+G++ D+ +V
Sbjct: 4 KGTTTIGLICKDAVILAADKRASLGNLIADKNAKKIYKIDDNLALTIAGSVGDAQSLVRY 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L AE G+ +S +LS +L+ R FP+ VQ+++ G D G +YS DP+
Sbjct: 64 LTAEAKLYRMRTGKLMSPLACTTLLSNILHSSRYFPFLVQMIVGGFDEKG-FKLYSLDPL 122
Query: 132 GHC-EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G E+ + G+ + + L + Y+ + DY +++ L+ L
Sbjct: 123 GGVNEEKDFTATGSGSPI---AYGVLEAGYKKDMDYKKGVSLVLKAL 166
>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 207
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT + I D ++A+D R S I+S N K++ L ++ + ++G AD +V +
Sbjct: 8 GTALGIKAKDGVVLATDKRMSYGSFIMSRNAKKVYLLNDRVGIALTGLYADVSGLVRIMN 67
Query: 74 AEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
AEI+ +SL +++ S +LY ++ P+ ++ ++ G+D GK +Y+ D +G
Sbjct: 68 AEISYYETTNETTMSLYAISKLFSNILYSYKMLPFLIESIIGGLDRDGKPKIYTLDALGS 127
Query: 134 CEKVAYRLHGTSAKFMLASMSY 155
+ Y G+ L + Y
Sbjct: 128 VTEDKYMAVGSGGTTALGVLEY 149
>gi|327275596|ref|XP_003222559.1| PREDICTED: proteasome subunit beta type-3-like [Anolis
carolinensis]
Length = 205
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLFIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY + ++ G+D T + V S D
Sbjct: 67 LKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLDPITYEPFVCSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C + + GT ++ M L P
Sbjct: 127 IG-CPMTTDDFVVSGTCSEQMYGMCESLWEP 156
>gi|297701417|ref|XP_002827712.1| PREDICTED: proteasome subunit beta type-3 isoform 1 [Pongo abelii]
Length = 218
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + +++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSLVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT A+ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCAEQMYGMCESLWEP 156
>gi|326426453|gb|EGD72023.1| proteasome subunit beta type-3 [Salpingoeca sp. ATCC 50818]
Length = 204
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G V+A+ G + IA+D R + VS + K+F++ + VG+ G D++ V R
Sbjct: 7 NGSAVVAMTGKECVAIAADRRLGAQAQTVSTDFQKVFQMGPKLFVGLPGLGTDAITVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ +N + + + ++S LYERR PY+V+ ++ G+D + V S D +
Sbjct: 67 LKFRLNMYTLREERDIEPKTMINLVSSFLYERRFGPYFVEPVVAGLDSKNQPYVASTDLI 126
Query: 132 GHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C E + + GTS++ + L P + D + I+ AL
Sbjct: 127 G-CPMETSDFVVGGTSSEQLYGMCESLYKPDMAPDDLFETISQAL 170
>gi|89272044|emb|CAJ83196.1| proteasome (prosome macropain) subunit beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 194
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 17 MAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEI 76
MA+ G D IA+D R +V+ + KIF + ++ +G++G D V RL+ +
Sbjct: 1 MAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRL 60
Query: 77 NRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPVGHC- 134
N +G+ + M++ LLYERR PYY++ ++ G+D T K + S D +G C
Sbjct: 61 NLYELKEGRQIKPKTFMSMVANLLYERRFGPYYIEPVIAGLDPKTFKPFICSLDLIG-CP 119
Query: 135 -EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
E + + GT ++ M L P D + I+ A+
Sbjct: 120 METEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM 160
>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 208
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
++ + HG T + I D ++ +D R+S+ I +NN +KI ++ + + ++G +AD+
Sbjct: 3 IDEKILHGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADA 62
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+ L+ N A K + + + A + SL+ ++ R +P+ +LL G D G +
Sbjct: 63 QNLTDILRYHANVHAVQKNENIPIKSLARLCSLVFHQNRGYPFIADILLGGYDRDGP-AL 121
Query: 126 YSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVV 181
++ D G EK +Y G+ + + L Y + D +AL + +
Sbjct: 122 FNIDMFGSVEKKSYVTTGSGSP---VAYGVLEDEYRDDLTLEDAKLIALRAVKAAI 174
>gi|77736139|ref|NP_001029768.1| proteasome subunit beta type-3 [Bos taurus]
gi|426237857|ref|XP_004012874.1| PREDICTED: proteasome subunit beta type-3 [Ovis aries]
gi|108935878|sp|P33672.3|PSB3_BOVIN RecName: Full=Proteasome subunit beta type-3; AltName:
Full=Proteasome chain 13; AltName: Full=Proteasome
component C10-II; AltName: Full=Proteasome theta chain
gi|74354224|gb|AAI02555.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|154426162|gb|AAI51436.1| Proteasome (prosome, macropain) subunit, beta type, 3 [Bos taurus]
gi|296476492|tpg|DAA18607.1| TPA: proteasome subunit beta type-3 [Bos taurus]
Length = 205
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT + M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCTEQMYGMCESLWEP 156
>gi|440904222|gb|ELR54761.1| Proteasome subunit beta type-3, partial [Bos grunniens mutus]
Length = 205
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT + M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCTEQMYGMCESLWEP 156
>gi|268530996|ref|XP_002630624.1| C. briggsae CBR-PBS-3 protein [Caenorhabditis briggsae]
Length = 204
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 65/120 (54%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGTV+A+AG + IASD R T ++ +Q K+ ++ ++ VG++G +D+ V+ ++
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
N + + + +EM+S L Y+ R Y+ + L+ G+D T K + D +G
Sbjct: 68 MFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIG 127
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++A++ R++ I S K++++ ++ + +G + D+ ++
Sbjct: 10 KGTTTIGIVFADGVILATEKRATMGLMIASKKAKKVYQVADRIGMTTAGGVGDAQQLARI 69
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L E N + +P+++ TA +LS L + R FPYYVQ+L+ G+D G VYS D +
Sbjct: 70 LNVECNLYQIRRSRPITVGATATLLSNYLNQNRYFPYYVQLLVGGVDEKGP-SVYSVDAM 128
Query: 132 GHCEK 136
G K
Sbjct: 129 GGATK 133
>gi|17380218|sp|Q9N9W8.1|PSB3_GIALA RecName: Full=Proteasome subunit beta type-3
gi|9367751|emb|CAB97490.1| 20S proteasome subunit [Giardia intestinalis]
Length = 207
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G ++ I G D +A+D R S T+ N+ +IFRL +G++G D L
Sbjct: 8 NGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYR 67
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
+++ + N + + + TA+M+S LY+ R PY++ ++ G + GK + + D
Sbjct: 68 QIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDT 127
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESE 163
+G + +++ GT++ F+L + P SE
Sbjct: 128 IGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSE 161
>gi|17535357|ref|NP_494913.1| Protein PBS-3 [Caenorhabditis elegans]
gi|17380195|sp|Q23237.1|PSB3_CAEEL RecName: Full=Proteasome subunit beta type-3; Short=Proteasome
subunit beta 3
gi|351050990|emb|CCD73694.1| Protein PBS-3 [Caenorhabditis elegans]
Length = 204
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 65/120 (54%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGTV+A+AG + IASD R T ++ +Q K+ ++ ++ VG++G +D+ V+ ++
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
N + + + +EM+S L Y+ R Y+ + L+ G+D T K + D +G
Sbjct: 68 MFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIG 127
>gi|299116535|emb|CBN74723.1| proteasome beta subunit [Ectocarpus siliculosus]
Length = 220
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+ +A+AG +A D R G +VS ++ ++ Q G +G D L V+
Sbjct: 22 NGGSCLAMAGKGCVALAVDRRFGLEGQLVSTEAKRVLKVNGQLLCGFTGLWTDVLTVMQD 81
Query: 72 LQAEIN-RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
L +E+ +S +P++ A +LS LLY RR P++V+ ++ G+D G+ + D
Sbjct: 82 LSSEVALKSLAEADRPIAPAALAGLLSTLLYSRRGSPWFVEPIVAGLDPRGRPYLCGQDI 141
Query: 131 VGHCEKV-AYRLHGTSAKFMLASMSYLLSP 159
+G +V + + GTSA+ + + P
Sbjct: 142 LGAPVEVDDFVVAGTSAQSLYGTCEAFFRP 171
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M+ V G T + + D ++A++ R++ I S KI+++ ++ A+ +G++ D
Sbjct: 1 MIHDKVFKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGD 60
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ + ++ E N K + ++ A ++S LL R FPY VQ+L+ G+D TG
Sbjct: 61 AQFLARLIKVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDKTG-AK 119
Query: 125 VYSYDPVG 132
+YS DP+G
Sbjct: 120 IYSIDPIG 127
>gi|326934090|ref|XP_003213128.1| PREDICTED: proteasome subunit beta type-3-like [Meleagris
gallopavo]
Length = 205
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +++ + KIF + + +G++G D V R
Sbjct: 7 NGGAVMAMRGKNCVAIAADRRFGIQAQMITTDFQKIFPMGERLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY + ++ G+D T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYTEPVIAGLDPITHEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C + + + GT ++ M L P
Sbjct: 127 IG-CPMITEDFVVSGTCSEQMYGMCESLWEP 156
>gi|212537589|ref|XP_002148950.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068692|gb|EEA22783.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 171
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF T +GI+G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + +S A ++S LYERR PY+V ++ GI+ TGK + +D
Sbjct: 68 FRYKVNMYRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT++ + + L P
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEP 157
>gi|295672716|ref|XP_002796904.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282276|gb|EEH37842.1| proteasome component PUP3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF T +G++G D V
Sbjct: 8 NGGACVAMIGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDV 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
L+ ++N + + +S A ++S LYE+R PY+V +L GI+ TG+ + +D
Sbjct: 68 LRFKVNMYRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT+++ + + L P D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASEQLFGTCEGLWEPDLGPEDLFETISQAL 172
>gi|341885035|gb|EGT40970.1| hypothetical protein CAEBREN_25310 [Caenorhabditis brenneri]
Length = 223
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGT++A+AG + IASD R T ++ +Q K+ ++ ++ VG++G +D+ V+ ++
Sbjct: 8 GGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
N + + + +EM+S L Y+ R Y+ + L+ G+D T K + D +G
Sbjct: 68 MFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIG 127
>gi|114052162|ref|NP_001040460.1| proteasome beta 3 subunit [Bombyx mori]
gi|95102980|gb|ABF51431.1| proteasome beta 3 subunit [Bombyx mori]
Length = 205
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R VS N K+F++ VG+ G D+ V R
Sbjct: 7 NGGAVVAMKGQDCVAIATDKRFGIQAQTVSTNFPKVFQMGPTLYVGLPGLATDTQTVFQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGT-AEMLSLLLYERRIFPYYVQVLLVGID 118
L+ +N E K + P T + MLS LLYERR PY+++ ++ G+D
Sbjct: 67 LKFRMNLY-ELKENRMMRPKTFSAMLSNLLYERRFGPYFIEPVIAGLD 113
>gi|341897730|gb|EGT53665.1| hypothetical protein CAEBREN_01834 [Caenorhabditis brenneri]
Length = 204
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGT++A+AG + IASD R T ++ +Q K+ ++ ++ VG++G +D+ V+ ++
Sbjct: 8 GGTIVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
N + + + +EM+S L Y+ R Y+ + L+ G+D T K + D +G
Sbjct: 68 MFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDTIG 127
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
Query: 11 QH--GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
QH G T + IA D ++A++ R++ I S KI+++ ++ + +G++ D+ ++
Sbjct: 6 QHLKGTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQIDDRIGMTTAGSVGDAQQI 65
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
V + E + +P+++ G +LS LL +R FP VQ+++ G+D TG +YS
Sbjct: 66 VRIISVESKLFKMRRNEPITIKGITTLLSNLLSGQRYFPLMVQLIVGGVDKTGP-NMYSL 124
Query: 129 DPVG 132
DP+G
Sbjct: 125 DPLG 128
>gi|326329709|ref|ZP_08196030.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
gi|325952474|gb|EGD44493.1| proteasome, beta subunit [Nocardioidaceae bacterium Broad-1]
Length = 278
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P +IA D R++ I + K+F +AVGI+G+ ++E+V
Sbjct: 46 HGTTIVAATFPGGVIIAGDRRATQGNLIAERDMRKVFPADEYSAVGIAGSAGLAVELVKL 105
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFP---YYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LS+ G A LS L+ V L VG D G G +Y
Sbjct: 106 FQTELEHYEKIEGTTLSIEGKASRLSALVRGNLAMAMQGLVVVPLFVGFDPDAGVGKIYG 165
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YDP G E+ Y G+ + F ++ L Y ++ D ++ + ++ L
Sbjct: 166 YDPTGGRYEQTGYAGVGSGSLFAKGALKKL---YRTDLDEDTLVAVLVQAL 213
>gi|281209309|gb|EFA83482.1| p21-activated protein kinase [Polysphondylium pallidum PN500]
Length = 1404
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 63/121 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+ + G D IA+D R T VS N K++R+ ++ +GISG + D+ + +
Sbjct: 7 NGGAVIVMTGKDCVAIATDLRFGIQHTTVSTNNPKVYRISDKCFIGISGLVTDAQTLYQK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L N + + +S ++S +LYE+R PY+ + ++ G+D K + D +
Sbjct: 67 LVFRHNLYKLKEERDMSPQVLTNLVSNMLYEKRFGPYFTEPVICGLDSNNKPFISGMDLI 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|219123814|ref|XP_002182212.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406173|gb|EEC46113.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 231
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTR------------------SSSNGTIVSNNQL 45
A E Y +GG V A+AG DF ++++DTR ++++G ++ +
Sbjct: 7 ADFEPYQLNGGLVAAVAGRDFVVLSTDTRLMGPSGYDILERNHVKIETTNSGELIVHAST 66
Query: 46 KIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQP-LSLPGTAEMLSLLLYERR 104
K+ P T VG SG AD E++ R R+A G+ + A +L +LY RR
Sbjct: 67 KLVYAP--TFVGSSGCNAD-CEMLKRTVRADTRAAFYHGESDIQTAAVATLLGQMLYSRR 123
Query: 105 IFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
FP+Y ++ G++ G G VY YD +G E+V GT + +
Sbjct: 124 GFPFYSFCVVGGME-NGAGKVYVYDAIGSYEQVGVATSGTGRELL 167
>gi|256832436|ref|YP_003161163.1| 20S proteasome A and B subunits [Jonesia denitrificans DSM 20603]
gi|302595738|sp|C7R403.1|PSB_JONDD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256685967|gb|ACV08860.1| 20S proteasome A and B subunits [Jonesia denitrificans DSM 20603]
Length = 302
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ + +IA D R++ TI K+F +A+ I+G ++E+V
Sbjct: 49 HGTTIVALEYHNGIIIAGDRRATMGTTIAHREIEKVFAADEHSAIAIAGTAGLAIELVRL 108
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVL-----LVGIDGT-GKGGV 125
Q E+ + +G PLSL G A LS +L R +Q L G D T +G +
Sbjct: 109 FQLELEHYEKIEGTPLSLDGKANRLSTML--RSHLHLALQGLPIVPIFAGWDSTRHQGRL 166
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++YD G E+ + G+ + F +++ L P + D T IT+ALE L
Sbjct: 167 FAYDVTGGRYEEPNFTCAGSGSVFARSALKKLWKP---QLDATRAITIALEAL 216
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 1/128 (0%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M+E G T + I ++A++ R++ I S + KI+R+ + A+ I+G++ D
Sbjct: 1 MMEDKQYKGTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMTIAGSVGD 60
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ LQ E + +S+ + +LS +L E R PYYVQVL+ G+D G
Sbjct: 61 GQRLARILQVEAKLFELRRHGSMSINALSMLLSNILAEMRYAPYYVQVLIGGLDKAGP-K 119
Query: 125 VYSYDPVG 132
+YS DP+G
Sbjct: 120 IYSLDPLG 127
>gi|313228966|emb|CBY18118.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+++ ++G + IASD R +S + KIF++ ++ +G+SG D V+++
Sbjct: 6 NGGSIVGMSGDNCVCIASDNRYGQQLHTISTDFPKIFKITDKIFIGLSGLATDIQTVLNK 65
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++ ++N + + +S M+S LLYERR P++ + ++V ++ G + D +
Sbjct: 66 IKYKVNMYELRENRKMSPKCFKTMVSNLLYERRFGPFFAEPVIVALNDDGTTMLCGMDCL 125
Query: 132 GHCEKVA-YRLHGTSAKFM 149
G E Y + GT+A M
Sbjct: 126 GAAESPKDYVVAGTAANEM 144
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR- 71
G T + I G + ++A++ R S G I+S K++++ + + ++G AD L+ +S+
Sbjct: 8 GATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFAD-LQAISKI 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AEI G+ +S+ A +L+ +LY + +P+ + L+ G++ G +Y DP+
Sbjct: 67 LRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEADGTAKLYVMDPL 126
Query: 132 GHCEKVAYRLHGTSA 146
G + Y G+ A
Sbjct: 127 GSLIEDDYAAIGSGA 141
>gi|414589907|tpg|DAA40478.1| TPA: hypothetical protein ZEAMMB73_835212 [Zea mays]
Length = 188
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%)
Query: 48 FRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFP 107
F+L ++ + SG D + L A + +S P A++LS LY +R FP
Sbjct: 15 FKLADKCVLASSGFQGDIKALQKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFP 74
Query: 108 YYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
YY +L G+D GKG V++YD VG E+ Y GT + ++
Sbjct: 75 YYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSTLIM 117
>gi|156095029|ref|XP_001613550.1| 20S proteasome subunit beta-3 [Plasmodium vivax Sal-1]
gi|148802424|gb|EDL43823.1| 20S proteasome subunit beta-3, putative [Plasmodium vivax]
Length = 218
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 14/150 (9%)
Query: 12 HGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+GG V+ ++G IA D R ++N T VS N KIF++ + VG+SG D +
Sbjct: 8 NGGCVLGMSGAQCVAIACDLRLGANNFTTVSTNFTKIFKMNDYVYVGLSGLATDIQTLYE 67
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG------IDGTGKG- 123
L+ +N + P+ + A MLS +LY R PY+V ++VG +D GK
Sbjct: 68 LLRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKV 127
Query: 124 -----GVYSYDPVG-HCEKVAYRLHGTSAK 147
+ +YD +G CE + ++G +++
Sbjct: 128 CSFEPYLTAYDLIGAKCETKDFVVNGVTSE 157
>gi|83769195|dbj|BAE59332.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 203
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+GG +A+ G D IA D R VSNN KIF T +G++G D V
Sbjct: 4 HNGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVSTVSD 63
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYD 129
+ ++N + + ++ A ++S LYERR P++V ++ GI+ TGK + +D
Sbjct: 64 LFRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFICGFD 123
Query: 130 PVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P + D + I+ AL
Sbjct: 124 SIG-CIDFAKDFIVSGTASDQLFGTCESLWEPDLAPEDLFETISQAL 169
>gi|190348459|gb|EDK40915.2| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + + +GG +A+ G D IA DTR S ++NN K+F++ T +G++G D
Sbjct: 1 MSDPFSINGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATD 60
Query: 65 --SLEVVSRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
+L RL+ + + E + +P +L A ++S LYERR PY+V ++ G+ G
Sbjct: 61 VITLREDFRLKNNLYKLREEREMEPKTL---ANLVSTSLYERRFGPYFVSPIVAGLGKGG 117
Query: 122 KGGVYSYDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+ + +D +G C A + + GT++ + + L P D + I+ AL
Sbjct: 118 QPFICGFDSIG-CIDFAKDFIVSGTASDQLYGTCESLYEPNLEPEDLFETISQAL 171
>gi|68060726|ref|XP_672353.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56489346|emb|CAI05284.1| hypothetical protein PB300285.00.0 [Plasmodium berghei]
Length = 237
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 25/161 (15%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
T + + G ++ ++A DTR S + +I + N KI ++ ++ +G SG +D + S LQ
Sbjct: 11 TGIGLTGNNYVILAGDTRLSLSYSIYTRNCPKISKITDKCIIGSSGMQSDIKTLHSLLQV 70
Query: 75 EI-----------------NRSAEAKGQPLSLPGT--------AEMLSLLLYERRIFPYY 109
+ ++ + K Q L + A++L + LY RR FPYY
Sbjct: 71 LLKIFLLYNYYCCNLIIFFSKILQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRFFPYY 130
Query: 110 VQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
+L GID GKG +YSYD +G + + G+ + +L
Sbjct: 131 TFNILAGIDENGKGVLYSYDAIGSYYQSTHACTGSGSSLIL 171
>gi|392883970|gb|AFM90817.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ H +G +MA+ G + IASD R +V+ + KI+ + + +G++G D
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGG 124
V RL+ +N +G+ + M+S LLYERR PYYV ++ G+ T +
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 125 VYSYDPVGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+ S D +G C E + + GT ++ M L P D + I+ A+
Sbjct: 121 ICSLDVIG-CPMETDDFVVSGTCSEQMYGMCESLWEPDLESEDLFETISQAM 171
>gi|238491746|ref|XP_002377110.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|317146166|ref|XP_001821334.2| proteasome component PUP3 [Aspergillus oryzae RIB40]
gi|220697523|gb|EED53864.1| proteasome component Pup3, putative [Aspergillus flavus NRRL3357]
gi|391869220|gb|EIT78422.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Aspergillus oryzae 3.042]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF T +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYSPSTFLGLTGLATDVSTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR P++V ++ GI+ TGK + +D
Sbjct: 68 FRYKVNMYRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVVAGINSTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P + D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCESLWEPDLAPEDLFETISQAL 172
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6.1|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
A L V G T + + G DF ++A+D R+++ I + KI + + A I+G +
Sbjct: 3 ADLRDKVLKGTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVG 62
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D+ ++V RL+ E G + + A + SL+L++ R VQ+L+ G+D G
Sbjct: 63 DAQQLVDRLRVEARYYKTITGDSMPVKSVATLASLILFQYRPI-LSVQMLIGGVDSDGP- 120
Query: 124 GVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALE 175
++S D +G + Y G+ + + ++S L Y + + + +A++
Sbjct: 121 SLFSVDWLGTVTREKYTATGSGSPY---AVSLLEHEYREDLSLEEAVNLAVK 169
>gi|425781832|gb|EKV19776.1| hypothetical protein PDIG_01170 [Penicillium digitatum PHI26]
gi|425782962|gb|EKV20840.1| hypothetical protein PDIP_12490 [Penicillium digitatum Pd1]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R +SNN KIF T +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTISNNFPKIFNYAPSTYLGLTGLATDVNTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYE+R PY+V +L GI+ TGK + +D
Sbjct: 68 FRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVLAGINPTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P + D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLAPEDLFETISQAL 172
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
++ + HG T + I D ++ +D R+S+ I +NN +KI ++ + + ++G +AD+
Sbjct: 5 IDEKILHGTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+ L+ N A K + + + A + SL+ ++ R +P+ +LL G D G +
Sbjct: 65 QNLTDILRYHANIHAVQKNENIPIRSLARLCSLVFHQNRGYPFIADILLGGYDQDGP-QL 123
Query: 126 YSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVV 181
++ D G EK +Y G+ + + L Y + D +AL + +
Sbjct: 124 FNIDMFGSVEKKSYVTTGSGSP---VAYGVLEDEYRDDLTLEDAKGIALRAVKAAI 176
>gi|428162279|gb|EKX31444.1| proteasome subunit beta type 3 [Guillardia theta CCMP2712]
Length = 208
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 66/121 (54%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+ +AG + IA D R + ++ ++ K++++ +Q +G++G D R
Sbjct: 7 NGGCVIGMAGKNCVAIACDKRYGAQYQTLATDKTKVYKMHDQLFIGLAGLATDQQTFYER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ + + + + + +M+S LLYE+R PY+++ ++ G+D K ++S D +
Sbjct: 67 LKFRLAMYSLREERLIKPASFGKMVSTLLYEKRFGPYFIEPVIAGLDKENKPYLFSSDFI 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|71003984|ref|XP_756658.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
gi|46095730|gb|EAK80963.1| hypothetical protein UM00511.1 [Ustilago maydis 521]
Length = 189
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A G + +IASD R V+ N K+FR+ +T VG+ G +D + R
Sbjct: 7 NGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYVGLPGLASDVATLKER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ +N + + + A ++S LYERR PY+++ ++ GI+ + + + D V
Sbjct: 67 FRYRVNMYKMKEERDIEPEIFANLVSSTLYERRFGPYFIEPVIAGINSKDEPFIAASDVV 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
G C A + + GT++ + L P
Sbjct: 127 G-CLNFAKDFVVSGTASDKLFGMAEGLWEP 155
>gi|121706806|ref|XP_001271634.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
gi|119399782|gb|EAW10208.1| proteasome component Pup3, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS- 70
+GG +A+ G D IA D R VSNN KIF T +G++G +A + VS
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTG-LATDVNTVSD 66
Query: 71 --RLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVY 126
R + + R E + P +L A ++S LYERR P++V ++ G++ TGK +
Sbjct: 67 LFRFKVNMYRLREERNIAPQTL---ANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFIC 123
Query: 127 SYDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+D +G C A + + GT++ + + L P S D + I+ AL
Sbjct: 124 GFDSIG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLSPEDLFETISQAL 172
>gi|374628281|ref|ZP_09700666.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
gi|373906394|gb|EHQ34498.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
limicola DSM 2279]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ + G T + + ++A++ R++ I S K++++ ++ + I+G + D+
Sbjct: 4 VSQEIMKGTTTVGLLFDGGVVLATERRATMGNMIASKKAKKVYQIADRIGMTIAGGVGDA 63
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
++ +Q E + +G+P+++ A +LS +L + R+FPYYVQ+L+ GID G +
Sbjct: 64 QQLARLMQVECSLFNIRRGRPIAVGAAATLLSNVLNQNRMFPYYVQLLVGGIDRYGP-SI 122
Query: 126 YSYDPVG 132
YS D +G
Sbjct: 123 YSVDALG 129
>gi|308493735|ref|XP_003109057.1| CRE-PBS-3 protein [Caenorhabditis remanei]
gi|308247614|gb|EFO91566.1| CRE-PBS-3 protein [Caenorhabditis remanei]
Length = 204
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 65/120 (54%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGTV+A+AG + IASD R T ++ +Q K+ ++ ++ VG++G +D+ V+ ++
Sbjct: 8 GGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKI 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
N + + + +EM+S L Y+ R Y+ + L+ G+D + K + D +G
Sbjct: 68 MFRKNLYELRENRRIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDSNKPYICCMDTIG 127
>gi|254385050|ref|ZP_05000384.1| 20S proteasome beta-subunit [Streptomyces sp. Mg1]
gi|194343929|gb|EDX24895.1| 20S proteasome beta-subunit [Streptomyces sp. Mg1]
Length = 279
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 50 HGTTIVATTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 109
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D G KG ++S
Sbjct: 110 FQLELEHFEKVEGATLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGWDEGKEKGRIFS 169
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ + G+ + F SM L P +E T ++ AL
Sbjct: 170 YDVTGGRSEEHGFAATGSGSIFARGSMKKLYRPDLTEEQATTLVVQAL 217
>gi|302550295|ref|ZP_07302637.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces viridochromogenes DSM 40736]
gi|302467913|gb|EFL31006.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces viridochromogenes DSM 40736]
Length = 281
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDREKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L SE D T ++ AL
Sbjct: 172 YDVTGGRSEEQGYAATGSGSIFARGAMKKLFRNDLSEADATTLVVQAL 219
>gi|145256886|ref|XP_001401548.1| proteasome component PUP3 [Aspergillus niger CBS 513.88]
gi|134058458|emb|CAL00667.1| unnamed protein product [Aspergillus niger]
gi|358366039|dbj|GAA82660.1| proteasome component Pup3 [Aspergillus kawachii IFO 4308]
Length = 206
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF T +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTFLGLTGLATDVSTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ ++N + + ++ A ++S LYE+R P++V ++ GI+ TGK + +D
Sbjct: 68 FRYKVNMYRLREERNIAPQTLANLVSSSLYEKRFGPFFVSPVIAGINSTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT+++ + + L P S D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASEQLFGTCEGLWEPDLSPEDLFETISQAL 172
>gi|290961684|ref|YP_003492866.1| 20S proteasome subunit beta precursor [Streptomyces scabiei 87.22]
gi|302595789|sp|C9Z4D0.1|PSB_STRSW RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|260651210|emb|CBG74332.1| 20S proteasome beta-subunit precursor [Streptomyces scabiei 87.22]
Length = 281
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D +G ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRNRGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L SE D T ++ AL
Sbjct: 172 YDVTGGRSEESGYAATGSGSIFARGAMKKLFRADLSEADATTLVVQAL 219
>gi|146414175|ref|XP_001483058.1| hypothetical protein PGUG_05013 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + + +GG +A+ G D IA DTR S ++NN K+F++ T +G++G D
Sbjct: 1 MSDPFSINGGAAVAMVGKDCIAIACDTRLGSQSLGLANNFEKVFQMGKTTFLGLTGLATD 60
Query: 65 --SLEVVSRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG 121
+L RL+ + + E + +P +L A ++S LYERR PY+V ++ G+ G
Sbjct: 61 VITLREDFRLKNNLYKLREEREMEPKTL---ANLVSTSLYERRFGPYFVSPIVAGLGKGG 117
Query: 122 KGGVYSYDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+ + +D +G C A + + GT++ + + L P D + I+ AL
Sbjct: 118 QPFICGFDLIG-CIDFAKDFIVSGTASDQLYGTCESLYEPNLEPEDLFETISQAL 171
>gi|253744760|gb|EET00912.1| Proteasome subunit beta type 3 [Giardia intestinalis ATCC 50581]
Length = 207
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G ++ I G D +A+D R S T+ + +IFRL +G++G D L
Sbjct: 8 NGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDVLTTYR 67
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
+++ + N + + + TA+M+S LY+ R PY++ ++ G + GK + + D
Sbjct: 68 QIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDT 127
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESE 163
+G + +++ GT++ F+L + P SE
Sbjct: 128 IGCLDDCTNFQIAGTASDFLLGLCEAHIKPDMSE 161
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++A+D R+S ++S N K+F + + A+ +G++ D L +V
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE G+ +S+ A + S +L+ R PY+ L+ G TG+ G+YS D
Sbjct: 66 LRAEAKLYRAKVGKEMSVKALATLTSNVLHGSRFMPYFGWFLIAG--HTGEPGLYSVDMA 123
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
G + + G+ M + S E+EF M LEE
Sbjct: 124 GGVTEDRFTAAGS-------GMEFAFSILEAEFKE----NMTLEE 157
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 4 AMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMA 63
+M+E + G T + + D ++A++ R++ I S KI+++ ++ A+ +G++
Sbjct: 2 SMIEEKIYKGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVG 61
Query: 64 DSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
D+ + ++ E N + + ++ A + S LL R FPY VQ+L+ GID GK
Sbjct: 62 DAQFLARIIKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK- 120
Query: 124 GVYSYDPVG 132
+YS DP+G
Sbjct: 121 SIYSIDPIG 129
>gi|119175342|ref|XP_001239915.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314835|ref|XP_003067426.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107094|gb|EER25281.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037775|gb|EFW19712.1| proteasome component PUP3 [Coccidioides posadasii str. Silveira]
gi|392870109|gb|EAS27268.2| proteasome component PUP3 [Coccidioides immitis RS]
Length = 206
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF T +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGLTGLATDVASVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ ++N + + ++ A ++S LYE+R P++V +L GI+ TGK + +D
Sbjct: 68 LRYKVNLYRLREERQIAPQTLANLVSSSLYEKRFGPWFVSPVLAGINHTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + L P D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGMCEGLWEPDLGPEDLFETISQAL 172
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I + + A++ R++ I S + KI++L + A+ I+G++ D +
Sbjct: 7 KGTTTVGIICNNGVVFATERRATMGTFIASRDAQKIYKLTDNIAMTIAGSVGDGQRLARI 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
LQ E + P+S+ + +LS +L E + P+YVQVL+ G+D +G +YS DP+
Sbjct: 67 LQVEAKLFELRRHGPMSINALSMLLSNILAETKYMPFYVQVLIGGVDKSGP-RIYSLDPL 125
Query: 132 -GHCEKVAYRLHGTSA 146
G E+V + G+ +
Sbjct: 126 GGRIEEVKFSSTGSGS 141
>gi|387017850|gb|AFJ51043.1| Proteasome subunit beta type-3-like [Crotalus adamanteus]
Length = 205
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVATDFQKIFPMGDRLFIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY + ++ G++ T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPQTLMSMVSNLLYERRFGPYYTEPVIAGLNPVTYEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C + + + GT + M L P
Sbjct: 127 IG-CPMITDDFVVSGTCTEQMYGMCESLWEP 156
>gi|225705784|gb|ACO08738.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++ + + +Q K+F+L ++ + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNVAAHSIVKMKQDQDKVFKLSDKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + D++ +EEL
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKCIEELN 168
>gi|194744578|ref|XP_001954770.1| GF18436 [Drosophila ananassae]
gi|190627807|gb|EDV43331.1| GF18436 [Drosophila ananassae]
Length = 205
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R +S + K+F + + +G++G D L V R
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ + MLS LYE R PY+++ ++ G+D T K + + D
Sbjct: 67 LMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPFICNMDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSP 159
+G C E V + + GT A+ + L P
Sbjct: 127 IG-CPNEPVDFVVAGTCAEQLYGMCETLWRP 156
>gi|315428112|dbj|BAJ49699.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 168
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + I G D +IA++ R + ++S K+F++ N +G +AD ++ +
Sbjct: 17 GATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMIKEV 76
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
A +N +G S+ A++LS L+ R FPY+++ ++ GID G V DP+G
Sbjct: 77 TAVVNLYRLEQGVEPSVKTVAKILSWNLFGNRYFPYFMETIVGGIDSQGP-HVIVLDPLG 135
Query: 133 HCEKVAYRLHGTSAK 147
+ Y + GT A+
Sbjct: 136 SMIEDDYAVVGTGAE 150
>gi|308160496|gb|EFO62983.1| Proteasome subunit beta type 3 [Giardia lamblia P15]
Length = 207
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G ++ I G D +A+D R S T+ + +IFRL +G++G D L
Sbjct: 8 NGSALIGIKGKDCVALAADKRLGCSYQTLTIGKEERIFRLSQSCLLGLAGLQTDVLTTYR 67
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
+++ + N + + + TA+M+S LY+ R PY++ ++ G + GK + + D
Sbjct: 68 QIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDT 127
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESE 163
+G + +++ GT++ F+L + P SE
Sbjct: 128 IGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSE 161
>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
palustris E1-9c]
Length = 211
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M E G T + I D ++A++ R++ I S K++++ ++ + +G + D
Sbjct: 1 MSEAETLKGTTTIGIVFKDGIILATEKRATMGSMIASKRAKKVYQVADRIGMTTAGGVGD 60
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ ++ + E N +G+ +S+ ++ +LS L + R +PYYVQ+L+ G+D TG
Sbjct: 61 AQQLARIMSVECNLYQIRRGRSISVGASSTLLSNYLNQNRGYPYYVQLLVGGVDATGP-S 119
Query: 125 VYSYDPVGHCEK 136
VYS D +G +
Sbjct: 120 VYSVDAMGGATR 131
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
VQ G T + I D ++A++ R S +S+ K+F + ++ A+ +G +AD ++ +
Sbjct: 5 VQIGATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIAD-MQSL 63
Query: 70 SRLQAEINRSA---EAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+R+ +IN A E + +P ++ A++LS++++ RR P++ +VL+ G+D G +
Sbjct: 64 ARI-VKINAKAYELETRKKP-TVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEGN-HLI 120
Query: 127 SYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
DP+G + Y GT AK ++S L + Y + D +A++ L ++
Sbjct: 121 VMDPLGSLIEDNYAALGTGAKL---AISVLDTGYREDITLQDAKKLAVKALKAAIE 173
>gi|209730324|gb|ACI66031.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 200
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++ + + +Q K+F+L ++ + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLPCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + D++ +EEL
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAVDLLKKCVEELN 168
>gi|315045460|ref|XP_003172105.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
gi|311342491|gb|EFR01694.1| proteasome component PUP3 [Arthroderma gypseum CBS 118893]
Length = 212
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 7 EHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSL 66
E+ + GG +A+ G D IA D R VSN KIF T +G++G D
Sbjct: 9 EYVLSDGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVN 68
Query: 67 EVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGV 125
V L+ ++N + + +S A ++S LYE+R P++V +L GI+ TGK +
Sbjct: 69 TVSQLLRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFI 128
Query: 126 YSYDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+D +G C A + + GT++ + + L P D + I+ AL
Sbjct: 129 CGFDSIG-CIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQAL 178
>gi|331697108|ref|YP_004333347.1| proteasome subunit beta [Pseudonocardia dioxanivorans CB1190]
gi|326951797|gb|AEA25494.1| proteasome, beta subunit [Pseudonocardia dioxanivorans CB1190]
Length = 287
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A+ D +IA D R+++ I + K+F + +AVGI+G+ +LE+V
Sbjct: 57 VPHGTTIVALVCADGVVIAGDRRATAGNVIAQRDIEKVFVTDSYSAVGIAGSAGIALEMV 116
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERR--------IFPYYVQVLLVGIDGTG 121
++ + +G PLSL G A L+ ++ + + P +V D +
Sbjct: 117 RLFTVDLEHYEKIEGVPLSLDGKANKLAGMVRQNLGAAMQGFVVVPLFVGYDTDAPDASK 176
Query: 122 KGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G + +YDP G + E + Y G+ + F +++ L P D I A+E L
Sbjct: 177 AGRIVTYDPTGGRYDEWLGYYSVGSGSVFAKSALKKLHDPAN---DLATTIRTAVEAL 231
>gi|50540284|ref|NP_001002609.1| proteasome subunit beta type-2 [Danio rerio]
gi|49900459|gb|AAH75983.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Danio rerio]
Length = 199
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPDF L+A+D ++S+ + ++ K+F+L + + G D+++ +Q
Sbjct: 4 LIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 VQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + D++ LEEL
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDLLKKCLEELN 168
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
VQ G T + I D ++A++ R S +S+ K+F + ++ A+ +G +AD ++ +
Sbjct: 5 VQIGATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGRKVFVIDDKLAIASAGIIAD-MQSL 63
Query: 70 SRLQAEINRSA---EAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+R+ +IN A E + +P ++ A++LS++++ RR P++ +VL+ G+D G +
Sbjct: 64 ARI-VKINAKAYELETRKKP-TVRSMAKLLSVIMFSRRYMPFFAEVLVGGVDEEG-SHLI 120
Query: 127 SYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
DP+G + Y GT AK ++S L + Y + D +A++ L ++
Sbjct: 121 VMDPLGSLIEDNYAALGTGAKL---AISVLDTGYREDITLQDAKKLAVKALKAAIE 173
>gi|388852079|emb|CCF54255.1| probable PUP3-20S proteasome subunit beta3 [Ustilago hordei]
Length = 204
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 3/150 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A G + +IASD R V+ N K+FR+ +T +G+ G +D + +
Sbjct: 7 NGGSVVAAKGKNCVVIASDLRLGQQAMTVACNFDKVFRVTEKTYIGLPGLASDVTTLREK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ +N + + + A+++S LYERR PY+++ ++ GI+ + + + D V
Sbjct: 67 FRYRVNMYKMKEERDIEPEVFAQLVSSTLYERRFGPYFIEPVIAGINSKNEPFIAASDVV 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
G C A + + GT+ + L P
Sbjct: 127 G-CLNFAKDFVVSGTAGDKLFGMAEGLWEP 155
>gi|302533523|ref|ZP_07285865.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. C]
gi|302442418|gb|EFL14234.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. C]
Length = 279
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 50 HGTTIVAATFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 109
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 110 FQLELEHFEKVEGATLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDEAKEKGRIFS 169
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F SM L P SE T ++ AL
Sbjct: 170 YDVTGGRSEEHGYAATGSGSIFARGSMKKLYRPDLSEEQATTLVVQAL 217
>gi|392877590|gb|AFM87627.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ H +G +MA+ G + IASD R +V+ + KI+ + + +G++G D
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGG 124
V RL+ +N +G+ + M+S LLYERR PYYV ++ G+ T +
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 125 VYSYDPVGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+ S D +G C E + + GT ++ M L P D + I+ A+
Sbjct: 121 ICSLDVIG-CPMETDDFVVSGTCSEQMYGMCESLWEPDLESEDLFEPISQAM 171
>gi|302683915|ref|XP_003031638.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
gi|300105331|gb|EFI96735.1| hypothetical protein SCHCODRAFT_15691 [Schizophyllum commune H4-8]
Length = 208
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IASD R + +S + KIF + ++T VG++G +D L + +
Sbjct: 7 NGGSVIAMVGKDCVAIASDLRLGNQAQGISTHFEKIFPVTDRTYVGLAGLASDVLTLREK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG----VYS 127
+ +N + + + A + S LYE R PY+++ ++ G+ T GG + +
Sbjct: 67 FRFRVNMYTIKEEREIQPETFAHLASSTLYEHRFGPYFIEPVIAGMQKTPSGGYKPFIAA 126
Query: 128 YDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
D +G C A + L GT+++ + L P
Sbjct: 127 ADLIG-CLNFAKDFVLAGTASEKLFGVAESLWEP 159
>gi|225704100|gb|ACO07896.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++ + + +Q K+F+L ++ + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + D++ +EEL
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKCIEELN 168
>gi|37779068|gb|AAP20194.1| proteasome subunit [Pagrus major]
Length = 140
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 58/107 (54%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + +A+D R +V+ + K+F + + +G++G D V R
Sbjct: 7 NGGAVMAMRGKNCVAVAADRRFGIQAQMVTTDFQKVFPMGERLYIGLAGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L+ +N +G+ + M+S LLYERR PYY++ ++ G+D
Sbjct: 67 LKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLD 113
>gi|169806330|ref|XP_001827910.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
bieneusi H348]
gi|161779358|gb|EDQ31381.1| 20S proteasome core particle subunit beta 6 [Enterocytozoon
bieneusi H348]
Length = 276
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQ--TAVGISGNMADSL 66
Y +GGT + I + +IA+DTR ++ I + KI ++ + T VG ADS
Sbjct: 74 YEDNGGTTLTIKLQNKLIIAADTRLNAQYNIYTRYSTKIHKIKDYFLTTVGFH---ADSH 130
Query: 67 EVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
++ L ++ + + ++L AE L +LY R FP Y L G + G+ +Y
Sbjct: 131 KIALTLDYQLKQYEQY--DKMTLSALAEFLHHVLYNNRFFPLYSYCCLCGFEN-GEATIY 187
Query: 127 SYDPVGHCEKVAYRLHGT 144
SYD +G +K R++G+
Sbjct: 188 SYDCIGSYQKTECRVNGS 205
>gi|259089098|ref|NP_001158587.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
gi|225705056|gb|ACO08374.1| Proteasome subunit beta type 2 [Oncorhynchus mykiss]
Length = 200
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++ + + +Q K+F+L ++ + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + D++ +EEL
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAMDLLKKCIEELN 168
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++A+D R+S + + N KI ++ A+ +G++ D L +V
Sbjct: 9 KGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRL 68
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE G+ +S+ A +L+ +L R+ PY L+ G D K +YS D +
Sbjct: 69 LRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFD--EKPRLYSVDMM 126
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + Y G+ +F + S L S Y + + I +A+E + +K
Sbjct: 127 GGITEDKYVAAGSGMEF---AYSVLDSEYREDLKVREGIKIAVEAINSAIK 174
>gi|148677981|gb|EDL09928.1| mCG1283 [Mus musculus]
Length = 205
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D +V+ + KIF L ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRCFGIQAQMVTTDFQKIFALGDRLYIGLAGLATDIQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D
Sbjct: 67 LKFRLNLYMLKEGRHIKPFTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKLFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPY 160
+G C V + + GT ++ M L P+
Sbjct: 127 IG-CPMVTDDFVVSGTCSEQMHGMCESLWEPH 157
>gi|427787219|gb|JAA59061.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Rhipicephalus pulchellus]
Length = 205
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IA+D R + G ++ + +IF + + G+ G D+ V R
Sbjct: 7 NGGVVVAMKGKECVAIAADRRLGARGHTIALDFERIFEMGPKLYCGLPGLATDTQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L+ IN +G+ ++ ++S LLYERR PY+VQ ++ G+D
Sbjct: 67 LKFRINLYELREGRLITPKTLGSVISNLLYERRFGPYFVQPIVAGLD 113
>gi|387914628|gb|AFK10923.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ H +G +MA+ G + IASD R +V+ + KI+ + + +G++G D
Sbjct: 1 MSHMSYNGAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDV 60
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGG 124
V RL+ +N +G+ + M+S LLYERR PYYV ++ G+ T +
Sbjct: 61 QTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYVDPVIAGLHPKTFEPF 120
Query: 125 VYSYDPVGHC--EKVAYRLHGTSAKFMLASMSYLLSP-YESE 163
+ S D +G C E + + GT ++ M L P ESE
Sbjct: 121 ICSLDVIG-CPMETDDFVVSGTCSEQMYGMCESLWEPDLESE 161
>gi|219114683|ref|XP_002176500.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402501|gb|EEC42514.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 130
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 87 LSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSA 146
+S P A+MLS LY +R FPYY ++ G+D GKG VYSYD +G E+ Y +G+
Sbjct: 1 MSTPSIAQMLSNTLYYKRFFPYYAFNVMGGVDAQGKGAVYSYDAIGSFERSTYSANGSGQ 60
Query: 147 KFML 150
+++
Sbjct: 61 AYII 64
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++A+D R+S I + N KI ++ A+ +G++ D L +V
Sbjct: 9 KGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRL 68
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE G+ +S+ A +L+ ++ + FPY L+ G D K +YS D V
Sbjct: 69 LRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEKPK--LYSVDMV 126
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + Y G+ +F + S L S Y+ + I +A++ + +K
Sbjct: 127 GGITEDKYATAGSGMEF---AYSILDSEYKDNLTLEEGIKLAVKAINTAIK 174
>gi|255950036|ref|XP_002565785.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592802|emb|CAP99170.1| Pc22g18820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 206
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R +SNN KIF T +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQSLTISNNFPKIFNYAPSTYLGLTGLATDVNTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYE+R PY+V ++ GI+ TGK + +D
Sbjct: 68 FRYKVNMYRLREERDIAPQTLANLVSSSLYEKRFGPYFVSPVIAGINPTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P + D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLAPEDLFETISQAL 172
>gi|442750507|gb|JAA67413.1| Putative 20s proteasome regulatory subunit beta type psmb3/pup3
[Ixodes ricinus]
Length = 205
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IA+D R + G ++ + +IF + + G+SG D V R
Sbjct: 7 NGGVVIAMKGKECIAIAADRRLGARGHTIALDFQRIFEMGPKLYCGLSGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
L+ IN +G+ + + ++S +LYERR PY+ + L+ G+D T + + S D
Sbjct: 67 LKFRINMYELREGRRIKPKTFSSVVSNILYERRFGPYFTEALIAGLDPITNEPYIASTDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C E + + GT + L P + +VI+ AL
Sbjct: 127 IG-CISEPEDFVVSGTCEEQCFGMCEALWEPDLGPDELFEVISQAL 171
>gi|223646410|gb|ACN09963.1| Proteasome subunit beta type-2 [Salmo salar]
gi|223672257|gb|ACN12310.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 200
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++ + + +Q K+F+L ++ + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + D++ +EEL
Sbjct: 124 LAKAPFAAHGHGAYLTLSILDRYYRPDLTRDEAVDLLKKCVEELN 168
>gi|418474067|ref|ZP_13043594.1| 20S proteasome beta-subunit precursor [Streptomyces coelicoflavus
ZG0656]
gi|371545318|gb|EHN73951.1| 20S proteasome beta-subunit precursor [Streptomyces coelicoflavus
ZG0656]
Length = 258
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D G+G ++S
Sbjct: 89 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRGRGRIFS 148
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ +Y G+ + F +M L +E T ++ AL
Sbjct: 149 YDVTGGRSEERSYATTGSGSVFARGAMKKLFRDDLTEEQATTLVVQAL 196
>gi|301110580|ref|XP_002904370.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
gi|262096496|gb|EEY54548.1| proteasome subunit beta type-3, putative [Phytophthora infestans
T30-4]
Length = 204
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+AG D IA DTR V+ + K+FR+ ++T +G++G D V
Sbjct: 7 NGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDVQSVSQL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ +IN + + + + +LS ++YE+R P++V+ ++ G+ K + S D +
Sbjct: 67 LKFKINMYKMNEERDIKPKTLSALLSNMMYEKRFGPWFVEPVIAGLTEDNKPFLSSMDCL 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G CE + + + GT + + + P E D + ++ L
Sbjct: 127 G-CEMMTKDFVVAGTMEEALYGMCESMYKPDMEEEDLFETLSQCL 170
>gi|302561549|ref|ZP_07313891.1| 20S proteasome, beta subunit [Streptomyces griseoflavus Tu4000]
gi|302479167|gb|EFL42260.1| 20S proteasome, beta subunit [Streptomyces griseoflavus Tu4000]
Length = 281
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L SE + T ++ AL
Sbjct: 172 YDVTGGRSEEQGYAATGSGSIFARGAMKKLFRDDLSESEATTLVVQAL 219
>gi|164660346|ref|XP_001731296.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
gi|159105196|gb|EDP44082.1| hypothetical protein MGL_1479 [Malassezia globosa CBS 7966]
Length = 201
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G + IASD R + ++S K+FR+ ++T VG+ G D + +
Sbjct: 4 NGGSVIAMTGKNCVAIASDLRLGNQALLLSTQFDKVFRMTDRTYVGLPGLATDVATLREK 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ +N + + + A+++S LYERR PY+++ ++ G++ + + + D +
Sbjct: 64 FRYRLNMYRMKEDRDIEPETFAKLMSSTLYERRFGPYFIEPVVAGMNSNNEPFIAASDLI 123
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
G C A + + GT++ + L P
Sbjct: 124 G-CLNFAKDFVVSGTASDRLFGMAEGLWEP 152
>gi|449295365|gb|EMC91387.1| hypothetical protein BAUCODRAFT_39558 [Baudoinia compniacensis UAMH
10762]
Length = 206
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G + IA D R VSNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMRGKNCVAIACDLRLGLQSLTVSNNFPKIFQYSPTAFLGLTGLATDVSTVSEL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ ++N + + ++ A+++S LYERR P++V ++ GIDG +G + +D
Sbjct: 68 FRYKVNMYRLREERDIAPKTFAQLVSSSLYERRFGPWFVSPVVAGIDGKSGAPFICGFDS 127
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G + A + + GT++ + + L P D + I+ AL
Sbjct: 128 IGCIDYAADFIVSGTASDQLFGTCEGLWEPDLEPDDLFETISQAL 172
>gi|321456221|gb|EFX67334.1| hypothetical protein DAPPUDRAFT_231791 [Daphnia pulex]
Length = 205
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G IASD R + ++ + +IF + +G+ G D+L V R
Sbjct: 7 NGGCVLAMKGKGCVAIASDRRFGVQTSTLAMDFQRIFEMGPHLYIGLPGLATDTLTVHER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
L+ +N + + + + M+S LLYERR PY+V+ ++ G+D T + + + D
Sbjct: 67 LRFRLNLYELRESRKIKPQTFSAMVSNLLYERRFGPYFVEPVIAGLDPVTWEPFISAMDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT A+ + L P D + I+ AL
Sbjct: 127 IG-CPNMPEDFVVAGTCAEQLFGMCEALWEPNLEPDDLFETISQAL 171
>gi|156036470|ref|XP_001586346.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980]
gi|154698329|gb|EDN98067.1| hypothetical protein SS1G_12924 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 206
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + +S A ++S LYERR P++V ++ G+D TGK + +D
Sbjct: 68 FRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVIAGLDQKTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQAL 172
>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
Length = 212
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T + + D+ ++A+D R+++ I S KI +L + A+ ISG +AD+ +
Sbjct: 18 HGTTTVGLIAGDYVVLAADKRATAGTLIASRTVKKIVKLTDYAAMTISGLVADAQALADA 77
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++ E +G+ LS+ G A +L+ +L + FPY VQ+++ G D +Y+ DP
Sbjct: 78 VREEARYYELDRGKRLSVYGMATLLANILSSSKYFPYLVQLIVGGYDTAPH--LYAIDPY 135
Query: 132 GHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVV 181
G EKV G+ ++ L Y+ D + +A E + +
Sbjct: 136 GGVTEEKVTSTGSGSP-----VALGVLERGYKEGISLDDAVNLAAEAIRSAI 182
>gi|456385863|gb|EMF51416.1| prcB protein [Streptomyces bottropensis ATCC 25435]
Length = 258
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 89 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGFDVDRDKGRIFS 148
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L SE + T ++ AL
Sbjct: 149 YDVTGGRSEESGYAATGSGSIFARGAMKKLYRADLSEDEATTLVIQAL 196
>gi|117928395|ref|YP_872946.1| proteasome subunit beta [Acidothermus cellulolyticus 11B]
gi|302595815|sp|A0LU50.1|PSB_ACIC1 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|117648858|gb|ABK52960.1| proteasome endopeptidase complex, beta component [Acidothermus
cellulolyticus 11B]
Length = 290
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 12/177 (6%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A+A ++A D R++ I + K+F+ + VGI+G+ +LEVV
Sbjct: 55 VPHGTTIVAVAYQGGVVMAGDRRATMGNVIAQRDIEKVFQTDEHSCVGIAGSAGIALEVV 114
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTG 121
Q E+ + +G LSL G A L++++ + P + L D
Sbjct: 115 RLFQVELEHYEKLQGTTLSLEGKANRLAMMIRANLPMALQGLAVVPLFAGYDLFADDPQR 174
Query: 122 KGGVYSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G ++S+D G E+ ++ G+ + F ++ L + +FD + +E L
Sbjct: 175 AGRIFSFDVTGGRYEEHSFHAVGSGSTFARGALKKL---FRDDFDEPHAVRTCIEAL 228
>gi|453082236|gb|EMF10284.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 206
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF + T +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFPFGSSTYLGLTGLATDVSTVSEL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ ++N + + +S A ++S LYE+R P+++ ++ G+D TGK + +D
Sbjct: 68 FRYKVNMYRLREERDISPRTFANLVSSSLYEKRFGPWFISPVVAGLDSKTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + ++ AL
Sbjct: 128 IG-CIDFAKDFIVAGTASDQLFGTCEGLWEPDLGPEDLFETMSQAL 172
>gi|383649803|ref|ZP_09960209.1| proteasome subunit beta [Streptomyces chartreusis NRRL 12338]
Length = 281
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDREKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L SE + T ++ AL
Sbjct: 172 YDVTGGRSEEQGYAATGSGSIFARGAMKKLFREDLSEDEATTLVVQAL 219
>gi|449016282|dbj|BAM79684.1| 20S core proteasome subunit beta 3 [Cyanidioschyzon merolae strain
10D]
Length = 207
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 8/128 (6%)
Query: 8 HYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLE 67
HY +GG V A G IA+D R ++ + ++FR+ ++ +G++G D L
Sbjct: 8 HY--NGGAVFAATGNQCVAIAADRRFGQAQLTLACDANRLFRVHDRLVLGLTGLATDCLT 65
Query: 68 VVSRLQAEIN--RSAEAKGQPLSLPGT-AEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ R++ N R E K +P P T + ++S LLYERR PY+V+ ++VG+ G K
Sbjct: 66 LAERVRMRTNLYRLGE-KREPK--PATISALVSALLYERRFAPYFVEPVIVGLSGDNKPY 122
Query: 125 VYSYDPVG 132
S D +G
Sbjct: 123 CCSMDLLG 130
>gi|348667371|gb|EGZ07196.1| hypothetical protein PHYSODRAFT_288866 [Phytophthora sojae]
Length = 204
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+AG D IA DTR V+ + K+FR+ ++T +G++G D V
Sbjct: 7 NGAAIIAMAGKDCVGIACDTRLGMQAQTVAMDFQKVFRVTDKTFLGLAGLATDVQSVSQL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ ++N + + + + +LS ++YE+R P++V+ ++ G+ K + S D +
Sbjct: 67 LKFKLNMYKMNEEREIKPKTLSALLSSMMYEKRFGPWFVEPVIAGLTEDNKPFLSSMDCL 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G CE + + + GT + + + P E D + ++ L
Sbjct: 127 G-CEMMTKDFVVAGTMEEALYGMCESMYKPDMEEEDLFETLSQCL 170
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++A+D R+S ++S N K+F + + A+ +G++ D L +V
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRL 65
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE G+ +S+ A + S +L+ R PY+ L+ G D K G+YS D
Sbjct: 66 LRAEAKLYRARVGKEMSVKALATLTSNVLHGNRFMPYFGWFLIAGHD--EKPGLYSIDMA 123
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + + G+ +F + S L Y + + +AL + +
Sbjct: 124 GGVTEDKFTAAGSGMEF---AFSILEENYREDMPLEGGVKLALRAIKAATR 171
>gi|402589044|gb|EJW82976.1| proteasome subunit beta type [Wuchereria bancrofti]
Length = 205
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGT++A+AG D IASD R T ++ N K+ +L + +G+ G +D+ V+ ++
Sbjct: 8 GGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFNSDAKTVLDKI 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPV 131
N + + + TA M+S LLY+ R Y+ + L+ G+D T K + + D +
Sbjct: 68 TFRKNLYELRENRKIKPEVTAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPYICAMDTI 127
Query: 132 G 132
G
Sbjct: 128 G 128
>gi|395532536|ref|XP_003768326.1| PREDICTED: proteasome subunit beta type-3 [Sarcophilus harrisii]
Length = 205
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 7 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+ T + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPNTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 156
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + + D ++A+D R+S I K++++ + A+ I+G++ D+ +V
Sbjct: 5 KGTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRA 64
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L AE G+ +S A +LS +L+ R+FP+ Q+++ G D T ++S DP+
Sbjct: 65 LIAEARLYKMRTGKNISPRACATLLSNILHSSRMFPFLTQIIIGGYDLTDGPKLFSLDPL 124
Query: 132 G 132
G
Sbjct: 125 G 125
>gi|125778116|ref|XP_001359838.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|195157484|ref|XP_002019626.1| GL12496 [Drosophila persimilis]
gi|54639588|gb|EAL28990.1| GA11308 [Drosophila pseudoobscura pseudoobscura]
gi|194116217|gb|EDW38260.1| GL12496 [Drosophila persimilis]
Length = 205
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R +S + K+F + + +G++G D L V R
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ + MLS LYE R PY+++ ++ G+D T K V + D
Sbjct: 67 LMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTLKPFVCNMDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSP 159
+G C E + + GT A+ + L P
Sbjct: 127 IG-CPNEPDDFVVAGTCAEQLYGMCETLWKP 156
>gi|410084182|ref|XP_003959668.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
gi|372466260|emb|CCF60533.1| hypothetical protein KAFR_0K01790 [Kazachstania africana CBS 2517]
Length = 205
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLEVV 69
+GG V+A+AG D IA D R S VSNN KIF GI+G D +L V
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFNY-EHVFFGITGLATDVTTLNEV 66
Query: 70 SRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYS 127
R + + + E + +P + A+++S LYERR PY+V ++ GI+ +GK +
Sbjct: 67 FRYKTNLYKLKEDRAIEPETF---AQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAG 123
Query: 128 YDPVGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+D +G ++ + + GT++ + L P D + I+ AL
Sbjct: 124 FDLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQAL 171
>gi|294628476|ref|ZP_06707036.1| 20S proteasome beta-subunit [Streptomyces sp. e14]
gi|292831809|gb|EFF90158.1| 20S proteasome beta-subunit [Streptomyces sp. e14]
Length = 281
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L SE + T ++ AL
Sbjct: 172 YDVTGGRSEEHGYAATGSGSIFARGAMKKLYREDLSEAEATTLVVQAL 219
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
+ + G T + + + ++A++ R++ I S K++++ ++ + +G + D+
Sbjct: 4 INQEIMKGTTTVGLVFDEGIVLATEKRATMGTLIASKTAKKVYQIADRIGMTTAGGVGDA 63
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+ +Q E + G+P+S+ A +LS L + R +PYYVQ+L+ G+D G V
Sbjct: 64 QSLARLMQVECSLYKVRHGKPISVGAAATLLSNYLQQNRYYPYYVQLLVGGVDRNGP-SV 122
Query: 126 YSYDPVGHCEK 136
YS D +G K
Sbjct: 123 YSVDAMGGASK 133
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 7 EHY-VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
EH V+ G T + I ++A++ R++ I S K+ + ++ + I+G + D+
Sbjct: 4 EHQDVKTGTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAITDKIGMTIAGGVGDA 63
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
++V + E N +GQ +S+ A +LS L + R PYYVQ+L+ G+D +G V
Sbjct: 64 QQLVRIINVECNLYEIRRGQKISVGAAATILSNYLNQNRFSPYYVQLLVGGVDTSGP-SV 122
Query: 126 YSYDPVG 132
YS D G
Sbjct: 123 YSVDAAG 129
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I + ++A++ R++ I S + KI++L + A+ I+G++ D +
Sbjct: 7 KGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDGQRLARM 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
LQAE + P+S+ + +LS LL+E RIF Y+QVL+ G+D +G ++S DP
Sbjct: 67 LQAESKLFELRRHGPMSINALSMLLSNLLWEYRIF--YIQVLVGGVDKSGP-KLFSLDPA 123
Query: 132 G 132
G
Sbjct: 124 G 124
>gi|260809319|ref|XP_002599453.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
gi|229284732|gb|EEN55465.1| hypothetical protein BRAFLDRAFT_281217 [Branchiostoma floridae]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G D IA+D R VS + KIF++ ++ +G+ G D V +R
Sbjct: 7 NGAAIIAMVGKDCVAIAADRRFGVQAQTVSMDFQKIFQMGDRLFLGLPGLATDVQTVSNR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
++ +N + + + M+S LLYERR PY+V+ ++ G+D T + + S D
Sbjct: 67 MKFRLNLYELREARQVKPKTFLSMVSNLLYERRFGPYFVEPVVAGLDPKTFEPFIASCDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT ++ M L P D + I+ AL
Sbjct: 127 IG-CPMIPEDFVVSGTCSEQMYGMCESLWEPNLEPDDLFETISQAL 171
>gi|327304369|ref|XP_003236876.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459874|gb|EGD85327.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 214
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSN KIF T +G++G D V
Sbjct: 16 NGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 75
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ ++N + + +S A ++S LYE+R P++V +L GI+ TGK + +D
Sbjct: 76 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 135
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 136 IG-CIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQAL 180
>gi|385268564|gb|AFI56377.1| 20S proteasome beta-subunit [Streptomyces sp. JS360]
Length = 281
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D GKG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRGKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ + G+ + F +M L SE T ++ AL
Sbjct: 172 YDVTGGRSEEHNFASTGSGSIFARGAMKKLFRDDLSEEQATTLVVQAL 219
>gi|118576729|ref|YP_876472.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|118195250|gb|ABK78168.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 195
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
Query: 17 MAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEI 76
M I D ++ +D R+S+ I +NN +KI R+ + + ++G +AD+ +V L+
Sbjct: 1 MGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVLRYHA 60
Query: 77 NRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEK 136
+ K P+ + A + SL+ ++ R +P+ +L+ G D G +Y+ D G E+
Sbjct: 61 SLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAVGP-ALYNIDMFGSVEE 119
Query: 137 VAYRLHGTSA 146
+Y G+ +
Sbjct: 120 KSYVTTGSGS 129
>gi|195395370|ref|XP_002056309.1| GJ10880 [Drosophila virilis]
gi|194143018|gb|EDW59421.1| GJ10880 [Drosophila virilis]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R +S + K+F + + +G++G D L V R
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ + MLS LYE R PY+++ ++ G+D T K + + D
Sbjct: 67 LMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSP 159
+G C E + + GT A+ + L P
Sbjct: 127 IG-CPNEPDDFVVAGTCAEQLYGMCETLWRP 156
>gi|326472712|gb|EGD96721.1| proteasome subunit beta type-3 [Trichophyton tonsurans CBS 112818]
gi|326482041|gb|EGE06051.1| proteasome component PUP3 [Trichophyton equinum CBS 127.97]
Length = 206
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSN KIF T +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ ++N + + +S A ++S LYE+R P++V +L GI+ TGK + +D
Sbjct: 68 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 128 IG-CIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQAL 172
>gi|344249385|gb|EGW05489.1| Proteasome subunit beta type-1 [Cricetulus griseus]
Length = 140
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 82 AKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRL 141
+ + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+DPVG ++ +++
Sbjct: 5 SNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKA 64
Query: 142 HGTSAKFM 149
G+++ +
Sbjct: 65 GGSASAML 72
>gi|149047100|gb|EDL99820.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
[Rattus norvegicus]
gi|149047101|gb|EDL99821.1| proteasome (prosome, macropain) subunit, beta type 1, isoform CRA_b
[Rattus norvegicus]
Length = 140
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 82 AKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRL 141
+ + ++ A MLS +LY RR FPYYV ++ G+D GKG VYS+DPVG ++ +++
Sbjct: 5 SNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKA 64
Query: 142 HGTSAKFM 149
G+++ +
Sbjct: 65 GGSASAML 72
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 3/166 (1%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
++ G T A+ D ++A+DTR+S+ I + +KI ++ A+ I+G +AD+ +V
Sbjct: 16 IKKGTTTCALTCKDGVVLAADTRASAGLFIADRHVMKIQKVDQHLAMTIAGGVADAQNLV 75
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
++ N + + + A + S +L+ +R FPYYVQ+++ G +++ D
Sbjct: 76 DTMRYNANLYRFQNKELMPVKSAARLCSNILFNQRYFPYYVQIIMAGYTKNEGSQIHNID 135
Query: 130 PVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALE 175
G + G+ + + YL S Y D +A++
Sbjct: 136 LFGSMTTEKFISTGSGSP---VAYGYLESEYRDGMSVNDAYKVAMQ 178
>gi|291440639|ref|ZP_06580029.1| 20S proteasome beta-subunit [Streptomyces ghanaensis ATCC 14672]
gi|291343534|gb|EFE70490.1| 20S proteasome beta-subunit [Streptomyces ghanaensis ATCC 14672]
Length = 281
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D +G ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDQGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L SE + T ++ AL
Sbjct: 172 YDVTGGRSEEQGYAATGSGSIFARGAMKKLFRDDLSEAEATTLVVQAL 219
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + + D + A++TR++ I KIF++ + I+G ++D+ ++
Sbjct: 8 KGTTTVGLTCKDGVVFATETRATMGNLIAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKY 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++AE+ G+ +++ A + S +L+ R +P+YVQ LL G+D G +YS DP
Sbjct: 68 IRAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVDDKGP-ALYSLDPT 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|195038067|ref|XP_001990482.1| GH18224 [Drosophila grimshawi]
gi|193894678|gb|EDV93544.1| GH18224 [Drosophila grimshawi]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R +S + K+F + + +G++G D L V R
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ + MLS LYE R PY+++ ++ G+D T K + + D
Sbjct: 67 LMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSP 159
+G C E + + GT A+ + L P
Sbjct: 127 IG-CPNEPDDFVVAGTCAEQLYGMCETLWRP 156
>gi|261201474|ref|XP_002627137.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239592196|gb|EEQ74777.1| 20S proteasome peptidase [Ajellomyces dermatitidis SLH14081]
gi|239611645|gb|EEQ88632.1| proteasome component Pup3 [Ajellomyces dermatitidis ER-3]
gi|327348342|gb|EGE77199.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 192
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF T +G++G D V L+ ++N
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDPVGHCEKV 137
+ + +S A + S LYE+R PY+V +L GID TGK + +D +G C
Sbjct: 61 YRLREERHISPKTLANLTSSTLYEKRFGPYFVSPVLAGIDNTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + + L P D + I+ AL
Sbjct: 120 AQDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQAL 158
>gi|195111548|ref|XP_002000340.1| GI10178 [Drosophila mojavensis]
gi|193916934|gb|EDW15801.1| GI10178 [Drosophila mojavensis]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R +S + K+F + + +G++G D L V R
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ + MLS LYE R PY+++ ++ G+D T K + + D
Sbjct: 67 LMFRKNIYETKENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPKTMKPFICNMDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSP 159
+G C E + + GT A+ + L P
Sbjct: 127 IG-CPNEPDDFVVAGTCAEQLYGMCETLWRP 156
>gi|336376544|gb|EGO04879.1| hypothetical protein SERLA73DRAFT_173986 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389555|gb|EGO30698.1| hypothetical protein SERLADRAFT_454981 [Serpula lacrymans var.
lacrymans S7.9]
Length = 208
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 7/169 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IASD R + +S+N K+F + ++ VG+ G D + R
Sbjct: 7 NGGSVIAMVGKDCVAIASDLRLGNQALSISSNFQKVFPVTDRIYVGLPGLGTDVTTLRER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY----S 127
+ IN + + + A ++S LYE R PY+++ ++ G+ T GGV +
Sbjct: 67 FRYRINMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFIEPVIAGLSKTPSGGVKPLIAA 126
Query: 128 YDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
D +G C A + + GT++ +L L P D + I+ L
Sbjct: 127 ADLIG-CLNFAKDFVVAGTASTKLLGVAEGLWEPDLEPEDLFETISQTL 174
>gi|126308249|ref|XP_001371633.1| PREDICTED: proteasome subunit beta type-3-like [Monodelphis
domestica]
Length = 202
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ G + IA+D R +V+ + KIF + ++ +G++G D V R
Sbjct: 4 NGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQR 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G+ + M++ LLYE+R PYY + ++ G+ T + + S D
Sbjct: 64 LKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLHPKTFEPFICSLDL 123
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 124 IG-CPMVTDDFVVSGTCSEQMYGMCESLWEP 153
>gi|443628819|ref|ZP_21113159.1| putative proteasome subunit beta [Streptomyces viridochromogenes
Tue57]
gi|443337690|gb|ELS51992.1| putative proteasome subunit beta [Streptomyces viridochromogenes
Tue57]
Length = 258
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 89 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRAKGRIFS 148
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L ++ + T ++ AL
Sbjct: 149 YDVTGGRSEEQGYAATGSGSIFARGAMKKLFRADLTQAEATTLVVQAL 196
>gi|302764110|ref|XP_002965476.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
gi|302823097|ref|XP_002993203.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300138973|gb|EFJ05723.1| hypothetical protein SELMODRAFT_272317 [Selaginella moellendorffii]
gi|300166290|gb|EFJ32896.1| hypothetical protein SELMODRAFT_266913 [Selaginella moellendorffii]
Length = 204
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
+ +G ++A+ G D IASD R N ++ + +IF++ ++ VG++G +D +
Sbjct: 4 FTYNGSALVAMVGKDCFAIASDRRLGVNFQTIATDFQRIFKIHDKLYVGLAGLASDVQTL 63
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
RL+ N + + + + +S LYE+R PY+VQ L+ G+ K + +
Sbjct: 64 YQRLKYRHNLFQLQEERDMRPETFSNFVSATLYEKRFGPYFVQPLIAGLGADNKPYICTM 123
Query: 129 DPVGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
D +G E + + GT+++ + + + P D + I+ AL
Sbjct: 124 DSIGAIEHSKDFVVGGTASESLYGACESMYKPDMEPEDLFETISQAL 170
>gi|323448817|gb|EGB04711.1| hypothetical protein AURANDRAFT_55099 [Aureococcus anophagefferens]
Length = 274
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GG++ A G FALIA+D++ I S+ ++ L + +G SG AD +
Sbjct: 54 YANNGGSLAAACGHGFALIAADSQFLHGMMITSSVFDRVVPLSDVVLMGTSGCAADCESM 113
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
++ E R + A++ S +Y RR FP+++ +++ G+D G G V+ +
Sbjct: 114 THDVRTEAERYIVGAKLSMDASVAAQLCSGAMYARRGFPHHMSLVVCGLDSVGFGRVFVF 173
Query: 129 DPVG 132
D +G
Sbjct: 174 DSIG 177
>gi|296805183|ref|XP_002843416.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
gi|238844718|gb|EEQ34380.1| proteasome component PUP3 [Arthroderma otae CBS 113480]
Length = 223
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
GG +A+ G D IA D R VSN KIF T +G++G D V
Sbjct: 25 DGGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQL 84
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ ++N + + +S A ++S LYE+R P++V +L GI+ TGK V +D
Sbjct: 85 LRYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFVCGFDS 144
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 145 IG-CIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQAL 189
>gi|408533144|emb|CCK31318.1| Proteasome subunit beta [Streptomyces davawensis JCM 4913]
Length = 258
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 89 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDKGRIFS 148
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L +E + T ++ AL
Sbjct: 149 YDVTGGRSEEQGYAATGSGSIFARGAMKKLFRNDLNEDEATTLVVQAL 196
>gi|302662910|ref|XP_003023105.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
gi|291187083|gb|EFE42487.1| hypothetical protein TRV_02795 [Trichophyton verrucosum HKI 0517]
Length = 212
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GG +A+ G D IA D R VSN KIF T +G++G D V L
Sbjct: 15 GGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQLL 74
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPV 131
+ ++N + + +S A ++S LYE+R P++V +L GI+ TGK + +D +
Sbjct: 75 RYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDSI 134
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C A + + GT++ + + L P D + I+ AL
Sbjct: 135 G-CIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQAL 178
>gi|125564290|gb|EAZ09670.1| hypothetical protein OsI_31953 [Oryza sativa Indica Group]
Length = 178
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 50 LPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY 109
+ ++ A+ SG D + L A + +S P A++LS LY +R FPYY
Sbjct: 7 IADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYY 66
Query: 110 VQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFML 150
+L G+D GKG V++YD VG E+ Y GT + ++
Sbjct: 67 AFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGSALIM 107
>gi|424814263|ref|ZP_18239441.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
gi|339757879|gb|EGQ43136.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
Length = 216
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Query: 25 ALIASDTRSSSNGTIVSNNQL-KIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAK 83
A++A+D R++ G +VSN KI+ L ++ + I+G++ D+ +VV +++++N + +
Sbjct: 29 AILAADKRAALGGRLVSNKHAQKIYELDDEIGLTIAGSVGDAQKVVRMMRSQLNMK-KLE 87
Query: 84 GQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+ LS+ G +L+ +L+ ++ P+ Q +L GI G+G +YS DP G
Sbjct: 88 TRELSVKGAGTLLANILHANKMMPFMNQFVLGGIQ-EGEGILYSLDPAG 135
>gi|402225130|gb|EJU05191.1| 20S proteasome subunit beta 3 [Dacryopinax sp. DJM-731 SS1]
Length = 205
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G + IASD R + V+ N K+F + + G++G D + + R
Sbjct: 7 NGGSVVAMKGKNCVAIASDLRLGNQAMTVATNFEKVFPVTDSLYCGLAGLATDVITLRER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI-DGTGKGGVYSYDP 130
+ +N + + + A+++S LYERR PY+V+ ++ GI TG+ + + D
Sbjct: 67 FRYRVNMYTIKEERQIEPATFAQLVSSTLYERRFGPYFVEPVIAGISKKTGEPFIAAADL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + L P + D + I+ L
Sbjct: 127 IG-CLNFAKDFVVCGTASDKLFGVAEGLWEPDMAAEDLFETISQTL 171
>gi|302501602|ref|XP_003012793.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
gi|291176353|gb|EFE32153.1| hypothetical protein ARB_01044 [Arthroderma benhamiae CBS 112371]
Length = 212
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GG +A+ G D IA D R VSN KIF T +G++G D V L
Sbjct: 15 GGACVAMVGKDCVAIACDLRLGLQALTVSNEFPKIFNYAPSTYLGLTGLATDVNTVSQLL 74
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPV 131
+ ++N + + +S A ++S LYE+R P++V +L GI+ TGK + +D +
Sbjct: 75 RYKVNLYRLREERNISPQTLANLVSSSLYEKRFGPFFVSPVLAGINHTTGKPFICGFDSI 134
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C A + + GT++ + + L P D + I+ AL
Sbjct: 135 G-CIDFAKNFIVSGTASDQLYGTCESLWEPDLEPEDLFETISQAL 178
>gi|440492147|gb|ELQ74741.1| 20S proteasome, regulatory subunit beta type PSMB3/PUP3
[Trachipleistophora hominis]
Length = 205
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G A+I SD R +N VS +++++ ++ VG++ + D +V +
Sbjct: 8 YGGSVLALTGKHSAIIVSDKRLGNNSITVSTQHDRVYKMSDKVYVGMTLFVPDVQMLVRK 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ E+N + + + + +LS LY R P +V ++ GID K + S D +
Sbjct: 68 LRMEVNLFEIEENRRIDPDEFSSLLSYTLYSHRFSPRFVDPVVAGIDAHDKPYICSMDLL 127
Query: 132 GHCEKVA 138
G C+ +
Sbjct: 128 G-CQSTS 133
>gi|37778970|gb|AAP20145.1| 20S proteasome beta 6 subunit [Pagrus major]
Length = 135
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 93 AEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
A MLS +LY RR FPYYV ++ G+D GKG VYS+DPVG ++ Y+ G+++ +
Sbjct: 11 AAMLSTILYGRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDTYKAGGSASAML 67
>gi|170085607|ref|XP_001874027.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
gi|164651579|gb|EDR15819.1| 20S proteasome subunit beta 3 [Laccaria bicolor S238N-H82]
Length = 208
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IASD R + +S+N KIF + ++ +G+ G D + R
Sbjct: 7 NGGSVVAMVGKDCVAIASDLRLGNQALGISSNFQKIFPITDRIYLGLPGLATDVTTLRER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ +N + + + A ++S LYE R PY+V+ ++ G+ T GGV +
Sbjct: 67 FRFRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFVEPVMAGLSKTPSGGVKPF 123
>gi|403737658|ref|ZP_10950386.1| 20S proteasome beta-subunit [Austwickia chelonae NBRC 105200]
gi|403191770|dbj|GAB77156.1| 20S proteasome beta-subunit [Austwickia chelonae NBRC 105200]
Length = 272
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+A ++A D R++S I + K+F + VGISG + E+V+
Sbjct: 49 HGTTIVAVAFDGGVVMAGDRRATSGNLIANRTIDKVFVADESSLVGISGVAGVATEMVAL 108
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ-----VLLVGIDG-TGKGGV 125
Q E+ + +G PLSL G A L ++ R P ++ L G DG TG+ +
Sbjct: 109 FQVELEHYEKIEGTPLSLEGRANRLRTMI--RGNLPLALRGLGVVPLFAGYDGHTGR--I 164
Query: 126 YSYDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+SYD G C E+ Y G+ + F ++ L P D + +A+E L
Sbjct: 165 FSYDVAGGCYEEHDYAGVGSGSLFARGALKKLWHP---TLDADTALRIAVEAL 214
>gi|386387426|ref|ZP_10072444.1| proteasome subunit beta [Streptomyces tsukubaensis NRRL18488]
gi|385665137|gb|EIF88862.1| proteasome subunit beta [Streptomyces tsukubaensis NRRL18488]
Length = 281
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P +IA D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVIAGDRRATMGNMISQRDMEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A LS ++ R +Q L V G D G +G +
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMI--RGNLGMAMQGLAVVPLFAGYDVGRERGRI 169
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+SYD G E+ Y G+ + F S+ L Y + +T+ ++ L
Sbjct: 170 FSYDVTGGRFEEQGYTATGSGSVFARGSLKKL---YRDDLTKEQAVTLVVQAL 219
>gi|359144161|ref|ZP_09178230.1| proteasome subunit beta [Streptomyces sp. S4]
Length = 258
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVASTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEHSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L VG D +G ++S
Sbjct: 89 FQLELEHFEKVEGAALSLEGKANRLSTMIRSNLGMAMQGLAVVPLFVGYDVDRERGRIFS 148
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F SM L +E T ++ AL
Sbjct: 149 YDVTGGRSEEHGYAATGSGSTFARGSMKKLYRDDLTEEQATTLVVQAL 196
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 9/175 (5%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M E Y G T + I D ++A++ R + +S++ K+F + ++ A+ +G +AD
Sbjct: 1 MSEEY-NVGATAVGIRAKDGVVLAAEKRITYGFYSLSSSGKKVFIVNDRMAIASAGVIAD 59
Query: 65 --SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
+L + R+ A++ +AK +P S+ A++LS++++ RR P+ +VL+ G D G
Sbjct: 60 MQTLAKILRVNAKMY-ELDAKRKP-SVAAMAKLLSIIMFNRRWMPFIAEVLVGGYDEEGP 117
Query: 123 GGVYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
V+ DPVG + Y GT AK ++ L S Y+ + D + +A+ +
Sbjct: 118 -HVFVLDPVGSLIEDDYAALGTGAKM---AIGILDSGYKKDIDVVEARKLAINAI 168
>gi|348519415|ref|XP_003447226.1| PREDICTED: proteasome subunit beta type-2-like [Oreochromis
niloticus]
Length = 199
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++S+ + ++ K+F+L + + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 VQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDDTDGPGLYYMDHLSS 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K + HG A L+ + P S + D++ +EEL
Sbjct: 124 LAKAPFAAHGYGAYLTLSILDRYYRPDLSRDEAVDLLKKCVEEL 167
>gi|269126673|ref|YP_003300043.1| 20S proteasome subunits A and B [Thermomonospora curvata DSM 43183]
gi|302595729|sp|D1A3V2.1|PSB2_THECD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
gi|268311631|gb|ACY98005.1| 20S proteasome A and B subunits [Thermomonospora curvata DSM 43183]
Length = 280
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ HG T++A+ P+ ++A D R++S I + K+ R +AV ++G + +LE++
Sbjct: 49 IPHGTTIVAVRYPEGVMLAGDRRATSGNLIAQKDLEKVHRADEHSAVAMAGTVGLALEMI 108
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKG 123
LQ E+ + + LSLPG A L ++ R + +Q L V G D G G
Sbjct: 109 RLLQVELEHYEKLQSAKLSLPGKARRLGAVI--RANLAHAMQGLAVVPVFAGYDLDAGVG 166
Query: 124 GVYSYDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDV 169
+Y+YD G E + G+ + F ++ L P +E + V
Sbjct: 167 RIYNYDITGMPQESRDFHAEGSGSPFARGALKKLYRPDLTEAEAAAV 213
>gi|367001775|ref|XP_003685622.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
gi|357523921|emb|CCE63188.1| hypothetical protein TPHA_0E00940 [Tetrapisispora phaffii CBS 4417]
Length = 205
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLEVV 69
+GG V+A+AG D IA D R S VSNN KIF GI+G D +L V
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFNY-GHVFFGITGLATDVTTLNEV 66
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSY 128
R + + + E + P+ +++S LYE+R PY+V ++ GI+ +GK + +
Sbjct: 67 FRYKTNLYKLKEER--PIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAGF 124
Query: 129 DPVGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
D +G ++ + + GT++ + L P D + I+ AL
Sbjct: 125 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQAL 171
>gi|269972971|emb|CBE67030.1| CG11981-PA [Drosophila atripex]
gi|269973424|emb|CBE66639.1| CG11981-PA [Drosophila ananassae]
gi|269973426|emb|CBE66640.1| CG11981-PA [Drosophila ananassae]
gi|269973428|emb|CBE66641.1| CG11981-PA [Drosophila ananassae]
gi|269973430|emb|CBE66642.1| CG11981-PA [Drosophila ananassae]
gi|269973432|emb|CBE66643.1| CG11981-PA [Drosophila ananassae]
gi|269973434|emb|CBE66644.1| CG11981-PA [Drosophila ananassae]
gi|269973436|emb|CBE66645.1| CG11981-PA [Drosophila ananassae]
gi|269973438|emb|CBE66646.1| CG11981-PA [Drosophila ananassae]
gi|269973440|emb|CBE66647.1| CG11981-PA [Drosophila ananassae]
gi|269973442|emb|CBE66648.1| CG11981-PA [Drosophila ananassae]
gi|269973444|emb|CBE66649.1| CG11981-PA [Drosophila ananassae]
gi|269973446|emb|CBE66650.1| CG11981-PA [Drosophila ananassae]
Length = 205
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R +S + K+F + + +G++G D L V R
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ + MLS LYE R PY+++ ++ G+D T K + + D
Sbjct: 67 LMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFIEPVVAGLDPHTLKPFICNMDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSP 159
+G C E + + GT A+ + L P
Sbjct: 127 IG-CPNEPDDFVVAGTCAEQLYGMCETLWRP 156
>gi|68470996|ref|XP_720505.1| hypothetical protein CaO19.2755 [Candida albicans SC5314]
gi|68471452|ref|XP_720274.1| hypothetical protein CaO19.10269 [Candida albicans SC5314]
gi|46442133|gb|EAL01425.1| hypothetical protein CaO19.10269 [Candida albicans SC5314]
gi|46442375|gb|EAL01665.1| hypothetical protein CaO19.2755 [Candida albicans SC5314]
Length = 127
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Query: 6 LEH----YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGN 61
+EH Y +GGTV+ IAG DFA++A DTR +I S + KI + + + +G
Sbjct: 21 IEHRFNPYSDNGGTVLGIAGEDFAVLAGDTRQVEGYSIQSRYESKIHDVGDDILMTANGF 80
Query: 62 MADSLEVVSRL-QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFP 107
AD + ++ R Q+ I + G+ L++ A + LLY +R FP
Sbjct: 81 AADGVALIDRFKQSLIWYKFDNNGKKLAIKSAARYIQQLLYGKRFFP 127
>gi|291450471|ref|ZP_06589861.1| 20S proteasome beta-subunit [Streptomyces albus J1074]
gi|421741430|ref|ZP_16179626.1| proteasome endopeptidase complex, beta component [Streptomyces sp.
SM8]
gi|291353420|gb|EFE80322.1| 20S proteasome beta-subunit [Streptomyces albus J1074]
gi|406690136|gb|EKC93961.1| proteasome endopeptidase complex, beta component [Streptomyces sp.
SM8]
Length = 281
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVASTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEHSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L VG D +G ++S
Sbjct: 112 FQLELEHFEKVEGAALSLEGKANRLSTMIRSNLGMAMQGLAVVPLFVGYDVDRERGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F SM L +E T ++ AL
Sbjct: 172 YDVTGGRSEEHGYAATGSGSTFARGSMKKLYRDDLTEEQATTLVVQAL 219
>gi|414886156|tpg|DAA62170.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 213
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 87 LSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSA 146
+S P A++LS LY +R FPYY +L G+D GKG V++YD VG E+ Y GT +
Sbjct: 79 MSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGS 138
Query: 147 KFML 150
++
Sbjct: 139 TLIM 142
>gi|162605862|ref|XP_001713446.1| 26S proteasome SU [Guillardia theta]
gi|13794378|gb|AAK39755.1|AF083031_112 26S proteasome SU [Guillardia theta]
Length = 200
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
GG V+AI G D IASD+ + S + KIF+L +GI G + D
Sbjct: 4 FGGCVVAILGKDSLCIASDSENGSVSYLTEFKTQKIFKLHEDIIIGIVGLLGDIYGFKEI 63
Query: 72 LQAEIN---RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+ EI+ + + K +P+ + ++S LLY++R PY +++L+ G GK + +
Sbjct: 64 LEYEISIVTKKEQKKMEPIEI---LSLISTLLYKKRFNPYLLEILVAGFTENGKPFLGTV 120
Query: 129 DPVGHCEKVA-YRLHGTSAKFMLASMSYLLSP 159
D +G ++ Y G + + + +L P
Sbjct: 121 DCIGAISYISNYACIGNLCENIFPLIQFLWRP 152
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M+E + G T + I ++AS++R++ I S KI+++ + + +G + D
Sbjct: 1 MVEAF--KGTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGD 58
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ +V +QAE +G+PL++ +LS +L RR FP+ VQ+++ G+D G
Sbjct: 59 AQALVRMIQAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDKMGP-K 117
Query: 125 VYSYDPVG 132
++S D +G
Sbjct: 118 IFSLDALG 125
>gi|408827590|ref|ZP_11212480.1| 20S proteasome subunit beta [Streptomyces somaliensis DSM 40738]
Length = 281
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 50 VPHGTTIVAAAFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMV 109
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKG 123
Q E+ + +G LSL G A LS ++ R +Q L V G D KG
Sbjct: 110 KLFQLELEHFEKVEGTQLSLEGKANRLSTMI--RGNLGMAMQGLAVVPLFAGWDVDREKG 167
Query: 124 GVYSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++SYD G E+ Y G+ + F SM L Y + +T+ ++ L
Sbjct: 168 RIFSYDVTGGRSEEQGYAATGSGSLFARGSMKKL---YREDLTERQAVTLVVQAL 219
>gi|448107066|ref|XP_004200900.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|448110074|ref|XP_004201531.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359382322|emb|CCE81159.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
gi|359383087|emb|CCE80394.1| Piso0_003510 [Millerozyma farinosa CBS 7064]
Length = 206
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + + +GG+ +A+ G D IASD R + +SNN KIF+ ++T +G++G D
Sbjct: 1 MSDPFSLNGGSAVAMVGKDCVAIASDLRLGNQSLGLSNNFEKIFQFGDKTFLGLTGLATD 60
Query: 65 --SLEVVSRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
+L V R + + + E + +P +L A ++S LYE+R PY+V L+ G+D
Sbjct: 61 VITLSEVFRFKHNLYKLREERDIEPKTL---ANLVSSTLYEKRFGPYFVSPLVAGLD 114
>gi|167538768|ref|XP_001751043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770452|gb|EDQ84148.1| predicted protein [Monosiga brevicollis MX1]
Length = 120
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 99 LLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
+LY +R FPYY +L G+D GKG VYSYDPVG E+ +R GT++ +
Sbjct: 1 MLYRKRFFPYYTNNILAGLDAEGKGCVYSYDPVGSYEREVFRAAGTASSLL 51
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 4/169 (2%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GTV+ I + +IA + R + +G ++S N K+ + +G +G + D+ ++ L+
Sbjct: 18 GTVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRALR 77
Query: 74 AEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
E G+ + + G A++LSL+LY ++ P +V++ G D G +Y DPVG
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFDEKGP-QIYVLDPVGS 136
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
+ Y G+ L + Y + D + +A+ + ++
Sbjct: 137 LIEDKYVALGSGGPIALGIIE---KEYREDIDVDEAEKLAVSAIREAIE 182
>gi|449525251|ref|XP_004169631.1| PREDICTED: proteasome subunit beta type-1-like, partial [Cucumis
sativus]
Length = 171
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 52 NQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ 111
++ + SG AD + L A + +S P A++LS LY +R FPYY
Sbjct: 2 DKAVLASSGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAF 61
Query: 112 VLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
+L G+D GKG V++YD VG E+V Y G+ + +
Sbjct: 62 NVLGGLDSEGKGCVFTYDAVGSYERVGYSAQGSGSTLI 99
>gi|392597640|gb|EIW86962.1| 20S proteasome subunit beta 3 [Coniophora puteana RWD-64-598 SS2]
Length = 208
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IASD R + +S+N K+F + ++ VG++G D + + R
Sbjct: 7 NGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKVFPVTDRIYVGLAGLGTDVITLRER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY--- 128
+ +N + + + A ++S LYE R PY+++ ++ G+ T GG+ +
Sbjct: 67 FRYRVNMYTIKEEREIEPETFAHLVSSTLYEHRFGPYFIEPVVAGLSKTPSGGLKPFIAA 126
Query: 129 -DPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
D +G C A + + GT++ + L P D + I+ L
Sbjct: 127 TDLIG-CINFAKDFVVSGTASSKLFGLAEGLWEPDLEPEDLFETISQTL 174
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + I D ++A++ R S G IVS K+FR+ + + +G AD + +
Sbjct: 9 GATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAAAGLFADMQSLSRII 68
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
AEI + + A++LS +LY ++ P+ +++ G D G +Y DPVG
Sbjct: 69 SAEIMYRELLSSSKMRVRAAAKLLSAILYSYKLMPFLSEIIFAGFDEEGY-HLYVLDPVG 127
Query: 133 HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
+ Y GT A + + ESE+ T I A E VK
Sbjct: 128 SIIEDDYAAIGTGASIAIGVI-------ESEYKNTLTIDQATELAIKSVK 170
>gi|315425045|dbj|BAJ46718.1| proteasome endopeptidase complex [Candidatus Caldiarchaeum
subterraneum]
Length = 187
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
T++ + D ++ASD R+S I S KI ++ + A+ ++G ++D++ +V+ ++A
Sbjct: 3 TIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVRA 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYE--RRIFPYYVQVLLVGIDGTG 121
E A +G PLS+ +++++S L Y R PYY ++++ G+D G
Sbjct: 63 ERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEG 111
>gi|440290998|gb|ELP84297.1| proteasome subunit beta type-3, putative [Entamoeba invadens IP1]
Length = 265
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GG + + G + +A+D R S+N K+F+L VG G AD V ++
Sbjct: 10 GGIAIGMCGKNCVALAADNRYGLRYQFASSNFHKVFQLNEHCLVGGCGVYADVQTVFEQI 69
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+ + N +G+P+ + LL+ +R PYY+ +++G D GK SYD +G
Sbjct: 70 KYDANLYKLREGRPIGPSQLVNATAHLLFSKRFNPYYMSPIIIGFDDNGKTYCSSYDYIG 129
>gi|324999221|ref|ZP_08120333.1| proteasome subunit beta [Pseudonocardia sp. P1]
Length = 298
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A+ +IA D R+++ I + K+F + +AVGI+G+ +LE+V
Sbjct: 65 VPHGTTIVALTFSGGVVIAGDRRATAGNVIAQRDIEKVFVTDHHSAVGIAGSAGIALEMV 124
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGIDGT----GK 122
++ + +G PLSL G A L+ ++ + + + V L G D T G+
Sbjct: 125 RLFGVDLEHYEKLEGVPLSLDGKANKLAGMIRQNLGAAMQGFVVVPLFAGFDPTVDDPGR 184
Query: 123 GG-VYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G + ++DP G + E + + G+ + F +S+ L Y+ D + A+E L
Sbjct: 185 AGRIVTFDPTGGRYDENLGFHAVGSGSVFAKSSLKKL---YDPAADLDGAVRTAIEAL 239
>gi|315426587|dbj|BAJ48216.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485345|dbj|BAJ50999.1| 20S proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 187
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
T++ + D ++ASD R+S I S KI ++ + A+ ++G ++D++ +V+ ++A
Sbjct: 3 TIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVRA 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYE--RRIFPYYVQVLLVGIDGTG 121
E A +G PLS+ +++++S L Y R PYY ++++ G+D G
Sbjct: 63 ERKLIALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEG 111
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 90/174 (51%), Gaps = 6/174 (3%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
VQ G T + I D ++A++ R S +S+ K+F + ++ A+ +G +AD +
Sbjct: 5 VQIGATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLA 64
Query: 70 SRLQAEI-NRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
L+ + + E + +P ++ A++LS++++ RR+ P+Y +VL+ G+D G +
Sbjct: 65 RILKLNVMSYELEVRKKP-TVRAMAKLLSIIMFSRRLLPFYAEVLVGGVDEEGP-HLIVM 122
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
DP+G + Y GT AK ++S L + Y + + +A++ + ++
Sbjct: 123 DPLGSLIEDNYAALGTGAKL---AVSLLDATYRPDISLQEAKKLAVQAIKAAIE 173
>gi|15790018|ref|NP_279842.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
gi|10580444|gb|AAG19322.1| proteasome, subunit alpha [Halobacterium sp. NRC-1]
Length = 255
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSN-NQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T++ + D L+ASD R+S G ++SN N K+ + A+ ISG++ + +
Sbjct: 60 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 119
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQV-LLVGIDGTGKGGVYSYDP 130
L+AE N +G+ +S+ + M S LL R P++ V +L G+D G G V+S DP
Sbjct: 120 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVDDDG-GHVFSLDP 175
Query: 131 VGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
G Y G+ M Y L E E Y++ +TMA E
Sbjct: 176 AGSSMSDTYTAQGS-------GMPYALGVLEQE--YSEDLTMADAE 212
>gi|429194518|ref|ZP_19186608.1| proteasome, beta subunit [Streptomyces ipomoeae 91-03]
gi|428669790|gb|EKX68723.1| proteasome, beta subunit [Streptomyces ipomoeae 91-03]
Length = 235
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 6 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 65
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A LS ++ R +Q L V G D KG +
Sbjct: 66 FQLELEHFEKVEGAQLSLEGKANRLSTMI--RSNLGMAMQGLAVVPLFAGYDVDREKGRI 123
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+SYD G E+ Y G+ + F +M L +E T ++ AL
Sbjct: 124 FSYDVTGGRSEEQGYAATGSGSIFARGAMKKLFREDLTEDQATTLVVQAL 173
>gi|387017848|gb|AFJ51042.1| Proteasome subunit beta type-2-like [Crotalus adamanteus]
Length = 201
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPDF L+A+DT ++S+ + + K+F++ + + G D+++ +Q
Sbjct: 4 LIGIQGPDFVLMAADTVAASSIVHMKRDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D +Y D +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADYLRSRSPYHVNLLLAGYDEHDGPALYYMDYLAS 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
KV + HG A L+ + P + + +V+ LEEL
Sbjct: 124 LAKVPFAAHGYGAFLTLSILDRYYKPGITREEAIEVLKKCLEEL 167
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + + D + A++TR++ + KIF++ + I+G ++D+ ++
Sbjct: 8 KGTTTVGLTCKDGVVFATETRATMGNLVAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKY 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++AE+ G+ +++ A + S +L+ R +P+YVQ LL G+D G +YS DP
Sbjct: 68 IRAEVALFRLRNGKRINVEAAATLTSNILHSSRGYPFYVQTLLGGVDDKGP-ALYSLDPT 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|451848501|gb|EMD61806.1| hypothetical protein COCSADRAFT_38618 [Cochliobolus sativus ND90Pr]
Length = 205
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQY-GDVFLGLTGLATDVSTVSDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT-GKGGVYSYDP 130
+ ++N + + +S A ++S LYERR PY++ ++ GI+ T GK + +D
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 127 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQAL 171
>gi|429964899|gb|ELA46897.1| hypothetical protein VCUG_01595 [Vavraia culicis 'floridensis']
Length = 205
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D A+I SD R +N VS +++++ ++ VG++ + D +V +
Sbjct: 8 YGGSVLALTGKDSAIIVSDKRLGNNSITVSMQHDRVYKMSDRVYVGMALFVPDIQMLVRK 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L E+N + + + +LS LY R P YV ++ GID + + S D +
Sbjct: 68 LSKEVNLFEIGENRRIEPDEFCSLLSSTLYSNRFSPSYVDPIVAGIDVQNRPYICSMDLL 127
Query: 132 GHCE 135
G C+
Sbjct: 128 G-CQ 130
>gi|126179146|ref|YP_001047111.1| proteasome endopeptidase complex [Methanoculleus marisnigri JR1]
gi|302595840|sp|A3CUS9.1|PSB_METMJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|125861940|gb|ABN57129.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanoculleus marisnigri
JR1]
Length = 214
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ G T + + ++A++ R++ I S KI+++ + + +G + D+ ++V
Sbjct: 8 IMKGTTTVGLIFDGGVVLATEMRATMGNMIASKRAKKIYQITPRIGLTTAGGVGDAQQLV 67
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
LQ E N +G+ +S+ + +LS L + R +PYYVQ+L+ G D G VYS D
Sbjct: 68 RILQVECNLFEMRRGKTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFDDEGP-SVYSVD 126
Query: 130 PVGHCEK 136
+G K
Sbjct: 127 AMGGATK 133
>gi|390346277|ref|XP_780413.3| PREDICTED: proteasome subunit beta type-3-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G V+A+ G D IASD R VS N KIF + + +G+SG D V +R
Sbjct: 7 NGSAVVAMIGKDCVGIASDRRFGVQAQTVSMNAQKIFTMGPRLYLGLSGLATDITTVSNR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N + + + M+S LLYERR PY+++ ++ G+D T K + + D
Sbjct: 67 LKFRLNLYTLRENRDVKPETFMSMVSNLLYERRFGPYFIEPVIAGLDPKTYKPFICNLDL 126
Query: 131 VG 132
+G
Sbjct: 127 IG 128
>gi|21220140|ref|NP_625919.1| 20S proteasome subunit beta [Streptomyces coelicolor A3(2)]
gi|289772643|ref|ZP_06532021.1| 20S proteasome beta-subunit [Streptomyces lividans TK24]
gi|81415865|sp|Q7AKQ5.1|PSB_STRCO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|3676748|gb|AAC64284.1| 20S proteasome beta-subunit precursor [Streptomyces coelicolor
A3(2)]
gi|6119686|emb|CAB59497.1| 20S proteasome beta-subunit precursor [Streptomyces coelicolor
A3(2)]
gi|289702842|gb|EFD70271.1| 20S proteasome beta-subunit [Streptomyces lividans TK24]
Length = 281
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D G+G ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRGRGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ + G+ + F +M L +E T ++ AL
Sbjct: 172 YDVTGGRSEERHFATTGSGSVFARGAMKKLFRDDLTEEQATTLVVQAL 219
>gi|328862302|gb|EGG11403.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 201
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 82/165 (49%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IA D R + V+ N K+F + ++ +G+ G +D++ + +
Sbjct: 4 NGGSVIAMVGKDCVAIACDLRLGNQALTVACNFEKVFPVTDKVYIGLPGLASDTVTLRQQ 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ +N + + + A ++S LY++R PY+V+ ++ G++ + + + D +
Sbjct: 64 FRHRVNMYKMKEERTIEPETMAHLVSSTLYQKRFGPYFVEPVIAGLNSKNEPFIAATDLI 123
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C A + + GT++ + L P D + I+ +L
Sbjct: 124 G-CINFAKDFVVSGTASDKLFGMAEALWEPNLEPEDLFETISQSL 167
>gi|393911865|gb|EFO27070.2| proteasome subunit beta type-3 [Loa loa]
Length = 205
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGT++A+AG D IASD R T ++ N K+ +L + +G+ G +D+ V+ ++
Sbjct: 8 GGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDAKTVLDKI 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPV 131
N + + + A M+S LLY+ R Y+ + L+ G+D T K + + D +
Sbjct: 68 TFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPYICAMDTI 127
Query: 132 G 132
G
Sbjct: 128 G 128
>gi|170583083|ref|XP_001896421.1| proteasome subunit beta type 3 [Brugia malayi]
gi|158596348|gb|EDP34705.1| proteasome subunit beta type 3, putative [Brugia malayi]
Length = 205
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GGT++A+AG D IASD R T ++ N K+ +L + +G+ G +D+ V+ ++
Sbjct: 8 GGTILAMAGNDCVCIASDLRLGEQMTTIATNMKKVHKLGEKVYIGLGGFHSDAKTVLDKI 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPV 131
N + + + A M+S LLY+ R Y+ + L+ G+D T K + + D +
Sbjct: 68 TFRKNLYELRENRKIKPEVAAVMVSNLLYQHRFGGYFTEPLIAGLDPTTNKPYICAMDTI 127
Query: 132 G 132
G
Sbjct: 128 G 128
>gi|367011527|ref|XP_003680264.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
gi|359747923|emb|CCE91053.1| hypothetical protein TDEL_0C01640 [Torulaspora delbrueckii]
Length = 205
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+AG D IASD R S VSN KIF +GI+G D +
Sbjct: 8 NGGIVVAMAGKDCVAIASDLRLGSQSLGVSNKFEKIFHY-GHVFLGITGLATDVTTLSET 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + +P+ +++S LYERR PY+V ++ GI+ T K + +D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTEKPFIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQAL 171
>gi|357402739|ref|YP_004914664.1| 20S proteasome subunit beta [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386358812|ref|YP_006057058.1| 20S proteasome subunit beta [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|337769148|emb|CCB77861.1| 20S proteasome beta-subunit [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365809320|gb|AEW97536.1| 20S proteasome beta-subunit [Streptomyces cattleya NRRL 8057 = DSM
46488]
Length = 281
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ HG T++A P A++A D R++ I + K+F +A+GI+G ++E+V
Sbjct: 50 IPHGTTIVAATFPGGAVLAGDRRATMGNVIAQRDIEKVFPADEFSAIGIAGTAGLAVEMV 109
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKG 123
Q E+ + +G LSL G A LS ++ R +Q L V G D GKG
Sbjct: 110 KLFQLELEHYEKIEGAVLSLEGKANRLSTMI--RGNLGMALQGLAVVPIFAGYDIDRGKG 167
Query: 124 GVYSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++SYD G E+ Y G+ + F ++ L Y + +TM ++ L
Sbjct: 168 RIFSYDVTGGRSEEHGYAATGSGSVFARGALKKL---YRDDLSEQQALTMVVQAL 219
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
T + + D ++AS+ R S G ++S K++++ N+ + +G D + +
Sbjct: 7 TAVGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKI-NKFLMAGAGIYGDLQTLTRIMNV 65
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHC 134
EI + G+P+S+ A++LS++LY+ ++ P+ ++L G+D G +Y DP+G
Sbjct: 66 EIKYYEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGP-QLYVLDPIGSL 124
Query: 135 EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
+ Y G+ A+ + + ESE+D + +A + +T +K
Sbjct: 125 IEDNYAAVGSGARIAIGVL-------ESEYDPNMSLDVATQLITKAIK 165
>gi|328875472|gb|EGG23836.1| proteasome subunit beta type 3 [Dictyostelium fasciculatum]
Length = 201
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 63/121 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+ + G + IA+D R VSNN K++R+ ++ +GISG + D+ + +
Sbjct: 4 NGGAVIVMTGKNCVAIATDLRFGIQHQTVSNNHPKVYRINDKCFIGISGLVTDAQTLYQK 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L N + + ++ + ++ +LYE+R PY+ + ++ G+D K + D +
Sbjct: 64 LVFRHNLYKLREERDMTPQVLSNLVGNMLYEKRFGPYFTEPVICGLDTQDKPFISGMDLI 123
Query: 132 G 132
G
Sbjct: 124 G 124
>gi|410911568|ref|XP_003969262.1| PREDICTED: proteasome subunit beta type-2-like [Takifugu rubripes]
Length = 199
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPDF L+A+D ++S+ + ++ K+F+L + + G D+++ +Q
Sbjct: 4 LIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D G+Y D +
Sbjct: 64 VQLYKMRNGYELSPSAAANFTRKNLSEYLRSRTPYHVNLLLAGYDDADGPGLYYMDYLAS 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + ++ M +EEL+
Sbjct: 124 LAKAPFAAHGYGAYLTLSILDRHYKPDLTREEAVALLKMCVEELS 168
>gi|407921624|gb|EKG14765.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSY-GDVYLGLTGLATDVSTVADL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + +S A ++S LYERR PY+V ++ GI+ TGK + +D
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFVSPVIAGINQTTGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + ++ AL
Sbjct: 127 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETVSQAL 171
>gi|329939090|ref|ZP_08288464.1| 20S proteasome subunit beta precursor [Streptomyces
griseoaurantiacus M045]
gi|329301975|gb|EGG45868.1| 20S proteasome subunit beta precursor [Streptomyces
griseoaurantiacus M045]
Length = 281
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D +G ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRDRGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L +E T ++ AL
Sbjct: 172 YDVTGGRSEETNYAATGSGSVFARGAMKKLFREDLTEEQATTLVVQAL 219
>gi|239986588|ref|ZP_04707252.1| putative 20S proteasome beta-subunit [Streptomyces roseosporus NRRL
11379]
Length = 258
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A + P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY---VQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ V L G D KG ++S
Sbjct: 89 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDIDRDKGRIFS 148
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ Y G+ + F SM L Y + +T+ ++ L
Sbjct: 149 YDVTGGRSEETGYAATGSGSIFARGSMKKL---YREDLTQEQALTLVVQAL 196
>gi|169235741|ref|YP_001688941.1| proteasome beta subunit [Halobacterium salinarum R1]
gi|302595858|sp|B0R4C8.1|PSB_HALS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595910|sp|Q9HR36.2|PSB_HALSA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|167726807|emb|CAP13593.1| proteasome beta subunit [Halobacterium salinarum R1]
Length = 243
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSN-NQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T++ + D L+ASD R+S G ++SN N K+ + A+ ISG++ + +
Sbjct: 48 GTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIRS 107
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQV-LLVGIDGTGKGGVYSYDP 130
L+AE N +G+ +S+ + M S LL R P++ V +L G+D G G V+S DP
Sbjct: 108 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVDDDG-GHVFSLDP 163
Query: 131 VGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
G Y G+ M Y L E E Y++ +TMA E
Sbjct: 164 AGSSMSDTYTAQGS-------GMPYALGVLEQE--YSEDLTMADAE 200
>gi|156539935|ref|XP_001599218.1| PREDICTED: proteasome subunit beta type-3-like isoform 1 [Nasonia
vitripennis]
Length = 205
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG ++A+ G + IA+D R +S N KI+ + +G+ G DS V+ R
Sbjct: 7 NGGAIIAMKGKNCVAIAADRRFGIQAQTISCNFQKIYEMGPHLYLGLPGLATDSQTVMER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L+ +N + + + M+S LLYERR PY+V+ ++ G+D
Sbjct: 67 LRFRLNLYELKESRTIHPKTFGSMISNLLYERRFGPYFVEPIVAGLD 113
>gi|455649612|gb|EMF28408.1| 20S proteasome subunit beta [Streptomyces gancidicus BKS 13-15]
Length = 281
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++++ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVSVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDREKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ + G+ + F +M L SE + T ++ AL
Sbjct: 172 YDVTGGRSEEQGFAATGSGSVFARGAMKKLFRDDLSEAEATTLVVQAL 219
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++A+D R+S ++S K+F++ + A+ +G++ D L +V
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRL 65
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE+ G+ +S+ A + S +L+ R PY+ L+ G D K +YS D
Sbjct: 66 LRAEVKLYRAKVGREISVKALATLTSNILHGSRFMPYFGWFLIAGYD--EKPALYSLDMA 123
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G + + G+ + A + Y+ + + + + +AL+ +
Sbjct: 124 GGVTEDKFTAAGSGMELAFAVLE---DGYKDDINVEEGVKLALKAI 166
>gi|50419453|ref|XP_458253.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
gi|49653919|emb|CAG86329.1| DEHA2C13222p [Debaryomyces hansenii CBS767]
Length = 206
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLEVV 69
+GG+ +A+ G D IA D R + +SNN KIF+L ++T +G++G D +L
Sbjct: 8 NGGSAVAMVGKDCIAIACDLRLGNQSLGLSNNFEKIFQLGDKTFLGLTGLATDVITLSET 67
Query: 70 SRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYS 127
R + + + E + +P +L A ++S LYE+R PY+V ++ G+D T K +
Sbjct: 68 FRFKNNLYKLREEREIEPTTL---ANLVSSTLYEKRFGPYFVGPIVAGLDSKTNKPFICG 124
Query: 128 YDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+D +G C A + + GT++ + L P D + I+ +L
Sbjct: 125 FDLIG-CIDFAKDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQSL 172
>gi|290993280|ref|XP_002679261.1| predicted protein [Naegleria gruberi]
gi|284092877|gb|EFC46517.1| predicted protein [Naegleria gruberi]
Length = 205
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G + IA+DTR V + KIF++ ++ +G++G D V +
Sbjct: 7 NGAGIVAMTGKNCVAIAADTRYGIRQQTVGTDMQKIFKIHDKLFIGLNGLATDVQTVNEK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
L+ +N + + + A ++S +LYE+R P++++ ++ G++G K + + D
Sbjct: 67 LKFRMNMYNLKEERDIKPSSFANLMSNILYEKRFGPWFIEPVIAGLEGPENKPFICAQDL 126
Query: 131 VGH-CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + GT ++ + L P D +VI+ L
Sbjct: 127 IGAPCFTDNFVVSGTCSEALYGMCESLYKPDMEPEDLFEVISQCL 171
>gi|154279074|ref|XP_001540350.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|150412293|gb|EDN07680.1| proteasome component PUP3 [Ajellomyces capsulatus NAm1]
gi|225562334|gb|EEH10613.1| proteasome component PUP3 [Ajellomyces capsulatus G186AR]
Length = 192
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF T +G++G D V L+ ++N
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDPVGHCEKV 137
+ + +S A ++S LYE+R PY+V +L GI+ TGK + +D +G C
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + + L P D + I+ AL
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQAL 158
>gi|255965748|gb|ACU45169.1| proteasome subunit beta type 1 [Prorocentrum minimum]
Length = 123
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 94 EMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFMLASM 153
++LS +LY +R FPYY +LVGID GKG VY YD +G E+V Y G+ + +++ +
Sbjct: 1 QLLSTMLYGKRFFPYYTFNVLVGIDDEGKGAVYHYDAIGSFERVPYTTSGSGSSLVMSVL 60
Query: 154 S 154
Sbjct: 61 D 61
>gi|291443528|ref|ZP_06582918.1| 20S proteasome beta-subunit [Streptomyces roseosporus NRRL 15998]
gi|291346475|gb|EFE73379.1| 20S proteasome beta-subunit [Streptomyces roseosporus NRRL 15998]
Length = 281
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A + P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY---VQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDIDRDKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ Y G+ + F SM L Y + +T+ ++ L
Sbjct: 172 YDVTGGRSEETGYAATGSGSIFARGSMKKL---YREDLTQEQALTLVVQAL 219
>gi|212537587|ref|XP_002148949.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
gi|210068691|gb|EEA22782.1| proteasome component Pup3, putative [Talaromyces marneffei ATCC
18224]
Length = 192
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF T +GI+G D V + ++N
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPSTYLGITGLATDVTTVSDLFRYKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPVGHCEKV 137
+ + +S A ++S LYERR PY+V ++ GI+ TGK + +D +G C
Sbjct: 61 YRLREERHISPQTLANLVSSSLYERRFGPYFVSPVIAGINHTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + + L P D + I+ AL
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQAL 158
>gi|50556674|ref|XP_505745.1| YALI0F22341p [Yarrowia lipolytica]
gi|49651615|emb|CAG78556.1| YALI0F22341p [Yarrowia lipolytica CLIB122]
Length = 206
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLEVV 69
+GG+ +A+ G D IA D R S G VSN+ K+F + +G++G D +L V
Sbjct: 8 NGGSCVAMVGKDCVAIACDLRMGSQGLGVSNDFEKVFNYGDNVYLGLTGLATDVQTLHEV 67
Query: 70 SRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYS 127
R + + + AE + +P + A ++S LYE+R PY+V ++ GI+ T K +
Sbjct: 68 FREKTNLYKMAEERQIEPETF---ANLVSSTLYEKRFGPYFVGPIVAGINSKTEKPFICG 124
Query: 128 YDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+D +G C A + + GT++ + L P D + + AL
Sbjct: 125 FDLIG-CIDFAKDFIVSGTASDMLYGMCESLWQPDLEPEDLFNTCSQAL 172
>gi|443717932|gb|ELU08769.1| hypothetical protein CAPTEDRAFT_228896 [Capitella teleta]
Length = 205
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+AG D IA+D R G V+ + KI+ +G+ G D V R
Sbjct: 7 NGSAIVAMAGKDCVAIAADRRFGIQGQTVALDFQKIYEYGPNLYMGLPGLATDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N + + + ++S LLYERR PY+V+ ++ G+D T K + S D
Sbjct: 67 LKFRVNMYELRENRKMKPQTMLSVVSNLLYERRFGPYFVEPVIAGLDPKTSKPFIASLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C + + ++GT A+ + L P
Sbjct: 127 IG-CPMITEDFVINGTCAEQLYGMCEALWEP 156
>gi|344998686|ref|YP_004801540.1| 20S proteasome subunits A and B [Streptomyces sp. SirexAA-E]
gi|344314312|gb|AEN09000.1| 20S proteasome A and B subunits [Streptomyces sp. SirexAA-E]
Length = 258
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAATFPGGVVLAGDRRATMGNMIAQRDMQKVFPADEYSAVGIAGTAGLAIEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A LS ++ R +Q L V G D KG +
Sbjct: 89 FQLELEHFEKVEGTTLSLEGKANRLSTMI--RGNLSMAMQGLAVVPLFAGFDVDREKGRI 146
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+SYD G E+ Y G+ + F SM L Y + +T+ ++ L
Sbjct: 147 FSYDVTGGRSEEQGYAATGSGSLFARGSMKKL---YRDDLTEEQALTLVVQAL 196
>gi|414886162|tpg|DAA62176.1| TPA: hypothetical protein ZEAMMB73_205941 [Zea mays]
Length = 135
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 87 LSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSA 146
+S P A++LS LY +R FPYY +L G+D GKG V++YD VG E+ Y GT +
Sbjct: 1 MSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDAVGSYERTGYSAQGTGS 60
Query: 147 KFML 150
++
Sbjct: 61 TLIM 64
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++A+D R+S + + N KI ++ A+ +G++ D L +V
Sbjct: 6 KGTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAGAGDVGDILNLVRL 65
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE G+ +S A +L+ +L + FPY L+ G D K +YS D V
Sbjct: 66 LRAEAKLYYAQFGREMSARALATLLANILNGYKYFPYMAWFLVGGYD--EKARLYSVDAV 123
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + Y G+ +F + S L + Y + + + +A++ + +K
Sbjct: 124 GGITEDKYMAAGSGMEF---AYSILDAEYSDDITVKEGVKLAVKAINTAIK 171
>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
Marburg]
gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 210
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + G T + I D + A++ R+S I KIF++ A I+G++AD
Sbjct: 1 MKDEKTLKGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVAD 60
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ ++ L+AE + +S+ A + + +L+ R +P+ VQ LL G+D TG
Sbjct: 61 AQSLMKYLKAEAALYRMRNSERISIEAAAALAANILHSSRFYPFIVQTLLGGVDETG-AK 119
Query: 125 VYSYDPVG 132
+YS DP G
Sbjct: 120 IYSLDPSG 127
>gi|50290063|ref|XP_447463.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526773|emb|CAG60400.1| unnamed protein product [Candida glabrata]
Length = 205
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+AG D IA D R + VSNN K+F GI+G D +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGNQSLGVSNNFEKVFNY-GHVFFGITGLATDVTTLNEL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + +P+ +++S LYERR PY+V ++ GI+ +GK + +D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQAL 171
>gi|320101454|ref|YP_004177046.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753806|gb|ADV65564.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 209
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT + + + ++A++ R S +G ++S N KI + + VG +G M D +V L+
Sbjct: 8 GTAIGLKTSEGVVLAAEKRLSYDGFVLSRNARKIHMVTDHVGVGFAGLMGDVGFLVKVLR 67
Query: 74 AEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
E G+ + A++LSL+LY ++ P +V++ G D G +Y DPVG
Sbjct: 68 LEAKNYELQHGREIRARSMAKLLSLILYNYKLAPMLTEVVVGGFDDEGP-SLYILDPVGS 126
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSP 159
+ Y G+ A+ L + SP
Sbjct: 127 LIEEKYVAVGSGAQLALGYIEPRYSP 152
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V G T + + D ++A+D R+S + K++++ + A+ I+G++ D+ +V
Sbjct: 3 VMKGTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIV 62
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
L AE G+ +S A +LS +L+ R FP+ Q+++ G D ++S D
Sbjct: 63 RLLTAEAKLYKMRTGKNISPLACATLLSNILHSNRYFPFLTQLIIGGYDLLEGAKLFSLD 122
Query: 130 PVG 132
P+G
Sbjct: 123 PLG 125
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
++ V G T + + D ++A++ R++ I S KI+++ ++ A+ +G++ D+
Sbjct: 4 MQDMVFKGTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVADRVAMTTAGSVGDA 63
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+ ++ E + K + ++ A MLS LL R FPY+VQ+L+ G+D G +
Sbjct: 64 QFLARLVKVEASLYETRKEEKPTVKAIATMLSNLLNSSRYFPYFVQLLIGGVDKRGP-SM 122
Query: 126 YSYDPVG 132
+S DP+G
Sbjct: 123 FSIDPIG 129
>gi|83314992|ref|XP_730601.1| proteasome subunit beta type 1 [Plasmodium yoelii yoelii 17XNL]
gi|23490372|gb|EAA22166.1| proteasome subunit beta type 1-related [Plasmodium yoelii yoelii]
Length = 214
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 46 KIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRI 105
KI ++ ++ +G SG +D + S LQ +I S+ A++L + LY RR
Sbjct: 44 KISKITDKCIIGSSGMQSDIKTLHSLLQKKIQLFYLEHSHYPSIHVIAKLLCVTLYSRRF 103
Query: 106 FPYYVQVLLVGIDGTGKGGVYSYDPVG 132
FPYY +L GID GKG +YSYD +G
Sbjct: 104 FPYYTFNILAGIDEDGKGVLYSYDAIG 130
>gi|451992642|gb|EMD85122.1| hypothetical protein COCHEDRAFT_1149474 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
GG +A+ G D IA D R VSNN KIF+ +G++G D V
Sbjct: 8 DGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQY-GDVFLGLTGLATDVSTVSDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT-GKGGVYSYDP 130
+ ++N + + +S A ++S LYERR PY++ ++ GI+ T GK + +D
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYERRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 127 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQAL 171
>gi|441516388|ref|ZP_20998138.1| 20S proteasome beta-type subunit [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441456974|dbj|GAC56099.1| 20S proteasome beta-type subunit [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 284
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 18/179 (10%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+A P ++A D RS+ I + + K+F +A GI+G + E+V
Sbjct: 47 HGTTIVAVAYPGGVVLAGDRRSTMGHVIATRDVQKVFVTDQTSAAGIAGTAGVAFELVKL 106
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ-----VLLVGIDG------T 120
E+ + +G PL+L G L+ ++ R +Q L VG DG
Sbjct: 107 FTVELEHYEKIEGVPLTLDGKVTRLASMV--RGNLGAALQGLTALPLFVGYDGANQTGEA 164
Query: 121 GKGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G G ++S+D G H E+ Y G+ A + +S+ L Y E + +A+E L
Sbjct: 165 GAGRIFSFDVAGARHEERAGYDAIGSGAVYAKSSLKKL---YHPEVTGDQALALAVEAL 220
>gi|347826593|emb|CCD42290.1| similar to proteasome subunit beta type-3 [Botryotinia fuckeliana]
Length = 212
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFSYGPSVYLGLTGLATDVSTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + +S A ++S LYERR P++V ++ G+D TGK + +D
Sbjct: 68 FRYKVNMYRLREERNISPTTMANLVSSSLYERRFGPFFVSPVVAGLDQKTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT++ + + L P
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEP 157
>gi|223646934|gb|ACN10225.1| Proteasome subunit beta type-2 [Salmo salar]
gi|223672797|gb|ACN12580.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 208
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++++ + +Q K+F+L ++ + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNIAANSIIQMKQDQDKMFKLSDKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 IQLYKMRNGYELSPKAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + ++ +EEL
Sbjct: 124 LAKAPFAAHGYGAYLTLSILDRYYRPDLTRDEAVGLLKKCVEELN 168
>gi|453051981|gb|EME99474.1| 20S proteasome subunit beta [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 281
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAATFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D GKG ++S
Sbjct: 112 FQLELEHFEKVEGTQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGWDVDRGKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ Y G+ + F S+ L Y + T+ ++ L
Sbjct: 172 YDVTGGRSEEYGYAATGSGSLFARGSLKKL---YRDDLSAEQAATLVVQAL 219
>gi|209737686|gb|ACI69712.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 208
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++++ + +Q K+F+L ++ + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNIAANSIIQMKQDQDKMFKLSDKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 IQLYKMRNGYELSPKAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + ++ +EEL
Sbjct: 124 LAKAPFAAHGYGAYLTLSILDRYYRPDLTRDEAVGLLKKCVEELN 168
>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 201
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G TV+ I+ + ++A++ R S +V+ N K F + + +G +AD +V ++
Sbjct: 8 GATVVGISYNNGVILAAEKRVSFGNFVVNKNIKKTFSVTDHVGAACAGMVADMQVLVRQV 67
Query: 73 QAEIN-RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+A R E + + ++ A+++S++++ERR FP QV++ GI+ K +Y+ DP+
Sbjct: 68 EALAKIRKLETR-RDVAPNSIAKLMSVIMFERRYFPLLTQVIVGGIN--TKPEIYTLDPL 124
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESE 163
G Y GT A+ L M P +E
Sbjct: 125 GSVLPDDYAAVGTGAEMALGIMDAEFKPNMTE 156
>gi|270008657|gb|EFA05105.1| hypothetical protein TcasGA2_TC015205 [Tribolium castaneum]
Length = 205
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG ++A+ G IASD R ++ N KIF + VG+ G D+ V+ +
Sbjct: 7 NGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDTQTVMEK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ N + +P+S + MLS +LYE R P++V+ ++ G+D GT + + + D
Sbjct: 67 LRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPYICNMDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT++ + L P D + + AL
Sbjct: 127 IG-CPNQPNDFVVGGTASSQLFGMCESLWEPNLGPDDLFETTSQAL 171
>gi|389626557|ref|XP_003710932.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
gi|351650461|gb|EHA58320.1| proteasome component PUP3 [Magnaporthe oryzae 70-15]
Length = 206
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF + +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFSYSSSVFLGLTGLATDVATVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR PY+V ++ G++ TG + +D
Sbjct: 68 FRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLEPKTGAPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT+++ + L P D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASEQLFGMCESLWEPDLGPEDLFETISQAL 172
>gi|357414371|ref|YP_004926107.1| 20S proteasome subunits A/B [Streptomyces flavogriseus ATCC 33331]
gi|320011740|gb|ADW06590.1| 20S proteasome A and B subunits [Streptomyces flavogriseus ATCC
33331]
Length = 281
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A + P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY---VQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGATLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGFDVDREKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ Y G+ + F SM L Y ++ +T+ ++ L
Sbjct: 172 YDVTGGRSEEHGYAATGSGSVFARGSMKKL---YRADLTEEQTLTLVVQAL 219
>gi|213409155|ref|XP_002175348.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
gi|212003395|gb|EEB09055.1| 20S proteasome component beta 3 [Schizosaccharomyces japonicus
yFS275]
Length = 204
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+ +A+ G + IASD R + ++NN KIF + +T +G++G D +
Sbjct: 7 NGGSCIAMVGKECVAIASDLRLGAQSVSLTNNFPKIFSMTEKTYLGLTGLATDVQTLHEL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ +IN + + + A ++S LYE+R PY+ ++ G+ T + + +D +
Sbjct: 67 FRYKINMYKLREERQIEPKTFANLVSSTLYEKRFAPYFTFPIVAGLSKTNEPFICGFDSI 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C A + + GT++ + L P D + I+ AL
Sbjct: 127 G-CIDFAKDFAVSGTASDHLYGICEDLYEPDLEPEDLFETISQAL 170
>gi|255731824|ref|XP_002550836.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
gi|240131845|gb|EER31404.1| proteasome component PUP3 [Candida tropicalis MYA-3404]
Length = 206
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + + +GG +A+ G + IASD R VSNN KIF + +T +G++G +D
Sbjct: 1 MSDPFSINGGAAVAMIGKECIAIASDLRLGQQSLGVSNNFEKIFEISPKTYLGLTGLASD 60
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKG 123
L + + + N + + A ++S LYERR P++V ++ G+D T K
Sbjct: 61 VLTLKELFRFKTNLYKLREDHSIEPSTLANLISSSLYERRFGPWFVSPIVAGLDSKTNKP 120
Query: 124 GVYSYDPVG 132
+ +D +G
Sbjct: 121 FICGFDSIG 129
>gi|126138200|ref|XP_001385623.1| hypothetical protein PICST_62487 [Scheffersomyces stipitis CBS
6054]
gi|126092901|gb|ABN67594.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 206
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 10/169 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLEVV 69
+GG+ +A+ G D IA D R + ++NN KIF+ ++T +G++G +D +L V
Sbjct: 8 NGGSAVAMVGKDCIAIACDLRLGNQSLGLANNFEKIFQFGDKTFLGLTGLASDVTTLSEV 67
Query: 70 SRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYS 127
R + + + E + +P +L A ++S LYE+R PY++ ++ G+D T K +
Sbjct: 68 FRFKNNLYKLREERQIEPKTL---ANLVSSTLYEKRFGPYFIGPIVAGLDSKTSKPFICG 124
Query: 128 YDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+D +G C A + + GT+ + L P D + I+ AL
Sbjct: 125 FDLIG-CIDFAKDFIVSGTATDQLYGMCESLYEPNLEPEDLFETISQAL 172
>gi|411001319|ref|ZP_11377648.1| 20S proteasome subunit beta [Streptomyces globisporus C-1027]
Length = 281
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A + P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAASFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY---VQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDIDREKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ Y G+ + F SM L Y + +T+ ++ L
Sbjct: 172 YDVTGGRSEETGYAATGSGSIFARGSMKKL---YREDLTQEQALTLVVQAL 219
>gi|294811696|ref|ZP_06770339.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
gi|326440120|ref|ZP_08214854.1| proteasome subunit beta [Streptomyces clavuligerus ATCC 27064]
gi|294324295|gb|EFG05938.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
Length = 258
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAATYPGGVVLAGDRRATMGNMIAQRDMEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A LS ++ R +Q L V G D KG +
Sbjct: 89 FQLELEHFEKVEGTQLSLEGKANRLSAMI--RGNLGMAMQGLAVVPLFAGYDVDREKGRI 146
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+SYD G E+ + G+ + F S+ L P +E T ++ AL
Sbjct: 147 FSYDVTGGRSEEQGFAATGSGSVFARGSLKKLYRPDLTEEQATTLVVQAL 196
>gi|198423327|ref|XP_002125759.1| PREDICTED: similar to LOC496005 protein [Ciona intestinalis]
Length = 205
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IASD R V + KIF + + +G++G D V R
Sbjct: 7 NGGAVVAMKGKNCVAIASDLRFGIQAQTVGMDFEKIFPMSERLYIGLTGLATDVQTVSQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
LQ ++ + + +S ++S LLYE+R PY+++ ++ G+D T + + S D
Sbjct: 67 LQFQLKLYELRENRQISPKTFLSVVSNLLYEKRFGPYFIEPVIAGLDPKTKEPFIASCDL 126
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C E + + GT A M L P D + ++ AL
Sbjct: 127 IG-CPMEPEDFVVTGTCAIQMYGMCEALWRPDMEPDDLFECVSQAL 171
>gi|363421203|ref|ZP_09309292.1| 20S proteasome beta-type subunit [Rhodococcus pyridinivorans AK37]
gi|359734938|gb|EHK83906.1| 20S proteasome beta-type subunit [Rhodococcus pyridinivorans AK37]
Length = 284
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ LIA D R++ I S + K+F N +A GI+G ++E+V
Sbjct: 56 HGTTIVALTFDGGVLIAGDRRATMGNLIASRDVDKVFITDNYSAAGIAGTAGLAIELVRL 115
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G PL+ G A LS ++ + P V L D G
Sbjct: 116 FAVELEHYEKIEGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGFDLDASDAHRAG 175
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ SYD VG + E+ Y G+ + F +S+ L Y ++ D + A+E L
Sbjct: 176 RIVSYDVVGGRYEERAGYHAVGSGSLFARSSLKKL---YRADADEQSALRSAVEAL 228
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
++ G T + I D+ ++ +D+R++ I + N K++++ N A+ I+G + D+ +V
Sbjct: 4 LKTGTTTVGITAGDYVIMGTDSRATMENFISNKNAQKLYQIDNYAAMTIAGLVGDAQVLV 63
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
++AE+ + + + A +LS +L + + +PY VQ+L+ G D K ++S D
Sbjct: 64 RYMKAEMELYRVQRKVSMPIDAAATLLSNMLNQTKFYPYMVQLLVGGYD--TKPHIFSID 121
Query: 130 PVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
G + Y G+ + F+ + + Y+ D I + ++ ++
Sbjct: 122 AAGGSVEDIYASTGSGSPFVYGVLE---AEYQKNMSLDDGINLVIKAIS 167
>gi|344249174|gb|EGW05278.1| Proteasome subunit beta type-3 [Cricetulus griseus]
Length = 194
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 17 MAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEI 76
MA+ G + IA+D R +V+ + KIF + ++ +G++G D V RL+ +
Sbjct: 1 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRL 60
Query: 77 NRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPVGHCE 135
N +G+ + M++ LLYE+R PYY + ++ G+D T K + S D +G C
Sbjct: 61 NLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLDLIG-CP 119
Query: 136 KVA--YRLHGTSAKFMLASMSYLLSP 159
V + + GT ++ M L P
Sbjct: 120 MVTDDFVVSGTCSEQMYGMCESLWEP 145
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 5/165 (3%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + I D ++A++ R S G I+S K+F++ ++ + +G AD + L
Sbjct: 5 GATAVGIKVKDGVVLAAERRMSYGGFIMSKAARKVFKVGDRMGMACAGLYADMQAIARAL 64
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+ EI + + + + A +L L+LY ++FP + + G D + ++ DPVG
Sbjct: 65 ENEIRYYEISNKRKMKVRSAARLLGLILYSNKLFPLMTETVFGGYDDEPR--IFVLDPVG 122
Query: 133 HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ Y GT A +M+ L Y + + +A+E +
Sbjct: 123 SVIEEKYSAVGTGAPL---AMALLDKEYREDMSLEEAQNLAIESV 164
>gi|91084563|ref|XP_973600.1| PREDICTED: similar to proteasome beta 3 subunit [Tribolium
castaneum]
Length = 210
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG ++A+ G IASD R ++ N KIF + VG+ G D+ V+ +
Sbjct: 12 NGGAMVAMKGDKCVSIASDKRFGIQAQTIATNFQKIFEMGPHLYVGLPGLATDTQTVMEK 71
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ N + +P+S + MLS +LYE R P++V+ ++ G+D GT + + + D
Sbjct: 72 LRFRKNLYELKENRPMSPKVFSAMLSNMLYENRFGPFFVEPIVAGLDPGTYEPYICNMDL 131
Query: 131 VGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT++ + L P D + + AL
Sbjct: 132 IG-CPNQPNDFVVGGTASSQLFGMCESLWEPNLGPDDLFETTSQAL 176
>gi|410866299|ref|YP_006980910.1| 20S proteasome beta-type subunit [Propionibacterium acidipropionici
ATCC 4875]
gi|410822940|gb|AFV89555.1| 20S proteasome beta-type subunit [Propionibacterium acidipropionici
ATCC 4875]
Length = 271
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 3 EAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
+A L ++HG T++A+ ++A D R++ I + K+F + + +G++G
Sbjct: 39 DATLPELLRHGTTIVAMKYSSGVVVAGDRRATMGTVIAQRDIEKVFGADDTSVIGVAGAA 98
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGIDG 119
++E+V Q E+ + +G+PLSL G A L+ L+ + V + G D
Sbjct: 99 GLAVEMVRLFQTELEHYEKIEGRPLSLDGRAARLATLVRSNIGMAVQGIAVTPIFAGWDV 158
Query: 120 TGKGG-VYSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G ++SYD G E+ AY G+ A F AS+ L + + D + + +A+ +
Sbjct: 159 VRHSGRIFSYDGTGGRYEEHAYCATGSGAIFAKASLKKL---HRIDMDRQEAVRVAVRSI 215
>gi|171696000|ref|XP_001912924.1| hypothetical protein [Podospora anserina S mat+]
gi|170948242|emb|CAP60406.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
GG +A+ G D IA D R VSNN KIF+ + +G++G D V
Sbjct: 5 DGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDNVFLGLTGLATDVATVSDL 64
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR P++V ++ G+D TG+ + +D
Sbjct: 65 FRYKVNMYRLREERQIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGQPFICGFDS 124
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT+ + + L P
Sbjct: 125 IG-CIDFAKDFIVSGTATEQLFGMCESLWEP 154
>gi|327289111|ref|XP_003229268.1| PREDICTED: proteasome subunit beta type-2-like [Anolis
carolinensis]
Length = 201
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPDF L+A+DT ++S+ + + K+F++ + + G D+++ +Q
Sbjct: 4 LLGIQGPDFVLVAADTVAASSIVHMKRDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D +Y D +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHDGPTLYYMDYLAS 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K + HG A L+ + P + + +V+ LEEL
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYKPGITREEAIEVLKKCLEEL 167
>gi|254392855|ref|ZP_05008025.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
gi|197706512|gb|EDY52324.1| 20S proteasome beta-subunit [Streptomyces clavuligerus ATCC 27064]
Length = 281
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAATYPGGVVLAGDRRATMGNMIAQRDMEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A LS ++ R +Q L V G D KG +
Sbjct: 112 FQLELEHFEKVEGTQLSLEGKANRLSAMI--RGNLGMAMQGLAVVPLFAGYDVDREKGRI 169
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+SYD G E+ + G+ + F S+ L P +E T ++ AL
Sbjct: 170 FSYDVTGGRSEEQGFAATGSGSVFARGSLKKLYRPDLTEEQATTLVVQAL 219
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ G T + + D ++A++ R++ I S KI+++ + + +G + D+ ++V
Sbjct: 8 IMKGTTTVGLIFKDGVVLATEMRATMGNLIASKRAKKIYKITPRIGMTTAGGVGDAQQLV 67
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
+Q E + +G+ +S+ + +LS L + R +PYYVQ+L+ G D G VYS D
Sbjct: 68 RIIQVECSLYEMRRGRTMSVGAASTLLSNYLNQNRYYPYYVQLLMGGFD-EGGPSVYSVD 126
Query: 130 PVGHCEK 136
+G +
Sbjct: 127 AMGGATR 133
>gi|325179973|emb|CCA14375.1| proteasome subunit beta type3 putative [Albugo laibachii Nc14]
Length = 204
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+AG D IA DTR +S N K+FR+ ++ +G++G D V
Sbjct: 7 NGSAIIAMAGKDCVGIACDTRLGLQAQTISTNFQKVFRVSDKIFLGLAGLATDVQTVSQL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ ++N + + L + LS ++Y++R P++++ ++ G+ + + S D +
Sbjct: 67 LKFKVNMYKMNEERDLKPETLSSYLSAMMYKKRFGPWFIEPVIAGLTADNQPFLSSMDCL 126
Query: 132 GHCE 135
G CE
Sbjct: 127 G-CE 129
>gi|395331331|gb|EJF63712.1| N-terminal nucleophile aminohydrolase [Dichomitus squalens LYAD-421
SS1]
Length = 208
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IASD R + +S+N KIF + N+ +G+ G D +
Sbjct: 7 NGGSVIAMVGKDCVAIASDLRLGNQALGISSNFQKIFPMTNRIFLGLPGLATDVTTLKET 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
+ +N + + + A ++S LYERR P++++ ++ G+ T G SY P
Sbjct: 67 FRYRVNMFTIKEEREIEPETFAHLVSSTLYERRFGPWFIEPVMAGLQKTHDG---SYKP 122
>gi|409083718|gb|EKM84075.1| hypothetical protein AGABI1DRAFT_110664 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201222|gb|EKV51145.1| 20S proteasome subunit beta 3 [Agaricus bisporus var. bisporus H97]
Length = 208
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+AG D IASD R + +S+N ++F + ++ +G+ G D + R
Sbjct: 7 NGGSVIAMAGKDCVAIASDLRLGNQMLSISSNFQRVFPVTDRIYIGLPGLATDVTTLRER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY--- 128
+ +N + + + ++S LYE R PY++ ++ GI T GG+ +
Sbjct: 67 FRLRVNMYTIKEEREIEPEAFTHLVSSTLYEHRFGPYFISPVVAGISKTPTGGIKPFIAA 126
Query: 129 -DPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
D +G C A + + GT++ + L P D + I+ L
Sbjct: 127 TDLIG-CINFAKDFVVSGTASSKLFGVAEGLWEPDLGPEDLFETISQTL 174
>gi|189205423|ref|XP_001939046.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975139|gb|EDU41765.1| proteasome subunit beta type-3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 205
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQY-GDVFLGLTGLATDVSTVSDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT-GKGGVYSYDP 130
+ ++N + + +S A ++S LYE+R PY++ ++ GI+ T GK + +D
Sbjct: 67 FRYKVNMYRLREERNISPQTMANLVSSSLYEKRFGPYFISPVIAGINQTSGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 127 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQAL 171
>gi|68488966|ref|XP_711676.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|77023006|ref|XP_888947.1| hypothetical protein CaO19_1336 [Candida albicans SC5314]
gi|46432996|gb|EAK92454.1| hypothetical protein CaO19.1336 [Candida albicans SC5314]
gi|76573760|dbj|BAE44844.1| hypothetical protein [Candida albicans]
gi|238883475|gb|EEQ47113.1| proteasome component PUP3 [Candida albicans WO-1]
Length = 206
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + + +GG +A+ G D IASD R VSNN KIF + ++T +G++G D
Sbjct: 1 MSDPFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATD 60
Query: 65 --SLEVVSRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT- 120
SL+ + R + + + E + +P +L A ++S LYERR P++V ++ G+
Sbjct: 61 VISLKELFRFKTNLYKLREERNIEPSTL---ANLVSSSLYERRFGPWFVSPIVAGLSSKD 117
Query: 121 GKGGVYSYDPVGHCEKVAYRL--HGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
K + +D +G C ++ GT++ + L P D + I+ AL
Sbjct: 118 NKPFICGFDSIG-CIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQAL 172
>gi|452837699|gb|EME39641.1| hypothetical protein DOTSEDRAFT_75329 [Dothistroma septosporum
NZE10]
Length = 206
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN K+F +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKVFNYGPSLYLGLTGLATDVSSVSEL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR P+++ ++ GI+ TGK + +D
Sbjct: 68 FRYKVNMYRLREERDIAPQTFANLVSSSLYERRFGPWFISPVVAGINHTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTASDQLFGTCEGLWEPDLGPEDLFETISQAL 172
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D + AS+ R+S + KIF++ N A I+G++AD+ ++
Sbjct: 8 EGTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKIDNHIAATIAGSVADAQTLMKV 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ AE + G+ +SL A + S +L+ P YVQ L+ G+D TG +YS D
Sbjct: 68 ISAETSLYRLRNGKDISLEAAAAVSSNILHSS---PAYVQTLIGGVDDTG-ASIYSLDAA 123
Query: 132 GHCEKVAYRLHGTSAKF 148
G K + G+ + F
Sbjct: 124 GGMIKDTFISTGSGSTF 140
>gi|335345796|gb|AEH41478.1| proteasome component Pup3 [Endocarpon pusillum]
Length = 206
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G IA D R VSNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMVGKGCVAIACDLRLGLQSLTVSNNFPKIFQYAPSCYLGLTGLATDVSTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ +N + + +S A ++S LYERR PY+V +L GI+ TGK + +D
Sbjct: 68 FRYRVNMYRLREERNISPQTLANLVSSSLYERRFGPYFVSPVLAGINHTTGKPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT++ + + L P
Sbjct: 128 IG-CIDFAKDFIVGGTASDQLFGTCEGLWEP 157
>gi|403214964|emb|CCK69464.1| hypothetical protein KNAG_0C03600 [Kazachstania naganishii CBS
8797]
Length = 205
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+AG D IA D R S VSNN KIF +G++G D L +
Sbjct: 8 NGGICVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFHY-GHVFMGMTGLATDVLTLSDV 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + + + +++S LYERR PY+V ++ GI+ TGK + +D
Sbjct: 67 FRYKTNLYKLREDRMIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKTGKPFIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEADDLFETISQAL 171
>gi|328864212|gb|AEB53189.1| proteasome subunit beta type 3 [Holothuria glaberrima]
Length = 202
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G D IASD R VS KIF + + +G+SG D V +R
Sbjct: 4 NGSAIVAMRGKDCVAIASDRRFGIQAQTVSMECQKIFEMAPRLYIGLSGLATDVQTVSNR 63
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N + + + M++ LLYERR PY+ + ++ G+D T + + + D
Sbjct: 64 LKFRLNLYTLRENRDIKPKTFMSMVANLLYERRFGPYFTEPVIAGLDPKTFEPFICNLDL 123
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT + + L P D + I+ AL
Sbjct: 124 IG-CPMITEDFVVAGTCTEQLYGMCESLWKPDLEPDDLFETISQAL 168
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLE 67
VQ G T + I D ++A++ R S +S+ K+F + ++ A+ +G +AD +L
Sbjct: 5 VQIGATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLA 64
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ +L A+ E K +P S A +LS++++ RR P++ +VL+ GID G +
Sbjct: 65 KILKLNAK-AYELEMKRKP-STHSMARLLSVIMFSRRFMPFFAEVLVGGIDEEGP-HLIV 121
Query: 128 YDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
DP+G + Y GT AK +A + + Y + + +A++ L ++
Sbjct: 122 MDPLGSLIEDNYAALGTGAKLAVAVLD---TGYRPDITVEEAKKLAVQALKAAIE 173
>gi|218884589|ref|YP_002428971.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390939081|ref|YP_006402819.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
fermentans DSM 16532]
gi|302595704|sp|B8D673.1|PSB1_DESK1 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|218766205|gb|ACL11604.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|390192188|gb|AFL67244.1| proteasome endopeptidase complex, beta subunit [Desulfurococcus
fermentans DSM 16532]
Length = 202
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT + + + ++AS+ R + +G ++S N KI + N VG +G M D +V L+
Sbjct: 8 GTAIGLKTSEGVVLASEKRLTYDGFVLSRNARKIHMITNHIGVGFAGLMGDVNFLVKVLR 67
Query: 74 AEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
E G+ + A++LS++LY ++ P +V++ G D G +Y DPVG
Sbjct: 68 LEAKNYELQHGREIKTRSLAKLLSVILYSYKLAPMLTEVVVGGYDEEGP-SLYILDPVGS 126
Query: 134 CEKVAYRLHGTSAKFMLA 151
+ Y G+ A+ L
Sbjct: 127 VIEEKYVAVGSGAQLALG 144
>gi|115454751|ref|NP_001050976.1| Os03g0695600 [Oryza sativa Japonica Group]
gi|109940125|sp|Q9LST6.2|PSB2_ORYSJ RecName: Full=Proteasome subunit beta type-2; AltName: Full=20S
proteasome alpha subunit D; AltName: Full=20S proteasome
subunit beta-4
gi|27552546|gb|AAO19369.1| 20S proteasome beta 4 subunit [Oryza sativa Japonica Group]
gi|108710548|gb|ABF98343.1| Proteasome subunit beta type 2, putative, expressed [Oryza sativa
Japonica Group]
gi|113549447|dbj|BAF12890.1| Os03g0695600 [Oryza sativa Japonica Group]
gi|125545359|gb|EAY91498.1| hypothetical protein OsI_13132 [Oryza sativa Indica Group]
gi|125587570|gb|EAZ28234.1| hypothetical protein OsJ_12208 [Oryza sativa Japonica Group]
gi|149390831|gb|ABR25433.1| 20S proteasome beta subunit d2 [Oryza sativa Indica Group]
gi|215692385|dbj|BAG87805.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708673|dbj|BAG93942.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 212
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 1/164 (0%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
V+ + G DFA++A+DT + + + ++ K+ L + +G SG D ++ +Q
Sbjct: 3 CVIGVVGRDFAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQK 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLS-LLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
++ PLS TA L R PYYV VLL G D +Y D +
Sbjct: 63 NLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYIAT 122
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K+ G + F L+ M L P S + D++ ++E+
Sbjct: 123 FHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEI 166
>gi|229493495|ref|ZP_04387280.1| proteasome, beta subunit [Rhodococcus erythropolis SK121]
gi|229319456|gb|EEN85292.1| proteasome, beta subunit [Rhodococcus erythropolis SK121]
Length = 277
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++AI+ L+A D R++ I S + K++ + +A GI+G ++E+V
Sbjct: 43 HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKVYVTDDYSAAGIAGTAGIAIELVRL 102
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G PL+ G A LS ++ + P V L +D + G
Sbjct: 103 FAVELEHYEKIEGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLDAVDPSTAG 162
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSP 159
+ SYD VG + E+ Y G+ + F +++ L SP
Sbjct: 163 RIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKLYSP 200
>gi|403374952|gb|EJY87444.1| Proteasome subunit beta type-3 [Oxytricha trifallax]
Length = 208
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G +++A++G + IA+DTR S+ V + ++F++ +Q +G+SG D S
Sbjct: 7 NGNSMVAMSGKNCVAIATDTRLSTQLMTVDTSFQRVFKVTDQCLMGVSGLGTDVQTFNSL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG----KGGVYS 127
++ ++N +G+ + +++++ LYE+R PY+V ++ G+D K + +
Sbjct: 67 MKFKLNMYRLKEGREMKSETFSKLVATSLYEKRFGPYFVSPVVAGLDKISDTEYKPVICT 126
Query: 128 YDPVGH-CEKVAYRLHGTSAKFM 149
YD +G+ + + GT A+ +
Sbjct: 127 YDSIGYRSNNGEFEVAGTGAELL 149
>gi|406868327|gb|EKD21364.1| proteasome subunit beta type-3 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 212
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF +G++G D V
Sbjct: 15 NGGACVAMVGKDCVAIACDLRLGLQSLTVSNNFPKIFSY-GDVYLGLTGLATDVSTVSDL 73
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + +S A ++S LYE+R PY+V ++ GID +GK + +D
Sbjct: 74 FRYKVNMYRLREERNISPSTMANLVSSSLYEKRFGPYFVSPVVAGIDQKSGKPFICGFDS 133
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P + D + I+ AL
Sbjct: 134 IG-CIDFAKDFIVGGTASDQLFGTCEGLWEPDLAPEDLFETISQAL 178
>gi|453069113|ref|ZP_21972381.1| 20S proteasome beta-type subunit [Rhodococcus qingshengii BKS
20-40]
gi|452764316|gb|EME22586.1| 20S proteasome beta-type subunit [Rhodococcus qingshengii BKS
20-40]
Length = 292
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++AI+ L+A D R++ I S + K++ + +A GI+G ++E+V
Sbjct: 58 HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKVYVTDDYSAAGIAGTAGIAIELVRL 117
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G PL+ G A LS ++ + P V L +D + G
Sbjct: 118 FAVELEHYEKIEGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLDAVDPSTAG 177
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSP 159
+ SYD VG + E+ Y G+ + F +++ L SP
Sbjct: 178 RIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKLYSP 215
>gi|403726859|ref|ZP_10947391.1| 20S proteasome beta-type subunit [Gordonia rhizosphera NBRC 16068]
gi|403204191|dbj|GAB91722.1| 20S proteasome beta-type subunit [Gordonia rhizosphera NBRC 16068]
Length = 291
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 1 MTEAMLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISG 60
MT A + HG T++A++ P +IA D R++ I + + K + +A GI+G
Sbjct: 49 MTGAGSTDDIPHGTTIVAVSYPGGVVIAGDRRATMGNLIATRDVQKTYITDEYSACGIAG 108
Query: 61 NMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ-----VLLV 115
++E+V E+ + +G PL+L G L+ ++ R +Q LLV
Sbjct: 109 TAGIAIEMVRLFAVELEHYEKIEGIPLTLDGKVSRLATMV--RGNLGAAMQGLAAIPLLV 166
Query: 116 GID-----GTGKGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTD 168
G D T +G ++S+D G H E Y+ G+ + F +S+ L Y S+ D
Sbjct: 167 GYDIDHDSPTERGRIFSFDVAGDRHEEFGGYQAIGSGSVFAKSSLKKL---YRSDLDTDS 223
Query: 169 VITMALEEL 177
+ +A+E L
Sbjct: 224 ALAIAIESL 232
>gi|325048250|emb|CBW54670.1| 20S proteasome beta-subunit [Streptomyces sp. JS360]
gi|385268566|gb|AFI56378.1| 20S proteasome beta-subunit [Streptomyces sp. JS360]
Length = 281
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG TV+A+ D LIA D R++ I + K+ + TA+ +G++ +L++V
Sbjct: 51 VPHGTTVLALVYRDGVLIAGDRRATMGHMISQRDLEKVHPADDHTALAFAGSVGLALDLV 110
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYE---RRIFPYYVQVLLVGID-GTGKGGV 125
Q E+ + +G P++L A L L+ + + + V LL G D TGKG V
Sbjct: 111 KLYQVELTHFEKIEGIPMTLNAKATRLGHLVRQNLGQAMQGLAVVPLLAGYDPETGKGRV 170
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ YD G E+ + G+ + F ++ L Y E D AL+ L
Sbjct: 171 FGYDITGGRFEREDFHAEGSGSVFARGALKKL---YRPEMSRRDAALTALQSL 220
>gi|198472849|ref|XP_002133126.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
gi|198139188|gb|EDY70528.1| GA28829 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 13 GGTVMAIAGPDFALIASDTR---SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
GG V+A+ G + IA+D R S+ G ++ + K+F++ + +G++G +AD V
Sbjct: 4 GGCVLAMQGKECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFLGLTGFLADVNTVW 63
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG-KGGVYSY 128
RLQ N + ++ MLS LLYE R PY+VQ ++ +D + + S
Sbjct: 64 DRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICSV 123
Query: 129 DPVGH-CEKVAYRLHGTSAKFMLASMSYLLSP 159
D +G +K ++ G+ K + L +P
Sbjct: 124 DLIGAPTKKDSFVFCGSCDKQLCGMCETLWTP 155
>gi|443927308|gb|ELU45815.1| 20S proteasome subunit beta 3 [Rhizoctonia solani AG-1 IA]
Length = 415
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+AG + IASD R + V+ N KIF + ++ VG+ G D L + R
Sbjct: 7 NGGSVIAMAGKNCVAIASDLRLGNQALTVACNFEKIFPVTDRLYVGLPGLATDVLTLRER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
L+ +N + + + A ++S LYERR P++++ ++ G+
Sbjct: 67 LRFRVNMYTMKEEREIQPKAFAHLVSSTLYERRFGPFFIEPVIAGL 112
>gi|409043787|gb|EKM53269.1| hypothetical protein PHACADRAFT_259498 [Phanerochaete carnosa
HHB-10118-sp]
Length = 208
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 10 VQH-GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
+QH GG+V+A+ G D IASD R ++++ KIF + ++ VG+ G D +
Sbjct: 4 MQHNGGSVIAMVGKDCVAIASDLRLGVQSLSITSDFEKIFPVTDRLFVGLPGLATDVTTL 63
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG---- 124
+ + +N + + + A+++S LYERR PY+++ ++ G+ T GG
Sbjct: 64 REQFRYRVNMYTIKEEREIEPQTFAQLVSSTLYERRFGPYFIEPVMAGMQKTPAGGYAPF 123
Query: 125 VYSYDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+ + D +G C A + + GT+++ + L P D + I+ L
Sbjct: 124 IAATDLIG-CLNFAKDFVVAGTASEKLFGVAEGLWEPDLEAEDLFETISQTL 174
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V G T + + D ++A+D R+S + K++++ + A+ I+G++ D+ +V
Sbjct: 3 VMKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIV 62
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
L AE G+ + A +LS +L+ R+FP+ Q+++ G D ++S D
Sbjct: 63 RLLTAEAKLYKMRTGRNIPPLACATLLSNILHSSRVFPFLTQIIIGGYDLLEGAKLFSLD 122
Query: 130 PVG 132
P+G
Sbjct: 123 PLG 125
>gi|269126545|ref|YP_003299915.1| 20S proteasome subunits A and B [Thermomonospora curvata DSM 43183]
gi|302595699|sp|D1A2S9.1|PSB1_THECD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PrcB 1; Flags: Precursor
gi|268311503|gb|ACY97877.1| 20S proteasome A and B subunits [Thermomonospora curvata DSM 43183]
Length = 284
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
H T++A+ P ++A D R+++ I + K+FR +AV I+G +E+V
Sbjct: 55 HATTIVAVTFPGGVVMAGDRRATAGNMIAQRDVEKVFRADEFSAVAIAGTAGIGMEIVRL 114
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQV---LLVGIDGTGK-GGVYS 127
Q EI + +G+ LSL G A L+ ++ V L G D + G ++S
Sbjct: 115 FQVEIEHYEKMEGRTLSLEGKANRLATMIRANLGMAMQGLVAVPLFAGYDTEREVGRIFS 174
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YDP G E+ + G+ + F ++ L P S D V AL
Sbjct: 175 YDPAGGRYEEHEHHSIGSGSVFARGALKKLWRPDLSAQDAALVCVQAL 222
>gi|429963276|gb|ELA42820.1| hypothetical protein VICG_00135 [Vittaforma corneae ATCC 50505]
Length = 127
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M++ V G T+MA+ D L+A+D+R+SS +VS K+ ++ +SG+ AD
Sbjct: 1 MIDDPVSTGTTIMALRYRDGVLVAADSRTSSGAYVVSRITNKLHQVSENIIFCVSGSAAD 60
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
+ + +Q+E+N+ + + +P S+ A M+S ++YE + +++ G D T K
Sbjct: 61 TQRIKRIVQSEVNKLSLIENKPPSVDKAANMVSKIIYENK-DNMTAAIIIAGFDTTSK 117
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
++ G T + I D+ ++ +D+R++ I + N K++++ + I+G + D+ +V
Sbjct: 4 LKTGTTTLGITAGDYVIMGTDSRATMGNFISNKNAQKLYKIDTYAGMTIAGLVGDAQVLV 63
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
++AE+ + + + A +LS +L + + +PY VQ+L+ G D K ++S D
Sbjct: 64 RYMRAEMELYRVQRKINMPIEAAATLLSNMLNQSKYYPYMVQLLVGGFD--KKPHIFSID 121
Query: 130 PVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
G + Y G+ + F+ + + Y+ D I +A++ ++
Sbjct: 122 AAGGSVEDEYASTGSGSPFVYGVLE---AEYQPNMKLDDAINLAIKAIS 167
>gi|365866699|ref|ZP_09406306.1| putative 20S proteasome beta-subunit [Streptomyces sp. W007]
gi|364003888|gb|EHM25021.1| putative 20S proteasome beta-subunit [Streptomyces sp. W007]
Length = 258
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T+++ + P ++A D R++ I S + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVSASFPGGVVLAGDRRATMGNMIASRDMQKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY---VQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ V L G D KG ++S
Sbjct: 89 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDVDREKGRIFS 148
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ Y G+ + F +M L Y + +T+ ++ L
Sbjct: 149 YDVTGGRTEESGYAATGSGSIFARNAMKKL---YREDLTEQQALTLVVQAL 196
>gi|225680862|gb|EEH19146.1| proteasome subunit beta type-3 [Paracoccidioides brasiliensis Pb03]
gi|226292563|gb|EEH47983.1| proteasome component PUP3 [Paracoccidioides brasiliensis Pb18]
Length = 192
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF T +G++G D V L+ ++N
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYAPSTYLGLTGLATDVSTVSDVLRFKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDPVGHCEKV 137
+ + +S A ++S LYE+R PY+V +L GI+ TG+ + +D +G C
Sbjct: 61 YRLREERQISPQTLANLVSSSLYEKRFGPYFVSPVLAGINNTTGEPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT+++ + + L P D + I+ AL
Sbjct: 120 AKDFIVSGTASEQLFGTCEGLWEPDLGPEDLFETISQAL 158
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 26 LIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQ 85
++A++ R++ I S K++++ ++ + +G + D+ ++ +Q E + +G+
Sbjct: 27 ILATERRATMGNMIASKKAKKVYQIADRIGMTTAGGVGDAQQLARWVQVECSLYNIRRGR 86
Query: 86 PLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+S+ +A +LS +L R+ PYYVQ+L+ G+D +G +YS D +G
Sbjct: 87 EMSVGASASLLSNILNNNRMMPYYVQLLVGGVD-SGGPSIYSVDALG 132
>gi|156849065|ref|XP_001647413.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
gi|156118099|gb|EDO19555.1| hypothetical protein Kpol_1018p88 [Vanderwaltozyma polyspora DSM
70294]
Length = 205
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA D R + VSNN KIF +GI+G D L +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGNQSLGVSNNFEKIFHY-GHVFLGITGLATDVLTLSEE 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + + + +++S LYERR PY+V ++ GI+ +GK + +D
Sbjct: 67 FRYKTNLYKLREDRLIEPETFTQLVSSTLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEAEDLFETISQAL 171
>gi|401399130|ref|XP_003880481.1| proteasome (Prosome, macropain) subunit, beta type, 1, related
[Neospora caninum Liverpool]
gi|325114891|emb|CBZ50448.1| proteasome (Prosome, macropain) subunit, beta type, 1, related
[Neospora caninum Liverpool]
Length = 191
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
TV+ I G FAL+A D ++S+ + +++ K+ + + +G++G + D L+ +Q
Sbjct: 3 TVIGIRGRTFALVACDRYANSSILRMKDDEDKLMLVDDNKVMGLAGQIGDRLQFGDYIQK 62
Query: 75 EINRSAEAKGQPLSLPGTAEML-SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I+ + LS TA L Y R PY+V V+L G D G +Y D +
Sbjct: 63 NIHLYRFRNNKKLSCAATASFTRQQLAYYLRRSPYHVDVMLAGYDEMGP-HLYWMDYLAS 121
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
V HG +A F+ + P +E + +I M +EL
Sbjct: 122 MASVNKGAHGYAAYFLGGLLDRYYHPELTEEEALKIIEMCKKEL 165
>gi|146323725|ref|XP_752084.2| proteasome component Pup3 [Aspergillus fumigatus Af293]
gi|129557567|gb|EAL90046.2| proteasome component Pup3, putative [Aspergillus fumigatus Af293]
gi|159125002|gb|EDP50119.1| proteasome component Pup3, putative [Aspergillus fumigatus A1163]
Length = 192
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF T +G++G D V L+ ++N
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYLGLTGLATDVNTVSDLLRYKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDPVGHCEKV 137
+ + ++ A ++S LYERR P++V ++ G++ TGK + +D +G C
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT+++ + + L P S D + I+ AL
Sbjct: 120 AKDFIVSGTASEQLFGTCEGLWEPDLSPEDLFETISQAL 158
>gi|345853056|ref|ZP_08805971.1| proteasome subunit beta [Streptomyces zinciresistens K42]
gi|345635458|gb|EGX57050.1| proteasome subunit beta [Streptomyces zinciresistens K42]
Length = 258
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAVTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A LS ++ R +Q L V G D +G +
Sbjct: 89 FQLELEHFEKVEGAQLSLEGKANRLSTMI--RSNLGMAMQGLAVVPLFAGYDVDRERGRI 146
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+SYD G E+ Y G+ + F +M L E + T ++ AL
Sbjct: 147 FSYDVTGGRSEEQGYAATGSGSIFARGAMKKLYRDDLGEAEATTLVVQAL 196
>gi|50309707|ref|XP_454865.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644000|emb|CAG99952.1| KLLA0E20197p [Kluyveromyces lactis]
Length = 205
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D I D R S V+NN KIF +G++G D L +
Sbjct: 8 NGGIVVAMTGKDCVAIGCDLRLGSQSLGVANNFEKIFHY-GHVFLGLTGLATDVLTLSES 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + +P+ +++S LYE+R PY+V ++ GI+ +GK + +D
Sbjct: 67 FRYKTNLYKLREDRPIEPETFTQLVSTSLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEADDLFETISQAL 171
>gi|182439652|ref|YP_001827371.1| 20S proteasome subunit beta [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326780317|ref|ZP_08239582.1| proteasome, beta subunit [Streptomyces griseus XylebKG-1]
gi|302595787|sp|B1W306.1|PSB_STRGG RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|178468168|dbj|BAG22688.1| putative 20S proteasome beta-subunit [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326660650|gb|EGE45496.1| proteasome, beta subunit [Streptomyces griseus XylebKG-1]
Length = 281
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T+++ + P ++A D R++ I S + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVSASFPGGVVLAGDRRATMGNMIASRDMQKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY---VQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDVDREKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ Y G+ + F +M L Y + +T+ ++ L
Sbjct: 172 YDVTGGRTEESGYAATGSGSIFARNAMKKL---YREDLTEEQALTLVVQAL 219
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPN--QTAVGISGNMADSLEVVSR- 71
T + + D ++AS+ R S G ++S K+ ++ GI G+ L+ ++R
Sbjct: 7 TAIGLKVNDGIVLASERRLSYGGYVLSKQAKKVHKIGKFLMAGAGIYGD----LQTLTRI 62
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ EI + G+P+S+ A++LS++LY+ ++ P+ ++L G+D G +Y DP+
Sbjct: 63 MNVEIKYYEISTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVDEKGP-QLYVLDPI 121
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + Y G+ A+ + + ESE+D + +A + +T +K
Sbjct: 122 GSLIEDNYAAVGSGARIAIGVL-------ESEYDPNMNLDIAAQLITKAIK 165
>gi|66825821|ref|XP_646265.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
gi|74858609|sp|Q55D66.1|PSB3_DICDI RecName: Full=Proteasome subunit beta type-3
gi|60474299|gb|EAL72236.1| proteasome subunit beta type 3 [Dictyostelium discoideum AX4]
Length = 205
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG + + G + IASD R +SN+ K++R+ ++ VGISG + D+ + +
Sbjct: 7 NGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDAQTLYQK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG 119
L N + + +S + +L+ +LYE+R PY+ + L+ G++G
Sbjct: 67 LVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLEG 114
>gi|237830643|ref|XP_002364619.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|211962283|gb|EEA97478.1| proteasome subunit beta type 3, putative [Toxoplasma gondii ME49]
gi|221487700|gb|EEE25932.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221507494|gb|EEE33098.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 205
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 91/169 (53%), Gaps = 8/169 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSN--GTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+G V+A+AG D IASDTR N GT+ ++ Q K+F++ N T VG++G +A ++ V
Sbjct: 5 NGSAVVAMAGKDCVGIASDTRLGVNQFGTVSADFQ-KVFKMNNHTFVGLAG-LATDVQTV 62
Query: 70 SRLQAEINRSAEAKGQPLSLPG--TAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVY 126
+ + + + + +P + ++S +LY RR PY+V ++ G+ T + +
Sbjct: 63 HKELVFRSNLYQLREEVTEMPPEIMSNVVSSMLYGRRFAPYFVSPVVAGLHPETHQPFLS 122
Query: 127 SYDPVG-HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
++D +G C + +GTSA+ ++ L P +E + + ++ +L
Sbjct: 123 AFDYIGAACYAKDFVCNGTSAEQLVGVCESLWKPDMNEDELMETLSQSL 171
>gi|75491637|sp|Q53083.1|PSB2_RHOER RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
gi|302595780|sp|C0ZZU7.1|PSB_RHOE4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|847774|gb|AAC45736.1| proteasome beta-type subunit 2 [Rhodococcus erythropolis]
gi|226185778|dbj|BAH33882.1| 20S proteasome beta-type subunit [Rhodococcus erythropolis PR4]
Length = 292
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 10/158 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++AI+ L+A D R++ I S + K++ + +A GI+G ++E+V
Sbjct: 58 HGTTIVAISYAGGVLLAGDRRATMGNLIASRDVQKVYVTDDYSAAGIAGTAGIAIELVRL 117
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G PL+ G A LS ++ + P V L +D + G
Sbjct: 118 FAVELEHYEKIEGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLDAVDPSRAG 177
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSP 159
+ SYD VG + E+ Y G+ + F +++ L SP
Sbjct: 178 RIVSYDVVGGRYEERAGYHAVGSGSLFAKSALKKLYSP 215
>gi|391339684|ref|XP_003744177.1| PREDICTED: proteasome subunit beta type-3-like [Metaseiulus
occidentalis]
Length = 205
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G IA+D R G VS + ++F + + VG+ G D++ V +
Sbjct: 7 NGGIVIAMKGDGCVAIATDRRLGVEGRTVSIDFERVFEMGPRLFVGLPGLATDTITVSQK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ ++N + + ++ A +LS LYE+R PY+++ ++ G+D T + V D
Sbjct: 67 LRFDMNLYELQENRQMTPKTFATLLSGTLYEKRFGPYFIEPVVAGMDPKTNEPYVACMDL 126
Query: 131 VGH-CEKVAYRLHGTSAKFMLASMSYLLSP 159
+G E V + + GT+ + L P
Sbjct: 127 IGSTTETVDFVVSGTAEEEAYGMCETLWRP 156
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 8/174 (4%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLEV 68
Q G T + I D ++A++ R S +S K+F + ++ A+ +G +AD +L
Sbjct: 6 QVGATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALAK 65
Query: 69 VSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ +L A + E K +P ++ A++LS++++ RR P+Y +VL+ G+D G +
Sbjct: 66 ILKLNAR-SYELEVKKKP-TVKAMAKLLSVVMFSRRFMPFYAEVLVGGVDEEGP-HLIVM 122
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
DP+G + Y GT AK ++S L + Y + + +A++ + ++
Sbjct: 123 DPLGSLIEDNYAALGTGAKL---AVSLLDASYRPDMTVEEAKKLAVQAVKAAIE 173
>gi|386839170|ref|YP_006244228.1| 20S proteasome subunit beta [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374099471|gb|AEY88355.1| 20S proteasome beta-subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451792462|gb|AGF62511.1| 20S proteasome beta-subunit [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 258
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 29 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 88
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 89 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDLDREKGRIFS 148
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ + G+ + F +M L +E T ++ AL
Sbjct: 149 YDVTGGRSEEHNFAATGSGSIFARGAMKKLFRNDLTEEQATTLVVQAL 196
>gi|340923906|gb|EGS18809.1| hypothetical protein CTHT_0054190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 206
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G + IA D R VSNN KIF+ + +G++G D V
Sbjct: 8 NGGACVAMVGKNCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVQTVADI 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR P++V ++ G+D TG+ + +D
Sbjct: 68 FRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPWFVSPVVAGLDPKTGEPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT+ + + L P + + I+ AL
Sbjct: 128 IG-CIDFAKDFIVSGTATEQLFGMCESLWEPDLGPEELFETISQAL 172
>gi|344232930|gb|EGV64803.1| proteasome-domain-containing protein [Candida tenuis ATCC 10573]
gi|344232931|gb|EGV64804.1| hypothetical protein CANTEDRAFT_113576 [Candida tenuis ATCC 10573]
Length = 205
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLEVV 69
+GG+ +A+ G D IA D R S ++NN KIF + ++ +G++G D +L V
Sbjct: 8 NGGSAVAMVGKDCVAIACDLRLGSQSLGLANNFEKIFTINDKVMLGLTGLATDVTTLNEV 67
Query: 70 SRLQAEI-NRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
R + + E K +P + A ++S LYE+R PY+ ++ G++ K + +
Sbjct: 68 FRFKNNLYELREERKIEPQTF---ANLVSSTLYEKRFGPYFCGPVVAGLNKENKPFICGF 124
Query: 129 DPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
D +G C A + + GT+++ + L P D + I+ AL
Sbjct: 125 DLIG-CIDFAKDFIVSGTASEQLYGMCESLYEPNLEADDLFETISQAL 171
>gi|387593397|gb|EIJ88421.1| hypothetical protein NEQG_01111 [Nematocida parisii ERTm3]
gi|387597054|gb|EIJ94674.1| hypothetical protein NEPG_00197 [Nematocida parisii ERTm1]
Length = 204
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 64/121 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+ +A+ G D +I +D R +N + + +N +++++ ++ + ++G + D +
Sbjct: 7 YGGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKMTDRLILSLTGFVPDCQILYKT 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ +N + + + A +LS +LY +R P+ + L+VG D VY+ D +
Sbjct: 67 LRKHVNMFKLNEQREIEPKEFACLLSYILYSKRFSPFLISPLIVGFDRENNPHVYTMDLI 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|148679117|gb|EDL11064.1| mCG13639 [Mus musculus]
Length = 205
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG VMA+ + IA+D R +V+ + KIF + ++ VG++G D V R
Sbjct: 7 NGGAVMAMKEKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYVGLAGLAIDVQTVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N +G + M++ LLYE+ PYY + ++ G+D T K + S D
Sbjct: 67 LKFLLNLYELKEGWQIKPYTLMSMVANLLYEKWFGPYYTEPVIAGLDPKTFKPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + + GT ++ M L P
Sbjct: 127 IG-CPMVTDDFVVSGTCSEPMYRMCESLWEP 156
>gi|195161717|ref|XP_002021708.1| GL26359 [Drosophila persimilis]
gi|194103508|gb|EDW25551.1| GL26359 [Drosophila persimilis]
Length = 204
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 5/152 (3%)
Query: 13 GGTVMAIAGPDFALIASDTR---SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
GG V+A+ G + IA+D R S+ G ++ + K+F++ + +G++G +AD V
Sbjct: 4 GGCVLAMQGNECVAIATDHRLGCGSNPGQRIAGDFKKVFKVGPRMFLGLTGFLADVNTVW 63
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG-KGGVYSY 128
RLQ N + ++ MLS LLYE R PY+VQ ++ +D + + S
Sbjct: 64 DRLQYRQNLYEIKESCEMTPEAFTTMLSNLLYEHRFGPYHVQAVVAALDPLALRPYICSV 123
Query: 129 DPVGH-CEKVAYRLHGTSAKFMLASMSYLLSP 159
D +G +K ++ G+ K + L +P
Sbjct: 124 DLIGAPTKKDSFVFCGSCDKQLCGMCETLWTP 155
>gi|380481881|emb|CCF41580.1| proteasome component PUP3 [Colletotrichum higginsianum]
Length = 205
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQY-GDVFLGLTGLATDVTTVGDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR PY+V ++ G+D TGK + +D
Sbjct: 67 FRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT+++ + L P
Sbjct: 127 IG-CIDFAKDFIVSGTASEQLFGMCESLWEP 156
>gi|403713796|ref|ZP_10939870.1| 20S proteasome beta-subunit [Kineosphaera limosa NBRC 100340]
gi|403212017|dbj|GAB94553.1| 20S proteasome beta-subunit [Kineosphaera limosa NBRC 100340]
Length = 292
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++ +A L+A D R++ I S + K+F + +AVGI+G ++E+V
Sbjct: 67 HGTTIVTLAYDGGVLLAGDRRATMGNIIASRDIEKVFVTDDHSAVGIAGTAGVAIEMVKL 126
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A L+ +L R +Q L V G D G G +
Sbjct: 127 FQVELEHFEKIEGAVLSLEGKANRLAAML--RGNLGLAMQGLAVVPLFAGYDLDYGHGRM 184
Query: 126 YSYDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSP 159
+SYD G C E+ + G+ + F ++ L P
Sbjct: 185 FSYDVTGGCYEEREHHSVGSGSLFARGALKKLWRP 219
>gi|310793894|gb|EFQ29355.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 205
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQY-GDVFLGLTGLATDVTTVGDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR PY+V ++ G+D TGK + +D
Sbjct: 67 FRYKVNMYRLREERNIAPTTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT+++ + L P
Sbjct: 127 IG-CIDFAKDFIVSGTASEQLFGMCESLWEP 156
>gi|241957591|ref|XP_002421515.1| macropain subunit, putative; multicatalytic endopeptidase complex
subunit, putative; proteasome component, putative
[Candida dubliniensis CD36]
gi|223644859|emb|CAX40854.1| macropain subunit, putative [Candida dubliniensis CD36]
Length = 206
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + + +GG +A+ G D IASD R VSNN KIF + ++T +G++G D
Sbjct: 1 MSDPFSINGGAAVAMIGKDCIAIASDLRLGQQSLGVSNNFEKIFSVGDKTFLGLTGLATD 60
Query: 65 --SLEVVSRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGT- 120
+L+ + R + + + E + +P +L A ++S LYERR P++V ++ G+
Sbjct: 61 VITLKELFRFKTNLYKLREERNIEPSTL---ANLVSSSLYERRFGPWFVSPIVAGLSSKD 117
Query: 121 GKGGVYSYDPVGHCEKVAYRL--HGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
K + +D +G C ++ GT++ + L P D + I+ AL
Sbjct: 118 NKPFICGFDSIG-CIDFSHDFIVSGTASDQLYGMCESLYEPNLEPEDLFETISQAL 172
>gi|452824977|gb|EME31976.1| proteasome beta subunit [Galdieria sulphuraria]
Length = 206
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+AG + IA+D R T + + +IF++ ++ +G++G D + +R
Sbjct: 9 NGGCVLAMAGDNCVAIAADRRFGVQQTTIGTDTTRIFKINDRLMLGLTGLRTDVTTLYNR 68
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+N + + + A M++ LY RR PY+V+ ++ G+ G+ + + D +
Sbjct: 69 FVQRLNLYRLREEREIKPASFANMVASTLYSRRFSPYFVEPVVAGLTEKGEPYLCAQDLL 128
Query: 132 GH---------CEKVAYRLHGTSAKFMLASMS 154
G A L+GTS F ++S
Sbjct: 129 GAPLFAEDFVVSGTCAESLYGTSETFWKPNLS 160
>gi|312378864|gb|EFR25317.1| hypothetical protein AND_09469 [Anopheles darlingi]
Length = 205
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IA+D R ++ + K+F + +G+ G D L V R
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVYQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ A MLS LYE+R PY+++ ++ G+D T + + + D
Sbjct: 67 LIFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPFICNMDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT A+ + L P + +VI+ AL
Sbjct: 127 IG-CPNLPNDFVVAGTCAEQLYGMCETLWKPELEPDNLFEVISQAL 171
>gi|224082072|ref|XP_002198635.1| PREDICTED: proteasome subunit beta type-2 [Taeniopygia guttata]
Length = 201
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPD+ L+A+DT ++++ + ++ K+F++ + + G D+++ +Q
Sbjct: 4 LIGIQGPDYVLVAADTVAATSIIQMKHDHDKMFKMSEKILLLCVGEPGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D +Y D +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDDHEGPALYYMDYLAA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K + HG A L+ + P + + D++ LEEL
Sbjct: 124 LAKTPFAAHGYGAFLTLSILDRYYKPGITREEAVDLLKQCLEEL 167
>gi|15679213|ref|NP_276330.1| proteasome subunit beta [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6685781|sp|O27270.1|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 210
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + I D + A++ R+S I KIF++ A I+G++AD+ ++ L
Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYL 68
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+AE + +S+ A + + +L+ R +P+ VQ LL G+D G +YS DP G
Sbjct: 69 KAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENG-AKIYSLDPSG 127
>gi|366989209|ref|XP_003674372.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
gi|342300235|emb|CCC67993.1| hypothetical protein NCAS_0A14350 [Naumovozyma castellii CBS 4309]
Length = 205
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA D R S VSNN KIF +G++G D +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNNFEKIFHY-GHVFLGLTGLATDVTTLSET 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + +P+ +++S LYE+R PY+V ++ GI+ T K + +D
Sbjct: 67 FRYKTNLYKLKEDRPIEPDTFIQLVSTTLYEKRFGPYFVGPVVAGINSQTEKPFIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQAL 171
>gi|302306791|ref|NP_983166.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|299788687|gb|AAS50990.2| ABR217Cp [Ashbya gossypii ATCC 10895]
gi|374106369|gb|AEY95279.1| FABR217Cp [Ashbya gossypii FDAG1]
Length = 205
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA D R S VSN KIF +G++G D +
Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNRFEKIFNF-GHVFLGLTGLATDVTTLYET 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + +P+ ++++S LYERR PY+V ++ GI T K + +D
Sbjct: 67 FRYKTNMYKMQEDRPIEPNTFSQLVSSTLYERRFGPYFVGPVVAGIHSKTKKPYIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G E+ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIEESKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQAL 171
>gi|365981473|ref|XP_003667570.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
gi|343766336|emb|CCD22327.1| hypothetical protein NDAI_0A01690 [Naumovozyma dairenensis CBS 421]
Length = 205
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+AG D IA D R S VSNN KIF +GI+G D +
Sbjct: 8 NGGIVVAMAGKDCVAIACDLRLGSQSLGVSNNFEKIFHY-GHVFLGITGLATDVTTLSET 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + + + +++S LYE+R PY+V ++ GI+ +GK + +D
Sbjct: 67 FRYKSNLYELKEDRAIEPETFTQLVSSTLYEKRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLESEDLFETISQAL 171
>gi|355714007|gb|AES04858.1| proteasome subunit, beta type, 1 [Mustela putorius furo]
Length = 100
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 9 YVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEV 68
Y +GGTV+AIAG DF+++ASDTR S +I + + K ++L ++T +G SG D L +
Sbjct: 33 YAFNGGTVLAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTL 92
Query: 69 VSRLQAEI 76
++A +
Sbjct: 93 TKIIEARL 100
>gi|325092329|gb|EGC45639.1| proteasome component [Ajellomyces capsulatus H88]
Length = 192
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSN+ KIF T +G++G D V L+ ++N
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNSFPKIFNYAPSTYLGLTGLATDVSSVSDLLRYKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDPVGHCEKV 137
+ + +S A ++S LYE+R PY+V +L GI+ TGK + +D +G C
Sbjct: 61 YRLREERQISPQTLANLISSSLYEKRFGPYFVSPVLAGINSTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + + L P D + I+ AL
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLGPDDLFETISQAL 158
>gi|299756258|ref|XP_002912180.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
gi|298411595|gb|EFI28686.1| proteasome subunit beta type 3 [Coprinopsis cinerea okayama7#130]
Length = 205
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 61/118 (51%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+GG+V+A+ G D IASD R + ++++ ++F + ++ +G+ G D +
Sbjct: 3 HNGGSVIAMLGKDCVAIASDLRLGNQALGIASDFQRVFPMTDRIYLGLPGLATDVATLHE 62
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
R + +N +G+ + A ++S LYERR PY+ + ++ GI T G + +
Sbjct: 63 RFRFRVNMYTIKEGREIEPEVFAHLVSSTLYERRFGPYFCEPVMAGISKTPTGKIKPF 120
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
++ V G T + + D ++A++ R++ I S KI+R+ ++ A+ +G + D+
Sbjct: 5 IQDKVYKGTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIADRVAMTTAGAVGDA 64
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGV 125
+ + EI K + ++ A +LS +L R FPY+VQ+L+ G+D G +
Sbjct: 65 QFLARLISVEIKLYEIRKEEKPTVKAIATLLSNILNSVRWFPYFVQLLVGGVDKRGP-SI 123
Query: 126 YSYDPVG 132
YS D +G
Sbjct: 124 YSIDLLG 130
>gi|195389042|ref|XP_002053187.1| GJ23747 [Drosophila virilis]
gi|194151273|gb|EDW66707.1| GJ23747 [Drosophila virilis]
Length = 208
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R + K+F L + +G++G D + V +R
Sbjct: 10 NGGCVIAMQGKDCIGIATDRRFGLQSHTAGEDCQKVFHLSPRLYLGLTGLQTDIMTVYNR 69
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L N +G+ +S E+LS LLYE R P++V+ ++ G+D
Sbjct: 70 LLYRKNVYEINEGREVSPKVLTELLSHLLYEHRFGPFFVEPVIAGLD 116
>gi|123445636|ref|XP_001311576.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121893391|gb|EAX98646.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 191
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
+++ + GPD+ LIA+D+ SS+ +S N +I +L ++ A+ +SG D L++ LQ
Sbjct: 3 SIVGLQGPDWVLIAADSSVSSSIICMSENYDRIAQLDDRHALAMSGETGDCLQLSEYLQG 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYER-RIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A + + + R PY V +LL G D GK +Y D +G
Sbjct: 63 NVALYKFRNGVELSSDALAHFIRHTMAKAVRKSPYEVNMLLSGYD--GKPHLYFMDYLGT 120
Query: 134 CEKVAYRLHGTSAKFMLA 151
+ + Y G F+++
Sbjct: 121 LQSIPYGAQGYCQYFVMS 138
>gi|237840493|ref|XP_002369544.1| proteasome subunit beta type 2, putative [Toxoplasma gondii ME49]
gi|211967208|gb|EEB02404.1| proteasome subunit beta type 2, putative [Toxoplasma gondii ME49]
gi|221483239|gb|EEE21563.1| proteasome subunit beta type, putative [Toxoplasma gondii GT1]
gi|221504161|gb|EEE29838.1| proteasome subunit beta type, putative [Toxoplasma gondii VEG]
Length = 191
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
TV+ I G DFAL+A D ++S+ + +++ K+ + + +G +G + D L+ +Q
Sbjct: 3 TVIGIRGRDFALVACDRYANSSILRMKDDEDKLLLVDDDKVMGFAGQIGDRLQFGDYIQK 62
Query: 75 EINRSAEAKGQPLSLPGTAEML-SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I+ + L A L Y R PY+V V+L G D G +Y D +
Sbjct: 63 NIHLYRFRNNKKLGCAAAANFTRQQLAYYLRRSPYHVDVMLAGYDEMGP-HLYWMDYLAS 121
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
V HG +A F+ + P +E + +I M +EL
Sbjct: 122 MVSVNKAAHGYAAYFLGGLLDRYYHPELTEEEALKIIEMCKKEL 165
>gi|378725424|gb|EHY51883.1| proteasome component PUP3 [Exophiala dermatitidis NIH/UT8656]
Length = 192
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF +G++G D V + ++N
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFTYGPSVYLGLTGLATDVQTVSDTFRYKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPVGHCEKV 137
+ + +S A ++S LYERR P++V +L GI+ TGK + +D +G C
Sbjct: 61 YRLREERNISPQTLANLVSSSLYERRFGPWFVSPVLAGINHTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + + L P S D + I+ AL
Sbjct: 120 AKDFIVAGTASDQLFGTCEGLWEPDLSPEDLFETISQAL 158
>gi|418050329|ref|ZP_12688415.1| proteasome, beta subunit [Mycobacterium rhodesiae JS60]
gi|353187953|gb|EHB53474.1| proteasome, beta subunit [Mycobacterium rhodesiae JS60]
Length = 292
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P LIA D RS+ I + K++ + TA GI+G A ++E
Sbjct: 50 HGTTIVALKYPGGVLIAGDRRSTQGNMIAGRDVQKVYITDDYTATGIAGTAAIAVEFARL 109
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-----GTGKG 123
E+ + +G PL+ PG LS ++ + + LLVG D G G
Sbjct: 110 YAVELEHYEKVEGVPLTFPGKVNRLSTMVRGNLGAALQGFVALPLLVGYDLDDPNAEGAG 169
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ S+D G + E+ Y+ G+ + F +S+ L Y D + A+E L
Sbjct: 170 RIVSFDAAGGWNIEEEGYQSVGSGSIFAKSSIKKL---YSGVSDADSALRAAVEAL 222
>gi|29833223|ref|NP_827857.1| 20S proteasome beta-subunit [Streptomyces avermitilis MA-4680]
gi|81716602|sp|Q828I8.1|PSB2_STRAW RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PrcB 2; Flags: Precursor
gi|29610345|dbj|BAC74392.1| putative 20S proteasome beta-subunit [Streptomyces avermitilis
MA-4680]
Length = 281
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVATTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY---VQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGATLSLEGKANRLSTMIRSNLAMAMQGLAVVPLFAGYDVDREKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ Y G+ + F +M L +E T ++ AL
Sbjct: 172 YDVTGGRSEEHGYASTGSGSIFARGAMKKLYRDDLTEQQATTLVIQAL 219
>gi|408676956|ref|YP_006876783.1| Proteasome subunit beta , bacterial [Streptomyces venezuelae ATCC
10712]
gi|328881285|emb|CCA54524.1| Proteasome subunit beta , bacterial [Streptomyces venezuelae ATCC
10712]
Length = 279
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 50 HGTTIVAATFAGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 109
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A LS ++ R +Q L V G D G KG +
Sbjct: 110 FQLELEHFEKVEGVTLSLEGKANRLSTMI--RGNLGMAMQGLAVVPLFAGWDEGKEKGRI 167
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+SYD G E+ Y G+ + F SM L +E T ++ AL
Sbjct: 168 FSYDVTGGRSEEQGYAATGSGSIFARGSMKKLYRADLTEEQATTLVVQAL 217
>gi|377558137|ref|ZP_09787751.1| 20S proteasome beta-type subunit [Gordonia otitidis NBRC 100426]
gi|377524706|dbj|GAB32916.1| 20S proteasome beta-type subunit [Gordonia otitidis NBRC 100426]
Length = 293
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ HG T++A++ P ++A D R++ I + + K++ +A GI+G ++E+V
Sbjct: 60 IPHGTTIVAVSFPGGVVLAGDRRATMGNIIATRDVQKVYITDEYSAAGIAGTAGIAIEMV 119
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ-----VLLVGID-----G 119
E+ + +G PL+L G L+ ++ R +Q LLVG D
Sbjct: 120 RLFTVELEHYEKIEGVPLTLDGKVSRLASMV--RGNLGAAMQGLAAIPLLVGYDIDHDSP 177
Query: 120 TGKGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
T +G ++S+D G H E Y+ G+ + F +S+ L Y S+ D + +A+E L
Sbjct: 178 TERGRIFSFDVAGDRHEEFGGYQAIGSGSVFAKSSLKKL---YRSDLDADSALAIAVESL 234
>gi|331245973|ref|XP_003335621.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309314611|gb|EFP91202.1| proteasome component PUP3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G IA D R + V+ N K+F++ ++ +G+ G D+ + +
Sbjct: 7 NGGSVVAMVGKGCVAIACDLRLGNQALTVACNFEKVFQVTDKMFIGLPGLATDTFTLKNV 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ +N + + + A ++S LY++R PY+V+ ++ G+D + + + D +
Sbjct: 67 FRHRVNMYKMKEERVIEPQTMAHLISSTLYQKRFGPYFVEPVVAGLDSKNEPFIAATDLI 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C A + + GT++ + L P + D + I+ L
Sbjct: 127 G-CINFAKDFVVSGTASSKLFGMAEALWEPDLAPEDLFETISQTL 170
>gi|21355629|ref|NP_649858.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|194903499|ref|XP_001980880.1| GG17403 [Drosophila erecta]
gi|195330532|ref|XP_002031957.1| GM26292 [Drosophila sechellia]
gi|195499293|ref|XP_002096887.1| GE24806 [Drosophila yakuba]
gi|195572401|ref|XP_002104184.1| GD20828 [Drosophila simulans]
gi|17380236|sp|Q9XYN7.1|PSB3_DROME RecName: Full=Proteasome subunit beta type-3; AltName: Full=20S
proteasome subunit beta-3
gi|4559288|gb|AAD22968.1|AF116898_1 20S proteasome beta3 subunit [Drosophila melanogaster]
gi|7299121|gb|AAF54320.1| proteasome beta3 subunit [Drosophila melanogaster]
gi|20151995|gb|AAM11357.1| LD16402p [Drosophila melanogaster]
gi|116806244|emb|CAL26545.1| CG11981 [Drosophila melanogaster]
gi|116806246|emb|CAL26546.1| CG11981 [Drosophila melanogaster]
gi|116806248|emb|CAL26547.1| CG11981 [Drosophila melanogaster]
gi|116806250|emb|CAL26548.1| CG11981 [Drosophila melanogaster]
gi|116806252|emb|CAL26549.1| CG11981 [Drosophila melanogaster]
gi|116806254|emb|CAL26550.1| CG11981 [Drosophila melanogaster]
gi|116806256|emb|CAL26551.1| CG11981 [Drosophila melanogaster]
gi|116806258|emb|CAL26552.1| CG11981 [Drosophila melanogaster]
gi|116806260|emb|CAL26553.1| CG11981 [Drosophila simulans]
gi|190652583|gb|EDV49838.1| GG17403 [Drosophila erecta]
gi|194120900|gb|EDW42943.1| GM26292 [Drosophila sechellia]
gi|194182988|gb|EDW96599.1| GE24806 [Drosophila yakuba]
gi|194200111|gb|EDX13687.1| GD20828 [Drosophila simulans]
gi|220942808|gb|ACL83947.1| Prosbeta3-PA [synthetic construct]
gi|223967619|emb|CAR93540.1| CG11981-PA [Drosophila melanogaster]
gi|223967621|emb|CAR93541.1| CG11981-PA [Drosophila melanogaster]
gi|223967623|emb|CAR93542.1| CG11981-PA [Drosophila melanogaster]
gi|223967625|emb|CAR93543.1| CG11981-PA [Drosophila melanogaster]
gi|223967627|emb|CAR93544.1| CG11981-PA [Drosophila melanogaster]
gi|223967629|emb|CAR93545.1| CG11981-PA [Drosophila melanogaster]
gi|223967631|emb|CAR93546.1| CG11981-PA [Drosophila melanogaster]
gi|223967633|emb|CAR93547.1| CG11981-PA [Drosophila melanogaster]
gi|223967635|emb|CAR93548.1| CG11981-PA [Drosophila melanogaster]
gi|223967637|emb|CAR93549.1| CG11981-PA [Drosophila melanogaster]
gi|223967639|emb|CAR93550.1| CG11981-PA [Drosophila melanogaster]
Length = 205
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA+D R +S + K+F + + +G++G D L V R
Sbjct: 7 NGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L N + + + + M+S LYE R PY+++ ++ G+D
Sbjct: 67 LMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLD 113
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V+ G T + + + ++AS+ R++ I S KI+ + ++ A+ +G + D+ +V
Sbjct: 7 VKKGTTTIGLICGESVVLASEKRATMGSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALV 66
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
+ E+ + +P+++ G + +LS ++ +R +PY VQ+L+ GID G +Y+ D
Sbjct: 67 RIMTVELQLYKIRRNEPMTVKGISTLLSNVMNGQRYYPYIVQLLIGGIDRDG-AHLYTID 125
Query: 130 PVG 132
P G
Sbjct: 126 PFG 128
>gi|145514243|ref|XP_001443032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410393|emb|CAK75635.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+++ + G + +A D R + ++ N K+F++ + + +SG +D +
Sbjct: 8 NGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIHTFYAL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++ EIN + + + A +++ LYERR P++V ++ G++ GK + +YD +
Sbjct: 68 MEKEINLYNLKENRKMKPTTFANLVASALYERRFGPFFVTPIVAGLE-NGKPILATYDSI 126
Query: 132 GHCEKV-AYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G + +++ GT ++ + P S + +VI +L
Sbjct: 127 GCKSDLDDFQVGGTGGNYIYGACEAFFKPDLSPEELEEVIGQSL 170
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 63/123 (51%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V G T + + D ++A+D R+S + K++++ + A+ I+G++ D+ +V
Sbjct: 3 VMKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIV 62
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYD 129
L AE G+ + A +LS +L+ R+FP+ Q+++ G D ++S D
Sbjct: 63 RLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLD 122
Query: 130 PVG 132
P+G
Sbjct: 123 PLG 125
>gi|300120261|emb|CBK19815.2| unnamed protein product [Blastocystis hominis]
Length = 205
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G V+A+ G + IASD R + V N KI+++ +Q +G +G +D+
Sbjct: 8 NGAAVIAMKGKNCVAIASDLRLGAQFQTVDCNFQKIYKMTDQIFIGFNGLQSDAQTFAQL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L E+N + + +S ++ Y+ R PY+V+ ++ G+D G+ V + D +
Sbjct: 68 LTYEVNSYKLRENRDISPEAFGSLVRTKQYQHRWGPYFVEPVIAGLDKNGEPYVNAMDTI 127
Query: 132 G 132
G
Sbjct: 128 G 128
>gi|386844277|ref|YP_006249335.1| 20S proteasome subunit beta [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374104578|gb|AEY93462.1| 20S proteasome beta-subunit [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451797570|gb|AGF67619.1| 20S proteasome beta-subunit [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 284
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG TV+A+ D LIA D R++ I + K+ + TAV +G + +L++V
Sbjct: 53 HGTTVLALTYRDGVLIAGDRRATMGNLIAQRDLEKVHPADDHTAVAFAGTVGLALDMVRL 112
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYE---RRIFPYYVQVLLVGID----GTGKGG 124
Q E+ + +G P++L A L+ ++ + + + V LLVG D G G+G
Sbjct: 113 YQVELTHFEKIEGVPMTLGAKATRLAAMIRQNLAQAMQGLVVVPLLVGYDLTAPGGGRGR 172
Query: 125 VYSYDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSP 159
++S+D G EK + G+ + + ++ L P
Sbjct: 173 IFSFDAAGGLYEKRHFHAEGSGSPYARGALKKLYRP 208
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 5 MLEHYVQ--HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
M E Y + G T + + D ++AS+ R++ I S KI+++ ++ + +G +
Sbjct: 1 MNEQYREGMTGTTTVGLVLRDAVVLASEMRATMGYLIASKKAKKIYQIADRIGMTTAGGV 60
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D+ ++ + E + +G+P+++ A +LS +L R +P+YVQ+L+ G+D +
Sbjct: 61 GDAQQIARLMTVECSLYQIRRGRPITIGAVATLLSNILNANRYYPFYVQLLVGGVD---E 117
Query: 123 GG--VYSYDPVGHCEK 136
GG +Y+ D +G +
Sbjct: 118 GGPKLYAVDALGGASR 133
>gi|383780529|ref|YP_005465095.1| 20S proteasome subunit beta [Actinoplanes missouriensis 431]
gi|381373761|dbj|BAL90579.1| putative 20S proteasome beta-subunit [Actinoplanes missouriensis
431]
Length = 279
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++AIA D ++A D R++ I S + K+ + + +GI+G +E++
Sbjct: 52 HGTTIVAIATADGVVMAGDRRATMGNLIASRDIRKVHPADSYSLIGIAGTAGIGIELIRL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
Q E+ + +G LSL G A L+ ++ + P + L D G
Sbjct: 112 FQVELEHYEKIEGAMLSLDGKANRLAAMVRGNLGAAMQGLAVVPLFAGFDLSPADPARAG 171
Query: 124 GVYSYDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++S+D G E+ Y G+ + F + S L Y + D IT+A+E L
Sbjct: 172 RIFSFDVAGGLYEETGYEAIGSGSLF---AKSALKKRYRAGVSTADAITLAVEAL 223
>gi|383864554|ref|XP_003707743.1| PREDICTED: proteasome subunit beta type-2-like [Megachile
rotundata]
Length = 207
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
++ I DF L+A+D + + ++ N++ KI ++ ++ + +SG D+++ +
Sbjct: 3 CLIGIQFKDFVLVAADMTTVQSIMVMKNDEQKIHKMSDKLVMAVSGQSGDTIQFSEYIGK 62
Query: 75 EINRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
I G LS A +L Y R PY+V +L+ G D +Y D +
Sbjct: 63 NIQLYKMRNGYELSPKAAASFTRRNLADYLRSTTPYFVNLLMAGYDNNNGPELYFIDYLA 122
Query: 133 HCEKVAYRLHGTSAKFMLA 151
C +V Y HG F L+
Sbjct: 123 SCVRVPYAAHGYGGFFSLS 141
>gi|123382702|ref|XP_001298721.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121879369|gb|EAX85791.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 191
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
+++ + GPD+ LIA+D+ SS+ +S N +I +L ++ A+ +SG D L++ LQ
Sbjct: 3 SIVGLQGPDWVLIAADSSVSSSIICMSENYDRIAQLDDRHALAMSGETGDCLQLSEFLQG 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYER-RIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A + + + R PY V +LL G D GK +Y D +G
Sbjct: 63 NVALYKFRNGVELSSDALAHFIRHTMAKAVRKSPYEVNMLLSGYD--GKPHLYFMDYLGT 120
Query: 134 CEKVAYRLHGTSAKFMLA 151
+ + Y G F+++
Sbjct: 121 LQSIPYGAQGYCQYFVMS 138
>gi|345567463|gb|EGX50395.1| hypothetical protein AOL_s00076g159 [Arthrobotrys oligospora ATCC
24927]
Length = 205
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + +GG +A+AG D IA D R +SNN KIF + +G++G D
Sbjct: 1 MSNPFTLNGGACLAMAGKDCVAIACDLRLGQQALTLSNNFPKIFNYGD-VFLGLTGLATD 59
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKG 123
+ S + ++N + + + A ++S LYERR PY+V ++ GI+ TGK
Sbjct: 60 VQTMHSLFRYKVNLYRLREEREIEPETMANLVSSSLYERRFGPYFVSPVVAGINQRTGKP 119
Query: 124 GVYSYDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+ +D +G C A + + GT++ + L P
Sbjct: 120 FICGFDSIG-CIDFAKDFIVSGTASDQLFGVAEGLWEP 156
>gi|441520044|ref|ZP_21001714.1| 20S proteasome beta-type subunit [Gordonia sihwensis NBRC 108236]
gi|441460345|dbj|GAC59675.1| 20S proteasome beta-type subunit [Gordonia sihwensis NBRC 108236]
Length = 288
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 16/179 (8%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ HG T++A++ P ++A D RS+ I + + K++ +A GI+G ++E+V
Sbjct: 44 IPHGTTIVAVSYPGGVVLAGDRRSTMGNLIATRDVQKVYVTDEYSAAGIAGTAGIAIEMV 103
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQV-----LLVGIDGT---- 120
E+ + +G PL+L G L+ ++ R +Q LLVG D
Sbjct: 104 RLFAVELEHYEKIEGVPLTLDGKVARLATMV--RSNLGAALQGLAAIPLLVGFDAEADAG 161
Query: 121 GKGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+G ++S+D G H E Y G+ + F +S+ L Y S+ + + +A+E L
Sbjct: 162 ARGRIFSFDVAGSRHEETGGYDAIGSGSVFAKSSLKKL---YRSDLSADEALAVAVEAL 217
>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+ G T + I D ++A+DT++S + + + N KI + ++ A+ +G++ D +
Sbjct: 23 KTGTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIAR 82
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
L+AE G+P+S A +LS +L E R FPY VQ+++ G + + + DP
Sbjct: 83 ILEAEARYYQFTWGRPMSTKAMANLLSNILNENRWFPYLVQIIIGGY--VEEPTIANLDP 140
Query: 131 VGHCEKVAYRLHGTSAKFMLA 151
+G Y G+ F LA
Sbjct: 141 LGGLIFEDYTATGSGTPFALA 161
>gi|385676224|ref|ZP_10050152.1| 20S proteasome subunits A and B [Amycolatopsis sp. ATCC 39116]
Length = 286
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 13/176 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A++ LIA D R++S I S + K+ +AVGI+G+ +LE+V
Sbjct: 54 HGTTIVAVSFSGGVLIAGDRRATSGNLIASRDMEKVHVTDGYSAVGIAGSAGIALELVRL 113
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G PLSL G L+ ++ P +V + D G
Sbjct: 114 YAVELAHYEKIEGVPLSLDGKTNKLATMVKGNLDVAMAGLAALPLFVGYDIEADDPKRAG 173
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ SYD G + E+ Y G+ + F +++ L Y+ E D + A+E L
Sbjct: 174 RIVSYDVTGGRYEERAGYHAIGSGSLFAKSALKKL---YDPEADEETAVRTAVESL 226
>gi|389581871|dbj|GAB64592.1| 20S proteasome subunit beta-3 [Plasmodium cynomolgi strain B]
Length = 204
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 19 IAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEIN 77
++G IA D R ++N T +S N KIF++ + VG+SG D + L+ +N
Sbjct: 1 MSGAQCVAIACDLRLGANNFTTISTNFTKIFKMNDYVYVGLSGLATDIQTLYELLRYRVN 60
Query: 78 RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG------IDGTGKG------GV 125
+ P+ + A MLS +LY R PY+V ++VG ID GK +
Sbjct: 61 LYEIRQESPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTIDDEGKKISTFEPYL 120
Query: 126 YSYDPVG-HCEKVAYRLHGTSAK 147
+YD +G CE + ++G + +
Sbjct: 121 TAYDLIGAKCETNDFVVNGVTGE 143
>gi|328770084|gb|EGF80126.1| hypothetical protein BATDEDRAFT_88542 [Batrachochytrium
dendrobatidis JAM81]
Length = 204
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+AG + IA+D R + + KIF + ++T +G++G D + R
Sbjct: 7 NGSAIIAMAGKNCVAIAADRRFGVQALTLGTDFQKIFPITDKTYLGLAGLATDVTTLKDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ ++N + + +S + M+S YE+R PY+V+ ++ G++ + S D +
Sbjct: 67 FRYKVNMYHLEEEREISPKTFSHMVSSTQYEKRFGPYFVEPIVAGLEKDNTPFICSMDTI 126
Query: 132 GHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C A + + GT++ M L P + +VI+ AL
Sbjct: 127 G-CINFAKDFVVCGTASDQMNGMCESLWEPDLEPEELFEVISQAL 170
>gi|163840778|ref|YP_001625183.1| 20S proteasome subunit beta [Renibacterium salmoninarum ATCC 33209]
gi|302595779|sp|A9WSI1.1|PSB_RENSM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|162954254|gb|ABY23769.1| 20S proteasome beta-subunit [Renibacterium salmoninarum ATCC 33209]
Length = 279
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
H T++A+ L+A D R++ I S + K+F + +GI+G ++++
Sbjct: 55 HATTIVAMTFAGGVLMAGDRRATMGTMIASRHIEKVFPADGYSVLGIAGTAGLAIDITKL 114
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G PLSL G A L ++ R P +Q L V G D +G +
Sbjct: 115 FQVELEHYEKIEGTPLSLEGKANRLGAMV--RGNLPMALQGLAVVPLFAGFDPALSQGRL 172
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+SYD G E++ + G+ + F +M L P SE +D + +A+E L
Sbjct: 173 FSYDVTGGRYEELEHHSVGSGSVFARGAMKKLWKPGLSE---SDAVQVAVESL 222
>gi|358391261|gb|EHK40665.1| beta subunit Pup3 of the 20S proteasome [Trichoderma atroviride IMI
206040]
Length = 205
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R +SNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQY-GDVFLGLTGLATDVSTVSDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR PY+V ++ G+D TGK + +D
Sbjct: 67 FRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT+++ + L P
Sbjct: 127 IG-CIDFAKDFIVSGTASEQLFGMCEGLWEP 156
>gi|291225400|ref|XP_002732675.1| PREDICTED: proteasome beta 3 subunit-like [Saccoglossus
kowalevskii]
Length = 205
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G V+A+ G D IA+D R VS + KIF + + +G+ G D V +R
Sbjct: 7 NGSAVVAMKGKDCVAIAADRRFGIQAQTVSMDFQKIFEMGPRLYLGLPGLATDVQTVSNR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L+ +N + + + M+S LLYERR PY+V+ ++ G++ T + + S D
Sbjct: 67 LKFRLNLYTLRENRKIKPKTFMSMVSNLLYERRFGPYFVEPIIAGLEPDTYEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C V + + GTS++ + L P + + + ++ AL
Sbjct: 127 IG-CPMVPEDFVVAGTSSEQLYGMCESLWLPDMNSEELFETVSQAL 171
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I D ++ +D R+S ++S KIF++ + A+ +G + D L +V
Sbjct: 8 KGTTTVGIVCKDGVVLTADRRASLGNMVISKGVTKIFQVDDHLALAGAGAVGDILSLVRA 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE G+ +S A + S +L R+ PY+ L+ G D K +YS D
Sbjct: 68 LRAESKLYRAKVGKEMSTKALATLTSNILSGRKYLPYFGWFLIGGYD--EKPSLYSIDMA 125
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
G + Y G+ +F + S L + Y + + + +A++ + +K
Sbjct: 126 GGITEDKYVSAGSGMEF---AYSILDNEYSEKITLNNGVKLAIKAINAAIK 173
>gi|388583046|gb|EIM23349.1| N-terminal nucleophile aminohydrolase [Wallemia sebi CBS 633.66]
Length = 205
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G IA D R + ++ N K+F + + VG+ G +D L +
Sbjct: 7 NGGSVVAMRGKKCVAIAGDLRLGNRNMSLAANFEKVFPITQKLFVGLPGLASDVLTLRDT 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ N +G+ + A ++S LYERR PY+V+ ++ G+D G+ + + D
Sbjct: 67 FRFRTNMYKLKEGREIEPNTFAHLVSSTLYERRWSPYFVEPVVAGLDPNNGEPFIAATDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ M L P D + I+ L
Sbjct: 127 IG-CLNFAKDFVVSGTASDKMFGMAESLWEPDLEAEDLFETISQTL 171
>gi|58395630|ref|XP_321394.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|347966404|ref|XP_003435908.1| AGAP001697-PB [Anopheles gambiae str. PEST]
gi|55233656|gb|EAA00889.2| AGAP001697-PA [Anopheles gambiae str. PEST]
gi|333470074|gb|EGK97505.1| AGAP001697-PB [Anopheles gambiae str. PEST]
Length = 205
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IA+D R ++ + K+F + +G+ G D L V R
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVYQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ A MLS LYE+R PY+++ ++ G+D T + + + D
Sbjct: 67 LLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPKTYEPFICNMDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT A+ + L P +VI+ AL
Sbjct: 127 IG-CPNLPNDFVVAGTCAEQLYGMCETLWKPDLESDSLFEVISQAL 171
>gi|296242989|ref|YP_003650476.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095573|gb|ADG91524.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 202
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT + + + ++AS+ R + +G ++S++ K++ + VG +G M D + L+
Sbjct: 6 GTAIGVKTREGVVLASEKRLTYDGFVLSSSVKKVYAITPHVGVGFAGLMGDVNILKRMLE 65
Query: 74 AEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
E G+ + + G A+MLS++LY ++ P ++++ G D G +Y DPVG
Sbjct: 66 MEAKYYELQHGREIRVRGLAKMLSVILYSYKLAPMLTEIVVGGYDDNGP-QLYILDPVGS 124
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
+ Y G+ A+ ++ Y+ Y + + + +E + V++
Sbjct: 125 LIEEKYAALGSGAQL---ALGYIEPRYNPDISLEEAEKLVVEAVKTVIE 170
>gi|256391621|ref|YP_003113185.1| 20S proteasome subunits A and B [Catenulispora acidiphila DSM
44928]
gi|302595822|sp|C7PVV2.1|PSB_CATAD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|256357847|gb|ACU71344.1| 20S proteasome A and B subunits [Catenulispora acidiphila DSM
44928]
Length = 288
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T+++IA P L+A D R++ I + K+F +AVGI+G+ ++EVV
Sbjct: 59 HGTTIVSIAFPGGVLLAGDRRATMGNFIAQRDIEKVFPADEFSAVGIAGSAGLAVEVVRL 118
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYY---VQVLLVGID-GTGKGGVYS 127
Q E+ + +G LS G A L+ ++ V L G D TG+G ++S
Sbjct: 119 FQLELEHYEKIEGVTLSTDGKANRLATMIRGNLAMAMQGLAVVPLFAGYDEETGQGRIFS 178
Query: 128 YDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ + G+ + F ++ L P +F D A++ L
Sbjct: 179 YDVTGGMYEEHDFYSVGSGSMFARGALKKLFRP---DFTAEDAAVAAVQAL 226
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 7 EHYVQH--GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
+HY ++ G T + + D ++A+D R++ I K++++ + A+ I+G++ D
Sbjct: 5 DHYKEYMKGTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGD 64
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ +V + AE G + A +LS +L+ R FP+ Q+++ G D
Sbjct: 65 AQSLVRMISAETKIYKMRTGNNMPPHSCATLLSNILHGNRHFPFLTQLIIGGYDNLHGPK 124
Query: 125 VYSYDPVG 132
++S DPVG
Sbjct: 125 LFSLDPVG 132
>gi|145514570|ref|XP_001443190.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410568|emb|CAK75793.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 81/164 (49%), Gaps = 2/164 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+++ + G + +A D R + ++ N K+F++ + + +SG +D +
Sbjct: 8 NGGSIVGMKGKNCIAMACDRRFGQQMSTITTNYQKVFKIQDNILLALSGLNSDIHTFYAL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++ EIN + + + A +++ LYERR P++V ++ G++ GK + +YD +
Sbjct: 68 MEKEINLYNLKENRKMKPSTFANLVASSLYERRFGPFFVTPIVAGLE-NGKPILATYDSI 126
Query: 132 GHCEKV-AYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G + +++ GT ++ + P S + +VI +L
Sbjct: 127 GCKSDLDDFQVGGTGGNYIYGACEAFFKPDLSPEELEEVIGQSL 170
>gi|432883021|ref|XP_004074194.1| PREDICTED: proteasome subunit beta type-2-like [Oryzias latipes]
Length = 199
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPDF L+A+D ++S+ + ++ K+F+L + + G D+++ +Q
Sbjct: 4 LIGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D G++ D +
Sbjct: 64 VQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNLLLAGYDDADGPGLFYMDYLSS 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + +++ +EEL
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRDYKPDLTREEAMNILRKCVEELN 168
>gi|68069127|ref|XP_676474.1| beta3 proteasome subunit [Plasmodium berghei strain ANKA]
gi|56496189|emb|CAH97578.1| beta3 proteasome subunit, putative [Plasmodium berghei]
Length = 204
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 19 IAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEIN 77
+ G IA D R SN T VS N KIF++ + VG+SG D + L+ +N
Sbjct: 1 MTGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 78 RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG------IDGTG-KGGVY---- 126
+ +++ + MLS +LY R PY+V ++VG ID G K VY
Sbjct: 61 LYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKTNVYEPYL 120
Query: 127 -SYDPVG-HCEKVAYRLHGTS 145
+YD +G CE + ++G S
Sbjct: 121 NAYDLIGAKCETSDFVVNGVS 141
>gi|358378900|gb|EHK16581.1| hypothetical protein TRIVIDRAFT_183933 [Trichoderma virens Gv29-8]
Length = 205
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R +SNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTISNNFPKIFQY-GDVFLGLTGLATDVSTVSDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR PY+V ++ G+D TGK + +D
Sbjct: 67 FRYKVNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT+++ + L P
Sbjct: 127 IG-CIDFAKDFIVSGTASEQLFGMCEGLWEP 156
>gi|302595912|sp|Q2J9Q3.2|PSB_FRASC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
Length = 274
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A+A P ++A D R++ I + K+ + + VG +G E++
Sbjct: 49 VAHGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDYSCVGYAGTAGVGAELI 108
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKG 123
Q E+ + +G LSL A L+ ++ + P +Q L V G D TGKG
Sbjct: 109 RLFQVELEHYEKIEGSTLSLDAKANRLAAMV--KGNLPMALQGLAVVPLFAGYDLDTGKG 166
Query: 124 GVYSYD-PVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++SYD E+ Y G+ + F S L + S+ D + +++E L
Sbjct: 167 RIFSYDIAAAKSEERTYESIGSGSVFAKGS---LKKRFRSDLSQDDAVRISVEAL 218
>gi|451333228|ref|ZP_21903814.1| Proteasome subunit beta [Amycolatopsis azurea DSM 43854]
gi|449424034|gb|EMD29336.1| Proteasome subunit beta [Amycolatopsis azurea DSM 43854]
Length = 278
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 13/178 (7%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A+ LIA D R++S I S + K+ +AVGI+G+ ++E+V
Sbjct: 48 VPHGTTIVAVKFAGGVLIAGDRRATSGNLIASRDMEKVHVADEYSAVGIAGSAGLAIEMV 107
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTG 121
E+ + +G LSL G L+ L+ + P +V L D
Sbjct: 108 RLYAVELAHYEKIEGVSLSLDGKTNKLAGLVKSNLEMAMAGLAVLPLFVGYDLDAEDAKH 167
Query: 122 KGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G + SYD G + E Y G+ + F S+ L Y+ + D I A+E L
Sbjct: 168 AGRIVSYDATGGRYEESAGYHAIGSGSLFAKGSLKKL---YDPDADAEAAIRTAVEAL 222
>gi|52548238|gb|AAU82106.1| 20S proteasome beta 4 subunit [Triticum aestivum]
Length = 213
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
V+ + G DFA++A+DT + + + ++ KI L + +G SG D ++ +Q
Sbjct: 3 CVIGVVGSDFAVVAADTSAVQSILVHKTDEDKIMLLDSHKLMGASGEPGDRVQFTEFIQK 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLS-LLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
++ PLS TA L R PY V ++L G D +Y D +
Sbjct: 63 NLHLYQFRNNMPLSTAATANFTRGELATALRKNPYSVNIILAGFDKDAGASMYYIDYIAT 122
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K+ G + F L+ M L P + + D++ ++E+
Sbjct: 123 LHKIDKGAFGYGSYFCLSLMDKLYRPDMTVEEAVDLVDKCIKEI 166
>gi|344299526|gb|EGW29879.1| hypothetical protein SPAPADRAFT_63501 [Spathaspora passalidarum
NRRL Y-27907]
Length = 206
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + + +GG+ +A+ G D IASD R + VSNN KIF ++ +G++G D
Sbjct: 1 MSDPFSINGGSAVAMVGKDCIAIASDLRLGNQSLGVSNNFEKIFGFGDKCFLGLTGLATD 60
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI-DGTGKG 123
L + + + N + + + A ++S LYERR PY+V ++ G+ K
Sbjct: 61 VLTLKETFRFKTNLYKLREERSIEPETLANLVSSTLYERRFGPYFVSPIVAGLGHKDNKP 120
Query: 124 GVYSYDPVG 132
+ +D +G
Sbjct: 121 FICGFDSIG 129
>gi|300707553|ref|XP_002995980.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
gi|239605230|gb|EEQ82309.1| hypothetical protein NCER_101004 [Nosema ceranae BRL01]
Length = 205
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 61/121 (50%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+++A+ G I +D R + V N K++ L N+ G +G ++D+ + +
Sbjct: 8 YGGSILAMIGKSSVSIVTDKRLGAGPISVGKNFTKVYTLNNRLFFGFTGLVSDAEILYKK 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++ N + + + + ++S +LY++R+ PYYV ++ GI K S D +
Sbjct: 68 IRKNYNLFVQDNKRDMEPSELSNLISFILYQKRLQPYYVSTIVCGITSDNKPYASSMDCI 127
Query: 132 G 132
G
Sbjct: 128 G 128
>gi|29726328|pdb|1J2Q|H Chain H, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726329|pdb|1J2Q|I Chain I, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726330|pdb|1J2Q|J Chain J, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726331|pdb|1J2Q|K Chain K, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726332|pdb|1J2Q|L Chain L, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726333|pdb|1J2Q|M Chain M, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
gi|29726334|pdb|1J2Q|N Chain N, 20s Proteasome In Complex With Calpain-inhibitor I From
Archaeoglobus Fulgidus
Length = 202
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
T + + D ++A++ R++ I S KI+++ ++ A+ +G++ D+ + ++
Sbjct: 2 TTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKI 61
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
E N + + ++ A + S LL R FPY VQ+L+ GID GK +YS DP+G
Sbjct: 62 EANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGK-SIYSIDPIG 118
>gi|67528502|ref|XP_662053.1| hypothetical protein AN4449.2 [Aspergillus nidulans FGSC A4]
gi|40741024|gb|EAA60214.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
gi|259482734|tpe|CBF77496.1| TPA: proteasome component Pup3, putative (AFU_orthologue;
AFUA_4G07420) [Aspergillus nidulans FGSC A4]
Length = 192
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF T +G++G D V + ++N
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYAPGTYLGLTGLATDVSTVSDLFRLKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDPVGHCEKV 137
+ + ++ A ++S LYERR Y+V ++ GI+ TGK + +D +G C
Sbjct: 61 YRLREERHIAPQTLANLVSSTLYERRFGAYFVSPVIAGINNTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + + L P S D + I+ AL
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDMSPEDLFETISQAL 158
>gi|452980318|gb|EME80079.1| hypothetical protein MYCFIDRAFT_189753 [Pseudocercospora fijiensis
CIRAD86]
Length = 192
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF T +G++G D V + ++N
Sbjct: 1 MVGKDCVAIACDLRLGLQALTVSNNFPKIFNYSQSTFLGLTGLATDVSTVSELFRYKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPVGHCEKV 137
+ + +S A ++S LYERR P++V ++ GI+ TGK + +D +G C
Sbjct: 61 YRLREEREISPQTFANLVSSSLYERRFGPWFVSPVVAGINQTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + + L P D + ++ AL
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLEPEDLFETMSQAL 158
>gi|392373824|ref|YP_003205657.1| proteasome A-type and B-type [Candidatus Methylomirabilis oxyfera]
gi|258591517|emb|CBE67818.1| putative proteasome A-type and B-type [Candidatus Methylomirabilis
oxyfera]
Length = 283
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ D ALIA D +++ I S K+++ +A+ I+G +E+
Sbjct: 49 HGTTILAMRFRDGALIAGDRQATEGYQISSRRIEKVYKADQYSAIAIAGVAGPCIEMAKL 108
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLL-----VGID-GTGKGGV 125
+ E+ + +G LSL G A LS ++ + P +Q L+ VG D +G G +
Sbjct: 109 FEVELTHYEKLEGMSLSLEGKANKLSQMV--KANLPMAMQGLVVIPIFVGYDVRSGDGKI 166
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ YD G E+ Y G+ K ++M L Y + I + LE L
Sbjct: 167 FKYDVTGGRYEETDYYATGSGGKDARSTMKKL---YRDRMTEDEAIAVGLEAL 216
>gi|167522269|ref|XP_001745472.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775821|gb|EDQ89443.1| predicted protein [Monosiga brevicollis MX1]
Length = 211
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G IA+D R + V+ + K+F++ VG+ G D R
Sbjct: 14 NGSAMVAMTGKGCIAIAADRRLGAQAQTVATDFQKLFQMGPTLFVGLPGLATDVQTFSQR 73
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L ++ + + + ++S +LYE+R PY+++ L+ G+D G+ V S D +
Sbjct: 74 LTFKLKLYKLREERDIEPKALTNLISSMLYEKRFGPYFIEPLIAGLDKDGQPYVASTDVI 133
Query: 132 GHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G C E + + GTS+ + L P + +V++ AL
Sbjct: 134 G-CPMETTDFVVGGTSSDQLFGMCESLYKPNMEPDELFEVVSQAL 177
>gi|429329532|gb|AFZ81291.1| proteasome subunit beta type 3, putative [Babesia equi]
Length = 217
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 15/177 (8%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTI-VSNNQLKIFRLPNQTAVGISGNMADSLEVV- 69
+GG V+A+ G IA D R N I + N K FR+ +++ SG +A ++ +
Sbjct: 8 NGGAVVAMVGDQCVAIACDKRLGMNQQITIGTNFPKAFRVTDKSFFAASG-LATDVQTMY 66
Query: 70 -----------SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
++ +N + +S+ + M+S +LY RR P++V+ ++ G+D
Sbjct: 67 VNHPCTPCCRKEEIEFRVNMYEASSESKMSINKLSNMVSTMLYSRRFSPWFVEAVVAGLD 126
Query: 119 GTGKGGVYSYDPVGH-CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
K + +D +G C + + GT A+ + L P + ++++ L
Sbjct: 127 AQNKPFISCFDLIGAPCNPDDFVVAGTCAEQLYGICEALFKPNAGPDELFEIVSQCL 183
>gi|320590790|gb|EFX03233.1| proteasome component [Grosmannia clavigera kw1407]
Length = 206
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN K+F+ + +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGMQALTVSNNFPKVFQYGDNVFLGLTGLATDVNTVSDL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR P++V ++ G++ TG+ + +D
Sbjct: 68 FRYKVNLYRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLEPKTGQPFICGFDS 127
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT+++ + L P
Sbjct: 128 IG-CIDFARDFIVSGTASEQLFGMCESLWEP 157
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 7/173 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + I ++AS+ R++ I + KI+++ + + +G + D+ ++
Sbjct: 9 KGTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAPRIGLTTAGGVGDAQQLARL 68
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ E N +G+ +S+ + +LS +L+ R+FP+YVQ+L+ G+D TG ++S D V
Sbjct: 69 MTVEANLYEIRRGKRISVQAASTLLSNILHGNRMFPFYVQLLIGGVDETGP-VLFSVDAV 127
Query: 132 GHCEKVAYRLHGTSAKFMLASMSY--LLSPYESEFDYTDVITMALEELTPVVK 182
G K G A + M+Y L Y D I +A+ L +K
Sbjct: 128 GGTGKE----DGIVATGSGSPMAYGVLEDRYTLGMDERSAIELAIRALRSAIK 176
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLE 67
V G T + I + ++A++ R S +S K+F + ++ A+ +G +AD +L
Sbjct: 5 VSIGATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLA 64
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ +L A+ E K +P S+ A++LS++++ RR P++ +VL+ GID G +
Sbjct: 65 KILKLNAK-AYELEMKRKP-SVHAMAKLLSVVMFSRRFMPFFAEVLVGGIDDEGPH-LIV 121
Query: 128 YDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
DP+G + Y GT AK +A + + Y+ + D +A++ L
Sbjct: 122 MDPLGSLIEDNYAALGTGAKLAIAIID---ASYKPDMSLQDAKKLAVQAL 168
>gi|119501054|ref|XP_001267284.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
gi|119415449|gb|EAW25387.1| proteasome component Pup3, putative [Neosartorya fischeri NRRL 181]
Length = 192
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+ G D IA D R VSNN KIF T +G++G D V + ++N
Sbjct: 1 MVGKDCVAIACDLRLGMQALTVSNNFPKIFNYGPSTYLGLTGLATDVNTVSDLFRYKVNM 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDPVGHCEKV 137
+ + ++ A ++S LYERR P++V ++ G++ TGK + +D +G C
Sbjct: 61 YRLREERNIAPQTLANLVSSSLYERRFGPFFVSPVIAGVNSTTGKPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + + L P S D + I+ AL
Sbjct: 120 AKDFIVSGTASDQLFGTCEGLWEPDLSPEDLFETISQAL 158
>gi|209734746|gb|ACI68242.1| Proteasome subunit beta type-2 [Salmo salar]
Length = 170
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++ + + +Q K+F+L ++ + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNVAAHSIVKMKQDQDKMFKLSDKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY+V +LL G D T G+Y D +
Sbjct: 64 IQLYKMRNGYELSPTAAANFTRKNLADYLRSRTPYHVNLLLAGFDETDGPGLYYMDHLSA 123
Query: 134 CEKVAYRLHGTSA 146
K + HG A
Sbjct: 124 LAKAPFAAHGHGA 136
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLEVVS 70
G T + I D ++A++ R + +S++ K++ + ++ A+ +G +AD ++ +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRITYGFYSLSSSGKKVYVVNDRMALASAGVIADMQTIAKIL 67
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
R+ A++ E++ +P S+ A++LS++++ RRI P+ +VL+ G D G ++ DP
Sbjct: 68 RVNAKMYE-LESRRKP-SIAAMAKLLSVIMFNRRIMPFIAEVLVGGYDEEGP-HIFVLDP 124
Query: 131 VGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
VG + Y GT AK ++S L + Y + D + +A+ +
Sbjct: 125 VGSLIEDDYAALGTGAKM---AISILDANYSKDVDVSGARKLAINAI 168
>gi|225706970|gb|ACO09331.1| Proteasome subunit beta type 2 [Osmerus mordax]
Length = 199
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++S+ + ++ K+F+L + + G D+++ +Q
Sbjct: 4 LIGIQGTDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D + G++ D +
Sbjct: 64 VQLYKMRNGYELSPSAAANFTRKNLADYLRSRTPYHVNLLLAGYDESDGPGLFYMDHLSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ + P + + D++ +EEL
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYRPELTRDEAVDLLKKCVEELN 168
>gi|295839802|ref|ZP_06826735.1| proteasome, beta subunit [Streptomyces sp. SPB74]
gi|197697742|gb|EDY44675.1| proteasome, beta subunit [Streptomyces sp. SPB74]
Length = 280
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+A ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAVGIAGTAGLAVEMVKL 110
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A L+ ++ R +Q L V G D G G +
Sbjct: 111 FQLELEHFEKVEGATLSLEGKANRLATMI--RGNLGMAMQGLAVVPLFAGYDVDRGTGRI 168
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+SYD G E+ Y G+ + F ++ L P S D + + AL
Sbjct: 169 FSYDVAGGRSEEYGYASTGSGSVFARGALKKLYRPGLSADDASVLAIQAL 218
>gi|325003202|ref|ZP_08124314.1| 20S proteasome beta-type subunit [Pseudonocardia sp. P1]
Length = 263
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 10/173 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A D L+A D R++S I + +K+ + + +A G +G++ +L ++
Sbjct: 38 HGTTIIAFTWADGVLLAGDRRATSGNVIAQKDLVKVMAIDDTSAAGFAGSVGHALLMLKM 97
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID--GTGKGGVY 126
AE+ + + +G P+S G LS ++ E + + L VG D +
Sbjct: 98 FAAEVEQYEKVEGSPISQDGKIRRLSTVVRENLGAAMQGFVALPLFVGYDPADADPARIV 157
Query: 127 SYDPVGHC--EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++DP G + Y G+ + F AS+ L P + D + I++A+ L
Sbjct: 158 TFDPSGSIARNRSGYTSIGSGSYFAEASLKKLHRP---DTDRSGAISLAVNAL 207
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 5 MLEHYVQH--GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNM 62
M E Y + G T + + ++A++ R++ I S K++++ ++ + I+G +
Sbjct: 1 MPEQYQESMTGTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGV 60
Query: 63 ADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGK 122
D+ ++ + E N + + +++ + +LS L + R FPYYVQ+L+ GID G
Sbjct: 61 GDAQQLARIITVECNLYQIRRSREITVGAASTLLSNYLNQNRYFPYYVQLLVGGIDDHGP 120
Query: 123 GGVYSYDPVGHCEK 136
VYS D +G K
Sbjct: 121 -SVYSVDAMGGATK 133
>gi|393233198|gb|EJD40772.1| 20S proteasome subunit beta 3 [Auricularia delicata TFB-10046 SS5]
Length = 207
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G + IASD R + V+ N K+F + ++ +G+ G D + R
Sbjct: 7 NGGSVIAMVGKNCVAIASDLRLGNQALTVATNFEKVFPVTDRIYLGLPGLATDVATLRER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
+ +N + + + A ++S LYERR PY+++ ++ G+ +G
Sbjct: 67 FRYRVNMYTIKEEREIEPETFAHLVSSTLYERRFGPYFIEPVIAGLTSPARG 118
>gi|395768474|ref|ZP_10448989.1| 20S proteasome subunit beta [Streptomyces acidiscabies 84-104]
Length = 281
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFQGGVILAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDMNRAKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ + G+ + F +M L +E + T ++ AL
Sbjct: 172 YDVTGGRSEEQNFAAVGSGSIFARGAMKKLFHSGLTESEATTLVVQAL 219
>gi|284031156|ref|YP_003381087.1| 20S proteasome subunits A and B [Kribbella flavida DSM 17836]
gi|302595740|sp|D2Q4H4.1|PSB_KRIFD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|283810449|gb|ADB32288.1| 20S proteasome A and B subunits [Kribbella flavida DSM 17836]
Length = 279
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 12/179 (6%)
Query: 6 LEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADS 65
L V HG T++A ++A D R++ I + K+F + VGI+G+ +
Sbjct: 44 LSKDVPHGTTIVAATFDGGVVMAGDRRATMGNIIAQRDIEKVFPADEYSCVGIAGSAGLA 103
Query: 66 LEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GIDGT 120
+E+V Q E+ + +G LSL G A LS L+ R +Q L V G D
Sbjct: 104 IEMVRLFQVELEHYEKLEGTTLSLDGKANRLSALI--RGNLAMAMQGLAVVPLFAGYDHD 161
Query: 121 GKGG-VYSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
GG ++SYDP G E+ A+ G+ + F S+ L Y + +T ++ L
Sbjct: 162 ISGGRIFSYDPTGGRYEEQAFHSVGSGSLFARGSLKKL---YRESMSAAECVTATIQAL 217
>gi|405946999|gb|EKC17751.1| Proteasome subunit beta type-1 [Crassostrea gigas]
Length = 128
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 95 MLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGHCEKVAYRLHGTSAKFM 149
ML+ LY RR FPYY +L G+D G G VYSYDPVG+ E+V + G+ +
Sbjct: 1 MLANTLYGRRFFPYYTWNILAGLDENGVGCVYSYDPVGNYERVRVNVTGSGESLI 55
>gi|350536231|ref|NP_001232468.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
gi|197128389|gb|ACH44887.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
gi|197128390|gb|ACH44888.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
Length = 205
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G IA+D R VS + +IF + + +G++G D V R
Sbjct: 7 NGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLGLAGLATDVQSVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG-KGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY + ++ G+D + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYAEPVIAGLDPVSLEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + L GT ++ M L P
Sbjct: 127 IG-CPMVTQDFVLSGTCSEQMYGMCESLWEP 156
>gi|86741318|ref|YP_481718.1| proteasome subunit beta [Frankia sp. CcI3]
gi|86568180|gb|ABD11989.1| proteasome endopeptidase complex, beta component. Threonine
peptidase. MEROPS family T01B [Frankia sp. CcI3]
Length = 304
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A+A P ++A D R++ I + K+ + + VG +G E++
Sbjct: 79 VAHGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDYSCVGYAGTAGVGAELI 138
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKG 123
Q E+ + +G LSL A L+ ++ + P +Q L V G D TGKG
Sbjct: 139 RLFQVELEHYEKIEGSTLSLDAKANRLAAMV--KGNLPMALQGLAVVPLFAGYDLDTGKG 196
Query: 124 GVYSYD-PVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++SYD E+ Y G+ + F S L + S+ D + +++E L
Sbjct: 197 RIFSYDIAAAKSEERTYESIGSGSVFAKGS---LKKRFRSDLSQDDAVRISVEAL 248
>gi|324524031|gb|ADY48349.1| Proteasome subunit beta type-3 [Ascaris suum]
Length = 205
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GGT++A+AG + IA+D R T ++ N K+ +L ++ +G+ G +D+ V+ +
Sbjct: 7 NGGTILAMAGNECVCIATDLRLGEQMTTIATNVKKVHKLGDRVYIGLGGFYSDAKTVLDK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ N + + + A M+S LLY+ R Y + L+ G+D T K + D
Sbjct: 67 ILFRKNLYELRENRKIKPEVAATMISNLLYQHRFGGYLTEPLVAGLDPVTNKAYICGMDT 126
Query: 131 VG 132
+G
Sbjct: 127 IG 128
>gi|296425517|ref|XP_002842287.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638550|emb|CAZ86478.1| unnamed protein product [Tuber melanosporum]
Length = 593
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G D IA D R VSN+ KIF +G++G D V
Sbjct: 396 NGGAVVAMVGKDCVAIACDLRLGMQALTVSNDFPKIFNY-GDVYLGLTGLATDVTSVSEL 454
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ ++N + + + A ++S LYE+R PY+V ++ GI+ +GK + +D
Sbjct: 455 FRYKVNMYRLREERDIEPQTMANLVSSSLYEKRFGPYFVSPVIAGINQHSGKPFICGFDS 514
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT++ + + L P D + I+ AL
Sbjct: 515 IG-CINFAEDFIVSGTASDQLFGTCEGLWEPDLEPEDLFETISQAL 559
>gi|70944654|ref|XP_742236.1| beta3 proteasome subunit [Plasmodium chabaudi chabaudi]
gi|56521097|emb|CAH75996.1| beta3 proteasome subunit, putative [Plasmodium chabaudi chabaudi]
Length = 204
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 19 IAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEIN 77
++G IA D R SN T VS N KIF++ + VG+SG D + L+ +N
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 78 RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG------IDGTG-KGGVY---- 126
+ +++ + MLS +LY R PY+V ++VG +D G K VY
Sbjct: 61 LYQIRQETEMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVTTQVDENGNKTNVYEPYL 120
Query: 127 -SYDPVG-HCEKVAYRLHGTS 145
+YD +G CE + ++G S
Sbjct: 121 NAYDLIGAKCETNDFVVNGVS 141
>gi|254578212|ref|XP_002495092.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
gi|238937982|emb|CAR26159.1| ZYRO0B03146p [Zygosaccharomyces rouxii]
Length = 205
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF+ +G++G D +
Sbjct: 8 NGGVCVAMTGKDCVAIACDLRLGMQSLGVSNNFEKIFKY-GHVFLGLTGLATDVTTLSET 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + +P+ +++S LYERR P++V ++ GI+ TGK + +D
Sbjct: 67 FRYKTNLYNLKEDRPIEPETFTQLVSSSLYERRFGPFFVGPIVAGINSKTGKPFIAGFDM 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ +L
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPDLEPEDLFETISQSL 171
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD--SLE 67
VQ G T + I ++A++ R S +S++ K+F + ++ A+ +G +AD +L
Sbjct: 5 VQIGATAVGIKTAGGVVLAAEKRVSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALA 64
Query: 68 VVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYS 127
+ +L A+ + E K +P S+ A++LS++++ RR P++ +VL+ G+D G +
Sbjct: 65 KILKLNAK-SYELEMKKKP-SVHAMAKLLSVVMFSRRFMPFFAEVLVGGVDEEGP-HLIV 121
Query: 128 YDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
DP+G + Y GT AK A + Y ++ + +A++ L ++
Sbjct: 122 MDPLGSLIEDNYAALGTGAKLAAAVLD---GNYRNDMSIEEAKKLAVQALKAAIE 173
>gi|402077481|gb|EJT72830.1| proteasome component PUP3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF+ +G++G D V
Sbjct: 8 NGGAAVAMVGKDCVAIACDLRLGMQALTVSNNFPKIFQY-GDVFLGLTGLATDVSTVSDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ ++N + + ++ A ++S LYERR PY+V ++ G+D T + + +D
Sbjct: 67 FRYKVNMYRLREERNIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTSQPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C A + + GT+++ + L P D + I+ AL
Sbjct: 127 IG-CIDFAKDFIVSGTASEQLFGMCESLWEPNLEPEDLFETISQAL 171
>gi|390349452|ref|XP_003727222.1| PREDICTED: proteasome subunit beta type-2-like [Strongylocentrotus
purpuratus]
Length = 201
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPD+ L+ASD + + + ++Q K+F L ++ + +G D+++ +Q
Sbjct: 4 LLGIQGPDYVLLASDMNAGRSVFVFKHDQEKMFPLSSKLLMLCAGESGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L + R PY V +LL G D T ++ D +G
Sbjct: 64 IQLYKIRNGYELSPKAAANFTRKNLADFLRSKTPYQVNLLLAGHDETDGPCLFYMDYLGS 123
Query: 134 CEKVAYRLHGTSAKFMLA 151
++V + HG + F L+
Sbjct: 124 LQQVPFAAHGYGSYFTLS 141
>gi|354611438|ref|ZP_09029394.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
gi|353196258|gb|EHB61760.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
Length = 243
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 23 DFALIASDTRSSSNGTIVSN-NQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAE 81
D ++ASD R+S G ++SN N K+ + A+ ISG++ S + L+AE N
Sbjct: 58 DGVVMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGSQAFIRSLRAEANLYEA 117
Query: 82 AKGQPLSLPGTAEMLSLLLYERRIFPYYVQV-LLVGIDGTGKGGVYSYDPVGHCEKVAYR 140
+G+ +S+ + M S LL R P+++ V +L G+D G VYS DP G Y
Sbjct: 118 RRGEYMSINALSTMASNLL---RGGPFFLVVPILGGVDEEG-AHVYSLDPGGSSMSDKYT 173
Query: 141 LHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
G+ M Y L E E YTD +TM E
Sbjct: 174 AQGS-------GMPYALGVLEQE--YTDDLTMEEAE 200
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 39 IVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSL 98
I S KI+++ ++ + +G + D+ +V +Q E +G+P+++ GT +LS
Sbjct: 5 IASTTAQKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYNMQRGEPMTVRGTTSLLSN 64
Query: 99 LLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
+L RR FP+ VQ+LL G+D G ++S D +G
Sbjct: 65 VLASRRYFPFMVQLLLGGVDKKGP-QLFSLDALG 97
>gi|383854573|ref|XP_003702795.1| PREDICTED: proteasome subunit beta type-3-like [Megachile
rotundata]
Length = 205
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG ++A+ G + IA+D R ++ + KIF + + + G D+ V+ R
Sbjct: 7 NGGAIIAMRGKNCVAIAADRRFGIQAQTITCDFQKIFEMGPHLYMSLPGLATDTQTVMER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
L+ +N + + + A M+S LLYERR PY+VQ ++ G+
Sbjct: 67 LRFRLNLYELKENRKIHPKTFASMVSNLLYERRFGPYFVQPIIAGL 112
>gi|118468051|ref|YP_888185.1| proteasome subunit beta [Mycobacterium smegmatis str. MC2 155]
gi|441211118|ref|ZP_20974834.1| proteasome, beta subunit [Mycobacterium smegmatis MKD8]
gi|118169338|gb|ABK70234.1| proteasome beta subunit [Mycobacterium smegmatis str. MC2 155]
gi|440626365|gb|ELQ88195.1| proteasome, beta subunit [Mycobacterium smegmatis MKD8]
Length = 280
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A+ P LIA D RS+ I + K++ + TA GI+G A ++E
Sbjct: 36 VPHGTTIVALKYPGGVLIAGDRRSTQGNMIAGRDVQKVYITDDYTATGIAGTAAIAVEFA 95
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-----GTG 121
E+ + +G PL+ G L++++ + + LLVG D G
Sbjct: 96 RLYAVELEHYEKLEGVPLTFRGKVNRLAIMVRGNLGAALQGFVALPLLVGYDLDDPHPEG 155
Query: 122 KGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G + S+D G + E+ Y+ G+ + F +SM L Y D + +A+E L
Sbjct: 156 AGRIVSFDAAGGWNIEEEGYQSVGSGSIFAKSSMKKL---YSQVSDADSALKVAVEAL 210
>gi|82704967|ref|XP_726772.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482323|gb|EAA18337.1| 7006-8626 [Plasmodium yoelii yoelii]
Length = 204
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 19 IAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEIN 77
++G IA D R SN T VS N KIF++ + VG+SG D + L+ +N
Sbjct: 1 MSGSQCVAIACDLRLGSNSFTTVSTNFTKIFKINDHIYVGLSGLATDIQSLYELLRYRVN 60
Query: 78 RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG------IDGTG-KGGVY---- 126
+ +++ + MLS +LY R PY+V ++VG ID G K VY
Sbjct: 61 LYQIRQETDMNIDCFSNMLSNILYSNRFSPYFVNPIVVGFKVNTHIDENGNKINVYEPYL 120
Query: 127 -SYDPVG-HCEKVAYRLHGTS 145
+YD +G CE + ++G S
Sbjct: 121 NAYDLIGAKCETNDFVVNGVS 141
>gi|291301921|ref|YP_003513199.1| 20S proteasome subunits A/B [Stackebrandtia nassauensis DSM 44728]
gi|302595786|sp|D3Q557.1|PSB_STANL RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|290571141|gb|ADD44106.1| 20S proteasome A and B subunits [Stackebrandtia nassauensis DSM
44728]
Length = 279
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ + ++A D R++ I + K+F + +GI+G +E++
Sbjct: 52 HGTTIVALRCNEGVVMAGDRRATQGNMISLRDIQKVFPADAYSLIGIAGTAGLGVEMIRL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
QAE+ + +G LSL G A L+ ++ + P + D G
Sbjct: 112 FQAELEHFEKLEGNALSLHGKANKLANMIRGNLGIAMQGLAVLPLFAGFDTDAPDAASAG 171
Query: 124 GVYSYDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++SYD VG E+ Y G+ + F + S L ++SE D T+ +A+E L
Sbjct: 172 RIFSYDVVGGIYEEREYDAIGSGSIF---AKSALKKRFQSEVDATEATRLAIEAL 223
>gi|197128391|gb|ACH44889.1| putative proteasome subunit beta type 3 [Taeniopygia guttata]
Length = 205
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G IA+D R VS + +IF + + +G++G D V R
Sbjct: 7 NGGAVLAMRGRGCVAIAADRRFGIQAQTVSTDCQRIFPMGQRLLLGLAGLATDVQSVAQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTG-KGGVYSYDP 130
L+ +N +G+ + M+S LLYERR PYY + ++ G+D + + S D
Sbjct: 67 LKFRLNLYELKEGRQIKPQTFMSMVSNLLYERRFGPYYAEPVIAGLDPVSLEPFICSLDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C V + L GT ++ M L P
Sbjct: 127 IG-CPMVTQDFVLSGTCSEQMYGMCESLWEP 156
>gi|399988208|ref|YP_006568558.1| proteasome (Beta subunit) PrcB [Mycobacterium smegmatis str. MC2
155]
gi|259535829|sp|A0QZ47.2|PSB_MYCS2 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|2293463|gb|AAC45614.1| proteasome beta subunit [Mycobacterium smegmatis str. MC2 155]
gi|399232770|gb|AFP40263.1| Proteasome (Beta subunit) PrcB [Mycobacterium smegmatis str. MC2
155]
Length = 303
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
V HG T++A+ P LIA D RS+ I + K++ + TA GI+G A ++E
Sbjct: 59 VPHGTTIVALKYPGGVLIAGDRRSTQGNMIAGRDVQKVYITDDYTATGIAGTAAIAVEFA 118
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-----GTG 121
E+ + +G PL+ G L++++ + + LLVG D G
Sbjct: 119 RLYAVELEHYEKLEGVPLTFRGKVNRLAIMVRGNLGAALQGFVALPLLVGYDLDDPHPEG 178
Query: 122 KGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G + S+D G + E+ Y+ G+ + F +SM L Y D + +A+E L
Sbjct: 179 AGRIVSFDAAGGWNIEEEGYQSVGSGSIFAKSSMKKL---YSQVSDADSALKVAVEAL 233
>gi|385805286|ref|YP_005841684.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
gi|383795149|gb|AFH42232.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
Length = 199
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M+E + G TV+ + + A+IA + R + I+S+ K++ + + G +G M D
Sbjct: 1 MVETF--QGATVVGLKFSNGAVIAGEERMTYRTFIMSSQAKKVYLINERLGAGTAGLMGD 58
Query: 65 SLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGG 124
+ ++ + EI +S A++LS +LY R FP Y + +L GID K
Sbjct: 59 TQNIIRIFREEIRYYETEIKSKMSTKSAAKLLSNILYSYRGFPLYGEFILAGIDDK-KPT 117
Query: 125 VYSYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTPVVK 182
+ DP G + Y GT + + L Y+ D I +A+ + V+
Sbjct: 118 LVVLDPAGSVLEDEYMAIGTGGPVAIGVLEEL---YQQNIDEKTAIDLAIRAVKQGVR 172
>gi|386850185|ref|YP_006268198.1| proteasome beta subunit [Actinoplanes sp. SE50/110]
gi|359837689|gb|AEV86130.1| proteasome beta subunit [Actinoplanes sp. SE50/110]
Length = 280
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++AIA D ++A D R++ I S + K+ + + +GI+G +E++
Sbjct: 53 HGTTIIAIATADGVVMAGDRRATMGNLIASRDIRKVHPADSYSLIGIAGTAGIGIELIRL 112
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
Q E+ + +G LSL G A L+ ++ + P + L D + G
Sbjct: 113 FQVELEHYEKTEGAMLSLDGKANRLAAMVRGNLGAAMQGLAVVPLFAGFDLAPADSSRAG 172
Query: 124 GVYSYDPVGHC-EKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
++S+D G E+ Y G+ + F + S L Y + + I +A+E L
Sbjct: 173 RIFSFDVAGGLYEETGYEAIGSGSLF---AKSALKKKYRAGVSTEEAIRLAVEAL 224
>gi|14590176|ref|NP_142241.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|74570532|sp|O57983.1|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
horikoshii OT3]
Length = 197
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+ G T + I D ++A+DT++S + + + N KI + ++ A+ +G++ D +
Sbjct: 4 KTGTTTVGIKVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIAR 63
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG-IDGTGKGGVYSYD 129
L+AE A G+P++ A +LS +L E + FPY VQ+++ G +D + + + D
Sbjct: 64 ILEAEARYYYFAWGRPMTTKAMANLLSNILNENKWFPYLVQIIIGGYVD---EPTIANLD 120
Query: 130 PVGHCEKVAYRLHGTSAKFMLA 151
P G Y G+ F +A
Sbjct: 121 PYGGLIFDNYTATGSGTPFAIA 142
>gi|452945254|gb|EME50779.1| 20S proteasome subunits A and B [Amycolatopsis decaplanina DSM
44594]
Length = 278
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 13/176 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ LIA D R++S I S + K+ +AVGI+G+ ++E+V
Sbjct: 50 HGTTIVAVKFAGGVLIAGDRRATSGNLIASRDMEKVHVTDEYSAVGIAGSAGLAIEMVRL 109
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G LSL G L+ L+ + P +V L D G
Sbjct: 110 YAVELAHYEKIEGVSLSLDGKTNKLAGLVKSNLEMAMAGLAVLPLFVGYDLDAEDAKHAG 169
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ SYD G + E Y G+ + F S+ L Y+ + D I A+E L
Sbjct: 170 RIVSYDATGGRYEENAGYHAIGSGSLFAKGSLKKL---YDPDADAEGAIRTAVEAL 222
>gi|118376326|ref|XP_001021345.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89303112|gb|EAS01100.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 209
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 5 MLEHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMAD 64
M + + +GG+++A+ G I +D R + V+ N K+FR+ + +G++G +A
Sbjct: 1 MGDPFSYNGGSMLAMKGEQCVAIGADRRLGAQFQTVATNFQKVFRIQDNILLGLTG-LAT 59
Query: 65 SLEVVSRL-QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKG 123
++ RL Q ++N + + + + ++S LYE+R PY+V ++ G++
Sbjct: 60 DVQTFHRLIQYKVNLYRLRENKDMKVNTFVNLISATLYEKRWGPYFVSPIVAGLEYDEVK 119
Query: 124 GVY----SYDPVGHCEKV--AYRLHGTSAKFMLASMSYL----LSPYESEFDYTDVITMA 173
GV +YD +G C + +++ GT A ++ S L P E E D++ +
Sbjct: 120 GVIPITATYDSIG-CTSIEGEFQVGGTGADGLIGSCESFWRKGLKPDELE----DIVAQS 174
Query: 174 L 174
L
Sbjct: 175 L 175
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQ 73
GT + I D ++A++ R + T+ S + K+F++ + + G +AD ++V++++
Sbjct: 10 GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGMASIGILAD-MQVLTKIA 68
Query: 74 AEINR--SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
S + K +P S+ A++LS +L+ RI PY+V+VL+ GID G ++ D +
Sbjct: 69 KAYMSLYSLDTKTRP-SIRSAAKLLSYVLFSNRILPYFVEVLVGGIDDEGP-HLFIMDAL 126
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEE 176
G + Y GT K +A + P S + D+ A+ +
Sbjct: 127 GSLIEDDYAAVGTGTKLAIAILESNYKPGMSIKEARDLAIKAINQ 171
>gi|328785087|ref|XP_624958.3| PREDICTED: proteasome subunit beta type-3-like [Apis mellifera]
Length = 205
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG ++A+ G + IA+D R ++ + KIF + + + + G D+ V+ +
Sbjct: 7 NGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDTQTVMEK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L+ +N + + + A M+S LLYERR PY+V+ ++ G++
Sbjct: 67 LRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLN 113
>gi|8671508|dbj|BAA96837.1| beta 4 subunit of 20S proteasome [Oryza sativa Japonica Group]
Length = 212
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 1/164 (0%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
V+ + G D A++A+DT + + + ++ K+ L + +G SG D ++ +Q
Sbjct: 3 CVIGVVGRDIAVVAADTSAVQSILVHKTDEDKVMVLDSHKLMGASGEPGDRVQFTEFIQK 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLS-LLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
++ PLS TA L R PYYV VLL G D +Y D +
Sbjct: 63 NLHLYQFRNNIPLSTAATANFTRGELATALRKNPYYVNVLLAGYDSDVGASLYYIDYIAT 122
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K+ G + F L+ M L P S + D++ ++E+
Sbjct: 123 FHKIEKGAFGYGSYFCLSLMDKLYRPDMSVEEAVDLVDKCIKEI 166
>gi|170030525|ref|XP_001843139.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
gi|167867380|gb|EDS30763.1| proteasome subunit beta type 3 [Culex quinquefasciatus]
Length = 205
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IA+D R ++ + KIF + +G+ G D L V R
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKIFEINPHMYLGLVGLQTDILTVHQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
L N + + ++ A MLS LYE+R PY+++ ++ G+D SY+P
Sbjct: 67 LLFRKNLYEVRENRQMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLDPK------SYEP 119
>gi|430813166|emb|CCJ29467.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 179
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 21 GPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINRSA 80
G D IASD R G +V+N+ KI + + +G+SG D + ++ R + +
Sbjct: 3 GKDCVAIASDLRLGKGGLMVTNDFSKIIPVTEKIYMGLSGLATDIVTLLIRYNVNLYKLQ 62
Query: 81 EAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDPVGHCEKVA 138
E + +P +L A +LS +LY++R Y+V +L G+D TG+ + D +G C +A
Sbjct: 63 EERVIEPKTL---ANLLSTVLYKKRFATYFVMPILAGLDSKTGRPFICGLDNIG-CLDIA 118
Query: 139 --YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+ + GT+++ + L P D + I+ AL
Sbjct: 119 KDFVISGTASEQLYGICECLWEPGLEPDDLFETISQAL 156
>gi|380022329|ref|XP_003695002.1| PREDICTED: proteasome subunit beta type-3-like [Apis florea]
Length = 205
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 57/107 (53%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG ++A+ G + IA+D R ++ + KIF + + + + G D+ V+ +
Sbjct: 7 NGGAIIAMKGKNCVAIAADRRFGIQAQTITCDFQKIFEMGSHLYLSLPGLATDTQTVMEK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L+ +N + + + A M+S LLYERR PY+V+ ++ G++
Sbjct: 67 LRFRLNLYELKENRKIHPKAFASMVSNLLYERRFGPYFVEPIIAGLN 113
>gi|380015922|ref|XP_003691943.1| PREDICTED: proteasome subunit beta type-2-like [Apis florea]
Length = 207
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
++ I DF L+A+D ++ + ++ N++ KI ++ ++ + +SG D+ + +
Sbjct: 3 CLIGIQFKDFVLVAADMTTAQSIMVMKNDEEKIHKMSDKLIMAVSGESGDTTQFSEYIGK 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLS---LLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
I G LS P A + + L Y R PY+V +L+ G D +Y D +
Sbjct: 63 NIQLYKMRNGYELS-PKAAALFTRRNLADYLRSRTPYFVNLLMAGYDDNTGPELYFIDYL 121
Query: 132 GHCEKVAYRLHGTSAKFMLA 151
C KV Y HG F L+
Sbjct: 122 ASCVKVPYASHGYGGFFSLS 141
>gi|346978239|gb|EGY21691.1| proteasome component PUP3 [Verticillium dahliae VdLs.17]
Length = 222
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 7 EHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSL 66
+ + GG +A+ G D IA D R VSNN KIF+ +G++G D
Sbjct: 31 NNLILDGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQY-GDVFLGLTGLATDVT 89
Query: 67 EV--VSRLQAEINRSAEAKG-QPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGK 122
V + R ++ + R E + P + A ++S LYERR PY+V ++ G+D TGK
Sbjct: 90 TVGDLFRYKSNMYRLREERNIAPRTF---ANLVSSSLYERRFGPYFVSPVVAGLDPKTGK 146
Query: 123 GGVYSYDPVGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTD 168
+ +D +G C A + + GT+++ + L P S + D
Sbjct: 147 PFICGFDSIG-CIDFAKDFIVSGTASEQLFGMCESLWEPDLSLLNAVD 193
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + + D ++AS+ R++ I S K++++ + A+ +G++ D+ ++V
Sbjct: 8 KGTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQLVRL 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+ E + + +++ G A ++S L R +P VQ+L+ G+D G G+YS D +
Sbjct: 68 VNVESQLYKMRRNESMTIKGIATLMSNFLNSNRYYPMMVQLLIGGVDKNGP-GIYSLDAL 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|54025141|ref|YP_119383.1| proteasome subunit beta [Nocardia farcinica IFM 10152]
gi|81374566|sp|Q5YUX2.1|PSB_NOCFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|54016649|dbj|BAD58019.1| putative proteasome beta subunit [Nocardia farcinica IFM 10152]
Length = 288
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A++ LIA D R++ + S + K++ +A GI+G ++E+V
Sbjct: 56 HGTTIVAVSYRGGVLIAGDRRATQGNLLASRDMDKVYITDTFSAAGIAGTAGMAVELVRL 115
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVL-----LVGIDGTG----- 121
E+ + +G PL+ G A LS ++ R P +Q L LVG D
Sbjct: 116 FAVELEHYEKIEGVPLTFDGKANKLSKMV--RDNLPAALQGLAVVPVLVGYDERAGDPDR 173
Query: 122 KGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
G + SYD VG E+ Y G+ + F S+ L Y D + +ALE L
Sbjct: 174 AGRIVSYDVVGGRSEERFGYTAVGSGSMFAKTSLKKL---YAKGIDQARALRIALESL 228
>gi|225459609|ref|XP_002285871.1| PREDICTED: proteasome subunit beta type-3-A isoform 1 [Vitis
vinifera]
gi|302141789|emb|CBI18992.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 79/164 (48%), Gaps = 1/164 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G + IASD R V+ + KI+R+ ++ +G+SG D+ + R
Sbjct: 7 NGSALIAMVGKNCFAIASDRRFGVQLQTVATDFQKIYRIHDRVFLGLSGLATDAQTLYQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L + + + A ++S LLYE+R PY+ Q ++ G+ K + + D +
Sbjct: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDEDKPFICTMDSI 126
Query: 132 GHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G E + + GT+++ + + + P + ++I+ AL
Sbjct: 127 GAKELAKDFVVAGTASESLYGACEAMFKPDMEPEELFEIISQAL 170
>gi|66519157|ref|XP_393468.2| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Apis
mellifera]
Length = 207
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
++ I DF L+A+D ++ + ++ N++ KI ++ ++ + +SG D+ + +
Sbjct: 3 CLIGIQFKDFVLVAADMTTAQSIMVMKNDEEKIHKMSDKLIMAVSGESGDTTQFSEYIGK 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLS---LLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
I G LS P A + + L Y R PY+V +L+ G D +Y D +
Sbjct: 63 NIQLYKMRNGYELS-PKAAALFTRRNLADYLRSRTPYFVNLLMAGYDDNTGPELYFIDYL 121
Query: 132 GHCEKVAYRLHGTSAKFMLA 151
C KV Y HG F L+
Sbjct: 122 ASCVKVPYASHGYGGFFSLS 141
>gi|395772529|ref|ZP_10453044.1| 20S proteasome subunit beta [Streptomyces acidiscabies 84-104]
Length = 279
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQL-KIFRLPNQTAVGISGNMADSLEVVS 70
HG T++A D L+A D R ++ G +++N ++ K+F +AV I+G + ++E+V
Sbjct: 49 HGTTIVAATYADGVLLAGD-RRATMGNVIANREVDKVFAADEYSAVAIAGTLGFAIELVR 107
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGG 124
Q E+ + +G LSL G A L+ ++ R +Q L V G D G+G
Sbjct: 108 LFQLELEHYEKIEGTALSLDGKANRLTTMV--RGNLGMAMQGLAVVPVFAGYDVDRGEGR 165
Query: 125 VYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+++YD G E + G+ + + S+ L P SE D + AL
Sbjct: 166 IFTYDVTGGRSEESSGFAATGSGSVYARGSLKKLYRPGMSEADAVTAVVQAL 217
>gi|397628563|gb|EJK68962.1| hypothetical protein THAOC_09830 [Thalassiosira oceanica]
Length = 204
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 65/121 (53%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+AG D IASD R + V+ + K+F++ ++ VG++G D +
Sbjct: 7 NGAAIIAMAGKDCVAIASDNRLGISYQTVAMDFKKVFKMNDRLMVGLAGLATDVQTLDQL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ +N + + ++ ++S +LYE+R PY+ + ++ G+D GK + + D +
Sbjct: 67 LRFRMNLYELREEREMTPEVFTNLMSNMLYEKRFGPYFCEPVIAGLDPKGKPFLGTMDLI 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|302925511|ref|XP_003054110.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735051|gb|EEU48397.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 205
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG +A+ G D IA D R VSNN KIF+ +G++G D V
Sbjct: 8 NGGACVAMVGKDCVAIACDLRLGLQALTVSNNFPKIFQY-GDVFLGLTGLATDVNTVSDL 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
+ + N + + ++ A ++S LYERR PY+V ++ G+D TGK + +D
Sbjct: 67 FRYKTNMYRLREERAIAPRTFANLVSSSLYERRFGPYFVSPVVAGLDPKTGKPFICGFDS 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSP 159
+G C A + + GT+++ + L P
Sbjct: 127 IG-CIDFAKDFIVSGTASEQLFGMCEGLWEP 156
>gi|297198505|ref|ZP_06915902.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sviceus ATCC 29083]
gi|197716162|gb|EDY60196.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sviceus ATCC 29083]
Length = 281
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVTFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D +G ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDVDRERGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ + G+ + F +M L +E T ++ AL
Sbjct: 172 YDVTGGRSEEHNFAATGSGSVFARGAMKKLYRGDLTEEQATTLVVQAL 219
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+ G T + I D ++A+DT++S + + + N KI + ++ A+ +G++ D +
Sbjct: 4 KTGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDLQALAR 63
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
L+AE G+P++ A +LS +L E + FPY VQ+++ G + + S DP
Sbjct: 64 MLEAEAKYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQIIIGGY--VEEPTLASLDP 121
Query: 131 VGHCEKVAYRLHGTSAKFMLA 151
+G Y G+ + F +A
Sbjct: 122 LGGLIFDNYTTTGSGSPFAIA 142
>gi|302518112|ref|ZP_07270454.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. SPB78]
gi|318059100|ref|ZP_07977823.1| proteasome subunit beta [Streptomyces sp. SA3_actG]
gi|318077875|ref|ZP_07985207.1| proteasome subunit beta [Streptomyces sp. SA3_actF]
gi|302427007|gb|EFK98822.1| proteasome endopeptidase complex, archaeal, beta subunit
[Streptomyces sp. SPB78]
Length = 280
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+A ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAVGIAGTAGLAVEMVKL 110
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A L+ ++ R +Q L V G D G G +
Sbjct: 111 FQLELEHFEKVEGATLSLEGKANRLATMI--RGNLGMAMQGLAVVPLFAGYDVDRGTGRI 168
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSP 159
+SYD G E+ Y G+ + F ++ L P
Sbjct: 169 FSYDVAGGRSEEYGYASTGSGSVFARGALKKLYRP 203
>gi|379709533|ref|YP_005264738.1| proteasome PrcB [Nocardia cyriacigeorgica GUH-2]
gi|374847032|emb|CCF64102.1| proteasome (beta subunit) PrcB [Nocardia cyriacigeorgica GUH-2]
Length = 284
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A++ LIA D R++ + S + K++ +A GI+G ++E+V
Sbjct: 55 HGTTIVAVSFRGGVLIAGDRRATQGNLLASRDMEKVYITDTYSAAGIAGTAGMAVEMVRL 114
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G PL+ G A LS ++ + + P V L D G
Sbjct: 115 FAVELEHYEKIEGVPLTFDGKANKLSKMVRDNLPAALQGLAVVPVLVGYDLEATDPDKVG 174
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ SYD VG E+ Y G+ + F +S+ L Y D + +A+E L
Sbjct: 175 RIISYDVVGGQSEERFGYAAVGSGSHFAKSSLKKL---YAKGIDEDRALRIAVESL 227
>gi|332017895|gb|EGI58555.1| Proteasome subunit beta type-2 [Acromyrmex echinatior]
Length = 207
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
++ I DF L+A+D ++ + ++ +++ KI ++ ++ + ISG D+ + +
Sbjct: 3 CLIGIQCKDFVLVAADMTTTQSIIVMKSDEHKIHKISDKLVMAISGESGDTTQFSEYIGK 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLS---LLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
I G LS P A + L Y R PY+V +LL G D +Y D +
Sbjct: 63 NIQLYKMRNGYELS-PKAAACFTRRNLADYLRSRTPYFVNMLLAGYDDDLGAELYFIDYL 121
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYL 156
C KV Y HG F SMS L
Sbjct: 122 ASCVKVPYATHGYGGMF---SMSVL 143
>gi|441508557|ref|ZP_20990481.1| proteasome subunit beta [Gordonia aichiensis NBRC 108223]
gi|441447585|dbj|GAC48442.1| proteasome subunit beta [Gordonia aichiensis NBRC 108223]
Length = 293
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ HG T++A++ P ++A D R++ I + + K++ +A GI+G ++E+V
Sbjct: 60 IPHGTTIVAVSFPGGVVLAGDRRATMGNIIATRDVQKVYVTDEYSAAGIAGTAGIAIEMV 119
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ-----VLLVGID-----G 119
E+ + +G PL+L G L+ ++ R +Q LLVG D
Sbjct: 120 RLFTVELEHYEKIEGVPLTLDGKVSRLASMV--RGNLGAAMQGLAAIPLLVGYDIDHDSP 177
Query: 120 TGKGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
T +G ++S+D G H E Y+ G+ + F +S+ L Y + D + +A+E L
Sbjct: 178 TERGRIFSFDVAGDRHEEFGGYQAIGSGSVFAKSSLKKL---YRPDLDADSALAIAVESL 234
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+ G T + I D ++A+DT++S + + + N KI + ++ A+ +G++ D +
Sbjct: 4 KTGTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKIIPITDRIAITTAGSVGDVQMLAR 63
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
L+AE G+P++ A +LS +L E R FPY VQ+++ G + + + DP
Sbjct: 64 YLEAEARYYYFTWGRPMTTKAMANLLSNILNENRWFPYLVQIIIGGY--VDEPTIANLDP 121
Query: 131 VGHCEKVAYRLHGTSAKFMLASM 153
G Y G+ F +A +
Sbjct: 122 FGGLIFDDYTATGSGTPFAIAVL 144
>gi|333028209|ref|ZP_08456273.1| putative 20S proteasome beta-subunit [Streptomyces sp. Tu6071]
gi|332748061|gb|EGJ78502.1| putative 20S proteasome beta-subunit [Streptomyces sp. Tu6071]
Length = 280
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+A ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 51 HGTTILALAFDGGVILAGDRRATMGNVIAQRDVEKVFPADEYSAVGIAGTAGLAVEMVKL 110
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A L+ ++ R +Q L V G D G G +
Sbjct: 111 FQLELEHFEKVEGTTLSLEGKANRLATMI--RGNLGMAMQGLAVVPLFAGYDVDRGTGRI 168
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSP 159
+SYD G E+ Y G+ + F ++ L P
Sbjct: 169 FSYDVAGGRSEEYGYASTGSGSVFARGALKKLYRP 203
>gi|326382282|ref|ZP_08203974.1| 20S proteasome A and subunit Bs [Gordonia neofelifaecis NRRL
B-59395]
gi|326199012|gb|EGD56194.1| 20S proteasome A and subunit Bs [Gordonia neofelifaecis NRRL
B-59395]
Length = 285
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ HG T++A+ P ++A D R++ I + + K++ TA GI+G ++E+V
Sbjct: 47 IPHGTTIVAVGYPGGVILAGDRRATMGNLIATRDVQKVYVTDEFTAAGIAGTAGIAIEMV 106
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ-----VLLVGIDGTG--- 121
E+ + +G PL+L G L+ ++ R +Q LLVG D G
Sbjct: 107 RLFAVELEHYEKIEGVPLTLDGKVARLATMV--RSNLGAAMQGLAAVPLLVGFDAEGDPD 164
Query: 122 -KGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYL 156
+G ++S+D G H E Y G+ + F +S+ L
Sbjct: 165 DRGRIFSFDVAGSRHEETAGYDAIGSGSVFAKSSLKKL 202
>gi|318103394|ref|NP_001188165.1| proteasome subunit beta type-2 [Ictalurus punctatus]
gi|308322043|gb|ADO28159.1| proteasome subunit beta type-2 [Ictalurus furcatus]
gi|308323629|gb|ADO28950.1| proteasome subunit beta type-2 [Ictalurus punctatus]
Length = 199
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+A+D ++S+ + ++ K+F+L + + G D+++ +Q
Sbjct: 4 LIGIQGQDFVLVAADNVAASSIIKMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D +Y D +
Sbjct: 64 VQLYKMRNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDEADGPALYYMDYMSA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELT 178
K + HG A L+ M P + + D++ +EEL
Sbjct: 124 LAKAPFAAHGYGAFLTLSIMDRYYRPDLTREEALDLLKKCIEELN 168
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 4/121 (3%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + D ++A++TR++ + + N K+F++ ++ I+G ++ + ++
Sbjct: 8 EGTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQIDDKIGATIAGTVSHAQSLMDI 67
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AEI+ + +S+ A + S +L R PYYVQ +L G+D G +Y+ DP
Sbjct: 68 LKAEISLYKLRNEKDMSIDALAVLTSNILKSR---PYYVQTILAGVDKDG-AKLYTLDPS 123
Query: 132 G 132
G
Sbjct: 124 G 124
>gi|330801313|ref|XP_003288673.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
gi|325081295|gb|EGC34816.1| proteasome subunit beta type 3 [Dictyostelium purpureum]
Length = 205
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 58/108 (53%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG + + G + IASD R +SN+ K++R+ ++ +GISG + D+ + +
Sbjct: 7 NGGACIVMTGKNCVAIASDLRFGIQQQTISNDYPKVYRVNDKCFIGISGLVTDAQTLHQK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG 119
+ N + + +S +++ +LYE+R PY+ + L+ G++G
Sbjct: 67 IVFRHNLYKLREERDMSPKVVTNLIANMLYEKRFGPYFTEPLICGLEG 114
>gi|297195371|ref|ZP_06912769.1| 20S proteasome beta-subunit [Streptomyces pristinaespiralis ATCC
25486]
gi|197719259|gb|EDY63167.1| 20S proteasome beta-subunit [Streptomyces pristinaespiralis ATCC
25486]
Length = 281
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVATTFPGGVVLAGDRRATMGNMIAQRDIEKVFPADEYSAVGIAGTAGLAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G LSL G A LS ++ + V L G D KG ++S
Sbjct: 112 FQLELEHFEKVEGAQLSLEGKANRLSTMIRSNLGMAMQGLAVVPLFAGYDIDREKGRIFS 171
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
YD G E+ + G+ + F +M L +E T ++ AL
Sbjct: 172 YDVTGGRSEEHGFAATGSGSIFARGAMKKLYREDLTEQQATTLVIQAL 219
>gi|336118259|ref|YP_004573028.1| 20S proteasome beta-type subunit [Microlunatus phosphovorus NM-1]
gi|334686040|dbj|BAK35625.1| 20S proteasome beta-type subunit [Microlunatus phosphovorus NM-1]
Length = 279
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 8/171 (4%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A P ++A D R++ I + K++ + +GI+G+ ++E+V
Sbjct: 50 HGTTIVAATFPGGVVVAGDRRATMGNMIAQRDIEKVYPADEYSIIGIAGSAGLAVEMVRL 109
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER---RIFPYYVQVLLVGID-GTGKGGVYS 127
Q E+ + +G PLSL G A L+ ++ + + + V L G D +G ++S
Sbjct: 110 FQLELEHYEKIEGAPLSLVGKANRLATMIRQNLGMALQGFVVVPLFAGWDLARQEGRIFS 169
Query: 128 YDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
YD G E+ A+ G+ + F S+ L Y + T+ T ++ L
Sbjct: 170 YDATGGRYEEQAFFSVGSGSVFARGSLKKL---YRPDLTATEAATAVIQAL 217
>gi|375082621|ref|ZP_09729674.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
gi|374742699|gb|EHR79084.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
Length = 199
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+ G T + I D ++A+DT++S + + + N KI + ++ A+ +G++ D +
Sbjct: 4 KTGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDKIAITTAGSVGDLQALAR 63
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
L+AE G+P++ A +LS +L E + FPY VQ+++ G + + S DP
Sbjct: 64 MLEAEARYYQFTWGKPMTAKAMANLLSNILNESKWFPYMVQIIIGGY--VEEPTLASLDP 121
Query: 131 VGHCEKVAYRLHGTSAKFMLA 151
+G Y G+ + F +A
Sbjct: 122 LGGLIFDNYTATGSGSPFAIA 142
>gi|269956287|ref|YP_003326076.1| 20S proteasome subunits A and B [Xylanimonas cellulosilytica DSM
15894]
gi|302595791|sp|D1BS26.1|PSB_XYLCX RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|269304968|gb|ACZ30518.1| 20S proteasome A and B subunits [Xylanimonas cellulosilytica DSM
15894]
Length = 270
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
H T++A+ D ++A D R+++ I S K+F + + +GISG+ +++
Sbjct: 46 HATTIVALTFQDGVVMAGDRRATAGTMIASREIEKVFPADDYSVIGISGSAGIGVDLARL 105
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A L LL R P +Q +V G D G G +
Sbjct: 106 FQLELEHYEKIEGSLLSLDGKANRLGTLL--RGNLPLAMQGFVVVPLFGGYDLDRGAGRI 163
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+SYD G E+ + G+ A F ++ L P D + + +A+E L
Sbjct: 164 FSYDATGGRYEEHEHHGTGSGAIFARGALKKLWRP---GMDAAEAVKVAVEAL 213
>gi|194854891|ref|XP_001968442.1| GG24870 [Drosophila erecta]
gi|190660309|gb|EDV57501.1| GG24870 [Drosophila erecta]
Length = 210
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
T++ I GPDF ++ASDT + + + ++Q KI RL + + G+ D+++ +
Sbjct: 5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDYISK 64
Query: 75 EINRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
++ + G LS A +L Y R Y V +LL G DG ++ D G
Sbjct: 65 NLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDGVEGPDLHYIDSYG 124
Query: 133 HCEKVAYRLHGTSAKF 148
+ + + HG + F
Sbjct: 125 AAQPINHAGHGWGSMF 140
>gi|401626020|gb|EJS43988.1| pup3p [Saccharomyces arboricola H-6]
Length = 205
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 3/165 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+AG D IA D R S VSN KIF G++G +D +
Sbjct: 8 NGGVVVAMAGKDCVAIACDLRLGSQSLGVSNKFEKIFHY-GHVFFGVTGLASDVTTLNEM 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDG-TGKGGVYSYDP 130
+ + N + + + +++S LYERR PY+V ++ GI+ +GK + +D
Sbjct: 67 FRYKTNLYKLREDRAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDL 126
Query: 131 VGHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G ++ + + GT++ + L P D + I+ AL
Sbjct: 127 IGCIDEAKDFIVSGTASDQLFGMCESLYEPNLEPEDLFETISQAL 171
>gi|224063046|ref|XP_002300970.1| predicted protein [Populus trichocarpa]
gi|118487526|gb|ABK95590.1| unknown [Populus trichocarpa]
gi|222842696|gb|EEE80243.1| predicted protein [Populus trichocarpa]
Length = 204
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 80/164 (48%), Gaps = 1/164 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G + IASD R N V+ + +I+++ ++ VG+SG D+ + R
Sbjct: 7 NGSAIVAMVGKNCFAIASDRRLGVNLQTVATDFQRIYKIHDKLFVGLSGLGTDAQTLYQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L + + + A ++S +LYE+R PY+ Q ++ G+D K + + D +
Sbjct: 67 LVFRHKMYQLREERDMKPETFANLVSAVLYEKRFGPYFCQPVIAGLDDDDKPFICTMDFI 126
Query: 132 GHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G E + + G++++ + + P + +V++ AL
Sbjct: 127 GAKELAKDFVVAGSASESLYGACEAFFKPDMEPDELFEVVSQAL 170
>gi|433604992|ref|YP_007037361.1| Proteasome subunit beta [Saccharothrix espanaensis DSM 44229]
gi|407882845|emb|CCH30488.1| Proteasome subunit beta [Saccharothrix espanaensis DSM 44229]
Length = 283
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG TV+A+ ++A D R++ TI + K+F + +AVGI+G ++E+V
Sbjct: 54 HGTTVVALTYKGGVVLAGDRRATMGSTIAQRDMKKVFVTDDYSAVGIAGTAGIAIEIVRL 113
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G LSL G A LS ++ + P + +D G
Sbjct: 114 FAVELRHYEKIEGVSLSLDGKANRLSAMIKGNLDAALAGLAVVPLFAGFDTEAVDPDRAG 173
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSP 159
+ SYD G + E + Y+ G+ + F +++ L +P
Sbjct: 174 RIVSYDVTGGRYEESLGYQAVGSGSLFAKSALKKLYNP 211
>gi|62751339|ref|NP_001015615.1| proteasome subunit beta type-2 [Bos taurus]
gi|426215154|ref|XP_004001839.1| PREDICTED: proteasome subunit beta type-2 isoform 1 [Ovis aries]
gi|75060936|sp|Q5E9K0.1|PSB2_BOVIN RecName: Full=Proteasome subunit beta type-2
gi|59858075|gb|AAX08872.1| proteasome beta 2 subunit [Bos taurus]
gi|59858205|gb|AAX08937.1| proteasome beta 2 subunit [Bos taurus]
gi|74354591|gb|AAI02368.1| Proteasome (prosome, macropain) subunit, beta type, 2 [Bos taurus]
gi|296488894|tpg|DAA31007.1| TPA: proteasome subunit beta type-2 [Bos taurus]
gi|440908579|gb|ELR58582.1| Proteasome subunit beta type-2 [Bos grunniens mutus]
Length = 201
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPD+ L+ASD ++SN + ++ K+F++ + + G D+++ +Q
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D +Y D +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K + HG A L+ + +P S +++ LEEL
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISREKAVELLRKCLEEL 167
>gi|221052302|ref|XP_002257727.1| beta3 proteasome subunit [Plasmodium knowlesi strain H]
gi|193807558|emb|CAQ38063.1| beta3 proteasome subunit, putative [Plasmodium knowlesi strain H]
Length = 204
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 19 IAGPDFALIASDTR-SSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEIN 77
++G IA D R ++N T +S N K+F++ + VG+SG D + L+ +N
Sbjct: 1 MSGAQCVAIACDLRLGANNFTTISTNFTKVFKMNDYVYVGLSGLATDIQTLYELLRYRVN 60
Query: 78 RSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG------IDGTGKG------GV 125
+ P+ + A MLS +LY R PY+V ++VG D GK +
Sbjct: 61 LYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVKHTFDDEGKKIRTFEPYL 120
Query: 126 YSYDPVG-HCEKVAYRLHGTSAK 147
+YD +G CE + ++G +++
Sbjct: 121 TAYDLIGAKCETKDFVVNGVTSE 143
>gi|377563320|ref|ZP_09792671.1| 20S proteasome beta-type subunit [Gordonia sputi NBRC 100414]
gi|377529568|dbj|GAB37836.1| 20S proteasome beta-type subunit [Gordonia sputi NBRC 100414]
Length = 293
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 17/180 (9%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ HG T++A++ P ++A D R++ I + + K++ +A GI+G ++E+V
Sbjct: 60 IPHGTTIVAVSFPGGVVLAGDRRATMGNIIATRDVQKVYVTDEYSAAGIAGTAGIAIEMV 119
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ-----VLLVGID-----G 119
E+ + +G PL+L G L+ ++ R +Q LLVG D
Sbjct: 120 RLFTVELEHYEKIEGVPLTLDGKVSRLASMV--RGNLGAAMQGLAAIPLLVGYDIDHDSP 177
Query: 120 TGKGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
T +G ++S+D G H E Y+ G+ + F +S+ L Y + D + +A+E L
Sbjct: 178 TERGRIFSFDVAGDRHEEFGGYQAIGSGSVFAKSSLKKL---YRHDLDAGSALAIAVESL 234
>gi|405954435|gb|EKC21877.1| Proteasome subunit beta type-2 [Crassostrea gigas]
Length = 208
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I G DF L+ASDT S+ + + + K+ R+ + + +SG D+++ +
Sbjct: 4 LIGIQGKDFVLVASDTSSARSILSMKQDTDKMHRMTDNLIMLVSGESGDTVQFAEFISKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
I G LS A +L Y R PY V +L+ G D +Y D +
Sbjct: 64 IQLYKMRNGYDLSPSAAANFTRKNLADYLRSRTPYMVNLLMAGYDKNEGPSLYFMDYLAS 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K + HG A F LA + + + +++TM +EE+
Sbjct: 124 MNKCPFAAHGYGAFFSLAILDRYYTEDVTRARAVELLTMCVEEI 167
>gi|195444118|ref|XP_002069722.1| GK11424 [Drosophila willistoni]
gi|194165807|gb|EDW80708.1| GK11424 [Drosophila willistoni]
Length = 205
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IA+D R +S + K+F + + +G++G D L V R
Sbjct: 7 NGGCVVAMRGKECVAIATDHRFGVQAQTISTDFKKVFHIAPRMFLGLTGLQTDILTVRDR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGI 117
L N + + ++ + MLS LYE R PY+V+ ++ G+
Sbjct: 67 LMFRKNLYETRENREMAPKPFSAMLSSFLYEHRFGPYFVEPVVAGL 112
>gi|332017819|gb|EGI58480.1| Proteasome subunit beta type-3 [Acromyrmex echinatior]
Length = 238
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 55/107 (51%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IA+D R ++ + KI+ + V + G D+ V+ R
Sbjct: 40 NGGAVIAMKGKNCVAIAADRRFGIQAQTITCDFQKIYEMGPHLYVSLPGLATDTQTVMER 99
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
L+ +N + + + M+S LLYERR PY+V+ ++ G+D
Sbjct: 100 LRFRLNLYELKENRKIHPKTFTAMISNLLYERRFGPYFVEPIVAGLD 146
>gi|66358224|ref|XP_626290.1| possible proteasome component [Cryptosporidium parvum Iowa II]
gi|46228012|gb|EAK88932.1| possible proteasome component [Cryptosporidium parvum Iowa II]
Length = 204
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNG-TIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+GG ++A+ G + A+D R SNG +S + K+ R ++T +G SG D + +
Sbjct: 6 NGGAILAMKGKECVAFATDMRLGSNGYRTISTDFDKVIRPSSKTLMGFSGLATDIHTLTN 65
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
++ + N + + + + + M + +LY +R PY+V+ ++ G+D + YD
Sbjct: 66 LIKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDNNNVPFIAGYDL 125
Query: 131 VGHCEKVA--YRLHGTS 145
+G C V + + GT+
Sbjct: 126 IG-CLSVCSEFAISGTA 141
>gi|47028283|gb|AAT09074.1| proteasome beta subunit [Bigelowiella natans]
Length = 204
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 63/121 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G D IASD R ++ + K+F++ ++ +G+SG + D + +
Sbjct: 7 NGSAIVAMVGKDCVAIASDMRYGIQQQTIACDMKKVFQMGDKLFIGLSGLLTDVQTLKQK 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
++ + + +P+ + ++S LYE+R PY+V+ ++ G+D + + D +
Sbjct: 67 FDFKLKMYSLRENRPMRPKVFSSLVSSTLYEKRFGPYFVEPVVAGLDAKEGPFIAAMDLI 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|294930707|ref|XP_002779664.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
gi|239889072|gb|EER11459.1| proteasome subunit beta type, putative [Perkinsus marinus ATCC
50983]
Length = 198
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 2/167 (1%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
IAG D+ +IA+D+ + + KI+ + N V +G ADS + + +
Sbjct: 4 CAFGIAGKDWVIIAADSHVEQSIVKFKTTEDKIYEMDNNKLVAAAGPQADSNQFLEFISR 63
Query: 75 EINRSAEAKGQPLSLPGTAEMLSLLLYER-RIFPYYVQVLLVGIDGT-GKGGVYSYDPVG 132
+ A G L+ A L + R PY V +L+ G D G +Y D +
Sbjct: 64 NVELYALVNGVQLTTHALASFTRNELADALRKGPYQVNMLIGGYDDKDGSASLYYMDYLA 123
Query: 133 HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEELTP 179
C+K+ HG +A F+L + L ++ D D I ++E
Sbjct: 124 SCQKITRGAHGYAAYFVLGLLDKLYKKDMTQEDGLDAIKQCIKECKK 170
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 7 EHYVQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSL 66
E V+ G T + + D ++A+D R+++ I S KI L N A+ +SG +AD+
Sbjct: 19 ERVVRSGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQ 78
Query: 67 EVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ L+ EI S+ A +LS +L+ + FPY VQ+++ G D + +Y
Sbjct: 79 ILSDVLREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQPR--LY 136
Query: 127 SYDPVGHCEKVAYRLHGTSA 146
+ D G + Y G+ +
Sbjct: 137 TLDLFGSITEDKYTATGSGS 156
>gi|14594927|emb|CAC43324.1| putative beta 3 proteasome subunit [Nicotiana tabacum]
Length = 178
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G + IASD R ++ + +IFR+ ++ +G+SG D L + R
Sbjct: 7 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFRIHDKVFIGLSGLGTDVLTLYQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L + + + A ++S LLYE+R PY+ Q ++ G+ K + + D +
Sbjct: 67 LVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPVIAGLGDDDKPFICTMDSI 126
Query: 132 GHCEKVA-YRLHGTSAKFMLASMSYLLSP 159
G E + + GT+++ + + + P
Sbjct: 127 GAKELAKDFVVAGTASESLYGACEAMFKP 155
>gi|389742559|gb|EIM83745.1| 20S proteasome subunit beta 3 [Stereum hirsutum FP-91666 SS1]
Length = 213
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IASD R + V+ N K+F + ++ +G+ G D + R
Sbjct: 7 NGGSVVAMVGKDCVAIASDLRLGNQALTVATNFEKVFPVTDRIYLGLPGLATDVTTLRER 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID 118
+ +N + + + A ++S LYE R PY+++ ++ G++
Sbjct: 67 FRFRVNMYTIKESREIQPSTFAHLVSSTLYEHRFGPYFIEPVIAGLE 113
>gi|340721459|ref|XP_003399137.1| PREDICTED: proteasome subunit beta type-2-like [Bombus terrestris]
gi|350406548|ref|XP_003487808.1| PREDICTED: proteasome subunit beta type-2-like [Bombus impatiens]
Length = 207
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
++ I DF L+A+D ++ + ++ N++ KI ++ ++ + +SG D+ + +
Sbjct: 3 CLIGIQFKDFVLVAADMTTAQSIMVMKNDEEKIHKMSDKLIMAVSGESGDTTQFSEYIGK 62
Query: 75 EINRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVG 132
I G LS A +L Y R PY+V +L+ G D +Y D +
Sbjct: 63 NIQLYKMRNGYELSPKAAASFTRRNLADYLRSRTPYFVNLLMAGYDVNSGPELYFIDYLA 122
Query: 133 HCEKVAYRLHGTSAKFMLA 151
C KV Y HG F L+
Sbjct: 123 SCVKVPYAAHGYGGFFSLS 141
>gi|345013958|ref|YP_004816312.1| proteasome subunit beta [Streptomyces violaceusniger Tu 4113]
gi|344040307|gb|AEM86032.1| proteasome, beta subunit [Streptomyces violaceusniger Tu 4113]
Length = 281
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 12/173 (6%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A++ P ++A D R++ I + K+F +AVGI+G ++E+V
Sbjct: 52 HGTTIVAVSFPGGVVLAGDRRATMGNVIAQRDIEKVFPADEYSAVGIAGTAGIAVEMVKL 111
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKGGV 125
Q E+ + +G LSL G A LS ++ R +Q L V G D KG +
Sbjct: 112 FQLELEHFEKVEGTVLSLEGKANRLSTMI--RGNLGMAMQGLAVVPLFAGWDVDREKGRI 169
Query: 126 YSYDPV-GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+SYD G E+ + G+ + F ++ L Y + T L+ L
Sbjct: 170 FSYDVTGGRSEERGFAATGSGSMFARGALKKL---YRQDLTEEQAATAVLQAL 219
>gi|262202389|ref|YP_003273597.1| 20S proteasome subunits A and B [Gordonia bronchialis DSM 43247]
gi|302595826|sp|D0LDT1.1|PSB_GORB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PrcB; Flags: Precursor
gi|262085736|gb|ACY21704.1| 20S proteasome A and B subunits [Gordonia bronchialis DSM 43247]
Length = 292
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 2 TEAMLEHY----VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVG 57
EAM H + HG T++A++ P ++A D R++ I + + K++ +A G
Sbjct: 47 AEAMGLHRAADDIPHGTTIVAVSYPGGVILAGDRRATMGNLIATRDVKKVYITDEYSAAG 106
Query: 58 ISGNMADSLEVVSRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQ-----V 112
I+G ++E+V E+ + +G PL+L G L+ ++ R +Q
Sbjct: 107 IAGTAGIAIEMVRLFAVELEHYEKLEGVPLTLDGKVSRLASMV--RGNLGAALQGLAAVP 164
Query: 113 LLVGI-----DGTGKGGVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFD 165
LLVG D T +G ++S+D G H E Y+ G+ + F +S+ L Y + D
Sbjct: 165 LLVGYDIDHDDPTERGRIFSFDVAGDRHEEFGGYQAIGSGSVFAKSSLKKL---YRHDLD 221
Query: 166 YTDVITMALEEL 177
+ +A+E L
Sbjct: 222 EASALAIAVEAL 233
>gi|449545308|gb|EMD36279.1| 20S proteasome subunit beta 3 [Ceriporiopsis subvermispora B]
Length = 208
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 60/117 (51%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+V+A+ G D IASD R + +S+ KIF + ++ VG+ G D + +
Sbjct: 7 NGGSVIAMVGKDCVAIASDLRLGNQSLGISSKFEKIFPMTDRVYVGLPGLATDVTTLHQQ 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSY 128
+ +N + + + A ++S LYE+R PY+++ ++ G+ T G + Y
Sbjct: 67 FRYRLNMYTIKEEREIEPETFAHLVSSTLYEKRFGPYFIEPVIAGLQKTPSGDLKPY 123
>gi|401424718|ref|XP_003876844.1| putative proteasome beta 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493088|emb|CBZ28372.1| putative proteasome beta 3 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 205
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GG+VMA+AG + +I SD R +S K+ + + G++G D V+++
Sbjct: 8 GGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNDSIVYGLTGLRTDQQTFVNKV 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPV 131
Q + + + ++ + M++ +LYE R P++V+ ++ ID TGK + + D +
Sbjct: 68 QFRTDMYKLREERNITGKAFSSMITSMLYEARFGPWFVEPVIGSIDKSTGKVYLCATDLI 127
Query: 132 GH-CEKVAYRLHGTSAKFMLASMSYLLSP 159
G CE Y GT+A+ + L P
Sbjct: 128 GAPCEPEDYVCAGTAAESLHGMCEALWRP 156
>gi|255558626|ref|XP_002520338.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223540557|gb|EEF42124.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 204
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+G ++A+ G + IASD R ++ + +I+++ ++ +G+SG D+ + R
Sbjct: 7 NGSALIAMVGKNCFAIASDRRLGVQLQTIATDFQRIYKIHDRLFLGLSGLATDAQTLYQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L + + ++ A ++S LLYE+R PY+ Q ++ G+ K + + D +
Sbjct: 67 LVFRHKLYQLREERDMNPETFASLVSALLYEKRFGPYFCQPVIAGLSDENKPFICTMDSI 126
Query: 132 GHCEKVA-YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
G E + + GT+++ + + + P + T++I+ AL
Sbjct: 127 GAKELARDFVVAGTASESLYGACESMFKPDLEAEELTEIISQAL 170
>gi|389851755|ref|YP_006353989.1| proteasome subunit beta [Pyrococcus sp. ST04]
gi|388249061|gb|AFK21914.1| proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 197
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+ G T + I D ++A+DT++S + + + N KI + ++ A+ +G++ D ++V++
Sbjct: 4 KTGTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGD-VQVLA 62
Query: 71 R-LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG-IDGTGKGGVYSY 128
R L+AE G+P+S A +LS +L E + FPY VQ+++ G +D + + +
Sbjct: 63 RILEAEARYYYFTWGRPMSTKAMANLLSNILNEHKWFPYLVQIIIGGYVD---EPTIANL 119
Query: 129 DPVGHCEKVAYRLHGTSAKFMLASM 153
DP G Y G+ F +A +
Sbjct: 120 DPFGGLIFDDYTATGSGTPFAIAVL 144
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
G T + + D ++A+D R++ + S K+F++ + A+ +G + D L +V
Sbjct: 2 KGTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAGAGLVGDILSLVRL 61
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+AE G+ +S+ A ++S +L+ R PY+ L+ G D + +YS D
Sbjct: 62 LRAEAKLYRARVGREMSVKAMATLVSNVLHGSRYLPYFAWFLIGGYDVRPR--LYSIDAA 119
Query: 132 GHCEKVAYRLHGTSAKFMLA 151
G + + G+ +F LA
Sbjct: 120 GGVTEERFIAAGSGMEFALA 139
>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG7F19]
Length = 199
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
G T + I + + AS+ R + +VS K F + Q +G +AD ++++S
Sbjct: 8 GATAVGITYDEGVVFASERRIAYGNFVVSKTTKKTFVITPQVGAACAGLVAD-MQILS-- 64
Query: 73 QAEINRSAEAKGQPLSL-----PGT-AEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY 126
+ SA AK + + + P T A+M+S ++YERR FP QV++ G+ K +Y
Sbjct: 65 ---LQISALAKIRKMEIKREVPPNTIAKMMSNMMYERRFFPLLTQVIVGGL--VDKPVIY 119
Query: 127 SYDPVGHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ DP+G Y GT A+ ++ L Y+ E + T+ +A++ +
Sbjct: 120 TLDPLGSVLPDDYAAVGTGAEM---ALGILDQQYKKELNETEATDLAVKSI 167
>gi|145341760|ref|XP_001415971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576194|gb|ABO94263.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSN-GTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+G V+A+ G D IASD R N + + K+ ++ ++ +G++G +AD L +
Sbjct: 7 NGAAVIAMTGKDCVAIASDLRLGINQNQTAAVDYSKLHKIHDRLYLGLTGLIADQLTLAQ 66
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDP 130
+L+ + + + + +S ++S LYE+R PYY + ++ G+D GK + S D
Sbjct: 67 KLKFKHDMYELRENRVMSPKVFGAVVSATLYEKRFSPYYTEPVVAGLDADGKPYITSMDL 126
Query: 131 VG 132
+G
Sbjct: 127 IG 128
>gi|367052597|ref|XP_003656677.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
gi|347003942|gb|AEO70341.1| hypothetical protein THITE_2147182 [Thielavia terrestris NRRL 8126]
Length = 192
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 19 IAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAEINR 78
+AG D IA D R VSNN KIF+ + +G++G D V + ++N
Sbjct: 1 MAGKDCVAIACDLRLGLQALTVSNNFPKIFQYGDHVFLGLTGLATDVATVADLFRYKVNL 60
Query: 79 SAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPVGHCEKV 137
+ + ++ A ++S LYERR P++V ++ G+D TG+ + +D +G C
Sbjct: 61 YRLREERHIAPRTFANLVSSSLYERRFGPFFVSPVVAGLDPKTGQPFICGFDSIG-CIDF 119
Query: 138 A--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
A + + GT++ + L P + + I+ AL
Sbjct: 120 AKDFIVSGTASDQLFGMCESLWEPDLGPDELFETISQAL 158
>gi|154340181|ref|XP_001566047.1| putative proteasome beta 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063366|emb|CAM39542.1| putative proteasome beta 3 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 205
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GG+VMA+AG + +I SD R +S K+ + + G++G D +++
Sbjct: 8 GGSVMAMAGKECFVIISDKRLGEQLKTISMEVPKLHIVNDSVVYGLTGLRTDQQTFANKV 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVY--SYDP 130
+ IN + + ++ A M+ +LYE R P++V+ ++ ID T G VY + D
Sbjct: 68 EFRINMYKLREERDITGKAFAAMIESMLYEARFGPWFVEPVIGSIDKT-TGEVYLCATDL 126
Query: 131 VGH-CEKVAYRLHGTSAKFMLASMSYLLSP 159
+G CE Y GT+A+ + L P
Sbjct: 127 IGAPCEPEDYVCAGTAAESLHGMCEALWRP 156
>gi|407279633|ref|ZP_11108103.1| 20S proteasome subunit beta [Rhodococcus sp. P14]
Length = 288
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ LIA D R++ + S + K+F + +A GI+G ++E+V
Sbjct: 55 HGTTIVAVTFAGGVLIAGDRRATMGNMVASRDVQKVFVTDSYSAAGIAGTAGLAVELVRL 114
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G PL+ G A LS ++ + P V L D G
Sbjct: 115 FAVELEHYEKIEGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLEAPDPQRAG 174
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ SYD VG + E+ Y G+ + F +S+ L Y ++ D + +E L
Sbjct: 175 RIVSYDVVGGRYEERAGYHAVGSGSLFAKSSLKKL---YRADADQAAALRTVVEAL 227
>gi|378754521|gb|EHY64552.1| hypothetical protein NERG_02362 [Nematocida sp. 1 ERTm2]
Length = 204
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 63/121 (52%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG+ +A+ G D +I +D R +N + + +N +++++ ++ + ++G + D +
Sbjct: 7 YGGSSLAMVGKDAIVITADKRFGNNASTLHSNFTRLYKITDRIILSLTGFVPDCQVLYKT 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
L+ + ++ + + + +LS +LY +R P+ + L+ G D VY+ D +
Sbjct: 67 LRKHVTMFKLSQQREIEPKEFSSLLSYILYSKRFSPFLISPLIAGFDRENNPHVYTMDLI 126
Query: 132 G 132
G
Sbjct: 127 G 127
>gi|157871480|ref|XP_001684289.1| putative proteasome beta 3 subunit [Leishmania major strain
Friedlin]
gi|68127358|emb|CAJ04676.1| putative proteasome beta 3 subunit [Leishmania major strain
Friedlin]
Length = 205
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 13 GGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL 72
GG+VMA+AG + +I SD R +S K+ + N G++G D +++
Sbjct: 8 GGSVMAMAGKECFVIISDKRLGEQLKTISTEVPKLHVVNNSIVYGLTGLRTDQQTFANKV 67
Query: 73 QAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDPV 131
Q + + + ++ A M++ +LYE R P++V+ ++ ID TG+ + + D +
Sbjct: 68 QFRTDMYKLREERDITGKAFAAMITSMLYEARFGPWFVEPVIGSIDKSTGEVYLCATDLI 127
Query: 132 GH-CEKVAYRLHGTSAKFMLASMSYLLSP 159
G CE Y GT+A+ + L P
Sbjct: 128 GAPCEPEDYVCAGTAAESLHGMCEALWRP 156
>gi|344287597|ref|XP_003415539.1| PREDICTED: proteasome subunit beta type-2-like isoform 1 [Loxodonta
africana]
Length = 201
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Query: 16 VMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQAE 75
++ I GPD+ L+ASD ++SN + ++ K+F++ + + G D+++ +Q
Sbjct: 4 LIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKN 63
Query: 76 INRSAEAKGQPLSLPGTAEML--SLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPVGH 133
+ G LS A +L Y R PY+V +LL G D +Y D +
Sbjct: 64 VQLYKMRNGYELSPTAAANFTRRNLADYLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAA 123
Query: 134 CEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
K + HG A L+ + +P S +++ LEEL
Sbjct: 124 LAKAPFAAHGYGAFLTLSILDRYYTPTISRERAVELLRKCLEEL 167
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 14 GTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRL- 72
GT + I D ++A++ R + T+ S + K+F++ + + G +AD ++V++++
Sbjct: 10 GTAVGIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGIASIGILAD-MQVLTKIA 68
Query: 73 QAEINRSA-EAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
+A ++ A + K +P S+ A++LS +L+ R+ PY+V+VL+ G+D G ++ D +
Sbjct: 69 KAYMSLYALDTKTRP-SIRSAAKLLSYVLFANRVLPYFVEVLVGGVDDEGP-HLFIMDSL 126
Query: 132 GHCEKVAYRLHGTSAKFMLA 151
G + Y GT K +A
Sbjct: 127 GSLIEDDYAAVGTGTKLAIA 146
>gi|296269805|ref|YP_003652437.1| proteasome endopeptidase complex protein [Thermobispora bispora DSM
43833]
gi|296092592|gb|ADG88544.1| Proteasome endopeptidase complex [Thermobispora bispora DSM 43833]
Length = 278
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Query: 10 VQHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVV 69
+ H T++A+ ++A D R++S I + K+FR + + +GI+G + LEV
Sbjct: 47 IPHATTIVAVICDGGVVMAGDRRATSGNYISQRDIEKVFRADDYSCLGIAGTASIGLEVA 106
Query: 70 SRLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLV-----GID-GTGKG 123
+ E+ + +G+ LS G A L+ ++ R +Q L+V D TGKG
Sbjct: 107 RLFRVELEHYEKTEGRSLSTEGKAHRLATMI--RGNLGMAMQGLVVIPLFAAYDPATGKG 164
Query: 124 GVYSYD-PVGHCEKVAYRLHGTSAKFMLASMSYLLSP 159
++SYD G E+ Y G+ + F S+ L P
Sbjct: 165 RIFSYDVGGGPYEQYDYHAIGSGSIFARGSLKKLYRP 201
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 11 QHGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVS 70
+ G T + I D ++A+DT++S + + + N KI + ++ A+ +G++ D +
Sbjct: 4 KTGTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIAR 63
Query: 71 RLQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVG-IDGTGKGGVYSYD 129
L+AE G+P++ A +LS +L E + FPY VQ+++ G +D + + + D
Sbjct: 64 ILEAEARYYQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGGYVD---EPTIANLD 120
Query: 130 PVGHCEKVAYRLHGTSAKFMLA 151
P+G Y G+ F +A
Sbjct: 121 PLGGLIFDDYTATGSGTPFAIA 142
>gi|157112534|ref|XP_001651824.1| proteasome subunit beta type [Aedes aegypti]
gi|108878045|gb|EAT42270.1| AAEL006174-PA [Aedes aegypti]
Length = 205
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
+GG V+A+ G + IA+D R ++ + K+F + +G+ G D L V R
Sbjct: 7 NGGCVVAMKGKNCVAIATDHRFGVQAQTIATDFEKVFEINPHMYLGLVGLQTDILTVHQR 66
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYERRIFPYYVQVLLVGID-GTGKGGVYSYDP 130
L N + + ++ A MLS LYE+R PY+++ ++ G++ T + + + D
Sbjct: 67 LLFRKNLYEVRENREMTPERFAAMLSNFLYEKRFGPYFIEPVIAGLNPKTFEPFICNMDL 126
Query: 131 VGHCEKVA--YRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMAL 174
+G C + + + GT A+ + L P +VI+ AL
Sbjct: 127 IG-CPNMPNDFVVAGTCAEQLYGMCETLWKPDLEPEKLFEVISQAL 171
>gi|452956569|gb|EME61957.1| 20S proteasome subunit beta [Rhodococcus ruber BKS 20-38]
Length = 288
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Query: 12 HGGTVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSR 71
HG T++A+ LIA D R++ + S + K+F + +A GI+G ++E+V
Sbjct: 55 HGTTIVAVTFAGGVLIAGDRRATMGNMVASRDVQKVFVTDSYSAAGIAGTAGLAVELVRL 114
Query: 72 LQAEINRSAEAKGQPLSLPGTAEMLSLLLYER--------RIFPYYVQVLLVGIDGTGKG 123
E+ + +G PL+ G A LS ++ + P V L D G
Sbjct: 115 FAVELEHYEKIEGVPLTFDGKANRLSSMVRGNLGAAMQGLAVVPLLVGYDLEAPDPQHAG 174
Query: 124 GVYSYDPVG--HCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTDVITMALEEL 177
+ SYD VG + E+ Y G+ + F +S+ L Y ++ D + +E L
Sbjct: 175 RIVSYDVVGGRYEERAGYHAVGSGSLFAKSSLKKL---YRADADEAAALRTVVEAL 227
>gi|322801573|gb|EFZ22229.1| hypothetical protein SINV_11095 [Solenopsis invicta]
Length = 207
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 15 TVMAIAGPDFALIASDTRSSSNGTIVSNNQLKIFRLPNQTAVGISGNMADSLEVVSRLQA 74
++ I DF L+A+D ++ + ++ +++ KI ++ ++ + ISG D+ + +
Sbjct: 3 CLIGIQCKDFVLVAADMTTAQSIIVMKSDEHKIHKISDKLVMAISGESGDTTQFSEYIGK 62
Query: 75 EINRSAEAKGQPLSLPGTAEMLS---LLLYERRIFPYYVQVLLVGIDGTGKGGVYSYDPV 131
I G LS P A + L Y R PY+V +LL G D +Y D +
Sbjct: 63 NIQLYKMRNGYELS-PKAAACFTRRNLADYLRSRTPYFVNMLLAGYDDDSGPELYFIDYL 121
Query: 132 GHCEKVAYRLHGTSAKFMLASMSYLLSPYESEFDYTD 168
C +V Y HG F SMS L Y ++D T+
Sbjct: 122 ASCVRVPYATHGYGGMF---SMSVLDRYY--KYDCTE 153
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,757,381,220
Number of Sequences: 23463169
Number of extensions: 103457005
Number of successful extensions: 271679
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 1636
Number of HSP's that attempted gapping in prelim test: 269394
Number of HSP's gapped (non-prelim): 3093
length of query: 184
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 51
effective length of database: 9,238,593,890
effective search space: 471168288390
effective search space used: 471168288390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)