Query psy2803
Match_columns 141
No_of_seqs 106 out of 159
Neff 4.1
Searched_HMMs 13730
Date Fri Aug 16 17:21:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2803.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2803hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ewka_ c.93.1.1 (A:) Metabotr 97.2 0.00032 2.4E-08 56.4 6.3 44 30-74 44-88 (477)
2 d1dp4a_ c.93.1.1 (A:) Hormone 96.7 0.0018 1.3E-07 48.9 7.0 72 15-86 2-89 (425)
3 d1jdpa_ c.93.1.1 (A:) Hormone 95.4 0.0047 3.4E-07 45.9 3.2 74 12-86 4-94 (401)
4 d1usga_ c.93.1.1 (A:) Leucine- 90.2 0.38 2.7E-05 35.0 6.6 70 14-84 1-79 (346)
5 d1roaa_ d.17.1.2 (A:) Cystatin 65.7 5.7 0.00042 25.8 5.2 27 19-45 1-29 (111)
6 d1qo0a_ c.93.1.1 (A:) Amide re 64.6 5.3 0.00039 29.5 5.4 66 18-85 4-80 (373)
7 d1r4ca_ d.17.1.2 (A:) Cystatin 62.4 5 0.00037 25.9 4.3 22 24-45 8-29 (110)
8 d1cewi_ d.17.1.2 (I:) Cystatin 51.1 11 0.00076 24.1 4.4 22 24-45 8-29 (108)
9 d1kwia_ d.17.1.3 (A:) Cathelic 24.8 31 0.0023 21.4 3.3 25 29-53 4-29 (98)
10 d1eqka_ d.17.1.2 (A:) Phytocys 24.3 64 0.0047 20.3 4.9 29 17-45 8-39 (102)
No 1
>d1ewka_ c.93.1.1 (A:) Metabotropic glutamate receptor subtype 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.15 E-value=0.00032 Score=56.43 Aligned_cols=44 Identities=11% Similarity=-0.034 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhhhccc-CcceeEEEEEEeeCCCChhHHHHHHHHHH
Q psy2803 30 QSAFKFAMLTHNQNTT-TRRFELQAYVDVINTADAFKLSRLSIRKM 74 (141)
Q Consensus 30 ElAFk~AI~~IN~~k~-l~~f~L~p~I~~V~~~DSFeaSkkaC~ql 74 (141)
-.|+.|||++||++.. +|+++|-++|..- -+++..+-+.+.+++
T Consensus 44 ~~Am~~Aie~IN~~~~lLPn~tLg~~i~Dt-c~~~~~a~~~~~~~i 88 (477)
T d1ewka_ 44 VEAMFHTLDKINADPVLLPNITLGSEIRDS-CWHSSVALEQSIEFI 88 (477)
T ss_dssp HHHHHHHHHHHHHCSSSSTTCCEEEEEEEC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCCCCEEEEEEEEc-CCChHHHHHHHHHHH
Confidence 4599999999999887 4569999988642 245555555555543
No 2
>d1dp4a_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.74 E-value=0.0018 Score=48.95 Aligned_cols=72 Identities=7% Similarity=0.037 Sum_probs=51.3
Q ss_pred eeeEeEEec-CCC------hHHHHHHHHHHHHhhhcccC-cceeEEEEEEeeCC----CChhHHHHHHHHHH----HHHh
Q psy2803 15 HIGLGAIFE-QGT------DEVQSAFKFAMLTHNQNTTT-RRFELQAYVDVINT----ADAFKLSRLSIRKM----LVTN 78 (141)
Q Consensus 15 ~I~IGaIFd-~~d------~~~ElAFk~AI~~IN~~k~l-~~f~L~p~I~~V~~----~DSFeaSkkaC~ql----~~a~ 78 (141)
.|+||++|. .+. .....|+++||++||+.... +..+|...+..-.. .|...+...+++++ +.|+
T Consensus 2 ~i~vg~~lPltg~~~~~~~~~~~~A~~lAv~~IN~~~~~l~g~~l~~~~~D~~~~~~~~~~~~~~~~a~~~~~~~~V~ai 81 (425)
T d1dp4a_ 2 DLTVAVVLPLTNTSYPWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVCSDTAAPLAAVDLKWEHSPAVF 81 (425)
T ss_dssp EEEEEEEECSSCCCSTTCHHHHHHHHHHHHHHHHTCTTSSTTCEEEEEEEECBCTTSSBCTTHHHHHHHHHHHHHCCSEE
T ss_pred cEEEEEEECCCCcccccchhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEECCCcccccCHHHHHHHHHHHHhcCCCeEE
Confidence 689999996 332 34577999999999998764 45778777654321 25667777777776 5788
Q ss_pred cccCCCCC
Q psy2803 79 LMSLHSSP 86 (141)
Q Consensus 79 ~~~~~~~~ 86 (141)
+|+.+|..
T Consensus 82 iG~~~S~~ 89 (425)
T d1dp4a_ 82 LGPGCVYS 89 (425)
T ss_dssp ECCCSHHH
T ss_pred ECCCChHH
Confidence 99887744
No 3
>d1jdpa_ c.93.1.1 (A:) Hormone binding domain of the atrial natriuretic peptide receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.37 E-value=0.0047 Score=45.89 Aligned_cols=74 Identities=15% Similarity=0.082 Sum_probs=44.7
Q ss_pred ccceeeEeEEecCCC------hHHHHHHHHHHHHhhhcccC-----cceeEEEEEEeeCCCCh---hHHHHHHHHHH---
Q psy2803 12 VVHHIGLGAIFEQGT------DEVQSAFKFAMLTHNQNTTT-----RRFELQAYVDVINTADA---FKLSRLSIRKM--- 74 (141)
Q Consensus 12 ~p~~I~IGaIFd~~d------~~~ElAFk~AI~~IN~~k~l-----~~f~L~p~I~~V~~~DS---FeaSkkaC~ql--- 74 (141)
-|++|+||+|+..+. ..+..|+++||+.+|++... ...+++..+..- ..|+ ..+.+++|.+.
T Consensus 4 ~~~~i~igvllP~tg~~~~~~~~~~~a~~lAv~~iN~~g~~~~~~~~g~~i~~~~~D~-~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T d1jdpa_ 4 PPQKIEVLVLLPQDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDS-DCGNRALFSLVDRVAAARGAK 82 (401)
T ss_dssp CCCEEEEEEEECSSTTSTTCHHHHHHHHHHHHHHHCC-----CCSCTTCEEEEEEEEC-TTSTHHHHHHHHHHHHTTTCC
T ss_pred CCCccEEEEEECCCCchhhhhHHHHHHHHHHHHHHHhcCCccccCCCCcEEEEEEEeC-CCCHHHHHHHHHHHHHhccCC
Confidence 367999999998643 34677999999999986421 234555544432 1233 44444444432
Q ss_pred HHHhcccCCCCC
Q psy2803 75 LVTNLMSLHSSP 86 (141)
Q Consensus 75 ~~a~~~~~~~~~ 86 (141)
+.|++||.+|..
T Consensus 83 v~~iiG~~~s~~ 94 (401)
T d1jdpa_ 83 PDLILGPVCEYA 94 (401)
T ss_dssp CSEEECCCSHHH
T ss_pred cEEEECCCCcch
Confidence 457888877654
No 4
>d1usga_ c.93.1.1 (A:) Leucine-binding protein {Escherichia coli [TaxId: 562]}
Probab=90.15 E-value=0.38 Score=34.99 Aligned_cols=70 Identities=11% Similarity=0.016 Sum_probs=44.1
Q ss_pred ceeeEeEEecCC-C-----hHHHHHHHHHHHHhhhcccCcceeEEEEEEeeCCCChhHHHHHHHHHH---HHHhcccCCC
Q psy2803 14 HHIGLGAIFEQG-T-----DEVQSAFKFAMLTHNQNTTTRRFELQAYVDVINTADAFKLSRLSIRKM---LVTNLMSLHS 84 (141)
Q Consensus 14 ~~I~IGaIFd~~-d-----~~~ElAFk~AI~~IN~~k~l~~f~L~p~I~~V~~~DSFeaSkkaC~ql---~~a~~~~~~~ 84 (141)
+.|+||.|.+-. . .....+.+.|++.+|..-....-+++..+.. +..|.=.+.+++.+++ ..+++|+.++
T Consensus 1 d~I~IG~~~plsG~~a~~G~~~~~g~~lav~~iN~~ggi~G~~i~lv~~D-~~~~p~~a~~~~~~li~~~~~~vig~~~s 79 (346)
T d1usga_ 1 DDIKVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYD-DACDPKQAVAVANKIVNDGIKYVIGHLCS 79 (346)
T ss_dssp CCEEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEE-CTTCHHHHHHHHHHHHHTTCCEEECCSSH
T ss_pred CcEEEEEEeCCCCchHHhHHHHHHHHHHHHHHHHHcCCCCCcEEEEEEec-CCCCHHHHHHHHHHHHhcCCccccCCccC
Confidence 468999999852 2 3357799999999998643222244443332 3355666666677666 3456666554
No 5
>d1roaa_ d.17.1.2 (A:) Cystatin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.72 E-value=5.7 Score=25.78 Aligned_cols=27 Identities=30% Similarity=0.394 Sum_probs=21.4
Q ss_pred eEEec--CCChHHHHHHHHHHHHhhhccc
Q psy2803 19 GAIFE--QGTDEVQSAFKFAMLTHNQNTT 45 (141)
Q Consensus 19 GaIFd--~~d~~~ElAFk~AI~~IN~~k~ 45 (141)
||+.+ .++++++.|-++|++.+|+..+
T Consensus 1 GG~~~~~~~d~~v~~~~~~Av~~~N~~sn 29 (111)
T d1roaa_ 1 GGIHATDLNDKSVQRALDFAISEYNKVIN 29 (111)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHHHHHTTC
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 56554 4677889999999999998754
No 6
>d1qo0a_ c.93.1.1 (A:) Amide receptor/negative regulator of the amidase operon (AmiC) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=64.60 E-value=5.3 Score=29.49 Aligned_cols=66 Identities=11% Similarity=0.082 Sum_probs=39.1
Q ss_pred EeEEecCCC------hHHHHHHHHHHHHhhhcccCcceeEEEEEEeeCCCChhHHHHHHHHHH-----HHHhcccCCCC
Q psy2803 18 LGAIFEQGT------DEVQSAFKFAMLTHNQNTTTRRFELQAYVDVINTADAFKLSRLSIRKM-----LVTNLMSLHSS 85 (141)
Q Consensus 18 IGaIFd~~d------~~~ElAFk~AI~~IN~~k~l~~f~L~p~I~~V~~~DSFeaSkkaC~ql-----~~a~~~~~~~~ 85 (141)
||.++...- .....+.+.|++++|..-....-+++..+. +....=.....+.+.| +.+++|+++|.
T Consensus 4 IG~~~p~tG~~a~~G~~~~~g~~lAv~~iN~~GGi~Gr~i~l~~~--D~~~~~~~a~~~a~~Li~~~~V~aiiG~~~S~ 80 (373)
T d1qo0a_ 4 IGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQ--DPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSH 80 (373)
T ss_dssp EEEECCSSSTTHHHHHHHHHHHHHHHHHHHHTTCBTTBCCEEEEE--CCTTCHHHHHHHHHHHHHHSCCCEEEECCSHH
T ss_pred EEEEcCCcCchhhhhHHHHHHHHHHHHHHHhcCCcCCeEEEEEEE--cCCCCHHHHHHHHHHHHhhCCceEEEechhhh
Confidence 899997532 346789999999999864222113333322 3332334445555555 35788887764
No 7
>d1r4ca_ d.17.1.2 (A:) Cystatin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.42 E-value=5 Score=25.85 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=18.7
Q ss_pred CCChHHHHHHHHHHHHhhhccc
Q psy2803 24 QGTDEVQSAFKFAMLTHNQNTT 45 (141)
Q Consensus 24 ~~d~~~ElAFk~AI~~IN~~k~ 45 (141)
.+++++..|-++|++.+|+..+
T Consensus 8 ~~d~~v~~~~~~Av~~~N~~s~ 29 (110)
T d1r4ca_ 8 VEEEGVRRALDFAVGEYNKASN 29 (110)
T ss_dssp TTSHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHHhhCC
Confidence 3678889999999999998764
No 8
>d1cewi_ d.17.1.2 (I:) Cystatin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=51.06 E-value=11 Score=24.10 Aligned_cols=22 Identities=27% Similarity=0.477 Sum_probs=18.9
Q ss_pred CCChHHHHHHHHHHHHhhhccc
Q psy2803 24 QGTDEVQSAFKFAMLTHNQNTT 45 (141)
Q Consensus 24 ~~d~~~ElAFk~AI~~IN~~k~ 45 (141)
.++++++.+-++|++.+|+..+
T Consensus 8 ~~d~~v~~~~~~Av~~~N~~s~ 29 (108)
T d1cewi_ 8 ENDEGLQRALQFAMAEYNRASN 29 (108)
T ss_dssp TTCHHHHHHHHHHTHHHHTTSC
T ss_pred CCCHHHHHHHHHHHHHHHhcCC
Confidence 4678889999999999998765
No 9
>d1kwia_ d.17.1.3 (A:) Cathelicidin motif of protegrin-3 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=24.80 E-value=31 Score=21.43 Aligned_cols=25 Identities=16% Similarity=0.167 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHhhhcccCcc-eeEEE
Q psy2803 29 VQSAFKFAMLTHNQNTTTRR-FELQA 53 (141)
Q Consensus 29 ~ElAFk~AI~~IN~~k~l~~-f~L~p 53 (141)
.+.|-.+|++.+|...+... |+|.-
T Consensus 4 y~eav~~Al~~~N~~s~~~~~f~l~~ 29 (98)
T d1kwia_ 4 YREAVLRAVDRLNEQSSEANLYRLLE 29 (98)
T ss_dssp HHHHHHHHHHHHHHHCCSSEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCcccEEEEE
Confidence 46789999999999876544 66643
No 10
>d1eqka_ d.17.1.2 (A:) Phytocystatin {Japanese rice (Oryza sativa), subsp. japonica, oryzacystatin-I [TaxId: 4530]}
Probab=24.26 E-value=64 Score=20.26 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=23.2
Q ss_pred eEeEEec---CCChHHHHHHHHHHHHhhhccc
Q psy2803 17 GLGAIFE---QGTDEVQSAFKFAMLTHNQNTT 45 (141)
Q Consensus 17 ~IGaIFd---~~d~~~ElAFk~AI~~IN~~k~ 45 (141)
..||+.+ .++++...+.++|+..+|+..+
T Consensus 8 l~GG~~~i~d~nd~~v~e~a~~Av~~~N~~~~ 39 (102)
T d1eqka_ 8 VLGGVEPVGNENDLHLVDLARFAVTEHNKKAN 39 (102)
T ss_dssp CSSSSEEECCTTCHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCcccCCCCCCHHHHHHHHHHHHHHhhcCC
Confidence 4677754 4778889999999999998753
Done!