BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2804
(94 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P19491|GRIA2_RAT Glutamate receptor 2 OS=Rattus norvegicus GN=Gria2 PE=1 SV=2
Length = 883
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S++ S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 775 NEQGLLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIE 834
Query: 72 FCYNTHMEASNNKVSTIPNNID 93
FCY + EA KV+ P NI+
Sbjct: 835 FCYKSRAEAKRMKVAKNPQNIN 856
>sp|Q9Z2W8|GRIA4_MOUSE Glutamate receptor 4 OS=Mus musculus GN=Gria4 PE=1 SV=2
Length = 902
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQC--KSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
+ AG L +L+ KWW D +C K S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 776 SEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 72 FCYNTHMEASNNKVS 86
FCY + EA K++
Sbjct: 836 FCYKSRAEAKRMKLT 850
>sp|P48058|GRIA4_HUMAN Glutamate receptor 4 OS=Homo sapiens GN=GRIA4 PE=2 SV=2
Length = 902
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQC--KSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
+ AG L +L+ KWW D +C K S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 776 SEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 72 FCYNTHMEASNNKVS 86
FCY + EA K++
Sbjct: 836 FCYKSRAEAKRMKLT 850
>sp|Q5R4M0|GRIA2_PONAB Glutamate receptor 2 OS=Pongo abelii GN=GRIA2 PE=2 SV=1
Length = 883
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
Query: 9 FGNPPNNA-------GELSRLQKKWWIDTSQC--KSSKSQDTHSELALSNVAGVFYILGA 59
G P N A G L +L+ KWW D +C K S S++ S L+LSNVAGVFYIL
Sbjct: 763 LGTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVG 822
Query: 60 GLLLAMAVALVEFCYNTHMEASNNKVSTIPNNID 93
GL LAM VAL+EFCY + EA KV+ NI+
Sbjct: 823 GLGLAMLVALIEFCYKSRAEAKRMKVAKNAQNIN 856
>sp|Q38PU7|GRIA2_MACFA Glutamate receptor 2 OS=Macaca fascicularis GN=GRIA2 PE=2 SV=1
Length = 883
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S++ S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 775 NEQGLLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIE 834
Query: 72 FCYNTHMEASNNKVSTIPNNID 93
FCY + EA KV+ NI+
Sbjct: 835 FCYKSRAEAKRMKVAKNAQNIN 856
>sp|P42262|GRIA2_HUMAN Glutamate receptor 2 OS=Homo sapiens GN=GRIA2 PE=1 SV=3
Length = 883
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S++ S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 775 NEQGLLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIE 834
Query: 72 FCYNTHMEASNNKVSTIPNNID 93
FCY + EA KV+ NI+
Sbjct: 835 FCYKSRAEAKRMKVAKNAQNIN 856
>sp|P23819|GRIA2_MOUSE Glutamate receptor 2 OS=Mus musculus GN=Gria2 PE=1 SV=3
Length = 883
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S++ S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 775 NEQGLLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIE 834
Query: 72 FCYNTHMEASNNKVSTIPNNID 93
FCY + EA KV+ NI+
Sbjct: 835 FCYKSRAEAKRMKVAKNAQNIN 856
>sp|Q38PU5|GRIA4_MACFA Glutamate receptor 4 OS=Macaca fascicularis GN=GRIA4 PE=2 SV=1
Length = 902
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 776 NEPGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 72 FCYNTHMEASNNKVS 86
FCY + EA K++
Sbjct: 836 FCYKSRAEAKRMKLT 850
>sp|P19493|GRIA4_RAT Glutamate receptor 4 OS=Rattus norvegicus GN=Gria4 PE=1 SV=1
Length = 902
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 776 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMLVALIE 835
Query: 72 FCYNTHMEASNNKVS 86
FCY + EA K++
Sbjct: 836 FCYKSRAEAKRMKLT 850
>sp|Q9Z2W9|GRIA3_MOUSE Glutamate receptor 3 OS=Mus musculus GN=Gria3 PE=1 SV=2
Length = 888
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 17 GELSRLQKKWWIDTSQC--KSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCY 74
G L +L+ KWW D +C K S S+D S L+LSNVAGVFYIL GL LAM VAL+EFCY
Sbjct: 783 GILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCY 842
Query: 75 NTHMEASNNKVS 86
+ E+ K++
Sbjct: 843 KSRAESKRMKLT 854
>sp|P19492|GRIA3_RAT Glutamate receptor 3 OS=Rattus norvegicus GN=Gria3 PE=1 SV=1
Length = 888
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 780 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 839
Query: 72 FCYNTHMEASNNKVS 86
FCY + E+ K++
Sbjct: 840 FCYKSRAESKRMKLT 854
>sp|P42263|GRIA3_HUMAN Glutamate receptor 3 OS=Homo sapiens GN=GRIA3 PE=1 SV=2
Length = 894
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 786 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 845
Query: 72 FCYNTHMEASNNKVS 86
FCY + E+ K++
Sbjct: 846 FCYKSRAESKRMKLT 860
>sp|P23818|GRIA1_MOUSE Glutamate receptor 1 OS=Mus musculus GN=Gria1 PE=1 SV=1
Length = 907
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 17 GELSRLQKKWWIDTSQC--KSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCY 74
G L +L+ KWW D +C K S S+D S L+LSNVAGVFYIL GL LAM VAL+EFCY
Sbjct: 771 GVLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCY 830
Query: 75 NTHMEASNNK 84
+ E+ K
Sbjct: 831 KSRSESKRMK 840
>sp|P19490|GRIA1_RAT Glutamate receptor 1 OS=Rattus norvegicus GN=Gria1 PE=1 SV=2
Length = 907
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 72 FCYNTHMEASNNK 84
FCY + E+ K
Sbjct: 828 FCYKSRSESKRMK 840
>sp|Q38PU6|GRIA3_MACFA Glutamate receptor 3 OS=Macaca fascicularis GN=GRIA3 PE=2 SV=1
Length = 894
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSSK--SQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C + S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 786 NEQGLLDKLKNKWWYDKGECGTGGCGSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIE 845
Query: 72 FCYNTHMEASNNKVS 86
FCY + E+ K++
Sbjct: 846 FCYKSRAESKRMKLT 860
>sp|Q38PU8|GRIA1_MACFA Glutamate receptor 1 OS=Macaca fascicularis GN=GRIA1 PE=2 SV=1
Length = 906
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 72 FCYNTHMEASNNK 84
FCY + E+ K
Sbjct: 828 FCYKSRSESKRMK 840
>sp|P42261|GRIA1_HUMAN Glutamate receptor 1 OS=Homo sapiens GN=GRIA1 PE=1 SV=2
Length = 906
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSS--KSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE 71
N G L +L+ KWW D +C S S+D S L+LSNVAGVFYIL GL LAM VAL+E
Sbjct: 768 NEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIE 827
Query: 72 FCYNTHMEASNNK 84
FCY + E+ K
Sbjct: 828 FCYKSRSESKRMK 840
>sp|Q03445|GLK1_DROME Glutamate receptor 1 OS=Drosophila melanogaster GN=Glu-RI PE=2 SV=2
Length = 991
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVE-FCYN 75
GEL R++ KWW D ++C + T +EL+LSNVAG++YIL GLLLA+ VA++E FC N
Sbjct: 863 GELLRIRNKWWFDKTECNLDQETSTPNELSLSNVAGIYYILIGGLLLAVIVAIMEFFCRN 922
>sp|Q10914|GLR2_CAEEL Glutamate receptor 2 OS=Caenorhabditis elegans GN=glr-2 PE=1 SV=3
Length = 977
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQD-THSELALSNVAGVFYILGAGLLLAMAVALVEFCYN 75
GEL +L+ KWW D QC + S T S L LS VAG+FYIL AG++L+M ALVEF +
Sbjct: 865 GELKKLENKWWYDRGQCDTGTSDGGTSSSLNLSKVAGIFYILLAGMVLSMCTALVEFLFR 924
Query: 76 THME 79
+ E
Sbjct: 925 KNKE 928
>sp|P34299|GLR1_CAEEL Glutamate receptor 1 OS=Caenorhabditis elegans GN=glr-1 PE=1 SV=2
Length = 962
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQD-THSELALSNVAGVFYILGAGLLLAMAVALVEFCYN 75
GEL +L+ KWW D QC + + D + + L LS VAG+FYIL G++++M AL EF Y
Sbjct: 822 GELKKLENKWWYDRGQCDAGITVDGSSASLNLSKVAGIFYILMGGMVISMLAALGEFLYR 881
Query: 76 THMEA----SNNKVSTIPNNI 92
+ +EA SN+ V+ N+
Sbjct: 882 SRIEARKSNSNSMVANFAKNL 902
>sp|P26591|GLRK_LYMST Glutamate receptor OS=Lymnaea stagnalis PE=2 SV=1
Length = 917
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 17 GELSRLQKKWWIDTSQC--KSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCY 74
G+L++ +K W+ D +C SS + S L L+NVAG+FYIL GL++A+ A EF Y
Sbjct: 785 GDLAKWEKIWF-DRGECPQHSSNKEGAQSALTLANVAGIFYILIGGLVVAVLSAAFEFLY 843
Query: 75 NTHMEASNNKVS 86
+ M++ +++S
Sbjct: 844 KSRMDSRKSRMS 855
>sp|Q13002|GRIK2_HUMAN Glutamate receptor ionotropic, kainate 2 OS=Homo sapiens GN=GRIK2
PE=1 SV=1
Length = 908
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNT 76
G+L +++KWW + C +S++ S L + N+ G+F +L AGL+L++ VA+ EF Y +
Sbjct: 789 GKLHMMKEKWW-RGNGCPEEESKEA-SALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKS 846
Query: 77 HMEASNNKVS 86
A K S
Sbjct: 847 KKNAQLEKRS 856
>sp|P39087|GRIK2_MOUSE Glutamate receptor ionotropic, kainate 2 OS=Mus musculus GN=Grik2
PE=1 SV=4
Length = 908
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNT 76
G+L +++KWW + C +S++ S L + N+ G+F +L AGL+L++ VA+ EF Y +
Sbjct: 789 GKLHMMKEKWW-RGNGCPEEESKEA-SALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKS 846
Query: 77 HMEASNNKVS 86
A K S
Sbjct: 847 KKNAQLEKRS 856
>sp|Q38PU3|GRIK2_MACFA Glutamate receptor ionotropic, kainate 2 OS=Macaca fascicularis
GN=GRIK2 PE=2 SV=1
Length = 908
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNT 76
G+L +++KWW + C +S++ S L + N+ G+F +L AGL+L++ VA+ EF Y +
Sbjct: 789 GKLHMMKEKWW-RGNGCPEEESKEA-SALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKS 846
Query: 77 HMEASNNKVS 86
A K S
Sbjct: 847 KKNAQLEKRS 856
>sp|P42260|GRIK2_RAT Glutamate receptor ionotropic, kainate 2 OS=Rattus norvegicus
GN=Grik2 PE=1 SV=2
Length = 908
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNT 76
G+L +++KWW + C +S++ S L + N+ G+F +L AGL+L++ VA+ EF Y +
Sbjct: 789 GKLHMMKEKWW-RGNGCPEEESKEA-SALGVQNIGGIFIVLAAGLVLSVFVAVGEFLYKS 846
Query: 77 HMEASNNKVS 86
A K S
Sbjct: 847 KKNAQLEKRS 856
>sp|Q63273|GRIK5_RAT Glutamate receptor ionotropic, kainate 5 OS=Rattus norvegicus
GN=Grik5 PE=1 SV=1
Length = 979
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSSKSQDTHSE-LALSNVAGVFYILGAGLLLAMAVALVEF 72
NN E+ L++KWW + +C K +D ++ L + N+ G+F +L GL++A+ VA++EF
Sbjct: 772 NNRLEI--LKRKWW-EGGRC--PKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEF 826
Query: 73 CYNTHMEASNNKVS 86
++T A + +VS
Sbjct: 827 IWSTRRSAESEEVS 840
>sp|Q61626|GRIK5_MOUSE Glutamate receptor ionotropic, kainate 5 OS=Mus musculus GN=Grik5
PE=2 SV=2
Length = 979
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSSKSQDTHSE-LALSNVAGVFYILGAGLLLAMAVALVEF 72
NN E+ L++KWW + +C K +D ++ L + N+ G+F +L GL++A+ VA++EF
Sbjct: 772 NNRLEI--LKRKWW-EGGRC--PKEEDHRAKGLGMENIGGIFVVLICGLIIAVFVAVMEF 826
Query: 73 CYNTHMEASNNKVS 86
++T A + +VS
Sbjct: 827 IWSTRRSAESEEVS 840
>sp|Q16478|GRIK5_HUMAN Glutamate receptor ionotropic, kainate 5 OS=Homo sapiens GN=GRIK5
PE=2 SV=2
Length = 980
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSSKSQDTHSE-LALSNVAGVFYILGAGLLLAMAVALVEF 72
NN E+ L++KWW + +C K +D ++ L + N+ G+F +L GL++A+ VA++EF
Sbjct: 772 NNRLEI--LKRKWW-EGGRC--PKEEDHRAKGLGMENIGGIFIVLICGLIIAVFVAVMEF 826
Query: 73 CYNTHMEASNNKVS 86
++T A + +VS
Sbjct: 827 IWSTRRSAESEEVS 840
>sp|Q91755|GRIK2_XENLA Glutamate receptor ionotropic, kainate 2 (Fragment) OS=Xenopus
laevis GN=grik2 PE=2 SV=1
Length = 285
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFC 73
G L +++KWW + C +S++ S L + N+ G+F +L AGL+L++ VA+ EF
Sbjct: 163 QEEGVLHMMKEKWW-RGNGCPEEESKEA-SALGVQNIGGIFIVLAAGLVLSVFVAVGEFL 220
Query: 74 YNTHMEASNNKVS 86
Y + A K S
Sbjct: 221 YKSKKNAQLEKRS 233
>sp|P22756|GRIK1_RAT Glutamate receptor ionotropic, kainate 1 OS=Rattus norvegicus
GN=Grik1 PE=1 SV=3
Length = 949
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNT 76
G+L +++KWW + C S++ S L + N+ G+F +L AGL+L++ VA+ EF Y +
Sbjct: 804 GKLHMMKEKWW-RGNGCPEEDSKEA-SALGVENIGGIFIVLAAGLVLSVFVAIGEFLYKS 861
Query: 77 HMEASNNKV 85
NN V
Sbjct: 862 R---KNNDV 867
>sp|O43424|GRID2_HUMAN Glutamate receptor ionotropic, delta-2 OS=Homo sapiens GN=GRID2
PE=2 SV=2
Length = 1007
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSE---LALSNVAGVFYILGAGLLLAMAVALVEFC 73
G++ L+ KWW QC S DT + L + + AGVF IL AG++L+ +A++E
Sbjct: 795 GDMDILKHKWWPKNGQCDLYSSVDTKQKGGALDIKSFAGVFCILAAGIVLSCFIAMLETW 854
Query: 74 YNTHMEASNNKVSTIPNNID 93
+N K S +P+ D
Sbjct: 855 WN------KRKGSRVPSKED 868
>sp|Q38PU4|GRIK1_MACFA Glutamate receptor ionotropic, kainate 1 OS=Macaca fascicularis
GN=GRIK1 PE=2 SV=1
Length = 918
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNT 76
G+L +++KWW + C +++ S L + N+ G+F +L AGL+L++ VA+ EF Y +
Sbjct: 804 GKLHMMKEKWW-RGNGCPEEDNKEA-SALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKS 861
Query: 77 H 77
Sbjct: 862 R 862
>sp|P39086|GRIK1_HUMAN Glutamate receptor ionotropic, kainate 1 OS=Homo sapiens GN=GRIK1
PE=1 SV=1
Length = 918
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNT 76
G+L +++KWW + C +++ S L + N+ G+F +L AGL+L++ VA+ EF Y +
Sbjct: 804 GKLHMMKEKWW-RGNGCPEEDNKEA-SALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKS 861
Query: 77 H 77
Sbjct: 862 R 862
>sp|Q63226|GRID2_RAT Glutamate receptor ionotropic, delta-2 OS=Rattus norvegicus
GN=Grid2 PE=1 SV=2
Length = 1007
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSSKSQDTHSE---LALSNVAGVFYILGAGLLLAMAVALV 70
+G++ L+ KWW QC S D + L + ++AGVF IL AG++L+ +A++
Sbjct: 792 QQSGDMDILKHKWWPKNGQCDLYSSVDAKQKGGALDIKSLAGVFCILAAGIVLSCLIAVL 851
Query: 71 EFCYNTHMEASNNKVSTIPNNID 93
E + S K S +P+ D
Sbjct: 852 ETWW------SRRKGSRVPSKED 868
>sp|Q61625|GRID2_MOUSE Glutamate receptor ionotropic, delta-2 OS=Mus musculus GN=Grid2
PE=1 SV=1
Length = 1007
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 14 NNAGELSRLQKKWWIDTSQCKSSKSQDTHSE---LALSNVAGVFYILGAGLLLAMAVALV 70
+G++ L+ KWW QC S D + L + ++AGVF IL AG++L+ +A++
Sbjct: 792 QQSGDMDILKHKWWPKNGQCDLYSSVDAKQKGGALDIKSLAGVFCILAAGIVLSCLIAVL 851
Query: 71 EFCYNTHMEASNNKVSTIPNNID 93
E + S K S +P+ D
Sbjct: 852 ETWW------SRRKGSRVPSKED 868
>sp|Q13003|GRIK3_HUMAN Glutamate receptor ionotropic, kainate 3 OS=Homo sapiens GN=GRIK3
PE=2 SV=3
Length = 919
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 18 ELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNTH 77
+L +++KWW S C ++++ S L + + G+F +L AGL+L++ VA+ EF Y
Sbjct: 791 KLHIMKEKWW-RGSGCPEEENKEA-SALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLR 848
Query: 78 MEASNNKVS 86
A + S
Sbjct: 849 KTAEREQRS 857
>sp|Q38PU2|GRIK3_MACFA Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis
GN=GRIK3 PE=2 SV=1
Length = 919
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 18 ELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNTH 77
+L +++KWW S C ++++ S L + + G+F +L AGL+L++ VA+ EF Y
Sbjct: 791 KLHIMKEKWW-RGSGCPEEENKEA-SALGIQKIGGIFIVLAAGLVLSVLVAVGEFVYKLR 848
Query: 78 MEASNNKVS 86
A + S
Sbjct: 849 KTAEREQRS 857
>sp|B1AS29|GRIK3_MOUSE Glutamate receptor ionotropic, kainate 3 OS=Mus musculus GN=Grik3
PE=2 SV=1
Length = 919
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 18 ELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNTH 77
+L +++KWW S C ++++ S L + + G+F +L AGL+L++ VA+ EF Y
Sbjct: 791 KLHIMKEKWW-RGSGCPEEENKEA-SALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLR 848
Query: 78 MEASNNKVS 86
A + S
Sbjct: 849 KTAEREQRS 857
>sp|P42264|GRIK3_RAT Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus
GN=Grik3 PE=1 SV=1
Length = 919
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 18 ELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCYNTH 77
+L +++KWW S C ++++ S L + + G+F +L AGL+L++ VA+ EF Y
Sbjct: 791 KLHIMKEKWW-RGSGCPEEENKEA-SALGIQKIGGIFIVLAAGLVLSVLVAVGEFIYKLR 848
Query: 78 MEASNNKVS 86
A + S
Sbjct: 849 KTAEREQRS 857
>sp|Q01812|GRIK4_RAT Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus
GN=Grik4 PE=2 SV=1
Length = 956
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 18 ELSRLQKKWWIDTSQCKSSKSQDTHSE-LALSNVAGVFYILGAGLLLAMAVALVEFCYN- 75
L L++KWW + +C K +D ++ L + N+ G+F +L GL++A+ +A++EF +
Sbjct: 775 RLEILKRKWW-EGGKC--PKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFLWTL 831
Query: 76 THMEASNNKV 85
H EAS V
Sbjct: 832 RHSEASEVSV 841
>sp|Q8BMF5|GRIK4_MOUSE Glutamate receptor ionotropic, kainate 4 OS=Mus musculus GN=Grik4
PE=2 SV=2
Length = 956
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 18 ELSRLQKKWWIDTSQCKSSKSQDTHSE-LALSNVAGVFYILGAGLLLAMAVALVEFCYN- 75
L L++KWW + +C K +D ++ L + N+ G+F +L GL++A+ +A++EF +
Sbjct: 775 RLEILKRKWW-EGGKC--PKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFLWTL 831
Query: 76 THMEASNNKV 85
H EAS V
Sbjct: 832 RHSEASEVSV 841
>sp|Q01097|NMDE2_MOUSE Glutamate receptor ionotropic, NMDA 2B OS=Mus musculus GN=Grin2b
PE=1 SV=3
Length = 1482
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEF 72
GE+ L+ W T C + K++ S+L + N+AGVFY+LGA AMA++L+ F
Sbjct: 787 GEMEELEALWL--TGICHNEKNEVMSSQLDIDNMAGVFYMLGA----AMALSLITF 836
>sp|Q00960|NMDE2_RAT Glutamate receptor ionotropic, NMDA 2B OS=Rattus norvegicus
GN=Grin2b PE=1 SV=1
Length = 1482
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEF 72
GE+ L+ W T C + K++ S+L + N+AGVFY+LGA AMA++L+ F
Sbjct: 787 GEMEELEALWL--TGICHNEKNEVMSSQLDIDNMAGVFYMLGA----AMALSLITF 836
>sp|Q13224|NMDE2_HUMAN Glutamate receptor ionotropic, NMDA 2B OS=Homo sapiens GN=GRIN2B
PE=1 SV=3
Length = 1484
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEF 72
GE+ L+ W T C + K++ S+L + N+AGVFY+LGA AMA++L+ F
Sbjct: 787 GEMEELEALWL--TGICHNEKNEVMSSQLDIDNMAGVFYMLGA----AMALSLITF 836
>sp|Q5R1P3|NMDE2_CANFA Glutamate receptor ionotropic, NMDA 2B OS=Canis familiaris
GN=GRIN2B PE=2 SV=1
Length = 1485
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEF 72
GE+ L+ W T C + K++ S+L + N+AGVFY+LGA AMA++L+ F
Sbjct: 787 GEMEELEALWL--TGICHNEKNEVMSSQLDIDNMAGVFYMLGA----AMALSLITF 836
>sp|Q5IS46|GRIK4_PANTR Glutamate receptor ionotropic, kainate 4 OS=Pan troglodytes
GN=GRIK4 PE=2 SV=1
Length = 956
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 18 ELSRLQKKWWIDTSQCKSSKSQDTHSE-LALSNVAGVFYILGAGLLLAMAVALVEFCYN- 75
L L++KWW + +C K +D ++ L + N+ G+F +L GL++A+ +A++EF +
Sbjct: 775 RLEILKRKWW-EGGKC--PKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFLWTL 831
Query: 76 THMEASNNKV 85
H EA+ V
Sbjct: 832 RHSEATEVSV 841
>sp|Q16099|GRIK4_HUMAN Glutamate receptor ionotropic, kainate 4 OS=Homo sapiens GN=GRIK4
PE=2 SV=2
Length = 956
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 18 ELSRLQKKWWIDTSQCKSSKSQDTHSE-LALSNVAGVFYILGAGLLLAMAVALVEFCYN- 75
L L++KWW + +C K +D ++ L + N+ G+F +L GL++A+ +A++EF +
Sbjct: 775 RLEILKRKWW-EGGKC--PKEEDHRAKGLGMENIGGIFVVLICGLIVAIFMAMLEFLWTL 831
Query: 76 THMEASNNKV 85
H EA+ V
Sbjct: 832 RHSEATEVSV 841
>sp|Q00959|NMDE1_RAT Glutamate receptor ionotropic, NMDA 2A OS=Rattus norvegicus
GN=Grin2a PE=1 SV=2
Length = 1464
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCY 74
GE+ L+ W T C + K++ S+L + N+AGVFY+L A AMA++L+ F +
Sbjct: 786 GEMEELETLWL--TGICHNEKNEVMSSQLDIDNMAGVFYMLAA----AMALSLITFIW 837
>sp|Q12879|NMDE1_HUMAN Glutamate receptor ionotropic, NMDA 2A OS=Homo sapiens GN=GRIN2A
PE=1 SV=1
Length = 1464
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCY 74
GE+ L+ W T C + K++ S+L + N+AGVFY+L A AMA++L+ F +
Sbjct: 786 GEMEELETLWL--TGICHNEKNEVMSSQLDIDNMAGVFYMLAA----AMALSLITFIW 837
>sp|P35436|NMDE1_MOUSE Glutamate receptor ionotropic, NMDA 2A OS=Mus musculus GN=Grin2a
PE=1 SV=2
Length = 1464
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 17 GELSRLQKKWWIDTSQCKSSKSQDTHSELALSNVAGVFYILGAGLLLAMAVALVEFCY 74
GE+ L+ W T C + K++ S+L + N+AGVFY+L A AMA++L+ F +
Sbjct: 786 GEMEELETLWL--TGICHNEKNEVMSSQLDIDNMAGVFYMLAA----AMALSLITFIW 837
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,696,075
Number of Sequences: 539616
Number of extensions: 1022837
Number of successful extensions: 2551
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2444
Number of HSP's gapped (non-prelim): 90
length of query: 94
length of database: 191,569,459
effective HSP length: 64
effective length of query: 30
effective length of database: 157,034,035
effective search space: 4711021050
effective search space used: 4711021050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)