BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2807
(288 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29RK2|PYC_BOVIN Pyruvate carboxylase, mitochondrial OS=Bos taurus GN=PC PE=2 SV=2
Length = 1178
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 119/231 (51%), Gaps = 42/231 (18%)
Query: 62 FPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSL------------------------KDHT 97
FP+SV F QG IG P+ GFP+ L+ KVL L + H
Sbjct: 940 FPRSVVEFLQGYIGIPHGGFPEPLRSKVLKDLPRVEGRPGASLPPLDLQALEKELTERHG 999
Query: 98 LDRKPECDL---MMED----------EFGPVDRLPTRIFLNGPNIGEEFSCEFKTGDTAY 144
+ PE L M D FGP+D L TR+FL GP I EEF E + G T +
Sbjct: 1000 EEVTPEDVLSAAMYPDVFAHFKDFTATFGPLDSLNTRLFLQGPKIAEEFEVELERGKTLH 1059
Query: 145 VTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRSKADSDTAGEIGAPMPG 204
+ L+IS+ LN G+R VFF NGQLRS+L++D K++ KA D G+IGAPMPG
Sbjct: 1060 IKALAISD-LNRAGQRQVFFELNGQLRSILVKDTQAMKEMHFHPKALKDVKGQIGAPMPG 1118
Query: 205 NIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG----VHKVRSSNLD 251
+I++K G +V K L V+S MK ET++ + +G VH + L+
Sbjct: 1119 KVIDIKVAAGAKVTKGQPLCVLSAMKMETVVTSPVEGTVRKVHVTKDMTLE 1169
>sp|P11498|PYC_HUMAN Pyruvate carboxylase, mitochondrial OS=Homo sapiens GN=PC PE=1 SV=2
Length = 1178
Score = 142 bits (357), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 120/232 (51%), Gaps = 44/232 (18%)
Query: 62 FPKSVSAFFQGSIGEPYQGFPKKLQEKVLG-------------------SLKDHTLDRKP 102
FP+SV F QG IG P+ GFP+ + KVL +L+ +DR
Sbjct: 940 FPRSVVEFLQGYIGVPHGGFPEPFRSKVLKDLPRVEGRPGASLPPLDLQALEKELVDRHG 999
Query: 103 ECDLMMED-------------------EFGPVDRLPTRIFLNGPNIGEEFSCEFKTGDTA 143
E ++ ED FGP+D L TR+FL GP I EEF E + G T
Sbjct: 1000 E-EVTPEDVLSAAMYPDVFAHFKDFTATFGPLDSLNTRLFLQGPKIAEEFEVELERGKTL 1058
Query: 144 YVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRSKADSDTAGEIGAPMP 203
++ L++S+ LN G+R VFF NGQLRS+L++D K++ KA D G+IGAPMP
Sbjct: 1059 HIKALAVSD-LNRAGQRQVFFELNGQLRSILVKDTQAMKEMHFHPKALKDVKGQIGAPMP 1117
Query: 204 GNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG----VHKVRSSNLD 251
G +I++K G +V K L V+S MK ET++ + +G VH + L+
Sbjct: 1118 GKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLE 1169
>sp|Q05920|PYC_MOUSE Pyruvate carboxylase, mitochondrial OS=Mus musculus GN=Pc PE=1 SV=1
Length = 1178
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 119/231 (51%), Gaps = 42/231 (18%)
Query: 62 FPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSL--------------------KD----HT 97
FP+SV F QG IG P+ GFP+ + KVL L KD H
Sbjct: 940 FPRSVVEFLQGYIGIPHGGFPEPFRSKVLKDLPRIEGRPGASLPPLNLKELEKDLIDRHG 999
Query: 98 LDRKPECDL---MMED----------EFGPVDRLPTRIFLNGPNIGEEFSCEFKTGDTAY 144
+ PE L M D FGP+D L TR+FL GP I EEF E + G T +
Sbjct: 1000 EEVTPEDVLSAAMYPDVFAQFKDFTATFGPLDSLNTRLFLQGPKIAEEFEVELERGKTLH 1059
Query: 145 VTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRSKADSDTAGEIGAPMPG 204
+ L++S+ LN G+R VFF NGQLRS+L++D K++ KA D G+IGAPMPG
Sbjct: 1060 IKALAVSD-LNRAGQRQVFFELNGQLRSILVKDTQAMKEMHFHPKALKDVKGQIGAPMPG 1118
Query: 205 NIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG----VHKVRSSNLD 251
+I++K G +V K L V+S MK ET++ + +G VH + L+
Sbjct: 1119 KVIDIKVAAGDKVAKGQPLCVLSAMKMETVVTSPMEGTIRKVHVTKDMTLE 1169
>sp|P52873|PYC_RAT Pyruvate carboxylase, mitochondrial OS=Rattus norvegicus GN=Pc PE=1
SV=2
Length = 1178
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 119/231 (51%), Gaps = 42/231 (18%)
Query: 62 FPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSL--------------------KD----HT 97
FP+SV F QG IG P+ GFP+ + KVL L KD H
Sbjct: 940 FPRSVVEFLQGYIGIPHGGFPEPFRSKVLKDLPRIEGRPGASLPPLNLKELEKDLIDRHG 999
Query: 98 LDRKPECDL---MMED----------EFGPVDRLPTRIFLNGPNIGEEFSCEFKTGDTAY 144
+ PE L M D FGP+D L TR+FL GP I EEF E + G T +
Sbjct: 1000 EEVTPEDVLSAAMYPDVFAQFKDFTATFGPLDSLNTRLFLQGPKIAEEFEVELERGKTLH 1059
Query: 145 VTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRSKADSDTAGEIGAPMPG 204
+ L++S+ LN G+R VFF NGQLRS+L++D K++ KA D G+IGAPMPG
Sbjct: 1060 IKALAVSD-LNRAGQRQVFFELNGQLRSILVKDTQAMKEMHFHPKALKDVKGQIGAPMPG 1118
Query: 205 NIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG----VHKVRSSNLD 251
+I+VK G +V K L V+S MK ET++ + +G VH + L+
Sbjct: 1119 KVIDVKVAAGAKVVKGQPLCVLSAMKMETVVTSPMEGTIRKVHVTKDMTLE 1169
>sp|O17732|PYC1_CAEEL Pyruvate carboxylase 1 OS=Caenorhabditis elegans GN=pyc-1 PE=1 SV=1
Length = 1175
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 132/258 (51%), Gaps = 44/258 (17%)
Query: 27 IRSTRGWVWIGYIEECLRQLLIKAKDVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQ 86
I+ T +G + + + Q + + +++ AD + FPKSV F QG++G+P GFP+ L+
Sbjct: 901 IKVTPSSKIVGDLAQFMVQNNLTRETLVDRADDLSFPKSVVDFMQGNVGQPPYGFPEPLR 960
Query: 87 EKVL-GSLKDHTLDRKP-------------------------ECDLM------------- 107
KVL G K +D +P E D+M
Sbjct: 961 TKVLRGKPK---VDGRPGENAKPVDLDAVKVELEEKHGRTLSEEDVMSYSMFPTVFDEFE 1017
Query: 108 -MEDEFGPVDRLPTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFFLY 166
++GPVD+LPTR+FL G I EE E ++G T + L+ +LN GER VFF
Sbjct: 1018 TFRQQYGPVDKLPTRLFLTGLEIAEEVDVEIESGKTLAIQLLA-EGKLNKRGEREVFFDL 1076
Query: 167 NGQLRSVLIRDKNQAKKLKLRSKADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVM 226
NGQ+RS+ + DK +K++ R +A G IGAPMPG+++E+K K G +V K L V+
Sbjct: 1077 NGQMRSIFVVDKEASKEIVTRPRALPGVRGHIGAPMPGDVLELKIKEGDKVTKKQPLFVL 1136
Query: 227 SVMKTETLIHASADGVHK 244
S MK E +I + G K
Sbjct: 1137 SAMKMEMVIDSPIAGTVK 1154
>sp|Q8X1T3|PYC_PICAN Pyruvate carboxylase OS=Pichia angusta GN=PYC PE=3 SV=1
Length = 1175
Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 114/233 (48%), Gaps = 40/233 (17%)
Query: 48 IKAKDVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDHTLDRKP----- 102
+ KDV A ++ FP SV FF+G +G PY GFP+ L+ +L K L R+P
Sbjct: 920 LSPKDVERLASELDFPDSVLDFFEGLMGTPYGGFPEPLRTNILAG-KRRKLTRRPGLELE 978
Query: 103 --------------------ECDLM--------------MEDEFGPVDRLPTRIFLNGPN 128
ECD+ +++++G + LPTR FL P
Sbjct: 979 PFDLKKIKEELQSRFGNSITECDVASYNMYPKVFESFKKIQEKYGDLSVLPTRFFLAPPK 1038
Query: 129 IGEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRS 188
+ EE S E + G T + ++I + G R V+F +NG++R V + DK A + R
Sbjct: 1039 LNEEISVEIEQGKTFVIKVMAIGDLSPQTGTREVYFEFNGEMRKVTVEDKLAAVETVTRP 1098
Query: 189 KADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
KAD+ E+GAPM G +IEV+ G +VKK D L V+S MK E +I + G
Sbjct: 1099 KADAHNPNEVGAPMAGVVIEVRVHPGVEVKKGDPLCVLSAMKMEMVISSPVSG 1151
>sp|Q9UUE1|PYC_SCHPO Pyruvate carboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pyr1 PE=3 SV=1
Length = 1185
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 115/246 (46%), Gaps = 37/246 (15%)
Query: 36 IGYIEECLRQLLIKAKDVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKD 95
+G + + + Q + A+DV A + FP SV FFQG +G+PY GFP+ L+ VL +
Sbjct: 918 VGDLAQFMVQNKLSAEDVENRATTLDFPASVLDFFQGLMGQPYGGFPEPLRTNVLKGRRQ 977
Query: 96 HTLDR-----------------------KPECDL--------------MMEDEFGPVDRL 118
DR +CD+ D +G + +
Sbjct: 978 PLTDRPGKFLPAADFDAIRKLLSEKFGVSSDCDIAAYTQFPGVFEEYRQFVDRYGDLTTV 1037
Query: 119 PTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDK 178
PT+ FL+ P + EE E G T V +++ G+R V+F NG+ R V + DK
Sbjct: 1038 PTKFFLSRPEMNEEMHVEIDQGKTLIVKFVALGPLNPRTGQREVYFELNGENRHVTVEDK 1097
Query: 179 NQAKKLKLRSKADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHAS 238
A + R +AD G + APM G I+E++ K G +VKK D++ V+S MK E +I A
Sbjct: 1098 KAAIETVTRPRADPGNPGHVAAPMSGTIVEIRVKEGAKVKKGDIIAVLSAMKMEIVISAP 1157
Query: 239 ADGVHK 244
GV K
Sbjct: 1158 HSGVLK 1163
>sp|Q0CLK1|PYC_ASPTN Pyruvate carboxylase OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=pyc PE=3 SV=2
Length = 1193
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 40/232 (17%)
Query: 48 IKAKDVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDHTLDRKP----- 102
+ A+DV++ A ++ FP SV F +G +G+P+ GFP+ L+ + L + + LD++P
Sbjct: 939 LSAQDVIDRAAELDFPGSVLEFLEGLMGQPFGGFPEPLRSRALRNRR--KLDKRPGLYLE 996
Query: 103 -------------------ECDL--------MMED------EFGPVDRLPTRIFLNGPNI 129
E D+ + ED ++G + LPTR FL P I
Sbjct: 997 PLDLAAIKNQIREQFGSATEYDVASYAMYPKVFEDYKKFVQKYGDLSVLPTRYFLAKPEI 1056
Query: 130 GEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRSK 189
GEEF E + G + L+I G+R VF+ NG++R V I DK + R K
Sbjct: 1057 GEEFHVELEKGKMLILKLLAIGPLSEQTGQREVFYEVNGEVRQVSIDDKKASIDNTARPK 1116
Query: 190 ADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
AD + ++GAPM G ++E++ G +VKK D L V+S MK E +I A G
Sbjct: 1117 ADVGDSSQVGAPMSGVVVEIRVHDGLEVKKGDPLAVLSAMKMEMVISAPHSG 1168
>sp|O93918|PYC_ASPTE Pyruvate carboxylase OS=Aspergillus terreus GN=pyc PE=2 SV=1
Length = 1193
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 116/232 (50%), Gaps = 40/232 (17%)
Query: 48 IKAKDVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDHTLDRKP----- 102
+ A+DV++ A ++ FP SV F +G +G+P+ GFP+ L+ + L + + LD++P
Sbjct: 939 LSAQDVVDRAAELDFPGSVLEFLEGLMGQPFGGFPEPLRSRALRNRR--KLDKRPGLYLE 996
Query: 103 -------------------ECDL--------MMED------EFGPVDRLPTRIFLNGPNI 129
E D+ + ED ++G + LPTR FL P I
Sbjct: 997 PLDLAAIKNQIREQFGSATEYDVASYAMYPKVFEDYKKFVQKYGDLSVLPTRYFLAKPEI 1056
Query: 130 GEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRSK 189
GEEF E + G + L+I G+R VF+ NG++R V I DK + R K
Sbjct: 1057 GEEFHVELEKGKVLILKLLAIGPLSEQTGQREVFYEVNGEVRQVSIDDKKASIDNTARPK 1116
Query: 190 ADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
AD + ++GAPM G ++E++ G +VKK D L V+S MK E +I A G
Sbjct: 1117 ADVGDSSQVGAPMSGVVVEIRVHDGLEVKKGDPLAVLSAMKMEMVISAPHSG 1168
>sp|Q9HES8|PYC_ASPNG Pyruvate carboxylase OS=Aspergillus niger GN=pyc PE=3 SV=1
Length = 1192
Score = 117 bits (293), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 115/232 (49%), Gaps = 40/232 (17%)
Query: 48 IKAKDVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDHTLDRKP----- 102
+ A+DV+ A ++ FP SV F +G +G+PY GFP+ L+ + L + LD++P
Sbjct: 938 LTAEDVIARAGELDFPGSVLEFLEGLMGQPYGGFPEPLRSRALRDRR--KLDKRPGLYLE 995
Query: 103 -------------------ECDL--------MMED------EFGPVDRLPTRIFLNGPNI 129
E D+ + ED +FG + LPTR FL P I
Sbjct: 996 PLDLAKIKSQIRENYGAATEYDVASYAMYPKVFEDYKKFVAKFGDLSVLPTRYFLAKPEI 1055
Query: 130 GEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRSK 189
GEEF E + G + L+I G+R VF+ NG++R V + DK + + R K
Sbjct: 1056 GEEFHVELEKGKVLILKLLAIGPLSEQTGQREVFYEVNGEVRQVSVDDKKASVENTARPK 1115
Query: 190 ADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
A+ + ++GAPM G ++E++ G +VKK D + V+S MK E +I A G
Sbjct: 1116 AELGDSSQVGAPMSGVVVEIRVHDGLEVKKGDPIAVLSAMKMEMVISAPHSG 1167
>sp|Q9KWU4|PYC_BACSU Pyruvate carboxylase OS=Bacillus subtilis (strain 168) GN=pyc PE=3
SV=1
Length = 1148
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 109/231 (47%), Gaps = 38/231 (16%)
Query: 51 KDVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDHTL------------ 98
KDV E + + FP SV F+G+IG+P+ GFP+KLQ+ +L + T+
Sbjct: 897 KDVYEKGESLDFPDSVVELFKGNIGQPHGGFPEKLQKLILKGQEPITVRPGELLEPVSFE 956
Query: 99 ----DRKPECDLMMEDE---------------------FGPVDRLPTRIFLNGPNIGEEF 133
+ K + +L + D+ +G + L T F G +GEE
Sbjct: 957 AIKQEFKEQHNLEISDQDAVAYALYPKVFTDYVKTTESYGDISVLDTPTFFYGMTLGEEI 1016
Query: 134 SCEFKTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKLRSKADSD 193
E + G T V +SI E D R V+F NGQ R V+I+D++ ++ R KAD
Sbjct: 1017 EVEIERGKTLIVKLISIGEPQPD-ATRVVYFELNGQPREVVIKDESIKSSVQERLKADRT 1075
Query: 194 TAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGVHK 244
I A MPG +I+V A+ G +V K D L++ MK ET + A G K
Sbjct: 1076 NPSHIAASMPGTVIKVLAEAGTKVNKGDHLMINEAMKMETTVQAPFSGTIK 1126
>sp|P11154|PYC1_YEAST Pyruvate carboxylase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PYC1 PE=1 SV=2
Length = 1178
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 43 LRQLLIKAK----DVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDHTL 98
L Q ++ K DV A+ + FP SV FF+G IG+PY GFP+ + VL + K L
Sbjct: 907 LAQFMVSNKLTSDDVRRLANSLDFPDSVMDFFEGLIGQPYGGFPEPFRSDVLRN-KRRKL 965
Query: 99 DRKP------------------------ECDLM--------------MEDEFGPVDRLPT 120
+P ECD+ M + +G + LPT
Sbjct: 966 TCRPGLELEPFDLEKIREDLQNRFGDVDECDVASYNMYPRVYEDFQKMRETYGDLSVLPT 1025
Query: 121 RIFLNGPNIGEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQ 180
R FL+ EE + G T + ++ + GER V+F NG++R + + D++Q
Sbjct: 1026 RSFLSPLETDEEIEVVIEQGKTLIIKLQAVGDLNKKTGEREVYFDLNGEMRKIRVADRSQ 1085
Query: 181 AKKLKLRSKADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASAD 240
+ +SKAD IGAPM G I+EVK G +KK + V+S MK E +I + +D
Sbjct: 1086 KVETVTKSKADMHDPLHIGAPMAGVIVEVKVHKGSLIKKGQPVAVLSAMKMEMIISSPSD 1145
Query: 241 G 241
G
Sbjct: 1146 G 1146
>sp|P32327|PYC2_YEAST Pyruvate carboxylase 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PYC2 PE=1 SV=2
Length = 1180
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 112/241 (46%), Gaps = 43/241 (17%)
Query: 43 LRQLLIKAK----DVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDHTL 98
L Q ++ K D+ A+ + FP SV FF+G IG+PY GFP+ L+ VL + K L
Sbjct: 908 LAQFMVSNKLTSDDIRRLANSLDFPDSVMDFFEGLIGQPYGGFPEPLRSDVLRN-KRRKL 966
Query: 99 DRKP------------------------ECDLM--------------MEDEFGPVDRLPT 120
+P ECD+ + + +G + LPT
Sbjct: 967 TCRPGLELEPFDLEKIREDLQNRFGDIDECDVASYNMYPRVYEDFQKIRETYGDLSVLPT 1026
Query: 121 RIFLNGPNIGEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQ 180
+ FL EE + G T + ++ + G+R V+F NG+LR + + DK+Q
Sbjct: 1027 KNFLAPAEPDEEIEVTIEQGKTLIIKLQAVGDLNKKTGQREVYFELNGELRKIRVADKSQ 1086
Query: 181 AKKLKLRSKADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASAD 240
+ + KAD +IGAPM G IIEVK G VKK + + V+S MK E ++ + AD
Sbjct: 1087 NIQSVAKPKADVHDTHQIGAPMAGVIIEVKVHKGSLVKKGESIAVLSAMKMEMVVSSPAD 1146
Query: 241 G 241
G
Sbjct: 1147 G 1147
>sp|P78992|PYC_PICPA Pyruvate carboxylase OS=Komagataella pastoris GN=PYC1 PE=3 SV=1
Length = 1189
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 107/235 (45%), Gaps = 42/235 (17%)
Query: 48 IKAKDVMENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDHTLDRKPECDL- 106
+ ++DV A ++ FP SV FF+G +G PY GFP+ L+ V+ S K L +P L
Sbjct: 918 LSSEDVERLASELDFPDSVLDFFEGLMGTPYGGFPEPLRTNVI-SGKRRKLTSRPGLTLE 976
Query: 107 -------------------------------------MMEDEFGPVDRLPTRIFLNGPNI 129
++ +G + LPTR FL+ P I
Sbjct: 977 PYNIPAIREDLEARFSKVTENDVASYNMYPKVYEAYKKQQELYGDLSVLPTRNFLSPPKI 1036
Query: 130 GEEFSCEF---KTGDTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLKL 186
EE +T T + ++ E G R V+F NG++R V + DKN A +
Sbjct: 1037 DEERHVTIVTIETRKTLIIKCMAEGELSQSSGTREVYFELNGEMRKVTVEDKNGAVETIT 1096
Query: 187 RSKADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
R KAD+ EIGAPM G ++EV+ +VKK D + V+S MK E +I + G
Sbjct: 1097 RPKADAHNPNEIGAPMAGVVVEVRVHENGEVKKGDPIAVLSAMKMEMVISSPVAG 1151
>sp|Q19842|PCCA_CAEEL Propionyl-CoA carboxylase alpha chain, mitochondrial
OS=Caenorhabditis elegans GN=pcca-1 PE=1 SV=1
Length = 724
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 141 DTAYVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLK-LRSKADSDTAGEIG 199
D ++TT + +R GE TV LY G V + + K L+ ++ KA D + +
Sbjct: 605 DGEHITTQIVGKRA---GEITV--LYKGTPFKVKVLPEQAVKYLQYMKEKAKVDLSTVVL 659
Query: 200 APMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGVHKVRSSNL 250
+PMPG I V K G V + L+VM MK + +HA G +V++ N+
Sbjct: 660 SPMPGAIKNVNVKPGDMVSEGQELVVMEAMKMQNSLHAGKTG--RVKAVNV 708
>sp|Q612F5|PCCA_CAEBR Propionyl-CoA carboxylase alpha chain, mitochondrial
OS=Caenorhabditis briggsae GN=pcca-1 PE=3 SV=1
Length = 738
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 144 YVTTLSISERLNDHGERTVFFLYNGQLRSVLIRDKNQAKKLK-LRSKADSDTAGEIGAPM 202
++TT + +R GE TV LY G V + + K L+ ++ KA D + + +PM
Sbjct: 622 HITTQIVGKRA---GEITV--LYKGTPFKVQVLPEQAVKYLQYMKEKAKVDLSTVVLSPM 676
Query: 203 PGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGVHKVRSSNL 250
PG I V K G V + L+VM MK + +HA G +V++ N+
Sbjct: 677 PGAIKNVNVKPGDMVSEGQELVVMEAMKMQNSLHAGKTG--RVKAVNV 722
>sp|Q54KE6|MCCA_DICDI Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=mccA PE=3 SV=1
Length = 699
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 19/118 (16%)
Query: 150 ISERLNDHGERTVFFLYNGQ----LRSVLIRDK----NQAKKLKL------RSKADSDTA 195
+ +LN + E T+ NG+ ++SV+++D N+ ++ +L + K
Sbjct: 572 LDAKLNQNNE-TISAHVNGRFYNNIKSVIVKDTLTIFNEGQQYQLDIPQDVKPKGADGVL 630
Query: 196 GEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGVHKVRSSNLDYN 253
G + +PMPG I +V VG VKK +++M MK E I + DG KV S L YN
Sbjct: 631 GSLVSPMPGKITKVMVNVGDMVKKGQPILLMEAMKMEHTIRSPIDG--KVES--LPYN 684
>sp|Q9ZAA7|GCDC_ACIFV Glutaconyl-CoA decarboxylase subunit gamma OS=Acidaminococcus
fermentans (strain ATCC 25085 / DSM 20731 / VR4) GN=gcdC
PE=1 SV=1
Length = 145
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 198 IGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG-VHKVR 246
+ APMPG I+ V K G +V+ DVL+++ MK + I A DG V +VR
Sbjct: 80 VSAPMPGKILSVNVKPGDKVEAGDVLLILEAMKMQNEIMAPEDGTVSEVR 129
>sp|Q8XGX8|DCOA_SALTI Oxaloacetate decarboxylase alpha chain OS=Salmonella typhi GN=oadA1
PE=3 SV=3
Length = 591
Score = 41.2 bits (95), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 198 IGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
+ AP+ GNI +V A GQ V + DVL+++ MK ET I A+ G
Sbjct: 525 VTAPLAGNIWKVIATEGQSVAEGDVLLILEAMKMETEIRAAQAG 568
>sp|Q03030|DCOA_SALTY Oxaloacetate decarboxylase alpha chain OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=oadA1 PE=3 SV=2
Length = 591
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 198 IGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
+ AP+ GNI +V A GQ V + DVL+++ MK ET I A+ G
Sbjct: 525 VTAPLAGNIWKVIATEGQTVAEGDVLLILEAMKMETEIRAAQAG 568
>sp|D3DJ41|2OCL_HYDTT 2-oxoglutarate carboxylase large subunit OS=Hydrogenobacter
thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
GN=cfiA PE=1 SV=1
Length = 652
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 196 GEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGV 242
G+ APMPG ++ V K G +VK+ + ++ MK E IHA GV
Sbjct: 575 GDATAPMPGRVVRVLVKEGDKVKEGQTVAIVEAMKMENEIHAPISGV 621
>sp|P0A508|BCCA_MYCTU Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium tuberculosis GN=accA1 PE=1 SV=1
Length = 654
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 196 GEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
E+ +PMPG++I V+ + G Q+ DV++V+ MK E + A G
Sbjct: 586 AEVVSPMPGSVIAVQVESGSQISAGDVVVVVEAMKMEHSLEAPVSG 631
>sp|P0A509|BCCA_MYCBO Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=accA1 PE=3 SV=1
Length = 654
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 196 GEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
E+ +PMPG++I V+ + G Q+ DV++V+ MK E + A G
Sbjct: 586 AEVVSPMPGSVIAVQVESGSQISAGDVVVVVEAMKMEHSLEAPVSG 631
>sp|Q5I0C3|MCCA_RAT Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Rattus norvegicus GN=Mccc1 PE=1 SV=1
Length = 715
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 26/48 (54%)
Query: 194 TAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
T G APM G I +V K G +VK D L+VM MK E I A DG
Sbjct: 641 TQGGTIAPMTGTIEKVFVKAGDRVKAGDALMVMIAMKMEHTIKAPKDG 688
>sp|Q96RQ3|MCCA_HUMAN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
OS=Homo sapiens GN=MCCC1 PE=1 SV=3
Length = 725
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%)
Query: 186 LRSKADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGVHK 244
L S + +T G APM G I +V K G +VK D L+VM MK E I + DG K
Sbjct: 637 LSSVSSQETQGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVK 695
>sp|Q99MR8|MCCA_MOUSE Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Mus
musculus GN=Mccc1 PE=2 SV=2
Length = 717
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 190 ADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
A+ G I APM G I +V K G +VK D L+VM MK E I A DG
Sbjct: 638 AEGAQGGTI-APMTGTIEKVFVKAGDRVKAGDSLMVMIAMKMEHTIKAPKDG 688
>sp|Q58628|PYCB_METJA Pyruvate carboxylase subunit B OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pycB PE=1 SV=1
Length = 567
Score = 38.9 bits (89), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 185 KLRSKADSDTA---GEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
+L+ K + TA G + +P G + ++K K G +VKK DV++V+ MK E I + +G
Sbjct: 485 ELKRKKEVITAEMEGAVTSPFRGMVTKIKVKEGDKVKKGDVIVVLEAMKMEHPIESPVEG 544
>sp|P46392|BCCA_MYCLE Acetyl-/propionyl-coenzyme A carboxylase alpha chain
OS=Mycobacterium leprae (strain TN) GN=bccA PE=3 SV=2
Length = 598
Score = 38.9 bits (89), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 174 LIRDKNQAKKLKLRSKADSDTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTET 233
+IR K + +K + A + + + APM G +++V GQ V D+++V+ MK E
Sbjct: 509 VIRKKPKPRKRGGHTGA-ATSGDAVTAPMQGTVVKVAVAEGQTVMTGDLVVVLEAMKMEN 567
Query: 234 LIHASADGV 242
+ A DG+
Sbjct: 568 PVTAHKDGI 576
>sp|A4X692|DER_SALTO GTPase Der OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818
/ CNB-440) GN=der PE=3 SV=1
Length = 467
Score = 38.1 bits (87), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 40 EECLRQLLIKAKDVM---ENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDH 96
E ++ L AK V+ AD SA + +GEPY L + G L D
Sbjct: 122 EAAVKMLRRSAKPVILVANKADNSSIEMEASALWSLGLGEPYP--VSALHGRGSGELLDL 179
Query: 97 TLDRKPECDLMMEDEFGPVDRLPTRIFLNG-PNIGE-----EFSCEFKT 139
LDR PE ++ED R P R+ L G PN+G+ FS E +
Sbjct: 180 ILDRLPEAPKIVEDR----PRGPRRVALVGRPNVGKSSLLNRFSGEIRA 224
>sp|P29337|BCCP_STRMU Biotin carboxyl carrier protein OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=bcc PE=3 SV=2
Length = 130
Score = 35.8 bits (81), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 200 APMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG 241
APMPG I++V VG V +N L+++ MK E I A G
Sbjct: 66 APMPGTILKVLVNVGDTVSENQPLMILEAMKMENEIVAGMAG 107
>sp|A8LYU3|DER_SALAI GTPase Der OS=Salinispora arenicola (strain CNS-205) GN=der PE=3
SV=1
Length = 467
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 15/109 (13%)
Query: 40 EECLRQLLIKAKDVM---ENADKIIFPKSVSAFFQGSIGEPYQGFPKKLQEKVLGSLKDH 96
E ++ L AK V+ AD + + +GEPY L + G L D
Sbjct: 122 ESAVKMLRRSAKPVILVANKADNSSIEMEAATLWSLGLGEPYP--VSALHGRGSGELLDV 179
Query: 97 TLDRKPECDLMMEDEFGPVDRLPTRIFLNG-PNIGE-----EFSCEFKT 139
+DR PE ++ED R P R+ L G PN+G+ FS E +
Sbjct: 180 IMDRLPEAPKIIEDR----PRGPRRVALVGRPNVGKSSLLNRFSGEVRA 224
>sp|P05165|PCCA_HUMAN Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Homo
sapiens GN=PCCA PE=1 SV=4
Length = 728
Score = 34.7 bits (78), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 158 GERTVFFLYNGQLRSVLIRDKNQAKKLKLRSKADSDTAGEIGAPMPGNIIEVKAKVGQQV 217
G ++ FL ++L R + K L K DT+ + +PMPG ++ V K G V
Sbjct: 623 GNMSIQFLGTVYKVNILTRLAAELNKFMLE-KVTEDTSSVLRSPMPGVVVAVSVKPGDAV 681
Query: 218 KKNDVLIVMSVMKTETLIHASADGVHK 244
+ + V+ MK + + A G K
Sbjct: 682 AEGQEICVIEAMKMQNSMTAGKTGTVK 708
>sp|O27179|PYCB_METTH Pyruvate carboxylase subunit B OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pycB PE=1 SV=1
Length = 568
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 193 DTAGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGV 242
D G + + M G ++++K G QV DV+ V+ MK E I GV
Sbjct: 497 DVEGAVKSTMQGMVVKLKVSEGDQVNAGDVVAVVEAMKMENDIQTPHGGV 546
>sp|P02904|BCCP_PROFR Methylmalonyl-CoA carboxyltransferase 1.3S subunit
OS=Propionibacterium freudenreichii subsp. shermanii
PE=1 SV=1
Length = 123
Score = 33.1 bits (74), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 198 IGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG-VHKV 245
I AP+ G + ++ K G VK ++V+ MK ET I+A DG V KV
Sbjct: 57 IPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKV 105
>sp|Q91ZA3|PCCA_MOUSE Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Mus
musculus GN=Pcca PE=2 SV=2
Length = 724
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 158 GERTVFFLYNGQLRSVLIRDKNQAKKLK-LRSKADSDTAGEIGAPMPGNIIEVKAKVGQQ 216
G ++ FL G + V I K A+ K + K DT+ + +PMPG ++ V K G
Sbjct: 619 GNMSIQFL--GTVYKVHILTKLAAELNKFMLEKVPKDTSSTLCSPMPGVVVAVSVKPGDM 676
Query: 217 VKKNDVLIVMSVMKTETLIHASADG 241
V + + V+ MK + + A G
Sbjct: 677 VAEGQEICVIEAMKMQNSMTAGKMG 701
>sp|Q9CCH9|BTB7_MYCLE Biotinylated protein TB7.3 homolog OS=Mycobacterium leprae (strain
TN) GN=ML0802 PE=3 SV=2
Length = 71
Score = 32.0 bits (71), Expect = 5.5, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 195 AGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGV 242
A ++ A + +++EV G Q+ K DVL+++ MK E + A G+
Sbjct: 2 AEDVRAEIVASVLEVVVSEGDQIGKGDVLVLLESMKMEIPVLAGVAGI 49
>sp|Q6D8C5|TILS_ERWCT tRNA(Ile)-lysidine synthase OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=tilS
PE=3 SV=1
Length = 440
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 11/93 (11%)
Query: 89 VLGSLKDHTLDRKP-ECDLMMEDEFGPVDRLPTRIFLNGPNIGEEFSCEFKTGDTAYVTT 147
++ SLKD L +P C L + D G + + + + P GE S F T T ++
Sbjct: 320 LMPSLKDRVLPWQPTSCPLSLPDNLGTLLLADSGVAVRAPKNGETVSIRFSTSGTVHIVG 379
Query: 148 LS----ISERLNDHG------ERTVFFLYNGQL 170
+ I + + G +RT YN QL
Sbjct: 380 RAHGRQIKKLWQELGVPPWWRDRTPLLFYNEQL 412
>sp|P78820|ACAC_SCHPO Acetyl-CoA carboxylase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cut6 PE=1 SV=2
Length = 2280
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 24/145 (16%)
Query: 117 RLPTRIFLNGPNIGEEFSCEFKTGDTAYVTTLSISERLNDH----GERT----------- 161
++P+R FL N+ + EF +T Y T S S + H G R
Sbjct: 618 QVPSREFLK--NV---YDIEFIYDNTRYRFTASRSSPGSYHLFLNGSRCTAGVRSLTDGG 672
Query: 162 VFFLYNGQLRSVLIRDKNQAKKLKLRSKA----DSDTAGEIGAPMPGNIIEVKAKVGQQV 217
+ L NG +V RD+ ++ + + + + ++ P PG ++ + G+ +
Sbjct: 673 LLVLLNGHSYTVYYRDEVTGTRISIDNLSCMLEQENDPTQLRTPSPGKLVRFLVETGEHI 732
Query: 218 KKNDVLIVMSVMKTETLIHASADGV 242
K + + VMK + A+ DGV
Sbjct: 733 KAGEAYAEVEVMKMIMPLVATEDGV 757
>sp|P0A510|BTB7_MYCTU Biotinylated protein TB7.3 OS=Mycobacterium tuberculosis GN=Rv3221c
PE=1 SV=2
Length = 71
Score = 31.6 bits (70), Expect = 6.3, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 195 AGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG-VHKVRSS 248
A ++ A + +++EV G Q+ K DV++++ MK E + A A G V KV S
Sbjct: 2 AEDVRAEIVASVLEVVVNEGDQIDKGDVVVLLESMKMEIPVLAEAAGTVSKVAVS 56
>sp|P0A511|BTB7_MYCBO Biotinylated protein TB7.3 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb3247c PE=3 SV=2
Length = 71
Score = 31.6 bits (70), Expect = 6.3, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 195 AGEIGAPMPGNIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADG-VHKVRSS 248
A ++ A + +++EV G Q+ K DV++++ MK E + A A G V KV S
Sbjct: 2 AEDVRAEIVASVLEVVVNEGDQIDKGDVVVLLESMKMEIPVLAEAAGTVSKVAVS 56
>sp|A9KLX9|MNME_CLOPH tRNA modification GTPase MnmE OS=Clostridium phytofermentans
(strain ATCC 700394 / DSM 18823 / ISDg) GN=mnmE PE=3
SV=1
Length = 458
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 67 SAFFQGSIGEP----YQGFPKKLQEKVLGSLKDHTLDRKPECDLMMEDEFGPVDRLPTR- 121
+A+ + ++ +P +GF KL++ V+GS+K+ + +L+ E G + + R
Sbjct: 172 TAYIEAALDDPEHISLEGFSDKLRDNVIGSIKELS-------ELINTSENGRMIKEGIRT 224
Query: 122 IFLNGPNIGEEFSCEFKTGDTAYVTTLSISERLNDHGERTVFF 164
+ L PN G+ G+ + T I+ D E TVF
Sbjct: 225 VILGRPNAGKSSLLNLMVGEERAIVT-EIAGTTRDTIEETVFL 266
>sp|P79076|P2OX_TRAVE Pyranose 2-oxidase OS=Trametes versicolor GN=P2OX PE=1 SV=1
Length = 623
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 14/109 (12%)
Query: 159 ERTVFFLYNGQLRSVLIRDKNQAKKLKLRSKADSDTAG--------------EIGAPMPG 204
ER V N ++ S+ I D + ++++ TAG ++G P P
Sbjct: 284 ERVVRNTSNSEIESLHIHDLISGDRFEIKADVFVLTAGAVHNAQLLVNSGFGQLGRPDPA 343
Query: 205 NIIEVKAKVGQQVKKNDVLIVMSVMKTETLIHASADGVHKVRSSNLDYN 253
N ++ +G + + ++ +VM TE + +D + + +L Y+
Sbjct: 344 NPPQLLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMIIRGNPGDLGYS 392
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,360,521
Number of Sequences: 539616
Number of extensions: 4463433
Number of successful extensions: 10136
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 10068
Number of HSP's gapped (non-prelim): 76
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)