BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy281
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VTC4|U195A_DROME MIP18 family protein CG7949 OS=Drosophila melanogaster GN=CG7949
PE=1 SV=1
Length = 156
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/149 (67%), Positives = 126/149 (84%)
Query: 8 LENINPTLYSKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDLS 67
+ENINP +Y + ++R +TA ++++ + D FD REIFDLIRNI DPEHPLTLEELHVV
Sbjct: 5 IENINPNVYDRIKERVLTANEEDENVPDPFDKREIFDLIRNINDPEHPLTLEELHVVQED 64
Query: 68 LIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFA 127
LI++N+ N + ++FTPTIPHCSMATLIGLSIRV+L+R+LP RFKV VEITPG+H++E A
Sbjct: 65 LIRINDSQNSVHISFTPTIPHCSMATLIGLSIRVKLLRSLPPRFKVTVEITPGTHASELA 124
Query: 128 INKQLADKERVAAALENSTLIGVINQCIS 156
+NKQLADKERVAAALEN+ L VINQCI+
Sbjct: 125 VNKQLADKERVAAALENNHLAEVINQCIA 153
>sp|Q9Y3D0|MIP18_HUMAN Mitotic spindle-associated MMXD complex subunit MIP18 OS=Homo
sapiens GN=FAM96B PE=1 SV=1
Length = 163
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/150 (62%), Positives = 125/150 (83%)
Query: 7 VLENINPTLYSKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDL 66
+LEN NP +Y + +RPVTA ++++ + D D+REIFDLIR+I DPEHPLTLEEL+VV+
Sbjct: 11 LLENANPLIYQRSGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQ 70
Query: 67 SLIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEF 126
+QV++ + + V FTPTIPHCSMATLIGLSI+V+L+R+LP RFK+ V ITPG+H++E
Sbjct: 71 VRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEH 130
Query: 127 AINKQLADKERVAAALENSTLIGVINQCIS 156
A+NKQLADKERVAAALEN+ L+ V+NQC+S
Sbjct: 131 AVNKQLADKERVAAALENTHLLEVVNQCLS 160
>sp|Q9D187|MIP18_MOUSE Mitotic spindle-associated MMXD complex subunit MIP18 OS=Mus
musculus GN=Fam96b PE=2 SV=1
Length = 163
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/150 (63%), Positives = 125/150 (83%)
Query: 7 VLENINPTLYSKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDL 66
+LEN NP +Y + +RPVTA ++++ + D D+REIFDLIR+I DPEHPLTLEEL+VV+
Sbjct: 11 LLENANPLIYERSGERPVTAGEEDEEVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQ 70
Query: 67 SLIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEF 126
IQV++ + + V FTPTIPHCSMATLIGLSI+V+L+R+LP RFK+ V ITPG+H++E
Sbjct: 71 VRIQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEH 130
Query: 127 AINKQLADKERVAAALENSTLIGVINQCIS 156
A+NKQLADKERVAAALEN+ L+ V+NQC+S
Sbjct: 131 AVNKQLADKERVAAALENTHLLEVVNQCLS 160
>sp|O62252|U195_CAEEL MIP18 family protein F45G2.10 OS=Caenorhabditis elegans GN=F45G2.10
PE=1 SV=1
Length = 160
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 121/158 (76%), Gaps = 3/158 (1%)
Query: 4 GGDVLENINPTLY-SKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHPLTLEELH 62
G + L+N NPTL+ SK RPVT ++++ + D DS EIFDLIR+I DPEHP TLE+L+
Sbjct: 2 GQERLDNANPTLFDSKPRHRPVTGTERDESVEDPIDSWEIFDLIRDINDPEHPYTLEQLN 61
Query: 63 VVDLSLIQV--NNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPG 120
VV LI+V + E +KVNFTPTIPHCSMATLIGL+IRV+L+R+L + KV V ITPG
Sbjct: 62 VVQEELIKVFIDEEETFVKVNFTPTIPHCSMATLIGLAIRVKLLRSLHPKVKVSVSITPG 121
Query: 121 SHSTEFAINKQLADKERVAAALENSTLIGVINQCISRP 158
SHSTE +IN+QLADKERVAAA+EN L+ +N+C+ P
Sbjct: 122 SHSTEESINRQLADKERVAAAMENQGLMHAVNECLRVP 159
>sp|Q54QK1|FA96B_DICDI MIP18 family protein FAM96B OS=Dictyostelium discoideum GN=fam96B
PE=3 SV=2
Length = 163
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 116/160 (72%), Gaps = 11/160 (6%)
Query: 9 ENINPTLYSKCEDRPVTAEDQNDYIT----------DEFDSREIFDLIRNIYDPEHPLTL 58
+N NP +Y E+ +++N + + DEFD +EIFDL+R+I DPEHPLTL
Sbjct: 3 DNPNPVIYVDNENCKSFEDNENSFNSSRYSIEEDQIDEFDEQEIFDLVRSITDPEHPLTL 62
Query: 59 EELHVVDLSLIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEIT 118
E+L+VV + + +N E + I + FTPT+PHCSMA LIGLSI+ +L R+LP RFKV V +T
Sbjct: 63 EQLNVVRIENVNINLENSYILLYFTPTVPHCSMANLIGLSIKEKLARSLPKRFKVDVIVT 122
Query: 119 PGSHSTEFAINKQLADKERVAAALE-NSTLIGVINQCISR 157
PGSHS+E ++NKQL DKERV+AAL+ +S+++ ++N+CI +
Sbjct: 123 PGSHSSESSVNKQLNDKERVSAALDTSSSILTIVNECIKQ 162
>sp|Q9C9G6|U195A_ARATH MIP18 family protein At1g68310 OS=Arabidopsis thaliana GN=At1g68310
PE=2 SV=2
Length = 157
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 108/147 (73%), Gaps = 1/147 (0%)
Query: 10 NINPTLYSKCEDRPVTAEDQNDYITDE-FDSREIFDLIRNIYDPEHPLTLEELHVVDLSL 68
N NP +Y K E R T D +T E D EIFD IR+I DPEHP TLE+L VV
Sbjct: 7 NENPIIYPKKERRLRTDTSITDELTPEPIDQLEIFDHIRDIKDPEHPNTLEDLRVVTEDS 66
Query: 69 IQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFAI 128
++V++E + ++V FTPT+ HCSMAT+IGL +RV+L+R+LP+R+K+ + + PGSH+TE A+
Sbjct: 67 VEVDDENSYVRVTFTPTVEHCSMATVIGLCVRVKLLRSLPSRYKIDIRVAPGSHATEDAL 126
Query: 129 NKQLADKERVAAALENSTLIGVINQCI 155
NKQL DKERVAAALEN L+ ++++C+
Sbjct: 127 NKQLNDKERVAAALENPNLVEMVDECL 153
>sp|P38829|YHS2_YEAST MIP18 family protein YHR122W OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YHR122W PE=1 SV=1
Length = 231
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 100/147 (68%), Gaps = 5/147 (3%)
Query: 14 TLYSKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQVNN 73
+L ++ ED V + + D D++EI+DLI +I DPEHPL+L +L VV+L I V++
Sbjct: 81 SLPAESEDESVAGGGKEEEEPDLIDAQEIYDLIAHISDPEHPLSLGQLSVVNLEDIDVHD 140
Query: 74 ETNQ-----IKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFAI 128
NQ + + TPTI HCS+ATLIGL IRVRL R+LP RF++ + + G+H +E +
Sbjct: 141 SGNQNEMAEVVIKITPTITHCSLATLIGLGIRVRLERSLPPRFRITILLKKGTHDSENQV 200
Query: 129 NKQLADKERVAAALENSTLIGVINQCI 155
NKQL DKERVAAA EN L+GV+++ +
Sbjct: 201 NKQLNDKERVAAACENEQLLGVVSKML 227
>sp|Q9SR25|U195B_ARATH MIP18 family protein At3g09380 OS=Arabidopsis thaliana GN=At3g09380
PE=2 SV=2
Length = 149
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 102/150 (68%), Gaps = 8/150 (5%)
Query: 7 VLENINPTLYSKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHP-LTLEELHVVD 65
VL N NP +Y K R T DQ+ TDEF S + IR+I DPEHP L+LE+L+V+
Sbjct: 4 VLTNKNPIIYPKRTRRYRT--DQSS--TDEFSS---TNRIRDIKDPEHPELSLEDLNVLT 56
Query: 66 LSLIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTE 125
++V++ + +++ FTPT+PHC + T IGL I V+L+++LPARFKV V + PGSH E
Sbjct: 57 EESVEVDDHKSYVRITFTPTLPHCHLPTHIGLCILVKLVQSLPARFKVDVRVAPGSHDKE 116
Query: 126 FAINKQLADKERVAAALENSTLIGVINQCI 155
+NKQL DKERV AALEN L+ ++N+ +
Sbjct: 117 TTVNKQLGDKERVTAALENPELVALLNKMM 146
>sp|Q9UTL0|YIVG_SCHPO MIP18 family protein C144.16 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPAC144.16 PE=3 SV=1
Length = 179
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 86/121 (71%), Gaps = 3/121 (2%)
Query: 35 DEFDSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQV--NNETNQ-IKVNFTPTIPHCSM 91
D D +EI+DL+ I DPEHPLTL +L VV L I+V N E + I V+ TPTIPHCSM
Sbjct: 52 DPIDPQEIYDLLAKINDPEHPLTLAQLSVVKLEDIEVVDNVEGDSYITVHITPTIPHCSM 111
Query: 92 ATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERVAAALENSTLIGVI 151
TLIGL IRVRL R LP RF V V++ G+H++E +NKQL DKERVAAA EN L+ V+
Sbjct: 112 CTLIGLCIRVRLERCLPPRFHVDVKVKKGTHASESQVNKQLNDKERVAAACENEQLLSVL 171
Query: 152 N 152
N
Sbjct: 172 N 172
>sp|Q9H5X1|FA96A_HUMAN MIP18 family protein FAM96A OS=Homo sapiens GN=FAM96A PE=1 SV=1
Length = 160
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 88/126 (69%), Gaps = 3/126 (2%)
Query: 36 EFDSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQV---NNETNQIKVNFTPTIPHCSMA 92
E + E++DLIR I DPE P TLEEL VV S ++V N E + + FTPT+PHCS+A
Sbjct: 34 EEKALEVYDLIRTIRDPEKPNTLEELEVVSESCVEVQEINEEEYLVIIRFTPTVPHCSLA 93
Query: 93 TLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERVAAALENSTLIGVIN 152
TLIGL +RV+L R LP + K+ + I+ G+HSTE INKQ+ DKERVAAA+EN L ++
Sbjct: 94 TLIGLCLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENPNLREIVE 153
Query: 153 QCISRP 158
QC+ P
Sbjct: 154 QCVLEP 159
>sp|Q9DCL2|FA96A_MOUSE MIP18 family protein FAM96A OS=Mus musculus GN=Fam96a PE=2 SV=1
Length = 160
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 86/121 (71%), Gaps = 3/121 (2%)
Query: 41 EIFDLIRNIYDPEHPLTLEELHVVDLSLIQV---NNETNQIKVNFTPTIPHCSMATLIGL 97
E++DLIR I DPE P TLEEL VV S ++V N + + + FTPT+PHCS+ATLIGL
Sbjct: 39 EVYDLIRTIRDPEKPNTLEELEVVTESCVEVQEINEDDYLVIIKFTPTVPHCSLATLIGL 98
Query: 98 SIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERVAAALENSTLIGVINQCISR 157
+RV+L R LP + K+ + I+ G+HSTE INKQ+ DKERVAAA+EN L ++ QC+
Sbjct: 99 CLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENPNLREIVEQCVLE 158
Query: 158 P 158
P
Sbjct: 159 P 159
>sp|Q3T0U7|FA96A_BOVIN MIP18 family protein FAM96A OS=Bos taurus GN=FAM96A PE=2 SV=1
Length = 160
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 86/121 (71%), Gaps = 3/121 (2%)
Query: 41 EIFDLIRNIYDPEHPLTLEELHVVDLSLIQV---NNETNQIKVNFTPTIPHCSMATLIGL 97
E++DLIR I DPE P TLEEL VV S ++V N + + + FTPT+PHCS+ATLIGL
Sbjct: 39 EVYDLIRTIRDPEKPNTLEELEVVTESCVEVQEINEDDYLVIIRFTPTVPHCSLATLIGL 98
Query: 98 SIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERVAAALENSTLIGVINQCISR 157
+RV+L R LP + K+ + I+ G+HSTE INKQ+ DKERVAAA+EN L ++ QC+
Sbjct: 99 CLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENPNLREIVEQCVLE 158
Query: 158 P 158
P
Sbjct: 159 P 159
>sp|Q9V968|U195B_DROME MIP18 family protein CG30152 OS=Drosophila melanogaster GN=CG30152
PE=1 SV=1
Length = 218
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 79/118 (66%), Gaps = 4/118 (3%)
Query: 42 IFDLIRNIYDPEHPLTLEELHVVDLSLIQV----NNETNQIKVNFTPTIPHCSMATLIGL 97
I+DL+R I DPE P TLE+L+VV I V + + +++ F PT+PHCS+ATLIGL
Sbjct: 97 IYDLLRGIRDPEKPCTLEDLNVVYEDGIFVMPPTRSNVSVVRIEFNPTVPHCSLATLIGL 156
Query: 98 SIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERVAAALENSTLIGVINQCI 155
IRV++ R LP K+ + I G+H TE INKQ+ DKER+AAA+EN L ++ CI
Sbjct: 157 CIRVKVERGLPHNIKLDIYIKKGAHQTEEEINKQINDKERIAAAMENPNLRDLVENCI 214
>sp|Q9GPR0|FA96A_DICDI MIP18 family protein FAM96A OS=Dictyostelium discoideum GN=fam96A
PE=3 SV=1
Length = 150
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 19/138 (13%)
Query: 38 DSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQVNNETNQ-------------------I 78
D ++FD+IR+I DPE P TLEEL VV+ I V + + I
Sbjct: 9 DKIDVFDIIRHIKDPEFPKTLEELKVVNEDWITVIDNNDINDSDDINNNNNENYKGYCFI 68
Query: 79 KVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERV 138
K+ F PT+PHC +A I L IR ++ LP R K+ + I G+H TE INKQ+ DKER+
Sbjct: 69 KILFQPTVPHCHLAPTIALCIREKIKEYLPKRSKIEIYIKKGTHQTEDEINKQINDKERI 128
Query: 139 AAALENSTLIGVINQCIS 156
AALEN + ++ +CI
Sbjct: 129 IAALENPEIFQLVKKCIK 146
>sp|Q58529|Y1129_METJA Uncharacterized protein MJ1129 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1129 PE=4 SV=1
Length = 95
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 39 SREIFDLIRNIYDPEHPLTLEELHVVDLSLI---QVNNETNQIKVNFTPTIPHCSMATLI 95
++ + ++ + DP ++ +VD+ LI +V++E N +K PT P+C +++
Sbjct: 4 KEDVLNALKTVADPHMGIS-----IVDMGLIRDVEVDDEGN-VKFKLIPTNPYC--MSVM 55
Query: 96 GLSIRVR-LIRALPARFKVVVEITPGSHSTEFAINKQLADKE 136
++ + + +++L KV E+T H E IN+ L +KE
Sbjct: 56 AMAFQAKEAVKSLEGVKKV--EVTVEGHVMEKDINEMLKEKE 95
>sp|Q03262|PGM3_YEAST Phosphoglucomutase-3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PGM3 PE=1 SV=1
Length = 622
Score = 34.3 bits (77), Expect = 0.35, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 39 SREIFDLIRNIYDPE---HPLTL-EELHVVDLSLIQVNNETNQIKVNFTPTIPHCSMATL 94
+++IFD IRN+Y PE +P ++ EE+ V+ + +++ I N PT+P + +
Sbjct: 495 TKDIFDYIRNVYTPEGASYPSSIGEEIEVLYYRDLTTGYQSDTI--NHKPTLPVDPTSQM 552
Query: 95 IGLSIR 100
I +S R
Sbjct: 553 ITVSAR 558
>sp|Q9CNV8|SUHB_PASMU Inositol-1-monophosphatase OS=Pasteurella multocida (strain Pm70)
GN=suhB PE=3 SV=1
Length = 267
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 10 NINPTLYSKCEDRPVTAEDQNDYIT--DEFDSREIFDLIRNIYDPEHPLTLEELHVVDL- 66
N+ Y + +D T + NDY+T D+ I ++IR Y P+H + EE ++
Sbjct: 17 NVIAKGYERRDDLQTTLKSTNDYVTNIDKASEEAIIEVIRKSY-PDHTIITEESGALEGK 75
Query: 67 -SLIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVR 102
S IQ + NF +PH S + ++IRV+
Sbjct: 76 DSDIQWVIDPLDGTTNFVKGLPHFS----VSIAIRVK 108
>sp|Q53SF7|COBL1_HUMAN Cordon-bleu protein-like 1 OS=Homo sapiens GN=COBLL1 PE=1 SV=2
Length = 1204
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 14/75 (18%)
Query: 8 LENINPTLYSKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDLS 67
L+ + P + SKCE P+ + + ++ S+E DL +++ D L L EL+ +D
Sbjct: 207 LQELAPIICSKCEFDPL-----HTLLLKDYQSQEPLDLTKSLND----LGLRELYAMD-- 255
Query: 68 LIQVNNETNQIKVNF 82
VN E+ QI N
Sbjct: 256 ---VNRESCQISQNL 267
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 31.2 bits (69), Expect = 3.2, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 55 PLTLEELHVVDLSLIQVNNETNQI------KVNFTPTIPHCSMATLIGLSIRVRLIRALP 108
PLTLE+L VDL +Q N I + +F IP + + +G S +++ +P
Sbjct: 4612 PLTLEDLEEVDLLYVQTLNSILHIEDSGITEESFHEMIP---LDSFVGQSADGKMVPIIP 4668
Query: 109 ARFKVVVEITPGSHSTEFAINKQLADKERVAAAL 142
+ + + E AI +L + +R AA+
Sbjct: 4669 GGNSIPLTFSNRKEYVERAIEYRLHEMDRQVAAV 4702
>sp|Q6D1Z0|GSA_ERWCT Glutamate-1-semialdehyde 2,1-aminomutase OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=hemL PE=3 SV=1
Length = 426
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 77 QIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEIT-PGSHSTEFAINKQLADK 135
++ PT P TL G I A+ A F + E+ PG H A+ QLAD
Sbjct: 281 EVMQALAPTGPVYQAGTLSGNPI------AMAAGFACLTEVAKPGVHEKLTALTNQLADG 334
Query: 136 ERVAAALENSTLIGVINQ 153
AA EN L V+NQ
Sbjct: 335 LLAAAKAENIPL--VVNQ 350
>sp|Q2YW94|F16PC_STAAB Fructose-1,6-bisphosphatase class 3 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=fbp PE=3 SV=1
Length = 654
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 30 NDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQVNNET-NQIKVNFTPTIPH 88
ND D+ ++E+ DL +Y PE L LI+ + + Q+ V + TI H
Sbjct: 74 NDIFKDKLSTKELNDLTALVYYPED----------KLQLIKCDFQNYGQLNVWYITTIEH 123
Query: 89 CSMATLIGLS----IRVRLIRALPARFKVVVE 116
+ LI R +L RALP ++ +VE
Sbjct: 124 --LIQLIKYCSSKYTRSKLRRALPEQYVFIVE 153
>sp|Q6GDS9|F16PC_STAAR Fructose-1,6-bisphosphatase class 3 OS=Staphylococcus aureus
(strain MRSA252) GN=fbp PE=3 SV=1
Length = 654
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 30 NDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQVNNET-NQIKVNFTPTIPH 88
ND D+ ++E+ DL +Y PE L LI+ + + Q+ V + TI H
Sbjct: 74 NDIFKDKLSTKELNDLTALVYYPED----------KLQLIKCDFQNYGQLNVWYITTIEH 123
Query: 89 CSMATLIGLS----IRVRLIRALPARFKVVVE 116
+ LI R +L RALP ++ +VE
Sbjct: 124 --LIQLIKYCSSKYTRSKLRRALPEQYVFIVE 153
>sp|B2VE25|GSA_ERWT9 Glutamate-1-semialdehyde 2,1-aminomutase OS=Erwinia tasmaniensis
(strain DSM 17950 / Et1/99) GN=hemL PE=3 SV=1
Length = 426
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 106 ALPARFKVVVEIT-PGSHSTEFAINKQLADKERVAAALENSTLI 148
A+ A F + E+ PG+H+T + QLAD AA EN L+
Sbjct: 304 AMAAGFACLTEVAQPGTHATLTELTNQLADGLLAAAKAENIPLV 347
>sp|B4MX21|RAD54_DROWI DNA repair and recombination protein RAD54-like OS=Drosophila
willistoni GN=okr PE=3 SV=1
Length = 784
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 129 NKQLADKERVAAALENSTLIGVINQCISR 157
N +DKER A + LIG++NQCI R
Sbjct: 365 NTDSSDKERERALEKTQELIGLVNQCIIR 393
>sp|B4JCS7|RAD54_DROGR DNA repair and recombination protein RAD54-like OS=Drosophila
grimshawi GN=okr PE=3 SV=1
Length = 786
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 129 NKQLADKERVAAALENSTLIGVINQCISR 157
N D ER A L+ LIG++NQCI R
Sbjct: 361 NADSTDTERERALLKTQELIGLVNQCIIR 389
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,445,748
Number of Sequences: 539616
Number of extensions: 2347467
Number of successful extensions: 5640
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 5612
Number of HSP's gapped (non-prelim): 32
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)