Psyllid ID: psy2811

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------11
Protein Sequence
MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYWC
Secondary Structure (PSIPRED)
ccEEccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHcccccccccHHHHHcccccccccccHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHcccccHHHHHHHHHHHHHHHccccccccccccEEEEEcccccccccccccccHHHHHHHHHHHcccHcccccHHHHHccHHHHHcccHHHHHHHHcc
Coil and Loop (DISEMBL)
msviaceqqldmsydarCDIWSLGITAIelaegdpplsdlhpmralfqiprnpppqltkrfdcVLLCDFVNECLRKDLEERPFAKEllrhpllkkgAQLAHQELTYWC
Flexible Loop (DISEMBL)
MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELlrhpllkkgaqlAHQELTYWC
Low Complexity Region (SEG)
MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYWC
Disordered region (IsUnstruct)
***IACEQQLDMSYDARCDIWSLGITAIELAEGD*****LHPMRALFQIP*****QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYW*
Disordered Region (DISOPRED)
MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP******FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYWC
Disordered Region (DISEMBL)
MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYWC
Disordered Region (DISPRO)
**VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYWC
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYWC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	108	2.2.26 [Sep-21-2011]
Q8NEV4	1616	Myosin-IIIa OS=Homo sapie	yes	N/A	0.861	0.057	0.638	4e-32
Q8K3H5	1613	Myosin-IIIa OS=Mus muscul	yes	N/A	0.861	0.057	0.617	4e-31
Q8WXR4	1341	Myosin-IIIb OS=Homo sapie	no	N/A	0.851	0.068	0.612	2e-29
Q1EG27	1305	Myosin-IIIb OS=Mus muscul	no	N/A	0.879	0.072	0.597	2e-27
Q23356	1096	Serine/threonine-protein	yes	N/A	0.814	0.080	0.535	1e-26
F1LP90	1336	Misshapen-like kinase 1 O	no	N/A	0.851	0.068	0.554	5e-25
Q9JM52	1308	Misshapen-like kinase 1 O	no	N/A	0.851	0.070	0.554	5e-25
Q8N4C8	1332	Misshapen-like kinase 1 O	no	N/A	0.851	0.069	0.554	8e-25
O95819	1239	Mitogen-activated protein	no	N/A	0.851	0.074	0.532	4e-24
P97820	1233	Mitogen-activated protein	no	N/A	0.851	0.074	0.532	5e-24

>sp|Q8NEV4|MYO3A_HUMAN Myosin-IIIa OS=Homo sapiens GN=MYO3A PE=2 SV=2

 Score =  136 bits (342), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 60/94 (63%), Positives = 73/94 (77%), Gaps = 1/94 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
           VIACEQQLD +YDARCD WSLGITAIEL +GDPPL+DLHPMRALF+IPRNPPP+L +   
Sbjct: 196 VIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPKLRQPEL 255

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 DF+++CL KD E+RP   ELL+H  + +
Sbjct: 256 WSAEFNDFISKCLTKDYEKRPTVSELLQHKFITQ 289

Probable actin-based motor with a protein kinase activity. Probably plays a role in vision and hearing.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q8K3H5|MYO3A_MOUSE Myosin-IIIa OS=Mus musculus GN=Myo3a PE=2 SV=1

 Score =  132 bits (333), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/94 (61%), Positives = 73/94 (77%), Gaps = 1/94 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
           VIACEQQLD +YDARCD WSLGITAIEL +GDPPL++LHPMRALF+IPRNPPP+L +   
Sbjct: 196 VIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLAELHPMRALFKIPRNPPPKLRQPEL 255

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 DF+++CL KD E+RP   +LL+H  + +
Sbjct: 256 WSAEFNDFISKCLTKDYEKRPTVSDLLKHKFITQ 289

Probable actin-based motor with a protein kinase activity. Probably plays a role in vision and hearing.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8WXR4|MYO3B_HUMAN Myosin-IIIb OS=Homo sapiens GN=MYO3B PE=2 SV=4

 Score =  127 bits (320), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/93 (61%), Positives = 67/93 (72%), Gaps = 1/93 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIACEQQ D SYDARCD+WSLGITAIEL +GDPPL D+HP++ LF+IPRNPPP L     
Sbjct: 202 VIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEK 261

Query: 63  -CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
            C     F+++CL KD E RP    LL HP +K
Sbjct: 262 WCEEFNHFISQCLIKDFERRPSVTHLLDHPFIK 294

Probable actin-based motor with a protein kinase activity.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1EG27|MYO3B_MOUSE Myosin-IIIb OS=Mus musculus GN=Myo3b PE=2 SV=2

 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 2/97 (2%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIACEQQ D SYDARCD+WSLGITAIEL +GDPPL ++HP++ LF+IPRNPPP L     
Sbjct: 190 VIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFEMHPVKMLFKIPRNPPPTLLHPDS 249

Query: 63  -CVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
            C     F+++CL KD E+RP    LL HP + KG Q
Sbjct: 250 WCEEFNHFISQCLIKDFEKRPSVTHLLDHPFI-KGTQ 285

Probable actin-based motor with a protein kinase activity.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q23356|MIG15_CAEEL Serine/threonine-protein kinase mig-15 OS=Caenorhabditis elegans GN=mig-15 PE=2 SV=3

 Score =  118 bits (295), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 11/99 (11%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL----- 57
           VIAC++  + +YD+R D+WSLGITA+E+AEG PPL D+HPMRALF IPRNPPP+L     
Sbjct: 197 VIACDESPEATYDSRSDLWSLGITALEMAEGHPPLCDMHPMRALFLIPRNPPPKLKRNKK 256

Query: 58  -TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
            TK+F+      F+   L KD  +RP+   LLRHP +K+
Sbjct: 257 WTKKFET-----FIETVLVKDYHQRPYTGALLRHPFIKE 290

Involved in cell migration and signal transduction. Important in several developmental processes including epidermal development, Q neuroblast migrations and muscle arm targeting. Required with ina-1/pat-3 to stabilize the commissural axons growth cone along a precise direction and are required for the cell to respond appropriately when signaling in the growth cone must change.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|F1LP90|MINK1_RAT Misshapen-like kinase 1 OS=Rattus norvegicus GN=Mink1 PE=1 SV=2

 Score =  112 bits (281), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/92 (55%), Positives = 65/92 (70%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD R DIWSLGITAIE+AEG PPL D+HPMRALF IPRNPPP+L  +  
Sbjct: 199 VIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKW 258

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                DF++ CL K    RP  ++LL+ P ++
Sbjct: 259 SKKFTDFIDTCLIKTYLSRPPTEQLLKFPFIR 290

Serine/threonine kinase which acts as a negative regulator ofRas-related Rap2-mediated signal transduction to control neuronal structure and AMPA receptor trafficking. Required for normal synaptic density, dendrite complexity, as well as surface AMPA receptor expression in hippocampal neurons. Can activate the JNK and MAPK14/p38 pathways and mediates stimulation of the stress-activated protein kinase MAPK14/p38 MAPK downstream of the Raf/ERK pathway. Phosphorylates: TANC1 upon stimulation by RAP2A, MBP and SMAD1. Has an essential function in negative selection of thymocytes, perhaps by coupling NCK1 to activation of JNK1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9JM52|MINK1_MOUSE Misshapen-like kinase 1 OS=Mus musculus GN=Mink1 PE=1 SV=3

 Score =  112 bits (281), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/92 (55%), Positives = 65/92 (70%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD R DIWSLGITAIE+AEG PPL D+HPMRALF IPRNPPP+L  +  
Sbjct: 199 VIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKW 258

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                DF++ CL K    RP  ++LL+ P ++
Sbjct: 259 SKKFTDFIDTCLIKTYLSRPPTEQLLKFPFIR 290

Serine/threonine kinase which acts as a negative regulator of Ras-related Rap2-mediated signal transduction to control neuronal structure and AMPA receptor trafficking. Required for normal synaptic density, dendrite complexity, as well as surface AMPA receptor expression in hippocampal neurons. Can activate the JNK and MAPK14/p38 pathways and mediates stimulation of the stress-activated protein kinase MAPK14/p38 MAPK downstream of the Raf/ERK pathway. Phosphorylates: TANC1 upon stimulation by RAP2A, MBP and SMAD1. Has an essential function in negative selection of thymocytes, perhaps by coupling NCK1 to activation of JNK1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8N4C8|MINK1_HUMAN Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 PE=1 SV=2

 Score =  112 bits (279), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 51/92 (55%), Positives = 65/92 (70%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD R DIWSLGITAIE+AEG PPL D+HPMRALF IPRNPPP+L  +  
Sbjct: 199 VIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKW 258

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                DF++ CL K    RP  ++LL+ P ++
Sbjct: 259 SKKFIDFIDTCLIKTYLSRPPTEQLLKFPFIR 290

Isoform 4 can activate the JNK pathway. Involved in the regulation of actin cytoskeleton reorganization, cell-matrix adhesion, cell-cell adhesion and cell migration.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O95819|M4K4_HUMAN Mitogen-activated protein kinase kinase kinase kinase 4 OS=Homo sapiens GN=MAP4K4 PE=1 SV=2

 Score =  109 bits (273), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 49/92 (53%), Positives = 65/92 (70%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD R D+WS GITAIE+AEG PPL D+HPMRALF IPRNPPP+L  +  
Sbjct: 199 VIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKW 258

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                 F+  CL K+  +RP  ++LL+HP ++
Sbjct: 259 SKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIR 290

Serine/threonine kinase that may play a role in the response to environmental stress and cytokines such as TNF-alpha. Appears to act upstream of the JUN N-terminal pathway. Phosphorylates SMAD1 on Thr-322.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P97820|M4K4_MOUSE Mitogen-activated protein kinase kinase kinase kinase 4 OS=Mus musculus GN=Map4k4 PE=1 SV=1

 Score =  109 bits (273), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 49/92 (53%), Positives = 65/92 (70%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD R D+WS GITAIE+AEG PPL D+HPMRALF IPRNPPP+L  +  
Sbjct: 198 VIACDENPDATYDYRSDLWSCGITAIEMAEGGPPLCDMHPMRALFLIPRNPPPRLKSKKW 257

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                 F+  CL K+  +RP  ++LL+HP ++
Sbjct: 258 SKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIR 289

Serine/threonine kinase that may play a role in the response to environmental stress and cytokines such as TNF-alpha. Appears to act upstream of the JUN N-terminal pathway. Phosphorylates SMAD1 on Thr-322.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
157124822	1462	myosin iii [Aedes aegypti] gi|108873857|	0.851	0.062	0.741	2e-37
157124824	1764	myosin iii [Aedes aegypti] gi|108873858|	0.851	0.052	0.741	5e-37
170043065	1484	myosin iii [Culex quinquefasciatus] gi|1	0.851	0.061	0.720	5e-36
383859995	1662	PREDICTED: myosin-IIIa [Megachile rotund	0.842	0.054	0.782	7e-36
158287548	1593	AGAP011099-PA [Anopheles gambiae str. PE	0.842	0.057	0.723	2e-35
332030214	1519	Myosin IIIA [Acromyrmex echinatior]	0.851	0.060	0.757	3e-35
328781964	1727	PREDICTED: myosin-IIIa [Apis mellifera]	0.842	0.052	0.75	5e-35
350401119	1719	PREDICTED: myosin-IIIa-like [Bombus impa	0.842	0.052	0.75	6e-35
242009401	1193	myosin IIIB, putative [Pediculus humanus	0.925	0.083	0.683	6e-35
380028233	1709	PREDICTED: myosin-IIIa [Apis florea]	0.842	0.053	0.75	6e-35

>gi|157124822|ref|XP_001660540.1| myosin iii [Aedes aegypti] gi|108873857|gb|EAT38082.1| AAEL009991-PB [Aedes aegypti]

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 69/93 (74%), Positives = 81/93 (87%), Gaps = 1/93 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPL +LHPMRALFQIPRNPPP+LT   +
Sbjct: 198 VIACEQQLDQSYDSRCDVWSIGITAIELAEGDPPLCELHPMRALFQIPRNPPPRLTHPEN 257

Query: 63  -CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
              +L DF++ECL KDLE+RPF+KEL+ HP LK
Sbjct: 258 YSAMLSDFISECLVKDLEQRPFSKELITHPFLK 290

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157124824|ref|XP_001660541.1| myosin iii [Aedes aegypti] gi|108873858|gb|EAT38083.1| AAEL009991-PA [Aedes aegypti]

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 69/93 (74%), Positives = 81/93 (87%), Gaps = 1/93 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPL +LHPMRALFQIPRNPPP+LT   +
Sbjct: 198 VIACEQQLDQSYDSRCDVWSIGITAIELAEGDPPLCELHPMRALFQIPRNPPPRLTHPEN 257

Query: 63  -CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
              +L DF++ECL KDLE+RPF+KEL+ HP LK
Sbjct: 258 YSAMLSDFISECLVKDLEQRPFSKELITHPFLK 290

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170043065|ref|XP_001849223.1| myosin iii [Culex quinquefasciatus] gi|167866482|gb|EDS29865.1| myosin iii [Culex quinquefasciatus]

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 67/93 (72%), Positives = 79/93 (84%), Gaps = 1/93 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPL +LHPMRALFQIPRNPPP+L     
Sbjct: 198 VIACEQQLDQSYDSRCDVWSIGITAIELAEGDPPLCELHPMRALFQIPRNPPPKLGHPEH 257

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
              +L DF++ECL KDLE+RPF+KEL+ HP +K
Sbjct: 258 YSAMLSDFISECLVKDLEQRPFSKELVTHPFMK 290

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859995|ref|XP_003705477.1| PREDICTED: myosin-IIIa [Megachile rotundata]

 Score =  154 bits (389), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 72/92 (78%), Positives = 75/92 (81%), Gaps = 1/92 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPLSDLHPMRALFQIPRNPPP L     
Sbjct: 206 VIACEQQLDSSYDSRCDVWSVGITAIELAEGDPPLSDLHPMRALFQIPRNPPPALKNPDI 265

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
            C  L DFV ECL KDLE RPFA EL  HPLL
Sbjct: 266 HCPELVDFVTECLVKDLEYRPFASELKEHPLL 297

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158287548|ref|XP_309547.4| AGAP011099-PA [Anopheles gambiae str. PEST] gi|157019704|gb|EAA05267.5| AGAP011099-PA [Anopheles gambiae str. PEST]

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/94 (72%), Positives = 83/94 (88%), Gaps = 3/94 (3%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KR 60
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPL +LHPMRALFQIPRNPPP+L+  ++
Sbjct: 198 VIACEQQLDQSYDSRCDVWSVGITAIELAEGDPPLCELHPMRALFQIPRNPPPKLSHPEQ 257

Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
           +   +L DF++ECL KDLE+RPF+KEL+ HP LK
Sbjct: 258 YSS-MLSDFISECLVKDLEQRPFSKELVTHPFLK 290

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030214|gb|EGI69997.1| Myosin IIIA [Acromyrmex echinatior]

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 72/95 (75%), Positives = 77/95 (81%), Gaps = 3/95 (3%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPLS+LHPMRALFQIPRNPPP L K  D
Sbjct: 206 VIACEQQLDSSYDSRCDVWSIGITAIELAEGDPPLSELHPMRALFQIPRNPPPSL-KNPD 264

Query: 63  CVL--LCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                L DF+ ECL KDLE RPFA EL  HPLL K
Sbjct: 265 IYSSELTDFIAECLVKDLEHRPFASELREHPLLTK 299

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328781964|ref|XP_393968.4| PREDICTED: myosin-IIIa [Apis mellifera]

 Score =  151 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 69/92 (75%), Positives = 74/92 (80%), Gaps = 1/92 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPLS+LHPMRALFQIPRNPPP L     
Sbjct: 206 VIACEQQLDSSYDSRCDVWSIGITAIELAEGDPPLSELHPMRALFQIPRNPPPSLKNPDI 265

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
               L DF+ ECL KDLE RPFA EL  HPLL
Sbjct: 266 HTPELVDFITECLVKDLEHRPFASELKEHPLL 297

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401119|ref|XP_003486052.1| PREDICTED: myosin-IIIa-like [Bombus impatiens]

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 69/92 (75%), Positives = 74/92 (80%), Gaps = 1/92 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPLS+LHPMRALFQIPRNPPP L     
Sbjct: 206 VIACEQQLDSSYDSRCDVWSVGITAIELAEGDPPLSELHPMRALFQIPRNPPPSLKNPDI 265

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
               L DF+ ECL KDLE RPFA EL  HPLL
Sbjct: 266 HSPELVDFITECLVKDLEHRPFASELKEHPLL 297

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242009401|ref|XP_002425476.1| myosin IIIB, putative [Pediculus humanus corporis] gi|212509312|gb|EEB12738.1| myosin IIIB, putative [Pediculus humanus corporis]

 Score =  151 bits (381), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 1/101 (0%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIACEQQ++  YDARCDIWSLGITAIELAEGDPPL +LHPMRALFQIPRNPPP L++  +
Sbjct: 198 VIACEQQMEAWYDARCDIWSLGITAIELAEGDPPLCELHPMRALFQIPRNPPPTLSRPDE 257

Query: 63  -CVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQ 102
                 DF++ECL KDLE+RP AKELL HP +K+G  +A +
Sbjct: 258 WSSEFNDFISECLVKDLEQRPVAKELLSHPFIKRGFLVAER 298

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380028233|ref|XP_003697812.1| PREDICTED: myosin-IIIa [Apis florea]

 Score =  150 bits (380), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 69/92 (75%), Positives = 74/92 (80%), Gaps = 1/92 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
           VIACEQQLD SYD+RCD+WS+GITAIELAEGDPPLS+LHPMRALFQIPRNPPP L     
Sbjct: 206 VIACEQQLDSSYDSRCDVWSIGITAIELAEGDPPLSELHPMRALFQIPRNPPPSLKNPDI 265

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
               L DF+ ECL KDLE RPFA EL  HPLL
Sbjct: 266 HTPELVDFITECLVKDLEHRPFASELKEHPLL 297

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	108
UNIPROTKB|Q8NEV4	1616	MYO3A "Myosin-IIIa" [Homo sapi	0.842	0.056	0.652	1.6e-28
UNIPROTKB|F5H0U9	664	MYO3A "Myosin-IIIa" [Homo sapi	0.842	0.137	0.652	3.8e-28
UNIPROTKB|E1C7H7	1624	MYO3A "Uncharacterized protein	0.861	0.057	0.659	5.8e-28
UNIPROTKB|H7C1M9	360	MYO3B "Myosin-IIIb" [Homo sapi	0.851	0.255	0.612	2.8e-27
UNIPROTKB|E2RQX5	1613	MYO3A "Uncharacterized protein	0.842	0.056	0.641	4.1e-27
MGI|MGI:2183924	1613	Myo3a "myosin IIIA" [Mus muscu	0.842	0.056	0.630	8.6e-27
RGD|1560083	1614	Myo3a "myosin IIIA" [Rattus no	0.842	0.056	0.630	8.6e-27
UNIPROTKB|F1PIJ2	795	MYO3B "Uncharacterized protein	0.870	0.118	0.614	1.5e-26
UNIPROTKB|F1RTW9	596	MYO3A "Uncharacterized protein	0.842	0.152	0.621	1.9e-26
UNIPROTKB|F1P7H3	913	MYO3B "Uncharacterized protein	0.870	0.102	0.614	2e-26

UNIPROTKB|Q8NEV4 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 322 (118.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
 Identities = 60/92 (65%), Positives = 72/92 (78%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
             VIACEQQLD +YDARCD WSLGITAIEL +GDPPL+DLHPMRALF+IPRNPPP+L +   
Sbjct:   196 VIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPKLRQPEL 255

Query:    62 DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
                   DF+++CL KD E+RP   ELL+H  +
Sbjct:   256 WSAEFNDFISKCLTKDYEKRPTVSELLQHKFI 287

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0050896 "response to stimulus" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0032426 "stereocilium bundle tip" evidence=IEA

GO:0032433 "filopodium tip" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA

GO:0030898 "actin-dependent ATPase activity" evidence=IDA

GO:0000146 "microfilament motor activity" evidence=IDA;IMP

GO:0060002 "plus-end directed microfilament motor activity" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0043531 "ADP binding" evidence=IDA

GO:0007605 "sensory perception of sound" evidence=IMP

GO:0030175 "filopodium" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0031941 "filamentous actin" evidence=IDA

UNIPROTKB|F5H0U9 MYO3A "Myosin-IIIa" [Homo sapiens (taxid:9606)]

 Score = 322 (118.4 bits), Expect = 3.8e-28, P = 3.8e-28
 Identities = 60/92 (65%), Positives = 72/92 (78%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
             VIACEQQLD +YDARCD WSLGITAIEL +GDPPL+DLHPMRALF+IPRNPPP+L +   
Sbjct:   196 VIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPKLRQPEL 255

Query:    62 DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
                   DF+++CL KD E+RP   ELL+H  +
Sbjct:   256 WSAEFNDFISKCLTKDYEKRPTVSELLQHKFI 287

GO:0003774 "motor activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1C7H7 MYO3A "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 327 (120.2 bits), Expect = 5.8e-28, P = 5.8e-28
 Identities = 62/94 (65%), Positives = 72/94 (76%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
             VIACEQQLD SYDARCD WSLGITAIEL +GDPPL+DLHPMRALF+IPRNPPP L +   
Sbjct:   196 VIACEQQLDSSYDARCDAWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLQQPEL 255

Query:    62 DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                   DF+N+CL KD E+RP    LL+H  +K+
Sbjct:   256 WSSEFNDFINKCLTKDYEKRPTVSSLLQHDFIKQ 289

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0030898 "actin-dependent ATPase activity" evidence=IEA

GO:0031941 "filamentous actin" evidence=IEA

GO:0032426 "stereocilium bundle tip" evidence=IEA

GO:0032433 "filopodium tip" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA

GO:0060002 "plus-end directed microfilament motor activity" evidence=IEA

UNIPROTKB|H7C1M9 MYO3B "Myosin-IIIb" [Homo sapiens (taxid:9606)]

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 57/93 (61%), Positives = 67/93 (72%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
             VIACEQQ D SYDARCD+WSLGITAIEL +GDPPL D+HP++ LF+IPRNPPP L     
Sbjct:   202 VIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEK 261

Query:    63 -CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
              C     F+++CL KD E RP    LL HP +K
Sbjct:   262 WCEEFNHFISQCLIKDFERRPSVTHLLDHPFIK 294

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2RQX5 MYO3A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 319 (117.4 bits), Expect = 4.1e-27, P = 4.1e-27
 Identities = 59/92 (64%), Positives = 72/92 (78%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
             VIACEQQLD +YDARCD WSLGITAIEL +GDPPL+DLHPMRALF+IPRNPPP+L +   
Sbjct:   196 VIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPKLRQPEI 255

Query:    62 DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
                   DF+++CL KD E+RP   +LL+H  +
Sbjct:   256 WSAEFNDFISKCLTKDYEKRPTVSDLLQHKFI 287

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

MGI|MGI:2183924 Myo3a "myosin IIIA" [Mus musculus (taxid:10090)]

 Score = 316 (116.3 bits), Expect = 8.6e-27, P = 8.6e-27
 Identities = 58/92 (63%), Positives = 72/92 (78%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
             VIACEQQLD +YDARCD WSLGITAIEL +GDPPL++LHPMRALF+IPRNPPP+L +   
Sbjct:   196 VIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLAELHPMRALFKIPRNPPPKLRQPEL 255

Query:    62 DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
                   DF+++CL KD E+RP   +LL+H  +
Sbjct:   256 WSAEFNDFISKCLTKDYEKRPTVSDLLKHKFI 287

GO:0000146 "microfilament motor activity" evidence=ISO;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IDA

GO:0003774 "motor activity" evidence=IEA

GO:0003779 "actin binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005516 "calmodulin binding" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=ISO;IMP

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IDA

GO:0030175 "filopodium" evidence=ISO

GO:0030898 "actin-dependent ATPase activity" evidence=ISO

GO:0031941 "filamentous actin" evidence=ISO

GO:0032426 "stereocilium bundle tip" evidence=IDA

GO:0032433 "filopodium tip" evidence=IDA

GO:0043531 "ADP binding" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=ISO;IDA

GO:0048839 "inner ear development" evidence=IMP

GO:0050896 "response to stimulus" evidence=IEA

GO:0051015 "actin filament binding" evidence=IDA

GO:0051491 "positive regulation of filopodium assembly" evidence=IGI

GO:0060002 "plus-end directed microfilament motor activity" evidence=ISO

RGD|1560083 Myo3a "myosin IIIA" [Rattus norvegicus (taxid:10116)]

 Score = 316 (116.3 bits), Expect = 8.6e-27, P = 8.6e-27
 Identities = 58/92 (63%), Positives = 72/92 (78%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
             VIACEQQLD +YDARCD WSLGITAIEL +GDPPL++LHPMRALF+IPRNPPP+L +   
Sbjct:   196 VIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLAELHPMRALFKIPRNPPPKLRQPEL 255

Query:    62 DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
                   DF+++CL KD E+RP   +LL+H  +
Sbjct:   256 WSAEFNDFISKCLTKDYEKRPTVSDLLKHKFI 287

GO:0000146 "microfilament motor activity" evidence=ISO

GO:0001917 "photoreceptor inner segment" evidence=IEA;ISO

GO:0003674 "molecular_function" evidence=ND

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0005516 "calmodulin binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0007605 "sensory perception of sound" evidence=IEA;ISO

GO:0008150 "biological_process" evidence=ND

GO:0016459 "myosin complex" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA;ISO

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA;ISO

GO:0030175 "filopodium" evidence=ISO

GO:0030898 "actin-dependent ATPase activity" evidence=IEA;ISO

GO:0031941 "filamentous actin" evidence=IEA;ISO

GO:0032426 "stereocilium bundle tip" evidence=IEA;ISO

GO:0032433 "filopodium tip" evidence=IEA;ISO

GO:0043531 "ADP binding" evidence=IEA;ISO

GO:0046777 "protein autophosphorylation" evidence=IEA;ISO

GO:0048839 "inner ear development" evidence=IEA;ISO

GO:0051015 "actin filament binding" evidence=IEA;ISO

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA;ISO

GO:0060002 "plus-end directed microfilament motor activity" evidence=IEA;ISO

UNIPROTKB|F1PIJ2 MYO3B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 309 (113.8 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 59/96 (61%), Positives = 70/96 (72%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
             VIACEQQ D SYDARCD+WSLGITAIEL +GDPPL D+HP++ LF+IPRNPPP L    +
Sbjct:    71 VIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEE 130

Query:    63 -CVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA 97
              C     F++ CL KD E+RP    LL HP +K GA
Sbjct:   131 WCEEFNHFISRCLIKDFEKRPSVTHLLDHPFIK-GA 165

GO:0016459 "myosin complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

UNIPROTKB|F1RTW9 MYO3A "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 305 (112.4 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 59/95 (62%), Positives = 71/95 (74%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RF 61
             VIACEQQLD +YDARCD WSLGITAIEL +GDPPL+DLHPMRALF+IPRNPPP+L +   
Sbjct:   196 VIACEQQLDTTYDARCDTWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPKLRQPEL 255

Query:    62 DCVLLCDFVNE---CLRKDLEERPFAKELLRHPLL 93
                   DF++    CL KD E+RP   +LL+H  +
Sbjct:   256 WSAEFNDFISNQCRCLTKDYEKRPTVSDLLQHKFI 290

GO:0060002 "plus-end directed microfilament motor activity" evidence=IEA

GO:0051491 "positive regulation of filopodium assembly" evidence=IEA

GO:0051015 "actin filament binding" evidence=IEA

GO:0048839 "inner ear development" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043531 "ADP binding" evidence=IEA

GO:0032433 "filopodium tip" evidence=IEA

GO:0032426 "stereocilium bundle tip" evidence=IEA

GO:0031941 "filamentous actin" evidence=IEA

GO:0030898 "actin-dependent ATPase activity" evidence=IEA

GO:0018107 "peptidyl-threonine phosphorylation" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0007605 "sensory perception of sound" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0001917 "photoreceptor inner segment" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

UNIPROTKB|F1P7H3 MYO3B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 309 (113.8 bits), Expect = 2.0e-26, P = 2.0e-26
 Identities = 59/96 (61%), Positives = 70/96 (72%)

Query:     3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
             VIACEQQ D SYDARCD+WSLGITAIEL +GDPPL D+HP++ LF+IPRNPPP L    +
Sbjct:   189 VIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEE 248

Query:    63 -CVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA 97
              C     F++ CL KD E+RP    LL HP +K GA
Sbjct:   249 WCEEFNHFISRCLIKDFEKRPSVTHLLDHPFIK-GA 283

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016459 "myosin complex" evidence=IEA

GO:0003774 "motor activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q23356	MIG15_CAEEL	2, ., 7, ., 1, 1, ., 1	0.5353	0.8148	0.0802	yes	N/A
Q8K3H5	MYO3A_MOUSE	2, ., 7, ., 1, 1, ., 1	0.6170	0.8611	0.0576	yes	N/A
Q8NEV4	MYO3A_HUMAN	2, ., 7, ., 1, 1, ., 1	0.6382	0.8611	0.0575	yes	N/A
O61122	SVKA_DICDI	2, ., 7, ., 1, 1, ., 1	0.5432	0.7407	0.1673	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	108
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-51
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-41
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-41
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-39
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-36
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-34
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-33
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-33
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-31
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	8e-31
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-29
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-28
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	4e-27
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-25
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-24
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-23
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-23
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-22
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-21
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-20
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-20
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	5e-20
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-19
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-19
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	5e-19
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	6e-19
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-19
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-18
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-18
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-18
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	9e-18
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-17
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-17
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-17
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	6e-17
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-16
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	5e-16
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-15
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-15
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	3e-14
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	6e-14
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-13
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-13
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-12
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-12
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-12
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	9e-12
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-11
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	5e-11
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	6e-11
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-10
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	7e-10
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	8e-10
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	9e-10
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-09
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-09
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	9e-09
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-08
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-08
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	1e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-07
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	5e-07
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	7e-07
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	8e-07
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	1e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	5e-06
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-05
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-05
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-04
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-04
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-04
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-04
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	0.001
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	0.002
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.002
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	0.003
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.004

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  162 bits (411), Expect = 3e-51
 Identities = 60/97 (61%), Positives = 75/97 (77%), Gaps = 11/97 (11%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL----- 57
           VIAC++Q D SYDAR D+WSLGITAIELA+G PPL D+HPMRALF+IPRNPPP L     
Sbjct: 184 VIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPEN 243

Query: 58  -TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
            +K+F+     DF++ECL K+ E+RPF +ELL HP +
Sbjct: 244 WSKKFN-----DFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score =  137 bits (345), Expect = 2e-41
 Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 11/94 (11%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL----- 57
           VIACEQQLD +YDARCD+WSLGITAIEL +GDPPL+DLHPMRALF+IPRNPPP L     
Sbjct: 195 VIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPEL 254

Query: 58  -TKRFDCVLLCDFVNECLRKDLEERPFAKELLRH 90
            +  F+     DF+ +CL KD E+RP   +LL+H
Sbjct: 255 WSNEFN-----DFIRKCLTKDYEKRPTVSDLLQH 283

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  136 bits (344), Expect = 4e-41
 Identities = 52/83 (62%), Positives = 60/83 (72%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
            YD + DIWSLGITAIELA+G+PPLSDLHPMR LF IP+N PP L          DFV+ 
Sbjct: 174 GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSL 233

Query: 73  CLRKDLEERPFAKELLRHPLLKK 95
           CL KD +ERP AKELL+H  +KK
Sbjct: 234 CLNKDPKERPSAKELLKHKFIKK 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score =  132 bits (334), Expect = 1e-39
 Identities = 57/93 (61%), Positives = 67/93 (72%), Gaps = 1/93 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIACEQQ D SYDARCD+WSLGITAIEL +GDPPL D+HP++ LF+IPRNPPP L     
Sbjct: 199 VIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEK 258

Query: 63  -CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
            C     F+++CL KD E RP    LL HP +K
Sbjct: 259 WCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  123 bits (311), Expect = 2e-36
 Identities = 48/86 (55%), Positives = 59/86 (68%), Gaps = 11/86 (12%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT------KRFDCVLLC 67
           Y+ + DIWSLGITAIE+AEG PP SD+HPMRA+F IP  PPP L+        F+     
Sbjct: 176 YNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFN----- 230

Query: 68  DFVNECLRKDLEERPFAKELLRHPLL 93
           DFV +CL KD EERP A +LL+HP +
Sbjct: 231 DFVKKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score =  119 bits (299), Expect = 2e-34
 Identities = 52/91 (57%), Positives = 65/91 (71%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD R DIWSLGITAIE+AEG PPL D+HPMRALF IPRNPPP+L  +  
Sbjct: 192 VIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKW 251

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
                DF+  CL K+   RP  ++LL+HP +
Sbjct: 252 SKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  116 bits (293), Expect = 1e-33
 Identities = 46/89 (51%), Positives = 59/89 (66%), Gaps = 1/89 (1%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFD 62
           +A E      YD + DIWSLGITAIELAEG PP S+L PM+ALF+I  N PP L      
Sbjct: 164 MAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKW 223

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHP 91
                DF+ +CL+K+ E+RP A++LL+HP
Sbjct: 224 SDEFKDFLKKCLQKNPEKRPTAEQLLKHP 252

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  116 bits (292), Expect = 2e-33
 Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 5/92 (5%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN--PPPQLT-K 59
           V A E++    YD +CDIW+LGITAIELAE  PP+ DLHPMRALF I ++  PPP+L  K
Sbjct: 172 VAAVERKGG--YDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDK 229

Query: 60  RFDCVLLCDFVNECLRKDLEERPFAKELLRHP 91
                +  DF+ +CL KD ++RP A +LL+HP
Sbjct: 230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  109 bits (276), Expect = 7e-31
 Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 3/84 (3%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL--TKRFDCVLLCDFVN 71
           Y  + DIWSLGI  IE+AEG+PP     P+RALF I     P L   +++      DF+N
Sbjct: 193 YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWS-PEFKDFLN 251

Query: 72  ECLRKDLEERPFAKELLRHPLLKK 95
           +CL KD E+RP A+ELL+HP LKK
Sbjct: 252 KCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score =  109 bits (274), Expect = 8e-31
 Identities = 47/91 (51%), Positives = 64/91 (70%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD + D+WSLGITAIE+AEG PPL D+HPMRALF IPRNP P+L  +  
Sbjct: 182 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW 241

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
                 F+  CL K+  +RP  ++L++HP +
Sbjct: 242 SKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score =  105 bits (263), Expect = 4e-29
 Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD++ DIWSLGITAIELA+G+PP SD+HPMR LF IP+N PP LT  F      +F++ 
Sbjct: 177 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFK-EFIDA 235

Query: 73  CLRKDLEERPFAKELLRHPLLKKGAQ 98
           CL KD   RP AKELL+H  + K A+
Sbjct: 236 CLNKDPSFRPTAKELLKHKFIVKNAK 261

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  103 bits (259), Expect = 2e-28
 Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 11/95 (11%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL----- 57
           V+ACE   D  YD + DIWSLGIT IELA+ +PP  +L+PMR L +I ++ PP L     
Sbjct: 174 VVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSK 233

Query: 58  -TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHP 91
            +  F+     DF+  CL KD ++RP A ELL+HP
Sbjct: 234 WSSSFN-----DFLKSCLVKDPDDRPTAAELLKHP 263

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score =  100 bits (249), Expect = 4e-27
 Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD + DIWSLGITAIELA+G+PP SDLHPMR LF IP+N PP L  ++      +FV  
Sbjct: 177 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFK-EFVEA 235

Query: 73  CLRKDLEERPFAKELLRHPLLKK 95
           CL KD   RP AKELL+H  + +
Sbjct: 236 CLNKDPRFRPTAKELLKHKFITR 258

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 96.7 bits (240), Expect = 1e-25
 Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD++ DIWSLGITAIELA+G+PP S+LHPM+ LF IP+N PP L   +   L  +FV  
Sbjct: 177 AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLK-EFVEA 235

Query: 73  CLRKDLEERPFAKELLRHPLLKKGAQ 98
           CL K+   RP AKELL+H  + + A+
Sbjct: 236 CLNKEPSFRPTAKELLKHKFIVRFAK 261

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 93.1 bits (232), Expect = 1e-24
 Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 1/74 (1%)

Query: 18  CDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD 77
            DIWSLG T IEL  G+PP  DL+PM ALF+I ++  P L +      L DF+ +C +KD
Sbjct: 180 SDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGIS-PELKDFLMQCFQKD 238

Query: 78  LEERPFAKELLRHP 91
              RP AK+LL+HP
Sbjct: 239 PNLRPTAKQLLKHP 252

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 90.3 bits (224), Expect = 3e-23
 Identities = 35/82 (42%), Positives = 53/82 (64%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD + D+WSLGIT IELAE  PPL +++ M AL+ I +N  P L+         +FV+ C
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSC 250

Query: 74  LRKDLEERPFAKELLRHPLLKK 95
           L+K  ++RP ++ELL+H  + +
Sbjct: 251 LQKIPQDRPSSEELLKHRFVLR 272

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 89.7 bits (223), Expect = 3e-23
 Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 6/83 (7%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-----TKRFDCVLLCD 68
           YD + DIWS GITAIELA G  P S   PM+ L    +N PP L      K++       
Sbjct: 184 YDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFR-K 242

Query: 69  FVNECLRKDLEERPFAKELLRHP 91
            ++ CL+KD  +RP A+ELL+H 
Sbjct: 243 MISLCLQKDPSKRPTAEELLKHK 265

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 85.7 bits (213), Expect = 8e-22
 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           +A E  L   Y    DIWSLG+   EL  G PP      +  LF+    P P        
Sbjct: 163 MAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD 222

Query: 64  V--LLCDFVNECLRKDLEERPFAKELLRHPLL 93
           +     D + + L KD E+R  A+E L+HP  
Sbjct: 223 ISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 85.2 bits (211), Expect = 2e-21
 Identities = 37/82 (45%), Positives = 52/82 (63%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
            YD + DIWSLGIT  E+A G+PP SD+   RA+  IP++ PP+L       LL +FV  
Sbjct: 178 YYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAA 237

Query: 73  CLRKDLEERPFAKELLRHPLLK 94
           CL ++ +ER  A+ELL+   +K
Sbjct: 238 CLDEEPKERLSAEELLKSKWIK 259

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 83.4 bits (206), Expect = 1e-20
 Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC-DFVN 71
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N
Sbjct: 191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 250

Query: 72  ECLRKDLEERPFAKELLRHPLLKKGAQLA 100
            CL  D+E+R  AKELL+HP LK    L+
Sbjct: 251 RCLEMDVEKRGSAKELLQHPFLKIAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 82.8 bits (204), Expect = 2e-20
 Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 1/94 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           V+ CE   D  YD + DIWSLGIT IE+A+ +PP  +L+PMR L +I ++ PP L++   
Sbjct: 181 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSK 240

Query: 63  CVL-LCDFVNECLRKDLEERPFAKELLRHPLLKK 95
             +   DF+   L K  E RP A +LL HP +  
Sbjct: 241 WSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 81.7 bits (201), Expect = 5e-20
 Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 3/90 (3%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFV 70
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L   +R   V   DF+
Sbjct: 191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFR-DFL 249

Query: 71  NECLRKDLEERPFAKELLRHPLLKKGAQLA 100
           N CL  D++ R  AKELL+HP LK    L+
Sbjct: 250 NRCLEMDVDRRGSAKELLQHPFLKLAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 80.5 bits (198), Expect = 1e-19
 Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 1/89 (1%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFVN 71
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N
Sbjct: 191 AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLN 250

Query: 72  ECLRKDLEERPFAKELLRHPLLKKGAQLA 100
            CL  D+E+R  AKELL+HP LK    L+
Sbjct: 251 RCLEMDVEKRGSAKELLQHPFLKLAKPLS 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 79.7 bits (196), Expect = 3e-19
 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 3/104 (2%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--R 60
           V+ CE   D  YD + D+WSLGIT IE+A+ +PP  +L+PMR L +I ++ PP L +  R
Sbjct: 174 VVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 233

Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
           +      DF+ +CL K+++ R    +LL+HP +   +    +EL
Sbjct: 234 WSSEFK-DFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKPIREL 276

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 78.8 bits (194), Expect = 5e-19
 Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 3/82 (3%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIP--RNPPPQLTKRFDCVLLCDFVN 71
           Y  + DIWS+G T  E+A G PPL+ +  + A+F I   R   P+L   F    + DFV 
Sbjct: 185 YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAI-DFVT 243

Query: 72  ECLRKDLEERPFAKELLRHPLL 93
            CL +D  ERP A +LLRH  L
Sbjct: 244 SCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 78.6 bits (194), Expect = 6e-19
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 7/89 (7%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTK-RF--DCVLLCDF 69
           YD + D+WSLGIT IELA G  P      P + L Q+   P PQL   +F  +     DF
Sbjct: 184 YDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQ---DF 240

Query: 70  VNECLRKDLEERPFAKELLRHPLLKKGAQ 98
           VN+CL+K+ +ERP   ELL+HP  +    
Sbjct: 241 VNKCLKKNYKERPNYPELLQHPFFELHLS 269

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 78.1 bits (193), Expect = 6e-19
 Identities = 40/91 (43%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 13  SYDARCDIWSLGITAIELA--------EGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV 64
            Y  + DIWSLG++ IELA        E DPP         L  I   PPP+L       
Sbjct: 175 DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIF---ELLQYIVNEPPPRLPSGKFSP 231

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
              DFVN CL KD  ERP  KELL HP +KK
Sbjct: 232 DFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 77.4 bits (190), Expect = 2e-18
 Identities = 39/82 (47%), Positives = 54/82 (65%), Gaps = 3/82 (3%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN--PPPQLTKRFDCV-LLCDFV 70
           Y+  CDIW++GITAIELAE  PP+ DLHPMRALF + ++   PP+L  +         FV
Sbjct: 186 YNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFV 245

Query: 71  NECLRKDLEERPFAKELLRHPL 92
              L K+ ++RP A++LL+HP 
Sbjct: 246 KMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 76.8 bits (190), Expect = 2e-18
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 3/85 (3%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNP-PPQLTKRFDCVLLCD 68
              Y    DIWSLG T IE+A G PP S+L  PM AL++I  +  PP++ +        D
Sbjct: 177 GEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAK-D 235

Query: 69  FVNECLRKDLEERPFAKELLRHPLL 93
           F+ +CLR+D ++RP A ELL+HP L
Sbjct: 236 FLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 77.5 bits (190), Expect = 2e-18
 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD-CVLLCDFVN 71
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251

Query: 72  ECLRKDLEERPFAKELLRHPLLKKGAQLA 100
            CL  D+E+R  AKELL+H  LK    L+
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFLKIAKPLS 280

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 75.2 bits (185), Expect = 9e-18
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 10/86 (11%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP-----PPQLTKRFDCVLLC 67
            Y    DIWSLG T +E+A G PP S L  + A+F+I R+      P  L+         
Sbjct: 178 GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDE-----AK 232

Query: 68  DFVNECLRKDLEERPFAKELLRHPLL 93
           DF+ +CL++D   RP A ELL HP +
Sbjct: 233 DFILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 75.4 bits (185), Expect = 1e-17
 Identities = 37/82 (45%), Positives = 51/82 (62%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD + D+WSLGIT IELAE  PPL +++ M AL+ I +N  P L           FV+ C
Sbjct: 197 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYC 256

Query: 74  LRKDLEERPFAKELLRHPLLKK 95
           L+K  +ERP + ELLRH  +++
Sbjct: 257 LQKIPQERPASAELLRHDFVRR 278

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 75.2 bits (185), Expect = 1e-17
 Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC-VLLCDFVNE 72
           Y    DIWSLGI  IE+ +G+PP  +  P++A+ +I  N PP+L         L  F++ 
Sbjct: 192 YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDR 251

Query: 73  CLRKDLEERPFAKELLRHPLLKK 95
            L +D  +R  A ELL HP L K
Sbjct: 252 MLVRDPAQRATAAELLNHPFLAK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 73.9 bits (181), Expect = 3e-17
 Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 3/80 (3%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN--PPPQLTKRFD-CVLLCDFV 70
           Y+  CDIW++GITAIELAE  PP+ DLHPMRALF + ++   PP+L  +        +FV
Sbjct: 186 YNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFV 245

Query: 71  NECLRKDLEERPFAKELLRH 90
              L K+ ++RP A+ LL H
Sbjct: 246 KISLTKNPKKRPTAERLLTH 265

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 73.6 bits (180), Expect = 6e-17
 Identities = 35/77 (45%), Positives = 50/77 (64%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD + D+WSLGIT IELAE  PPL +++ M AL+ I +N  P L          +FV+ C
Sbjct: 201 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSC 260

Query: 74  LRKDLEERPFAKELLRH 90
           L+K  ++RP ++ELL+H
Sbjct: 261 LQKIPQDRPTSEELLKH 277

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 71.2 bits (175), Expect = 3e-16
 Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIPRNPPPQLTKRFDCVL---LCDF 69
           YD R D+WSLGIT  E+A G  P    + +   L Q+ +  PP L+   +        +F
Sbjct: 187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNF 246

Query: 70  VNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYWC 108
           +N CL KD  +RP  KELL HP +K   +       Y  
Sbjct: 247 INLCLIKDESKRPKYKELLEHPFIKDYEERNVDVAAYVQ 285

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 71.2 bits (174), Expect = 4e-16
 Identities = 34/82 (41%), Positives = 51/82 (62%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD + D+WSLGIT IELAE  PPL +++ M AL+ I +N  P L          +FV+ C
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 250

Query: 74  LRKDLEERPFAKELLRHPLLKK 95
           L+K  ++RP ++ LL+H  + +
Sbjct: 251 LQKIPQDRPTSEVLLKHRFVLR 272

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 70.4 bits (173), Expect = 5e-16
 Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 9/87 (10%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC------ 67
           Y  + D+WSLG+   EL  G PP S  + +  L  I R   P L   FD           
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPL--EFDEPKWSSGSEEA 233

Query: 68  -DFVNECLRKDLEERPFAKELLRHPLL 93
            D + +CL KD  +RP A+E+L+HP  
Sbjct: 234 KDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 3/87 (3%)

Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDLH---PMRALFQIPRNPPPQLTKRFDCVLLCD 68
            SY    DIWSLG+T +E A G  P            +  I   PPP L          D
Sbjct: 175 ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRD 234

Query: 69  FVNECLRKDLEERPFAKELLRHPLLKK 95
           F++ CL+KD ++RP A ELL+HP +KK
Sbjct: 235 FISACLQKDPKKRPSAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 69.5 bits (170), Expect = 1e-15
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 2/79 (2%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP-PQLTKRFDCVLLCDFVNE 72
           Y  + D+WS+G T +E+    PP ++   M A+F+I   P  PQL          +F+  
Sbjct: 184 YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVS-PDARNFLRR 242

Query: 73  CLRKDLEERPFAKELLRHP 91
              ++ ++RP A+ELLRH 
Sbjct: 243 TFVENAKKRPSAEELLRHF 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 66.2 bits (162), Expect = 3e-14
 Identities = 34/123 (27%), Positives = 45/123 (36%), Gaps = 39/123 (31%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLL 66
           +Q L   Y+ + DI+S+GITA ELA G  P  D+   + L +  R   P L    D    
Sbjct: 181 QQNL-QGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCL---LDKSTY 236

Query: 67  C-----------------------------------DFVNECLRKDLEERPFAKELLRHP 91
                                                FV  CL++D E RP A +LL H 
Sbjct: 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296

Query: 92  LLK 94
             K
Sbjct: 297 FFK 299

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 65.1 bits (159), Expect = 6e-14
 Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQL--TKRFDCVLLCDF 69
            YD R D+WSLGI+ +ELA G  P  +       L +I +  PP L   + F     C F
Sbjct: 194 KYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFS-PDFCSF 252

Query: 70  VNECLRKDLEERPFAKELLRHPLLK 94
           V+ CL KD  +RP  +ELL+HP ++
Sbjct: 253 VDLCLTKDHRKRPKYRELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 63.1 bits (153), Expect = 3e-13
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFV 70
           + Y    DIWSLGI  IE+ +G+PP  +  P++A+  I  N PP+L         L  F+
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFL 250

Query: 71  NECLRKDLEERPFAKELLRHPLLKKGA 97
           +  L +D  +R  A ELL+HP L K  
Sbjct: 251 DRLLVRDPAQRATAAELLKHPFLAKAG 277

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 62.7 bits (152), Expect = 6e-13
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 3/82 (3%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV--LLCDFVN 71
           Y    DIWSLGI  IE+ +G+PP     P++A+ ++  +PPP+L K    +  +L DF+ 
Sbjct: 194 YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL-KNAHKISPVLRDFLE 252

Query: 72  ECLRKDLEERPFAKELLRHPLL 93
             L ++ +ER  A+ELL HP L
Sbjct: 253 RMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 61.4 bits (149), Expect = 1e-12
 Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 13/106 (12%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSD--------LHPM---RALFQIPRNPPPQLTK-RF 61
           Y  + D+WSLGI+ IELA G  P +           PM     L QI + PPP+L    F
Sbjct: 179 YTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDF 238

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYW 107
              L  DFV+ CL KD  ERP  ++L   P   +  + ++ +L  W
Sbjct: 239 PEDLR-DFVDACLLKDPTERPTPQQLCAMPPFIQALRASNVDLQAW 283

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 60.6 bits (147), Expect = 2e-12
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 9/94 (9%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNP--PPQL 57
           VI    Q    Y A+ DIWSLG   +E+  G  P SD   + A+F++      P  PP +
Sbjct: 181 VIHSYSQ---GYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDV 237

Query: 58  TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHP 91
           +     V L DF+N C   + + RP A+ELL+HP
Sbjct: 238 SMNLSPVAL-DFLNACFTINPDNRPTARELLQHP 270

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 60.2 bits (146), Expect = 3e-12
 Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 13  SYDARCDIWSLGITAIELAEGD---PPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDF 69
           +Y  + D+WSLG++ +E+A G    PP +  +    L  I    PP L   +      DF
Sbjct: 183 TYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQ-DF 241

Query: 70  VNECLRKDLEERPFAKELLRHPLLKK 95
           V +CL K    RP   +LL HP L K
Sbjct: 242 VAKCLNKIPNRRPTYAQLLEHPWLVK 267

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 59.0 bits (143), Expect = 9e-12
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 26/100 (26%)

Query: 13  SYDARCDIWSLGITAIELA--------EGDPPLSDLHPMRALFQIPRNPPPQL------- 57
            Y    D+WSLG+T +E+A        EG+PPL    P+  L  I   P P+L       
Sbjct: 179 PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG---PIELLSYIVNMPNPELKDEPGNG 235

Query: 58  ---TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
              ++ F      DF+ +CL KD   RP   ++L HP +K
Sbjct: 236 IKWSEEFK-----DFIKQCLEKDPTRRPTPWDMLEHPWIK 270

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 58.1 bits (140), Expect = 2e-11
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC-VLLCDFV 70
           + Y    DIWSLGI  IE+ +G+PP  +  P++A+ +I  N PP++        +L  F+
Sbjct: 193 LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFL 252

Query: 71  NECLRKDLEERPFAKELLRHPLLK 94
           +  L ++  +R  A+ELL+HP LK
Sbjct: 253 DLMLVREPSQRATAQELLQHPFLK 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 55.9 bits (135), Expect = 5e-11
 Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 8/88 (9%)

Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVL------ 65
            SY  + DI+SLGIT  E  + + P ++   + A+ +I  N  P    R    L      
Sbjct: 79  QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLEGVSAA 138

Query: 66  --LCDFVNECLRKDLEERPFAKELLRHP 91
               DF+  C  +  + R  A   L H 
Sbjct: 139 RSFEDFMRLCASRLPQRREAANHYLAHC 166

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 57.1 bits (138), Expect = 6e-11
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 37/130 (28%)

Query: 14  YDARCDIWSLGITAIELAEG----------------DPPLSDL-----------HPMR-- 44
           Y  + DIWSLG++ +E+A G                  P+S+            HP    
Sbjct: 175 YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234

Query: 45  ---ALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA 97
              A+F+    I   PPP+L          DFV++CL+K+ +ER   KEL +HP +K+ A
Sbjct: 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR-A 293

Query: 98  QLAHQELTYW 107
           +L   +   W
Sbjct: 294 ELEEVDFAGW 303

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 55.4 bits (134), Expect = 2e-10
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 18  CDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQLTKRFDCVLLC-DFVNECLR 75
            DIWSLG   +E+A G  P S+L +  + +F +     P +           DF++ CL 
Sbjct: 187 ADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLE 246

Query: 76  KDLEERPFAKELLRHP 91
            D ++RP A ELL+HP
Sbjct: 247 SDPKKRPTASELLQHP 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 53.7 bits (129), Expect = 7e-10
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN----PPPQLTKRFDCVLLCD 68
           SY  + DIWSLG   +E+  G  P  D   ++A+F+I  N     P  ++         D
Sbjct: 188 SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSEAI-----D 242

Query: 69  FVNECLRKDLEERPFAKELLRHPLL 93
           F+ +    D  +RP A ELL+HP L
Sbjct: 243 FLEKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 53.5 bits (128), Expect = 8e-10
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 11/84 (13%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNP--PPQLTKRFDCVLLCD 68
           Y  + D+WSLG T +E+    PP ++   M A+F+I   P NP  P  +++     L C 
Sbjct: 186 YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFLGCI 245

Query: 69  FVNECLRKDLEERPFAKELLRHPL 92
           FV      +   RP A+ELLRHP 
Sbjct: 246 FV------EARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 53.7 bits (129), Expect = 9e-10
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 11/86 (12%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQI---PRNP--PPQLTKRFDCVLLC 67
           Y A  DIWSLG T +E+A G PP  +L  P  A+F++     +P  P  L+         
Sbjct: 188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAK----- 242

Query: 68  DFVNECLRKDLEERPFAKELLRHPLL 93
           +F+  C   D ++R  A +LL+ P L
Sbjct: 243 NFILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 53.1 bits (127), Expect = 1e-09
 Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 17/85 (20%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNP--PPQLTKRFDCVLLCD 68
           Y  + DIWS+G T +E+    PP ++   M A+F+I   P NP  PP ++         D
Sbjct: 186 YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVS---------D 236

Query: 69  FVNECLRK---DLEERPFAKELLRH 90
              + L++   + + RP A ELLRH
Sbjct: 237 HCRDFLKRIFVEAKLRPSADELLRH 261

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 52.2 bits (125), Expect = 3e-09
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPL-SDLHP--MRALFQIPR-NPPPQLTKRFDCVLLCD 68
            Y   CD+WS+G   IE+A   PP  ++ H   +  +F+I      P + +     L  D
Sbjct: 184 QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLR-D 242

Query: 69  FVNECLRKDLEERPFAKELLRHPLLK 94
               CL    E+RP ++ELL+HP+ +
Sbjct: 243 VTLRCLELQPEDRPPSRELLKHPVFR 268

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 52.4 bits (124), Expect = 3e-09
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 11/93 (11%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI--------PRNPPPQLTKRFDCV 64
              +  DIWSLGIT  EL  G PP        A  Q           +    L+     +
Sbjct: 187 YASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPEL 246

Query: 65  LLC---DFVNECLRKDLEERPFAKELLRHPLLK 94
           +     D + + L KD + R  +   L H LL 
Sbjct: 247 ISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 50.7 bits (122), Expect = 9e-09
 Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 23/98 (23%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-----RF 61
           EQ   MSYD + DIWSLG    EL    PP        A  Q+      QL       +F
Sbjct: 180 EQLNHMSYDEKSDIWSLGCLIYELCALSPPF------TARNQL------QLASKIKEGKF 227

Query: 62  DCV------LLCDFVNECLRKDLEERPFAKELLRHPLL 93
             +       L + +   L  D ++RP  +ELL+ PL+
Sbjct: 228 RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 3/84 (3%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALF-QIPRNPPPQLTKRFDCVLLCDF 69
           +  Y+ + DIWSLG    EL     P    + +  L  +I +   P +  ++   L  + 
Sbjct: 177 NKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-LLELALKILKGQYPPIPSQYSSELR-NL 234

Query: 70  VNECLRKDLEERPFAKELLRHPLL 93
           V+  L+KD EERP   ++L+ P +
Sbjct: 235 VSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 49.5 bits (118), Expect = 3e-08
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPL-------SDLHPMRALFQIPRNPPPQ 56
           +A E+     Y    D+WSLGI+ +ELA G  P          L P++ L  I    PP 
Sbjct: 160 MAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV 219

Query: 57  LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
           L           F+ +C+RK  +ERP  + L+ HP +
Sbjct: 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI 256

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 44/132 (33%)

Query: 8   QQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ-----IP------RNPPPQ 56
           QQ    YDA+ DI+S+GITA ELA G  P  D+   + L +     +P        P  +
Sbjct: 181 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240

Query: 57  LTKRFDCVL----LCD-----------------------------FVNECLRKDLEERPF 83
           LT +         L +                             FV +CL+++ + RP 
Sbjct: 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPS 300

Query: 84  AKELLRHPLLKK 95
           A  LL H   K+
Sbjct: 301 ASTLLNHSFFKQ 312

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.3 bits (110), Expect = 3e-07
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)

Query: 1   MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKR 60
           +S   CE   D  Y+ + D+W+LG+   E   G  P    +    + +I R   P +++ 
Sbjct: 168 LSPELCE---DKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQM 224

Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
           +   L    +++CL KD  +RP   +LLR+P L
Sbjct: 225 YSQQL-AQLIDQCLTKDYRQRPDTFQLLRNPSL 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 45.9 bits (109), Expect = 5e-07
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 29/111 (26%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPL---SDL----HPMRA----------------LF 47
           D  Y    DIW++G    E+  G+P     SD+    H ++                 LF
Sbjct: 175 DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLF 234

Query: 48  QIPRNP----PPQLTKRFDCV--LLCDFVNECLRKDLEERPFAKELLRHPL 92
              R P       L KRF  +  L+ D   +CLR D ++RP + +LL H  
Sbjct: 235 AGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.4 bits (107), Expect = 7e-07
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP-PQLTKRFDCVLLC-DFVN 71
           Y  + D+WS+  T +E+    PP ++   M A+F+I   P  P L         C DF+ 
Sbjct: 186 YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDA--CRDFLK 243

Query: 72  ECLRKDLEERPFAKELLRHP 91
           +   ++ + RP A+ LLRHP
Sbjct: 244 QIFVEE-KRRPTAEFLLRHP 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 45.4 bits (107), Expect = 8e-07
 Identities = 39/138 (28%), Positives = 57/138 (41%), Gaps = 44/138 (31%)

Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELA----------------------EGDP---- 35
           S ++ E+     Y  + DIWS+G++ +E+A                      EGDP    
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESE 226

Query: 36  ----------PLS----DLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKD 77
                     PLS    D  P  A+F+    I   PPP+L          DFVN+CL K+
Sbjct: 227 TSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKN 286

Query: 78  LEERPFAKELLRHPLLKK 95
             ER   K+L+ H  +K+
Sbjct: 287 PAERADLKQLMVHAFIKR 304

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 45/136 (33%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--PQLTKRFDC-------- 63
           Y+ + DI+S+GITA ELA G  P  D+   + L Q  + PP  P     F C        
Sbjct: 187 YNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNS 246

Query: 64  -----------VL------------------------LCDFVNECLRKDLEERPFAKELL 88
                      V+                          + V  CL++D E+RP A  LL
Sbjct: 247 QSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLL 306

Query: 89  RHPLLKKGAQLAHQEL 104
            H   K+  +     +
Sbjct: 307 SHAFFKQVKEQTQGSI 322

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 5e-06
 Identities = 31/111 (27%), Positives = 45/111 (40%), Gaps = 30/111 (27%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDP--P--------------LSDLHP-MRALFQ----- 48
           D +Y    D+W++G    EL +G+P  P              L  L P  + LF      
Sbjct: 176 DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235

Query: 49  -----IPRNPPPQLTKRFDCVL---LCDFVNECLRKDLEERPFAKELLRHP 91
                   + P  L +R+   +     DF+  CLR D +ER    ELL+HP
Sbjct: 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 42.2 bits (100), Expect = 8e-06
 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 33/80 (41%)

Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVN 71
             Y  + DIWSLG+   EL E                                 L D + 
Sbjct: 169 GYYSEKSDIWSLGVILYELPE---------------------------------LKDLIR 195

Query: 72  ECLRKDLEERPFAKELLRHP 91
           + L+KD E+RP AKE+L H 
Sbjct: 196 KMLQKDPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 15/100 (15%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PPPQLTKR 60
           IA E  L   +    D WSLG    E   G PP     P   +FQ   N     P+    
Sbjct: 168 IAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-EIFQNILNGKIEWPE---- 222

Query: 61  FDCVL---LCDFVNECLRKDLEERPFAK---ELLRHPLLK 94
            D  +     D +++ L  D E+R  AK   E+  HP  K
Sbjct: 223 -DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFK 261

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLS--DLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVN 71
           Y  + DIWSLG    E+A   PP     +  +R   Q  + PP       D   L +F+ 
Sbjct: 178 YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQD---LQNFIR 234

Query: 72  ECLRKDLEERPFAKELLRHPLL 93
             L+   + RP   ++L  P +
Sbjct: 235 SMLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 13/85 (15%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ-IPRNP---PPQLTKRFDCVLLCDF 69
           Y    D WSLG+   E+  G PP       + +++ I ++P   P  L+         D 
Sbjct: 170 YGKAVDWWSLGVLLYEMLTGKPPFYA-EDRKEIYEKILKDPLRFPEFLSPE-----ARDL 223

Query: 70  VNECLRKDLEER---PFAKELLRHP 91
           ++  L+KD  +R     A+E+  HP
Sbjct: 224 ISGLLQKDPTKRLGSGGAEEIKAHP 248

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.0 bits (92), Expect = 1e-04
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 16/88 (18%)

Query: 11  DMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQI---PRNPPPQLTKRFDCVLL 66
           D  + ++ D+WS G+   E+   G+ P   +     L  +    R P P+     +C   
Sbjct: 178 DGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPE-----NC--- 229

Query: 67  CDFVNE----CLRKDLEERPFAKELLRH 90
            D + E    C   D E+RP   EL+  
Sbjct: 230 PDELYELMLQCWAYDPEDRPTFSELVED 257

Length = 258

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 12/82 (14%)

Query: 19  DIWSLGITAIELAEGDPPLS-----DLHP-MRAL-FQIPRNPPPQLTKRFDCVLLCDFVN 71
           DIWSLG++ +E   G  P       D    M A+    P   P   ++ F       F++
Sbjct: 255 DIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFR-----HFIS 309

Query: 72  ECLRKDLEERPFAKELLRHPLL 93
            CL+++  +R  A +LL+HP +
Sbjct: 310 CCLQREPAKRWSAMQLLQHPFI 331

Length = 353

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 38.1 bits (88), Expect = 3e-04
 Identities = 34/140 (24%), Positives = 52/140 (37%), Gaps = 46/140 (32%)

Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLS----------------------- 38
           S ++ E+     Y  + DIWS+G++ +ELA G  P+                        
Sbjct: 167 SYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEP 226

Query: 39  -------------------DLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLR 75
                              D  P  A+F+    I   PPP+L          +FVN+CL 
Sbjct: 227 HSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLI 286

Query: 76  KDLEERPFAKELLRHPLLKK 95
           K+  ER   K L+ H  +K+
Sbjct: 287 KNPAERADLKMLMNHTFIKR 306

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 28/103 (27%), Positives = 36/103 (34%), Gaps = 20/103 (19%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM---------RALFQIPRNPP 54
           IA E      Y   CD WSLG+   E+  G PP                +   + P +PP
Sbjct: 197 IAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPP 256

Query: 55  -PQLTKRFDCVLLCDFVNECLRKDLEER-PFAKELLRHPLLKK 95
                    C LLC         D E+R    +E+  HP  K 
Sbjct: 257 VSPEAIDLICRLLC---------DPEDRLGSFEEIKSHPFFKG 290

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 36.0 bits (84), Expect = 0.001
 Identities = 27/107 (25%), Positives = 38/107 (35%), Gaps = 28/107 (26%)

Query: 13  SYDARCDIWSLGITAIELAEGDP--------------------PLSDLHP-----MRAL- 46
           SY +  DIW+LG    EL    P                    P     P        L 
Sbjct: 175 SYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG 234

Query: 47  FQIPRNPPPQLTKRFDCVL--LCDFVNECLRKDLEERPFAKELLRHP 91
           F+ P+  P  L +          D + + LR D ++RP A + L+HP
Sbjct: 235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHP 281

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 35.7 bits (82), Expect = 0.002
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD++ DIWSLG    E+          + +  + +I   P P L + +    L   +   
Sbjct: 182 YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQ-LNSIMQSM 240

Query: 74  LRKDLEERPFAKELLRHPLL 93
           L KD   RP A E+LR+P +
Sbjct: 241 LNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 35.3 bits (82), Expect = 0.002
 Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 12/85 (14%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLS--DLHPMRALFQIPR-----NPPPQ 56
           +A E  L+  YD   D WSLGI   EL  G PP    D  PM     I +       P  
Sbjct: 159 VAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNY 218

Query: 57  LTKRFDCVLLCDFVNECLRKDLEER 81
           + K        D + + LR++ EER
Sbjct: 219 IDKAA-----KDLIKQLLRRNPEER 238

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 10/83 (12%)

Query: 5   ACEQQLDMSYDARCDIWSLGITAIEL-AEGDPPLSDLHPMRALFQIPRN---PPPQLTKR 60
           A E  L   +  + D+WS GI   EL  +G  P   ++    L Q+ R    P PQ    
Sbjct: 171 APEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQ---- 226

Query: 61  FDC-VLLCDFVNECLRKDLEERP 82
            DC + L + + +C +KD EERP
Sbjct: 227 -DCPISLHELMLQCWKKDPEERP 248

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 34.8 bits (80), Expect = 0.004
 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCVLLCD 68
           +D   D WSLG+   EL  G  P +      +  +I R      PP    K        D
Sbjct: 185 HDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP--FPKTMS-AEARD 241

Query: 69  FVNECLRKDLEER---PFAKELLRHPLLKK 95
           F+ + L KD ++R     A E+  HP  + 
Sbjct: 242 FIQKLLEKDPKKRLGANGADEIKNHPFFQG 271

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	108
KOG0581|consensus	364		99.93
KOG0610|consensus	459		99.92
KOG0033|consensus	355		99.92
KOG0201|consensus	467		99.92
KOG0575|consensus	592		99.91
KOG0588|consensus	786		99.91
KOG0578|consensus	550		99.91
KOG0605|consensus	550		99.89
KOG0598|consensus	357		99.89
KOG0694|consensus	694		99.88
KOG0592|consensus	604		99.88
KOG0582|consensus	516		99.88
KOG0615|consensus	475		99.88
KOG0583|consensus	370		99.87
PTZ00284	467	protein kinase; Provisional	99.87
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.87
KOG4721|consensus	904		99.87
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.86
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.86
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.86
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.86
KOG0198|consensus	313		99.86
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.86
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.86
KOG0616|consensus	355		99.86
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.86
KOG0032|consensus	382		99.85
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.85
KOG0597|consensus	808		99.85
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.85
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.85
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.85
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.85
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.85
PTZ00036	440	glycogen synthase kinase; Provisional	99.85
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.85
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.85
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.85
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.84
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.84
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.84
KOG4717|consensus	864		99.84
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.84
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.84
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.84
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.84
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.84
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.84
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.84
KOG0591|consensus	375		99.84
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.84
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.84
PHA02988	283	hypothetical protein; Provisional	99.84
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.84
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.84
PTZ00283	496	serine/threonine protein kinase; Provisional	99.84
KOG0983|consensus	391		99.84
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.84
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.84
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.84
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.84
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.84
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.84
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.83
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.83
KOG0603|consensus	612		99.83
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.83
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.83
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.83
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.83
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.83
KOG0596|consensus	677		99.83
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.83
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.83
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.83
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.83
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.83
KOG0585|consensus	576		99.83
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.83
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.83
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.83
KOG0192|consensus	362		99.83
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.83
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.82
PTZ00267	478	NIMA-related protein kinase; Provisional	99.82
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.82
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.82
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.82
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.82
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.82
KOG0579|consensus	1187		99.82
KOG0599|consensus	411		99.82
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.82
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.82
KOG0197|consensus	468		99.82
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.82
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.82
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.82
KOG0667|consensus	586		99.82
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.82
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.82
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.82
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.82
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.82
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.82
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.82
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.82
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.82
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.81
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.81
KOG1026|consensus	774		99.81
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.81
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.81
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.81
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.81
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.81
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.81
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.81
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.81
KOG0671|consensus	415		99.81
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.81
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.81
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.81
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.81
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.81
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.81
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.81
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.8
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.8
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.8
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.8
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.8
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.8
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.8
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.8
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.8
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.8
KOG0604|consensus	400		99.8
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.8
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.8
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.8
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.8
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.8
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.8
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.8
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.8
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.8
PHA03212	391	serine/threonine kinase US3; Provisional	99.8
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.8
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.8
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.8
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.8
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.8
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.8
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.8
KOG0580|consensus	281		99.8
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.79
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.79
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.79
KOG0574|consensus	502		99.79
PHA03207	392	serine/threonine kinase US3; Provisional	99.79
KOG0593|consensus	396		99.79
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.79
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.79
KOG0589|consensus	426		99.79
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.79
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.79
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.79
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.79
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.79
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.79
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.79
KOG0660|consensus	359		99.79
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.79
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.79
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.79
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.79
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.79
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.79
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.79
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.79
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.79
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.79
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.79
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.79
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.79
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.79
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.78
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.78
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.78
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.78
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.78
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.78
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.78
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.78
KOG4279|consensus	1226		99.78
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.78
PLN00009	294	cyclin-dependent kinase A; Provisional	99.78
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.78
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.78
KOG0614|consensus	732		99.78
KOG0696|consensus	683		99.77
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.77
KOG1095|consensus	1025		99.77
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.77
KOG0661|consensus	538		99.77
KOG0690|consensus	516		99.77
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.77
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.77
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.77
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.77
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.77
PHA03209	357	serine/threonine kinase US3; Provisional	99.77
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.77
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.77
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.77
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.77
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.77
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.76
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.76
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.76
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.76
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.76
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.76
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.76
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.76
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.76
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.76
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.76
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.76
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.76
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.76
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.76
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.76
PHA03211	461	serine/threonine kinase US3; Provisional	99.76
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.76
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.76
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.76
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.75
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.75
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.75
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.75
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.75
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.75
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.75
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.75
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.75
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.75
KOG0986|consensus	591		99.75
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.75
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.75
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.74
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.74
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.74
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.74
KOG0577|consensus	948		99.74
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.74
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.74
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.74
KOG0584|consensus	632		99.74
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.74
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.74
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.74
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.73
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.73
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.73
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.73
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.73
KOG0663|consensus	419		99.73
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.73
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.73
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.73
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.73
KOG0658|consensus	364		99.73
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.73
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.73
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.73
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.73
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.73
PHA03210	501	serine/threonine kinase US3; Provisional	99.73
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.73
KOG0659|consensus	318		99.73
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.73
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.73
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.73
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.73
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.73
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.73
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.73
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.73
PLN00181	793	protein SPA1-RELATED; Provisional	99.73
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.73
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.73
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.72
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.72
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.72
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.72
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.72
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.72
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.72
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.72
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.72
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.72
KOG4257|consensus	974		99.72
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.72
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.72
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.72
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.71
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.71
KOG0199|consensus	1039		99.71
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.71
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.71
KOG0200|consensus	609		99.71
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.71
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.71
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.71
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.71
KOG2345|consensus	302		99.71
KOG1024|consensus	563		99.71
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.71
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.71
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.7
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.7
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.7
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.7
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.7
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.7
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.7
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.7
KOG4645|consensus	1509		99.7
KOG1006|consensus	361		99.69
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.69
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.69
KOG0595|consensus	429		99.69
KOG0193|consensus	678		99.69
KOG1989|consensus	738		99.69
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.69
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.69
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.69
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.69
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.69
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.69
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.68
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.68
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.67
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.67
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.67
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.67
KOG0670|consensus	752		99.67
KOG0607|consensus	463		99.67
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.67
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.67
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.66
PHA02882	294	putative serine/threonine kinase; Provisional	99.66
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.66
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.66
KOG1290|consensus	590		99.66
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.65
KOG0594|consensus	323		99.65
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.65
KOG0665|consensus	369		99.64
KOG0695|consensus	593		99.64
KOG0600|consensus	560		99.64
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.63
KOG0587|consensus	953		99.63
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.63
KOG0611|consensus	668		99.62
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.62
KOG0612|consensus	1317		99.62
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.6
KOG4278|consensus	1157		99.6
KOG1027|consensus	903		99.6
KOG0194|consensus	474		99.6
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.6
KOG0196|consensus	996		99.59
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.58
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.58
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.58
KOG0586|consensus	596		99.57
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.57
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.57
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.57
KOG0669|consensus	376		99.53
KOG0195|consensus	448		99.53
KOG1035|consensus	1351		99.52
KOG0608|consensus	1034		99.51
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.51
KOG0666|consensus	438		99.5
KOG4236|consensus	888		99.47
KOG1094|consensus	807		99.43
KOG1025|consensus	1177		99.41
KOG1151|consensus	775		99.39
KOG0668|consensus	338		99.38
KOG0662|consensus	292		99.35
KOG0606|consensus	1205		99.33
KOG1167|consensus	418		99.32
KOG0664|consensus	449		99.29
KOG1187|consensus	361		99.28
KOG0590|consensus	601		99.26
KOG0576|consensus	829		99.22
KOG1033|consensus	516		99.14
KOG0984|consensus	282		99.11
KOG0603|consensus	612		99.11
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.06
KOG0606|consensus	1205		98.86
KOG1023|consensus	484		98.78
KOG1240|consensus	1431		98.74
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.64
KOG2052|consensus	513		98.58
KOG4158|consensus	598		98.56
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.49
KOG3653|consensus	534		98.44
KOG4250|consensus	732		98.41
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.41
KOG2137|consensus	700		98.25
KOG0590|consensus	601		98.14
KOG1266|consensus	458		97.92
KOG1345|consensus	378		97.86
KOG1152|consensus	772		97.76
KOG0601|consensus	524		96.47
KOG1164|consensus	322		96.41
COG4248	637	Uncharacterized protein with protein kinase and he	94.81
KOG1093|consensus	725		94.71
KOG1035|consensus	1351		91.9
KOG0576|consensus	829		89.12

>KOG0581|consensus

Probab=99.93  E-value=2e-26  Score=137.38  Aligned_cols=100  Identities=38%  Similarity=0.567  Sum_probs=88.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL-----HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      .|||||.+.+..|+.++||||+|..+.|++.|+.|+...     +..+.+..|..++++..+....++++++|+..||++
T Consensus       242 ~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~K  321 (364)
T KOG0581|consen  242 AYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRK  321 (364)
T ss_pred             cccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcC
Confidence            599999999999999999999999999999999988764     556778888888877777655799999999999999


Q ss_pred             CCCCCCCHHHHhcCcccccccccch
Q psy2811          77 DLEERPFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~~~~~~~  101 (108)
                      ||..|+++.|+++|||++.......
T Consensus       322 dp~~R~s~~qLl~Hpfi~~~~~~~v  346 (364)
T KOG0581|consen  322 DPSERPSAKQLLQHPFIKKFEDPNV  346 (364)
T ss_pred             CcccCCCHHHHhcCHHHhhcccccc
Confidence            9999999999999999987755443

>KOG0610|consensus

Probab=99.92  E-value=3.2e-25  Score=134.18  Aligned_cols=96  Identities=23%  Similarity=0.250  Sum_probs=88.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      +|+|||++.|.+++.++|+|.||+.+|+|+.|..||.+.+..+++.++...+...+.....+..+++||+++|.+||++|
T Consensus       300 EYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kR  379 (459)
T KOG0610|consen  300 EYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKR  379 (459)
T ss_pred             ccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhh
Confidence            59999999999999999999999999999999999999999999999988887776655667889999999999999999


Q ss_pred             CC----HHHHhcCccccccc
Q psy2811          82 PF----AKELLRHPLLKKGA   97 (108)
Q Consensus        82 ~~----~~~~l~~~~~~~~~   97 (108)
                      ..    +.||.+||||++.+
T Consensus       380 lg~~rGA~eIK~HpFF~gVn  399 (459)
T KOG0610|consen  380 LGSKRGAAEIKRHPFFEGVN  399 (459)
T ss_pred             hccccchHHhhcCccccCCC
Confidence            97    99999999999863

>KOG0033|consensus

Probab=99.92  E-value=8.2e-25  Score=125.78  Aligned_cols=97  Identities=22%  Similarity=0.229  Sum_probs=86.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      |+||+||++...+|+..+|||+.|+++|.++.|.+||.+.+....+.+|..+.....++  ...+.+.++++++||..||
T Consensus       176 P~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP  255 (355)
T KOG0033|consen  176 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNP  255 (355)
T ss_pred             CcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccCh
Confidence            68999999999999999999999999999999999999988888888887776554432  2458899999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      ++|.|+.|.|+|||+.+..
T Consensus       256 ~kRIta~EAL~HpWi~~r~  274 (355)
T KOG0033|consen  256 KKRITADEALKHPWICNRE  274 (355)
T ss_pred             hhhccHHHHhCCchhcchH
Confidence            9999999999999998653

>KOG0201|consensus

Probab=99.92  E-value=3e-25  Score=134.89  Aligned_cols=96  Identities=50%  Similarity=0.793  Sum_probs=86.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |-|||||++.+..|+.++||||+|++.++|++|.+|+....++..+..|....++.... ..++.+++|+..||.++|+.
T Consensus       175 PfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~-~~S~~~kEFV~~CL~k~P~~  253 (467)
T KOG0201|consen  175 PFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDG-DFSPPFKEFVEACLDKNPEF  253 (467)
T ss_pred             ccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCcccc-ccCHHHHHHHHHHhhcCccc
Confidence            45999999999999999999999999999999999999988877777777777776665 56888999999999999999


Q ss_pred             CCCHHHHhcCccccccc
Q psy2811          81 RPFAKELLRHPLLKKGA   97 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~   97 (108)
                      ||++.++++|.|++...
T Consensus       254 RpsA~~LLKh~FIk~a~  270 (467)
T KOG0201|consen  254 RPSAKELLKHKFIKRAK  270 (467)
T ss_pred             CcCHHHHhhhHHHHhcC
Confidence            99999999999999854

>KOG0575|consensus

Probab=99.91  E-value=9.8e-25  Score=136.72  Aligned_cols=94  Identities=29%  Similarity=0.363  Sum_probs=85.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |+|+|||++...+++.-+||||+||++|.++.|++||+..+..+++.+|.......+.  ..+.++++||..+|..+|..
T Consensus       182 PNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~  259 (592)
T KOG0575|consen  182 PNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSE  259 (592)
T ss_pred             CcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc--ccCHHHHHHHHHHhcCCccc
Confidence            7899999999999999999999999999999999999999999999888777665544  66888999999999999999


Q ss_pred             CCCHHHHhcCcccccc
Q psy2811          81 RPFAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~   96 (108)
                      ||++++|+.|+||+..
T Consensus       260 Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  260 RPSLDEVLDHPFFKSG  275 (592)
T ss_pred             CCCHHHHhcCHhhhCC
Confidence            9999999999999443

>KOG0588|consensus

Probab=99.91  E-value=1.7e-24  Score=137.26  Aligned_cols=100  Identities=24%  Similarity=0.296  Sum_probs=90.3

Q ss_pred             CccccccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDA-RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~-~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |+|.+||++.|..|+. ++||||.|+++|.+++|..||...+....+.++.++....+.  ..+.++.+|+++|+..||+
T Consensus       175 PHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs--~Is~eaQdLLr~ml~VDp~  252 (786)
T KOG0588|consen  175 PHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS--NISSEAQDLLRRMLDVDPS  252 (786)
T ss_pred             cccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC--cCCHHHHHHHHHHhccCcc
Confidence            6899999999999966 799999999999999999999999988889999888776553  6788999999999999999


Q ss_pred             CCCCHHHHhcCcccccccccchh
Q psy2811          80 ERPFAKELLRHPLLKKGAQLAHQ  102 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~~~~~  102 (108)
                      .|.+.+||++|||+.+......+
T Consensus       253 ~RiT~~eI~kHP~l~g~~~~~~~  275 (786)
T KOG0588|consen  253 TRITTEEILKHPFLSGYTSLPSS  275 (786)
T ss_pred             ccccHHHHhhCchhhcCCCCChh
Confidence            99999999999999887665554

>KOG0578|consensus

Probab=99.91  E-value=1.8e-24  Score=134.64  Aligned_cols=98  Identities=43%  Similarity=0.672  Sum_probs=85.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |.|||||++....|+.++||||+|+++.+|+.|++||...+....+..|.....+.. .+...+..+++|+.+||..|+.
T Consensus       433 PYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~  512 (550)
T KOG0578|consen  433 PYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVE  512 (550)
T ss_pred             CCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchh
Confidence            679999999999999999999999999999999999998888777777765554433 3345589999999999999999


Q ss_pred             CCCCHHHHhcCcccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~   98 (108)
                      +|+++.+||+||||+.+..
T Consensus       513 ~RasA~eLL~HpFl~~a~p  531 (550)
T KOG0578|consen  513 QRASAKELLEHPFLKMAKP  531 (550)
T ss_pred             cCCCHHHHhcChhhhhcCC
Confidence            9999999999999966544

>KOG0605|consensus

Probab=99.89  E-value=2.4e-23  Score=129.14  Aligned_cols=95  Identities=28%  Similarity=0.321  Sum_probs=82.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      |.|+|||++.+.+|+..+|+||+||++|+|+.|.+||.+.++.++..+|....  ...+.....+.++.+||.+|+. ||
T Consensus       352 PDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~  430 (550)
T KOG0605|consen  352 PDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DP  430 (550)
T ss_pred             ccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CH
Confidence            68999999999999999999999999999999999999999988888776654  2233333457899999999999 99


Q ss_pred             CCCCC---HHHHhcCcccccc
Q psy2811          79 EERPF---AKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~---~~~~l~~~~~~~~   96 (108)
                      .+|..   +.||.+||||++.
T Consensus       431 ~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  431 ENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             HHhcCcccHHHHhcCCccccC
Confidence            99984   9999999999876

>KOG0598|consensus

Probab=99.89  E-value=3.1e-23  Score=123.80  Aligned_cols=95  Identities=28%  Similarity=0.390  Sum_probs=84.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      ++|||||++.+..|+..+|+||+|+++|+|++|.+||.+.+......+|..+.....+ ...+.+.+++++++|..+|++
T Consensus       189 ~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p-~~ls~~ardll~~LL~rdp~~  267 (357)
T KOG0598|consen  189 PEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP-GYLSEEARDLLKKLLKRDPRQ  267 (357)
T ss_pred             ccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC-ccCCHHHHHHHHHHhccCHHH
Confidence            5799999999999999999999999999999999999999988888888887744433 246889999999999999999


Q ss_pred             CC----CHHHHhcCcccccc
Q psy2811          81 RP----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~----~~~~~l~~~~~~~~   96 (108)
                      |.    ++.++.+||||.+.
T Consensus       268 RLg~~~d~~~ik~HpfF~~i  287 (357)
T KOG0598|consen  268 RLGGPGDAEEIKRHPFFKGI  287 (357)
T ss_pred             hcCCCCChHHhhcCcccccC
Confidence            96    68999999999865

>KOG0694|consensus

Probab=99.88  E-value=8.6e-23  Score=129.64  Aligned_cols=94  Identities=22%  Similarity=0.311  Sum_probs=86.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |.|||||++.+..|+.++|+|++|+++|+|+.|+.||.+.+..+.+..|....+..+.  ..+.+..++++++|..+|++
T Consensus       532 pey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~--~ls~ea~~il~~ll~k~p~k  609 (694)
T KOG0694|consen  532 PEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR--FLSKEAIAIMRRLLRKNPEK  609 (694)
T ss_pred             hhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC--cccHHHHHHHHHHhccCccc
Confidence            6799999999999999999999999999999999999999999999999887766544  67899999999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |+.     +++|.+||||+..
T Consensus       610 RLG~~e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  610 RLGSGERDAEDIKKHPFFRSI  630 (694)
T ss_pred             ccCCCCCCchhhhhCCccccC
Confidence            985     5889999999865

>KOG0592|consensus

Probab=99.88  E-value=9.9e-23  Score=126.87  Aligned_cols=93  Identities=17%  Similarity=0.224  Sum_probs=85.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||++.+...+..+|+|+|||++|+|+.|.+||.+.+...++.+|.......+.  ..+..+++|++++|..||..|
T Consensus       252 eYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~--~fp~~a~dLv~KLLv~dp~~R  329 (604)
T KOG0592|consen  252 EYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE--GFPEDARDLIKKLLVRDPSDR  329 (604)
T ss_pred             cccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC--CCCHHHHHHHHHHHccCcccc
Confidence            599999999999999999999999999999999999999999999998877666554  456889999999999999999


Q ss_pred             CCHHHHhcCcccccc
Q psy2811          82 PFAKELLRHPLLKKG   96 (108)
Q Consensus        82 ~~~~~~l~~~~~~~~   96 (108)
                      +++.+|.+||||.+.
T Consensus       330 lt~~qIk~HpFF~~V  344 (604)
T KOG0592|consen  330 LTSQQIKAHPFFEGV  344 (604)
T ss_pred             ccHHHHhhCcccccC
Confidence            999999999999876

>KOG0582|consensus

Probab=99.88  E-value=1.6e-22  Score=123.66  Aligned_cols=99  Identities=37%  Similarity=0.574  Sum_probs=80.2

Q ss_pred             Cccccccccc--cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCc--------CCcHHHHHHH
Q psy2811           1 MSVIACEQQL--DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKR--------FDCVLLCDFV   70 (108)
Q Consensus         1 ~~y~ape~~~--~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~   70 (108)
                      |.|||||++.  ..+|+.|+||||||+...++.+|..||....++..+....++.++.+...        ..+..++.++
T Consensus       194 p~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i  273 (516)
T KOG0582|consen  194 PCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMI  273 (516)
T ss_pred             ccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHH
Confidence            5799999954  37789999999999999999999999999887776655555544422211        1256788999


Q ss_pred             HHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          71 NECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        71 ~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      ..||..||++||+++++++|+||+..+..
T Consensus       274 ~~CL~kDP~kRptAskLlkh~FFk~~k~~  302 (516)
T KOG0582|consen  274 ALCLVKDPSKRPTASKLLKHAFFKKAKSK  302 (516)
T ss_pred             HHHhhcCcccCCCHHHHhccHHHhhccch
Confidence            99999999999999999999999877554

>KOG0615|consensus

Probab=99.88  E-value=9.4e-24  Score=127.93  Aligned_cols=98  Identities=29%  Similarity=0.264  Sum_probs=78.7

Q ss_pred             CccccccccccCCCC---cchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHhhccCCCCCCCCC--cCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYD---ARCDIWSLGITAIELAEGDPPLSDLHPMR-ALFQIPRNPPPQLTK--RFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~---~~~dv~s~g~~l~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l   74 (108)
                      |.|.|||++.+.+++   .++|+||+||++|-+++|.+||++..... ...+|..+.....+.  ...+.+..+||.+||
T Consensus       342 psYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL  421 (475)
T KOG0615|consen  342 PSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWML  421 (475)
T ss_pred             ccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhh
Confidence            689999999876643   37899999999999999999998764332 555666666554332  234788899999999


Q ss_pred             hcCCCCCCCHHHHhcCcccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      ..||++|+++.++|+||||+....
T Consensus       422 ~VdP~~R~s~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  422 VVDPENRPSADEALNHPWFKDAPC  445 (475)
T ss_pred             EeCcccCcCHHHHhcChhhhcccc
Confidence            999999999999999999996653

>KOG0583|consensus

Probab=99.87  E-value=4.5e-22  Score=122.19  Aligned_cols=94  Identities=22%  Similarity=0.260  Sum_probs=82.7

Q ss_pred             CccccccccccCC-CCc-chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMS-YDA-RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~-~~~-~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      |.|+|||++.+.. |+. ++||||+|+++|.|++|..||...+......++..+....+.... +.+++.++.+||..+|
T Consensus       185 p~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P  263 (370)
T KOG0583|consen  185 PAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDP  263 (370)
T ss_pred             cccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCc
Confidence            5799999999988 875 799999999999999999999998887777777777665544222 8899999999999999


Q ss_pred             CCCCCHHHHhcCccccc
Q psy2811          79 EERPFAKELLRHPLLKK   95 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~   95 (108)
                      .+|+++.+++.|+||+.
T Consensus       264 ~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  264 STRITLLEILEHPWFQK  280 (370)
T ss_pred             ccCCCHHHHhhChhhcc
Confidence            99999999999999997

>PTZ00284 protein kinase; Provisional

Probab=99.87  E-value=2.9e-22  Score=126.50  Aligned_cols=96  Identities=23%  Similarity=0.332  Sum_probs=72.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC--CC------------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN--PP------------------------   54 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~--~~------------------------   54 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++|+.||.+.+..+.+..+...  ..                        
T Consensus       309 ~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  388 (467)
T PTZ00284        309 RHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLR  388 (467)
T ss_pred             ccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccc
Confidence            3699999999999999999999999999999999999876654332211100  00                        


Q ss_pred             CC--------------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          55 PQ--------------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        55 ~~--------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      +.              .........+.+|+.+||+.||.+|+++.|+++||||...
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        389 PCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             ccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence            00              0000113456799999999999999999999999999864

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.87  E-value=2.1e-22  Score=112.76  Aligned_cols=96  Identities=23%  Similarity=0.238  Sum_probs=70.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHhhccCCCCCCC-----CCcCCcH--HHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIPRNPPPQL-----TKRFDCV--LLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~--~~~~l~~~   72 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|..||...... .....+........     .......  .+.+++.+
T Consensus        68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  147 (176)
T smart00750       68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRV  147 (176)
T ss_pred             ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHH
Confidence            4699999999999999999999999999999999999765332 12222211111110     0001122  68899999


Q ss_pred             HhhcCCCCCCCHHHHhcCcccccc
Q psy2811          73 CLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        73 ~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ||..+|.+||++.+++.|+|+...
T Consensus       148 cl~~~p~~Rp~~~~ll~~~~~~~~  171 (176)
T smart00750      148 CASRLPQRREAANHYLAHCRALFA  171 (176)
T ss_pred             HHhcccccccCHHHHHHHHHHHHH
Confidence            999999999999999999998654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4721|consensus

Probab=99.87  E-value=1.9e-22  Score=127.15  Aligned_cols=100  Identities=18%  Similarity=0.264  Sum_probs=83.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|||||++..+..+.|+||||||++||+|+||..||...+...++.-+.......+-+...+..++-|++.||+..|.+|
T Consensus       276 aWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNR  355 (904)
T KOG4721|consen  276 AWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNR  355 (904)
T ss_pred             hhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCC
Confidence            69999999999999999999999999999999999998887766665555555555555778899999999999999999


Q ss_pred             CCHHHHhcCcccccccccch
Q psy2811          82 PFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        82 ~~~~~~l~~~~~~~~~~~~~  101 (108)
                      |+|++++.|--+........
T Consensus       356 PSFrqil~HldIa~pell~~  375 (904)
T KOG4721|consen  356 PSFRQILLHLDIASPELLST  375 (904)
T ss_pred             ccHHHHHHHHhhcCHHHhcc
Confidence            99999999865554444333

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.86  E-value=5.4e-22  Score=118.27  Aligned_cols=93  Identities=24%  Similarity=0.380  Sum_probs=70.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---------------------CCCCCC-
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---------------------PPPQLT-   58 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~-   58 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+..+....+...                     ..+... 
T Consensus       165 ~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (287)
T cd07848         165 RWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNH  244 (287)
T ss_pred             cccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccC
Confidence            3599999998888999999999999999999999999876543322211100                     000000 


Q ss_pred             --------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 --------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 --------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                              ....+..+.+++++||+.||++|+++.++++||||
T Consensus       245 ~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         245 PQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                    00135678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.86  E-value=1.8e-21  Score=118.35  Aligned_cols=99  Identities=29%  Similarity=0.465  Sum_probs=74.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhcc------------------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIP------------------------------   50 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~------------------------------   50 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+..+....+.                              
T Consensus       166 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (331)
T cd06649         166 RSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGM  245 (331)
T ss_pred             cCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccccccccc
Confidence            36999999998889999999999999999999999997654332211110                              


Q ss_pred             ----------------CCCCCCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          51 ----------------RNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        51 ----------------~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                                      ....+.......+.++.+|+.+||..||++||++.++++|+||+.....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~~  310 (331)
T cd06649         246 DSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEVE  310 (331)
T ss_pred             ccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcccc
Confidence                            0001111111245778999999999999999999999999999876443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=2e-21  Score=115.22  Aligned_cols=98  Identities=55%  Similarity=0.851  Sum_probs=79.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...+.......+.....+.......+..+.+++.+||..+|++|
T Consensus       163 ~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~R  242 (274)
T cd06609         163 FWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKER  242 (274)
T ss_pred             cccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhC
Confidence            58999999888889999999999999999999999987665554444444433332221246778899999999999999


Q ss_pred             CCHHHHhcCccccccccc
Q psy2811          82 PFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        82 ~~~~~~l~~~~~~~~~~~   99 (108)
                      |+++++++|+||+.....
T Consensus       243 pt~~~il~~~~~~~~~~~  260 (274)
T cd06609         243 PSAKELLKHKFIKKAKKT  260 (274)
T ss_pred             cCHHHHhhChhhcCCCcc
Confidence            999999999999887655

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=1.3e-21  Score=117.03  Aligned_cols=94  Identities=22%  Similarity=0.216  Sum_probs=78.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+.......+.........  ..+..+++++++||..||.+
T Consensus       162 ~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~li~~~l~~dp~~  239 (291)
T cd05612         162 PEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR--HLDLYAKDLIKKLLVVDRTR  239 (291)
T ss_pred             hhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc--cCCHHHHHHHHHHcCCCHHH
Confidence            3699999999888999999999999999999999999888776666665554433322  34678899999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     +.++++|+||+..
T Consensus       240 R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         240 RLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             ccCCccCCHHHHhcCccccCC
Confidence            995     9999999999754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0198|consensus

Probab=99.86  E-value=1.8e-22  Score=120.75  Aligned_cols=98  Identities=34%  Similarity=0.504  Sum_probs=76.5

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCC-CCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSD-LHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      |.|||||++.+. ..+.++||||+||++.+|+||.+||.. ........++......+..+...+.+.++|+.+|+..+|
T Consensus       185 p~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p  264 (313)
T KOG0198|consen  185 PNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDP  264 (313)
T ss_pred             ccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCc
Confidence            569999999863 223489999999999999999999987 444444445444432223333568899999999999999


Q ss_pred             CCCCCHHHHhcCcccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .+|||+.+++.|||.+....
T Consensus       265 ~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  265 EKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             ccCcCHHHHhhChhhhcccc
Confidence            99999999999999977554

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.86  E-value=7.8e-22  Score=119.84  Aligned_cols=94  Identities=21%  Similarity=0.247  Sum_probs=78.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.........+..+.....  ...+..+++++.+||..||.+
T Consensus       179 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~  256 (329)
T PTZ00263        179 PEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP--NWFDGRARDLVKGLLQTDHTK  256 (329)
T ss_pred             hhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC--CCCCHHHHHHHHHHhhcCHHH
Confidence            369999999998899999999999999999999999988777666666655543322  245678899999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     +.+++.||||++.
T Consensus       257 R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        257 RLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             cCCCCCCCHHHHhcCCccCCC
Confidence            996     7999999999864

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.86  E-value=6.2e-22  Score=119.98  Aligned_cols=94  Identities=22%  Similarity=0.224  Sum_probs=78.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||...+.......+.......+  ...+.++.+++.+||..||++
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~  236 (323)
T cd05571         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQ  236 (323)
T ss_pred             ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHccCCHHH
Confidence            469999999999999999999999999999999999988776655555544433222  245788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.++++|+||+..
T Consensus       237 R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         237 RLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             cCCCCCCCHHHHHcCCCcCCC
Confidence            99     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0616|consensus

Probab=99.86  E-value=1.1e-21  Score=115.06  Aligned_cols=94  Identities=23%  Similarity=0.335  Sum_probs=85.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |+|+|||++...+|+.++|+|++|+++|+|+.|.+||...+...+..+|..+....+.  ..+..+++|++++|+.|-.+
T Consensus       205 PeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~--~fs~~~kdLl~~LL~vD~t~  282 (355)
T KOG0616|consen  205 PEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS--YFSSDAKDLLKKLLQVDLTK  282 (355)
T ss_pred             ccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc--ccCHHHHHHHHHHHhhhhHh
Confidence            6899999999999999999999999999999999999999999999999988776655  56788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |.     ...+|..|+||++.
T Consensus       283 R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  283 RFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             hhcCcCCCccccccCcccccc
Confidence            95     47789999999865

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.86  E-value=1.6e-21  Score=118.10  Aligned_cols=94  Identities=21%  Similarity=0.278  Sum_probs=79.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+.......+........  ...+.++.+++++||..||.+
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~li~~~L~~dP~~  237 (320)
T cd05590         160 PDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP--TWLSQDAVDILKAFMTKNPTM  237 (320)
T ss_pred             ccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcccCHHH
Confidence            369999999988899999999999999999999999998877666666655443322  245778899999999999999


Q ss_pred             CCCH------HHHhcCcccccc
Q psy2811          81 RPFA------KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~------~~~l~~~~~~~~   96 (108)
                      |+++      +++++|+||+..
T Consensus       238 R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         238 RLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCCCCCCHHHHHcCCCcCCC
Confidence            9998      899999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0032|consensus

Probab=99.85  E-value=4.5e-21  Score=118.06  Aligned_cols=99  Identities=23%  Similarity=0.281  Sum_probs=85.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      |.|+|||++.+..|+..+|+||+|+++|.|+.|.+||.+.........+..+.......  ...+..++++++.++..||
T Consensus       202 p~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp  281 (382)
T KOG0032|consen  202 PEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDP  281 (382)
T ss_pred             ccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCc
Confidence            57999999999999999999999999999999999999988777777777765543322  2347889999999999999


Q ss_pred             CCCCCHHHHhcCccccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      ..|+++.++++|||++.....
T Consensus       282 ~~R~ta~~~L~HpWi~~~~~~  302 (382)
T KOG0032|consen  282 RKRLTAAQALQHPWIKSIGEA  302 (382)
T ss_pred             ccCCCHHHHhcCccccCCccc
Confidence            999999999999999876433

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.85  E-value=2.1e-21  Score=115.91  Aligned_cols=93  Identities=24%  Similarity=0.208  Sum_probs=71.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC----CCC-------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP----PQL-------------------   57 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~-------------------   57 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|.+||.+....+.+..+.....    ...                   
T Consensus       173 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (290)
T cd07862         173 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI  252 (290)
T ss_pred             ccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCH
Confidence            369999999888899999999999999999999999988765544433321100    000                   


Q ss_pred             --CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          58 --TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        58 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                        .....+..+.+++.+||+.||++||++.++++||||
T Consensus       253 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         253 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             HHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence              001235667899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0597|consensus

Probab=99.85  E-value=1.1e-21  Score=123.43  Aligned_cols=95  Identities=27%  Similarity=0.370  Sum_probs=84.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |-|||||.+.+..|+..+|.||+||++|++..|++||-.....+....|...+..++.  ..+..+.+|+.++|.+||.+
T Consensus       164 PlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~  241 (808)
T KOG0597|consen  164 PLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQ  241 (808)
T ss_pred             ccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhh
Confidence            5699999999999999999999999999999999999887777777777766655444  56889999999999999999


Q ss_pred             CCCHHHHhcCccccccc
Q psy2811          81 RPFAKELLRHPLLKKGA   97 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~   97 (108)
                      |.++.+++.|||.++.-
T Consensus       242 RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  242 RLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             cccHHHHhcChHHhhhh
Confidence            99999999999998653

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=5.8e-21  Score=112.45  Aligned_cols=92  Identities=26%  Similarity=0.473  Sum_probs=75.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|+|||.+.+..++.++|+||+|+++|++++|..||..........++.........+...+..+.+++++||..+|.+|
T Consensus       172 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  251 (263)
T cd06625         172 YWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKR  251 (263)
T ss_pred             cccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccC
Confidence            58999999988889999999999999999999999987665554444433332222223457788999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++|+||
T Consensus       252 pt~~~ll~~~~~  263 (263)
T cd06625         252 PSAEELLRHFFV  263 (263)
T ss_pred             CCHHHHhhCCCC
Confidence            999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.85  E-value=3e-21  Score=116.79  Aligned_cols=94  Identities=20%  Similarity=0.259  Sum_probs=78.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+.+.......+........  ...+..+.+++++||..||.+
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~li~~~l~~dP~~  237 (318)
T cd05570         160 PDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP--RWLSKEAKSILKSFLTKNPEK  237 (318)
T ss_pred             ccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--CcCCHHHHHHHHHHccCCHHH
Confidence            369999999999999999999999999999999999988776665555544433222  245778899999999999999


Q ss_pred             CCCH-----HHHhcCcccccc
Q psy2811          81 RPFA-----KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~-----~~~l~~~~~~~~   96 (108)
                      |+++     .+++.|+||+..
T Consensus       238 R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         238 RLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             cCCCCCCCHHHHhcCCCcCCC
Confidence            9999     999999999774

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2e-21  Score=117.25  Aligned_cols=94  Identities=24%  Similarity=0.258  Sum_probs=78.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||...+.......+.........  ..+..+.+++.+||..||.+
T Consensus       157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dp~~  234 (312)
T cd05585         157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPD--GFDRDAKDLLIGLLSRDPTR  234 (312)
T ss_pred             cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCC--cCCHHHHHHHHHHcCCCHHH
Confidence            3699999999988999999999999999999999999887776666665554433322  45678899999999999999


Q ss_pred             CC---CHHHHhcCcccccc
Q psy2811          81 RP---FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~---~~~~~l~~~~~~~~   96 (108)
                      |+   ++.+++.||||+..
T Consensus       235 R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         235 RLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             cCCCCCHHHHHcCCCcCCC
Confidence            97   57999999999865

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.85  E-value=4.4e-21  Score=116.30  Aligned_cols=94  Identities=20%  Similarity=0.295  Sum_probs=79.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|+++|++++|..||.+.+..+....+.......+.  ..+..+.+++.+||..||.+
T Consensus       165 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~  242 (324)
T cd05589         165 PEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR--FLSREAISIMRRLLRRNPER  242 (324)
T ss_pred             ccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHhH
Confidence            3699999999888999999999999999999999999988776666665554433222  45678889999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.++++|+||++.
T Consensus       243 R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         243 RLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             cCCCCCCCHHHHhhCCCcCCC
Confidence            99     69999999999764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.85  E-value=5.6e-21  Score=113.67  Aligned_cols=92  Identities=54%  Similarity=0.937  Sum_probs=71.3

Q ss_pred             ccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      .|+|||.+.     +..++.++|+||+|++++++++|..||...........+.............+..+.+++.+||..
T Consensus       186 ~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  265 (282)
T cd06636         186 YWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVK  265 (282)
T ss_pred             cccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCC
Confidence            589999875     345677899999999999999999999766554444333333222222223467899999999999


Q ss_pred             CCCCCCCHHHHhcCccc
Q psy2811          77 DLEERPFAKELLRHPLL   93 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~   93 (108)
                      +|.+||++.++++|+||
T Consensus       266 ~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         266 NYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ChhhCcCHHHHhcCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.85  E-value=1.8e-21  Score=122.23  Aligned_cols=97  Identities=24%  Similarity=0.287  Sum_probs=73.2

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C----------------CCCC---
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P----------------PPQL---   57 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~----------------~~~~---   57 (108)
                      +.|+|||++.+ ..++.++|+||+|+++|+|++|.+||.+....+.+.++...   +                .+..   
T Consensus       234 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  313 (440)
T PTZ00036        234 RFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPK  313 (440)
T ss_pred             cCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCch
Confidence            35999999876 46889999999999999999999999887654433332110   0                0000   


Q ss_pred             -----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          58 -----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        58 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                           .+...+.++.+|+.+||..+|.+|+++.++++||||+...
T Consensus       314 ~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        314 DLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             hHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence                 0112356788999999999999999999999999997643

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.85  E-value=4.8e-21  Score=115.89  Aligned_cols=94  Identities=22%  Similarity=0.326  Sum_probs=77.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+..+....+....+.. + ...+.++.+++.+||..+|++
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~li~~~l~~~P~~  237 (316)
T cd05619         160 PDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCY-P-RWLTREAKDILVKLFVREPER  237 (316)
T ss_pred             ccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-C-ccCCHHHHHHHHHHhccCHhh
Confidence            36999999998889999999999999999999999998877666555554433322 1 245678899999999999999


Q ss_pred             CCCHH-HHhcCcccccc
Q psy2811          81 RPFAK-ELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~-~~l~~~~~~~~   96 (108)
                      |+++. ++++||||+..
T Consensus       238 R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         238 RLGVKGDIRQHPFFREI  254 (316)
T ss_pred             cCCChHHHHcCcccCCC
Confidence            99986 89999999775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.85  E-value=8.5e-21  Score=112.28  Aligned_cols=92  Identities=49%  Similarity=0.889  Sum_probs=71.2

Q ss_pred             ccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      .|+|||++.     +..++.++|+||+|++++++++|..||...........+.............+..+.+++.+||..
T Consensus       176 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  255 (272)
T cd06637         176 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVK  255 (272)
T ss_pred             cccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCC
Confidence            589999986     345777999999999999999999999766544443333333222222223467899999999999


Q ss_pred             CCCCCCCHHHHhcCccc
Q psy2811          77 DLEERPFAKELLRHPLL   93 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~   93 (108)
                      +|.+||++.+++.||||
T Consensus       256 ~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         256 NHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             ChhhCCCHHHHhhCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.85  E-value=1.2e-20  Score=110.83  Aligned_cols=92  Identities=22%  Similarity=0.354  Sum_probs=75.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||...+.......+..+..+... ...+..+.+++.+|+..+|.+
T Consensus       166 ~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  244 (257)
T cd08223         166 PYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMP-KDYSPELGELIATMLSKRPEK  244 (257)
T ss_pred             cCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCc-cccCHHHHHHHHHHhccCccc
Confidence            3689999998888889999999999999999999999877655544444444332222 245678999999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      ||++.++++||||
T Consensus       245 Rp~~~~~l~~~~~  257 (257)
T cd08223         245 RPSVKSILRQPYI  257 (257)
T ss_pred             CCCHHHHhcCCCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.84  E-value=4.4e-21  Score=116.54  Aligned_cols=94  Identities=23%  Similarity=0.232  Sum_probs=78.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+.......+.......+  ...+.++.+++++||..||++
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~  236 (328)
T cd05593         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP--RTLSADAKSLLSGLLIKDPNK  236 (328)
T ss_pred             cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC--CCCCHHHHHHHHHHcCCCHHH
Confidence            469999999988899999999999999999999999988776655555544433222  245778899999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.++++|+||.+.
T Consensus       237 R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         237 RLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             cCCCCCCCHHHHhcCCCcCCC
Confidence            97     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.84  E-value=5.3e-21  Score=115.65  Aligned_cols=94  Identities=21%  Similarity=0.275  Sum_probs=77.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||...+.......+....+.. + ...+.++++++.+||..||++
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~li~~~l~~dP~~  237 (316)
T cd05620         160 PDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHY-P-RWITKESKDILEKLFERDPTR  237 (316)
T ss_pred             cCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-C-CCCCHHHHHHHHHHccCCHHH
Confidence            36999999999899999999999999999999999998877665555544333222 1 245778999999999999999


Q ss_pred             CCCH-HHHhcCcccccc
Q psy2811          81 RPFA-KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~-~~~l~~~~~~~~   96 (108)
                      |+++ +++++|+||+..
T Consensus       238 R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         238 RLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             cCCChHHHHcCCCcCCC
Confidence            9997 588899999775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.84  E-value=3.6e-21  Score=116.55  Aligned_cols=94  Identities=19%  Similarity=0.281  Sum_probs=79.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+.......+.......+  ...+.++.+++.+||..+|++
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~ll~~~L~~dp~~  237 (321)
T cd05591         160 PDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP--VWLSKEAVSILKAFMTKNPNK  237 (321)
T ss_pred             ccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhccCHHH
Confidence            369999999988899999999999999999999999998887776666655443322  245678899999999999999


Q ss_pred             CC-------CHHHHhcCcccccc
Q psy2811          81 RP-------FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-------~~~~~l~~~~~~~~   96 (108)
                      |+       ++.++++||||...
T Consensus       238 R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         238 RLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             cCCCCCCCCCHHHHhcCCccCCC
Confidence            99       89999999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG4717|consensus

Probab=99.84  E-value=4.5e-21  Score=120.09  Aligned_cols=96  Identities=27%  Similarity=0.366  Sum_probs=86.6

Q ss_pred             CccccccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDA-RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~-~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|-|||++.|..|+. ++||||+|+++|.+..|++||+..+..+++..|..+.+..+.  ..+.+++++|..||..||+
T Consensus       182 LAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs--hvS~eCrdLI~sMLvRdPk  259 (864)
T KOG4717|consen  182 LAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS--HVSKECRDLIQSMLVRDPK  259 (864)
T ss_pred             hhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch--hhhHHHHHHHHHHHhcCch
Confidence            3699999999999976 699999999999999999999999999999888888766544  6789999999999999999


Q ss_pred             CCCCHHHHhcCcccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~   98 (108)
                      +|.+.++|..++|++....
T Consensus       260 kRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  260 KRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             hhccHHHHhccccccCCCC
Confidence            9999999999999987654

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.84  E-value=1e-20  Score=115.10  Aligned_cols=96  Identities=31%  Similarity=0.539  Sum_probs=71.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh---------------------------------
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ---------------------------------   48 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~---------------------------------   48 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...........                                 
T Consensus       167 ~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (333)
T cd06650         167 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSR  246 (333)
T ss_pred             cccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhccccc
Confidence            69999999988889999999999999999999999875433221110                                 


Q ss_pred             -----------ccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          49 -----------IPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        49 -----------~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                                 +.....+.......+.++.+|+.+||+.||++||++.+++.|+||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         247 PPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             ccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence                       0011111111112356788999999999999999999999999998764

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.84  E-value=1.4e-20  Score=112.95  Aligned_cols=99  Identities=42%  Similarity=0.696  Sum_probs=78.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|+++|++++|..||...+.......+.....+. ......+..+.+++.+||..+|++
T Consensus       180 ~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  259 (296)
T cd06655         180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEK  259 (296)
T ss_pred             cccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhh
Confidence            5899999988888899999999999999999999998876654443332222211 122234678889999999999999


Q ss_pred             CCCHHHHhcCcccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~~  100 (108)
                      ||++.+++.|+||+......
T Consensus       260 Rpt~~~il~~~~~~~~~~~~  279 (296)
T cd06655         260 RGSAKELLQHPFLKLAKPLS  279 (296)
T ss_pred             CCCHHHHhhChHhhhccccc
Confidence            99999999999998776543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.84  E-value=3.9e-21  Score=117.32  Aligned_cols=94  Identities=24%  Similarity=0.260  Sum_probs=78.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+.......+..+....+  ...+..+.+++++||..+|.+
T Consensus       192 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~l~~dp~~  269 (340)
T PTZ00426        192 PEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP--KFLDNNCKHLMKKLLSHDLTK  269 (340)
T ss_pred             hhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHcccCHHH
Confidence            369999999988889999999999999999999999988877666666655543322  245678899999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.++++||||++.
T Consensus       270 R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        270 RYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             cCCCCCCCHHHHHcCCCcCCC
Confidence            96     89999999999864

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.84  E-value=6.2e-21  Score=115.63  Aligned_cols=94  Identities=19%  Similarity=0.303  Sum_probs=78.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+.......+........  ...+..+.+++.+||..+|++
T Consensus       164 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~  241 (323)
T cd05584         164 IEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP--PYLTPEARDLLKKLLKRNPSS  241 (323)
T ss_pred             ccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHcccCHhH
Confidence            369999999888889999999999999999999999988876666656555433222  245678899999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.+++.|+||+..
T Consensus       242 R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         242 RLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             cCCCCCCCHHHHhcCCCcCCC
Confidence            99     89999999999754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.84  E-value=9.6e-21  Score=114.83  Aligned_cols=94  Identities=17%  Similarity=0.211  Sum_probs=78.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.+..+....+.......+.  ..+.++.+++.+||..+|.+
T Consensus       165 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~li~~~l~~~P~~  242 (324)
T cd05587         165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK--SLSKEAVSICKGLLTKHPAK  242 (324)
T ss_pred             ccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHH
Confidence            3699999999988999999999999999999999999988776666666554433222  45678889999999999999


Q ss_pred             CCCH-----HHHhcCcccccc
Q psy2811          81 RPFA-----KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~-----~~~l~~~~~~~~   96 (108)
                      |++.     .++++||||+..
T Consensus       243 R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         243 RLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             cCCCCCCCHHHHhcCCCcCCC
Confidence            9976     899999999764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.84  E-value=1.2e-20  Score=111.53  Aligned_cols=92  Identities=30%  Similarity=0.545  Sum_probs=71.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...........+.........+......+++++ .||..+|++|
T Consensus       174 ~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~R  252 (266)
T cd06651         174 YWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHR  252 (266)
T ss_pred             cccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhC
Confidence            589999998888889999999999999999999999877655444443332222211223466777888 6777899999


Q ss_pred             CCHHHHhcCcccc
Q psy2811          82 PFAKELLRHPLLK   94 (108)
Q Consensus        82 ~~~~~~l~~~~~~   94 (108)
                      |+++++++||||+
T Consensus       253 p~~~eil~hp~~~  265 (266)
T cd06651         253 PSAEELLRHPFAQ  265 (266)
T ss_pred             cCHHHHhcCcccc
Confidence            9999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.84  E-value=7.5e-21  Score=113.48  Aligned_cols=95  Identities=19%  Similarity=0.194  Sum_probs=73.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---HH-HhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM---RA-LFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||...+..   +. ...+......  .....+..+.+++++||..
T Consensus       165 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~li~~~l~~  242 (285)
T cd05631         165 VGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEE--YSEKFSEDAKSICRMLLTK  242 (285)
T ss_pred             CCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccccc--CCccCCHHHHHHHHHHhhc
Confidence            3699999999999999999999999999999999999875432   11 2222221111  1123467889999999999


Q ss_pred             CCCCCCC-----HHHHhcCccccccc
Q psy2811          77 DLEERPF-----AKELLRHPLLKKGA   97 (108)
Q Consensus        77 ~p~~R~~-----~~~~l~~~~~~~~~   97 (108)
                      ||.+|++     ++++++||||++..
T Consensus       243 ~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         243 NPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             CHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence            9999996     89999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0591|consensus

Probab=99.84  E-value=6.5e-21  Score=111.53  Aligned_cols=84  Identities=24%  Similarity=0.364  Sum_probs=77.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |.||+||++.+.+|+.++||||+||++|+|..-++||.+.+......+|.++..++.+....+.++..++..|+..|+..
T Consensus       192 PyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~  271 (375)
T KOG0591|consen  192 PYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQ  271 (375)
T ss_pred             CcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCccc
Confidence            67999999999999999999999999999999999999998888888899887776665567899999999999999999


Q ss_pred             CCCH
Q psy2811          81 RPFA   84 (108)
Q Consensus        81 R~~~   84 (108)
                      ||+.
T Consensus       272 RP~t  275 (375)
T KOG0591|consen  272 RPDT  275 (375)
T ss_pred             CCCc
Confidence            9984

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.84  E-value=1.2e-20  Score=115.92  Aligned_cols=95  Identities=22%  Similarity=0.308  Sum_probs=72.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC----------------------CCCC-
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP----------------------PPQL-   57 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~----------------------~~~~-   57 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+..+...++....                      +... 
T Consensus       189 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (364)
T cd07875         189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG  268 (364)
T ss_pred             CCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCC
Confidence            36999999999999999999999999999999999998766544332221100                      0000 


Q ss_pred             -----------------CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          58 -----------------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        58 -----------------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                                       .....+..+.+++.+||+.||.+|||+.++++||||..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             CChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                             00012456789999999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.84  E-value=9.2e-21  Score=114.92  Aligned_cols=94  Identities=23%  Similarity=0.221  Sum_probs=77.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+.......+.......+  ...+..+.+++.+||..||.+
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~li~~~L~~dP~~  236 (323)
T cd05595         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP--RTLSPEAKSLLAGLLKKDPKQ  236 (323)
T ss_pred             cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHccCCHHH
Confidence            369999999988899999999999999999999999988776655555444333222  245778899999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.++++|+||.+.
T Consensus       237 R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         237 RLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             hCCCCCCCHHHHHcCCCcCCC
Confidence            98     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PHA02988 hypothetical protein; Provisional

Probab=99.84  E-value=1.6e-20  Score=112.08  Aligned_cols=88  Identities=23%  Similarity=0.239  Sum_probs=71.0

Q ss_pred             cccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||.+.+  ..++.++|+||+|+++|++++|..||.+.+..+....+.........+...+..+.+++.+||+.||.
T Consensus       185 ~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~  264 (283)
T PHA02988        185 VYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSI  264 (283)
T ss_pred             cccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcc
Confidence            5999999876  67899999999999999999999999987766655555333322222224578899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.++++
T Consensus       265 ~Rps~~ell~  274 (283)
T PHA02988        265 KRPNIKEILY  274 (283)
T ss_pred             cCcCHHHHHH
Confidence            9999999984

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.5e-20  Score=113.46  Aligned_cols=95  Identities=22%  Similarity=0.227  Sum_probs=78.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|+++|++++|..||.+.+.......+.............+..+.+++.+||..+|++|
T Consensus       197 ~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  276 (316)
T cd05574         197 EYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKR  276 (316)
T ss_pred             CCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHC
Confidence            48999999888888899999999999999999999988776655555544433332222247889999999999999999


Q ss_pred             CC----HHHHhcCcccccc
Q psy2811          82 PF----AKELLRHPLLKKG   96 (108)
Q Consensus        82 ~~----~~~~l~~~~~~~~   96 (108)
                      ++    +++++.|+||++.
T Consensus       277 ~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         277 LGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             CCchhhHHHHHcCchhhcC
Confidence            99    9999999999875

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=2e-20  Score=111.50  Aligned_cols=106  Identities=34%  Similarity=0.512  Sum_probs=81.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-----------HHHhhccCCCCCCCCCcCCcHHHHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM-----------RALFQIPRNPPPQLTKRFDCVLLCDFV   70 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~   70 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||......           +....+.....+.......+..+.+++
T Consensus       167 ~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  246 (284)
T cd06620         167 TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFV  246 (284)
T ss_pred             ccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHH
Confidence            689999998888888999999999999999999999764331           222233322222222222456788999


Q ss_pred             HHHhhcCCCCCCCHHHHhcCcccccccccchhhhhhc
Q psy2811          71 NECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYW  107 (108)
Q Consensus        71 ~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~  107 (108)
                      .+|+..+|.+||++.++++|+||..........+..|
T Consensus       247 ~~~l~~dp~~Rpt~~e~~~~~~~~~~~~~~~~~~~~~  283 (284)
T cd06620         247 DACLLKDPTERPTPQQLCAMPPFIQALRASNVDLQAW  283 (284)
T ss_pred             HHHhcCCcccCcCHHHHhcCcccccccccccCCcccc
Confidence            9999999999999999999999987777766666666

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.84  E-value=1.5e-20  Score=119.48  Aligned_cols=95  Identities=21%  Similarity=0.211  Sum_probs=79.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|..||.+.+..+....+........+ ...+.++.+++.+||..+|.+
T Consensus       209 ~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~L~~dP~~  287 (496)
T PTZ00283        209 PYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLP-PSISPEMQEIVTALLSSDPKR  287 (496)
T ss_pred             cceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHcccChhh
Confidence            3599999999988999999999999999999999999888776666555544433322 245788999999999999999


Q ss_pred             CCCHHHHhcCcccccc
Q psy2811          81 RPFAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~   96 (108)
                      ||++.++++|+|++..
T Consensus       288 RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        288 RPSSSKLLNMPICKLF  303 (496)
T ss_pred             CcCHHHHHhCHHHHHh
Confidence            9999999999997653

>KOG0983|consensus

Probab=99.84  E-value=1.2e-20  Score=110.31  Aligned_cols=106  Identities=33%  Similarity=0.574  Sum_probs=85.3

Q ss_pred             Ccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcC-CcHHHHHHHHHHhh
Q psy2811           1 MSVIACEQQLD---MSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRF-DCVLLCDFVNECLR   75 (108)
Q Consensus         1 ~~y~ape~~~~---~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~   75 (108)
                      +.|||||.+-.   ..|+.++||||+|+.++++.||+.||.+.+ ..+.+.++.+..++.++... .++.+.+|+..||+
T Consensus       255 ~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~  334 (391)
T KOG0983|consen  255 AAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLT  334 (391)
T ss_pred             ccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhh
Confidence            46999999854   458889999999999999999999999864 46667777776665554433 58889999999999


Q ss_pred             cCCCCCCCHHHHhcCcccccccccchhhhhhc
Q psy2811          76 KDLEERPFAKELLRHPLLKKGAQLAHQELTYW  107 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~  107 (108)
                      +|+.+||...++++|+|+..-.... .++..|
T Consensus       335 kd~r~RP~Y~~Ll~h~Fi~~ye~a~-~dVa~W  365 (391)
T KOG0983|consen  335 KDHRKRPKYNKLLEHPFIKRYETAE-VDVASW  365 (391)
T ss_pred             cCcccCcchHHHhcCcceeecchhh-ccHHHH
Confidence            9999999999999999998765444 344444

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.84  E-value=1.7e-20  Score=115.06  Aligned_cols=94  Identities=26%  Similarity=0.347  Sum_probs=70.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC----------------------CCCCCC--
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR----------------------NPPPQL--   57 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~--   57 (108)
                      .|+|||++.+..++.++|+||+|+++|++++|..||.+.+..+....+..                      ..+...  
T Consensus       187 ~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (359)
T cd07876         187 YYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGI  266 (359)
T ss_pred             CCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCc
Confidence            59999999999999999999999999999999999987654332111100                      000000  


Q ss_pred             ----------------CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          58 ----------------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        58 ----------------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                                      .....+..+++++.+||..||++||++.|+++|||+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         267 SFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             chhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                            00012457889999999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.84  E-value=2.6e-20  Score=110.82  Aligned_cols=103  Identities=28%  Similarity=0.486  Sum_probs=76.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHh
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-------MRALFQIPRNPPPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||.....       ......+.............+.++.+++.+||
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  237 (279)
T cd06619         158 AYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCM  237 (279)
T ss_pred             hhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHh
Confidence            68999999988899999999999999999999999864321       11112222222222222234678899999999


Q ss_pred             hcCCCCCCCHHHHhcCcccccccccchhhh
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGAQLAHQEL  104 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~~~~~~~~  104 (108)
                      +.+|.+||+++++++|+||........+-+
T Consensus       238 ~~~P~~Rp~~~eil~~~~~~~~~~~~~~~~  267 (279)
T cd06619         238 RKQPKERPAPENLMDHPFIVQYNDGNAEVV  267 (279)
T ss_pred             hCChhhCCCHHHHhcCcccccccCccHHHH
Confidence            999999999999999999987755554433

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.84  E-value=1.9e-20  Score=113.63  Aligned_cols=97  Identities=32%  Similarity=0.503  Sum_probs=69.8

Q ss_pred             cccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-----------------------
Q psy2811           2 SVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-----------------------   56 (108)
Q Consensus         2 ~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------   56 (108)
                      .|+|||++.+  ..++.++|+||+|++++++++|..||.................+.                       
T Consensus       173 ~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (327)
T cd08227         173 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANS  252 (327)
T ss_pred             cccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcC
Confidence            4899999876  458889999999999999999999997643322111111100000                       


Q ss_pred             ---------------------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          57 ---------------------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        57 ---------------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                                           ......+..+.+++++||+.||++||++.++++||||+....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~  315 (327)
T cd08227         253 GLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  315 (327)
T ss_pred             CCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcch
Confidence                                 000012457889999999999999999999999999987543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.84  E-value=2.3e-20  Score=109.51  Aligned_cols=92  Identities=53%  Similarity=0.904  Sum_probs=72.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...........+........ .....+..+.+++.+||..+|++
T Consensus       164 ~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~  243 (256)
T cd06612         164 FWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEE  243 (256)
T ss_pred             cccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhh
Confidence            58999999888889999999999999999999999987655443333222222111 11123567899999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      ||++.+++.|+||
T Consensus       244 Rps~~~il~~~~~  256 (256)
T cd06612         244 RPSAIQLLQHPFI  256 (256)
T ss_pred             CcCHHHHhcCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.84  E-value=9.9e-21  Score=114.73  Aligned_cols=94  Identities=15%  Similarity=0.159  Sum_probs=78.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+.......+.......+.  ..+.++.+++.+||+.+|.+
T Consensus       165 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~l~~~p~~  242 (323)
T cd05616         165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGK  242 (323)
T ss_pred             hhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC--cCCHHHHHHHHHHcccCHHh
Confidence            3699999999999999999999999999999999999988776666666554433222  45778899999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     ..++++|+||+..
T Consensus       243 R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         243 RLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             cCCCCCCCHHHHhcCCCcCCC
Confidence            997     4889999999754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.84  E-value=1.3e-20  Score=112.65  Aligned_cols=93  Identities=24%  Similarity=0.292  Sum_probs=69.2

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCC------------------CCC-
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPP------------------PQL-   57 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~------------------~~~-   57 (108)
                      +.|+|||.+.+ ..++.++|+||+|++++++++|..||.+.+..+.+..+..   .+.                  +.. 
T Consensus       167 ~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (288)
T cd07871         167 LWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYR  246 (288)
T ss_pred             ccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccC
Confidence            35999999865 5578899999999999999999999987665443322211   000                  000 


Q ss_pred             ------CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          58 ------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        58 ------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                            .....+.+..+++++||..||.+|+|+.|+++||||
T Consensus       247 ~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         247 AQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             CCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence                  001235678899999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.83  E-value=9.8e-21  Score=115.07  Aligned_cols=97  Identities=26%  Similarity=0.291  Sum_probs=70.6

Q ss_pred             cccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc---------------------------cCC
Q psy2811           2 SVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---------------------------PRN   52 (108)
Q Consensus         2 ~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~---------------------------~~~   52 (108)
                      .|+|||++.+  ..++.++|+||+|++++++++|..||.+.+.......+                           ...
T Consensus       171 ~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  250 (338)
T cd07859         171 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKK  250 (338)
T ss_pred             CcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhccc
Confidence            5899999865  56788999999999999999999999765532211100                           000


Q ss_pred             CCCCCC--CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          53 PPPQLT--KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        53 ~~~~~~--~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      ......  ....+..+.+++.+||..+|++||+++++++||||++...
T Consensus       251 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         251 QPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             CCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            000000  0123466789999999999999999999999999977544

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.83  E-value=2.3e-20  Score=109.62  Aligned_cols=91  Identities=18%  Similarity=0.332  Sum_probs=75.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+...+.++|+||+|++++++++|..||...+..+....+..+..+... ...+.++.+++.+||+.+|.+|
T Consensus       166 ~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R  244 (256)
T cd08218         166 YYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVS-SHYSYDLRNLVSQLFKRNPRDR  244 (256)
T ss_pred             cccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCc-ccCCHHHHHHHHHHhhCChhhC
Confidence            589999998888888999999999999999999999877766655555444433322 2456788999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++|+||
T Consensus       245 p~~~~vl~~~~~  256 (256)
T cd08218         245 PSVNSILEKNFI  256 (256)
T ss_pred             cCHHHHhhCcCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0603|consensus

Probab=99.83  E-value=1e-20  Score=119.53  Aligned_cols=88  Identities=23%  Similarity=0.233  Sum_probs=76.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|.|||++....|+..+|+||+|+++|+|++|..||...... ++..++..+...    ...+..+++|++.||+.||.+
T Consensus       478 ~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s----~~vS~~AKdLl~~LL~~dP~~  553 (612)
T KOG0603|consen  478 QYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS----ECVSDEAKDLLQQLLQVDPAL  553 (612)
T ss_pred             cccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc----cccCHHHHHHHHHhccCChhh
Confidence            589999999999999999999999999999999999876543 555555444332    356889999999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      |+++.++..|+|+
T Consensus       554 Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  554 RLGADEIGAHPWF  566 (612)
T ss_pred             CcChhhhccCcch
Confidence            9999999999999

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.83  E-value=1.4e-20  Score=112.14  Aligned_cols=92  Identities=21%  Similarity=0.135  Sum_probs=69.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC------------------CCCCC------
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN------------------PPPQL------   57 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~------------------~~~~~------   57 (108)
                      .|+|||++.+..++.++|+||+|++++++++|.++|.+....+...++...                  .....      
T Consensus       172 ~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (288)
T cd07863         172 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQ  251 (288)
T ss_pred             cccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchH
Confidence            599999998888999999999999999999999999776554333222110                  00000      


Q ss_pred             -CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          58 -TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        58 -~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                       .....+..+.+++.+||..||++||++.+++.||||
T Consensus       252 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         252 SVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             HhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence             000224567899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.83  E-value=2.9e-20  Score=110.64  Aligned_cols=102  Identities=35%  Similarity=0.631  Sum_probs=78.1

Q ss_pred             ccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+.     +..++.++|+||+|++++++++|..||...+.......+....... ..+...+.++.+++.+||.
T Consensus       168 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  247 (282)
T cd06643         168 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLE  247 (282)
T ss_pred             cccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHcc
Confidence            599999874     3446778999999999999999999998776655544443332221 1122346789999999999


Q ss_pred             cCCCCCCCHHHHhcCcccccccccchhh
Q psy2811          76 KDLEERPFAKELLRHPLLKKGAQLAHQE  103 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~~~~~~~~  103 (108)
                      .+|.+||++.++++|+|++.....+..+
T Consensus       248 ~~p~~Rp~~~~il~~~~~~~~~~~~~~~  275 (282)
T cd06643         248 KNVDARWTTTQLLQHPFVTVNSNKPIRE  275 (282)
T ss_pred             CChhhCcCHHHHhcCCCEeccCCCCHHH
Confidence            9999999999999999998776655444

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=9e-21  Score=115.28  Aligned_cols=96  Identities=20%  Similarity=0.218  Sum_probs=75.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC--CCCC----CcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--PQLT----KRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||.+.+..++.++|+||+|+++|+|++|..||...+..+....+.....  ....    ....+.++.+++.+||
T Consensus       162 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l  241 (333)
T cd05600         162 PDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLI  241 (333)
T ss_pred             ccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHh
Confidence            469999999998999999999999999999999999988776554433322111  0000    1123678899999999


Q ss_pred             hcCCCCCCCHHHHhcCcccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ..+|.+|+++.++++|+||++.
T Consensus       242 ~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         242 NDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             hChhhhcCCHHHHHhCcccCCC
Confidence            9999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.83  E-value=1.5e-20  Score=113.70  Aligned_cols=94  Identities=20%  Similarity=0.285  Sum_probs=77.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+.+.......+....+.. + ...+.++.+++.+||..+|++
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-~-~~~~~~~~~ll~~~l~~~P~~  237 (316)
T cd05592         160 PDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHF-P-RWISKEAKDCLSKLFERDPTK  237 (316)
T ss_pred             ccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-C-CCCCHHHHHHHHHHccCCHHH
Confidence            46999999998889999999999999999999999999887766655554433222 2 245778899999999999999


Q ss_pred             CCCH-HHHhcCcccccc
Q psy2811          81 RPFA-KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~-~~~l~~~~~~~~   96 (108)
                      |+++ .++++|+||+..
T Consensus       238 R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         238 RLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             cCCChHHHHcCcccCCC
Confidence            9986 578899999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.83  E-value=2.8e-20  Score=109.68  Aligned_cols=94  Identities=44%  Similarity=0.615  Sum_probs=73.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL-----HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||...     ...+....+.....+.......+.++.+++..||..
T Consensus       164 ~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  243 (265)
T cd06605         164 SYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIK  243 (265)
T ss_pred             hccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCC
Confidence            599999998888899999999999999999999998654     222333333333333322222567889999999999


Q ss_pred             CCCCCCCHHHHhcCccccc
Q psy2811          77 DLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~   95 (108)
                      +|++||++.+++.||||+.
T Consensus       244 ~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         244 DPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             CchhCcCHHHHhhCchhhc
Confidence            9999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0596|consensus

Probab=99.83  E-value=1e-20  Score=118.46  Aligned_cols=95  Identities=26%  Similarity=0.433  Sum_probs=71.1

Q ss_pred             CccccccccccCC-----------CCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCC-CCCCcCCcHHHH
Q psy2811           1 MSVIACEQQLDMS-----------YDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPP-QLTKRFDCVLLC   67 (108)
Q Consensus         1 ~~y~ape~~~~~~-----------~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~   67 (108)
                      ++||+||.+....           .+.++||||+||++|+|+.|++||.... ....+..|...... ..+......++.
T Consensus       525 ~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li  604 (677)
T KOG0596|consen  525 VNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELI  604 (677)
T ss_pred             ccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHH
Confidence            4799999985433           3468999999999999999999998764 33344444433221 111112234488


Q ss_pred             HHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          68 DFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                      ++++.||..||.+|+++.++|+|||+..
T Consensus       605 ~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  605 DVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            9999999999999999999999999986

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.83  E-value=3.4e-20  Score=110.65  Aligned_cols=97  Identities=36%  Similarity=0.594  Sum_probs=78.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC-cCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||...+......++.....+.... ...+..+.+++.+||..+|++
T Consensus       180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  259 (285)
T cd06648         180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQ  259 (285)
T ss_pred             cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhh
Confidence            5999999988888999999999999999999999998776555554444433222211 124678899999999999999


Q ss_pred             CCCHHHHhcCcccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~   98 (108)
                      ||++.++++|+|++....
T Consensus       260 Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         260 RATAAELLNHPFLAKAGP  277 (285)
T ss_pred             CcCHHHHccCcccccCCC
Confidence            999999999999987764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.83  E-value=3.9e-20  Score=108.55  Aligned_cols=91  Identities=27%  Similarity=0.521  Sum_probs=75.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...+.......+.....+.... ..+..+.+++.+||+.+|++|
T Consensus       166 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~p~~R  244 (256)
T cd08529         166 YYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQ-MYSQQLAQLIDQCLTKDYRQR  244 (256)
T ss_pred             cccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc-ccCHHHHHHHHHHccCCcccC
Confidence            5899999988888999999999999999999999998877665555554444333222 446788999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++|+|+
T Consensus       245 p~~~~ll~~~~~  256 (256)
T cd08529         245 PDTFQLLRNPSL  256 (256)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7.3e-21  Score=116.18  Aligned_cols=95  Identities=25%  Similarity=0.260  Sum_probs=76.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC--CCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR--NPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||..........++..  .....+.....+..+.+++.+|+. +|
T Consensus       194 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp  272 (350)
T cd05573         194 PDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DP  272 (350)
T ss_pred             ccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Ch
Confidence            369999999999999999999999999999999999988776655555444  222222221247889999999997 99


Q ss_pred             CCCCC-HHHHhcCcccccc
Q psy2811          79 EERPF-AKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~-~~~~l~~~~~~~~   96 (108)
                      .+|++ +.++++||||++.
T Consensus       273 ~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         273 EDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             hhcCCCHHHHhcCCCcCCC
Confidence            99999 9999999999764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.83  E-value=2.9e-20  Score=113.89  Aligned_cols=95  Identities=23%  Similarity=0.331  Sum_probs=70.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC----------------------CCC----
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR----------------------NPP----   54 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~----------------------~~~----   54 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.+..+....+..                      ..+    
T Consensus       182 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (355)
T cd07874         182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG  261 (355)
T ss_pred             CCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccc
Confidence            369999999998899999999999999999999999987654332211100                      000    


Q ss_pred             ---CC------C-----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          55 ---PQ------L-----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        55 ---~~------~-----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                         +.      .     ........+.+++.+||..||++||++.|+++||||..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence               00      0     00012456789999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=6.2e-20  Score=108.91  Aligned_cols=103  Identities=39%  Similarity=0.629  Sum_probs=78.8

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+ ..++.++|+||+|+++|++++|..||...........+.....+.......+.++.+++.+||+.+|++
T Consensus       166 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  245 (277)
T cd06917         166 YWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKE  245 (277)
T ss_pred             ceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHHcCCCccc
Confidence            4899998865 446789999999999999999999998776554443333332332222224678899999999999999


Q ss_pred             CCCHHHHhcCcccccccccchhhh
Q psy2811          81 RPFAKELLRHPLLKKGAQLAHQEL  104 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~~~~~~  104 (108)
                      ||++.+++.|+|++.....+...+
T Consensus       246 R~~~~~il~~~~~~~~~~~~~~~~  269 (277)
T cd06917         246 RLSAEELLKSKWIKAHSKTPVSIL  269 (277)
T ss_pred             CcCHHHHhhChHhhccccCchhhH
Confidence            999999999999988765555443

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0585|consensus

Probab=99.83  E-value=1.5e-20  Score=116.03  Aligned_cols=108  Identities=23%  Similarity=0.253  Sum_probs=91.0

Q ss_pred             CccccccccccCC---C-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMS---Y-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~---~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      |.|+|||...++.   + +.+.|||++|+++|.++.|+.||-+....+.+.+|...+...+........++++|+++|.+
T Consensus       279 PAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~K  358 (576)
T KOG0585|consen  279 PAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEK  358 (576)
T ss_pred             ccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhc
Confidence            6799999987633   3 34799999999999999999999999999999999888776665444578899999999999


Q ss_pred             CCCCCCCHHHHhcCcccccccccchhhhhhcC
Q psy2811          77 DLEERPFAKELLRHPLLKKGAQLAHQELTYWC  108 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~~~~~~~~~~~~~~  108 (108)
                      ||.+|.++.+|..|||...........-..+|
T Consensus       359 dP~~Ri~l~~ik~Hpwvt~~g~~~~~s~~~~c  390 (576)
T KOG0585|consen  359 DPEQRITLPDIKLHPWVTRDGDSPQSSEPSSC  390 (576)
T ss_pred             ChhheeehhhheecceeccCCCCCccCCcccc
Confidence            99999999999999999877666655555554

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.83  E-value=5e-20  Score=108.78  Aligned_cols=91  Identities=34%  Similarity=0.582  Sum_probs=73.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...+......++.....+... ...+..+.+++++||+.+|.+|
T Consensus       177 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R  255 (267)
T cd06628         177 FWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIP-SNISSEAIDFLEKTFEIDHNKR  255 (267)
T ss_pred             CccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCC-cccCHHHHHHHHHHccCCchhC
Confidence            589999998888888999999999999999999999877655544443333222222 2356788999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++|+||
T Consensus       256 p~~~~il~~~~~  267 (267)
T cd06628         256 PTAAELLKHPFL  267 (267)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.83  E-value=2.6e-20  Score=121.78  Aligned_cols=96  Identities=26%  Similarity=0.312  Sum_probs=78.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|..||.+......+..+......... .......+.+++.+||..||.
T Consensus       544 ~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~  623 (669)
T cd05610         544 PDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPT  623 (669)
T ss_pred             ccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChh
Confidence            4699999999988999999999999999999999999888776666665444332221 113356788999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +|+++.++++|+||...
T Consensus       624 ~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         624 KRAGLKELKQHPLFHGV  640 (669)
T ss_pred             HCcCHHHHHhCHhhcCC
Confidence            99999999999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.83  E-value=2.8e-21  Score=117.18  Aligned_cols=94  Identities=22%  Similarity=0.229  Sum_probs=78.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+.......+.......+  ...+.++.+++.+||..||++
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~L~~dP~~  237 (325)
T cd05594         160 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP--RTLSPEAKSLLSGLLKKDPKQ  237 (325)
T ss_pred             cccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC--CCCCHHHHHHHHHHhhcCHHH
Confidence            369999999988899999999999999999999999988776655555544433322  245778999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.++++|+||.+.
T Consensus       238 R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         238 RLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             hCCCCCCCHHHHhcCCCcCCC
Confidence            97     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0192|consensus

Probab=99.83  E-value=4.8e-20  Score=112.81  Aligned_cols=89  Identities=22%  Similarity=0.304  Sum_probs=73.7

Q ss_pred             Cccccccccc--cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQL--DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~--~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|||||++.  ...|+.++||||||+++|++++|..||...........+.....++..+......+..++..||..||
T Consensus       208 ~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp  287 (362)
T KOG0192|consen  208 YRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDP  287 (362)
T ss_pred             ccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCC
Confidence            3699999999  56899999999999999999999999999887655555554444444333477889999999999999


Q ss_pred             CCCCCHHHHhc
Q psy2811          79 EERPFAKELLR   89 (108)
Q Consensus        79 ~~R~~~~~~l~   89 (108)
                      ..||++.+++.
T Consensus       288 ~~RP~f~ei~~  298 (362)
T KOG0192|consen  288 SRRPSFLEIVS  298 (362)
T ss_pred             CcCCCHHHHHH
Confidence            99999998863

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.83  E-value=4.1e-20  Score=110.70  Aligned_cols=99  Identities=33%  Similarity=0.568  Sum_probs=77.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...........+........ .....+..+.+++.+|+..+|++
T Consensus       183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  262 (292)
T cd06658         183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQ  262 (292)
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhH
Confidence            59999999888889999999999999999999999987765544443332222111 11134677889999999999999


Q ss_pred             CCCHHHHhcCcccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~~  100 (108)
                      ||++.++++|+||+......
T Consensus       263 Rpt~~~il~~~~~~~~~~~~  282 (292)
T cd06658         263 RATAQELLQHPFLKLAGPPS  282 (292)
T ss_pred             CcCHHHHhhChhhhccCCcc
Confidence            99999999999998765544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.82  E-value=5.5e-20  Score=107.91  Aligned_cols=91  Identities=20%  Similarity=0.271  Sum_probs=74.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||...+.......+......... ...+..+.+++..||..+|.+|
T Consensus       166 ~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~R  244 (256)
T cd08220         166 CYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPIS-DRYSPDLRQLILSMLNLDPSKR  244 (256)
T ss_pred             cccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCC-CCcCHHHHHHHHHHccCChhhC
Confidence            599999998888888999999999999999999999887665555444443332222 2356788999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++|||+
T Consensus       245 pt~~~ll~~p~~  256 (256)
T cd08220         245 PQLSQIMAQPIC  256 (256)
T ss_pred             CCHHHHhhCCCC
Confidence            999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.82  E-value=3.5e-20  Score=117.43  Aligned_cols=95  Identities=21%  Similarity=0.221  Sum_probs=79.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.+..+....+..+.....+ ...+..+.+++.+||..+|++
T Consensus       235 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~li~~~L~~dP~~  313 (478)
T PTZ00267        235 PYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFP-CPVSSGMKALLDPLLSKNPAL  313 (478)
T ss_pred             ccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC-ccCCHHHHHHHHHHhccChhh
Confidence            3699999999888999999999999999999999999888776666665544433222 245678999999999999999


Q ss_pred             CCCHHHHhcCcccccc
Q psy2811          81 RPFAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~   96 (108)
                      ||++.+++.|+|++..
T Consensus       314 Rps~~~~l~~~~~~~~  329 (478)
T PTZ00267        314 RPTTQQLLHTEFLKYV  329 (478)
T ss_pred             CcCHHHHHhCHHHHHH
Confidence            9999999999998654

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=5e-20  Score=108.92  Aligned_cols=92  Identities=59%  Similarity=0.996  Sum_probs=71.0

Q ss_pred             cccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC-cCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLD-----MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~-----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~   75 (108)
                      .|+|||.+..     ..++.++|+|++|++++++++|..||...........+.......... ...+..+.+++.+||.
T Consensus       178 ~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  257 (275)
T cd06608         178 YWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLI  257 (275)
T ss_pred             cccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhh
Confidence            5899998753     335678999999999999999999998765544444444443322221 1245688999999999


Q ss_pred             cCCCCCCCHHHHhcCccc
Q psy2811          76 KDLEERPFAKELLRHPLL   93 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~   93 (108)
                      .||++||++.++++|||+
T Consensus       258 ~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         258 KNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             cChhhCcCHHHHhcCCCC
Confidence            999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.82  E-value=8.4e-20  Score=107.76  Aligned_cols=92  Identities=36%  Similarity=0.554  Sum_probs=72.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC-CCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN-PPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...+.......+... ..........+..+.+++++||..+|.+
T Consensus       173 ~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  252 (265)
T cd06631         173 YWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHE  252 (265)
T ss_pred             cccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCccc
Confidence            589999998888899999999999999999999999876544433332222 1111112245678899999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      ||++.+++.||||
T Consensus       253 Rp~~~~~l~~~~~  265 (265)
T cd06631         253 RPSALQLLRHDFL  265 (265)
T ss_pred             CCCHHHHhcCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.82  E-value=2.8e-20  Score=111.84  Aligned_cols=98  Identities=18%  Similarity=0.213  Sum_probs=70.3

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhcc---CCCC----------C-C-------C
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIP---RNPP----------P-Q-------L   57 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~---~~~~----------~-~-------~   57 (108)
                      +.|+|||++.+ ..++.++|+||+|++++++++|..||.+... .+.+..+.   ..+.          + .       .
T Consensus       167 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (303)
T cd07869         167 LWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLY  246 (303)
T ss_pred             CCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccccccccc
Confidence            35999999865 4578889999999999999999999987532 22221110   0000          0 0       0


Q ss_pred             ---------CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          58 ---------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        58 ---------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                               .....+..+.+++.+||+.||++|+|+.++++||||+....
T Consensus       247 ~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~~  296 (303)
T cd07869         247 SPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLPP  296 (303)
T ss_pred             CCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCCh
Confidence                     00012356789999999999999999999999999988754

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=7.2e-20  Score=108.83  Aligned_cols=96  Identities=43%  Similarity=0.700  Sum_probs=75.2

Q ss_pred             cccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLD-----MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~-----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+..     ..++.++|+||+|+++|++++|..||..........++.....+.. .+...+.++.+++..||.
T Consensus       168 ~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  247 (280)
T cd06611         168 YWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLV  247 (280)
T ss_pred             hhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhc
Confidence            5899998753     3456789999999999999999999988766555555544433222 122346788999999999


Q ss_pred             cCCCCCCCHHHHhcCccccccc
Q psy2811          76 KDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+|.+||++.++++|+|+....
T Consensus       248 ~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         248 KDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             cChhhCcCHHHHhcChhhcccc
Confidence            9999999999999999998763

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.82  E-value=4.2e-20  Score=108.91  Aligned_cols=92  Identities=40%  Similarity=0.651  Sum_probs=72.3

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCc----CCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKR----FDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~l~~   76 (108)
                      .|++||.+... .++.++|+||+|++++++++|..||...+......++...........    ..+..+.+++.+||..
T Consensus       171 ~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  250 (267)
T cd06610         171 CWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQK  250 (267)
T ss_pred             hhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCC
Confidence            58999998776 678899999999999999999999987665544444333322222111    2357788999999999


Q ss_pred             CCCCCCCHHHHhcCccc
Q psy2811          77 DLEERPFAKELLRHPLL   93 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~   93 (108)
                      +|.+||++.+++.||||
T Consensus       251 ~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         251 DPSKRPTAEELLKHKFF  267 (267)
T ss_pred             ChhhCcCHHHHhhCCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0579|consensus

Probab=99.82  E-value=4.3e-20  Score=118.21  Aligned_cols=97  Identities=40%  Similarity=0.703  Sum_probs=84.2

Q ss_pred             Ccccccccc-----ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQ-----LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~-----~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l   74 (108)
                      |.|||||++     .+..|+.++||||+|+.+.+|..+.+|-...+.+..+.+|....++. ..++.-+..+.+|+++||
T Consensus       194 PYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL  273 (1187)
T KOG0579|consen  194 PYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCL  273 (1187)
T ss_pred             cccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHH
Confidence            579999986     36779999999999999999999999999999988888887765553 445556889999999999


Q ss_pred             hcCCCCCCCHHHHhcCccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ..+|..||++.++++|||+....
T Consensus       274 ~Knp~~Rp~aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  274 VKNPRNRPPAAQLLKHPFVQNAP  296 (1187)
T ss_pred             hcCCccCCCHHHHhhCcccccCC
Confidence            99999999999999999998653

>KOG0599|consensus

Probab=99.82  E-value=1.7e-20  Score=109.69  Aligned_cols=94  Identities=24%  Similarity=0.274  Sum_probs=80.1

Q ss_pred             Cccccccccc------cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCc--CCcHHHHHHHHH
Q psy2811           1 MSVIACEQQL------DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKR--FDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~------~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~   72 (108)
                      |+|+|||.+.      ..+|+..+|.|+.|+++|.++.|.+||-.....-.+..|..+...+..+.  ..+...++++.+
T Consensus       186 PgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsr  265 (411)
T KOG0599|consen  186 PGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISR  265 (411)
T ss_pred             CcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHH
Confidence            7899999984      46678889999999999999999999998887777777777766544332  347788999999


Q ss_pred             HhhcCCCCCCCHHHHhcCcccc
Q psy2811          73 CLRKDLEERPFAKELLRHPLLK   94 (108)
Q Consensus        73 ~l~~~p~~R~~~~~~l~~~~~~   94 (108)
                      ||+.||++|.|++++|+||||.
T Consensus       266 lLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  266 LLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             HHeeCchhcccHHHHhcChHHH
Confidence            9999999999999999999994

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.82  E-value=7.6e-20  Score=109.28  Aligned_cols=93  Identities=54%  Similarity=0.972  Sum_probs=71.5

Q ss_pred             ccccccccccCC-----CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLDMS-----YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~~~-----~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+....     ++.++|+||+|++++++++|..||...........+........ ........+.+++.+||.
T Consensus       193 ~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  272 (291)
T cd06639         193 FWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLI  272 (291)
T ss_pred             cccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhh
Confidence            589999875432     57799999999999999999999987765554444433322211 111235678899999999


Q ss_pred             cCCCCCCCHHHHhcCcccc
Q psy2811          76 KDLEERPFAKELLRHPLLK   94 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~   94 (108)
                      .+|++||++.++++||||+
T Consensus       273 ~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         273 KDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             cChhhCcCHHHHhcCcccC
Confidence            9999999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.82  E-value=5.8e-20  Score=109.44  Aligned_cols=95  Identities=22%  Similarity=0.206  Sum_probs=73.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||.+.+..++.++|+||+|+++|++++|..||.....    ......+......  .+...+..+.+++.+||+.
T Consensus       161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~  238 (280)
T cd05608         161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVT--YPDKFSPASKSFCEALLAK  238 (280)
T ss_pred             cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCC--CcccCCHHHHHHHHHHhcC
Confidence            369999999999999999999999999999999999976432    1222222222211  1123567889999999999


Q ss_pred             CCCCCC-----CHHHHhcCccccccc
Q psy2811          77 DLEERP-----FAKELLRHPLLKKGA   97 (108)
Q Consensus        77 ~p~~R~-----~~~~~l~~~~~~~~~   97 (108)
                      ||++|+     +++++++||||++..
T Consensus       239 ~P~~R~~~~~~~~~~~l~h~~~~~~~  264 (280)
T cd05608         239 DPEKRLGFRDGNCDGLRTHPLFRDLN  264 (280)
T ss_pred             CHHHhcCCCCCCHHHHhcChhhhcCC
Confidence            999999     789999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0197|consensus

Probab=99.82  E-value=3.1e-20  Score=115.07  Aligned_cols=87  Identities=21%  Similarity=0.275  Sum_probs=75.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|.|||.+....|+.++||||||+++|+++| |+.|+.+....+.+..+.++.. .+.+..++.++.++|..||..+|+
T Consensus       368 IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR-lp~P~~CP~~vY~lM~~CW~~~P~  446 (468)
T KOG0197|consen  368 IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR-LPRPEGCPDEVYELMKSCWHEDPE  446 (468)
T ss_pred             ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc-CCCCCCCCHHHHHHHHHHhhCCcc
Confidence            35899999999999999999999999999987 8999999988888877766543 333346789999999999999999


Q ss_pred             CCCCHHHHh
Q psy2811          80 ERPFAKELL   88 (108)
Q Consensus        80 ~R~~~~~~l   88 (108)
                      +|||++.+.
T Consensus       447 ~RPtF~~L~  455 (468)
T KOG0197|consen  447 DRPTFETLR  455 (468)
T ss_pred             cCCCHHHHH
Confidence            999999765

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.82  E-value=8.3e-20  Score=109.95  Aligned_cols=96  Identities=40%  Similarity=0.670  Sum_probs=76.0

Q ss_pred             ccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|++||.+.   ...++.++|+||+|+++|++++|..||...+.......+.....+.......+..+.+++.+||..+|
T Consensus       176 ~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  255 (307)
T cd06607         176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIP  255 (307)
T ss_pred             cccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCCh
Confidence            589999874   35577899999999999999999999988776555544443333332222346788999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      ++||++.+++.|+|+....
T Consensus       256 ~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         256 QDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             hhCcCHHHHhcChhhcccC
Confidence            9999999999999997664

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.82  E-value=8.5e-20  Score=107.15  Aligned_cols=91  Identities=20%  Similarity=0.316  Sum_probs=74.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...+.......+.......... ..+..+.+++.+||..+|++|
T Consensus       167 ~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~p~~R  245 (257)
T cd08225         167 YYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISP-NFSRDLRSLISQLFKVSPRDR  245 (257)
T ss_pred             cccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCC-CCCHHHHHHHHHHhccChhhC
Confidence            5899999888888899999999999999999999998776655554444433322221 346788999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++|+||
T Consensus       246 pt~~~ll~~~~~  257 (257)
T cd08225         246 PSITSILKRPFL  257 (257)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.82  E-value=4.5e-20  Score=113.72  Aligned_cols=95  Identities=24%  Similarity=0.275  Sum_probs=71.7

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC-----------------------CCCCC-
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR-----------------------NPPPQ-   56 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~-   56 (108)
                      .|+|||.+.+. .++.++|+||+|++++++++|..||.+.+..+....+..                       ..... 
T Consensus       169 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (372)
T cd07853         169 YYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPP  248 (372)
T ss_pred             CcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCC
Confidence            59999998774 478899999999999999999999987665433322211                       00000 


Q ss_pred             ------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 ------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                            ......+.++.+++.+||..||.+||++.++++||||++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         249 SLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             chHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence                  0011235678899999999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0667|consensus

Probab=99.82  E-value=2.5e-20  Score=117.86  Aligned_cols=95  Identities=31%  Similarity=0.410  Sum_probs=75.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC------------------------------
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR------------------------------   51 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~------------------------------   51 (108)
                      -|.|||++.|..|+.+.|+||+||++.||.+|.+.|.+.+..+++..|..                              
T Consensus       353 fYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~  432 (586)
T KOG0667|consen  353 FYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLC  432 (586)
T ss_pred             ccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeee
Confidence            38999999999999999999999999999999999998887766655410                              


Q ss_pred             ----------------------CCCCCC-CC--------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          52 ----------------------NPPPQL-TK--------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        52 ----------------------~~~~~~-~~--------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                            .....+ ..        ......+.+|+++||..||..|++..++++|||+...
T Consensus       433 ~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  433 VETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             eeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence                                  000000 00        0113467899999999999999999999999999844

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.82  E-value=1.9e-20  Score=113.48  Aligned_cols=94  Identities=23%  Similarity=0.229  Sum_probs=78.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+..+....+.........  ..+..+.+++.+||..+|.+
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~li~~~l~~~p~~  237 (323)
T cd05575         160 PEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP--NISVSARHLLEGLLQKDRTK  237 (323)
T ss_pred             hhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHh
Confidence            3699999999988999999999999999999999999887766666555554433222  34778899999999999999


Q ss_pred             CCCH----HHHhcCcccccc
Q psy2811          81 RPFA----KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~----~~~l~~~~~~~~   96 (108)
                      |+++    .+++.|+||...
T Consensus       238 R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         238 RLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            9986    699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.82  E-value=5.1e-20  Score=110.50  Aligned_cols=100  Identities=40%  Similarity=0.648  Sum_probs=77.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC-CCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP-PQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||.+.+.......+..... ....+...+..+.+++.+||..+|.+
T Consensus       180 ~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  259 (297)
T cd06656         180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDR  259 (297)
T ss_pred             cccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhh
Confidence            58999999888888999999999999999999999977654333322222211 11122234677889999999999999


Q ss_pred             CCCHHHHhcCcccccccccch
Q psy2811          81 RPFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~~~  101 (108)
                      ||++.++++|+||+.....+.
T Consensus       260 Rps~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         260 RGSAKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             CcCHHHHhcCchhcccccccc
Confidence            999999999999987765543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.82  E-value=1.5e-19  Score=108.16  Aligned_cols=99  Identities=37%  Similarity=0.593  Sum_probs=74.9

Q ss_pred             cccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLD-----MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~-----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+.+     ..++.++|+||+|+++|++++|..||...+......++.....+. ......+..+.+++.+||.
T Consensus       175 ~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  254 (292)
T cd06644         175 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALD  254 (292)
T ss_pred             cccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhc
Confidence            5899998853     345778999999999999999999997766554444443332221 1222346788899999999


Q ss_pred             cCCCCCCCHHHHhcCcccccccccc
Q psy2811          76 KDLEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      .+|++||++.++++|+|+.......
T Consensus       255 ~~p~~Rp~~~~il~~~~~~~~~~~~  279 (292)
T cd06644         255 KHPETRPSAAQLLEHPFVSSVTSNR  279 (292)
T ss_pred             CCcccCcCHHHHhcCccccccccch
Confidence            9999999999999999998654433

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.82  E-value=1e-19  Score=109.12  Aligned_cols=98  Identities=42%  Similarity=0.674  Sum_probs=75.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...........+.....+. ......+..+.+++.+||..+|++
T Consensus       181 ~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  260 (296)
T cd06654         181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEK  260 (296)
T ss_pred             cccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCccc
Confidence            5899999988888899999999999999999999998766544332222222111 112234577889999999999999


Q ss_pred             CCCHHHHhcCccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~   99 (108)
                      ||++.+++.|+|+......
T Consensus       261 Rpt~~eil~~~~~~~~~~~  279 (296)
T cd06654         261 RGSAKELLQHQFLKIAKPL  279 (296)
T ss_pred             CcCHHHHhhChhhhccCCc
Confidence            9999999999999766543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.82  E-value=1.1e-19  Score=108.48  Aligned_cols=96  Identities=38%  Similarity=0.581  Sum_probs=73.1

Q ss_pred             ccccccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhccCCCCCCCCCc---CCcHHHHHHHHHHh
Q psy2811           2 SVIACEQQLDM---SYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTKR---FDCVLLCDFVNECL   74 (108)
Q Consensus         2 ~y~ape~~~~~---~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~l   74 (108)
                      .|++||.+.+.   .++.++|+||+|++++++++|..||..... .....++.....+.....   ..+..+.+|+..||
T Consensus       172 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  251 (288)
T cd06616         172 PYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCL  251 (288)
T ss_pred             CccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHc
Confidence            58999998766   578899999999999999999999976542 223333333222222211   24678899999999


Q ss_pred             hcCCCCCCCHHHHhcCccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ..+|++||++.+++.|+||+.-.
T Consensus       252 ~~~p~~Rpt~~~i~~~~~~~~~~  274 (288)
T cd06616         252 IKDESKRPKYKELLEHPFIKDYE  274 (288)
T ss_pred             cCChhhCcCHHHHhcChhhhchh
Confidence            99999999999999999997643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.82  E-value=9e-20  Score=107.47  Aligned_cols=95  Identities=28%  Similarity=0.384  Sum_probs=75.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|++||.+.+..++.++|+|++|+++|++++|..||....  .......+.........+...+.++.+++.+||..+|.
T Consensus       157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  236 (262)
T cd05572         157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPE  236 (262)
T ss_pred             CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChh
Confidence            5899999888888899999999999999999999997765  44444444422222112223367899999999999999


Q ss_pred             CCCC-----HHHHhcCcccccc
Q psy2811          80 ERPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~-----~~~~l~~~~~~~~   96 (108)
                      +|++     +.|+++||||++-
T Consensus       237 ~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         237 ERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             hCcCCcccCHHHHhcChhhhCC
Confidence            9999     9999999999853

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.82  E-value=1.5e-19  Score=106.35  Aligned_cols=92  Identities=29%  Similarity=0.431  Sum_probs=75.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|++||.+.+..++.++|+|++|++++++++|..||...+.......+.....+... ...+..+.+++..|+..+|.+
T Consensus       174 ~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~p~~  252 (265)
T cd08217         174 PYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIP-YRYSSELNEVIKSMLNVDPDK  252 (265)
T ss_pred             CCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCc-cccCHHHHHHHHHHccCCccc
Confidence            3589999998888888999999999999999999999887655544444444333322 245678899999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      ||++.++++|||+
T Consensus       253 Rp~~~~il~~~~~  265 (265)
T cd08217         253 RPSTEELLQLPLI  265 (265)
T ss_pred             CCCHHHHhhCCCC
Confidence            9999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.82  E-value=8.5e-20  Score=109.96  Aligned_cols=96  Identities=22%  Similarity=0.166  Sum_probs=71.8

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC-------------------CCCC--C-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP-------------------PPQL--T-   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~-------------------~~~~--~-   58 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||...+..+....+....                   ....  . 
T Consensus       173 ~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (309)
T cd07845         173 WYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPY  252 (309)
T ss_pred             cccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCC
Confidence            4899999865 457889999999999999999999998776554433222100                   0000  0 


Q ss_pred             ------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          59 ------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        59 ------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                            ....+..+.+++.+||..||++||++.++++|+||++..
T Consensus       253 ~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~  297 (309)
T cd07845         253 NNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP  297 (309)
T ss_pred             CchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence                  001356788999999999999999999999999998553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.82  E-value=9.4e-20  Score=112.04  Aligned_cols=95  Identities=20%  Similarity=0.242  Sum_probs=72.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCCCcCCcHHHHHHHHHHhh--cC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCVLLCDFVNECLR--KD   77 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~--~~   77 (108)
                      .|+|||++.+..++.++|+||+|+++|+|++|..||.+....+...++....  ...+.....+.++++++.+++.  .+
T Consensus       201 ~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~  280 (363)
T cd05628         201 DYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEH  280 (363)
T ss_pred             cccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhh
Confidence            5999999999999999999999999999999999998877766665554422  1122222346788899988654  23


Q ss_pred             CCCCCCHHHHhcCcccccc
Q psy2811          78 LEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~   96 (108)
                      +..||+++++++||||++.
T Consensus       281 r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         281 RIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             cCCCCCHHHHhCCCCCCCC
Confidence            3356899999999999865

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.81  E-value=1.3e-19  Score=109.44  Aligned_cols=98  Identities=41%  Similarity=0.649  Sum_probs=76.1

Q ss_pred             ccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|++||.+.   +..++.++|+||+|++++++++|..|+...+.......+.....+.......+..+.+++.+||+.+|
T Consensus       182 ~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P  261 (313)
T cd06633         182 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIP  261 (313)
T ss_pred             cccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCh
Confidence            589999974   35577889999999999999999999987766555544443333322222345678899999999999


Q ss_pred             CCCCCHHHHhcCccccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      .+||++.++++|+||+.....
T Consensus       262 ~~Rp~~~~~l~~~~~~~~~~~  282 (313)
T cd06633         262 QERPASAELLRHDFVRRDRPA  282 (313)
T ss_pred             hhCcCHHHHhcCcccCCCchh
Confidence            999999999999999875433

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.81  E-value=7.7e-20  Score=108.60  Aligned_cols=95  Identities=52%  Similarity=0.810  Sum_probs=75.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..|+...........+.....+... ...+..+.+++.+||..+|.+|
T Consensus       166 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R  244 (277)
T cd06642         166 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLE-GQYSKPFKEFVEACLNKDPRFR  244 (277)
T ss_pred             cccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCC-cccCHHHHHHHHHHccCCcccC
Confidence            589999998888899999999999999999999998765544444333333222222 2346778899999999999999


Q ss_pred             CCHHHHhcCccccccc
Q psy2811          82 PFAKELLRHPLLKKGA   97 (108)
Q Consensus        82 ~~~~~~l~~~~~~~~~   97 (108)
                      |++.++++|+|+....
T Consensus       245 p~~~~il~~~~~~~~~  260 (277)
T cd06642         245 PTAKELLKHKFITRYT  260 (277)
T ss_pred             cCHHHHHHhHHHHHHh
Confidence            9999999999997554

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG1026|consensus

Probab=99.81  E-value=4e-20  Score=119.70  Aligned_cols=87  Identities=20%  Similarity=0.280  Sum_probs=77.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.||+||.|..+.|++.+||||+|+++||+++ |.-|+.+..+.+.+..+..+.. ..-+...+.++.+||.+||+..|+
T Consensus       669 IRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~  747 (774)
T KOG1026|consen  669 IRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPK  747 (774)
T ss_pred             eecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcc
Confidence            46999999999999999999999999999986 8999999988888888877776 333446789999999999999999


Q ss_pred             CCCCHHHHh
Q psy2811          80 ERPFAKELL   88 (108)
Q Consensus        80 ~R~~~~~~l   88 (108)
                      +||+|.||-
T Consensus       748 ~RPsF~eI~  756 (774)
T KOG1026|consen  748 RRPSFKEIH  756 (774)
T ss_pred             cCCCHHHHH
Confidence            999999985

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.81  E-value=9.1e-20  Score=109.24  Aligned_cols=98  Identities=43%  Similarity=0.695  Sum_probs=76.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC-CCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP-QLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||...+.......+.....+ .......+..+.++++.||..+|++
T Consensus       180 ~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  259 (293)
T cd06647         180 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEK  259 (293)
T ss_pred             hhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhh
Confidence            489999998888888999999999999999999999876554433332222211 1112233567889999999999999


Q ss_pred             CCCHHHHhcCccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~   99 (108)
                      ||++.+++.|+||+.....
T Consensus       260 Rp~~~~il~h~~~~~~~~~  278 (293)
T cd06647         260 RGSAKELLQHPFLKIAKPL  278 (293)
T ss_pred             CcCHHHHhcCHHHhcCccc
Confidence            9999999999999887643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.81  E-value=1.1e-19  Score=108.04  Aligned_cols=96  Identities=52%  Similarity=0.830  Sum_probs=76.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||...........+.....+... ...+..+.+++.+||..+|++|
T Consensus       166 ~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R  244 (277)
T cd06640         166 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLT-GEFSKPFKEFIDACLNKDPSFR  244 (277)
T ss_pred             cccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCc-hhhhHHHHHHHHHHcccCcccC
Confidence            489999998888889999999999999999999999876655444433333222222 1346778899999999999999


Q ss_pred             CCHHHHhcCcccccccc
Q psy2811          82 PFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        82 ~~~~~~l~~~~~~~~~~   98 (108)
                      |++.++++|+|+.....
T Consensus       245 p~~~~il~~~~~~~~~~  261 (277)
T cd06640         245 PTAKELLKHKFIVKNAK  261 (277)
T ss_pred             cCHHHHHhChHhhhcch
Confidence            99999999999976544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.81  E-value=2e-19  Score=108.00  Aligned_cols=96  Identities=35%  Similarity=0.614  Sum_probs=76.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...........+......... ....+..+.+++.+||+.+|.+
T Consensus       182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~  261 (297)
T cd06659         182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQE  261 (297)
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCccc
Confidence            699999998888899999999999999999999999876655555444333222211 1123667889999999999999


Q ss_pred             CCCHHHHhcCccccccc
Q psy2811          81 RPFAKELLRHPLLKKGA   97 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~   97 (108)
                      ||++.++++|+||....
T Consensus       262 Rps~~~ll~~~~~~~~~  278 (297)
T cd06659         262 RATAQELLDHPFLLQTG  278 (297)
T ss_pred             CcCHHHHhhChhhccCC
Confidence            99999999999998664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.81  E-value=1.1e-19  Score=110.30  Aligned_cols=94  Identities=16%  Similarity=0.199  Sum_probs=77.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.........+.......+.  ..+..+.+++.+||..+|.+
T Consensus       165 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~l~~~p~~  242 (323)
T cd05615         165 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK--SLSKEAVSICKGLMTKHPSK  242 (323)
T ss_pred             ccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc--cCCHHHHHHHHHHcccCHhh
Confidence            3699999999888999999999999999999999999888766655555544333222  45678889999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     ..++++|+||+..
T Consensus       243 R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         243 RLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CCCCCCCCHHHHhcCcccCCC
Confidence            997     4789999999865

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.81  E-value=1.4e-19  Score=107.96  Aligned_cols=97  Identities=45%  Similarity=0.687  Sum_probs=76.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...+.......+........ .....+..+.+++..||..+|.+
T Consensus       181 ~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  260 (286)
T cd06614         181 YWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEK  260 (286)
T ss_pred             ccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhh
Confidence            58999999888889999999999999999999999987765544443333322221 11124678999999999999999


Q ss_pred             CCCHHHHhcCcccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~   98 (108)
                      ||++.+++.|+||+....
T Consensus       261 Rpt~~~il~~~~~~~~~~  278 (286)
T cd06614         261 RPSAEELLQHPFLKKACP  278 (286)
T ss_pred             CcCHHHHhhChHhhccCc
Confidence            999999999999988433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.81  E-value=1.8e-19  Score=106.07  Aligned_cols=91  Identities=27%  Similarity=0.431  Sum_probs=74.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...........+.....+... ...+.++.+++.+||..+|++|
T Consensus       170 ~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R  248 (260)
T cd08222         170 YYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLP-ETYSRQLNSIMQSMLNKDPSLR  248 (260)
T ss_pred             CccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCc-chhcHHHHHHHHHHhcCChhhC
Confidence            589999988888888999999999999999999999776655555554443333222 2446788899999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++||||
T Consensus       249 p~~~~il~~~~~  260 (260)
T cd08222         249 PSAAEILRNPFI  260 (260)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.81  E-value=5.6e-20  Score=111.75  Aligned_cols=94  Identities=22%  Similarity=0.273  Sum_probs=71.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------HHH-HHhhccCCCCCCCCCcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--------PMR-ALFQIPRNPPPQLTKRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||....        ..+ ....+....... + ...+..+.++++
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p-~~~~~~~~~li~  237 (329)
T cd05588         160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRI-P-RSLSVKASSVLK  237 (329)
T ss_pred             ccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCC-C-CCCCHHHHHHHH
Confidence            36999999999899999999999999999999999996321        111 122222222221 2 245678899999


Q ss_pred             HHhhcCCCCCCC------HHHHhcCcccccc
Q psy2811          72 ECLRKDLEERPF------AKELLRHPLLKKG   96 (108)
Q Consensus        72 ~~l~~~p~~R~~------~~~~l~~~~~~~~   96 (108)
                      +||+.||.+|++      +.++++||||...
T Consensus       238 ~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         238 GFLNKDPKERLGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             HHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            999999999987      7899999999753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.81  E-value=2.2e-19  Score=108.24  Aligned_cols=97  Identities=33%  Similarity=0.560  Sum_probs=71.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC------------------------------
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR------------------------------   51 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~------------------------------   51 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||...+.......+..                              
T Consensus       163 ~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (308)
T cd06615         163 SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFEL  242 (308)
T ss_pred             CccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHH
Confidence            68999998888888899999999999999999999865443222111110                              


Q ss_pred             ------CCCCCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          52 ------NPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        52 ------~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                            ...+..+....+.++++++.+||..+|++||++.++++|+||.....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  295 (308)
T cd06615         243 LDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAEL  295 (308)
T ss_pred             HHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhccc
Confidence                  00011111123567889999999999999999999999999987533

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0671|consensus

Probab=99.81  E-value=3.2e-21  Score=115.98  Aligned_cols=96  Identities=25%  Similarity=0.425  Sum_probs=73.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH---HHhhccCCCCCC----------------------
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMR---ALFQIPRNPPPQ----------------------   56 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~----------------------   56 (108)
                      +|.|||++.+.+++.++||||+||+++++.+|...|++.+..+   ...++....+..                      
T Consensus       274 HYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~  353 (415)
T KOG0671|consen  274 HYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVS  353 (415)
T ss_pred             ccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccc
Confidence            6999999999999999999999999999999999998765333   222222111000                      


Q ss_pred             --------------C-----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          57 --------------L-----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        57 --------------~-----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                                    +     .......++.+|+++||..||.+|+|+.|++.||||+...
T Consensus       354 ~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  354 SKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             ccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence                          0     0001134678999999999999999999999999998754

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.81  E-value=1.7e-19  Score=106.83  Aligned_cols=93  Identities=24%  Similarity=0.404  Sum_probs=71.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH----HHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMR----ALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.......    ............  ....+..+.+++..||+.
T Consensus       170 ~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~  247 (267)
T PHA03390        170 LDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPF--IKNVSKNANDFVQSMLKY  247 (267)
T ss_pred             CcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCc--ccccCHHHHHHHHHHhcc
Confidence            36899999988889999999999999999999999997543221    122222221111  124578899999999999


Q ss_pred             CCCCCCC-HHHHhcCccccc
Q psy2811          77 DLEERPF-AKELLRHPLLKK   95 (108)
Q Consensus        77 ~p~~R~~-~~~~l~~~~~~~   95 (108)
                      +|.+|++ ++++++|+||+.
T Consensus       248 ~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        248 NINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             ChhhCCchHHHHhcCCcccC
Confidence            9999996 699999999963

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.81  E-value=1.6e-19  Score=108.38  Aligned_cols=98  Identities=19%  Similarity=0.248  Sum_probs=71.9

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CC------------------CCCC--
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NP------------------PPQL--   57 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~------------------~~~~--   57 (108)
                      .|++||.+.+ ..++.++|+||+|++++++++|..||...+..+....+..   .+                  .+..  
T Consensus       169 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (301)
T cd07873         169 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRA  248 (301)
T ss_pred             cccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCcccc
Confidence            5899998865 4467789999999999999999999987665433221110   00                  0000  


Q ss_pred             -----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          58 -----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        58 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                           .....+..+++++.+||+.||.+|+++.++++|+||+..+..
T Consensus       249 ~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~  295 (301)
T cd07873         249 DCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER  295 (301)
T ss_pred             ccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence                 001235678899999999999999999999999999876643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=7.1e-20  Score=112.48  Aligned_cols=95  Identities=25%  Similarity=0.317  Sum_probs=76.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC--CCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP--QLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||...+.......+......  .......+..+.+++.+|+. +|
T Consensus       203 ~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p  281 (364)
T cd05599         203 PDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EA  281 (364)
T ss_pred             ccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CH
Confidence            3699999999888999999999999999999999999888766655554432221  11211346788999999996 89


Q ss_pred             CCCCC---HHHHhcCcccccc
Q psy2811          79 EERPF---AKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~---~~~~l~~~~~~~~   96 (108)
                      .+|++   +.++++|+||++.
T Consensus       282 ~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         282 ERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             hhcCCCCCHHHHhcCCCcCCC
Confidence            99997   9999999999765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.81  E-value=1.6e-19  Score=107.47  Aligned_cols=95  Identities=17%  Similarity=0.126  Sum_probs=72.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.....    ............... ....+.++.+++.+||+.
T Consensus       158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~  236 (277)
T cd05607         158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE-HQNFTEESKDICRLFLAK  236 (277)
T ss_pred             CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc-cccCCHHHHHHHHHHhcc
Confidence            369999999888899999999999999999999999975432    222222222222211 123477889999999999


Q ss_pred             CCCCCCCH----HHHhcCcccccc
Q psy2811          77 DLEERPFA----KELLRHPLLKKG   96 (108)
Q Consensus        77 ~p~~R~~~----~~~l~~~~~~~~   96 (108)
                      +|++|+++    .++++|+||+..
T Consensus       237 ~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         237 KPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             CHhhCCCCccchhhhhcChhhcCC
Confidence            99999998    678899999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.81  E-value=1e-19  Score=112.53  Aligned_cols=96  Identities=21%  Similarity=0.298  Sum_probs=73.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCCCcCCcHHHHHHHHHHh--hc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCVLLCDFVNECL--RK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l--~~   76 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+......++....  .........+.++.+++.+++  ..
T Consensus       212 ~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~  291 (381)
T cd05626         212 PNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAE  291 (381)
T ss_pred             ccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcc
Confidence            36999999998889999999999999999999999998876655444433221  112222234778889998855  45


Q ss_pred             CCCCCCCHHHHhcCcccccc
Q psy2811          77 DLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ++..|+++.++++|+||+..
T Consensus       292 ~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         292 ERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             cccCCCCHHHHhcCcccCCC
Confidence            55669999999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.81  E-value=1.2e-19  Score=109.31  Aligned_cols=98  Identities=19%  Similarity=0.260  Sum_probs=71.9

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CC------------------CCCC--
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NP------------------PPQL--   57 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~------------------~~~~--   57 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+.+..+....+..   .+                  .+..  
T Consensus       169 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (309)
T cd07872         169 WYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKP  248 (309)
T ss_pred             cccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCC
Confidence            5899999865 4578899999999999999999999987654332221110   00                  0000  


Q ss_pred             -----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          58 -----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        58 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                           .....+.++.+++.+||..||.+|+++.++++|+||+.....
T Consensus       249 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~  295 (309)
T cd07872         249 QPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTR  295 (309)
T ss_pred             CchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccc
Confidence                 001235678899999999999999999999999999876544

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.81  E-value=2.8e-19  Score=105.26  Aligned_cols=95  Identities=37%  Similarity=0.569  Sum_probs=75.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH---PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||....   ..+....+.............+..+.+++..||..+|
T Consensus       165 ~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  244 (264)
T cd06623         165 TYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDP  244 (264)
T ss_pred             cccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCh
Confidence            5899999988888889999999999999999999997763   3334444443333333322256789999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      ++||++.++++|+|++..
T Consensus       245 ~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         245 KKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             hhCCCHHHHHhCHHHHhc
Confidence            999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.80  E-value=1.1e-19  Score=112.12  Aligned_cols=96  Identities=21%  Similarity=0.237  Sum_probs=75.6

Q ss_pred             CccccccccccC----CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC--CCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDM----SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--PQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~----~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+.    .++.++|+||+|+++|++++|..||.+.+.......+.....  ........+.++.+++++||
T Consensus       207 ~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  286 (370)
T cd05596         207 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFL  286 (370)
T ss_pred             cCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHc
Confidence            469999998653    367899999999999999999999998876665555544322  11222234788999999999


Q ss_pred             hcCCCC--CCCHHHHhcCcccccc
Q psy2811          75 RKDLEE--RPFAKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~~--R~~~~~~l~~~~~~~~   96 (108)
                      ..+|.+  |+++.++++|+||+..
T Consensus       287 ~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         287 TDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             cChhhccCCCCHHHHhcCcccCCC
Confidence            988887  9999999999999763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.80  E-value=2.6e-19  Score=109.75  Aligned_cols=97  Identities=23%  Similarity=0.335  Sum_probs=70.4

Q ss_pred             ccccccccccC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHhhccCCCCCCCCCcCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQLDM-----SYDARCDIWSLGITAIELAEGDPPLSDLHP---MRALFQIPRNPPPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~~~-----~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   73 (108)
                      .|+|||.+...     ..+.++||||+|+++|++++|..||.....   ......+........ ....+.++.+++.+|
T Consensus       233 ~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~  311 (353)
T PLN00034        233 AYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEA-PATASREFRHFISCC  311 (353)
T ss_pred             cccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCC-CCccCHHHHHHHHHH
Confidence            69999987432     234589999999999999999999974322   112222222222211 224577899999999


Q ss_pred             hhcCCCCCCCHHHHhcCccccccccc
Q psy2811          74 LRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      |..+|++||++.++++|+||.+....
T Consensus       312 l~~~P~~Rpt~~ell~hp~~~~~~~~  337 (353)
T PLN00034        312 LQREPAKRWSAMQLLQHPFILRAQPG  337 (353)
T ss_pred             ccCChhhCcCHHHHhcCcccccCCcc
Confidence            99999999999999999999876433

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.80  E-value=1.4e-19  Score=109.31  Aligned_cols=93  Identities=20%  Similarity=0.196  Sum_probs=64.9

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHhhc---cCCC--------------
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPM---------RALFQI---PRNP--------------   53 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---------~~~~~~---~~~~--------------   53 (108)
                      +.|+|||++.+ ..++.++|+||+|++++++++|.+||.+....         ..+.++   ...+              
T Consensus       179 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (317)
T cd07868         179 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH  258 (317)
T ss_pred             ccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccch
Confidence            35999999877 45788999999999999999999999643210         111100   0000              


Q ss_pred             -----------CCC--------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          54 -----------PPQ--------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        54 -----------~~~--------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                                 ...        .........+.+++++||..||.+|+|++|+++||||
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         259 STLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                       000        0000113457799999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1.3e-19  Score=108.15  Aligned_cols=94  Identities=20%  Similarity=0.228  Sum_probs=73.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH----HhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRA----LFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|++||.+.+..++.++|+||+|+++|++++|..||.+.+....    ...+.......  +...+..+.+++.+||..
T Consensus       165 ~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~  242 (285)
T cd05605         165 VGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEY--SEKFSEAARSICRQLLTK  242 (285)
T ss_pred             CCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccccc--CcccCHHHHHHHHHHccC
Confidence            369999999888889999999999999999999999987654222    12222211111  123567889999999999


Q ss_pred             CCCCCC-----CHHHHhcCcccccc
Q psy2811          77 DLEERP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        77 ~p~~R~-----~~~~~l~~~~~~~~   96 (108)
                      ||.+|+     +++++++|+||...
T Consensus       243 ~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         243 DPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             CHHHhcCCCCCCHHHHhcCcCccCC
Confidence            999999     89999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.80  E-value=2.8e-19  Score=105.18  Aligned_cols=95  Identities=26%  Similarity=0.254  Sum_probs=77.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||...+...+.++|+|++|++++++++|..||...........+.............+..+.+++..||+.+|++|
T Consensus       166 ~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  245 (265)
T cd05579         166 DYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKR  245 (265)
T ss_pred             cccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhc
Confidence            58999998887788899999999999999999999987776665555544333332221236788999999999999999


Q ss_pred             CCH---HHHhcCcccccc
Q psy2811          82 PFA---KELLRHPLLKKG   96 (108)
Q Consensus        82 ~~~---~~~l~~~~~~~~   96 (108)
                      |++   .++++|+||++.
T Consensus       246 pt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         246 LGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             CCCccHHHHhcCccccCC
Confidence            999   999999999854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.80  E-value=3e-19  Score=106.65  Aligned_cols=99  Identities=30%  Similarity=0.485  Sum_probs=73.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHhhccCCCCCCCCC-----cCCcHHHHHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH-----PMRALFQIPRNPPPQLTK-----RFDCVLLCDFVN   71 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~   71 (108)
                      .|++||.+.+..++.++|+|++|+++|++++|..||....     ..+....+.....+....     ...+..+.+++.
T Consensus       168 ~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  247 (287)
T cd06621         168 FYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIK  247 (287)
T ss_pred             cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHH
Confidence            5899999988889999999999999999999999987652     122222222211111111     112467889999


Q ss_pred             HHhhcCCCCCCCHHHHhcCcccccccccc
Q psy2811          72 ECLRKDLEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      .||..+|++||++.|+++|+||+......
T Consensus       248 ~~l~~~p~~Rpt~~eil~~~~~~~~~~~~  276 (287)
T cd06621         248 QCLEKDPTRRPTPWDMLEHPWIKAQMKKK  276 (287)
T ss_pred             HHcCCCcccCCCHHHHHhCccccccccch
Confidence            99999999999999999999997665543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.80  E-value=1.7e-20  Score=113.50  Aligned_cols=94  Identities=17%  Similarity=0.241  Sum_probs=77.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|++||.+.+..++.++|+||+|+++|++++|..||...........+.......+  ...+..+.+++++||+.||++
T Consensus       162 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~li~~~l~~~P~~  239 (318)
T cd05582         162 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP--QFLSPEAQSLLRALFKRNPAN  239 (318)
T ss_pred             hhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhhcCHhH
Confidence            369999999888889999999999999999999999988776666655544433222  245678899999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     +.+++.|+||+..
T Consensus       240 R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         240 RLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             cCCCCCCCHHHHhCCCCcCCC
Confidence            999     7889999999754

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.80  E-value=3.2e-19  Score=105.33  Aligned_cols=92  Identities=28%  Similarity=0.494  Sum_probs=72.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||..........++.........+...+..+.+++.+|+. +|++|
T Consensus       174 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~R  252 (265)
T cd06652         174 YWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLR  252 (265)
T ss_pred             cccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhC
Confidence            59999999888888999999999999999999999987655444444433322222222346678899999985 89999


Q ss_pred             CCHHHHhcCcccc
Q psy2811          82 PFAKELLRHPLLK   94 (108)
Q Consensus        82 ~~~~~~l~~~~~~   94 (108)
                      |+++++++|+|++
T Consensus       253 p~~~~il~~~~~~  265 (265)
T cd06652         253 PSADELLRHTFVH  265 (265)
T ss_pred             CCHHHHhcCcccC
Confidence            9999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.80  E-value=2.1e-19  Score=109.14  Aligned_cols=100  Identities=31%  Similarity=0.482  Sum_probs=72.3

Q ss_pred             ccccccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC------------------------
Q psy2811           2 SVIACEQQLDM--SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP------------------------   55 (108)
Q Consensus         2 ~y~ape~~~~~--~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~------------------------   55 (108)
                      .|++||++.+.  .++.++|+||+|++++++++|..||..................                        
T Consensus       173 ~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (328)
T cd08226         173 PWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDS  252 (328)
T ss_pred             CccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhc
Confidence            48999998763  4678999999999999999999999765433322221111000                        


Q ss_pred             ---------------------CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccccch
Q psy2811          56 ---------------------QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        56 ---------------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~  101 (108)
                                           .......+..+.+++++||..||.+|||+.++++|+||+.......
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~~~  319 (328)
T cd08226         253 GIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQTQ  319 (328)
T ss_pred             ccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHhcc
Confidence                                 0000012456889999999999999999999999999987765543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.80  E-value=3e-19  Score=107.65  Aligned_cols=97  Identities=38%  Similarity=0.655  Sum_probs=75.2

Q ss_pred             ccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|+|||.+.   ...++.++|+||+|++++++++|..||...+.......+.....+.......+..+.+++++||..+|
T Consensus       176 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P  255 (308)
T cd06634         176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIP  255 (308)
T ss_pred             cccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCc
Confidence            589999974   34567799999999999999999999877655444444433333332233456788999999999999


Q ss_pred             CCCCCHHHHhcCcccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .+||++.++++|+|+.....
T Consensus       256 ~~Rp~~~~ll~~~~~~~~~~  275 (308)
T cd06634         256 QDRPTSEVLLKHRFVLRERP  275 (308)
T ss_pred             ccCCCHHHHhhCccccccCC
Confidence            99999999999999977544

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0604|consensus

Probab=99.80  E-value=5e-20  Score=108.63  Aligned_cols=101  Identities=23%  Similarity=0.296  Sum_probs=82.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCCCCCc--CCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQLTKR--FDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~l   74 (108)
                      |.|.|||++..+.|+..+|+||+|+++|.++.|.+||.....    .....+|..+...++.+.  ..+...+++|+.+|
T Consensus       227 PyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LL  306 (400)
T KOG0604|consen  227 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLL  306 (400)
T ss_pred             ccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHh
Confidence            569999999999999999999999999999999999965432    234455666666555433  34788999999999


Q ss_pred             hcCCCCCCCHHHHhcCcccccccccch
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~~~~~  101 (108)
                      ..+|++|.++++++.|||+......+.
T Consensus       307 kt~PteRlTI~~~m~hpwi~~~~~vp~  333 (400)
T KOG0604|consen  307 KTEPTERLTIEEVMDHPWINQYEAVPQ  333 (400)
T ss_pred             cCCchhheeHHHhhcCchhcccccCCC
Confidence            999999999999999999987765544

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.80  E-value=9.8e-20  Score=110.71  Aligned_cols=94  Identities=22%  Similarity=0.270  Sum_probs=71.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------HHH-HHhhccCCCCCCCCCcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--------PMR-ALFQIPRNPPPQLTKRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||....        ... ....+....... + ...+..+.++++
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~-p-~~~~~~~~~ll~  237 (329)
T cd05618         160 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI-P-RSLSVKAASVLK  237 (329)
T ss_pred             ccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCC-C-CCCCHHHHHHHH
Confidence            36999999999999999999999999999999999995211        111 122222222221 2 245678889999


Q ss_pred             HHhhcCCCCCCC------HHHHhcCcccccc
Q psy2811          72 ECLRKDLEERPF------AKELLRHPLLKKG   96 (108)
Q Consensus        72 ~~l~~~p~~R~~------~~~~l~~~~~~~~   96 (108)
                      +||+.||++|++      +.++++||||+..
T Consensus       238 ~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         238 SFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             HHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            999999999998      5899999999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.80  E-value=2e-19  Score=106.95  Aligned_cols=98  Identities=40%  Similarity=0.636  Sum_probs=73.9

Q ss_pred             cccccccccc----CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQLD----MSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~~----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      .|++||.+.+    ..++.++|+|++|++++++++|..||.... ..+....+.............+.++.+++.+||..
T Consensus       168 ~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  247 (283)
T cd06617         168 PYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKK  247 (283)
T ss_pred             cccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccC
Confidence            5899998764    446778999999999999999999986532 22333333333222222223467889999999999


Q ss_pred             CCCCCCCHHHHhcCccccccccc
Q psy2811          77 DLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      +|.+||++.+++.|+||......
T Consensus       248 ~p~~Rp~~~~il~~~~~~~~~~~  270 (283)
T cd06617         248 NYKERPNYPELLQHPFFELHLSK  270 (283)
T ss_pred             ChhhCcCHHHHhcCchhhhcccc
Confidence            99999999999999999887644

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=2.5e-19  Score=105.51  Aligned_cols=95  Identities=27%  Similarity=0.303  Sum_probs=74.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC--CCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL--TKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...+.......+........  .....+..+.+++.+||..+|+
T Consensus       158 ~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  237 (260)
T cd05611         158 DYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPA  237 (260)
T ss_pred             CccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHH
Confidence            58999999887788899999999999999999999987766555444433222111  1113467889999999999999


Q ss_pred             CCC---CHHHHhcCcccccc
Q psy2811          80 ERP---FAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~---~~~~~l~~~~~~~~   96 (108)
                      +|+   ++.|++.||||++.
T Consensus       238 ~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         238 KRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             HccCCCcHHHHHcChHhhcC
Confidence            999   45799999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.80  E-value=2.8e-19  Score=106.45  Aligned_cols=92  Identities=27%  Similarity=0.280  Sum_probs=67.8

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC--------------------CCCC--
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--------------------PQLT--   58 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~--------------------~~~~--   58 (108)
                      .|++||.+.+.. ++.++|+||+|++++++++|..||.+.+......++.....                    +...  
T Consensus       165 ~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd07860         165 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQ  244 (284)
T ss_pred             cccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccccccc
Confidence            589999887644 57789999999999999999999987654433222111000                    0000  


Q ss_pred             -----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 -----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                           ....+..+.+++.+||..||++||+++++++||||
T Consensus       245 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         245 DFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             CHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence                 01235677899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.80  E-value=4.1e-19  Score=105.15  Aligned_cols=92  Identities=33%  Similarity=0.567  Sum_probs=69.8

Q ss_pred             ccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC-CCCC---cCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLDMS--YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP-QLTK---RFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~~~--~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+....  ++.++|+||+|++++++++|..||...........+...... ....   ...+..+.+++..||.
T Consensus       175 ~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  254 (272)
T cd06629         175 FWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFT  254 (272)
T ss_pred             cccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhc
Confidence            589999987654  788999999999999999999999766554433332222111 1111   1236789999999999


Q ss_pred             cCCCCCCCHHHHhcCccc
Q psy2811          76 KDLEERPFAKELLRHPLL   93 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~   93 (108)
                      .+|.+||++.++++|||+
T Consensus       255 ~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         255 INPDNRPTARELLQHPFI  272 (272)
T ss_pred             CChhhCCCHHHHhhCCCC
Confidence            999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=2e-20  Score=113.70  Aligned_cols=95  Identities=24%  Similarity=0.261  Sum_probs=76.7

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+. .++.++|+||+|+++|+|++|..||.+.+..+....+..+...... ...+..+.+++++||..+|.
T Consensus       160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li~~~L~~~P~  238 (330)
T cd05586         160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK-NVLSDEGRQFVKGLLNRNPQ  238 (330)
T ss_pred             ccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC-ccCCHHHHHHHHHHcCCCHH
Confidence            369999998764 4788999999999999999999999887766655555544433322 23467889999999999999


Q ss_pred             CCC----CHHHHhcCcccccc
Q psy2811          80 ERP----FAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~----~~~~~l~~~~~~~~   96 (108)
                      +|+    ++.++++|+||...
T Consensus       239 ~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         239 HRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             HCCCCCCCHHHHhcCccccCC
Confidence            998    68999999999764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.80  E-value=1.1e-19  Score=110.41  Aligned_cols=94  Identities=29%  Similarity=0.332  Sum_probs=71.5

Q ss_pred             CccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCC----HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhh
Q psy2811           1 MSVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLH----PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         1 ~~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   75 (108)
                      +.|+|||.+.+.. ++.++|+||+|++++++++|..||....    .......+.......  +...+..+.+++.+||.
T Consensus       170 ~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~  247 (332)
T cd05614         170 IEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF--PSFIGPEAQDLLHKLLR  247 (332)
T ss_pred             ccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHcC
Confidence            3699999987654 6788999999999999999999996432    122222333322222  12457788999999999


Q ss_pred             cCCCCCC-----CHHHHhcCcccccc
Q psy2811          76 KDLEERP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        76 ~~p~~R~-----~~~~~l~~~~~~~~   96 (108)
                      .||++|+     ++.++++|+||++.
T Consensus       248 ~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         248 KDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             CCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            9999999     78899999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.80  E-value=4.9e-19  Score=106.12  Aligned_cols=99  Identities=35%  Similarity=0.567  Sum_probs=76.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||.+.........+........ .....+..+.+++.+||..+|.+
T Consensus       181 ~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~  260 (292)
T cd06657         181 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQ  260 (292)
T ss_pred             cccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCccc
Confidence            58999998887888899999999999999999999987665443333322222111 11134677889999999999999


Q ss_pred             CCCHHHHhcCcccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~~  100 (108)
                      ||++.+++.|+||......+
T Consensus       261 R~~~~~ll~~~~~~~~~~~~  280 (292)
T cd06657         261 RATAAELLKHPFLAKAGPPS  280 (292)
T ss_pred             CcCHHHHhcChHHhccCCCc
Confidence            99999999999998876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.80  E-value=1.9e-19  Score=109.24  Aligned_cols=100  Identities=25%  Similarity=0.202  Sum_probs=74.5

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC---CC--------------------C-
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP---PP--------------------Q-   56 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~---~~--------------------~-   56 (108)
                      .|++||.+.+. .++.++|+||+|++++++++|..||.+.+..+....+....   ..                    . 
T Consensus       171 ~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (330)
T cd07834         171 WYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKP  250 (330)
T ss_pred             CcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCC
Confidence            48999999887 78889999999999999999999998766543332221100   00                    0 


Q ss_pred             ---C--CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccccch
Q psy2811          57 ---L--TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        57 ---~--~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~  101 (108)
                         .  .....+..+.+++.+||..+|.+||++++++.|+||+.......
T Consensus       251 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~  300 (330)
T cd07834         251 KKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPED  300 (330)
T ss_pred             cchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccccc
Confidence               0  00113567889999999999999999999999999987655433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.80  E-value=9e-20  Score=113.13  Aligned_cols=100  Identities=22%  Similarity=0.215  Sum_probs=69.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHhhc------------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH-------PMRALFQI------------------------   49 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-------~~~~~~~~------------------------   49 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..|+-...       ....+..+                        
T Consensus       247 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~  326 (391)
T PHA03212        247 IATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI  326 (391)
T ss_pred             cCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence            46899999998889999999999999999999987653321       00001000                        


Q ss_pred             --cCCCCCCCC-C------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccccc
Q psy2811          50 --PRNPPPQLT-K------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        50 --~~~~~~~~~-~------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                        ......... .      ...+.++.+++.+||..||.+||++.++++|+||+......
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~~  386 (391)
T PHA03212        327 GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDPY  386 (391)
T ss_pred             HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCCC
Confidence              000000000 0      01245688999999999999999999999999998765443

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.80  E-value=1.8e-19  Score=109.95  Aligned_cols=96  Identities=29%  Similarity=0.379  Sum_probs=70.1

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C-------------------CCCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P-------------------PPQLT   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~-------------------~~~~~   58 (108)
                      .|+|||++.+ ..++.++|+||+|++++++++|..||.+.+..+.+.++...   .                   .+...
T Consensus       180 ~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (343)
T cd07878         180 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMP  259 (343)
T ss_pred             cccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhcccccc
Confidence            5899999876 56788999999999999999999999776543332221100   0                   00000


Q ss_pred             C-------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          59 K-------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        59 ~-------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .       ......+.+++.+||..||.+|+++.+++.||||....
T Consensus       260 ~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         260 QQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             chhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence            0       01234577999999999999999999999999997643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.80  E-value=2.2e-19  Score=109.99  Aligned_cols=93  Identities=24%  Similarity=0.334  Sum_probs=69.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC----------------------CCCC---
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN----------------------PPPQ---   56 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~----------------------~~~~---   56 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...+......++...                      ....   
T Consensus       182 ~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
T cd07850         182 YYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGY  261 (353)
T ss_pred             cccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCc
Confidence            589999999999999999999999999999999999766543322211100                      0000   


Q ss_pred             -----------CC-----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccc
Q psy2811          57 -----------LT-----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLK   94 (108)
Q Consensus        57 -----------~~-----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   94 (108)
                                 ..     ....+..+.+++.+||+.||++||++.+++.|+|++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         262 SFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             chhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence                       00     001245678999999999999999999999999886

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.80  E-value=1.1e-19  Score=112.27  Aligned_cols=94  Identities=24%  Similarity=0.351  Sum_probs=73.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||++.+..++.++|+||+|+++|+|++|..||.+.+......++....  ...+.....+.+..+++.+++ .+|.
T Consensus       213 ~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~  291 (382)
T cd05625         213 NYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPE  291 (382)
T ss_pred             ccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHh
Confidence            5999999999999999999999999999999999998877655444443322  111222234678889998875 5999


Q ss_pred             CCCC---HHHHhcCcccccc
Q psy2811          80 ERPF---AKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~---~~~~l~~~~~~~~   96 (108)
                      +|++   +.++++||||+..
T Consensus       292 ~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         292 DRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             HcCCCCCHHHHhcCCCcCCc
Confidence            9987   9999999999764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.80  E-value=5.4e-20  Score=111.60  Aligned_cols=94  Identities=24%  Similarity=0.264  Sum_probs=77.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|+++++|++|..||...+..+....+........+  ..+..+.+++++|+..+|.+
T Consensus       160 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~ll~~~p~~  237 (325)
T cd05604         160 PEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP--GASLTAWSILEELLEKDRQR  237 (325)
T ss_pred             hhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCC--CCCHHHHHHHHHHhccCHHh
Confidence            3699999999988999999999999999999999999887766665555544332222  35677889999999999999


Q ss_pred             CCCH----HHHhcCcccccc
Q psy2811          81 RPFA----KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~----~~~l~~~~~~~~   96 (108)
                      |+++    .+++.|+||...
T Consensus       238 R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         238 RLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             cCCCCCCHHHHhcCCCcCCC
Confidence            9975    589999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.80  E-value=4e-19  Score=105.77  Aligned_cols=92  Identities=28%  Similarity=0.293  Sum_probs=67.5

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C----------------------CC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P----------------------PP   55 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~----------------------~~   55 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+.........+...   .                      ..
T Consensus       166 ~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (285)
T cd07861         166 WYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKG  245 (285)
T ss_pred             cccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcc
Confidence            5899998865 44688999999999999999999999876543322111000   0                      00


Q ss_pred             C--CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          56 Q--LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        56 ~--~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                      .  ......+.++.+++++||..||.+||++.+++.|+||
T Consensus       246 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         246 SLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             hhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence            0  0011235678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=1e-19  Score=112.34  Aligned_cols=94  Identities=26%  Similarity=0.300  Sum_probs=73.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||++.+..++.++|+||+|+++|++++|..||......+....+....  ...+.....+.++.+++.+||. +|.
T Consensus       213 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~  291 (377)
T cd05629         213 DYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAE  291 (377)
T ss_pred             cccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHh
Confidence            5999999998899999999999999999999999998877655555544321  1111222346789999999997 677


Q ss_pred             CC---CCHHHHhcCcccccc
Q psy2811          80 ER---PFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R---~~~~~~l~~~~~~~~   96 (108)
                      +|   +++.+++.|+||++.
T Consensus       292 ~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         292 NRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             hcCCCCCHHHHhcCCCcCCC
Confidence            65   599999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.80  E-value=4.7e-19  Score=103.40  Aligned_cols=91  Identities=51%  Similarity=0.805  Sum_probs=70.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcC-CcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRF-DCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||.................+...... .+..+.+++.+||..+|++
T Consensus       162 ~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  241 (253)
T cd05122         162 YWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEK  241 (253)
T ss_pred             cccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhh
Confidence            589999998888888999999999999999999999876443333332222222222111 2678899999999999999


Q ss_pred             CCCHHHHhcCcc
Q psy2811          81 RPFAKELLRHPL   92 (108)
Q Consensus        81 R~~~~~~l~~~~   92 (108)
                      ||++.+++.|||
T Consensus       242 R~t~~~~l~~~~  253 (253)
T cd05122         242 RPTAEQLLKHPF  253 (253)
T ss_pred             CCCHHHHhcCCC
Confidence            999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0580|consensus

Probab=99.80  E-value=2.8e-19  Score=102.37  Aligned_cols=94  Identities=21%  Similarity=0.247  Sum_probs=84.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|.+||.+.+..++..+|+|++|++.|+++.|.+||......++..+|.......+  ...+.+++++|.+|+..+|.+
T Consensus       186 ~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~  263 (281)
T KOG0580|consen  186 LDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIE  263 (281)
T ss_pred             cccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC--cccChhHHHHHHHHhccCccc
Confidence            369999999999999999999999999999999999999887778888776655444  367889999999999999999


Q ss_pred             CCCHHHHhcCcccccc
Q psy2811          81 RPFAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~   96 (108)
                      |....|++.|||+...
T Consensus       264 r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  264 RLALTEVMDHPWIVAN  279 (281)
T ss_pred             cccHHHHhhhHHHHhc
Confidence            9999999999999764

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.79  E-value=6.2e-19  Score=105.67  Aligned_cols=100  Identities=35%  Similarity=0.597  Sum_probs=74.6

Q ss_pred             ccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhccCCCCCCCCC-cCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLDMS----YDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTK-RFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~~~----~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~   75 (108)
                      .|+|||.+.+..    ++.++|+||+|++++++++|..||..... .+...++.......... ...+.++.+++.+||.
T Consensus       179 ~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  258 (296)
T cd06618         179 AYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLT  258 (296)
T ss_pred             cccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            589999987543    67899999999999999999999976432 23333333332222221 1246788999999999


Q ss_pred             cCCCCCCCHHHHhcCcccccccccch
Q psy2811          76 KDLEERPFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~~~~~~  101 (108)
                      .+|.+||++.++++|+|+........
T Consensus       259 ~~p~~Rp~~~~il~~~~~~~~~~~~~  284 (296)
T cd06618         259 KDHRKRPKYRELLQHPFIRRYETAEV  284 (296)
T ss_pred             CChhhCCCHHHHhcChhhhccchhHH
Confidence            99999999999999999987655443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.79  E-value=6.2e-19  Score=103.85  Aligned_cols=93  Identities=31%  Similarity=0.515  Sum_probs=70.5

Q ss_pred             CccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCC-cCCcHHHHHHHHHHhh
Q psy2811           1 MSVIACEQQLDMS---YDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTK-RFDCVLLCDFVNECLR   75 (108)
Q Consensus         1 ~~y~ape~~~~~~---~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~   75 (108)
                      +.|++||.+.+..   ++.++|+|++|++++++++|..||.... .......+.....+..+. ...+..+.+++++||+
T Consensus       167 ~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  246 (264)
T cd06626         167 PAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLE  246 (264)
T ss_pred             cCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHcc
Confidence            3689999987765   7789999999999999999999997653 233333333322222221 1226778899999999


Q ss_pred             cCCCCCCCHHHHhcCccc
Q psy2811          76 KDLEERPFAKELLRHPLL   93 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~   93 (108)
                      .+|.+||++.+++.|+|+
T Consensus       247 ~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         247 SDPKKRPTASELLQHPFV  264 (264)
T ss_pred             CCcccCCCHHHHhcCCCC
Confidence            999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.79  E-value=7.2e-19  Score=106.05  Aligned_cols=97  Identities=33%  Similarity=0.526  Sum_probs=70.0

Q ss_pred             cccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC------------------------
Q psy2811           2 SVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP------------------------   55 (108)
Q Consensus         2 ~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~------------------------   55 (108)
                      .|+|||.+.+  ..++.++|+||+|++++++++|..||..............+...                        
T Consensus       173 ~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (314)
T cd08216         173 PWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEH  252 (314)
T ss_pred             cccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccc
Confidence            5899999866  35788999999999999999999999865433221111100000                        


Q ss_pred             --------CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          56 --------QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        56 --------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                              .......+..+.+++..||+.+|++||++.++++||||+....
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~  303 (314)
T cd08216         253 PNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKR  303 (314)
T ss_pred             cchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcc
Confidence                    0000011356788999999999999999999999999987753

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0574|consensus

Probab=99.79  E-value=2.2e-20  Score=110.71  Aligned_cols=100  Identities=45%  Similarity=0.730  Sum_probs=85.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |-|||||++..-+|+.+.||||+|+...+|..|++|+....++..+..|...+++.. .+..-+.++.+|++.||...|+
T Consensus       193 PFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE  272 (502)
T KOG0574|consen  193 PFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPE  272 (502)
T ss_pred             cccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHH
Confidence            459999999999999999999999999999999999998888777777666554433 2333478899999999999999


Q ss_pred             CCCCHHHHhcCcccccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      +|.++.++++|+|++++....
T Consensus       273 ~R~TA~~L~~H~FiknA~g~~  293 (502)
T KOG0574|consen  273 ERKTALRLCEHTFIKNAPGCD  293 (502)
T ss_pred             HHHHHHHHhhhhhhcCCCccc
Confidence            999999999999999886554

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.79  E-value=2.5e-19  Score=111.19  Aligned_cols=97  Identities=27%  Similarity=0.309  Sum_probs=70.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHhhc----cCCC--------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM---RALFQI----PRNP--------------------   53 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---~~~~~~----~~~~--------------------   53 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+....   ..+..+    ...+                    
T Consensus       251 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (392)
T PHA03207        251 LETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAI  330 (392)
T ss_pred             cCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcc
Confidence            3699999999889999999999999999999999998654321   111110    0000                    


Q ss_pred             ---CCCC-----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          54 ---PPQL-----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        54 ---~~~~-----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                         .+..     .....+.++.+++.+||..||++||++.++++||||....
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        331 VLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             cccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence               0000     0011245678899999999999999999999999997653

>KOG0593|consensus

Probab=99.79  E-value=2.5e-19  Score=105.80  Aligned_cols=94  Identities=27%  Similarity=0.471  Sum_probs=73.0

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC--------------CC-------CCCC-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN--------------PP-------PQLT-   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~--------------~~-------~~~~-   58 (108)
                      .|.|||.+.| ..|+.++|||++||++.+|++|.+.|.+....+++..|...              .+       +.+. 
T Consensus       166 WYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~  245 (396)
T KOG0593|consen  166 WYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEH  245 (396)
T ss_pred             hccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCC
Confidence            4899999887 78999999999999999999999999998877665544211              00       0000 


Q ss_pred             --C-----cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          59 --K-----RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        59 --~-----~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                        +     ...+.-..+|+++||..||.+|++.++++.|++|++
T Consensus       246 ~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  246 PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             ccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence              0     011345669999999999999999999999999954

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.79  E-value=2.6e-19  Score=106.95  Aligned_cols=94  Identities=22%  Similarity=0.249  Sum_probs=72.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP---MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||.....   .+............ .....+.++.+++..||+.||
T Consensus       166 ~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p  244 (285)
T cd05630         166 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEE-YSEKFSPDARSLCKMLLCKDP  244 (285)
T ss_pred             cccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhh-cCccCCHHHHHHHHHHhhcCH
Confidence            69999999988899999999999999999999999976432   11222221111111 112346778899999999999


Q ss_pred             CCCCC-----HHHHhcCcccccc
Q psy2811          79 EERPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~-----~~~~l~~~~~~~~   96 (108)
                      .+|++     +.++++|+||+..
T Consensus       245 ~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         245 KERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             HHccCCCCCchHHHHcChhhhcc
Confidence            99999     8999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.79  E-value=5.7e-19  Score=103.46  Aligned_cols=91  Identities=26%  Similarity=0.419  Sum_probs=75.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||...+..++.++|+|++|++++++++|..||...........+........+. ..+..+.+++..||..+|++|
T Consensus       168 ~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~l~~~p~~R  246 (258)
T cd08215         168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPS-QYSSELRNLVSSLLQKDPEER  246 (258)
T ss_pred             cccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHHcCCChhhC
Confidence            5899999888888899999999999999999999998776655555544443333332 456789999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.+++.||||
T Consensus       247 p~~~~ll~~~~~  258 (258)
T cd08215         247 PSIAQILQSPFI  258 (258)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0589|consensus

Probab=99.79  E-value=2.1e-19  Score=110.77  Aligned_cols=95  Identities=31%  Similarity=0.412  Sum_probs=84.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |.|+.||.+.+..|+.++|+||+||++|++.+-+++|...+......++......+.+ ...+.+++.+++.|+..+|..
T Consensus       170 p~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp-~~ys~el~~lv~~~l~~~P~~  248 (426)
T KOG0589|consen  170 PYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP-SMYSSELRSLVKSMLRKNPEH  248 (426)
T ss_pred             CcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC-ccccHHHHHHHHHHhhcCCcc
Confidence            5799999999999999999999999999999999999999988888888777644444 366889999999999999999


Q ss_pred             CCCHHHHhcCcccccc
Q psy2811          81 RPFAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~   96 (108)
                      ||++.++|.+|.+..-
T Consensus       249 RPsa~~LL~~P~l~~~  264 (426)
T KOG0589|consen  249 RPSALELLRRPHLLRY  264 (426)
T ss_pred             CCCHHHHhhChhhhhH
Confidence            9999999999877643

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.79  E-value=1.5e-19  Score=109.53  Aligned_cols=94  Identities=26%  Similarity=0.275  Sum_probs=76.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|+++|++++|..||...+.......+.........  ..+..+.+++.+||+.+|.+
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~li~~~l~~~p~~  237 (321)
T cd05603         160 PEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPG--GKTVAACDLLVGLLHKDQRR  237 (321)
T ss_pred             cccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCC--CCCHHHHHHHHHHccCCHhh
Confidence            3699999999888999999999999999999999999888766655555554333222  45678889999999999999


Q ss_pred             CCCH----HHHhcCcccccc
Q psy2811          81 RPFA----KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~----~~~l~~~~~~~~   96 (108)
                      |++.    .++++|+||...
T Consensus       238 R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         238 RLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             cCCCCCCHHHHhCCCCcCCC
Confidence            9864    589999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.79  E-value=6.5e-19  Score=103.42  Aligned_cols=92  Identities=37%  Similarity=0.559  Sum_probs=71.7

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.... ++.++|+|++|++++++++|..||...........+.........+...+..+.+++++||..+|.+
T Consensus       166 ~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  245 (258)
T cd06632         166 YWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSL  245 (258)
T ss_pred             ceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCccc
Confidence            589999987766 7889999999999999999999997766544444433311111112234678889999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      ||++.+++.|||+
T Consensus       246 Rp~~~~~l~~~~~  258 (258)
T cd06632         246 RPTAAELLEHPFV  258 (258)
T ss_pred             CcCHHHHhcCCCC
Confidence            9999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.79  E-value=6.3e-19  Score=106.08  Aligned_cols=95  Identities=23%  Similarity=0.188  Sum_probs=75.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||.+....+....+.......+. ....+.++.+++.+||..+|++
T Consensus       181 ~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  260 (305)
T cd05609         181 EYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLE  260 (305)
T ss_pred             cccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhh
Confidence            589999998888899999999999999999999999877665555544433222211 1134677899999999999999


Q ss_pred             CCC---HHHHhcCcccccc
Q psy2811          81 RPF---AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~---~~~~l~~~~~~~~   96 (108)
                      ||+   +.++++|+||...
T Consensus       261 R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         261 RLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             ccCccCHHHHHhCccccCC
Confidence            997   7899999999543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.79  E-value=7e-19  Score=106.43  Aligned_cols=98  Identities=39%  Similarity=0.641  Sum_probs=76.9

Q ss_pred             ccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|++||.+.   ...++.++|+||+|++++++++|..||...........+.............+..+.+++.+||+.+|
T Consensus       186 ~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p  265 (317)
T cd06635         186 YWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIP  265 (317)
T ss_pred             cccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCc
Confidence            589999974   35578899999999999999999999887765555555444433333333456788999999999999


Q ss_pred             CCCCCHHHHhcCccccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      .+||++.++++|+|+......
T Consensus       266 ~~Rpt~~~il~~~~~~~~~~~  286 (317)
T cd06635         266 QDRPTSEELLKHMFVLRERPE  286 (317)
T ss_pred             ccCcCHHHHHhChhhhccCcc
Confidence            999999999999998665543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.79  E-value=2.9e-19  Score=119.51  Aligned_cols=96  Identities=24%  Similarity=0.324  Sum_probs=74.2

Q ss_pred             Ccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+  ..++.++||||||+++|+|++|..||...+....+.......+.. +....+.++.+||..||..+|
T Consensus       205 p~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~l-pi~~~S~eL~dLI~~~L~~dP  283 (1021)
T PTZ00266        205 PYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDL-PIKGKSKELNILIKNLLNLSA  283 (1021)
T ss_pred             ccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC-CcCCCCHHHHHHHHHHhcCCh
Confidence            46999999865  447889999999999999999999998765444333322222222 222346789999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+||++.+++.|+|++...
T Consensus       284 eeRPSa~QlL~h~~ik~i~  302 (1021)
T PTZ00266        284 KERPSALQCLGYQIIKNVG  302 (1021)
T ss_pred             hHCcCHHHHhccHHHhhcC
Confidence            9999999999999997553

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.79  E-value=4.4e-19  Score=105.39  Aligned_cols=92  Identities=25%  Similarity=0.278  Sum_probs=67.6

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CC---------------CCCCC----
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NP---------------PPQLT----   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~---------------~~~~~----   58 (108)
                      .|++||.+.. ..++.++|+||+|++++++++|..||.+.+..+....+..   ..               .....    
T Consensus       163 ~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (282)
T cd07831         163 WYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGT  242 (282)
T ss_pred             ccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccc
Confidence            5899998654 4467789999999999999999999987654332221110   00               00000    


Q ss_pred             -----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 -----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                           ....+..+.+++.+||..+|++||++.++++|+||
T Consensus       243 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         243 GLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             cHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence                 01235788999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.79  E-value=4.3e-19  Score=105.61  Aligned_cols=88  Identities=18%  Similarity=0.216  Sum_probs=71.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+....+....+........ +...+.++.+++..||..+|.+
T Consensus       191 ~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~l~~~c~~~~p~~  269 (283)
T cd05048         191 RWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPC-PEDCPARVYALMIECWNEIPAR  269 (283)
T ss_pred             cccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC-cccCCHHHHHHHHHHccCChhh
Confidence            5999999988889999999999999999997 9999988776665555544433322 2345788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       270 Rp~~~~i~~~  279 (283)
T cd05048         270 RPRFKDIHTR  279 (283)
T ss_pred             CcCHHHHHHH
Confidence            9999999853

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0660|consensus

Probab=99.79  E-value=3e-19  Score=106.77  Aligned_cols=95  Identities=27%  Similarity=0.293  Sum_probs=72.6

Q ss_pred             ccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC-----------------------CCCCCC
Q psy2811           2 SVIACEQQL-DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR-----------------------NPPPQL   57 (108)
Q Consensus         2 ~y~ape~~~-~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~~   57 (108)
                      .|.|||++. ...|+.+.||||+||++.+|++|++.|.|.+..+++..+..                       ..+..+
T Consensus       192 WYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p  271 (359)
T KOG0660|consen  192 WYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIP  271 (359)
T ss_pred             eecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCC
Confidence            488999965 47799999999999999999999999988776554433311                       011111


Q ss_pred             CC------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          58 TK------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        58 ~~------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ..      ...++...+++.+||..||.+|+|++|+++|||+..-
T Consensus       272 ~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  272 KQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             CCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence            10      0236778899999999999999999999999999754

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.79  E-value=2.6e-19  Score=108.06  Aligned_cols=92  Identities=20%  Similarity=0.180  Sum_probs=64.2

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHh---hccC-----------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPM---------RALF---QIPR-----------------   51 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---------~~~~---~~~~-----------------   51 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|.+||......         ....   ....                 
T Consensus       180 ~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (317)
T cd07867         180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYP  259 (317)
T ss_pred             cccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccch
Confidence            5999999876 44788999999999999999999998643210         0000   0000                 


Q ss_pred             --------CCCCC--------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          52 --------NPPPQ--------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        52 --------~~~~~--------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                              .....        .........+.+++.+||..||.+|||+.|+++||||
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         260 TLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                    00000        0000123457789999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.79  E-value=2.2e-19  Score=109.08  Aligned_cols=94  Identities=23%  Similarity=0.316  Sum_probs=72.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------HHHH-HhhccCCCCCCCCCcCCcHHHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH------PMRA-LFQIPRNPPPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~   73 (108)
                      +.|+|||.+.+..++.++|+||+|+++|++++|..||....      .... ...+...... .+ ...+..+.+++.+|
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~p-~~~~~~~~~li~~~  237 (327)
T cd05617         160 PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR-IP-RFLSVKASHVLKGF  237 (327)
T ss_pred             cccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC-CC-CCCCHHHHHHHHHH
Confidence            36999999999999999999999999999999999995321      1122 2222222222 22 24567888999999


Q ss_pred             hhcCCCCCCC------HHHHhcCcccccc
Q psy2811          74 LRKDLEERPF------AKELLRHPLLKKG   96 (108)
Q Consensus        74 l~~~p~~R~~------~~~~l~~~~~~~~   96 (108)
                      |..||++|++      +.+++.|+||+..
T Consensus       238 L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         238 LNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             hccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            9999999997      5799999999865

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.79  E-value=7e-19  Score=104.56  Aligned_cols=96  Identities=50%  Similarity=0.797  Sum_probs=76.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..|+...........+.....+... ...+.++.+++.+||..+|.+|
T Consensus       166 ~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R  244 (277)
T cd06641         166 FWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLE-GNYSKPLKEFVEACLNKEPSFR  244 (277)
T ss_pred             cccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCC-cccCHHHHHHHHHHccCChhhC
Confidence            489999998888888999999999999999999999876655444444333222222 2346788999999999999999


Q ss_pred             CCHHHHhcCcccccccc
Q psy2811          82 PFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        82 ~~~~~~l~~~~~~~~~~   98 (108)
                      |++.++++|+||.....
T Consensus       245 p~~~~~l~~~~~~~~~~  261 (277)
T cd06641         245 PTAKELLKHKFIVRFAK  261 (277)
T ss_pred             cCHHHHHhCHHHhhhhh
Confidence            99999999999987533

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.79  E-value=1e-18  Score=102.37  Aligned_cols=92  Identities=42%  Similarity=0.669  Sum_probs=72.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+...+.++|+|++|++++++++|..||.... .......+.........+...+..+.+++.+|+..+|.+
T Consensus       168 ~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~  247 (260)
T cd06606         168 YWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKK  247 (260)
T ss_pred             cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhh
Confidence            5899999988888889999999999999999999997765 333333433222222222244788999999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      ||++.++++||||
T Consensus       248 Rp~~~~ll~~~~~  260 (260)
T cd06606         248 RPTADELLQHPFL  260 (260)
T ss_pred             CCCHHHHhhCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.79  E-value=6.3e-19  Score=107.64  Aligned_cols=95  Identities=21%  Similarity=0.243  Sum_probs=69.6

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC------------------------CCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP------------------------PPQ   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~------------------------~~~   56 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||...+.......+....                        ...
T Consensus       183 ~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (342)
T cd07854         183 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPR  262 (342)
T ss_pred             cccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccC
Confidence            4899998754 557789999999999999999999997765433322221110                        000


Q ss_pred             CC----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 LT----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ~~----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      .+    ....+.++.+++.+||..||.+||++++++.|+||+..
T Consensus       263 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         263 RPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             CCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence            00    01235678899999999999999999999999999743

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.79  E-value=7.4e-19  Score=104.73  Aligned_cols=92  Identities=55%  Similarity=0.966  Sum_probs=70.5

Q ss_pred             cccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC-CCCCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLD-----MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP-QLTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~-----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~   75 (108)
                      .|+|||.+..     ..++.++|+||+|++++++++|..|+...........+...... ...+...+..+.+++.+||.
T Consensus       189 ~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  268 (286)
T cd06638         189 FWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLT  268 (286)
T ss_pred             cccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHcc
Confidence            5999998753     44677999999999999999999999876654444443332211 11222345678999999999


Q ss_pred             cCCCCCCCHHHHhcCccc
Q psy2811          76 KDLEERPFAKELLRHPLL   93 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~   93 (108)
                      .+|++||++.++++|+||
T Consensus       269 ~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         269 KDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CCcccCCCHHHHhhcccC
Confidence            999999999999999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.79  E-value=1.6e-19  Score=109.60  Aligned_cols=93  Identities=24%  Similarity=0.245  Sum_probs=76.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+..+....+.........  ..+..+.+++.+||+.+|.+
T Consensus       160 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~li~~~l~~~p~~  237 (325)
T cd05602         160 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP--NITNSARHLLEGLLQKDRTK  237 (325)
T ss_pred             ccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCC--CCCHHHHHHHHHHcccCHHH
Confidence            4699999999988999999999999999999999999887766655555444332222  45678899999999999999


Q ss_pred             CCCHH----HHhcCccccc
Q psy2811          81 RPFAK----ELLRHPLLKK   95 (108)
Q Consensus        81 R~~~~----~~l~~~~~~~   95 (108)
                      |+++.    ++++|+||..
T Consensus       238 R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         238 RLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             CCCCCCCHHHHhcCcccCC
Confidence            99754    8999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.79  E-value=8.7e-20  Score=112.05  Aligned_cols=95  Identities=23%  Similarity=0.284  Sum_probs=74.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||.+........++....  ...+.....+.++++++.+++ .+|
T Consensus       200 ~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p  278 (360)
T cd05627         200 PDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDS  278 (360)
T ss_pred             ccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cCh
Confidence            35999999999999999999999999999999999998877666555544322  111121124678889998876 499


Q ss_pred             CCCC---CHHHHhcCcccccc
Q psy2811          79 EERP---FAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~---~~~~~l~~~~~~~~   96 (108)
                      .+|+   ++.++++||||++.
T Consensus       279 ~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         279 ENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             hhcCCCCCHHHHhcCCCCCCC
Confidence            9998   48999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.79  E-value=7.4e-19  Score=105.08  Aligned_cols=95  Identities=25%  Similarity=0.334  Sum_probs=77.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|++||.+.+...+.++|+||+|++++++++|..||...........+..+......  ..+..+.+++.+||..+|.+
T Consensus       162 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~p~~  239 (290)
T cd05580         162 PEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS--FFSPDAKDLIRNLLQVDLTK  239 (290)
T ss_pred             ccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc--cCCHHHHHHHHHHccCCHHH
Confidence            3699999998888888999999999999999999999877655555554444333222  34678899999999999999


Q ss_pred             CC-----CHHHHhcCccccccc
Q psy2811          81 RP-----FAKELLRHPLLKKGA   97 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~~   97 (108)
                      |+     ++.++++|+||+...
T Consensus       240 R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         240 RLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             ccCcccCCHHHHHcCcccccCC
Confidence            99     899999999997654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.79  E-value=5.1e-19  Score=108.05  Aligned_cols=98  Identities=26%  Similarity=0.306  Sum_probs=72.6

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC-----------------------CCCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN-----------------------PPPQL   57 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~-----------------------~~~~~   57 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+.+.......+...                       .....
T Consensus       179 ~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (342)
T cd07879         179 WYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYP  258 (342)
T ss_pred             cccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcc
Confidence            5899999876 45788999999999999999999999876644332221110                       00000


Q ss_pred             C------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          58 T------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        58 ~------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      .      ....+..+.+++.+||+.||.+||++.+++.|+||+.....
T Consensus       259 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         259 RKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             cchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence            0      01234668899999999999999999999999999887654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.79  E-value=5.5e-19  Score=107.63  Aligned_cols=87  Identities=20%  Similarity=0.355  Sum_probs=67.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-hhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRAL-FQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||++.+..++.++|+||+|+++|++++ |..||.+....... ..+..+.... .+...+..+.+++.+||..||.
T Consensus       241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~  319 (338)
T cd05102         241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR-APENATPEIYRIMLACWQGDPK  319 (338)
T ss_pred             cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHHccCChh
Confidence            5999999998889999999999999999997 99999875432222 2222222222 2224567889999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.++++
T Consensus       320 ~RPs~~el~~  329 (338)
T cd05102         320 ERPTFSALVE  329 (338)
T ss_pred             hCcCHHHHHH
Confidence            9999999874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.79  E-value=6.9e-20  Score=111.28  Aligned_cols=95  Identities=24%  Similarity=0.272  Sum_probs=73.6

Q ss_pred             Cccccccccc------cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC--CCCCCcCCcHHHHHHHHH
Q psy2811           1 MSVIACEQQL------DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--PQLTKRFDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~------~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~   72 (108)
                      +.|+|||++.      +..++.++|+||+|+++|++++|..||..........++.....  ........+..+.+++.+
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  246 (330)
T cd05601         167 PDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQS  246 (330)
T ss_pred             ccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHH
Confidence            3699999986      45567899999999999999999999988766555554433221  111112346788999999


Q ss_pred             HhhcCCCCCCCHHHHhcCcccccc
Q psy2811          73 CLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        73 ~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ||. +|.+|+++.+++.||||+..
T Consensus       247 ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         247 LLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             Hcc-ChhhCCCHHHHhCCCCcCCC
Confidence            997 99999999999999999764

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.79  E-value=5.4e-19  Score=105.69  Aligned_cols=93  Identities=28%  Similarity=0.354  Sum_probs=68.8

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---CC----------------C-----C
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PP----------------P-----Q   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~~----------------~-----~   56 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+........++...   +.                +     .
T Consensus       176 ~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (295)
T cd07837         176 WYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQD  255 (295)
T ss_pred             CCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchh
Confidence            5899998865 45688999999999999999999999876554332221110   00                0     0


Q ss_pred             CC--CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccc
Q psy2811          57 LT--KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLK   94 (108)
Q Consensus        57 ~~--~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   94 (108)
                      ..  ....+..+.+++.+||..+|.+||++.+++.|+||+
T Consensus       256 ~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         256 LSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence            00  012356788999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.79  E-value=8.8e-19  Score=103.63  Aligned_cols=91  Identities=32%  Similarity=0.532  Sum_probs=67.5

Q ss_pred             ccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHhhcc-CCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           2 SVIACEQQLDMS--YDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIP-RNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         2 ~y~ape~~~~~~--~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      .|++||.+.+..  ++.++|+||+|++++++++|..||...... ....... ....+.. +.....++.+++.+||..+
T Consensus       174 ~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~  252 (268)
T cd06624         174 QYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEI-PESLSAEAKNFILRCFEPD  252 (268)
T ss_pred             cccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCC-CcccCHHHHHHHHHHcCCC
Confidence            689999986533  678999999999999999999998754322 1111111 1111111 2234678899999999999


Q ss_pred             CCCCCCHHHHhcCccc
Q psy2811          78 LEERPFAKELLRHPLL   93 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~   93 (108)
                      |++||++.+++.||||
T Consensus       253 p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         253 PDKRASAHDLLQDPFL  268 (268)
T ss_pred             chhCCCHHHHHhCCCC
Confidence            9999999999999996

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.78  E-value=6.8e-19  Score=105.09  Aligned_cols=95  Identities=21%  Similarity=0.218  Sum_probs=73.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH----hhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRAL----FQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.........    .++......  .....+..+.+++.+||..
T Consensus       165 ~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~  242 (285)
T cd05632         165 VGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEV--YSAKFSEEAKSICKMLLTK  242 (285)
T ss_pred             cCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccc--cCccCCHHHHHHHHHHccC
Confidence            3699999998888999999999999999999999999876543221    122211111  1123467788999999999


Q ss_pred             CCCCCCC-----HHHHhcCccccccc
Q psy2811          77 DLEERPF-----AKELLRHPLLKKGA   97 (108)
Q Consensus        77 ~p~~R~~-----~~~~l~~~~~~~~~   97 (108)
                      +|++|++     +.++++|+||+...
T Consensus       243 ~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         243 DPKQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             CHhHcCCCcccChHHHHcChhhhcCC
Confidence            9999999     88999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.78  E-value=1.1e-18  Score=103.59  Aligned_cols=87  Identities=20%  Similarity=0.292  Sum_probs=71.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+..+...... ...+..+.+++.+||..+|.+
T Consensus       189 ~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  267 (280)
T cd05049         189 RWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRP-RTCPSEVYDIMLGCWKRDPQQ  267 (280)
T ss_pred             eecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCC-CCCCHHHHHHHHHHcCCCccc
Confidence            5999999998889999999999999999998 99999877666555554444333222 245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       268 Rp~~~eil~  276 (280)
T cd05049         268 RINIKDIHE  276 (280)
T ss_pred             CCCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.78  E-value=1.5e-18  Score=101.94  Aligned_cols=91  Identities=26%  Similarity=0.415  Sum_probs=75.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||......+....+..+...... ...+..+.+++..||..+|.+|
T Consensus       166 ~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R  244 (256)
T cd08221         166 YYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV-SVYSSELISLVHSLLQQDPEKR  244 (256)
T ss_pred             cccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc-cccCHHHHHHHHHHcccCcccC
Confidence            589999998888888999999999999999999999887766655555444333322 2456788999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++|+|+
T Consensus       245 ~s~~~ll~~~~l  256 (256)
T cd08221         245 PTADEVLDQPLL  256 (256)
T ss_pred             CCHHHHhhCcCC
Confidence            999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.78  E-value=6.9e-19  Score=104.72  Aligned_cols=92  Identities=26%  Similarity=0.268  Sum_probs=67.8

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC-------------------------CCC
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN-------------------------PPP   55 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~-------------------------~~~   55 (108)
                      .|+|||.+.+. .++.++|+||+|++++++++|..||...+......++...                         ...
T Consensus       164 ~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (283)
T cd07835         164 WYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQ  243 (283)
T ss_pred             CCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccccccc
Confidence            58999987664 4678899999999999999999999776543322221110                         000


Q ss_pred             C--CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          56 Q--LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        56 ~--~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                      .  ......+..+.+++.+||+.+|++||++++++.|+||
T Consensus       244 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         244 DLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             chhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence            0  0011235678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.78  E-value=1.3e-19  Score=111.83  Aligned_cols=95  Identities=24%  Similarity=0.308  Sum_probs=74.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC--CCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--PQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+....+....+.....  ........+..+.+++.+|+ .+|
T Consensus       208 ~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p  286 (376)
T cd05598         208 PNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGA  286 (376)
T ss_pred             ccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCH
Confidence            369999999999999999999999999999999999988776554444433221  11111234677889999876 599


Q ss_pred             CCCC---CHHHHhcCcccccc
Q psy2811          79 EERP---FAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~---~~~~~l~~~~~~~~   96 (108)
                      .+|+   ++.++++|+||+..
T Consensus       287 ~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         287 EDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             hhcCCCCCHHHHhCCCCcCCC
Confidence            9999   89999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.78  E-value=7.3e-19  Score=104.64  Aligned_cols=92  Identities=26%  Similarity=0.393  Sum_probs=67.9

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---------------------CCCCCC-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---------------------PPPQLT-   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~-   58 (108)
                      .|++||.+.+ ..++.++|+||+|++++++++|..||.+....+....+...                     ..+... 
T Consensus       165 ~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T cd07847         165 WYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPET  244 (286)
T ss_pred             ccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCccc
Confidence            5899999876 45788999999999999999999999876554332221100                     000000 


Q ss_pred             -------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 -------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                             ....+..+.+++.+||..+|++||++.+++.|+||
T Consensus       245 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         245 REPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             ccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence                   01225678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.78  E-value=1.4e-18  Score=103.58  Aligned_cols=97  Identities=33%  Similarity=0.434  Sum_probs=73.3

Q ss_pred             ccccccccccCC------CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH---HhhccCCCCCCCCCcCCcHHHHHHHHH
Q psy2811           2 SVIACEQQLDMS------YDARCDIWSLGITAIELAEGDPPLSDLHPMRA---LFQIPRNPPPQLTKRFDCVLLCDFVNE   72 (108)
Q Consensus         2 ~y~ape~~~~~~------~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~   72 (108)
                      .|++||.+.+..      ++.++|+||+|++++++++|..||........   ...+........+. ..+.++.+++.+
T Consensus       166 ~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~  244 (286)
T cd06622         166 SYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPS-GYSDDAQDFVAK  244 (286)
T ss_pred             CccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCc-ccCHHHHHHHHH
Confidence            589999986543      46789999999999999999999976543322   22233333322222 357788999999


Q ss_pred             HhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          73 CLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        73 ~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      ||..+|++||++.+++.|+||......
T Consensus       245 ~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         245 CLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             HcccCcccCCCHHHHhcChhhhhccCC
Confidence            999999999999999999999766544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.78  E-value=7.5e-19  Score=104.60  Aligned_cols=92  Identities=25%  Similarity=0.256  Sum_probs=64.8

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCC-CCCCHHHHHhhccC---C----------------CCCCCC--
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPL-SDLHPMRALFQIPR---N----------------PPPQLT--   58 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~-~~~~~~~~~~~~~~---~----------------~~~~~~--   58 (108)
                      .|+|||.+.+.. ++.++|+||+|++++++++|..|+ .+.+....+..+..   .                ..+...  
T Consensus       164 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (284)
T cd07839         164 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPAT  243 (284)
T ss_pred             CCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCc
Confidence            589999987644 688999999999999999987775 33333222211100   0                000000  


Q ss_pred             ------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 ------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 ------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                            ....+.++++++.+||..||.+|||+.+++.|+||
T Consensus       244 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         244 TSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             chhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence                  01235678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG4279|consensus

Probab=99.78  E-value=6.3e-20  Score=118.28  Aligned_cols=101  Identities=29%  Similarity=0.479  Sum_probs=79.3

Q ss_pred             cccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      -|||||++-.  .+|+.+.|||||||.+.+|.||++||... ++.....++..-..-+..+...+.++++||.+|+.++|
T Consensus       741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~  820 (1226)
T KOG4279|consen  741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDP  820 (1226)
T ss_pred             hhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCc
Confidence            5999999864  56888999999999999999999999764 33444445433332233333568889999999999999


Q ss_pred             CCCCCHHHHhcCcccccccccchh
Q psy2811          79 EERPFAKELLRHPLLKKGAQLAHQ  102 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~~~~~  102 (108)
                      .+||++.++|.+||++....+..+
T Consensus       821 ~~R~sA~~LL~DpFlq~~~kk~r~  844 (1226)
T KOG4279|consen  821 CDRPSAKDLLQDPFLQHNNKKPRP  844 (1226)
T ss_pred             ccCccHHHhccCcccccCCCCCCC
Confidence            999999999999999877555443

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.3e-18  Score=102.36  Aligned_cols=91  Identities=49%  Similarity=0.806  Sum_probs=70.4

Q ss_pred             ccccccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC---CCCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLDM---SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ---LTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~~---~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+.+.   .++.++|+||+|++++++++|..||...........+.......   ......+.++.+++++||.
T Consensus       166 ~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  245 (262)
T cd06613         166 YWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLT  245 (262)
T ss_pred             cccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcC
Confidence            58999998776   78889999999999999999999998776544443333331111   1111235678899999999


Q ss_pred             cCCCCCCCHHHHhcCcc
Q psy2811          76 KDLEERPFAKELLRHPL   92 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~   92 (108)
                      .+|..||++.+++.|+|
T Consensus       246 ~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         246 KDPKKRPTATKLLQHPF  262 (262)
T ss_pred             CChhhCCCHHHHhcCCC
Confidence            99999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.78  E-value=7.5e-19  Score=105.16  Aligned_cols=97  Identities=26%  Similarity=0.293  Sum_probs=71.9

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCCC-----------------C-CC-
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPP-----------------Q-LT-   58 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~~-----------------~-~~-   58 (108)
                      .|++||.+.+. .++.++|+||+|++++++++|..||......+...++..   .+..                 . .. 
T Consensus       168 ~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (294)
T PLN00009        168 WYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPK  247 (294)
T ss_pred             cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCC
Confidence            58999988764 468899999999999999999999987655443332210   0000                 0 00 


Q ss_pred             -----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          59 -----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        59 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                           ....+..+.+++.+|++.+|++||++.+++.|+||++...
T Consensus       248 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~  292 (294)
T PLN00009        248 DLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD  292 (294)
T ss_pred             CHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence                 0123567889999999999999999999999999988754

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.78  E-value=9.3e-19  Score=105.21  Aligned_cols=92  Identities=21%  Similarity=0.218  Sum_probs=66.5

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH---hhccCCCCCC---------------------
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHPMRAL---FQIPRNPPPQ---------------------   56 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~---------------------   56 (108)
                      .|+|||.+.+.. ++.++|+||+|++++++++|..+|.+.+.....   ..+....++.                     
T Consensus       188 ~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (310)
T cd07865         188 WYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQK  267 (310)
T ss_pred             cccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccc
Confidence            589999886643 678899999999999999999999776543221   1111100000                     


Q ss_pred             ------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          57 ------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        57 ------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                            .........+.+++.+||..+|.+||++.++++|+||
T Consensus       268 ~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         268 RKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                  0001124567799999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.78  E-value=1.6e-18  Score=102.46  Aligned_cols=91  Identities=44%  Similarity=0.668  Sum_probs=66.6

Q ss_pred             ccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC--C-CCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ--L-TKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~~l~   75 (108)
                      .|+|||.+.   ...++.++|+||+|++++++++|..||...................  . .....+..+.+++.+||.
T Consensus       171 ~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  250 (267)
T cd06645         171 YWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALT  250 (267)
T ss_pred             cccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHcc
Confidence            589999874   3457789999999999999999999986554333222222111111  1 111235678899999999


Q ss_pred             cCCCCCCCHHHHhcCcc
Q psy2811          76 KDLEERPFAKELLRHPL   92 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~   92 (108)
                      .+|++||++.++++|||
T Consensus       251 ~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         251 KNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CCchhCcCHHHHhcCCC
Confidence            99999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0614|consensus

Probab=99.78  E-value=5.5e-19  Score=110.39  Aligned_cols=96  Identities=25%  Similarity=0.314  Sum_probs=85.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |+|.|||++.+.+++.++|.|++|+++|++++|.+||++.+++.+...|..+....-.+...+....++++++...+|..
T Consensus       583 pEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~E  662 (732)
T KOG0614|consen  583 PEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTE  662 (732)
T ss_pred             cccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHh
Confidence            68999999999999999999999999999999999999999999888888776544444466788889999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |..     +.+|.+|.||.+-
T Consensus       663 RLG~~~~gI~DIkkH~Wf~gf  683 (732)
T KOG0614|consen  663 RLGYQKGGINDIKKHRWFEGF  683 (732)
T ss_pred             hhccccCChHHHHhhhhhhcC
Confidence            984     8999999999754

>KOG0696|consensus

Probab=99.77  E-value=1.2e-18  Score=107.06  Aligned_cols=94  Identities=18%  Similarity=0.228  Sum_probs=82.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |.|+|||++....|+.++|+|++|+++|+|+.|++||.+.+..+.+..|.......+.  ..+.+..++.++.|...|.+
T Consensus       514 PdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK--slSkEAv~ickg~ltK~P~k  591 (683)
T KOG0696|consen  514 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK--SLSKEAVAICKGLLTKHPGK  591 (683)
T ss_pred             CcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc--cccHHHHHHHHHHhhcCCcc
Confidence            6899999999999999999999999999999999999999988888887666555544  56889999999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |..     -++|-.|+||+..
T Consensus       592 RLGcg~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  592 RLGCGPEGERDIREHPFFRRI  612 (683)
T ss_pred             ccCCCCccccchhhCcchhhc
Confidence            984     3678899999754

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.77  E-value=1.4e-18  Score=103.29  Aligned_cols=88  Identities=17%  Similarity=0.255  Sum_probs=69.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||++.+..++.++|+||+|++++++++ |..||.+....+....+........ +...+..+.+++.+|+..+|++
T Consensus       186 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~cl~~~p~~  264 (277)
T cd05036         186 KWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDP-PKGCPGPVYRIMTDCWQHTPED  264 (277)
T ss_pred             hhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHcCCCccc
Confidence            5899999988889999999999999999996 9999987765554444333222221 2244678889999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.++++|
T Consensus       265 Rps~~~vl~~  274 (277)
T cd05036         265 RPNFATILER  274 (277)
T ss_pred             CcCHHHHHHH
Confidence            9999999865

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG1095|consensus

Probab=99.77  E-value=7.4e-19  Score=117.07  Aligned_cols=87  Identities=18%  Similarity=0.362  Sum_probs=75.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|||||.+....|+.++||||||+++||+++ |..||...+..+.+.-...+. +...+..++..+.++|..||+.+|++
T Consensus       869 kWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~  947 (1025)
T KOG1095|consen  869 KWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPED  947 (1025)
T ss_pred             ecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhh
Confidence            5999999999999999999999999999997 899999988887776444444 44444467888889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++..|++
T Consensus       948 RP~F~~i~~  956 (1025)
T KOG1095|consen  948 RPSFRTIVE  956 (1025)
T ss_pred             CccHHHHHh
Confidence            999999985

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.77  E-value=9.6e-19  Score=104.13  Aligned_cols=92  Identities=27%  Similarity=0.258  Sum_probs=69.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC------------------CCCC-C---C
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP------------------PPQL-T---K   59 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~------------------~~~~-~---~   59 (108)
                      .|++||.+.+..++.++|+||+|++++++++|.++|......+...++....                  .... .   .
T Consensus       171 ~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T cd07838         171 WYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFK  250 (287)
T ss_pred             cccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchh
Confidence            5899999988888999999999999999999999998766544333221100                  0000 0   0


Q ss_pred             ---cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          60 ---RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        60 ---~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                         ...+..+.+++.+||+.||++||++.+++.|+||
T Consensus       251 ~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         251 SFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             hhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence               0124567789999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0661|consensus

Probab=99.77  E-value=1.7e-18  Score=106.99  Aligned_cols=98  Identities=22%  Similarity=0.320  Sum_probs=77.5

Q ss_pred             ccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC---------------------CCCCCC
Q psy2811           2 SVIACEQQL-DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP---------------------PPQLTK   59 (108)
Q Consensus         2 ~y~ape~~~-~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~   59 (108)
                      .|.|||++. ..-|+.+.|+|++||+++|+.+-++.|.|.+..+++.+|+.-.                     .+....
T Consensus       174 WYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~  253 (538)
T KOG0661|consen  174 WYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKP  253 (538)
T ss_pred             cccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCC
Confidence            489999975 5668999999999999999999999999998888777663210                     000000


Q ss_pred             -------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          60 -------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        60 -------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                             ...+.++.+++..|+.+||.+||++.++++||||+.....
T Consensus       254 ~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~  300 (538)
T KOG0661|consen  254 SPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS  300 (538)
T ss_pred             CChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence                   0136788899999999999999999999999999866444

>KOG0690|consensus

Probab=99.77  E-value=5.5e-19  Score=105.69  Aligned_cols=94  Identities=21%  Similarity=0.218  Sum_probs=81.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |+|+|||++....|+..+|+|.+|+++|+|..|+.||...+....+..|..+....+.  ..+++.+.++.++|..||.+
T Consensus       332 PEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr--~ls~eAktLLsGLL~kdP~k  409 (516)
T KOG0690|consen  332 PEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR--TLSPEAKTLLSGLLKKDPKK  409 (516)
T ss_pred             hhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc--cCCHHHHHHHHHHhhcChHh
Confidence            6899999999999999999999999999999999999988877666666655554433  56788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |.     ++.+|.+|+||.+.
T Consensus       410 RLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  410 RLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             hcCCCchhHHHHHhhhhhccC
Confidence            98     58999999999865

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.77  E-value=2.2e-18  Score=101.77  Aligned_cols=93  Identities=29%  Similarity=0.528  Sum_probs=70.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP---MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||.....   ......+.........+...+.++.+++..||..+|
T Consensus       173 ~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  252 (268)
T cd06630         173 AFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQP  252 (268)
T ss_pred             ceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCc
Confidence            58999999888888999999999999999999999865432   222222211111111112346788899999999999


Q ss_pred             CCCCCHHHHhcCcccc
Q psy2811          79 EERPFAKELLRHPLLK   94 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~   94 (108)
                      .+||++.++++||||+
T Consensus       253 ~~R~~~~~ll~~~~~~  268 (268)
T cd06630         253 EDRPPSRELLKHPVFR  268 (268)
T ss_pred             ccCcCHHHHhcCcccC
Confidence            9999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.77  E-value=2.7e-18  Score=100.69  Aligned_cols=91  Identities=24%  Similarity=0.370  Sum_probs=75.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||...+.......+.....+.... ..+.++.+++.+|+..+|.+|
T Consensus       166 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R  244 (256)
T cd08530         166 HYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPP-IYSQDLQNFIRSMLQVKPKLR  244 (256)
T ss_pred             cccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCch-hhCHHHHHHHHHHcCCCcccC
Confidence            5899999988888889999999999999999999998877655544444443333322 456789999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.++++||++
T Consensus       245 p~~~~~l~~p~~  256 (256)
T cd08530         245 PNCDKILASPAV  256 (256)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.77  E-value=2e-18  Score=100.98  Aligned_cols=90  Identities=27%  Similarity=0.393  Sum_probs=73.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+...+.++|+|++|++++++++|..||...+.......+.......  +...+..+.+++++||..||++|
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~R  235 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRF--PEFLSPEARDLISGLLQKDPTKR  235 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHhcCCHhhC
Confidence            5899999988888889999999999999999999998776655455544432222  22346788999999999999999


Q ss_pred             CCH---HHHhcCccc
Q psy2811          82 PFA---KELLRHPLL   93 (108)
Q Consensus        82 ~~~---~~~l~~~~~   93 (108)
                      |++   ++++.|+||
T Consensus       236 ~~~~~~~~l~~~~~f  250 (250)
T cd05123         236 LGSGGAEEIKAHPFF  250 (250)
T ss_pred             CCcccHHHHHhCCCC
Confidence            999   999999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.77  E-value=1.9e-18  Score=105.19  Aligned_cols=95  Identities=25%  Similarity=0.271  Sum_probs=70.9

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCCCC-----------------CC--
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPPQ-----------------LT--   58 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~-----------------~~--   58 (108)
                      .|++||.+.+. .++.++|+||+|++++++++|..||.+.+..+....+..   .+...                 ..  
T Consensus       198 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (335)
T PTZ00024        198 WYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKD  277 (335)
T ss_pred             CCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCccc
Confidence            58999998764 468899999999999999999999987765443322211   00000                 00  


Q ss_pred             ----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          59 ----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        59 ----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                          ....+..+.+++.+||..+|++||++.+++.|+||+..
T Consensus       278 ~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        278 LKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             HHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence                01225678899999999999999999999999999855

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.77  E-value=2.3e-18  Score=102.59  Aligned_cols=92  Identities=28%  Similarity=0.447  Sum_probs=68.6

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---C------------------CCCCC--
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---N------------------PPPQL--   57 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~------------------~~~~~--   57 (108)
                      .|++||.+.+. .++.++|+||+|++++++++|..+|.+....+....+..   .                  .....  
T Consensus       166 ~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (288)
T cd07833         166 WYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQ  245 (288)
T ss_pred             CCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCC
Confidence            48999999887 778899999999999999999999976654332211100   0                  00000  


Q ss_pred             -------CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          58 -------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        58 -------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                             .+...+.++.+++++||..+|++||++.++++|+||
T Consensus       246 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         246 PESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                   011126778899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.77  E-value=1.6e-18  Score=106.43  Aligned_cols=94  Identities=24%  Similarity=0.268  Sum_probs=64.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCC-CCCCCCCHH---------HHHhhccC----CCCCCC----------
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGD-PPLSDLHPM---------RALFQIPR----NPPPQL----------   57 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~-~~~~~~~~~---------~~~~~~~~----~~~~~~----------   57 (108)
                      .|+|||++.+..++.++|+||+|+++|+++++. .+|......         ..+..+..    .+....          
T Consensus       221 ~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  300 (357)
T PHA03209        221 ETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRG  300 (357)
T ss_pred             cccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHH
Confidence            599999999989999999999999999999754 333321110         00111000    000000          


Q ss_pred             ------------------CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          58 ------------------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        58 ------------------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                                        .....+....+++.+||+.||.+||++.|+++||||+.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        301 FIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                              00012445667999999999999999999999999975

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.77  E-value=2e-18  Score=102.34  Aligned_cols=90  Identities=19%  Similarity=0.229  Sum_probs=72.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.....+.++|+|++|++++++++|..||...........+........  ...+..+.+++.+||+.+|.+|
T Consensus       187 ~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R  264 (280)
T cd05581         187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFP--PNFPPDAKDLIEKLLVLDPQDR  264 (280)
T ss_pred             cccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCC--CccCHHHHHHHHHHhcCCHhhC
Confidence            58999998887788899999999999999999999988765544444332222111  1346788899999999999999


Q ss_pred             CCH----HHHhcCccc
Q psy2811          82 PFA----KELLRHPLL   93 (108)
Q Consensus        82 ~~~----~~~l~~~~~   93 (108)
                      |++    +++++|+||
T Consensus       265 ~~~~~~~~~ll~~~~~  280 (280)
T cd05581         265 LGVNEGYDELKAHPFF  280 (280)
T ss_pred             CCcccCHHHHhcCCCC
Confidence            999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.77  E-value=2.3e-18  Score=101.75  Aligned_cols=91  Identities=42%  Similarity=0.622  Sum_probs=67.2

Q ss_pred             ccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC---CCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL---TKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+.   ...++.++|+||+|++++++++|..|+...........+........   .....+..+.+++++||.
T Consensus       171 ~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  250 (267)
T cd06646         171 YWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLT  250 (267)
T ss_pred             cccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhh
Confidence            589999874   34467789999999999999999999865544333333222221111   111236788999999999


Q ss_pred             cCCCCCCCHHHHhcCcc
Q psy2811          76 KDLEERPFAKELLRHPL   92 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~   92 (108)
                      .+|++||+++++++|.|
T Consensus       251 ~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         251 KNPKKRPTAERLLTHLF  267 (267)
T ss_pred             CChhhCcCHHHHhcCCC
Confidence            99999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.77  E-value=2.9e-18  Score=102.44  Aligned_cols=86  Identities=20%  Similarity=0.273  Sum_probs=70.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+..+....... ..+..+.+++.+||..+|.+
T Consensus       187 ~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~-~~~~~l~~li~~~l~~~p~~  265 (288)
T cd05093         187 RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR-TCPKEVYDLMLGCWQREPHM  265 (288)
T ss_pred             cccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCC-CCCHHHHHHHHHHccCChhh
Confidence            5999999988889999999999999999998 899998877666555555544333222 35678999999999999999


Q ss_pred             CCCHHHHh
Q psy2811          81 RPFAKELL   88 (108)
Q Consensus        81 R~~~~~~l   88 (108)
                      ||++.+++
T Consensus       266 Rpt~~~v~  273 (288)
T cd05093         266 RLNIKEIH  273 (288)
T ss_pred             CCCHHHHH
Confidence            99999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.77  E-value=4e-18  Score=100.35  Aligned_cols=87  Identities=17%  Similarity=0.210  Sum_probs=70.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+....++.++|+||+|++++++++ |..||......+....+..+.....+ ...+.++.+++..||+.+|++
T Consensus       163 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~~~~~~p~~  241 (257)
T cd05116         163 KWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECP-QRCPPEMYDLMKLCWTYGVDE  241 (257)
T ss_pred             cccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHhccCchh
Confidence            5899999988888889999999999999997 99999877666655555544332222 245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+|..
T Consensus       242 Rp~~~~i~~  250 (257)
T cd05116         242 RPGFAVVEL  250 (257)
T ss_pred             CcCHHHHHH
Confidence            999998864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.77  E-value=2.7e-18  Score=102.20  Aligned_cols=93  Identities=27%  Similarity=0.328  Sum_probs=67.6

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C------------------CCCCC-
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P------------------PPQLT-   58 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~------------------~~~~~-   58 (108)
                      .|+|||.+.+.. ++.++|+|++|++++++++|.++|.+........++...   +                  .+... 
T Consensus       165 ~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T cd07832         165 WYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKP  244 (286)
T ss_pred             cccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCc
Confidence            589999986544 578999999999999999998888766543332221110   0                  00000 


Q ss_pred             ------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccc
Q psy2811          59 ------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLK   94 (108)
Q Consensus        59 ------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   94 (108)
                            ....+..+.+++.+||..+|.+||+++++++|+||.
T Consensus       245 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         245 IPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             chHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence                  012246788999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.76  E-value=1.6e-18  Score=105.89  Aligned_cols=98  Identities=27%  Similarity=0.274  Sum_probs=72.2

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC-----------------------C-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP-----------------------Q-   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------------------~-   56 (108)
                      .|++||.+.+ ..++.++|+||+|++++++++|..||.+.+.......+......                       . 
T Consensus       180 ~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (343)
T cd07851         180 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMP  259 (343)
T ss_pred             cccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccC
Confidence            5899998765 35678999999999999999999999876654433322111000                       0 


Q ss_pred             ---CC--CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          57 ---LT--KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        57 ---~~--~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                         ..  ....+..+.+++.+||..+|++||++.+++.|+||+.....
T Consensus       260 ~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         260 KKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             CCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence               00  00136678899999999999999999999999999765444

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.76  E-value=2.8e-19  Score=105.08  Aligned_cols=92  Identities=35%  Similarity=0.558  Sum_probs=69.5

Q ss_pred             ccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---HHHHHhhccCCCCCC--CCCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQL-DMSYDARCDIWSLGITAIELAEGDPPLSDLH---PMRALFQIPRNPPPQ--LTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~-~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~   75 (108)
                      .|+|||.+. +..++.++|+||+|++++++++|..|+....   ......+........  .........+.+++..||.
T Consensus       163 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  242 (260)
T PF00069_consen  163 EYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLS  242 (260)
T ss_dssp             GGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHcc
Confidence            589999998 7788889999999999999999999998763   222222221111110  0101124789999999999


Q ss_pred             cCCCCCCCHHHHhcCccc
Q psy2811          76 KDLEERPFAKELLRHPLL   93 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~   93 (108)
                      .+|++||++.++++||||
T Consensus       243 ~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  243 KDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             SSGGGSTTHHHHHTSGGG
T ss_pred             CChhHCcCHHHHhcCCCC
Confidence            999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.76  E-value=1.8e-18  Score=103.00  Aligned_cols=92  Identities=26%  Similarity=0.456  Sum_probs=66.6

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---------------------CCCCCC-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---------------------PPPQLT-   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~-   58 (108)
                      .|++||.+.+ ..++.++|+||+|++++++++|.++|......+....+...                     ..+... 
T Consensus       165 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (286)
T cd07846         165 WYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKE  244 (286)
T ss_pred             eccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccC
Confidence            5899999865 34677899999999999999999998765543322221100                     000000 


Q ss_pred             -------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 -------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                             ....+..+.+++.+||..+|.+||++.++++|+||
T Consensus       245 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         245 IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             cchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                   01235678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.76  E-value=2.4e-18  Score=102.49  Aligned_cols=96  Identities=21%  Similarity=0.249  Sum_probs=71.0

Q ss_pred             Cccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQL-DMSYDARCDIWSLGITAIELAEGDPPLSDLHP--MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~-~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      +.|+|||.+. +..++.++|+||+|++++++++|..||.....  ...............+ ...+.++.+++.+||..|
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~  237 (279)
T cd05633         159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELP-DSFSPELKSLLEGLLQRD  237 (279)
T ss_pred             cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCc-cccCHHHHHHHHHHhcCC
Confidence            3699999986 45678899999999999999999999965422  1112221111111111 234678899999999999


Q ss_pred             CCCCC-----CHHHHhcCccccccc
Q psy2811          78 LEERP-----FAKELLRHPLLKKGA   97 (108)
Q Consensus        78 p~~R~-----~~~~~l~~~~~~~~~   97 (108)
                      |++|+     ++.++++|+||++..
T Consensus       238 p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         238 VSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             HHHhcCCCCCCHHHHHhCccccCCC
Confidence            99999     699999999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.76  E-value=2.3e-18  Score=102.33  Aligned_cols=92  Identities=28%  Similarity=0.372  Sum_probs=68.5

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---CCC---------------------C
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PPP---------------------Q   56 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~~~---------------------~   56 (108)
                      .|++||.+.+. .++.++|+|++|++++++++|..+|...+..+...++...   ..+                     .
T Consensus       163 ~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T cd05118         163 WYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAG  242 (283)
T ss_pred             cccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccc
Confidence            48999998776 6788999999999999999999999776654332221110   000                     0


Q ss_pred             C----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          57 L----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        57 ~----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                      .    .....+.++.+++..||..+|.+||++++++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         243 MPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             cCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence            0    001135678899999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.76  E-value=4.2e-18  Score=100.15  Aligned_cols=87  Identities=22%  Similarity=0.328  Sum_probs=71.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...+..+....+..+.....+ ...+..+.+++.+||..+|++
T Consensus       166 ~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li~~c~~~~p~~  244 (256)
T cd05114         166 KWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP-KLASMTVYEVMYSCWHEKPEG  244 (256)
T ss_pred             hhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHccCCccc
Confidence            5899999988888999999999999999999 89999887766666665544332222 245678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       245 Rps~~~l~~  253 (256)
T cd05114         245 RPTFAELLR  253 (256)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.76  E-value=5e-18  Score=100.22  Aligned_cols=87  Identities=15%  Similarity=0.247  Sum_probs=69.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.+..+....+....... .+...+.++.+++.+||..+|++
T Consensus       170 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~  248 (263)
T cd05052         170 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRME-RPEGCPPKVYELMRACWQWNPSD  248 (263)
T ss_pred             ccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHccCCccc
Confidence            5999999988889999999999999999998 899998776655544443332222 22245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       249 Rp~~~~l~~  257 (263)
T cd05052         249 RPSFAEIHQ  257 (263)
T ss_pred             CCCHHHHHH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.76  E-value=3.1e-18  Score=101.77  Aligned_cols=93  Identities=25%  Similarity=0.226  Sum_probs=71.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||.....    ......+...... .. ...+..+.+++.+||..+
T Consensus       159 ~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~li~~~l~~~  236 (277)
T cd05577         159 GYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVE-YP-DKFSPEAKDLCEALLQKD  236 (277)
T ss_pred             CcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccccccc-CC-ccCCHHHHHHHHHHccCC
Confidence            58999999888888899999999999999999999976543    1112222211111 11 134778899999999999


Q ss_pred             CCCCC-----CHHHHhcCcccccc
Q psy2811          78 LEERP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        78 p~~R~-----~~~~~l~~~~~~~~   96 (108)
                      |.+|+     ++.+++.|+||+..
T Consensus       237 p~~R~~~~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         237 PEKRLGCRGGSADEVREHPLFKDL  260 (277)
T ss_pred             hhHccCCCcccHHHHHhChhhhcC
Confidence            99999     88889999999654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.76  E-value=2.3e-18  Score=104.90  Aligned_cols=97  Identities=24%  Similarity=0.254  Sum_probs=69.6

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc---cCCC-------------------CCCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNP-------------------PPQLT   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~---~~~~-------------------~~~~~   58 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+.+.......+   ...+                   .+...
T Consensus       174 ~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (336)
T cd07849         174 WYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKP  253 (336)
T ss_pred             CccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCC
Confidence            5899998754 55788999999999999999999999765433221111   0000                   00000


Q ss_pred             -------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          59 -------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        59 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                             ....+..+.+++.+||+.+|++||++.++++|+||+....
T Consensus       254 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         254 KVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             cccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence                   0123567889999999999999999999999999976543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.76  E-value=2.1e-18  Score=106.42  Aligned_cols=96  Identities=20%  Similarity=0.222  Sum_probs=73.0

Q ss_pred             CccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC--CCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMS----YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--PQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~----~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..    ++.++|+||+|+++|+|++|..||...+......++.....  ..+.....+..+++++..||
T Consensus       207 ~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  286 (371)
T cd05622         207 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL  286 (371)
T ss_pred             ccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHc
Confidence            4699999987543    67899999999999999999999998877666666544322  12222235788999999999


Q ss_pred             hcCCC--CCCCHHHHhcCcccccc
Q psy2811          75 RKDLE--ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~--~R~~~~~~l~~~~~~~~   96 (108)
                      ..++.  .|+++.++++|+||++.
T Consensus       287 ~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         287 TDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             CChhhhcCCCCHHHHhcCcccCCC
Confidence            74433  27799999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.76  E-value=5.1e-18  Score=101.06  Aligned_cols=94  Identities=21%  Similarity=0.260  Sum_probs=71.5

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC---HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLH---PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      .|++||.+.+ ..++.++|+||+|++++++++|..||....   ............. ..+ ...+..+.+++.+||..+
T Consensus       160 ~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~-~~~s~~~~~li~~~l~~~  237 (278)
T cd05606         160 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELP-DSFSPELRSLLEGLLQRD  237 (278)
T ss_pred             CCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCC-CCC-CcCCHHHHHHHHHHhhcC
Confidence            5899999874 457889999999999999999999997652   2222222211111 122 134788999999999999


Q ss_pred             CCCCC-----CHHHHhcCccccccc
Q psy2811          78 LEERP-----FAKELLRHPLLKKGA   97 (108)
Q Consensus        78 p~~R~-----~~~~~l~~~~~~~~~   97 (108)
                      |.+|+     ++.++++|+||++..
T Consensus       238 p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         238 VNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             HHhccCCCCCCHHHHHhCccccCCC
Confidence            99999     999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=5.7e-18  Score=99.15  Aligned_cols=91  Identities=43%  Similarity=0.638  Sum_probs=73.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||...+..++.++|+|++|++++++++|..||..................... ...+..+.+++.+||..+|++|
T Consensus       164 ~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R  242 (254)
T cd06627         164 YWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLP-EGISPELKDFLMQCFQKDPNLR  242 (254)
T ss_pred             hhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCC-CCCCHHHHHHHHHHHhCChhhC
Confidence            589999988777888999999999999999999999876654444443333322222 2346788999999999999999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.+++.|+||
T Consensus       243 ~~~~~~l~~~~~  254 (254)
T cd06627         243 PTAKQLLKHPWI  254 (254)
T ss_pred             cCHHHHhcCCCC
Confidence            999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.76  E-value=5.4e-18  Score=100.94  Aligned_cols=87  Identities=17%  Similarity=0.203  Sum_probs=71.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+....+....+......... ...+..+.+++..||+.+|.+
T Consensus       191 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~  269 (283)
T cd05091         191 RWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP-DDCPAWVYTLMLECWNEFPSR  269 (283)
T ss_pred             cccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC-CCCCHHHHHHHHHHhCCCccc
Confidence            6999999988888999999999999999997 88898887766666655554433222 245778899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       270 RP~~~~i~~  278 (283)
T cd05091         270 RPRFKDIHS  278 (283)
T ss_pred             CCCHHHHHH
Confidence            999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.76  E-value=2.7e-18  Score=104.79  Aligned_cols=89  Identities=19%  Similarity=0.372  Sum_probs=67.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+....+.+............+...+.++.+++.+||+.+|++
T Consensus       240 ~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  319 (337)
T cd05054         240 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPED  319 (337)
T ss_pred             cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhh
Confidence            5999999999999999999999999999997 999997654322222221111111122234678899999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       320 RPs~~ell~~  329 (337)
T cd05054         320 RPTFSELVEI  329 (337)
T ss_pred             CcCHHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.76  E-value=1.7e-18  Score=106.79  Aligned_cols=96  Identities=20%  Similarity=0.243  Sum_probs=72.9

Q ss_pred             CccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC--CCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMS----YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--PQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~----~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..    ++.++|+||+|+++|+|++|..||...+......++.....  ..+.....+..+++++..|+
T Consensus       207 ~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L  286 (370)
T cd05621         207 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFL  286 (370)
T ss_pred             cccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHc
Confidence            4699999987643    67799999999999999999999988876665555544321  11221234778889999999


Q ss_pred             hcCCC--CCCCHHHHhcCcccccc
Q psy2811          75 RKDLE--ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~--~R~~~~~~l~~~~~~~~   96 (108)
                      ..++.  .|+++.++++||||+..
T Consensus       287 ~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         287 TDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             cCchhccCCCCHHHHhcCcccCCC
Confidence            75554  38899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.76  E-value=2.7e-18  Score=106.04  Aligned_cols=88  Identities=19%  Similarity=0.355  Sum_probs=67.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++|+||+|++++++++ |..||.....................+...+.++.+++.+||+.+|.+
T Consensus       279 ~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~  358 (374)
T cd05106         279 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTE  358 (374)
T ss_pred             ceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhh
Confidence            5999999988889999999999999999997 999997754433333332222222222234688999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       359 RPs~~~l~~  367 (374)
T cd05106         359 RPTFSQISQ  367 (374)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.76  E-value=3.7e-18  Score=107.74  Aligned_cols=95  Identities=29%  Similarity=0.288  Sum_probs=65.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHhhccCCC-----CCC-----------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--------PMRALFQIPRNP-----PPQ-----------   56 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--------~~~~~~~~~~~~-----~~~-----------   56 (108)
                      +.|++||++.+..++.++||||+|+++|++++|..++-...        .......+....     .+.           
T Consensus       326 ~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~  405 (461)
T PHA03211        326 VDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYR  405 (461)
T ss_pred             cCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHH
Confidence            36999999999889999999999999999998764432111        111111110000     000           


Q ss_pred             ----------CCC------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          57 ----------LTK------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        57 ----------~~~------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                                ...      ......+.+|+.+||..||.+||++.|+|+|+||+.
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        406 HRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             hhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                      000      012346789999999999999999999999999975

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.76  E-value=2.6e-18  Score=101.12  Aligned_cols=91  Identities=24%  Similarity=0.275  Sum_probs=71.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP--MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||.....  .............. .+...+..+.+++.+||..+|.
T Consensus       164 ~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~  242 (258)
T cd05578         164 GYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVL-YPATWSTEAIDAINKLLERDPQ  242 (258)
T ss_pred             hhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccccc-CcccCcHHHHHHHHHHccCChh
Confidence            58999999888889999999999999999999999987653  22222222211111 1223467889999999999999


Q ss_pred             CCCCH--HHHhcCccc
Q psy2811          80 ERPFA--KELLRHPLL   93 (108)
Q Consensus        80 ~R~~~--~~~l~~~~~   93 (108)
                      +|+++  .+++.|+||
T Consensus       243 ~R~~~~~~~l~~~~~~  258 (258)
T cd05578         243 KRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HcCCccHHHHhcCCCC
Confidence            99999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=9e-18  Score=99.19  Aligned_cols=91  Identities=26%  Similarity=0.470  Sum_probs=73.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||..........++.........+...+..+.+++..|+. ++..|
T Consensus       174 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r  252 (264)
T cd06653         174 YWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRR  252 (264)
T ss_pred             cccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccC
Confidence            58999999888888899999999999999999999987766555555443333222233457889999999999 46999


Q ss_pred             CCHHHHhcCccc
Q psy2811          82 PFAKELLRHPLL   93 (108)
Q Consensus        82 ~~~~~~l~~~~~   93 (108)
                      |++.+++.|||.
T Consensus       253 ~~~~~~~~~~~~  264 (264)
T cd06653         253 PTAEFLLRHPFV  264 (264)
T ss_pred             ccHHHHhcCCCC
Confidence            999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.76  E-value=2.9e-18  Score=102.56  Aligned_cols=92  Identities=25%  Similarity=0.277  Sum_probs=67.9

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC--------------------------CC
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN--------------------------PP   54 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~--------------------------~~   54 (108)
                      .|++||.+.+.. ++.++|+||+|++++++++|..||..........++...                          ..
T Consensus       171 ~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (293)
T cd07843         171 WYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPY  250 (293)
T ss_pred             cccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccc
Confidence            589999987644 578999999999999999999999876544332221100                          00


Q ss_pred             ----CCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          55 ----PQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        55 ----~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                          ........+..+.+++++||+.+|++||++.|++.|+||
T Consensus       251 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         251 NQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                000100135678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.75  E-value=4.4e-18  Score=102.32  Aligned_cols=92  Identities=23%  Similarity=0.248  Sum_probs=66.8

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhcc---CCCCC-------------------CCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIP---RNPPP-------------------QLT   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~---~~~~~-------------------~~~   58 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|.+||.+.+.......+.   ....+                   ...
T Consensus       191 ~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (311)
T cd07866         191 WYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYP  270 (311)
T ss_pred             CcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCC
Confidence            4899998765 447889999999999999999999998765543222211   00000                   000


Q ss_pred             C------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 K------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 ~------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                      .      ......+.+++.+||..+|++||++.+++.|+||
T Consensus       271 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         271 RTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             ccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            0      0123567899999999999999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.75  E-value=6.9e-18  Score=100.83  Aligned_cols=94  Identities=19%  Similarity=0.272  Sum_probs=74.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+....+....+......... ...+..+.+++.+||+.+|++
T Consensus       186 ~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  264 (288)
T cd05061         186 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP-DNCPERVTDLMRMCWQFNPKM  264 (288)
T ss_pred             cccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcCCChhH
Confidence            4999999988888999999999999999998 78898877665555444433322222 234678999999999999999


Q ss_pred             CCCHHHHhc------Ccccccc
Q psy2811          81 RPFAKELLR------HPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~------~~~~~~~   96 (108)
                      ||++.++++      |+||++.
T Consensus       265 Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         265 RPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CcCHHHHHHHHHhhcCCCCCCC
Confidence            999999975      8888765

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.75  E-value=4.5e-18  Score=105.08  Aligned_cols=88  Identities=20%  Similarity=0.377  Sum_probs=67.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||..........+..........+...+.++.+++..||+.||++
T Consensus       281 ~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  360 (375)
T cd05104         281 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLK  360 (375)
T ss_pred             ceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhH
Confidence            4999999998889999999999999999997 888887654333222222222222222245678999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       361 RPs~~eil~  369 (375)
T cd05104         361 RPTFKQIVQ  369 (375)
T ss_pred             CcCHHHHHH
Confidence            999999985

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.75  E-value=7e-18  Score=100.95  Aligned_cols=87  Identities=18%  Similarity=0.308  Sum_probs=69.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+..+...... ...+..+.+++.+||+.+|.+
T Consensus       190 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~  268 (291)
T cd05094         190 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP-RVCPKEVYDIMLGCWQREPQQ  268 (291)
T ss_pred             eecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCC-ccCCHHHHHHHHHHcccChhh
Confidence            5999999998889999999999999999998 99998777665554444443332222 234678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       269 Rpt~~~v~~  277 (291)
T cd05094         269 RLNIKEIYK  277 (291)
T ss_pred             CcCHHHHHH
Confidence            999999873

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.75  E-value=3.9e-18  Score=100.19  Aligned_cols=88  Identities=20%  Similarity=0.323  Sum_probs=71.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|+|||++.+..++.++|+||+|++++++++|..||...+.......+........+ ...+..+.+++.+||+.+|.+|
T Consensus       165 ~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R  243 (255)
T cd08219         165 YYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLP-SHYSYELRSLIKQMFKRNPRSR  243 (255)
T ss_pred             cccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCC-cccCHHHHHHHHHHHhCCcccC
Confidence            589999998888899999999999999999999999887765555555444333222 2346778899999999999999


Q ss_pred             CCHHHHhcC
Q psy2811          82 PFAKELLRH   90 (108)
Q Consensus        82 ~~~~~~l~~   90 (108)
                      |++.+++.-
T Consensus       244 p~~~~il~~  252 (255)
T cd08219         244 PSATTILSR  252 (255)
T ss_pred             CCHHHHhhc
Confidence            999999854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.75  E-value=7.7e-18  Score=100.29  Aligned_cols=87  Identities=20%  Similarity=0.311  Sum_probs=69.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||......+....+......... ...+..+.+++.+||..||.+
T Consensus       189 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~P~~  267 (280)
T cd05092         189 RWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERP-RTCPPEVYAIMQGCWQREPQQ  267 (280)
T ss_pred             cccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCC-CCCCHHHHHHHHHHccCChhh
Confidence            5999999988889999999999999999998 89999776665555444443322222 245678889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++.+
T Consensus       268 Rp~~~~l~~  276 (280)
T cd05092         268 RMVIKDIHS  276 (280)
T ss_pred             CCCHHHHHH
Confidence            999999873

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.75  E-value=6.3e-18  Score=100.45  Aligned_cols=88  Identities=17%  Similarity=0.264  Sum_probs=70.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.........+......... ...+..+.+++.+||+.+|++
T Consensus       186 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  264 (277)
T cd05062         186 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKM  264 (277)
T ss_pred             hhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC-CCCCHHHHHHHHHHcCCChhh
Confidence            5999999988888999999999999999998 78899877665555444433332222 245678899999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       265 Rps~~e~l~~  274 (277)
T cd05062         265 RPSFLEIISS  274 (277)
T ss_pred             CcCHHHHHHH
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.75  E-value=4.2e-18  Score=102.06  Aligned_cols=97  Identities=23%  Similarity=0.223  Sum_probs=70.0

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C-------------------CCCC-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P-------------------PPQL-   57 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~-------------------~~~~-   57 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|.++|.+....+...++...   +                   .... 
T Consensus       167 ~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (298)
T cd07841         167 WYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTP  246 (298)
T ss_pred             eeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcc
Confidence            5899998865 45678899999999999999998888765543322222110   0                   0000 


Q ss_pred             ---CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          58 ---TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        58 ---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                         .....+..+.+++.+||..+|++||++.+++.|+||++...
T Consensus       247 ~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~  290 (298)
T cd07841         247 LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA  290 (298)
T ss_pred             hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence               00122567889999999999999999999999999987643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.75  E-value=4.4e-18  Score=101.29  Aligned_cols=92  Identities=27%  Similarity=0.359  Sum_probs=67.3

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C-----------------CCCCC--
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P-----------------PPQLT--   58 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~--   58 (108)
                      .|++||.+.+. .++.++|+|++|++++++++|..||.+.+..+...++...   +                 .+...  
T Consensus       165 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T cd07836         165 WYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQ  244 (284)
T ss_pred             cccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChH
Confidence            58999988664 4678999999999999999999999876544332221100   0                 00000  


Q ss_pred             -----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 -----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                           ....+..+.+++.+|++.+|.+||++.++++|+||
T Consensus       245 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         245 DLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                 00225677899999999999999999999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.75  E-value=4e-18  Score=103.78  Aligned_cols=96  Identities=17%  Similarity=0.192  Sum_probs=72.2

Q ss_pred             Cccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-C--CcCCcHHHHHHHHH
Q psy2811           1 MSVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-T--KRFDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~~   72 (108)
                      +.|+|||++.     ...++.++|+||+|+++|++++|..||...+..+...++........ +  ....+..+++++++
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~  246 (332)
T cd05623         167 PDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRR  246 (332)
T ss_pred             ccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHH
Confidence            4699999986     24578899999999999999999999988877666665544322111 1  11347789999999


Q ss_pred             HhhcCCC--CCCCHHHHhcCcccccc
Q psy2811          73 CLRKDLE--ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        73 ~l~~~p~--~R~~~~~~l~~~~~~~~   96 (108)
                      |+..++.  .|+++.++++|+||.+.
T Consensus       247 ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         247 LICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             HccChhhhcCCCCHHHHhCCCCcCCC
Confidence            8865443  46899999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0986|consensus

Probab=99.75  E-value=1.9e-18  Score=106.57  Aligned_cols=94  Identities=23%  Similarity=0.213  Sum_probs=75.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      .+|||||++.++.|+.+.|+|++||++|+|+.|..||.....    .+.-.++........  ...+.+++++.+.+|..
T Consensus       350 ~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~--~kFS~eakslc~~LL~K  427 (591)
T KOG0986|consen  350 VGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS--DKFSEEAKSLCEGLLTK  427 (591)
T ss_pred             ccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc--cccCHHHHHHHHHHHcc
Confidence            479999999999999999999999999999999999976533    233344444333332  24578999999999999


Q ss_pred             CCCCCCC-----HHHHhcCcccccc
Q psy2811          77 DLEERPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        77 ~p~~R~~-----~~~~l~~~~~~~~   96 (108)
                      ||++|..     +.++.+||||++.
T Consensus       428 dp~~RLGcrg~ga~evk~HpfFk~l  452 (591)
T KOG0986|consen  428 DPEKRLGCRGEGAQEVKEHPFFKDL  452 (591)
T ss_pred             CHHHhccCCCcCcchhhhCcccccC
Confidence            9999984     6689999999975

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.75  E-value=4.7e-18  Score=103.61  Aligned_cols=96  Identities=25%  Similarity=0.268  Sum_probs=69.4

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhcc---------------------------CCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIP---------------------------RNP   53 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~---------------------------~~~   53 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+.+.......+.                           ...
T Consensus       173 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (337)
T cd07858         173 WYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTP  252 (337)
T ss_pred             CccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCccc
Confidence            4899998765 457889999999999999999999997654322111000                           000


Q ss_pred             CCCC--CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          54 PPQL--TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        54 ~~~~--~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ....  .....+..+.+++++||+.+|++||++.++++|+||....
T Consensus       253 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         253 RQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             ccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            0000  0012356788999999999999999999999999997653

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.75  E-value=1.6e-17  Score=96.38  Aligned_cols=92  Identities=30%  Similarity=0.478  Sum_probs=71.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCC-CCHHHHHhhccCCCCCCCCCcC-CcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSD-LHPMRALFQIPRNPPPQLTKRF-DCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~l~~~p~   79 (108)
                      .|++||.+.+..++.++|+|++|++++++++|..||.. .........+............ .+..+.+++.+|+..+|+
T Consensus       151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~  230 (244)
T smart00220      151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPE  230 (244)
T ss_pred             CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCch
Confidence            58999999888888899999999999999999999977 3433333333332222211111 567888999999999999


Q ss_pred             CCCCHHHHhcCccc
Q psy2811          80 ERPFAKELLRHPLL   93 (108)
Q Consensus        80 ~R~~~~~~l~~~~~   93 (108)
                      +||++.++++|+||
T Consensus       231 ~Rp~~~~~~~~~~~  244 (244)
T smart00220      231 KRLTAEEALQHPFF  244 (244)
T ss_pred             hccCHHHHhhCCCC
Confidence            99999999999996

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.74  E-value=1e-17  Score=100.87  Aligned_cols=88  Identities=19%  Similarity=0.354  Sum_probs=67.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||..........+..............+..+.+++.+||..+|++
T Consensus       208 ~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  287 (302)
T cd05055         208 KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLK  287 (302)
T ss_pred             ccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchh
Confidence            5999999988888999999999999999998 899987765443333322222222222234678999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       288 Rpt~~ell~  296 (302)
T cd05055         288 RPTFKQIVQ  296 (302)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.74  E-value=1.4e-17  Score=98.94  Aligned_cols=92  Identities=27%  Similarity=0.331  Sum_probs=68.2

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC--------------------CCCCCC-C-
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR--------------------NPPPQL-T-   58 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~--------------------~~~~~~-~-   58 (108)
                      .|+|||.+.+. .++.++|+|++|++++++++|..||..........++..                    ...+.. . 
T Consensus       163 ~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (282)
T cd07829         163 WYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPK  242 (282)
T ss_pred             CcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCcc
Confidence            48999998765 778899999999999999999999977654333222110                    000000 0 


Q ss_pred             -----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          59 -----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        59 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                           ....+..+.++++.||..+|++||++.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         243 DLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             chHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence                 00125678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.74  E-value=4.2e-18  Score=103.69  Aligned_cols=97  Identities=24%  Similarity=0.250  Sum_probs=70.2

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC-----------------------CCC--C
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR-----------------------NPP--P   55 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~-----------------------~~~--~   55 (108)
                      .|++||.+.+ ..++.++|+||+|++++++++|..||.+.+.......+..                       ...  .
T Consensus       176 ~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (334)
T cd07855         176 WYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQ  255 (334)
T ss_pred             cccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCC
Confidence            5899998765 4578899999999999999999999976643322111100                       000  0


Q ss_pred             CCC----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          56 QLT----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        56 ~~~----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      ...    ....+..+.+++++||+.+|.+||++.+++.||||.....
T Consensus       256 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~  302 (334)
T cd07855         256 PVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHD  302 (334)
T ss_pred             CCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccC
Confidence            000    0123677899999999999999999999999999975533

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.74  E-value=1.4e-17  Score=98.57  Aligned_cols=87  Identities=22%  Similarity=0.304  Sum_probs=69.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+....... .+...+..+.+++..||..+|.+
T Consensus       173 ~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~c~~~~p~~  251 (266)
T cd05064         173 LWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLP-APRNCPNLLHQLMLDCWQKERGE  251 (266)
T ss_pred             eecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC-CCCCCCHHHHHHHHHHcCCCchh
Confidence            5899999988889999999999999999764 999998877665555544432222 22245678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       252 RP~~~~i~~  260 (266)
T cd05064         252 RPRFSQIHS  260 (266)
T ss_pred             CCCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0577|consensus

Probab=99.74  E-value=4.2e-18  Score=108.32  Aligned_cols=98  Identities=40%  Similarity=0.651  Sum_probs=85.7

Q ss_pred             Cccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      |.|||||++.   .+.|+.++||||+|+...++...++|+-..+.+..+..|.+...+.+....-+..++.|+..||++-
T Consensus       186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKi  265 (948)
T KOG0577|consen  186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKI  265 (948)
T ss_pred             ccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhC
Confidence            5799999986   4669999999999999999999999988888888888887777666665556889999999999999


Q ss_pred             CCCCCCHHHHhcCcccccccc
Q psy2811          78 LEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      |..|||.+++++|+|+....+
T Consensus       266 pqeRptse~ll~H~fv~R~Rp  286 (948)
T KOG0577|consen  266 PQERPTSEELLKHRFVLRERP  286 (948)
T ss_pred             cccCCcHHHHhhcchhccCCC
Confidence            999999999999999976544

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.74  E-value=2.2e-18  Score=101.69  Aligned_cols=87  Identities=22%  Similarity=0.340  Sum_probs=67.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++||||||++++++++ |..|+...+..+....+....... .....+..+.+++..||..+|.+
T Consensus       170 ~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~C~~~~p~~  248 (259)
T PF07714_consen  170 RYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP-IPDNCPKDIYSLIQQCWSHDPEK  248 (259)
T ss_dssp             GGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT-SBTTSBHHHHHHHHHHT-SSGGG
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccce-eccchhHHHHHHHHHHcCCChhh
Confidence            5899999998889999999999999999999 789998877766655554433322 22345788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       249 RPs~~~i~~  257 (259)
T PF07714_consen  249 RPSFQEILQ  257 (259)
T ss_dssp             S--HHHHHH
T ss_pred             CcCHHHHHh
Confidence            999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.74  E-value=1.6e-17  Score=97.71  Aligned_cols=87  Identities=18%  Similarity=0.235  Sum_probs=69.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...+..+....+....... .+...+..+.+++.+||..+|.+
T Consensus       163 ~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~  241 (257)
T cd05060         163 KWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLP-RPEECPQEIYSIMLSCWKYRPED  241 (257)
T ss_pred             cccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHhcCChhh
Confidence            4899999988889999999999999999997 999998776655444443332222 22245678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       242 Rp~~~~l~~  250 (257)
T cd05060         242 RPTFSELES  250 (257)
T ss_pred             CcCHHHHHH
Confidence            999999873

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.74  E-value=1.7e-17  Score=97.55  Aligned_cols=88  Identities=18%  Similarity=0.267  Sum_probs=69.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||......+....+.............+..+.+++..||..+|++
T Consensus       165 ~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  244 (257)
T cd05040         165 AWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPAD  244 (257)
T ss_pred             eecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCccc
Confidence            5999999988889999999999999999998 999998776655544443322222222234678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       245 Rps~~~~~~  253 (257)
T cd05040         245 RPTFAALRE  253 (257)
T ss_pred             CCCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0584|consensus

Probab=99.74  E-value=3.7e-18  Score=108.02  Aligned_cols=94  Identities=22%  Similarity=0.426  Sum_probs=82.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |+|||||... +.|+..+||||||+.+.+|+|+..||... +...++.++..+..+........+++++||.+||.. .+
T Consensus       208 PEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~  285 (632)
T KOG0584|consen  208 PEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KS  285 (632)
T ss_pred             ccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-ch
Confidence            6899999875 88999999999999999999999999876 556677778777766555556688999999999999 99


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      .|+++.|+|.|+||+.-
T Consensus       286 ~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  286 ERLSAKELLKDPFFDED  302 (632)
T ss_pred             hccCHHHHhhChhhccc
Confidence            99999999999999864

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.74  E-value=1.1e-17  Score=99.56  Aligned_cols=92  Identities=24%  Similarity=0.307  Sum_probs=67.7

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCCCC---------------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPPQ---------------------   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~---------------------   56 (108)
                      .|++||.+.+ ..++.++|+|++|++++++++|..||...+.......+..   .....                     
T Consensus       166 ~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (287)
T cd07840         166 WYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYK  245 (287)
T ss_pred             ccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccch
Confidence            4899998765 4568899999999999999999999987665433222211   00000                     


Q ss_pred             -----CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          57 -----LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        57 -----~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                           ......+..+.+++++||..+|.+||++.+++.|+||
T Consensus       246 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         246 RRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             hHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                 0000125678899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.74  E-value=1.9e-17  Score=98.97  Aligned_cols=93  Identities=22%  Similarity=0.279  Sum_probs=66.3

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHhhccC------------------CCCCC----
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIPR------------------NPPPQ----   56 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~-~~~~~~~~------------------~~~~~----   56 (108)
                      +.|++||.+.+ ..++.++|+||+|++++++++|..||...... +.+..+..                  .....    
T Consensus       167 ~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (291)
T cd07870         167 LWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPC  246 (291)
T ss_pred             ccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhcccc
Confidence            35899999875 44778899999999999999999999765421 11111100                  00000    


Q ss_pred             --------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          57 --------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        57 --------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                              .........+.+++.+|+..||++||++.+++.||||
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         247 KPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             CCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence                    0000124578899999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.74  E-value=2.1e-17  Score=97.73  Aligned_cols=88  Identities=18%  Similarity=0.289  Sum_probs=70.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|+++|++++|..||...........+.............+..+.+++.+||..||.+|
T Consensus       178 ~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~R  257 (269)
T cd08528         178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEAR  257 (269)
T ss_pred             cCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccC
Confidence            58999999888889999999999999999999999987766554444444333322222346789999999999999999


Q ss_pred             CCHHHHhc
Q psy2811          82 PFAKELLR   89 (108)
Q Consensus        82 ~~~~~~l~   89 (108)
                      |++.++..
T Consensus       258 p~~~e~~~  265 (269)
T cd08528         258 PDIIQVSA  265 (269)
T ss_pred             CCHHHHHH
Confidence            99999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.73  E-value=2.2e-17  Score=97.27  Aligned_cols=86  Identities=28%  Similarity=0.373  Sum_probs=68.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...+..+....+........ ....+..+.+++.+|+..+|++
T Consensus       168 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~  246 (260)
T cd05070         168 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPC-PQDCPISLHELMLQCWKKDPEE  246 (260)
T ss_pred             cccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCcCCHHHHHHHHHHcccCccc
Confidence            5999999888888999999999999999998 8899987766655555543322221 2234678899999999999999


Q ss_pred             CCCHHHHh
Q psy2811          81 RPFAKELL   88 (108)
Q Consensus        81 R~~~~~~l   88 (108)
                      ||++.++.
T Consensus       247 Rpt~~~l~  254 (260)
T cd05070         247 RPTFEYLQ  254 (260)
T ss_pred             CcCHHHHH
Confidence            99999886

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.73  E-value=1.7e-17  Score=101.11  Aligned_cols=97  Identities=24%  Similarity=0.250  Sum_probs=70.5

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---------------------------C
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---------------------------P   53 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---------------------------~   53 (108)
                      .|++||.+.+ ..++.++|+||+|++++++++|..||.+....+...++...                           .
T Consensus       177 ~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (337)
T cd07852         177 WYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRP  256 (337)
T ss_pred             cccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhccccc
Confidence            5899998765 45678899999999999999999999765543322211100                           0


Q ss_pred             CCCCC--CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          54 PPQLT--KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        54 ~~~~~--~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .....  ....+.++.+++..||+.+|++||++.++++|+|++....
T Consensus       257 ~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~  303 (337)
T cd07852         257 RKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN  303 (337)
T ss_pred             ccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence            00000  0113677889999999999999999999999999977643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.73  E-value=9e-18  Score=102.65  Aligned_cols=97  Identities=27%  Similarity=0.358  Sum_probs=71.1

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC----------------------CCC-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP----------------------PQL-   57 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~----------------------~~~-   57 (108)
                      .|++||.+.+ ..++.++|+||+|++++++++|..||...+.......+.....                      +.. 
T Consensus       180 ~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (343)
T cd07880         180 WYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFR  259 (343)
T ss_pred             cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccC
Confidence            5899999876 4577899999999999999999999987654333222111000                      000 


Q ss_pred             ------CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          58 ------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        58 ------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                            .....+..+.+++.+|++.||++||++.+++.|+||+....
T Consensus       260 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         260 KKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             cchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence                  00123566889999999999999999999999999986533

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.73  E-value=1.5e-17  Score=98.34  Aligned_cols=88  Identities=24%  Similarity=0.364  Sum_probs=70.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+....+....+........+ ...+..+.+++.+||+.+|++
T Consensus       180 ~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  258 (273)
T cd05035         180 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQP-EDCLDELYDLMYSCWRADPKD  258 (273)
T ss_pred             cccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-cCCCHHHHHHHHHHcCCChhh
Confidence            4899999988888999999999999999998 88999877666555555444332222 245678899999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       259 Rp~~~e~~~~  268 (273)
T cd05035         259 RPTFTKLREV  268 (273)
T ss_pred             CcCHHHHHHH
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.73  E-value=1.3e-17  Score=100.54  Aligned_cols=92  Identities=24%  Similarity=0.225  Sum_probs=65.2

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH---------HHhhc---cC-----------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMR---------ALFQI---PR-----------------   51 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~---------~~~~~---~~-----------------   51 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+.....         .+..+   ..                 
T Consensus       180 ~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  259 (316)
T cd07842         180 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYD  259 (316)
T ss_pred             cccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccch
Confidence            5899998876 457889999999999999999999997543211         00000   00                 


Q ss_pred             ----CCCCCCCC-----------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          52 ----NPPPQLTK-----------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        52 ----~~~~~~~~-----------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                          ........           ...+..+.+++.+||..+|++||++.+++.||||
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         260 TLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             hhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                00000000           0234568899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0663|consensus

Probab=99.73  E-value=1.4e-17  Score=99.47  Aligned_cols=95  Identities=24%  Similarity=0.273  Sum_probs=74.3

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCCCC---------------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPPQ---------------------   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~---------------------   56 (108)
                      .|.|||.+.+ ..|+++.|+||+||++.+++.+.+.|.+....+++.+|..   .+...                     
T Consensus       242 WYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~py  321 (419)
T KOG0663|consen  242 WYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPY  321 (419)
T ss_pred             eecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCc
Confidence            5999999888 5589999999999999999999999999877766655521   11000                     


Q ss_pred             --C----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 --L----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 --~----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                        .    .....+....+|++++|.+||.+|.|+++.|+|.||...
T Consensus       322 n~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  322 NNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence              0    000023566799999999999999999999999999875

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.73  E-value=1.5e-17  Score=99.80  Aligned_cols=92  Identities=25%  Similarity=0.245  Sum_probs=67.6

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh---ccCCCCCC---------------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ---IPRNPPPQ---------------------   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~---------------------   56 (108)
                      .|++||.+.+ ..++.++|+|++|++++++++|.+||...+..+....   ......+.                     
T Consensus       182 ~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (302)
T cd07864         182 WYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYR  261 (302)
T ss_pred             CccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccc
Confidence            4899998865 4467899999999999999999999976654332211   11111000                     


Q ss_pred             ----CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          57 ----LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        57 ----~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                          ......+..+.+++.+||..+|.+||++.+++.|+||
T Consensus       262 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         262 RRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             cchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                0001236788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.73  E-value=2.2e-17  Score=99.11  Aligned_cols=88  Identities=19%  Similarity=0.306  Sum_probs=70.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...........+........ +...+..+.+++.+||..+|.+
T Consensus       183 ~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~  261 (297)
T cd05089         183 RWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEK-PRNCDDEVYELMRQCWRDRPYE  261 (297)
T ss_pred             cccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHcCCChhh
Confidence            4999999988888999999999999999997 9999987766555555443322222 2245678899999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.++++.
T Consensus       262 Rp~~~~i~~~  271 (297)
T cd05089         262 RPPFAQISVQ  271 (297)
T ss_pred             CcCHHHHHHH
Confidence            9999999754

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.73  E-value=2e-17  Score=97.48  Aligned_cols=86  Identities=23%  Similarity=0.288  Sum_probs=68.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...........+....... .....+..+.+++.+|+..+|++
T Consensus       169 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  247 (261)
T cd05072         169 KWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMP-RMENCPDELYDIMKTCWKEKAEE  247 (261)
T ss_pred             ecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHccCCccc
Confidence            5999999988888889999999999999998 999998776655555544332221 11234678899999999999999


Q ss_pred             CCCHHHHh
Q psy2811          81 RPFAKELL   88 (108)
Q Consensus        81 R~~~~~~l   88 (108)
                      ||++.++.
T Consensus       248 Rp~~~~i~  255 (261)
T cd05072         248 RPTFDYLQ  255 (261)
T ss_pred             CcCHHHHH
Confidence            99999886

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.73  E-value=1.8e-17  Score=97.56  Aligned_cols=88  Identities=17%  Similarity=0.323  Sum_probs=70.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...+.......+......... ...+..+.+++.+||..+|.+
T Consensus       166 ~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~  244 (256)
T cd05113         166 RWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP-HLASEKVYAIMYSCWHEKAEE  244 (256)
T ss_pred             hhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHcCCCccc
Confidence            4899999988888999999999999999998 99999877665555555444332222 234678899999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++.+
T Consensus       245 Rp~~~~ll~~  254 (256)
T cd05113         245 RPTFQQLLSS  254 (256)
T ss_pred             CCCHHHHHHh
Confidence            9999999854

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0658|consensus

Probab=99.73  E-value=7.5e-18  Score=101.05  Aligned_cols=96  Identities=26%  Similarity=0.320  Sum_probs=75.5

Q ss_pred             ccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC------------CC-------CCC-----
Q psy2811           3 VIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN------------PP-------PQL-----   57 (108)
Q Consensus         3 y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~------------~~-------~~~-----   57 (108)
                      |.|||.+.| ..|+.+.||||.||++.||+.|++.|.|.+..+++..|...            .+       +..     
T Consensus       191 YRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~  270 (364)
T KOG0658|consen  191 YRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPW  270 (364)
T ss_pred             ccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccc
Confidence            899999887 67999999999999999999999999988766554443110            00       000     


Q ss_pred             ---CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          58 ---TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        58 ---~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                         .....+.+..+|+.++|.++|.+|.++.+++.|+||+....
T Consensus       271 ~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~  314 (364)
T KOG0658|consen  271 HKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD  314 (364)
T ss_pred             eeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence               11123678889999999999999999999999999987644

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.73  E-value=6.8e-18  Score=103.26  Aligned_cols=96  Identities=26%  Similarity=0.283  Sum_probs=69.8

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---------------------------C
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---------------------------P   53 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---------------------------~   53 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||...+.......+...                           +
T Consensus       182 ~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (345)
T cd07877         182 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP  261 (345)
T ss_pred             CccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccC
Confidence            5899998766 45788999999999999999999999765443322211100                           0


Q ss_pred             CCCCC--CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          54 PPQLT--KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        54 ~~~~~--~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .....  ....+..+.+++.+|++.+|.+|+++.+++.|+||+...
T Consensus       262 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~  307 (345)
T cd07877         262 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  307 (345)
T ss_pred             CcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcC
Confidence            00000  002356788999999999999999999999999998543

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.73  E-value=2.1e-17  Score=97.59  Aligned_cols=88  Identities=23%  Similarity=0.318  Sum_probs=67.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||....  .......+.....+.......+..+.+++.+||..+|+
T Consensus       171 ~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~  250 (267)
T cd08228         171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPD  250 (267)
T ss_pred             cccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcc
Confidence            5899999988888889999999999999999999986543  22333333333333222223467789999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.++++
T Consensus       251 ~Rp~~~~vl~  260 (267)
T cd08228         251 QRPDIGYVHQ  260 (267)
T ss_pred             cCcCHHHHHH
Confidence            9999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.73  E-value=2.1e-17  Score=97.09  Aligned_cols=88  Identities=19%  Similarity=0.303  Sum_probs=69.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +|++||.+.+..++.++|+||+|++++++++ |..||...........+........ +...+..+.+++.+||..+|++
T Consensus       166 ~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~~  244 (256)
T cd05112         166 KWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK-PRLASQSVYELMQHCWKERPED  244 (256)
T ss_pred             hhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC-CCCCCHHHHHHHHHHcccChhh
Confidence            5899999988888899999999999999998 8999987765555544433322221 2235678999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.++++.
T Consensus       245 Rp~~~~~l~~  254 (256)
T cd05112         245 RPSFSLLLHQ  254 (256)
T ss_pred             CCCHHHHHHh
Confidence            9999999853

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.73  E-value=2.2e-17  Score=98.37  Aligned_cols=88  Identities=16%  Similarity=0.255  Sum_probs=69.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.........+........ ....+..+.+++..||+.+|.+
T Consensus       191 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~  269 (283)
T cd05090         191 RWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPC-SEDCPPRMYSLMTECWQEGPSR  269 (283)
T ss_pred             eecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHcccCccc
Confidence            4999999988888999999999999999998 8889977665544444433332222 2245678899999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       270 Rp~~~~i~~~  279 (283)
T cd05090         270 RPRFKDIHTR  279 (283)
T ss_pred             CcCHHHHHHH
Confidence            9999998753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.73  E-value=1.5e-17  Score=101.25  Aligned_cols=96  Identities=18%  Similarity=0.197  Sum_probs=70.1

Q ss_pred             Ccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC--CCC-CCcCCcHHHHHHHHH
Q psy2811           1 MSVIACEQQLD-----MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP--PQL-TKRFDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~~-----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~l~~~   72 (108)
                      +.|+|||++.+     ..++.++|+||+|+++|++++|..||...+..+....+.....  ... .....+..+++++++
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~  246 (331)
T cd05597         167 PDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRR  246 (331)
T ss_pred             ccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHH
Confidence            46999999863     3467789999999999999999999988776555444433221  111 111246788999999


Q ss_pred             HhhcCCC--CCCCHHHHhcCcccccc
Q psy2811          73 CLRKDLE--ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        73 ~l~~~p~--~R~~~~~~l~~~~~~~~   96 (108)
                      |+..++.  .|+++.++++|+||.+.
T Consensus       247 ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         247 LICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             HccCcccccCCCCHHHHhcCCCCCCC
Confidence            8865443  37899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.73  E-value=6.1e-18  Score=107.84  Aligned_cols=97  Identities=25%  Similarity=0.255  Sum_probs=66.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCC-CCCCC--CHHHHHhhccC------CCCC----------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDP-PLSDL--HPMRALFQIPR------NPPP----------------   55 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~-~~~~~--~~~~~~~~~~~------~~~~----------------   55 (108)
                      +.|+|||++.+..++.++||||+|++++++++|.. |+...  .....+.++..      ...+                
T Consensus       332 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~  411 (501)
T PHA03210        332 VATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEID  411 (501)
T ss_pred             cCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcc
Confidence            36899999999999999999999999999998764 44322  11111111110      0000                


Q ss_pred             --------CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          56 --------QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        56 --------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                              .......+..+.+++.+||+.||++||++.|++.||||....
T Consensus       412 ~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        412 HAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             cCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence                    000011234567789999999999999999999999998754

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.73  E-value=1.9e-17  Score=100.81  Aligned_cols=96  Identities=27%  Similarity=0.264  Sum_probs=69.7

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---------------------------CC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---------------------------NP   53 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---------------------------~~   53 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|.+||...+.......+..                           ..
T Consensus       174 ~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (332)
T cd07857         174 WYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIP  253 (332)
T ss_pred             cccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccC
Confidence            5899998765 5678899999999999999999999976553322211100                           00


Q ss_pred             CCCCC--CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          54 PPQLT--KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        54 ~~~~~--~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .....  ....+..+.+++.+||+.+|++||++.+++.|+|++.-.
T Consensus       254 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         254 KKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             CcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence            00000  012356788999999999999999999999999997543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0659|consensus

Probab=99.73  E-value=2.3e-17  Score=95.92  Aligned_cols=95  Identities=24%  Similarity=0.297  Sum_probs=73.5

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCC---------------------CC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPP---------------------PQ   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~---------------------~~   56 (108)
                      .|.|||.+.| ..|+..+|+||.||++.|++-+.+-|.+.+..+++..|..   .+.                     +.
T Consensus       166 WYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~  245 (318)
T KOG0659|consen  166 WYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPP  245 (318)
T ss_pred             eccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCc
Confidence            4899999887 5589999999999999999999999988877666544411   110                     00


Q ss_pred             CCCc--CCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 LTKR--FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ~~~~--~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ....  ..+....+|+.+++..+|.+|+++.|+++|+||+..
T Consensus       246 ~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  246 LNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             cccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence            0000  125566799999999999999999999999999864

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.73  E-value=2.4e-17  Score=97.60  Aligned_cols=87  Identities=22%  Similarity=0.307  Sum_probs=69.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.........+..+...... ......+.+++.+||..+|.+
T Consensus       179 ~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  257 (272)
T cd05075         179 KWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQP-PDCLDGLYSLMSSCWLLNPKD  257 (272)
T ss_pred             ccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcCCCccc
Confidence            5899999988888999999999999999998 88999877665555544443322222 234677899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       258 Rps~~~l~~  266 (272)
T cd05075         258 RPSFETLRC  266 (272)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.73  E-value=2.5e-17  Score=96.89  Aligned_cols=87  Identities=18%  Similarity=0.278  Sum_probs=69.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+......... ...+..+.+++.+|+..+|.+
T Consensus       164 ~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  242 (256)
T cd05082         164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP-DGCPPVVYDVMKQCWHLDAAT  242 (256)
T ss_pred             eecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHhcCChhh
Confidence            5999999988889999999999999999997 99999877665555544443222222 245778899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       243 Rpt~~~l~~  251 (256)
T cd05082         243 RPSFLQLRE  251 (256)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.73  E-value=3.1e-17  Score=97.00  Aligned_cols=87  Identities=22%  Similarity=0.358  Sum_probs=68.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...+..+....+........ ....+..+.+++.+||..+|++
T Consensus       178 ~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~  256 (269)
T cd05044         178 RWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQK-PENCPDKIYQLMTNCWAQDPSE  256 (269)
T ss_pred             cccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCC-cccchHHHHHHHHHHcCCCccc
Confidence            5899999988888999999999999999998 9999987766555544433322221 2234678889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       257 Rp~~~~i~~  265 (269)
T cd05044         257 RPTFDRIQE  265 (269)
T ss_pred             CCCHHHHHH
Confidence            999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.73  E-value=2.7e-17  Score=96.77  Aligned_cols=88  Identities=17%  Similarity=0.275  Sum_probs=70.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||......+....+........ +...+..+.+++.+||..+|++
T Consensus       166 ~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~  244 (256)
T cd05059         166 KWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYR-PKLAPTEVYTIMYSCWHEKPED  244 (256)
T ss_pred             cccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCC-CCCCCHHHHHHHHHHhcCChhh
Confidence            5999999988889999999999999999998 7899987666555544443322221 2245778999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.++++.
T Consensus       245 Rpt~~~~l~~  254 (256)
T cd05059         245 RPAFKKLLSQ  254 (256)
T ss_pred             CcCHHHHHHH
Confidence            9999999853

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.73  E-value=2.6e-17  Score=97.04  Aligned_cols=87  Identities=20%  Similarity=0.230  Sum_probs=70.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+..+.....+ ...+.++.+++..||..+|++
T Consensus       163 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~c~~~~~~~  241 (257)
T cd05115         163 KWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCP-AECPPEMYALMKDCWIYKWED  241 (257)
T ss_pred             ccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHcCCChhh
Confidence            5899999988888889999999999999986 99999887766655555444333222 245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++.+
T Consensus       242 Rp~~~~i~~  250 (257)
T cd05115         242 RPNFAKVEE  250 (257)
T ss_pred             CcCHHHHHH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.73  E-value=4.2e-17  Score=96.17  Aligned_cols=87  Identities=23%  Similarity=0.322  Sum_probs=69.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.........+...... ......+..+.+++.+|++.+|.+
T Consensus       169 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~  247 (261)
T cd05068         169 KWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM-PCPPGCPKELYDIMLDCWKEDPDD  247 (261)
T ss_pred             eccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-CCCCcCCHHHHHHHHHHhhcCccc
Confidence            5999999988888999999999999999998 99999887665555444333221 122234678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++..
T Consensus       248 Rp~~~~l~~  256 (261)
T cd05068         248 RPTFETLQW  256 (261)
T ss_pred             CCCHHHHHH
Confidence            999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.73  E-value=3.2e-17  Score=97.87  Aligned_cols=87  Identities=16%  Similarity=0.260  Sum_probs=69.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+....+....+..+...... ...+.++.+++.+||+.+|++
T Consensus       197 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  275 (288)
T cd05050         197 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCP-DNCPLELYNLMRLCWSKLPSD  275 (288)
T ss_pred             hhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHcccCccc
Confidence            4999999988889999999999999999997 87888777666655555444332222 234678999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       276 Rpt~~el~~  284 (288)
T cd05050         276 RPSFASINR  284 (288)
T ss_pred             CCCHHHHHH
Confidence            999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.73  E-value=3e-17  Score=96.74  Aligned_cols=87  Identities=22%  Similarity=0.370  Sum_probs=67.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |.+||...+..+....+......... ...+..+.+++..||..+|++
T Consensus       167 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~  245 (262)
T cd05058         167 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQP-EYCPDPLYEVMLSCWHPKPEM  245 (262)
T ss_pred             cccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC-CcCCHHHHHHHHHHcCCChhh
Confidence            5899999988888999999999999999998 56777766655544444443322222 234678889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       246 Rp~~~~il~  254 (262)
T cd05058         246 RPTFSELVS  254 (262)
T ss_pred             CCCHHHHHH
Confidence            999999974

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.73  E-value=5.9e-18  Score=112.65  Aligned_cols=92  Identities=16%  Similarity=0.160  Sum_probs=67.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|+|||++.+..++.++||||+|+++|+|++|..++.....  ....+.....+... .........++.+||+.+|.+|
T Consensus       180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~P~~R  256 (793)
T PLN00181        180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLPPQI-LLNWPKEASFCLWLLHPEPSCR  256 (793)
T ss_pred             ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcChhh-hhcCHHHHHHHHHhCCCChhhC
Confidence            49999999999999999999999999999998887654321  11111111111110 1123455688899999999999


Q ss_pred             CCHHHHhcCcccccc
Q psy2811          82 PFAKELLRHPLLKKG   96 (108)
Q Consensus        82 ~~~~~~l~~~~~~~~   96 (108)
                      |++.++++||||...
T Consensus       257 ps~~eil~h~~~~~~  271 (793)
T PLN00181        257 PSMSELLQSEFINEP  271 (793)
T ss_pred             cChHHHhhchhhhhh
Confidence            999999999999764

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.73  E-value=2.9e-17  Score=97.72  Aligned_cols=92  Identities=30%  Similarity=0.437  Sum_probs=66.6

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCC------------------CCC--
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPP------------------PQL--   57 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~------------------~~~--   57 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..+|......+...++..   ...                  +..  
T Consensus       163 ~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T cd07830         163 WYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAP  242 (283)
T ss_pred             cccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccc
Confidence            4899998754 4568899999999999999999999876654332221110   000                  000  


Q ss_pred             ---C--CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          58 ---T--KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        58 ---~--~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                         .  ....+..+.+++++||..+|++||++.+++.|+||
T Consensus       243 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         243 TSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence               0  00124678899999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.73  E-value=2.9e-17  Score=96.43  Aligned_cols=88  Identities=23%  Similarity=0.348  Sum_probs=70.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+......... ...+..+.+++.+||..+|++
T Consensus       172 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  250 (262)
T cd00192         172 RWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKP-EYCPDELYELMLSCWQLDPED  250 (262)
T ss_pred             cccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC-ccCChHHHHHHHHHccCCccc
Confidence            5899999988888999999999999999998 69999887666555555443222222 244778999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       251 Rps~~~l~~~  260 (262)
T cd00192         251 RPTFSELVER  260 (262)
T ss_pred             CcCHHHHHHh
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.72  E-value=3.5e-17  Score=96.43  Aligned_cols=87  Identities=21%  Similarity=0.271  Sum_probs=68.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.+..+....+....... .....+.++.+++.+||..+|++
T Consensus       168 ~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  246 (260)
T cd05067         168 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMP-RPDNCPEELYELMRLCWKEKPEE  246 (260)
T ss_pred             cccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHccCChhh
Confidence            5999999988888889999999999999998 999998776655444443332221 22234678999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||+++++..
T Consensus       247 Rp~~~~l~~  255 (260)
T cd05067         247 RPTFEYLRS  255 (260)
T ss_pred             CCCHHHHHH
Confidence            999998863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.72  E-value=2.9e-17  Score=98.13  Aligned_cols=92  Identities=21%  Similarity=0.268  Sum_probs=65.3

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhc---cCCC------------------CCC--
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQI---PRNP------------------PPQ--   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~---~~~~------------------~~~--   56 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.... ..+....+   ...+                  ...  
T Consensus       168 ~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (291)
T cd07844         168 WYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYP  247 (291)
T ss_pred             ccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccC
Confidence            5899998865 457889999999999999999999997654 22111111   0000                  000  


Q ss_pred             -------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccc
Q psy2811          57 -------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLL   93 (108)
Q Consensus        57 -------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~   93 (108)
                             .........+.+++.+||..+|++||++.+++.|+||
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         248 PRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                   0000112667799999999999999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.72  E-value=3.2e-17  Score=96.19  Aligned_cols=87  Identities=20%  Similarity=0.240  Sum_probs=67.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...........+....... .....+..+.+++.+||+.+|++
T Consensus       161 ~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  239 (252)
T cd05084         161 KWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLP-CPELCPDAVYRLMERCWEYDPGQ  239 (252)
T ss_pred             eecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCC-CcccCCHHHHHHHHHHcCCChhh
Confidence            4999999988888999999999999999997 888887665544433333322222 22244678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       240 Rps~~~~~~  248 (252)
T cd05084         240 RPSFSTVHQ  248 (252)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.72  E-value=3.6e-17  Score=96.32  Aligned_cols=87  Identities=22%  Similarity=0.275  Sum_probs=69.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+|++|++++++++ |..||...+..+....+...... ......+..+.+++.+||+.+|++
T Consensus       169 ~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~p~~  247 (261)
T cd05148         169 KWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRM-PCPAKCPQEIYKIMLECWAAEPED  247 (261)
T ss_pred             EecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcC-CCCCCCCHHHHHHHHHHcCCCchh
Confidence            5899999988888899999999999999998 89999877665555554433222 222245678889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++.+
T Consensus       248 Rpt~~~l~~  256 (261)
T cd05148         248 RPSFKALRE  256 (261)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.72  E-value=5.2e-17  Score=95.16  Aligned_cols=87  Identities=22%  Similarity=0.203  Sum_probs=68.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...........+........ ....+..+.+++.+|+..+|++
T Consensus       159 ~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~  237 (250)
T cd05085         159 KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSC-PQKCPDDVYKVMQRCWDYKPEN  237 (250)
T ss_pred             cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcccCccc
Confidence            5999999988888889999999999999998 8999987765554444433322211 2234678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       238 Rp~~~~l~~  246 (250)
T cd05085         238 RPKFSELQK  246 (250)
T ss_pred             CCCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.72  E-value=4.8e-17  Score=95.91  Aligned_cols=87  Identities=25%  Similarity=0.324  Sum_probs=69.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||...+..++.++|+||+|++++++++ |..||.+....+....+........ ....+..+.+++.+||..+|.+
T Consensus       168 ~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~  246 (260)
T cd05069         168 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPC-PQGCPESLHELMKLCWKKDPDE  246 (260)
T ss_pred             hhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CcccCHHHHHHHHHHccCCccc
Confidence            4999999888888999999999999999998 8999988766555544443322211 2245678999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       247 Rp~~~~i~~  255 (260)
T cd05069         247 RPTFEYIQS  255 (260)
T ss_pred             CcCHHHHHH
Confidence            999998873

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.72  E-value=1.9e-17  Score=99.03  Aligned_cols=88  Identities=19%  Similarity=0.327  Sum_probs=69.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||......+....+....... .+...+..+.+++.+||..+|.+
T Consensus       199 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  277 (293)
T cd05053         199 KWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRME-KPQNCTQELYHLMRDCWHEVPSQ  277 (293)
T ss_pred             cccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHcccCccc
Confidence            5999999988889999999999999999987 889998776655544443332222 22244678889999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       278 Rps~~eil~~  287 (293)
T cd05053         278 RPTFKQLVED  287 (293)
T ss_pred             CcCHHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.72  E-value=3.9e-17  Score=97.13  Aligned_cols=87  Identities=23%  Similarity=0.346  Sum_probs=69.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...+..+....+....... .....+..+.+++.+||..+|++
T Consensus       184 ~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  262 (280)
T cd05043         184 KWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLA-QPINCPDELFAVMACCWALDPEE  262 (280)
T ss_pred             hccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCC-CCCcCCHHHHHHHHHHcCCChhh
Confidence            4899999988888999999999999999998 999998776655544443332221 12234678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       263 Rps~~~~~~  271 (280)
T cd05043         263 RPSFSQLVQ  271 (280)
T ss_pred             CCCHHHHHH
Confidence            999999873

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.72  E-value=4e-17  Score=96.89  Aligned_cols=87  Identities=21%  Similarity=0.295  Sum_probs=69.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+........+ ...+..+.+++.+||+.+|++
T Consensus       186 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  264 (277)
T cd05032         186 RWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLP-ENCPDKLLELMRMCWQYNPKM  264 (277)
T ss_pred             cccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHcCCChhh
Confidence            5899999988888999999999999999998 89999877665555444433322222 234778899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       265 Rpt~~~l~~  273 (277)
T cd05032         265 RPTFLEIVS  273 (277)
T ss_pred             CCCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.72  E-value=4.9e-17  Score=96.06  Aligned_cols=87  Identities=25%  Similarity=0.327  Sum_probs=66.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP--MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||.+...  .....++.....+.......+..+.+++.+||..+|+
T Consensus       171 ~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  250 (267)
T cd08229         171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPE  250 (267)
T ss_pred             CccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcc
Confidence            58999999888888899999999999999999999865432  2223333333323222234567899999999999999


Q ss_pred             CCCCHHHHh
Q psy2811          80 ERPFAKELL   88 (108)
Q Consensus        80 ~R~~~~~~l   88 (108)
                      +||++.+|+
T Consensus       251 ~Rpt~~~i~  259 (267)
T cd08229         251 KRPDITYVY  259 (267)
T ss_pred             cCCCHHHHH
Confidence            999999776

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG4257|consensus

Probab=99.72  E-value=1.7e-17  Score=106.07  Aligned_cols=87  Identities=16%  Similarity=0.242  Sum_probs=75.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||||.+...+++.++|||.||+.+|+++. |..||.+..+.+.+..+.++...+.++ .+++.+..++.+||.++|.
T Consensus       556 IKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~-nCPp~LYslmskcWayeP~  634 (974)
T KOG4257|consen  556 IKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPP-NCPPALYSLMSKCWAYEPS  634 (974)
T ss_pred             eeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCC-CCChHHHHHHHHHhccCcc
Confidence            46999999999999999999999999999875 999999998888888887776554444 5677788999999999999


Q ss_pred             CCCCHHHHh
Q psy2811          80 ERPFAKELL   88 (108)
Q Consensus        80 ~R~~~~~~l   88 (108)
                      +||.+.++.
T Consensus       635 kRPrftei~  643 (974)
T KOG4257|consen  635 KRPRFTEIK  643 (974)
T ss_pred             cCCcHHHHH
Confidence            999988875

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.72  E-value=3.2e-17  Score=99.73  Aligned_cols=99  Identities=26%  Similarity=0.327  Sum_probs=70.9

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh---------------------------ccCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ---------------------------IPRNP   53 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~---------------------------~~~~~   53 (108)
                      .|++||.+.+ ..++.++|+|++|++++++++|..||...........                           .....
T Consensus       170 ~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (328)
T cd07856         170 YYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKRE  249 (328)
T ss_pred             cccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccC
Confidence            5899998765 5678899999999999999999999976543211100                           00000


Q ss_pred             CCCCC--CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccccc
Q psy2811          54 PPQLT--KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        54 ~~~~~--~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      .....  ....+..+.+++++||+.+|++||++.+++.|+|+.......
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~  298 (328)
T cd07856         250 PVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPT  298 (328)
T ss_pred             CCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCc
Confidence            00000  012356788999999999999999999999999997655443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.72  E-value=5.3e-17  Score=98.15  Aligned_cols=87  Identities=22%  Similarity=0.305  Sum_probs=69.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+....+....+........ ....+..+.+++.+||..+|++
T Consensus       201 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~  279 (314)
T cd05099         201 KWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDK-PSNCTHELYMLMRECWHAVPTQ  279 (314)
T ss_pred             cccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCccc
Confidence            5999999988888999999999999999998 8889987766555554444322221 2234678889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       280 Rps~~~ll~  288 (314)
T cd05099         280 RPTFKQLVE  288 (314)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.72  E-value=4.7e-17  Score=96.19  Aligned_cols=88  Identities=20%  Similarity=0.300  Sum_probs=69.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...........+....... .....+..+.+++.+||+.+|++
T Consensus       173 ~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~  251 (266)
T cd05033         173 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLP-PPMDCPSALYQLMLDCWQKDRNE  251 (266)
T ss_pred             cccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHcCCCccc
Confidence            5999999988889999999999999999987 999987766555544444332211 12245778899999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       252 Rp~~~ei~~~  261 (266)
T cd05033         252 RPTFSQIVST  261 (266)
T ss_pred             CcCHHHHHHH
Confidence            9999999753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.71  E-value=2.5e-17  Score=96.11  Aligned_cols=86  Identities=20%  Similarity=0.203  Sum_probs=65.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..++.......     ........ +...+..+++++.+||+.||++|
T Consensus       147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~R  220 (237)
T cd05576         147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-----NTHTTLNI-PEWVSEEARSLLQQLLQFNPTER  220 (237)
T ss_pred             cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----ccccccCC-cccCCHHHHHHHHHHccCCHHHh
Confidence            4899999888888889999999999999999987765432110     00000011 12346788999999999999999


Q ss_pred             CCH-----HHHhcCccc
Q psy2811          82 PFA-----KELLRHPLL   93 (108)
Q Consensus        82 ~~~-----~~~l~~~~~   93 (108)
                      +++     ++++.||||
T Consensus       221 ~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         221 LGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             cCCCccchHHHHcCCCC
Confidence            985     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.71  E-value=4.8e-17  Score=98.04  Aligned_cols=88  Identities=19%  Similarity=0.295  Sum_probs=69.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.+..+....+....... .+...+.++.+++.+||..+|++
T Consensus       207 ~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  285 (307)
T cd05098         207 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD-KPSNCTNELYMMMRDCWHAVPSQ  285 (307)
T ss_pred             ceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCC-CCCcCCHHHHHHHHHHcccChhh
Confidence            5999999988888999999999999999998 888887766554444433332222 22245678889999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       286 Rps~~evl~~  295 (307)
T cd05098         286 RPTFKQLVED  295 (307)
T ss_pred             CcCHHHHHHH
Confidence            9999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0199|consensus

Probab=99.71  E-value=2.7e-17  Score=106.18  Aligned_cols=95  Identities=16%  Similarity=0.288  Sum_probs=80.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+....|+.++|+|++|+.+|+|++ |..||.+.....++.+|..+ .....+..++..+.++++.||..+|.+
T Consensus       280 AWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~-erLpRPk~csedIY~imk~cWah~paD  358 (1039)
T KOG0199|consen  280 AWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG-ERLPRPKYCSEDIYQIMKNCWAHNPAD  358 (1039)
T ss_pred             cccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc-ccCCCCCCChHHHHHHHHHhccCCccc
Confidence            5899999999999999999999999999997 88999999999888888743 333444467889999999999999999


Q ss_pred             CCCHHHHhcCccccccc
Q psy2811          81 RPFAKELLRHPLLKKGA   97 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~   97 (108)
                      ||+|..|...-+.....
T Consensus       359 RptFsair~~~~l~eaq  375 (1039)
T KOG0199|consen  359 RPTFSAIREDLVLAEAQ  375 (1039)
T ss_pred             cccHHHHHHhHHHHhcC
Confidence            99999987655554443

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.71  E-value=6.9e-17  Score=95.43  Aligned_cols=87  Identities=29%  Similarity=0.340  Sum_probs=68.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||...+..++.++|+||+|++++++++ |..||...........+........ ....+..+.+++.+|++.+|++
T Consensus       168 ~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~  246 (262)
T cd05071         168 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEE  246 (262)
T ss_pred             eecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCC-ccccCHHHHHHHHHHccCCccc
Confidence            4999999988889999999999999999999 8889987765555544433322211 2234678889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       247 Rp~~~~~~~  255 (262)
T cd05071         247 RPTFEYLQA  255 (262)
T ss_pred             CCCHHHHHH
Confidence            999998863

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.71  E-value=5.3e-17  Score=96.58  Aligned_cols=87  Identities=22%  Similarity=0.314  Sum_probs=68.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|+++|++++ |..||...........+........ ....+..+.+++..||..||.+
T Consensus       176 ~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~  254 (279)
T cd05109         176 KWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ-PPICTIDVYMIMVKCWMIDSEC  254 (279)
T ss_pred             hhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC-CccCCHHHHHHHHHHcCCChhh
Confidence            5999999988889999999999999999987 8899977655443333333222222 2245778899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       255 Rp~~~~l~~  263 (279)
T cd05109         255 RPRFRELVD  263 (279)
T ss_pred             CcCHHHHHH
Confidence            999999983

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0200|consensus

Probab=99.71  E-value=3.7e-17  Score=106.21  Aligned_cols=86  Identities=22%  Similarity=0.364  Sum_probs=70.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCC-HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|||||.+.+..|+.++||||+|+++|++++ |..|+.+.. ..+....+..+ .....+...+.++.++|+.||+.+|+
T Consensus       486 kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G-~r~~~P~~c~~eiY~iM~~CW~~~p~  564 (609)
T KOG0200|consen  486 KWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEG-NRMEQPEHCSDEIYDLMKSCWNADPE  564 (609)
T ss_pred             eecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHhCCCcc
Confidence            5999999999999999999999999999987 889998865 44444434333 33334446688999999999999999


Q ss_pred             CCCCHHHHh
Q psy2811          80 ERPFAKELL   88 (108)
Q Consensus        80 ~R~~~~~~l   88 (108)
                      +||++.++.
T Consensus       565 ~RP~F~~~~  573 (609)
T KOG0200|consen  565 DRPTFSECV  573 (609)
T ss_pred             cCCCHHHHH
Confidence            999998876

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.71  E-value=7.2e-17  Score=95.43  Aligned_cols=87  Identities=18%  Similarity=0.262  Sum_probs=68.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||......+....+..... .......+..+.+++.+||..+|.+
T Consensus       175 ~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~~c~~~~p~~  253 (268)
T cd05063         175 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFR-LPAPMDCPSAVYQLMLQCWQQDRAR  253 (268)
T ss_pred             eecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCCccc
Confidence            4899999988888999999999999999987 9999977666555544443321 1122234678889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       254 Rp~~~~i~~  262 (268)
T cd05063         254 RPRFVDIVN  262 (268)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.71  E-value=8e-17  Score=95.94  Aligned_cols=87  Identities=23%  Similarity=0.331  Sum_probs=67.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|+++|++++ |..||.+.........+..+..... .........+++.+||..+|.+
T Consensus       176 ~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~c~~~~p~~  254 (279)
T cd05111         176 KWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ-PQICTIDVYMVMVKCWMIDENV  254 (279)
T ss_pred             cccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC-CCCCCHHHHHHHHHHcCCCccc
Confidence            5899999988889999999999999999998 9999987665443333333322222 2234567788999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       255 Rps~~el~~  263 (279)
T cd05111         255 RPTFKELAN  263 (279)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.71  E-value=7.4e-17  Score=94.55  Aligned_cols=87  Identities=22%  Similarity=0.264  Sum_probs=67.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...........+.... ....+...+..+.+++.+||..+|.+
T Consensus       160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~  238 (251)
T cd05041         160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RMPAPQLCPEEIYRLMLQCWAYDPEN  238 (251)
T ss_pred             ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHhccChhh
Confidence            4899999988888999999999999999998 888887766544444433221 11122245678999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       239 Rp~~~ell~  247 (251)
T cd05041         239 RPSFSEIYN  247 (251)
T ss_pred             CcCHHHHHH
Confidence            999999974

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.71  E-value=4.6e-17  Score=98.46  Aligned_cols=88  Identities=22%  Similarity=0.335  Sum_probs=68.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|+++|++++ |..||.+....+....+.... ........+..+.+++..||..+|.+
T Consensus       176 ~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~  254 (316)
T cd05108         176 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RLPQPPICTIDVYMIMVKCWMIDADS  254 (316)
T ss_pred             eecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHHccCChhh
Confidence            5999999988889999999999999999987 999998776544333222222 11222245678889999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++.+
T Consensus       255 Rps~~~l~~~  264 (316)
T cd05108         255 RPKFRELIIE  264 (316)
T ss_pred             CcCHHHHHHH
Confidence            9999999864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG2345|consensus

Probab=99.71  E-value=1.5e-17  Score=95.96  Aligned_cols=88  Identities=23%  Similarity=0.265  Sum_probs=64.7

Q ss_pred             cccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQLD---MSYDARCDIWSLGITAIELAEGDPPLSDLHPMR--ALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~~---~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      -|.|||.+.-   ...+.++||||+||++|.++.|..||...-...  ....+..+....+.....+..+.++++.|++.
T Consensus       203 pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqv  282 (302)
T KOG2345|consen  203 PYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQV  282 (302)
T ss_pred             cccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcC
Confidence            5899999864   345679999999999999999999996432211  11122333333333334578888999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy2811          77 DLEERPFAKELLR   89 (108)
Q Consensus        77 ~p~~R~~~~~~l~   89 (108)
                      ||.+||++.+++.
T Consensus       283 dP~qRP~i~~ll~  295 (302)
T KOG2345|consen  283 DPNQRPTIPELLS  295 (302)
T ss_pred             CcccCCCHHHHHH
Confidence            9999999999875

>KOG1024|consensus

Probab=99.71  E-value=4.9e-17  Score=99.25  Aligned_cols=87  Identities=21%  Similarity=0.274  Sum_probs=75.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .||++|.+.+..|+..+|+||||+++|++.+ |+.|+...++.+....+..+ .+...+..++.++..+|.-||...|+.
T Consensus       463 kWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdG-yRlaQP~NCPDeLf~vMacCWallpee  541 (563)
T KOG1024|consen  463 KWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDG-YRLAQPFNCPDELFTVMACCWALLPEE  541 (563)
T ss_pred             cccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhcc-ceecCCCCCcHHHHHHHHHHHhcCccc
Confidence            5999999999999999999999999999987 89999999988876666544 333344467899999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||+++|++.
T Consensus       542 RPsf~Qlv~  550 (563)
T KOG1024|consen  542 RPSFSQLVI  550 (563)
T ss_pred             CCCHHHHHH
Confidence            999999874

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.71  E-value=1.9e-17  Score=100.79  Aligned_cols=96  Identities=16%  Similarity=0.201  Sum_probs=71.5

Q ss_pred             Ccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCC--cCCcHHHHHHHHH
Q psy2811           1 MSVIACEQQLD-----MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTK--RFDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~~-----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~   72 (108)
                      +.|+|||++.+     ..++.++|+||+|+++|++++|..||...+..+...++....... .+.  ...+..+++++.+
T Consensus       167 ~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~  246 (331)
T cd05624         167 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQR  246 (331)
T ss_pred             cccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHH
Confidence            46999999875     457789999999999999999999998877666555544332111 111  1236789999999


Q ss_pred             HhhcCCCC--CCCHHHHhcCcccccc
Q psy2811          73 CLRKDLEE--RPFAKELLRHPLLKKG   96 (108)
Q Consensus        73 ~l~~~p~~--R~~~~~~l~~~~~~~~   96 (108)
                      |+..+++.  |++++++++|+||+..
T Consensus       247 ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         247 LICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             HccCchhhcCCCCHHHHhcCCCcCCC
Confidence            98865543  4689999999999764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.71  E-value=6.4e-17  Score=95.89  Aligned_cols=87  Identities=21%  Similarity=0.302  Sum_probs=67.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.+..+....+........ ....+..+.+++.+||..+|.+
T Consensus       176 ~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~  254 (270)
T cd05047         176 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK-PLNCDDEVYDLMRQCWREKPYE  254 (270)
T ss_pred             ccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCC-CCcCCHHHHHHHHHHcccChhh
Confidence            4999999988888999999999999999996 9999977665544444433221111 1234567889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       255 Rps~~~il~  263 (270)
T cd05047         255 RPSFAQILV  263 (270)
T ss_pred             CCCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.70  E-value=1.1e-16  Score=94.24  Aligned_cols=86  Identities=27%  Similarity=0.309  Sum_probs=69.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.........+......... ...+..+.+++.+|+..+|++
T Consensus       169 ~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~  247 (261)
T cd05034         169 KWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRP-PNCPEELYDLMLQCWDKDPEE  247 (261)
T ss_pred             cccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcccCccc
Confidence            5899999988888999999999999999998 99999877665555555443222212 234678899999999999999


Q ss_pred             CCCHHHHh
Q psy2811          81 RPFAKELL   88 (108)
Q Consensus        81 R~~~~~~l   88 (108)
                      ||++.++.
T Consensus       248 Rp~~~~l~  255 (261)
T cd05034         248 RPTFEYLQ  255 (261)
T ss_pred             CCCHHHHH
Confidence            99999886

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.70  E-value=9.9e-17  Score=96.51  Aligned_cols=88  Identities=19%  Similarity=0.294  Sum_probs=69.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++|+||+|++++++++ |..||.+....+....+....... .....+..+.+++.+||..+|.+
T Consensus       204 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~  282 (304)
T cd05101         204 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMD-KPANCTNELYMMMRDCWHAIPSH  282 (304)
T ss_pred             eeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCC-CCCCCCHHHHHHHHHHcccChhh
Confidence            5999999988889999999999999999998 788887776665555544332222 22245678999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.++++.
T Consensus       283 Rps~~e~l~~  292 (304)
T cd05101         283 RPTFKQLVED  292 (304)
T ss_pred             CCCHHHHHHH
Confidence            9999999853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.70  E-value=1.2e-16  Score=94.71  Aligned_cols=87  Identities=18%  Similarity=0.247  Sum_probs=69.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+....++.++|+||+|++++++++ |..||......+....+..+...... ...+..+.+++.+|+..+|.+
T Consensus       173 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~  251 (270)
T cd05056         173 KWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMP-PNCPPTLYSLMTKCWAYDPSK  251 (270)
T ss_pred             cccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCC-CCCCHHHHHHHHHHcCCChhh
Confidence            5999999988888999999999999999886 99999887665555554443322222 244678999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       252 Rpt~~~~~~  260 (270)
T cd05056         252 RPRFTELKA  260 (270)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.70  E-value=1e-16  Score=94.48  Aligned_cols=86  Identities=21%  Similarity=0.271  Sum_probs=68.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.+..+....+....... .....+.++.+++.+|++.+|++
T Consensus       168 ~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~  246 (260)
T cd05073         168 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP-RPENCPEELYNIMMRCWKNRPEE  246 (260)
T ss_pred             cccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCC-CcccCCHHHHHHHHHHcccCccc
Confidence            4899999988888889999999999999998 899998876655544443332222 12245678899999999999999


Q ss_pred             CCCHHHHh
Q psy2811          81 RPFAKELL   88 (108)
Q Consensus        81 R~~~~~~l   88 (108)
                      ||++.+++
T Consensus       247 Rp~~~~l~  254 (260)
T cd05073         247 RPTFEYIQ  254 (260)
T ss_pred             CcCHHHHH
Confidence            99998876

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.70  E-value=1.2e-16  Score=95.57  Aligned_cols=87  Identities=18%  Similarity=0.379  Sum_probs=68.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.........+.... ........+..+.+++..||+.+|.+
T Consensus       194 ~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~cl~~~P~~  272 (290)
T cd05045         194 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY-RMERPENCSEEMYNLMLTCWKQEPDK  272 (290)
T ss_pred             cccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC-CCCCCCCCCHHHHHHHHHHccCCccc
Confidence            5899999888888999999999999999998 999998776655444333221 11122245678999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       273 Rp~~~~i~~  281 (290)
T cd05045         273 RPTFADISK  281 (290)
T ss_pred             CCCHHHHHH
Confidence            999999873

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.70  E-value=5.3e-17  Score=97.75  Aligned_cols=88  Identities=20%  Similarity=0.306  Sum_probs=68.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...+..+....+....... .....+..+.+++.+||..+|++
T Consensus       188 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  266 (303)
T cd05088         188 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE-KPLNCDDEVYDLMRQCWREKPYE  266 (303)
T ss_pred             cccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCC-CCCCCCHHHHHHHHHHcCCChhh
Confidence            4899999988888899999999999999998 999998766555444443322111 11234677889999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++..
T Consensus       267 Rp~~~~il~~  276 (303)
T cd05088         267 RPSFAQILVS  276 (303)
T ss_pred             CcCHHHHHHH
Confidence            9999998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.70  E-value=1e-16  Score=97.68  Aligned_cols=88  Identities=20%  Similarity=0.294  Sum_probs=70.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.+..+....+........ ....+.++.+++.+||+.+|.+
T Consensus       201 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~~p~~  279 (334)
T cd05100         201 KWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK-PANCTHELYMIMRECWHAVPSQ  279 (334)
T ss_pred             eEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcccChhh
Confidence            4999999988889999999999999999998 8889987776655554443322222 2244678889999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++.+
T Consensus       280 Rps~~ell~~  289 (334)
T cd05100         280 RPTFKQLVED  289 (334)
T ss_pred             CcCHHHHHHH
Confidence            9999999865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.70  E-value=1.4e-16  Score=93.98  Aligned_cols=88  Identities=26%  Similarity=0.359  Sum_probs=66.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..||....  .......+..+.....+....+..+.+++.+||..+|+
T Consensus       171 ~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~  250 (267)
T cd08224         171 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPE  250 (267)
T ss_pred             cccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcc
Confidence            5899999988889999999999999999999999986543  22233333333222222223466888999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.++++
T Consensus       251 ~Rp~~~~il~  260 (267)
T cd08224         251 KRPDISYVLQ  260 (267)
T ss_pred             cCCCHHHHHH
Confidence            9999998873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG4645|consensus

Probab=99.70  E-value=4.4e-18  Score=114.74  Aligned_cols=97  Identities=28%  Similarity=0.429  Sum_probs=81.3

Q ss_pred             CccccccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDM---SYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~---~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      |-|||||++.+.   +...+.||||+||++.+|.||+.||...+ .-.+..++..+-.++.+.. .+.+-++|+..||..
T Consensus      1402 ~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~-ls~~g~dFle~Cl~~ 1480 (1509)
T KOG4645|consen 1402 PMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER-LSSEGRDFLEHCLEQ 1480 (1509)
T ss_pred             chhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh-hhHhHHHHHHHHHhc
Confidence            469999999763   45668999999999999999999998754 4567777777776666653 678888999999999


Q ss_pred             CCCCCCCHHHHhcCcccccccc
Q psy2811          77 DLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      ||+.|.++.|++.|.|-+....
T Consensus      1481 dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1481 DPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred             CchhhhHHHHHHHhhccccccc
Confidence            9999999999999999876644

>KOG1006|consensus

Probab=99.69  E-value=1.2e-17  Score=97.43  Aligned_cols=96  Identities=33%  Similarity=0.506  Sum_probs=78.1

Q ss_pred             cccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcC----CcHHHHHHHHHHh
Q psy2811           2 SVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRF----DCVLLCDFVNECL   74 (108)
Q Consensus         2 ~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~l   74 (108)
                      -|||||.+..  .+|+.++|+||+|+.++++.+|..|+.+.+ ..+++..+..+-++.+....    .+..+..++..|+
T Consensus       232 pYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl  311 (361)
T KOG1006|consen  232 PYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCL  311 (361)
T ss_pred             cccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHh
Confidence            4999999864  458889999999999999999999998864 45666666666555443221    3678889999999


Q ss_pred             hcCCCCCCCHHHHhcCccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+|.+.||...+++.++|++.-.
T Consensus       312 ~Kd~~~Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  312 IKDRSDRPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             hcccccCcchhhhhcCchhhhhh
Confidence            99999999999999999997543

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.69  E-value=1.3e-16  Score=95.31  Aligned_cols=94  Identities=28%  Similarity=0.341  Sum_probs=68.9

Q ss_pred             ccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLDMS--YDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~~~--~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+.+..  .+.++|+|++|++++++++|..||.....    ......+.....+.  +...+..+.+++.+||+
T Consensus       171 ~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~  248 (288)
T cd05583         171 EYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPF--PKTMSAEARDFIQKLLE  248 (288)
T ss_pred             cccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCC--CcccCHHHHHHHHHHhc
Confidence            589999987654  67789999999999999999999864321    22222222222221  12346788999999999


Q ss_pred             cCCCCCCC---HHHHhcCccccccc
Q psy2811          76 KDLEERPF---AKELLRHPLLKKGA   97 (108)
Q Consensus        76 ~~p~~R~~---~~~~l~~~~~~~~~   97 (108)
                      .+|++||+   +.++++|+||+...
T Consensus       249 ~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         249 KDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             CCHhhccCcchHHHHhcCcccccCC
Confidence            99999998   46679999998753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.69  E-value=9.5e-17  Score=100.01  Aligned_cols=88  Identities=20%  Similarity=0.304  Sum_probs=65.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.........................+..+.+++..||..+|++
T Consensus       304 ~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  383 (400)
T cd05105         304 KWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEK  383 (400)
T ss_pred             ceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhH
Confidence            5999999988889999999999999999986 888887653322222222222122222245678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++.+
T Consensus       384 RPt~~~l~~  392 (400)
T cd05105         384 RPSFLHLSD  392 (400)
T ss_pred             CcCHHHHHH
Confidence            999988864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0595|consensus

Probab=99.69  E-value=6.5e-17  Score=98.36  Aligned_cols=97  Identities=22%  Similarity=0.364  Sum_probs=79.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |-|||||++....|+.|+|+||+|+++|++++|..||......+.+..+..+.... ..+...+....+++...+..++.
T Consensus       178 plYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~  257 (429)
T KOG0595|consen  178 PLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPK  257 (429)
T ss_pred             ccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCcc
Confidence            45999999999999999999999999999999999999988888777665554322 22223455566899999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +|.++.+...|+++....
T Consensus       258 ~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  258 DRISFEDFFDHPFLAANP  275 (429)
T ss_pred             ccCchHHhhhhhhcccCc
Confidence            999999999999887654

>KOG0193|consensus

Probab=99.69  E-value=3.8e-17  Score=103.48  Aligned_cols=89  Identities=22%  Similarity=0.301  Sum_probs=71.2

Q ss_pred             Ccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC---CCCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLD---MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP---PPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~---~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|||||++..   ..|+..+|||+||++.|||++|..||...+...++..+.++.   .........++++++|+..||
T Consensus       554 ilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~  633 (678)
T KOG0193|consen  554 LLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCW  633 (678)
T ss_pred             hhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHH
Confidence            36999999974   447889999999999999999999999555555666766662   222223334668999999999


Q ss_pred             hcCCCCCCCHHHHhc
Q psy2811          75 RKDLEERPFAKELLR   89 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~   89 (108)
                      ..+++.||.+.+|+.
T Consensus       634 ~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  634 KFDREERPLFPQLLS  648 (678)
T ss_pred             hcCcccCccHHHHHH
Confidence            999999999999885

>KOG1989|consensus

Probab=99.69  E-value=4.9e-17  Score=105.69  Aligned_cols=89  Identities=18%  Similarity=0.175  Sum_probs=73.0

Q ss_pred             Ccccccccc---ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQ---LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~---~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      |.|.+||.+   .+...+.|+|||++||+||.++....||.....    ..|..+.+..+.....+..+++||+.||+.+
T Consensus       219 p~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~n  294 (738)
T KOG1989|consen  219 PQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPN  294 (738)
T ss_pred             ccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccC
Confidence            469999987   456678999999999999999999999987643    3456666665554466889999999999999


Q ss_pred             CCCCCCHHHHhcCccc
Q psy2811          78 LEERPFAKELLRHPLL   93 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~   93 (108)
                      |.+||++.+++.+-+.
T Consensus       295 P~~RPnI~Qv~~~~~~  310 (738)
T KOG1989|consen  295 PDERPNIYQVLEEIFE  310 (738)
T ss_pred             cccCCCHHHHHHHHHH
Confidence            9999999999865443

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.69  E-value=1.5e-16  Score=95.21  Aligned_cols=88  Identities=20%  Similarity=0.296  Sum_probs=65.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCHHHHHhhccCC------CCCCCCCcCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE--GDPPLSDLHPMRALFQIPRN------PPPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~--g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~   73 (108)
                      .|++||.+.+..++.++|+||+|+++|++++  +..|+........+..+...      ..........+.++.+++.+|
T Consensus       197 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c  276 (296)
T cd05051         197 RWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLEC  276 (296)
T ss_pred             eecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHH
Confidence            5999999988888999999999999999987  66788766554443333211      111111123357899999999


Q ss_pred             hhcCCCCCCCHHHHhc
Q psy2811          74 LRKDLEERPFAKELLR   89 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~   89 (108)
                      |..+|++||++.++++
T Consensus       277 l~~~p~~Rpt~~el~~  292 (296)
T cd05051         277 WRRDEEDRPTFREIHL  292 (296)
T ss_pred             hccChhcCCCHHHHHH
Confidence            9999999999999963

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.69  E-value=1.3e-16  Score=99.47  Aligned_cols=89  Identities=19%  Similarity=0.337  Sum_probs=67.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||......+..............+...+.++.+++.+||..+|.+
T Consensus       306 ~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~  385 (401)
T cd05107         306 KWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEI  385 (401)
T ss_pred             ceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhH
Confidence            5999999988888999999999999999998 888987655444332322222111122245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.++++.
T Consensus       386 RPs~~ell~~  395 (401)
T cd05107         386 RPDFSQLVHL  395 (401)
T ss_pred             CcCHHHHHHH
Confidence            9999999853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.69  E-value=3e-16  Score=92.25  Aligned_cols=87  Identities=18%  Similarity=0.278  Sum_probs=68.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+....++.++|+||+|++++++++ |..||......+....+....... .+...+..+.+++.+||..+|++
T Consensus       164 ~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  242 (256)
T cd05039         164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRME-APEGCPPEVYKVMKDCWELDPAK  242 (256)
T ss_pred             cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCC-CccCCCHHHHHHHHHHhccChhh
Confidence            5899999988888889999999999999997 999998776655444443332221 12244678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       243 Rp~~~~l~~  251 (256)
T cd05039         243 RPTFKQLRE  251 (256)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.69  E-value=2.1e-16  Score=93.81  Aligned_cols=89  Identities=19%  Similarity=0.299  Sum_probs=69.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...........+.............+..+.+++.+||..+|++
T Consensus       183 ~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~  262 (275)
T cd05046         183 RWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKD  262 (275)
T ss_pred             eecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCccc
Confidence            4899999888888889999999999999998 788887665555444444333322222345678999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++..
T Consensus       263 Rp~~~~~l~~  272 (275)
T cd05046         263 RPSFSELVSA  272 (275)
T ss_pred             CCCHHHHHHH
Confidence            9999998853

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.69  E-value=2.1e-16  Score=92.89  Aligned_cols=87  Identities=15%  Similarity=0.220  Sum_probs=68.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||......+....+....... .....+..+.+++.+||+.+|.+
T Consensus       162 ~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  240 (254)
T cd05083         162 KWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRME-PPEGCPADVYVLMTSCWETEPKK  240 (254)
T ss_pred             eecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCC-CCCcCCHHHHHHHHHHcCCChhh
Confidence            5899999988888999999999999999997 999998776655444443332221 22244678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       241 Rp~~~~l~~  249 (254)
T cd05083         241 RPSFHKLRE  249 (254)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.69  E-value=2.7e-16  Score=92.24  Aligned_cols=87  Identities=21%  Similarity=0.337  Sum_probs=69.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+|++|++++++++ |..||...+.......+......... ...+..+.+++.+|+..+|++
T Consensus       169 ~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~  247 (258)
T smart00219      169 RWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKP-ENCPPEIYKLMLQCWAEDPED  247 (258)
T ss_pred             cccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC-CcCCHHHHHHHHHHCcCChhh
Confidence            5899999988888999999999999999998 78888876665555454444332222 245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       248 Rpt~~~ll~  256 (258)
T smart00219      248 RPTFSELVE  256 (258)
T ss_pred             CcCHHHHHh
Confidence            999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.68  E-value=1.4e-16  Score=97.39  Aligned_cols=88  Identities=19%  Similarity=0.371  Sum_probs=65.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-hhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRAL-FQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||......... ..+..+... ..+...+..+.+++..||+.+|+
T Consensus       246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~cl~~~p~  324 (343)
T cd05103         246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-RAPDYTTPEMYQTMLDCWHGEPS  324 (343)
T ss_pred             ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC-CCCCCCCHHHHHHHHHHccCChh
Confidence            4999999988889999999999999999986 88898765432222 222222111 11223456788999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.++++|
T Consensus       325 ~Rps~~eil~~  335 (343)
T cd05103         325 QRPTFSELVEH  335 (343)
T ss_pred             hCcCHHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.68  E-value=2.2e-16  Score=93.04  Aligned_cols=86  Identities=23%  Similarity=0.371  Sum_probs=62.8

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|++||.+.+ ..++.++|+||+|+++|++++| ..|+............ ...... + .....++.+++.+||+.+|+
T Consensus       169 ~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~li~~~l~~~p~  245 (258)
T cd05078         169 PWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-EDRHQL-P-APKWTELANLINQCMDYEPD  245 (258)
T ss_pred             CccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-HccccC-C-CCCcHHHHHHHHHHhccChh
Confidence            5999999876 4578899999999999999998 4666655443322211 111111 1 13346788999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||+++++++.
T Consensus       246 ~Rps~~~il~~  256 (258)
T cd05078         246 FRPSFRAIIRD  256 (258)
T ss_pred             hCCCHHHHHHh
Confidence            99999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.67  E-value=2.9e-16  Score=94.50  Aligned_cols=87  Identities=20%  Similarity=0.297  Sum_probs=63.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCHHHHHhhcc---CC---CCCCCCCcCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE--GDPPLSDLHPMRALFQIP---RN---PPPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~--g~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~l~~~~   73 (108)
                      .|+|||.+.+..++.++|+||+|++++++++  +..||......+....+.   ..   ......+...+..+.+++.+|
T Consensus       205 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  284 (304)
T cd05096         205 RWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQC  284 (304)
T ss_pred             cccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHH
Confidence            5999999988889999999999999999986  557777655443322211   11   111111123467889999999


Q ss_pred             hhcCCCCCCCHHHHh
Q psy2811          74 LRKDLEERPFAKELL   88 (108)
Q Consensus        74 l~~~p~~R~~~~~~l   88 (108)
                      |..+|++||++.++.
T Consensus       285 l~~~p~~RPs~~~i~  299 (304)
T cd05096         285 WSRDCRERPSFSDIH  299 (304)
T ss_pred             ccCCchhCcCHHHHH
Confidence            999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.67  E-value=4.7e-16  Score=92.53  Aligned_cols=86  Identities=24%  Similarity=0.365  Sum_probs=69.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+....+....+........+ ...+..+.+++..||..+|..
T Consensus       176 ~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~p~~  254 (279)
T cd05057         176 KWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQP-PICTIDVYMVLVKCWMIDAES  254 (279)
T ss_pred             cccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCC-CCCCHHHHHHHHHHcCCChhh
Confidence            5899999988888899999999999999998 99999887766555444443322222 245677889999999999999


Q ss_pred             CCCHHHHh
Q psy2811          81 RPFAKELL   88 (108)
Q Consensus        81 R~~~~~~l   88 (108)
                      ||++.+++
T Consensus       255 Rp~~~~l~  262 (279)
T cd05057         255 RPTFKELI  262 (279)
T ss_pred             CCCHHHHH
Confidence            99999886

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.67  E-value=3.2e-16  Score=92.76  Aligned_cols=87  Identities=21%  Similarity=0.293  Sum_probs=68.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||...+..+....+....... .....+..+.+++..||..+|.+
T Consensus       176 ~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  254 (269)
T cd05065         176 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLP-PPMDCPTALHQLMLDCWQKDRNA  254 (269)
T ss_pred             eecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCC-CcccCCHHHHHHHHHHcCCChhh
Confidence            4899999988889999999999999999875 999998776655544443322211 12234677889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       255 Rp~~~~i~~  263 (269)
T cd05065         255 RPKFGQIVS  263 (269)
T ss_pred             CcCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.67  E-value=4.4e-16  Score=92.15  Aligned_cols=87  Identities=21%  Similarity=0.290  Sum_probs=68.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+|++|++++++++ |..||......+....+...... ......+..+.+++.+|++.+|.+
T Consensus       174 ~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~  252 (267)
T cd05066         174 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRL-PAPMDCPAALHQLMLDCWQKDRNE  252 (267)
T ss_pred             eecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcC-CCCCCCCHHHHHHHHHHcccCchh
Confidence            4899999988889999999999999999876 99999877655554444433221 122234678889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       253 Rp~~~~i~~  261 (267)
T cd05066         253 RPKFEQIVS  261 (267)
T ss_pred             CCCHHHHHH
Confidence            999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0670|consensus

Probab=99.67  E-value=1.2e-17  Score=104.85  Aligned_cols=93  Identities=26%  Similarity=0.309  Sum_probs=70.2

Q ss_pred             cccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc--cCCCCC-------------------------
Q psy2811           3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI--PRNPPP-------------------------   55 (108)
Q Consensus         3 y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~--~~~~~~-------------------------   55 (108)
                      |.|||++.|-.|+...|+||+||.+|++.+|.+.|.+....+++...  ..+..+                         
T Consensus       601 YRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~  680 (752)
T KOG0670|consen  601 YRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEV  680 (752)
T ss_pred             ccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEec
Confidence            88999999999999999999999999999999999876543322111  000000                         


Q ss_pred             -------------CCCC-------------c-----CCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          56 -------------QLTK-------------R-----FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        56 -------------~~~~-------------~-----~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                                   ...+             .     ..-..+++|+.+||..||++|.+..++|+||||..
T Consensus       681 D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  681 DKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             cccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence                         0000             0     01346889999999999999999999999999975

>KOG0607|consensus

Probab=99.67  E-value=1.2e-16  Score=95.43  Aligned_cols=97  Identities=27%  Similarity=0.385  Sum_probs=76.1

Q ss_pred             ccccccccc---c--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---------------HHHHhhccCCCCCCCCC--
Q psy2811           2 SVIACEQQL---D--MSYDARCDIWSLGITAIELAEGDPPLSDLHP---------------MRALFQIPRNPPPQLTK--   59 (108)
Q Consensus         2 ~y~ape~~~---~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---------------~~~~~~~~~~~~~~~~~--   59 (108)
                      +|||||++.   +  .-|+.++|.||+|+++|.|++|-+||.+.-.               ...+..|..+...++..  
T Consensus       251 EfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdW  330 (463)
T KOG0607|consen  251 EFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDW  330 (463)
T ss_pred             hhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhh
Confidence            599999863   2  4478899999999999999999999975321               22355566666555432  


Q ss_pred             cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          60 RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        60 ~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      ...+.+.++++..++..|+.+|.++.++++|||++....
T Consensus       331 ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~  369 (463)
T KOG0607|consen  331 AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAP  369 (463)
T ss_pred             HHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccch
Confidence            134788999999999999999999999999999986644

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.67  E-value=5.2e-16  Score=93.43  Aligned_cols=87  Identities=21%  Similarity=0.264  Sum_probs=66.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.........+...... ......+..+.+++..||..+|.+
T Consensus       176 ~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~c~~~~p~~  254 (303)
T cd05110         176 KWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL-PQPPICTIDVYMVMVKCWMIDADS  254 (303)
T ss_pred             ccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHcCCChhh
Confidence            5999999988888999999999999999987 88898776544332222222211 112234677889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       255 Rp~~~~l~~  263 (303)
T cd05110         255 RPKFKELAA  263 (303)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.67  E-value=3.9e-16  Score=92.28  Aligned_cols=86  Identities=26%  Similarity=0.414  Sum_probs=63.0

Q ss_pred             ccccccccc-cCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQL-DMSYDARCDIWSLGITAIELA-EGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~-~~~~~~~~dv~s~g~~l~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||.+. +..++.++|+||+|+++|+++ .|..|+......+.. ..........  .....++.+++.+||+.||.
T Consensus       173 ~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~li~~cl~~dp~  249 (262)
T cd05077         173 PWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCMLV--TPSCKELADLMTHCMNYDPN  249 (262)
T ss_pred             cccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccCC--CCChHHHHHHHHHHcCCChh
Confidence            599999886 466788999999999999997 588888765443322 1111111111  12346788999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.+|+++
T Consensus       250 ~Rp~~~~il~~  260 (262)
T cd05077         250 QRPFFRAIMRD  260 (262)
T ss_pred             hCcCHHHHHHh
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.66  E-value=4.3e-16  Score=92.30  Aligned_cols=87  Identities=17%  Similarity=0.286  Sum_probs=68.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+.+..++.++|+||+|++++++++ |..||.+.+..+....+......... ...+..+.+++..||..+|++
T Consensus       180 ~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~p~~  258 (273)
T cd05074         180 KWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP-PDCLEDVYELMCQCWSPEPKC  258 (273)
T ss_pred             hhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCC-CCCCHHHHHHHHHHcCCChhh
Confidence            4789999888888889999999999999998 88999877665544444333222211 234678899999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       259 Rps~~~~~~  267 (273)
T cd05074         259 RPSFQHLRD  267 (273)
T ss_pred             CcCHHHHHH
Confidence            999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.66  E-value=5.1e-16  Score=93.20  Aligned_cols=86  Identities=15%  Similarity=0.173  Sum_probs=66.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HH--------HHhhccCCCCCCCCCcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-MR--------ALFQIPRNPPPQLTKRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+... ..        ...++......   ....+..+.+++.
T Consensus       197 ~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  273 (294)
T PHA02882        197 LYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIK---IKNANKFIYDFIE  273 (294)
T ss_pred             ccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhc---cCCCCHHHHHHHH
Confidence            358999999999999999999999999999999999987632 11        11222222111   1134678999999


Q ss_pred             HHhhcCCCCCCCHHHHhc
Q psy2811          72 ECLRKDLEERPFAKELLR   89 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~   89 (108)
                      .|+..+|++||++.++.+
T Consensus       274 ~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        274 CVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHhCCCCCCCCHHHHHH
Confidence            999999999999999874

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.66  E-value=5.4e-16  Score=93.01  Aligned_cols=88  Identities=17%  Similarity=0.276  Sum_probs=64.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCHHHHHhhccC------CCCCCCCCcCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE--GDPPLSDLHPMRALFQIPR------NPPPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~--g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~   73 (108)
                      .|+|||.+.+..++.++|+||+|++++++++  +..||...........+..      ...........+..+.+++.+|
T Consensus       196 ~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  275 (295)
T cd05097         196 RWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRC  275 (295)
T ss_pred             eecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHH
Confidence            5999999988888999999999999999987  5678876554433222111      0001111123467899999999


Q ss_pred             hhcCCCCCCCHHHHhc
Q psy2811          74 LRKDLEERPFAKELLR   89 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~   89 (108)
                      |..+|.+||++.++++
T Consensus       276 l~~~p~~RPs~~~i~~  291 (295)
T cd05097         276 WSRDIKDRPTFNKIHH  291 (295)
T ss_pred             cCCCchhCcCHHHHHH
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.66  E-value=6e-16  Score=92.52  Aligned_cols=94  Identities=26%  Similarity=0.329  Sum_probs=69.9

Q ss_pred             ccccccccccC--CCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQLDM--SYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~~~--~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   75 (108)
                      .|++||.+.+.  .++.++|+|++|++++++++|..||.....    ......+.....+.  +...+..+.+++.+||.
T Consensus       171 ~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~l~  248 (290)
T cd05613         171 EYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY--PQEMSALAKDIIQRLLM  248 (290)
T ss_pred             ccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC--CccCCHHHHHHHHHHhc
Confidence            58999998653  456789999999999999999999864321    22222222222222  12356778899999999


Q ss_pred             cCCCCCC-----CHHHHhcCccccccc
Q psy2811          76 KDLEERP-----FAKELLRHPLLKKGA   97 (108)
Q Consensus        76 ~~p~~R~-----~~~~~l~~~~~~~~~   97 (108)
                      .+|.+|+     ++++++.|+||....
T Consensus       249 ~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         249 KDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             CCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            9999997     899999999998765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1290|consensus

Probab=99.66  E-value=1.2e-16  Score=99.40  Aligned_cols=97  Identities=31%  Similarity=0.359  Sum_probs=69.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC------HHHHHhhc---c--------------------CC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH------PMRALFQI---P--------------------RN   52 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~------~~~~~~~~---~--------------------~~   52 (108)
                      .|.+||++.+.+|++.+||||++|++++++||-..|....      ..+.+..|   .                    ++
T Consensus       416 QYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G  495 (590)
T KOG1290|consen  416 QYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRG  495 (590)
T ss_pred             hccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhcccc
Confidence            4899999999999999999999999999999987774211      11111111   0                    00


Q ss_pred             CC------CCCC-----------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          53 PP------PQLT-----------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        53 ~~------~~~~-----------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      ..      .+++           +.....++.+|+.-||+.+|.+|+++.++++|||+.....
T Consensus       496 ~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~~~  558 (590)
T KOG1290|consen  496 ELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPVAG  558 (590)
T ss_pred             ceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccCCCC
Confidence            00      0000           0012567889999999999999999999999999985543

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.65  E-value=7e-16  Score=91.94  Aligned_cols=88  Identities=15%  Similarity=0.166  Sum_probs=62.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHH------------hhccCCCCCCCCCcCCcHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM--RAL------------FQIPRNPPPQLTKRFDCVLLC   67 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~--~~~------------~~~~~~~~~~~~~~~~~~~~~   67 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..|+......  +..            ............+...+..+.
T Consensus       175 ~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (283)
T cd05080         175 FWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVY  254 (283)
T ss_pred             eeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHH
Confidence            389999998888899999999999999999999887543210  000            000000011111223467899


Q ss_pred             HHHHHHhhcCCCCCCCHHHHhc
Q psy2811          68 DFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +++..||..+|++||++.+++.
T Consensus       255 ~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         255 ILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0594|consensus

Probab=99.65  E-value=7.3e-16  Score=92.15  Aligned_cols=98  Identities=28%  Similarity=0.273  Sum_probs=75.4

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCC---------------CCCCCc--
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPP---------------PQLTKR--   60 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~---------------~~~~~~--   60 (108)
                      .|.|||++.+. .|++..|+||+||++.+|+++++.|.+....+++.+|..   .+.               ......  
T Consensus       185 WYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~  264 (323)
T KOG0594|consen  185 WYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGP  264 (323)
T ss_pred             eccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCc
Confidence            58999999886 789999999999999999999999999877666555411   110               000000  


Q ss_pred             --------CCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          61 --------FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        61 --------~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                              .......+++..||+.+|.+|.++..++.|+||......
T Consensus       265 ~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~  311 (323)
T KOG0594|consen  265 KDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEK  311 (323)
T ss_pred             cchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccc
Confidence                    012467799999999999999999999999999877443

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.65  E-value=8.6e-16  Score=92.17  Aligned_cols=88  Identities=19%  Similarity=0.291  Sum_probs=64.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCHHHHHhhcc------CCCCCCCCCcCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE--GDPPLSDLHPMRALFQIP------RNPPPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~--g~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~   73 (108)
                      .|++||...+..++.++|+||+|+++|++++  |..||......+......      ............+..+.+++..|
T Consensus       197 ~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  276 (296)
T cd05095         197 RWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSC  276 (296)
T ss_pred             ccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHH
Confidence            5899998888888999999999999999998  678887655433222110      01111111223457888999999


Q ss_pred             hhcCCCCCCCHHHHhc
Q psy2811          74 LRKDLEERPFAKELLR   89 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~   89 (108)
                      |+.+|.+||++.++.+
T Consensus       277 l~~~p~~Rp~~~~i~~  292 (296)
T cd05095         277 WRRNAKERPSFQEIHA  292 (296)
T ss_pred             cCCCcccCCCHHHHHH
Confidence            9999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0665|consensus

Probab=99.64  E-value=4.9e-16  Score=92.37  Aligned_cols=92  Identities=33%  Similarity=0.472  Sum_probs=71.1

Q ss_pred             cccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC----------------------CCC------
Q psy2811           3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR----------------------NPP------   54 (108)
Q Consensus         3 y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~----------------------~~~------   54 (108)
                      |.|||++.+..|...+||||+||++.+|+.|...|.+.+..++..++..                      ..+      
T Consensus       183 yrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~  262 (369)
T KOG0665|consen  183 YRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAIS  262 (369)
T ss_pred             ccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccc
Confidence            7899999998899999999999999999999998887665544333311                      000      


Q ss_pred             -----CC-------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccc
Q psy2811          55 -----PQ-------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLK   94 (108)
Q Consensus        55 -----~~-------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   94 (108)
                           +.       .........+++++.+||..+|++|.+++++|+|||++
T Consensus       263 f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  263 FSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                 00       00012356688999999999999999999999999997

>KOG0695|consensus

Probab=99.64  E-value=4.1e-16  Score=94.10  Aligned_cols=95  Identities=22%  Similarity=0.295  Sum_probs=74.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-------CHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL-------HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   73 (108)
                      |+|+|||++.+..|+.++|+|++|+++++|..|+.||.-.       +..+-+.++........++ ..+.....++++.
T Consensus       415 pnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr-slsvkas~vlkgf  493 (593)
T KOG0695|consen  415 PNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR-SLSVKASHVLKGF  493 (593)
T ss_pred             CcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc-eeehhhHHHHHHh
Confidence            6899999999999999999999999999999999999522       2233344443333333333 4566777899999


Q ss_pred             hhcCCCCCC------CHHHHhcCcccccc
Q psy2811          74 LRKDLEERP------FAKELLRHPLLKKG   96 (108)
Q Consensus        74 l~~~p~~R~------~~~~~l~~~~~~~~   96 (108)
                      |++||+.|.      .++++..|+||+..
T Consensus       494 lnkdp~erlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  494 LNKDPKERLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             hcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence            999999997      47899999999843

>KOG0600|consensus

Probab=99.64  E-value=4.6e-16  Score=96.94  Aligned_cols=94  Identities=23%  Similarity=0.274  Sum_probs=73.5

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc---cCCCCCCC------C------C------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNPPPQL------T------K------   59 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~------~------~------   59 (108)
                      .|.+||.+.| ..|+..+|+||.||++.+|+.|++.|.+....+++..|   +..+....      +      +      
T Consensus       284 WYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r  363 (560)
T KOG0600|consen  284 WYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKR  363 (560)
T ss_pred             eccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccc
Confidence            5999999988 66999999999999999999999999998877665554   22211100      0      0      


Q ss_pred             ------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          60 ------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        60 ------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                            ...+....+|+..+|..||.+|.|+.++|+++||..
T Consensus       364 ~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  364 RLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             hHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence                  012456668999999999999999999999999943

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.63  E-value=1.3e-15  Score=98.43  Aligned_cols=97  Identities=21%  Similarity=0.227  Sum_probs=61.2

Q ss_pred             CccccccccccCC----------------------CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC-CC----
Q psy2811           1 MSVIACEQQLDMS----------------------YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR-NP----   53 (108)
Q Consensus         1 ~~y~ape~~~~~~----------------------~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~-~~----   53 (108)
                      +.|+|||.+....                      ++.++||||+|+++++|+++..+...  ....+.+... ..    
T Consensus       321 ~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~  398 (566)
T PLN03225        321 PRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLV  398 (566)
T ss_pred             CCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHH
Confidence            4699999764322                      33456999999999999986554332  1111111100 00    


Q ss_pred             ------CCCCCC---------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          54 ------PPQLTK---------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        54 ------~~~~~~---------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                            ......         ........+|+.+||+.||++||++.++++||||++....
T Consensus       399 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~  459 (566)
T PLN03225        399 AWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL  459 (566)
T ss_pred             HHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence                  000000         0112334589999999999999999999999999876554

>KOG0587|consensus

Probab=99.63  E-value=4.3e-16  Score=102.04  Aligned_cols=97  Identities=53%  Similarity=0.891  Sum_probs=82.6

Q ss_pred             Ccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLD-----MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~-----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l   74 (108)
                      |.|||||++--     ..|+..+|+||+|++..+|..|.+|+-...++..+..|...+++.+. +..-+.++.+||..||
T Consensus       187 P~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL  266 (953)
T KOG0587|consen  187 PYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCL  266 (953)
T ss_pred             cccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHH
Confidence            56999999842     34667899999999999999999999888888888888887776655 3334888999999999


Q ss_pred             hcCCCCCCCHHHHhcCccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+|..+||+..++++|||++...
T Consensus       267 ~Kd~e~RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  267 VKDYEQRPSTEELLKHPFITEQP  289 (953)
T ss_pred             hhccccCcchhhhccCCcccccc
Confidence            99999999999999999999443

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.63  E-value=1.9e-15  Score=89.95  Aligned_cols=86  Identities=26%  Similarity=0.401  Sum_probs=62.7

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHH-hCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELA-EGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|++||.+.+ ..++.++|+||+|+++++++ +|..||......+...... .......  .....+.+++.+||..+|+
T Consensus       185 ~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~li~~cl~~~p~  261 (274)
T cd05076         185 PWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYE-KKHRLPE--PSCKELATLISQCLTYEPT  261 (274)
T ss_pred             cccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHH-hccCCCC--CCChHHHHHHHHHcccChh
Confidence            5899998865 55788999999999999984 6888887664433221111 1111111  2345788999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.+++++
T Consensus       262 ~Rps~~~il~~  272 (274)
T cd05076         262 QRPSFRTILRD  272 (274)
T ss_pred             hCcCHHHHHHh
Confidence            99999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG0611|consensus

Probab=99.62  E-value=1.9e-15  Score=93.02  Aligned_cols=93  Identities=20%  Similarity=0.209  Sum_probs=79.5

Q ss_pred             CccccccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDA-RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~-~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |-|.+||++.|..|.. .+|.||+|+++|.+..|..||.+.+......+|..+.+..+.   .+.....+|+.||..+|.
T Consensus       216 PLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~---~PSdA~gLIRwmLmVNP~  292 (668)
T KOG0611|consen  216 PLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE---TPSDASGLIRWMLMVNPE  292 (668)
T ss_pred             cccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC---CCchHHHHHHHHHhcCcc
Confidence            4599999999999965 699999999999999999999999988888888887765443   233455799999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      .|.|+++|..|=|++-.
T Consensus       293 RRATieDiAsHWWvNwg  309 (668)
T KOG0611|consen  293 RRATIEDIASHWWVNWG  309 (668)
T ss_pred             cchhHHHHhhhheeecc
Confidence            99999999999888643

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.62  E-value=3.2e-15  Score=88.58  Aligned_cols=87  Identities=26%  Similarity=0.277  Sum_probs=61.1

Q ss_pred             ccccccccccC-------CCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCC-CCCCC---CCcCCcHHHHHH
Q psy2811           2 SVIACEQQLDM-------SYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRN-PPPQL---TKRFDCVLLCDF   69 (108)
Q Consensus         2 ~y~ape~~~~~-------~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~l   69 (108)
                      .|+|||++.+.       .++.++|+||+|++++++++ |..||......+........ .....   .....+..+.++
T Consensus       167 ~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (269)
T cd05087         167 RWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEV  246 (269)
T ss_pred             cccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHH
Confidence            49999988542       34678999999999999986 99999776554433222111 11111   111345678899


Q ss_pred             HHHHhhcCCCCCCCHHHHhc
Q psy2811          70 VNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        70 ~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +..|+ .+|.+||++.+|++
T Consensus       247 ~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         247 MQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHh-cCcccCCCHHHHHH
Confidence            99998 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0612|consensus

Probab=99.62  E-value=1e-15  Score=102.59  Aligned_cols=95  Identities=21%  Similarity=0.229  Sum_probs=76.8

Q ss_pred             Cccccccccc----c-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCCCcCCcHHHHHHHHHH
Q psy2811           1 MSVIACEQQL----D-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         1 ~~y~ape~~~----~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~   73 (108)
                      |.|++||++.    + +.|+.-+|+||+|+.+|+|+.|..||......+++.+|..-.  ..++.....+.+.++||++.
T Consensus       240 PDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~l  319 (1317)
T KOG0612|consen  240 PDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEAL  319 (1317)
T ss_pred             CCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHH
Confidence            6899999986    2 457889999999999999999999999988888877775542  22222234588999999987


Q ss_pred             hhcCCCCCCC---HHHHhcCcccccc
Q psy2811          74 LRKDLEERPF---AKELLRHPLLKKG   96 (108)
Q Consensus        74 l~~~p~~R~~---~~~~l~~~~~~~~   96 (108)
                      + .+|..|..   ++++..||||.+.
T Consensus       320 l-~~~e~RLgrngiedik~HpFF~g~  344 (1317)
T KOG0612|consen  320 L-CDREVRLGRNGIEDIKNHPFFEGI  344 (1317)
T ss_pred             h-cChhhhcccccHHHHHhCccccCC
Confidence            6 56788887   9999999999865

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.60  E-value=5.4e-15  Score=86.93  Aligned_cols=85  Identities=29%  Similarity=0.419  Sum_probs=61.9

Q ss_pred             ccccccccccC--CCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQLDM--SYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~~~--~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|++||.+.+.  .++.++|+||+|++++++++ |..|+................ ....  .....+.+++.+||..+|
T Consensus       169 ~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~li~~~l~~~p  245 (259)
T cd05037         169 PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH-RLPM--PDCAELANLINQCWTYDP  245 (259)
T ss_pred             CccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC-CCCC--CCchHHHHHHHHHhccCh
Confidence            58999998876  67889999999999999998 577776654322222211111 1111  223678899999999999


Q ss_pred             CCCCCHHHHhc
Q psy2811          79 EERPFAKELLR   89 (108)
Q Consensus        79 ~~R~~~~~~l~   89 (108)
                      .+||++.++++
T Consensus       246 ~~Rpt~~~il~  256 (259)
T cd05037         246 TKRPSFRAILR  256 (259)
T ss_pred             hhCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG4278|consensus

Probab=99.60  E-value=5.9e-15  Score=95.02  Aligned_cols=88  Identities=15%  Similarity=0.216  Sum_probs=72.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|.|||.+-...++.++|||+||+++|++.+ |-.|+.+.+.......+.. ..+...+..+++...+||+.||+..|+
T Consensus       430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk-gyRM~~PeGCPpkVYeLMraCW~WsPs  508 (1157)
T KOG4278|consen  430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK-GYRMDGPEGCPPKVYELMRACWNWSPS  508 (1157)
T ss_pred             ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc-cccccCCCCCCHHHHHHHHHHhcCCcc
Confidence            46999999999999999999999999999987 7889999877655444433 334444446788899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.++.+
T Consensus       509 DRPsFaeiHq  518 (1157)
T KOG4278|consen  509 DRPSFAEIHQ  518 (1157)
T ss_pred             cCccHHHHHH
Confidence            9999998864

>KOG1027|consensus

Probab=99.60  E-value=1.8e-16  Score=103.27  Aligned_cols=91  Identities=24%  Similarity=0.243  Sum_probs=69.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCc-CCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKR-FDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~p~   79 (108)
                      +|+|||++....-..++|++|+||++|..++| ..||...-  +...+|..+......-. ....+..+||.+|++.+|.
T Consensus       679 GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~  756 (903)
T KOG1027|consen  679 GWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQ  756 (903)
T ss_pred             cccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcc
Confidence            69999999988888899999999999988774 89996543  23334444443322110 1112788999999999999


Q ss_pred             CCCCHHHHhcCcccc
Q psy2811          80 ERPFAKELLRHPLLK   94 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~   94 (108)
                      .||++.+|+.||+|=
T Consensus       757 ~RPsa~~VL~HPlFW  771 (903)
T KOG1027|consen  757 LRPSATDVLNHPLFW  771 (903)
T ss_pred             cCCCHHHHhCCCccC
Confidence            999999999999883

>KOG0194|consensus

Probab=99.60  E-value=5.7e-16  Score=97.18  Aligned_cols=89  Identities=21%  Similarity=0.335  Sum_probs=77.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+....|+.++|||++|+++|++.+ |..||.+....+...++.....+...+...+..+..++..||..+|+
T Consensus       326 irWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~  405 (474)
T KOG0194|consen  326 IRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPE  405 (474)
T ss_pred             ceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChh
Confidence            36999999999999999999999999999987 78899999988888888565555555556788888999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +|+++.++.+
T Consensus       406 ~R~tm~~i~~  415 (474)
T KOG0194|consen  406 DRPTMSTIKK  415 (474)
T ss_pred             hccCHHHHHH
Confidence            9999988763

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.60  E-value=9e-15  Score=86.61  Aligned_cols=87  Identities=28%  Similarity=0.307  Sum_probs=61.9

Q ss_pred             cccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCC----CCCcCCcHHHHHH
Q psy2811           2 SVIACEQQLD-------MSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQ----LTKRFDCVLLCDF   69 (108)
Q Consensus         2 ~y~ape~~~~-------~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l   69 (108)
                      .|+|||++..       ..++.++|+||+|++++++++ |..||......+............    ......+....++
T Consensus       167 ~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (269)
T cd05042         167 RWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEV  246 (269)
T ss_pred             cccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHH
Confidence            4899998743       345678999999999999998 788887766555444332222111    1111346677789


Q ss_pred             HHHHhhcCCCCCCCHHHHhc
Q psy2811          70 VNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        70 ~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +..|+ .||++||++.+|++
T Consensus       247 ~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         247 MQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHh-cCcccccCHHHHHH
Confidence            99998 59999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG0196|consensus

Probab=99.59  E-value=3.4e-16  Score=101.86  Aligned_cols=88  Identities=20%  Similarity=0.283  Sum_probs=75.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELA-EGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|.|||.+....++.++||||+|+++|+.+ .|..|+-...+.+.+..|..+- +.+++-..+..+..||.-||++|..
T Consensus       798 iRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy-RLPpPmDCP~aL~qLMldCWqkdR~  876 (996)
T KOG0196|consen  798 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY-RLPPPMDCPAALYQLMLDCWQKDRN  876 (996)
T ss_pred             eeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc-CCCCCCCCcHHHHHHHHHHHHHHhh
Confidence            3589999999999999999999999999966 5999999988888888876654 3333346688899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      .||++.||+.
T Consensus       877 ~RP~F~qiV~  886 (996)
T KOG0196|consen  877 RRPKFAQIVS  886 (996)
T ss_pred             cCCCHHHHHH
Confidence            9999999984

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.58  E-value=4.8e-15  Score=88.46  Aligned_cols=88  Identities=16%  Similarity=0.149  Sum_probs=60.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------------HHHHHhhccCCCCCCCCCcCCcHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--------------PMRALFQIPRNPPPQLTKRFDCVLLC   67 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (108)
                      .|+|||.+.+..++.++|+||+|+++++++++..+.....              .....................+..+.
T Consensus       177 ~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05079         177 FWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVY  256 (284)
T ss_pred             cccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHH
Confidence            4899999888888899999999999999998765432110              00001111111111111223467899


Q ss_pred             HHHHHHhhcCCCCCCCHHHHhc
Q psy2811          68 DFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +++.+||+.+|.+||++.++++
T Consensus       257 ~li~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         257 QLMRKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             HHHHHHccCCcccCcCHHHHHH
Confidence            9999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.58  E-value=4.5e-15  Score=88.28  Aligned_cols=88  Identities=18%  Similarity=0.224  Sum_probs=63.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--------------HHHhhccCCCCCCCCCcCCcHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM--------------RALFQIPRNPPPQLTKRFDCVLLC   67 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~   67 (108)
                      .|++||.+.+..++.++|+||+|++++++++|..|+......              ...................+.++.
T Consensus       177 ~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05038         177 FWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVY  256 (284)
T ss_pred             cccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHH
Confidence            388999998888888999999999999999998887543211              111111111111111223457888


Q ss_pred             HHHHHHhhcCCCCCCCHHHHhc
Q psy2811          68 DFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +++.+||..+|++||++.++++
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         257 DLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.58  E-value=2e-14  Score=85.22  Aligned_cols=87  Identities=22%  Similarity=0.257  Sum_probs=60.8

Q ss_pred             cccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCC----CCCCcCCcHHHHHH
Q psy2811           2 SVIACEQQLD-------MSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPP----QLTKRFDCVLLCDF   69 (108)
Q Consensus         2 ~y~ape~~~~-------~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l   69 (108)
                      .|++||++..       ..++.++|+||+|++++++++ |..||......+....+......    .......+..+.++
T Consensus       166 ~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  245 (268)
T cd05086         166 RWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEV  245 (268)
T ss_pred             cccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHH
Confidence            5899998743       234668999999999999986 56788776655544443222211    11111246678889


Q ss_pred             HHHHhhcCCCCCCCHHHHhc
Q psy2811          70 VNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        70 ~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +..|| .+|.+||+++++++
T Consensus       246 ~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         246 LQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHh-hCcccCCCHHHHHH
Confidence            99999 67999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0586|consensus

Probab=99.57  E-value=1.1e-15  Score=96.76  Aligned_cols=97  Identities=19%  Similarity=0.195  Sum_probs=81.0

Q ss_pred             CccccccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDA-RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~-~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|.|||++.+..|+. .+|+|++|+++|.++.|..||.+.+......+...+...-..  ..+.+++++++++|..+|.
T Consensus       218 ppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~--~ms~dce~lLrk~lvl~Ps  295 (596)
T KOG0586|consen  218 PPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF--YMSCDCEDLLRKFLVLNPS  295 (596)
T ss_pred             CCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc--eeechhHHHHHHhhccCcc
Confidence            4699999999988865 699999999999999999999988766655555555444322  5678899999999999999


Q ss_pred             CCCCHHHHhcCccccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~~   99 (108)
                      +|.++.+++.|.|.......
T Consensus       296 kr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  296 KRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             ccCCHHHhhhhcccchhhhh
Confidence            99999999999999766544

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.57  E-value=6e-15  Score=98.74  Aligned_cols=88  Identities=18%  Similarity=0.138  Sum_probs=64.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc-cCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI-PRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||............ ...+.........+..+.+++.+|+..||+
T Consensus       195 ~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~  274 (932)
T PRK13184        195 PDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPA  274 (932)
T ss_pred             CCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChh
Confidence            3699999999988999999999999999999999999775543322221 111111111123467788999999999999


Q ss_pred             CCCCHHHHh
Q psy2811          80 ERPFAKELL   88 (108)
Q Consensus        80 ~R~~~~~~l   88 (108)
                      +|++..+.+
T Consensus       275 kR~ss~eeL  283 (932)
T PRK13184        275 ERYSSVQEL  283 (932)
T ss_pred             hCcCHHHHH
Confidence            998754444

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.57  E-value=3.3e-15  Score=101.32  Aligned_cols=90  Identities=19%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhc----------cCCCCCCC-C-CcCCcH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQI----------PRNPPPQL-T-KRFDCV   64 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~----------~~~~~~~~-~-~~~~~~   64 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|+.||.....    .....+.          ........ . ......
T Consensus       842 ~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  921 (968)
T PLN00113        842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIV  921 (968)
T ss_pred             ccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHH
Confidence            369999999998999999999999999999999999853211    0000000          00000000 0 001123


Q ss_pred             HHHHHHHHHhhcCCCCCCCHHHHhcC
Q psy2811          65 LLCDFVNECLRKDLEERPFAKELLRH   90 (108)
Q Consensus        65 ~~~~l~~~~l~~~p~~R~~~~~~l~~   90 (108)
                      ++.+++.+||+.+|++||+++++++.
T Consensus       922 ~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        922 EVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            56688899999999999999999854

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.57  E-value=1.6e-14  Score=86.18  Aligned_cols=87  Identities=20%  Similarity=0.219  Sum_probs=60.7

Q ss_pred             cccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---------------HHHhhccCCCCCCCCCcCCcHHHH
Q psy2811           3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM---------------RALFQIPRNPPPQLTKRFDCVLLC   67 (108)
Q Consensus         3 y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~   67 (108)
                      |++||.+.+..++.++|+||+|++++++++|..++......               ..+..+.............+..+.
T Consensus       177 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (284)
T cd05081         177 WYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIY  256 (284)
T ss_pred             eeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHH
Confidence            89999998888899999999999999999976554322110               000011111111111223467899


Q ss_pred             HHHHHHhhcCCCCCCCHHHHhc
Q psy2811          68 DFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +++.+||..+|++||++.++++
T Consensus       257 ~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         257 AIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHHHHccCChhhCCCHHHHHH
Confidence            9999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0669|consensus

Probab=99.53  E-value=3.8e-14  Score=82.71  Aligned_cols=95  Identities=21%  Similarity=0.204  Sum_probs=71.2

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CC------------------CCCCC-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NP------------------PPQLT-   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~------------------~~~~~-   58 (108)
                      .|.+||.+.| ..|+++.|+|+-||++.+|.++.+.+++.....++..|..   .-                  .++.+ 
T Consensus       193 wYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~  272 (376)
T KOG0669|consen  193 WYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPK  272 (376)
T ss_pred             ecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCc
Confidence            5899999877 6689999999999999999999999988766554443311   00                  00000 


Q ss_pred             -----------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          59 -----------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        59 -----------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                 +.....+..+++..++..||.+|+++.+++.|.||..-
T Consensus       273 ~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  273 GQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             chhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence                       00113467799999999999999999999999999543

>KOG0195|consensus

Probab=99.53  E-value=2.6e-14  Score=84.33  Aligned_cols=88  Identities=22%  Similarity=0.283  Sum_probs=73.9

Q ss_pred             CccccccccccCCCCc---chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQLDMSYDA---RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~---~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      |.||+||.++...-+.   +.|+|||++++|++.+...||....++++-.++.........+...+.....++.-|++.|
T Consensus       350 pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmned  429 (448)
T KOG0195|consen  350 PAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNED  429 (448)
T ss_pred             cccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCC
Confidence            6799999987655432   6999999999999999999999998888877777666655555567788889999999999


Q ss_pred             CCCCCCHHHHh
Q psy2811          78 LEERPFAKELL   88 (108)
Q Consensus        78 p~~R~~~~~~l   88 (108)
                      |.+||.+..++
T Consensus       430 pgkrpkfdmiv  440 (448)
T KOG0195|consen  430 PGKRPKFDMIV  440 (448)
T ss_pred             CCcCCCcceeh
Confidence            99999988765

>KOG1035|consensus

Probab=99.52  E-value=5.1e-14  Score=95.19  Aligned_cols=90  Identities=27%  Similarity=0.356  Sum_probs=68.4

Q ss_pred             cccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhc
Q psy2811           3 VIACEQQLDMS---YDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRK   76 (108)
Q Consensus         3 y~ape~~~~~~---~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~   76 (108)
                      |+|||++.+..   |+.|+|+||+|+++++|+.   ||.... ...++..+..+..+....  ......-+.+|+.+++.
T Consensus       781 YvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~h  857 (1351)
T KOG1035|consen  781 YVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSH  857 (1351)
T ss_pred             eecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcC
Confidence            99999997744   8999999999999999985   565543 334566666555544411  11234455899999999


Q ss_pred             CCCCCCCHHHHhcCccccc
Q psy2811          77 DLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~   95 (108)
                      ||.+|||+.|+|++.|+-.
T Consensus       858 dP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  858 DPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             CCccCCCHHHHhhccCCCc
Confidence            9999999999999999873

>KOG0608|consensus

Probab=99.51  E-value=2.3e-14  Score=92.30  Aligned_cols=95  Identities=21%  Similarity=0.256  Sum_probs=72.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC--CCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ--LTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      ++|+|||++...+|+..+|+|+.|++||+|+.|++||......++..++..-....  ......+.++.++|.++. .++
T Consensus       835 ~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sa  913 (1034)
T KOG0608|consen  835 PNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSA  913 (1034)
T ss_pred             CcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cCh
Confidence            57999999999999999999999999999999999998876655555544332211  112234778888887643 566


Q ss_pred             CCCC---CHHHHhcCcccccc
Q psy2811          79 EERP---FAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~---~~~~~l~~~~~~~~   96 (108)
                      +.|+   ..++|..||||++.
T Consensus       914 d~RLGkng~d~vKaHpfFkgI  934 (1034)
T KOG0608|consen  914 DSRLGKNGADQVKAHPFFKGI  934 (1034)
T ss_pred             hhhhcccchhhhhcCcccccc
Confidence            7787   37789999999865

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.51  E-value=1.4e-13  Score=87.93  Aligned_cols=95  Identities=11%  Similarity=0.052  Sum_probs=62.0

Q ss_pred             CccccccccccCC--------------------CC--cchhHHHHHHHHHHHHhCCC-CCCCCCHHH-----------HH
Q psy2811           1 MSVIACEQQLDMS--------------------YD--ARCDIWSLGITAIELAEGDP-PLSDLHPMR-----------AL   46 (108)
Q Consensus         1 ~~y~ape~~~~~~--------------------~~--~~~dv~s~g~~l~~~~~g~~-~~~~~~~~~-----------~~   46 (108)
                      +.|++||.+....                    ++  .+.|+||+|+++++|+++.. |+.......           ..
T Consensus       374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~  453 (507)
T PLN03224        374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRW  453 (507)
T ss_pred             cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHH
Confidence            4699999875422                    11  24799999999999999864 664321111           01


Q ss_pred             hhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC---CCCCCHHHHhcCccccc
Q psy2811          47 FQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL---EERPFAKELLRHPLLKK   95 (108)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p---~~R~~~~~~l~~~~~~~   95 (108)
                      ................+....+++.++|..++   .+|+++.|+|+||||..
T Consensus       454 r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        454 RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            11111111111112346778899999999766   68999999999999964

>KOG0666|consensus

Probab=99.50  E-value=7.6e-14  Score=83.42  Aligned_cols=95  Identities=22%  Similarity=0.280  Sum_probs=67.2

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHhhc---cCCCCCC------------
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHP---------MRALFQI---PRNPPPQ------------   56 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---------~~~~~~~---~~~~~~~------------   56 (108)
                      .|.|||.+.|.. |+.+.|+|++||++.++++-.+.|.+...         .+++.+|   ...+...            
T Consensus       204 WYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q  283 (438)
T KOG0666|consen  204 WYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQ  283 (438)
T ss_pred             EecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchH
Confidence            589999998855 78899999999999999998887765421         1222222   1111000            


Q ss_pred             ----------CCC----------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 ----------LTK----------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ----------~~~----------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                ...          ...++...+++.++|+.||.+|.++++.++|+||...
T Consensus       284 ~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  284 TLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             HHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence                      000          0123346789999999999999999999999999866

>KOG4236|consensus

Probab=99.47  E-value=3.1e-15  Score=94.63  Aligned_cols=95  Identities=20%  Similarity=0.241  Sum_probs=77.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |.|+|||+++..+|..+.|+||+|+++|-.++|..||.... ..+++++....-++.+. ...+.+..+||..+|+..-.
T Consensus       730 PAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW-~eis~~AidlIn~LLqVkm~  808 (888)
T KOG4236|consen  730 PAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPW-SEISPEAIDLINNLLQVKMR  808 (888)
T ss_pred             ccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCch-hhcCHHHHHHHHHHHHHHHH
Confidence            67999999999999999999999999999999999997653 34444433333233222 24578888999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +|.+....+.|+|+++-
T Consensus       809 kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  809 KRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HhcchHhhccchhhhcc
Confidence            99999999999999865

>KOG1094|consensus

Probab=99.43  E-value=3.1e-13  Score=86.36  Aligned_cols=89  Identities=21%  Similarity=0.290  Sum_probs=67.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh--CCCCCCCCCHHHHHhhc---cCCCCC---CCCCcCCcHHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE--GDPPLSDLHPMRALFQI---PRNPPP---QLTKRFDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~--g~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~l~~~   72 (108)
                      +.|||+|.+..+.+++++|+|+||+.+|+++.  ...||......+...+.   ......   ...+...+.++.++|.+
T Consensus       703 iRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~  782 (807)
T KOG1094|consen  703 IRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLR  782 (807)
T ss_pred             eeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHH
Confidence            36999999999999999999999999999875  56888776554443322   111111   11222457788899999


Q ss_pred             HhhcCCCCCCCHHHHhc
Q psy2811          73 CLRKDLEERPFAKELLR   89 (108)
Q Consensus        73 ~l~~~p~~R~~~~~~l~   89 (108)
                      ||+.+.++||+++++..
T Consensus       783 Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  783 CWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HhchhhhcCCCHHHHHH
Confidence            99999999999999864

>KOG1025|consensus

Probab=99.41  E-value=8.5e-13  Score=87.14  Aligned_cols=87  Identities=22%  Similarity=0.304  Sum_probs=71.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||-|.+....|+..+|||++|+.+|+++| |..|+.+....++-..+..+.. ...+...+.++.-++.+||..|+.
T Consensus       864 ikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-LsqPpiCtiDVy~~mvkCwmid~~  942 (1177)
T KOG1025|consen  864 IKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQPPICTIDVYMVMVKCWMIDAD  942 (1177)
T ss_pred             cHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCCCCCccHHHHHHHHHHhccCcc
Confidence            46899999999999999999999999999886 8999999877665544444433 333336678888899999999999


Q ss_pred             CCCCHHHHh
Q psy2811          80 ERPFAKELL   88 (108)
Q Consensus        80 ~R~~~~~~l   88 (108)
                      .||+++++.
T Consensus       943 ~rp~fkel~  951 (1177)
T KOG1025|consen  943 SRPTFKELA  951 (1177)
T ss_pred             cCccHHHHH
Confidence            999988765

>KOG1151|consensus

Probab=99.39  E-value=3.7e-13  Score=84.05  Aligned_cols=95  Identities=19%  Similarity=0.213  Sum_probs=71.3

Q ss_pred             ccccccccccC----CCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHh--hccCCC-CCCCCCcCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQLDM----SYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALF--QIPRNP-PPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~~~----~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~--~~~~~~-~~~~~~~~~~~~~~~l~~~~   73 (108)
                      .|++||.+...    ..+.++||||+|+++|..+.|+.||..... .+++.  .|.... ..++.....+.+.++||++|
T Consensus       645 WYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRC  724 (775)
T KOG1151|consen  645 WYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRC  724 (775)
T ss_pred             eecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHH
Confidence            48999997543    367799999999999999999999976532 22221  122222 22223335678899999999


Q ss_pred             hhcCCCCCCCHHHHhcCcccccc
Q psy2811          74 LRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      |.+.-++|.+..++..||+|...
T Consensus       725 LaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  725 LAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             HHhhhhhhhhHHHHccCccccch
Confidence            99999999999999999999654

>KOG0668|consensus

Probab=99.38  E-value=2.4e-12  Score=74.41  Aligned_cols=95  Identities=24%  Similarity=0.333  Sum_probs=67.4

Q ss_pred             ccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCC-CCCCHHHHHhhccC--------------------------CC-
Q psy2811           3 VIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPL-SDLHPMRALFQIPR--------------------------NP-   53 (108)
Q Consensus         3 y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~-~~~~~~~~~~~~~~--------------------------~~-   53 (108)
                      |--||.+.. ..|+.+.|+||+||++..|...+.|| .+.+..+++.+|..                          +. 
T Consensus       198 fKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~  277 (338)
T KOG0668|consen  198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRH  277 (338)
T ss_pred             cCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcc
Confidence            346887765 55788999999999999998876665 55555555444310                          00 


Q ss_pred             -CC----CCC---CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          54 -PP----QLT---KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        54 -~~----~~~---~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                       ..    +..   ....+++..+|+.++|..|.+.|+|+.|.+.||||....
T Consensus       278 ~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~  329 (338)
T KOG0668|consen  278 SRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR  329 (338)
T ss_pred             ccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence             00    000   001257888999999999999999999999999997553

>KOG0662|consensus

Probab=99.35  E-value=7.4e-12  Score=70.14  Aligned_cols=96  Identities=23%  Similarity=0.261  Sum_probs=70.6

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccC---CCC----------------CCCCCc
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPR---NPP----------------PQLTKR   60 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~---~~~----------------~~~~~~   60 (108)
                      .|.+|.++.+ .-|+++.|+||-||++.++.. |.+.|.+.+..+++.+|..   .+.                +..+..
T Consensus       166 wyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypat  245 (292)
T KOG0662|consen  166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPAT  245 (292)
T ss_pred             eccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCcccc
Confidence            4789999887 457889999999999999985 8888988876665554411   110                000000


Q ss_pred             C--------CcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          61 F--------DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        61 ~--------~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .        ....-++++++++..+|.+|.+++..++||||.+..
T Consensus       246 tswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s  290 (292)
T KOG0662|consen  246 TSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS  290 (292)
T ss_pred             chHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence            0        123456899999999999999999999999998764

>KOG0606|consensus

Probab=99.33  E-value=2.9e-12  Score=86.15  Aligned_cols=97  Identities=22%  Similarity=0.168  Sum_probs=81.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC-cCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |.|.|||++.-++|+..+|+|++|+++|+.+-|..||.+...++.+..+.......+.. .....+.++++..+|+.+|.
T Consensus       222 PeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~  301 (1205)
T KOG0606|consen  222 PEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPL  301 (1205)
T ss_pred             ccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChH
Confidence            67999999999999999999999999999999999999998888777766654443322 23378899999999999999


Q ss_pred             CCC---CHHHHhcCccccccc
Q psy2811          80 ERP---FAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~---~~~~~l~~~~~~~~~   97 (108)
                      .|.   ..-++.+|.||+...
T Consensus       302 ~Rlgt~ga~evk~h~ff~~LD  322 (1205)
T KOG0606|consen  302 CRLGTGGALEVKQHGFFQLLD  322 (1205)
T ss_pred             hhcccchhhhhhhccceeecc
Confidence            996   467788999998653

>KOG1167|consensus

Probab=99.32  E-value=1.1e-12  Score=80.34  Aligned_cols=97  Identities=22%  Similarity=0.331  Sum_probs=66.3

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHh-------------------h--ccC-CC---
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALF-------------------Q--IPR-NP---   53 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~-------------------~--~~~-~~---   53 (108)
                      ++|.|||++.. ..-++++|+||.|+++..++++..||-.. +..+.+.                   +  +.. ..   
T Consensus       241 ~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~  320 (418)
T KOG1167|consen  241 PGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPT  320 (418)
T ss_pred             CCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccc
Confidence            57999999866 44577899999999999999998887321 1110000                   0  000 00   


Q ss_pred             --------------------C----CCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          54 --------------------P----PQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        54 --------------------~----~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                                          .    ........+..+.+++.+|+..+|.+|.++++.|+||||....
T Consensus       321 ~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~  388 (418)
T KOG1167|consen  321 IPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD  388 (418)
T ss_pred             cHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence                                0    0000112244778999999999999999999999999998654

>KOG0664|consensus

Probab=99.29  E-value=4.3e-12  Score=75.15  Aligned_cols=98  Identities=23%  Similarity=0.237  Sum_probs=69.0

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc-----------------------cCCCCCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI-----------------------PRNPPPQL   57 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~-----------------------~~~~~~~~   57 (108)
                      .|.|||++.| ..|+.+.||||+||++.+++..+..|+..++.+++..|                       .+.....+
T Consensus       222 YYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~P  301 (449)
T KOG0664|consen  222 YYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAP  301 (449)
T ss_pred             HhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCC
Confidence            3889999988 45889999999999999999988888755443322221                       22221111


Q ss_pred             C---------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          58 T---------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        58 ~---------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      .         ......+...++..++..||.+|.+-.+.+.|++.....-.
T Consensus       302 s~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~r  352 (449)
T KOG0664|consen  302 DTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRLR  352 (449)
T ss_pred             CccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccccee
Confidence            1         00123456677888999999999999999999998766443

>KOG1187|consensus

Probab=99.28  E-value=1.2e-11  Score=76.50  Aligned_cols=89  Identities=20%  Similarity=0.372  Sum_probs=59.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---H---HHH-HhhccCC-----CCCCCC-CcCC----c
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH---P---MRA-LFQIPRN-----PPPQLT-KRFD----C   63 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---~---~~~-~~~~~~~-----~~~~~~-~~~~----~   63 (108)
                      .+|++||.+.....+.++||||||+++.++++|+.+.....   .   .+- ...+...     ..+... ....    -
T Consensus       242 ~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~  321 (361)
T KOG1187|consen  242 FGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEV  321 (361)
T ss_pred             CccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHH
Confidence            37999999988888999999999999999999997776432   1   110 0011111     011111 1111    2


Q ss_pred             HHHHHHHHHHhhcCCCCCCCHHHHhc
Q psy2811          64 VLLCDFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        64 ~~~~~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      ..+..+..+|++.+|+.||++.++++
T Consensus       322 ~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  322 KKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            23556677999999999999999753

>KOG0590|consensus

Probab=99.26  E-value=1.4e-12  Score=84.84  Aligned_cols=94  Identities=21%  Similarity=0.219  Sum_probs=70.8

Q ss_pred             ccccccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCHHHHHh-h--------ccCCCCCCCCCcCCcHHHHHHHH
Q psy2811           2 SVIACEQQLDMSYDA-RCDIWSLGITAIELAEGDPPLSDLHPMRALF-Q--------IPRNPPPQLTKRFDCVLLCDFVN   71 (108)
Q Consensus         2 ~y~ape~~~~~~~~~-~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~l~~   71 (108)
                      .|+|||.+.+..|++ ..||||.|++++.|..|+.||.-....+... .        +..+... +. ...+...+.+|.
T Consensus       489 pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~lp~~~~~~~~  566 (601)
T KOG0590|consen  489 PYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNR-LL-SLLPRETRIIIY  566 (601)
T ss_pred             cCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHH-HH-HhchhhHHHHHH
Confidence            499999999999988 5999999999999999999997654332210 0        0111000 00 123567788999


Q ss_pred             HHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          72 ECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ++|+.+|.+|.++.+|++.+||+...
T Consensus       567 ~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  567 RMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHccCChhheecHHHHhhChHhhhcc
Confidence            99999999999999999999998764

>KOG0576|consensus

Probab=99.22  E-value=2.4e-11  Score=78.74  Aligned_cols=96  Identities=43%  Similarity=0.653  Sum_probs=72.8

Q ss_pred             Cccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC---CcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT---KRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l   74 (108)
                      |.|||||+..   ...|...+|+|+.|+...++..-++|.-...++..+.......+..+.   ....+..+.+|++.++
T Consensus       176 pywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~al  255 (829)
T KOG0576|consen  176 PYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGAL  255 (829)
T ss_pred             ccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHh
Confidence            5699999863   466888999999999988888777776555555555444333332222   1223678999999999


Q ss_pred             hcCCCCCCCHHHHhcCcccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ..+|++||+++.++.|+|+...
T Consensus       256 tknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  256 TKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             cCCCccCCChhhheeceeeccc
Confidence            9999999999999999999766

>KOG1033|consensus

Probab=99.14  E-value=5.2e-11  Score=75.08  Aligned_cols=88  Identities=25%  Similarity=0.264  Sum_probs=62.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .||+||++.+..|+.++|||++|.++++++. -...+...   ..+.-+..+..+.... ...++-..|+..++...|..
T Consensus       427 ~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~r~g~ip~~~~-~d~p~e~~ll~~lls~~p~~  502 (516)
T KOG1033|consen  427 LYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI---ATLTDIRDGIIPPEFL-QDYPEEYTLLQQLLSPSPEE  502 (516)
T ss_pred             ccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH---HhhhhhhcCCCChHHh-hcCcHHHHHHHHhcCCCccc
Confidence            5999999999999999999999999999986 22222221   2223333443332221 33455568999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      ||++-+.-.|.|.
T Consensus       503 RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  503 RPSAIEVALHEFL  515 (516)
T ss_pred             CchHHHHhhhhhc
Confidence            9977776666664

>KOG0984|consensus

Probab=99.11  E-value=6.8e-11  Score=67.50  Aligned_cols=59  Identities=36%  Similarity=0.557  Sum_probs=48.9

Q ss_pred             cccccccccc----CCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhccCCCCCCCCCc
Q psy2811           2 SVIACEQQLD----MSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQLTKR   60 (108)
Q Consensus         2 ~y~ape~~~~----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~   60 (108)
                      -|||||.+..    ..|+.++||||+|+.+.++.+++.|+... .+.+++.++...+.+.++..
T Consensus       213 pYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp~~  276 (282)
T KOG0984|consen  213 PYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLPAD  276 (282)
T ss_pred             ccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCccc
Confidence            3999999853    46889999999999999999999999764 56788888888877776643

>KOG0603|consensus

Probab=99.11  E-value=8.3e-11  Score=75.50  Aligned_cols=87  Identities=18%  Similarity=0.199  Sum_probs=69.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|||||++.  ++....|.|++|++.+++++|..||.+    ++..+|.......+.  ..+....+++..++..+|.+|
T Consensus       158 eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~--~l~~~a~~~~~~l~~r~p~nr  229 (612)
T KOG0603|consen  158 EYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR--ELSAEARSLFRQLFKRNPENR  229 (612)
T ss_pred             hhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch--hhhHHHHHHHHHHHhhCHHHH
Confidence            599999987  667789999999999999999999988    444455443333322  456778899999999999999


Q ss_pred             CC-----HHHHhcCcccccc
Q psy2811          82 PF-----AKELLRHPLLKKG   96 (108)
Q Consensus        82 ~~-----~~~~l~~~~~~~~   96 (108)
                      ..     ..++++|+||...
T Consensus       230 Lg~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  230 LGAGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             hccCcchhHHHhccchheee
Confidence            74     5788999999755

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.06  E-value=5.4e-10  Score=63.33  Aligned_cols=57  Identities=44%  Similarity=0.647  Sum_probs=50.6

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|++||.+... ..+.+.|+|++|++++++                                 ..+.+++..|+..+|++
T Consensus       158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~l~~~l~~~p~~  204 (215)
T cd00180         158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------PELKDLIRKMLQKDPEK  204 (215)
T ss_pred             CccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------HHHHHHHHHHhhCCccc
Confidence            58899988776 677889999999999998                                 57789999999999999


Q ss_pred             CCCHHHHhcCc
Q psy2811          81 RPFAKELLRHP   91 (108)
Q Consensus        81 R~~~~~~l~~~   91 (108)
                      |+++.++++++
T Consensus       205 R~~~~~l~~~~  215 (215)
T cd00180         205 RPSAKEILEHL  215 (215)
T ss_pred             CcCHHHHhhCC
Confidence            99999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0606|consensus

Probab=98.86  E-value=6.2e-09  Score=70.83  Aligned_cols=98  Identities=23%  Similarity=0.281  Sum_probs=82.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|.+||...+.......|+|+.|..+++.++|.+||.......++..+.....+.+. +...+.+..+++.+.+..++.
T Consensus       999 ~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~ 1078 (1205)
T KOG0606|consen  999 PDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPT 1078 (1205)
T ss_pred             CcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCch
Confidence            4699999999999999999999999999999999999998888888777766555433 233477888999999999999


Q ss_pred             CCCCHH---HHhcCcccccccc
Q psy2811          80 ERPFAK---ELLRHPLLKKGAQ   98 (108)
Q Consensus        80 ~R~~~~---~~l~~~~~~~~~~   98 (108)
                      +|..+.   ++..|+||+...-
T Consensus      1079 qr~~a~~~~e~k~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1079 QRLGAKGAAEVKGHPFFQDVDW 1100 (1205)
T ss_pred             hccCcccccccccCCccCCCCc
Confidence            999866   7889999987643

>KOG1023|consensus

Probab=98.78  E-value=2e-08  Score=64.03  Aligned_cols=87  Identities=18%  Similarity=0.180  Sum_probs=60.2

Q ss_pred             ccccccccccCC-------CCcchhHHHHHHHHHHHHhCCCCCCCCC----HHHHHhhccCCCCCCCCCc-----CCcHH
Q psy2811           2 SVIACEQQLDMS-------YDARCDIWSLGITAIELAEGDPPLSDLH----PMRALFQIPRNPPPQLTKR-----FDCVL   65 (108)
Q Consensus         2 ~y~ape~~~~~~-------~~~~~dv~s~g~~l~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~-----~~~~~   65 (108)
                      -|.|||.+.+..       .+.+.|+||+|++++++++...||....    ..+...++.........+.     .....
T Consensus       116 lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~  195 (484)
T KOG1023|consen  116 LWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPE  195 (484)
T ss_pred             hccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchH
Confidence            378999987642       2456999999999999999999987532    2334444444121111111     11335


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHh
Q psy2811          66 LCDFVNECLRKDLEERPFAKELL   88 (108)
Q Consensus        66 ~~~l~~~~l~~~p~~R~~~~~~l   88 (108)
                      +..+++.||..+|..||++.++-
T Consensus       196 l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  196 LLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             HHHHHHHhcccChhhCccHHHHH
Confidence            77899999999999999998875

>KOG1240|consensus

Probab=98.74  E-value=9.1e-09  Score=70.53  Aligned_cols=85  Identities=24%  Similarity=0.292  Sum_probs=58.1

Q ss_pred             ccccccccccCC-----------CCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCC---CCCCCcCCcHHH
Q psy2811           2 SVIACEQQLDMS-----------YDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPP---PQLTKRFDCVLL   66 (108)
Q Consensus         2 ~y~ape~~~~~~-----------~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~   66 (108)
                      +|+|||.+....           .+++=||+|.||++.|++. |+++|...    ++.....+..   ...........+
T Consensus       192 CYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS----QL~aYr~~~~~~~e~~Le~Ied~~~  267 (1431)
T KOG1240|consen  192 CYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS----QLLAYRSGNADDPEQLLEKIEDVSL  267 (1431)
T ss_pred             eecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----HHHhHhccCccCHHHHHHhCcCccH
Confidence            699999986422           3456799999999999986 78888432    1222222210   001111224578


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHhcC
Q psy2811          67 CDFVNECLRKDLEERPFAKELLRH   90 (108)
Q Consensus        67 ~~l~~~~l~~~p~~R~~~~~~l~~   90 (108)
                      +.++..|++.||++|.++++.|+.
T Consensus       268 Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  268 RNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHHHHccCchhccCHHHHHHh
Confidence            899999999999999999999865

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.64  E-value=7.2e-08  Score=55.48  Aligned_cols=52  Identities=27%  Similarity=0.197  Sum_probs=40.2

Q ss_pred             cccccccc-ccCCCCcchhHHHHHHHHHHHHhCCCCCCC-CCHH-HHHhhccCCC
Q psy2811           2 SVIACEQQ-LDMSYDARCDIWSLGITAIELAEGDPPLSD-LHPM-RALFQIPRNP   53 (108)
Q Consensus         2 ~y~ape~~-~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~-~~~~-~~~~~~~~~~   53 (108)
                      .|++||.+ ....++.++|+|++|++++++++|..||.. .+.. .....+..+.
T Consensus       164 ~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      164 FYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             CcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            48899988 566677799999999999999999999977 4433 4445555444

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG2052|consensus

Probab=98.58  E-value=3.8e-08  Score=61.71  Aligned_cols=87  Identities=17%  Similarity=0.211  Sum_probs=52.2

Q ss_pred             ccccccccccC----CCCc--chhHHHHHHHHHHHHh-----C-----CCCCCCCC-----HHHHHhhccCCCCCCC---
Q psy2811           2 SVIACEQQLDM----SYDA--RCDIWSLGITAIELAE-----G-----DPPLSDLH-----PMRALFQIPRNPPPQL---   57 (108)
Q Consensus         2 ~y~ape~~~~~----~~~~--~~dv~s~g~~l~~~~~-----g-----~~~~~~~~-----~~~~~~~~~~~~~~~~---   57 (108)
                      .|||||++...    .++.  .+||||||.++||+..     |     ++||...-     -.+...-+.....++.   
T Consensus       385 RYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipn  464 (513)
T KOG2052|consen  385 RYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPN  464 (513)
T ss_pred             eccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCc
Confidence            49999998542    2332  5899999999999984     2     35664321     1222211222111111   


Q ss_pred             --CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHh
Q psy2811          58 --TKRFDCVLLCDFVNECLRKDLEERPFAKELL   88 (108)
Q Consensus        58 --~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l   88 (108)
                        .....-..+..+|+.||..+|..|.++-.+.
T Consensus       465 rW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  465 RWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence              1111123456788999999999999876664

>KOG4158|consensus

Probab=98.56  E-value=3e-07  Score=57.65  Aligned_cols=98  Identities=17%  Similarity=0.152  Sum_probs=62.8

Q ss_pred             cccccccccCC--C----CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHh-hccCCCCCCCCCcCCcHHHHHHHHHHhh
Q psy2811           3 VIACEQQLDMS--Y----DARCDIWSLGITAIELAEGDPPLSDLHPMRALF-QIPRNPPPQLTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         3 y~ape~~~~~~--~----~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~   75 (108)
                      -||||+..-..  .    -.+.|.|+.|.+.|+++....||.+...+.... .......+..+ +..+..+++++.-+|+
T Consensus       417 lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp-~~vpp~~rqlV~~lL~  495 (598)
T KOG4158|consen  417 LMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALP-SRVPPVARQLVFDLLK  495 (598)
T ss_pred             ecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCc-ccCChHHHHHHHHHhc
Confidence            47899864321  1    137999999999999999999997643222111 12222233323 2457788899999999


Q ss_pred             cCCCCCCCH---HHHhc------Ccccccccccch
Q psy2811          76 KDLEERPFA---KELLR------HPLLKKGAQLAH  101 (108)
Q Consensus        76 ~~p~~R~~~---~~~l~------~~~~~~~~~~~~  101 (108)
                      .||++|++.   ..+++      |.|++..+....
T Consensus       496 r~pskRvsp~iAANvl~LsLw~~~~~vka~~~~~~  530 (598)
T KOG4158|consen  496 RDPSKRVSPNIAANVLNLSLWRMGEDVKAMMEKCG  530 (598)
T ss_pred             CCccccCCccHHHhHHHHHHhcCchHHHHhccccc
Confidence            999999973   33443      455555444433

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.49  E-value=9.2e-08  Score=57.58  Aligned_cols=74  Identities=22%  Similarity=0.153  Sum_probs=47.1

Q ss_pred             ccccccccccC--------CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQLDM--------SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~~~--------~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~   73 (108)
                      .|.+||.....        .++.+.|.|++|+++|.+..+..||...........      ....+...+..++.+|.++
T Consensus       207 ~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~l  280 (288)
T PF14531_consen  207 AFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCRDMPEPVQFLIRGL  280 (288)
T ss_dssp             TTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS---HHHHHHHHHH
T ss_pred             ccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cchhcCCcCHHHHHHHHHH
Confidence            46677765332        356789999999999999999999976543211110      1111224467889999999


Q ss_pred             hhcCCCCC
Q psy2811          74 LRKDLEER   81 (108)
Q Consensus        74 l~~~p~~R   81 (108)
                      |+.+|.+|
T Consensus       281 L~~~~~~R  288 (288)
T PF14531_consen  281 LQRNPEDR  288 (288)
T ss_dssp             T-SSGGGS
T ss_pred             ccCCcccC
Confidence            99999887

>KOG3653|consensus

Probab=98.44  E-value=4.4e-07  Score=57.49  Aligned_cols=84  Identities=21%  Similarity=0.320  Sum_probs=49.7

Q ss_pred             ccccccccccC-CCC-----cchhHHHHHHHHHHHHhCCC------------CCCC-----CCHHHHHhhccCCCCC-CC
Q psy2811           2 SVIACEQQLDM-SYD-----ARCDIWSLGITAIELAEGDP------------PLSD-----LHPMRALFQIPRNPPP-QL   57 (108)
Q Consensus         2 ~y~ape~~~~~-~~~-----~~~dv~s~g~~l~~~~~g~~------------~~~~-----~~~~~~~~~~~~~~~~-~~   57 (108)
                      .|||||++.+. ++.     ...||||+|.++|++++.-.            ||+.     ....+....+.+...+ ..
T Consensus       383 RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~  462 (534)
T KOG3653|consen  383 RYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKI  462 (534)
T ss_pred             hhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCC
Confidence            59999999762 222     25899999999999997432            2221     0111111111111111 11


Q ss_pred             C----CcCCcHHHHHHHHHHhhcCCCCCCCHH
Q psy2811          58 T----KRFDCVLLCDFVNECLRKDLEERPFAK   85 (108)
Q Consensus        58 ~----~~~~~~~~~~l~~~~l~~~p~~R~~~~   85 (108)
                      +    .......+.+.+.-||..|++.|.|+.
T Consensus       463 p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  463 PDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             hhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            1    111245577888999999999999854

>KOG4250|consensus

Probab=98.41  E-value=1.3e-07  Score=62.20  Aligned_cols=39  Identities=31%  Similarity=0.485  Sum_probs=34.4

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCC
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSD   39 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~   39 (108)
                      ++|.+||.+.. ..|+..+|.||+|+++|+..||..||..
T Consensus       187 ~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  187 EEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             hhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            36999999984 7788899999999999999999998854

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.41  E-value=3.9e-06  Score=50.31  Aligned_cols=94  Identities=31%  Similarity=0.366  Sum_probs=66.0

Q ss_pred             cccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCC-CCCCcCC------cHHHH
Q psy2811           2 SVIACEQQLD---MSYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPP-QLTKRFD------CVLLC   67 (108)
Q Consensus         2 ~y~ape~~~~---~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~------~~~~~   67 (108)
                      .|++||.+.+   ..+....|+|++|++++.++.|..|+.....    ......+.....+ .......      .....
T Consensus       173 ~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (384)
T COG0515         173 GYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAAS  252 (384)
T ss_pred             ccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHH
Confidence            5899999987   4677789999999999999999998776652    2322222222222 1111111      24678


Q ss_pred             HHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          68 DFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                      +++..++..+|..|.+..+...+.+...
T Consensus       253 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         253 DLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             HHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence            9999999999999999888777755543

>KOG2137|consensus

Probab=98.25  E-value=2.8e-07  Score=60.57  Aligned_cols=105  Identities=18%  Similarity=0.133  Sum_probs=72.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHH-hCCCCCCCCCHHH--HHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELA-EGDPPLSDLHPMR--ALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~-~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      +.|.+||.+.+.-.+.++|++|+|+++|.+. .|...+.......  .......+..........+.++++-+.+++..+
T Consensus       173 ~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~  252 (700)
T KOG2137|consen  173 LNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGD  252 (700)
T ss_pred             cccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCC
Confidence            3689999998877778999999999999888 4544443332111  111111111111111234678889999999999


Q ss_pred             CCCCCCHHHHhcCcccccccccchhhhh
Q psy2811          78 LEERPFAKELLRHPLLKKGAQLAHQELT  105 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~~~~~~~~~~  105 (108)
                      ...||++..+...+||.+..-.....++
T Consensus       253 ~~~rp~~~~l~~~~ff~D~~~~aLrfLD  280 (700)
T KOG2137|consen  253 SAVRPTLDLLLSIPFFSDPGLKALRFLD  280 (700)
T ss_pred             cccCcchhhhhcccccCCchhhhhhhcc
Confidence            9999999999999999988766655444

>KOG0590|consensus

Probab=98.14  E-value=5.2e-07  Score=59.49  Aligned_cols=95  Identities=21%  Similarity=0.178  Sum_probs=68.8

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH-hhccCC--CCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRAL-FQIPRN--PPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||...+..| ....|+||.|+++..+++|..|+......... ......  ...............+++.+++..
T Consensus       193 ~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~  272 (601)
T KOG0590|consen  193 PPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKE  272 (601)
T ss_pred             CCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccC
Confidence            46999999888655 55799999999999999999988765443321 111111  101112223456677889999999


Q ss_pred             CCCCCCCHHHHhcCccccc
Q psy2811          77 DLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~   95 (108)
                      +|..|.+.+++..++|+..
T Consensus       273 ~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  273 NPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             Cchhccccccccccccccc
Confidence            9999999999999999987

>KOG1266|consensus

Probab=97.92  E-value=1.7e-05  Score=48.89  Aligned_cols=89  Identities=22%  Similarity=0.237  Sum_probs=56.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCC-CCCC---CHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPP-LSDL---HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      ++|.+||.=.-...+.++|||++|....++..+..- -.+.   ...+...+...+.        ....-++++.+|++.
T Consensus       246 ~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l--------en~lqr~~i~kcl~~  317 (458)
T KOG1266|consen  246 PGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL--------ENGLQRGSITKCLEG  317 (458)
T ss_pred             CccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec--------cCccccCcCcccccC
Confidence            356666653334445689999999888888766433 1111   1122222222211        111223678999999


Q ss_pred             CCCCCCCHHHHhcCccccccc
Q psy2811          77 DLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .|..||++++++.||.+-.+-
T Consensus       318 eP~~rp~ar~llfHpllfeVh  338 (458)
T KOG1266|consen  318 EPNGRPDARLLLFHPLLFEVH  338 (458)
T ss_pred             CCCCCcchhhhhcCceeeecc
Confidence            999999999999999876553

>KOG1345|consensus

Probab=97.86  E-value=8.7e-06  Score=48.92  Aligned_cols=92  Identities=17%  Similarity=0.116  Sum_probs=56.6

Q ss_pred             ccccccccc---cCCC--CcchhHHHHHHHHHHHHhCCCCCCCCCHHH----HHhhccCCCCCCCCCc--CCcHHHHHHH
Q psy2811           2 SVIACEQQL---DMSY--DARCDIWSLGITAIELAEGDPPLSDLHPMR----ALFQIPRNPPPQLTKR--FDCVLLCDFV   70 (108)
Q Consensus         2 ~y~ape~~~---~~~~--~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~l~   70 (108)
                      .|.+||...   ++.+  .+.+|+|.||++++..++|..|++.....+    ...+......+..+..  ..+..+..+.
T Consensus       185 ~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~F  264 (378)
T KOG1345|consen  185 NYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLF  264 (378)
T ss_pred             ccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHH
Confidence            366777643   2333  567999999999999999999998542221    1222222222222211  2356677889


Q ss_pred             HHHhhcCCCCCCCHHHH---hcCccc
Q psy2811          71 NECLRKDLEERPFAKEL---LRHPLL   93 (108)
Q Consensus        71 ~~~l~~~p~~R~~~~~~---l~~~~~   93 (108)
                      ++-|..+++.|-.+.++   ....|.
T Consensus       265 kk~lt~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  265 KKSLTPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             HHhcCCcccccchhHHHHHHHHHHHH
Confidence            99999999999544443   334454

>KOG1152|consensus

Probab=97.76  E-value=4.5e-06  Score=54.54  Aligned_cols=38  Identities=26%  Similarity=0.323  Sum_probs=32.3

Q ss_pred             CccccccccccCCCCc-chhHHHHHHHHHHHHhCCCCCC
Q psy2811           1 MSVIACEQQLDMSYDA-RCDIWSLGITAIELAEGDPPLS   38 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~-~~dv~s~g~~l~~~~~g~~~~~   38 (108)
                      ++|.|||++.|+.|-. ..|||++|+++|.+.....||.
T Consensus       732 v~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  732 VDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             ccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            4699999999999855 5999999999998887777764

>KOG0601|consensus

Probab=96.47  E-value=0.0036  Score=41.15  Aligned_cols=92  Identities=20%  Similarity=0.025  Sum_probs=59.2

Q ss_pred             cccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCCC
Q psy2811           3 VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERP   82 (108)
Q Consensus         3 y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~   82 (108)
                      |++||... ..++...|++++|.+..+...+......... .....+.....+.-.....+..+...+..++..++..|+
T Consensus       294 Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~-~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~  371 (524)
T KOG0601|consen  294 YAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKN-SSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRL  371 (524)
T ss_pred             EeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCC-CCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhh
Confidence            88888764 4457789999999988887776544433210 011111111111111123345555678889999999999


Q ss_pred             CHHHHhcCcccccc
Q psy2811          83 FAKELLRHPLLKKG   96 (108)
Q Consensus        83 ~~~~~l~~~~~~~~   96 (108)
                      +...++.++++...
T Consensus       372 ~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  372 TAQILTALNVIHSK  385 (524)
T ss_pred             HHHHHhccccccch
Confidence            99999999988744

>KOG1164|consensus

Probab=96.41  E-value=0.017  Score=35.77  Aligned_cols=87  Identities=18%  Similarity=0.154  Sum_probs=57.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH---HHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMR---ALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|+++....+...+.+-|+||++.++.++..|..|+.+.....   ...+..............+.++..+...+-..+.
T Consensus       202 ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (322)
T KOG1164|consen  202 RYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDY  281 (322)
T ss_pred             ccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCC
Confidence            4777777777888889999999999999999999997654321   1111111111110111335667777777777888


Q ss_pred             CCCCCHHHHh
Q psy2811          79 EERPFAKELL   88 (108)
Q Consensus        79 ~~R~~~~~~l   88 (108)
                      ..+|....+.
T Consensus       282 ~~~Pdy~~~~  291 (322)
T KOG1164|consen  282 EDKPDYEKLA  291 (322)
T ss_pred             cCCCCHHHHH
Confidence            8999866654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=94.81  E-value=0.27  Score=32.43  Aligned_cols=40  Identities=23%  Similarity=0.252  Sum_probs=30.0

Q ss_pred             Cccccccccc-----cCCCCcchhHHHHHHHHHHHHhC-CCCCCCC
Q psy2811           1 MSVIACEQQL-----DMSYDARCDIWSLGITAIELAEG-DPPLSDL   40 (108)
Q Consensus         1 ~~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~   40 (108)
                      ++|.+||...     +-..+...|.+.+|+++++++.| +.||++.
T Consensus       180 ~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         180 SEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             cccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            3688898754     22234568999999999998865 8999765

>KOG1093|consensus

Probab=94.71  E-value=0.013  Score=39.04  Aligned_cols=81  Identities=21%  Similarity=0.283  Sum_probs=49.8

Q ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCCCCCCC-------cCCcHHHHHHHHHHhhcCCCCCCCHH
Q psy2811          16 ARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPPQLTK-------RFDCVLLCDFVNECLRKDLEERPFAK   85 (108)
Q Consensus        16 ~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~~~~l~~~~l~~~p~~R~~~~   85 (108)
                      .++|||++|.++.++.-|...+......+....+..   ........       -........+.+.|+-..|+.||...
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~  189 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM  189 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence            589999999999998877655544433222222111   11100000       01123344677789999999999888


Q ss_pred             HHhcCcccccc
Q psy2811          86 ELLRHPLLKKG   96 (108)
Q Consensus        86 ~~l~~~~~~~~   96 (108)
                      ++.++.-|..+
T Consensus       190 ~~~k~~i~~ev  200 (725)
T KOG1093|consen  190 ELSKRCSFTEV  200 (725)
T ss_pred             HHhcCccHHHH
Confidence            88888877654

>KOG1035|consensus

Probab=91.90  E-value=0.3  Score=35.85  Aligned_cols=87  Identities=29%  Similarity=0.391  Sum_probs=54.3

Q ss_pred             cccccccccCCCCc--chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           3 VIACEQQLDMSYDA--RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         3 y~ape~~~~~~~~~--~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.+++......+..  ..|+|.+|.....+..|...-.....          ....... .......+...+|+..++++
T Consensus       356 ~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~~~----------~~~~l~~-~~~~~~~d~~~~~~~~~~~~  424 (1351)
T KOG1035|consen  356 RNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKSAV----------PVSLLDV-LSTSELLDALPKCLDEDSEE  424 (1351)
T ss_pred             cccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccccc----------hhhhhcc-ccchhhhhhhhhhcchhhhh
Confidence            34455544444443  36999999998888776533221110          0011111 11114557788999999999


Q ss_pred             CCCHHHHhcCcccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~~  100 (108)
                      |+.+.+++.|+|.+......
T Consensus       425 Rl~~~~ll~~~f~~~~~~~~  444 (1351)
T KOG1035|consen  425 RLSALELLTHPFLRFPTDNE  444 (1351)
T ss_pred             ccchhhhhhchhcccccccc
Confidence            99999999999987654433

>KOG0576|consensus

Probab=89.12  E-value=0.071  Score=36.51  Aligned_cols=97  Identities=24%  Similarity=0.155  Sum_probs=60.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCC-cCC-cHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTK-RFD-CVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~-~~~~~~l~~~~l~~~   77 (108)
                      +.+++||+.....+....|.|+.+.-.-++..|.+|-...  ......+..++... ... ... ...-.++...|+..-
T Consensus       394 ~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P--~~~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~  471 (829)
T KOG0576|consen  394 PEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSP--PAVLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGL  471 (829)
T ss_pred             CCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCC--ccccCCCCCCCCccccchhhhcCcccccCCcccccCCC
Confidence            4689999999999999999999997766777776665442  11222222222111 000 001 112224667788888


Q ss_pred             CCCCCCHHHHhcCccccccccc
Q psy2811          78 LEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      |..|+.....+.|.+|.+..-.
T Consensus       472 P~~pkv~mgacfsKvfngCpl~  493 (829)
T KOG0576|consen  472 PPTPKVHMGACFSKVFNGCPLR  493 (829)
T ss_pred             CCCCcchhhHHHHHHhccCccc
Confidence            8888888888888888766433

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	108
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-25
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		8e-23
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		4e-21
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-21
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-21
3a7f_A	303	Human Mst3 Kinase Length = 303		5e-21
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		5e-21
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-21
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-16
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-16
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		4e-16
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-16
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-16
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-16
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		6e-16
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		9e-16
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		9e-16
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-15
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-15
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		7e-14
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		7e-14
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-13
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		5e-13
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		1e-11
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-11
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		1e-10
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-10
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-10
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-10
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-10
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-10
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-10
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-10
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		3e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		4e-10
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-09
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-09
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		7e-09
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		6e-08
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		9e-06
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		1e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-05
3gni_B	389	Structure Of Strad And Mo25 Length = 389		6e-05
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		7e-05
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-04
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		7e-04

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score =  110 bits (274), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/92 (51%), Positives = 65/92 (70%)
Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD + D+WSLGITAIE+AEG PPL D+HPMRALF IPRNP P+L  +  
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW 259
Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                 F+  CL K+  +RP  ++L++HP ++
Sbjct: 260 SKKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score =  101 bits (252), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD++ DIWSLGITAIELA+G+PP SD+HPMR LF IP+N PP L   F      +F++ 
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDF-TKSFKEFIDA 254
Query: 73  CLRKDLEERPFAKELLRHPLLKKGAQ 98
           CL KD   RP AKELL+H  + K ++
Sbjct: 255 CLNKDPSFRPTAKELLKHKFIVKNSK 280

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD++ DIWSLGITAIELA G+PP S+LHPM+ LF IP+N PP L   +    L +FV  
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEA 258
Query: 73  CLRKDLEERPFAKELLRHPLLKKGAQ 98
           CL K+   RP AKELL+H  + + A+
Sbjct: 259 CLNKEPSFRPTAKELLKHKFILRNAK 284

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD++ DIWSLGITAIELA G+PP S+LHPM+ LF IP+N PP L   +    L +FV  
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEA 238
Query: 73  CLRKDLEERPFAKELLRHPLLKKGAQ 98
           CL K+   RP AKELL+H  + + A+
Sbjct: 239 CLNKEPSFRPTAKELLKHKFILRNAK 264

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD++ DIWSLGITAIELA G+PP S+LHPM+ LF IP+N PP L   +    L +FV  
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEA 238
Query: 73  CLRKDLEERPFAKELLRHPLLKKGAQ 98
           CL K+   RP AKELL+H  + + A+
Sbjct: 239 CLNKEPSFRPTAKELLKHKFILRNAK 264

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD++ DIWSLGITAIELA G+PP S+LHPM+ LF IP+N PP L   +    L +FV  
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEA 253
Query: 73  CLRKDLEERPFAKELLRHPLLKKGAQ 98
           CL K+   RP AKELL+H  + + A+
Sbjct: 254 CLNKEPSFRPTAKELLKHKFILRNAK 279

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           +YD + DIWSLGITAIELA+G+PP SDLHPMR LF IP+N PP L  +       +FV  
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKP-FKEFVEA 250
Query: 73  CLRKDLEERPFAKELLRHPLLKK 95
           CL KD   RP AKELL+H  + +
Sbjct: 251 CLNKDPRFRPTAKELLKHKFITR 273

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDF 69
           ++ Y+   DIWSLGITAIE+AEG PP +D+HPMRA+F IP NPPP   K         DF
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDF 258
Query: 70  VNECLRKDLEERPFAKELLRHPLLKKGAQLA 100
           V +CL K  E+R  A +LL+HP ++    ++
Sbjct: 259 VKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--R 60
           V+ CE   D  YD + D+WSLGIT IE+AE +PP  +L+PMR L +I ++ PP L +  R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
           +      DF+ +CL K+++ R    +LL+HP +   +    +EL
Sbjct: 266 WSSNFK-DFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 308

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--R 60
           V+ CE   D  YD + D+WSLGIT IE+AE +PP  +L+PMR L +I ++ PP L +  R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
           +      DF+ +CL K+++ R    +LL+HP +   +    +EL
Sbjct: 266 WSSNFK-DFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 308

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--R 60
           V+ CE   D  YD + D+WSLGIT IE+AE +PP  +L+PMR L +I ++ PP L +  R
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 265
Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
           +      DF+ +CL K+++ R    +LL+HP +
Sbjct: 266 WSSN-FKDFLKKCLEKNVDARWTTSQLLQHPFV 297

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRF 61
           V+ CE   D  YD + DIWSLGIT IE+A+ +PP  +L+PMR L +I ++ PP  LT   
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK 247
Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
             V   DF+   L K+ E RP A +LL HP +
Sbjct: 248 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRF 61
           V+ CE   D  YD + DIWSLGIT IE+A+ +PP  +L+PMR L +I ++ PP  LT   
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK 239
Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLL 93
             V   DF+   L K+ E RP A +LL HP +
Sbjct: 240 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDFVN 71
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251
Query: 72  ECLRKDLEERPFAKELLRHPLLK 94
            CL  D+E+R  AKELL+H  LK
Sbjct: 252 RCLEMDVEKRGSAKELLQHQFLK 274

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDFVN 71
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 252
Query: 72  ECLRKDLEERPFAKELLRHPLLK 94
            CL  D+E+R  AKEL++H  LK
Sbjct: 253 RCLEMDVEKRGSAKELIQHQFLK 275

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDFVN 71
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251
Query: 72  ECLRKDLEERPFAKELLRHPLLK 94
            CL  D+E+R  AKELL+H  LK
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFLK 274

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDFVN 71
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 251
Query: 72  ECLRKDLEERPFAKELLRHPLLK 94
            CL  D+E+R  AKELL+H  LK
Sbjct: 252 RCLDMDVEKRGSAKELLQHQFLK 274

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK-RFDCVLLCDFVN 71
           +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN 252
Query: 72  ECLRKDLEERPFAKELLRHPLLK 94
            CL  D+E+R  AKEL++H  LK
Sbjct: 253 RCLEMDVEKRGSAKELIQHQFLK 275

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 50/80 (62%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD + D+WSLGIT IELAE  PPL +++ M AL+ I +N  P L          +FV+ C
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 250
Query: 74  LRKDLEERPFAKELLRHPLL 93
           L+K  ++RP ++ LL+H  +
Sbjct: 251 LQKIPQDRPTSEVLLKHRFV 270

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 72.0 bits (175), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD + D+WSLGIT IELAE  PPL +++ M AL+ I +N  P L          +FV+ C
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 289
Query: 74  LRKDLEERPFAKELLRH 90
           L+K  ++RP ++ LL+H
Sbjct: 290 LQKIPQDRPTSEVLLKH 306

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDF-- 69
            YD + DIWS GITAIELA G  P     PM+ L    +N PP L T   D  +L  +  
Sbjct: 198 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 257
Query: 70  -----VNECLRKDLEERPFAKELLRHPLLKK 95
                ++ CL+KD E+RP A ELLRH   +K
Sbjct: 258 SFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDF-- 69
            YD + DIWS GITAIELA G  P     PM+ L    +N PP L T   D  +L  +  
Sbjct: 203 GYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGK 262
Query: 70  -----VNECLRKDLEERPFAKELLRHPLLKK 95
                ++ CL+KD E+RP A ELLRH   +K
Sbjct: 263 SFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFVNE 72
           Y    DIWSLGI  IE+ +G+PP     P++A+ ++  +PPP+L        +L DF+  
Sbjct: 218 YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLER 277
Query: 73  CLRKDLEERPFAKELLRHPLL 93
            L +D +ER  A+ELL HP L
Sbjct: 278 MLVRDPQERATAQELLDHPFL 298

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIPRNPPPQLT---KRFDCVLLCDF 69
           YD R D+WSLGIT  ELA G  P    + +   L Q+ +  PPQL+   +R       +F
Sbjct: 206 YDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINF 265
Query: 70  VNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELTYWC 108
           VN CL KD  +RP  KELL+HP +    + A +   Y C
Sbjct: 266 VNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVC 304

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCDFVN 71
            Y  + DIWSLGIT IELA    P      P + L Q+   P PQL          DF +
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 248
Query: 72  ECLRKDLEERPFAKELLRHPLL----KKGAQLA 100
           +CL+K+ +ERP   EL++HP       KG  +A
Sbjct: 249 QCLKKNSKERPTYPELMQHPFFTLHESKGTDVA 281

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           Y  + DIWSLGIT IELA    P      P + L Q+   P PQL          DF ++
Sbjct: 234 YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ 293
Query: 73  CLRKDLEERPFAKELLRHPLL 93
           CL+K+ +ERP   EL++HP  
Sbjct: 294 CLKKNSKERPTYPELMQHPFF 314

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFVNE 72
           Y    DIWSLGI  IE+ +G+PP  +  P++A+  I  N PP+L         L  F++ 
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 252
Query: 73  CLRKDLEERPFAKELLRHPLLKKGA 97
            L +D  +R  A ELL+HP L K  
Sbjct: 253 LLVRDPAQRATAAELLKHPFLAKAG 277

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFVNE 72
           Y    DIWSLGI  IE+ +G+PP  +  P++A+  I  N PP+L         L  F++ 
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 261
Query: 73  CLRKDLEERPFAKELLRHPLLKKGA 97
            L +D  +R  A ELL+HP L K  
Sbjct: 262 LLVRDPAQRATAAELLKHPFLAKAG 286

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFVNE 72
           Y    DIWSLGI  IE+ +G+PP  +  P++A+  I  N PP+L         L  F++ 
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 256
Query: 73  CLRKDLEERPFAKELLRHPLLKKGA 97
            L +D  +R  A ELL+HP L K  
Sbjct: 257 LLVRDPAQRATAAELLKHPFLAKAG 281

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFVNE 72
           Y    DIWSLGI  IE+ +G+PP  +  P++A+  I  N PP+L         L  F++ 
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDR 263
Query: 73  CLRKDLEERPFAKELLRHPLLKKGA 97
            L +D  +R  A ELL+HP L K  
Sbjct: 264 LLVRDPAQRATAAELLKHPFLAKAG 288

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFV 70
           + Y    DIWSLGI  IE+ +G+PP  +  P++A+  I  N PP+L         L  F+
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 304
Query: 71  NECLRKDLEERPFAKELLRHPLLKKGA 97
           +  L +D  +R  A ELL+HP L K  
Sbjct: 305 DRLLVRDPAQRATAAELLKHPFLAKAG 331

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLCDFV 70
           + Y    DIWSLGI  IE+ +G+PP  +  P++A+  I  N PP+L         L  F+
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFL 381
Query: 71  NECLRKDLEERPFAKELLRHPLLKKGA 97
           +  L +D  +R  A ELL+HP L K  
Sbjct: 382 DRLLVRDPAQRATAAELLKHPFLAKAG 408

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCDFVN 71
            Y  + DIWSLGIT IELA    P      P + L Q+   P PQL          DF +
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 275
Query: 72  ECLRKDLEERPFAKELLRHPLL----KKGAQLA 100
           +CL+K+ +ERP   EL +HP       KG  +A
Sbjct: 276 QCLKKNSKERPTYPELXQHPFFTLHESKGTDVA 308

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ----IPRNPPPQL 57
           S ++ E+     Y  + DIWS+G++ +E+A G  P+       A+F+    I   PPP+L
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKL 246
Query: 58  TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 +   DFVN+CL K+  ER   K+L+ H  +K+
Sbjct: 247 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 284

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPL------SDLHPMRALFQ----IPR 51
           S ++ E+     Y  + DIWS+G++ +E+A G  P+       D  P  A+F+    I  
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVN 227
Query: 52  NPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
            PPP+L      +   DFVN+CL K+  ER   K+L+ H  +K+
Sbjct: 228 EPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 271

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRF 61
           S ++ E+     Y  + DIWS+G++ +E+A G  P   +     L  I   PPP+L    
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAV 230
Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
             +   DFVN+CL K+  ER   K+L+ H  +K+
Sbjct: 231 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 264

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC-VLLCDFVNE 72
           Y    DIWSLGI  IE+ +G+PP  +  P++A+ +I  + PP++        +L  F++ 
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDL 277
Query: 73  CLRKDLEERPFAKELLRHPLLK 94
            L ++  +R  A+ELL HP LK
Sbjct: 278 MLVREPSQRATAQELLGHPFLK 299

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTKRFDCVL-LCDFVN 71
           YD R D+WSLGI+ +ELA G  P  +       L ++ +  PP L            FV 
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVK 265
Query: 72  ECLRKDLEERPFAKELLRHPLLKK 95
           +CL KD  +RP   +LL H  +K+
Sbjct: 266 DCLTKDHRKRPKYNKLLEHSFIKR 289

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 42/136 (30%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLS----------------------- 38
           S ++ E+     Y  + DIWS+G++ +E+A G  P+                        
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 39  ---------------DLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKDLE 79
                          D  P  A+F+    I   PPP+L      +   DFVN+CL K+  
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 80  ERPFAKELLRHPLLKK 95
           ER   K+L+ H  +K+
Sbjct: 288 ERADLKQLMVHAFIKR 303

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 42/136 (30%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLS----------------------- 38
           S ++ E+     Y  + DIWS+G++ +E+A G  P+                        
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 39  ---------------DLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKDLE 79
                          D  P  A+F+    I   PPP+L      +   DFVN+CL K+  
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 80  ERPFAKELLRHPLLKK 95
           ER   K+L+ H  +K+
Sbjct: 288 ERADLKQLMVHAFIKR 303

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 42/136 (30%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLS----------------------- 38
           S ++ E+     Y  + DIWS+G++ +E+A G  P+                        
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 39  ---------------DLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKDLE 79
                          D  P  A+F+    I   PPP+L      +   DFVN+CL K+  
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 80  ERPFAKELLRHPLLKK 95
           ER   K+L+ H  +K+
Sbjct: 288 ERADLKQLMVHAFIKR 303

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 42/136 (30%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLS----------------------- 38
           S ++ E+     Y  + DIWS+G++ +E+A G  P+                        
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 289
Query: 39  ---------------DLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKDLE 79
                          D  P  A+F+    I   PPP+L      +   DFVN+CL K+  
Sbjct: 290 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPA 349
Query: 80  ERPFAKELLRHPLLKK 95
           ER   K+L+ H  +K+
Sbjct: 350 ERADLKQLMVHAFIKR 365

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 42/136 (30%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLS----------------------- 38
           S ++ E+     Y  + DIWS+G++ +E+A G  P+                        
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 254
Query: 39  ---------------DLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKDLE 79
                          D  P  A+F+    I   PPP+L      +   DFVN+CL K+  
Sbjct: 255 PRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 314
Query: 80  ERPFAKELLRHPLLKK 95
           ER   K+L+ H  +K+
Sbjct: 315 ERADLKQLMVHAFIKR 330

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 54/136 (39%), Gaps = 42/136 (30%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPL------------------------ 37
           S ++ E+     Y  + DIWS+G++ +E+A G  P+                        
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 38  --------------SDLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKDLE 79
                          D  P  A+F+    I   PPP+L      +   DFVN+CL K+  
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 80  ERPFAKELLRHPLLKK 95
           ER   K+L+ H  +K+
Sbjct: 288 ERADLKQLMVHAFIKR 303

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPR-NPPPQLTKRFDCVLLCDFV 70
            Y    DIWSLG T IE+A G PP  +L  P  A+F++      P++ +         F+
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA-FI 259
Query: 71  NECLRKDLEERPFAKELLRHPLLK 94
            +C   D ++R  A +LL    LK
Sbjct: 260 LKCFEPDPDKRACANDLLVDEFLK 283

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPR-NPPPQLTKRFDCVLLCDFV 70
            Y    DIWSLG T IE+A G PP  +L  P  A+F++      P++ +         F+
Sbjct: 187 GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA-FI 245
Query: 71  NECLRKDLEERPFAKELLRHPLLK 94
            +C   D ++R  A +LL    LK
Sbjct: 246 LKCFEPDPDKRACANDLLVDEFLK 269

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 44/141 (31%)
Query: 8   QQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ------------------- 48
           QQ    YDA+ DI+S+GITA ELA G  P  D+   + L +                   
Sbjct: 208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 267
Query: 49  ---------------------IPR----NPPPQLTKRFDCVLLCDFVNECLRKDLEERPF 83
                                 PR    + P     R        FV +CL+++ + RP 
Sbjct: 268 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327
Query: 84  AKELLRHPLLKKGAQLAHQEL 104
           A  LL H   K+  + A + L
Sbjct: 328 ASTLLNHSFFKQIKRRASEAL 348

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 44/141 (31%)
Query: 8   QQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ------------------- 48
           QQ    YDA+ DI+S+GITA ELA G  P  D+   + L +                   
Sbjct: 192 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 251
Query: 49  ---------------------IPR----NPPPQLTKRFDCVLLCDFVNECLRKDLEERPF 83
                                 PR    + P     R        FV +CL+++ + RP 
Sbjct: 252 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 311
Query: 84  AKELLRHPLLKKGAQLAHQEL 104
           A  LL H   K+  + A + L
Sbjct: 312 ASTLLNHSFFKQIKRRASEAL 332

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 28/110 (25%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC------ 67
           YD  CDIWSLGI    +  G  P ++          P + P ++  R             
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANG---------PSDTPEEILTRIGSGKFTLSGGNW 252
Query: 68  --------DFVNECLRKDLEERPFAKELLRHPLLKKG-----AQLAHQEL 104
                   D V++ L  D  +R  AK++L+HP + +      +QL+HQ+L
Sbjct: 253 NTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDL 302

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 28/110 (25%)
Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC------ 67
           YD  CDIWSLGI    +  G  P ++          P + P ++  R             
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANG---------PSDTPEEILTRIGSGKFTLSGGNW 252
Query: 68  --------DFVNECLRKDLEERPFAKELLRHPLLKKG-----AQLAHQEL 104
                   D V++ L  D  +R  AK++L+HP + +      +QL+HQ+L
Sbjct: 253 NTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDL 302

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 51/140 (36%), Gaps = 46/140 (32%)
Query: 2   SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLS----------------------- 38
           S +A E+     Y  + DIWS+G++ +ELA G  P+                        
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEP 237
Query: 39  -------------------DLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLR 75
                              D  P  A+F+    I   PPP+L          +FVN+CL 
Sbjct: 238 HSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLI 297
Query: 76  KDLEERPFAKELLRHPLLKK 95
           K+  ER   K L  H  +K+
Sbjct: 298 KNPAERADLKMLTNHTFIKR 317

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 10  LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVL--LC 67
           L   YD +CD+WS+G+    L  G PP         L ++ +      +  +  V     
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK 269
Query: 68  DFVNECLRKDLEERPFAKELLRHPLLKK 95
           D + + L+ D + R  A++ L HP +K+
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKE 297

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	108
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-49
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-47
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-45
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-44
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-43
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	8e-41
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-40
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-40
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-37
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-37
3an0_A	340	Dual specificity mitogen-activated protein kinase;	8e-37
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-36
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	4e-35
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-33
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-28
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-28
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-25
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-23
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	8e-20
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	9e-20
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-19
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-17
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-16
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-16
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-15
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-15
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-15
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-15
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-09
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	5e-09
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	9e-09
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	4e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-08
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-07
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-07
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-07
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-07
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	8e-07
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	8e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	9e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-06
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-06
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	4e-06
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	6e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	6e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-06
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	8e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-05
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	2e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	2e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-05
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-05
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-05
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	6e-05
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	7e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	9e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-04
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-04
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-04
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	5e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-04

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  157 bits (400), Expect = 3e-49
 Identities = 47/93 (50%), Positives = 65/93 (69%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VIAC++  D +YD + D+WSLGITAIE+AEG PPL D+HPMRALF IPRNP P+L  +  
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW 259

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 F+  CL K+  +RP  ++L++HP ++ 
Sbjct: 260 SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  152 bits (386), Expect = 2e-47
 Identities = 41/94 (43%), Positives = 55/94 (58%), Gaps = 1/94 (1%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           V+ CE   D  YD + DIWSLGIT IE+A+ +PP  +L+PMR L +I ++ PP L     
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK 247

Query: 63  -CVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
             V   DF+   L K+ E RP A +LL HP +  
Sbjct: 248 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  146 bits (371), Expect = 4e-45
 Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD++ DIWSLGITAIELA G+PP S+LHPM+ LF IP+N PP L   +    L +FV  C
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY-SKPLKEFVEAC 254

Query: 74  LRKDLEERPFAKELLRHPLLKKGA 97
           L K+   RP AKELL+H  + + A
Sbjct: 255 LNKEPSFRPTAKELLKHKFILRNA 278

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  144 bits (366), Expect = 6e-44
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           VI    +    YD + D+WSLGIT IELAE  PPL +++ M AL+ I +N  P L     
Sbjct: 221 VILAMDEG--QYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW 278

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG 96
                +FV+ CL+K  ++RP ++ LL+H  + + 
Sbjct: 279 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  142 bits (361), Expect = 1e-43
 Identities = 44/86 (51%), Positives = 57/86 (66%), Gaps = 1/86 (1%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD-CVLLCDF 69
           ++ Y+   DIWSLGITAIE+AEG PP +D+HPMRA+F IP NPPP   K         DF
Sbjct: 199 EIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDF 258

Query: 70  VNECLRKDLEERPFAKELLRHPLLKK 95
           V +CL K  E+R  A +LL+HP ++ 
Sbjct: 259 VKQCLVKSPEQRATATQLLQHPFVRS 284

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  135 bits (342), Expect = 8e-41
 Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 1/84 (1%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC-VLLCDFVNE 72
           Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L        +  DF+N 
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 252

Query: 73  CLRKDLEERPFAKELLRHPLLKKG 96
           CL  D+E+R  AKELL+H  LK  
Sbjct: 253 CLEMDVEKRGSAKELLQHQFLKIA 276

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  135 bits (341), Expect = 1e-40
 Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 8/90 (8%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC------ 67
           YD + DIWS GITAIELA G  P     PM+ L    +N PP L        +       
Sbjct: 204 YDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKS 263

Query: 68  --DFVNECLRKDLEERPFAKELLRHPLLKK 95
               ++ CL+KD E+RP A ELLRH   +K
Sbjct: 264 FRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  135 bits (341), Expect = 2e-40
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC-VLLCDF 69
              Y    DIWSLGI  IE+ +G+PP     P++A+ ++  +PPP+L        +L DF
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDF 274

Query: 70  VNECLRKDLEERPFAKELLRHPLLKKGAQLA 100
           +   L +D +ER  A+ELL HP L +     
Sbjct: 275 LERMLVRDPQERATAQELLDHPFLLQTGLPE 305

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  127 bits (321), Expect = 2e-37
 Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 1   MS--VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIPRNPPPQL 57
           M+   I         YD R D+WSLGIT  ELA G  P    + +   L Q+ +  PPQL
Sbjct: 192 MAPERIDPSAS-RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL 250

Query: 58  TKRFDCV---LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
           +   +        +FVN CL KD  +RP  KELL+HP +  
Sbjct: 251 SNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM 291

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  126 bits (318), Expect = 3e-37
 Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 4/98 (4%)

Query: 1   MS--VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQL 57
           M+   I  E      Y  + DIWSLGIT IELA    P      P + L Q+   P PQL
Sbjct: 176 MAPERINPELN-QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 234

Query: 58  TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                     DF ++CL+K+ +ERP   EL++HP    
Sbjct: 235 PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  124 bits (313), Expect = 3e-36
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 14/104 (13%)

Query: 1   MS--VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQL 57
           M+   I         YD R D+WSLGI+ +ELA G  P  +       L ++ +  PP L
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL 250

Query: 58  ------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 +  F       FV +CL KD  +RP   +LL H  +K+
Sbjct: 251 PGHMGFSGDF-----QSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  122 bits (308), Expect = 4e-35
 Identities = 34/142 (23%), Positives = 48/142 (33%), Gaps = 44/142 (30%)

Query: 8   QQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC 67
           QQ    YDA+ DI+S+GITA ELA G  P  D+   + L +      P L          
Sbjct: 208 QQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEE 267

Query: 68  --------------------------------------------DFVNECLRKDLEERPF 83
                                                        FV +CL+++ + RP 
Sbjct: 268 LTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327

Query: 84  AKELLRHPLLKKGAQLAHQELT 105
           A  LL H   K+  + A + L 
Sbjct: 328 ASTLLNHSFFKQIKRRASEALP 349

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  116 bits (293), Expect = 3e-33
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 3/91 (3%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC-VLLCDFVNE 72
            DA+ DIWS     + +  G  P +         +I   PPP       C  L    + E
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQE 292

Query: 73  CLRKDLEERPFAKELLRHP--LLKKGAQLAH 101
            LRK+   R  A EL R     L++   L  
Sbjct: 293 GLRKEPVHRASAMELRRKVGKALQEVGGLKS 323

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  102 bits (256), Expect = 5e-28
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPR-NPPPQLTKR 60
           +I    +    Y    DIWSLG T IE+A G PP  +L  P  A+F++      P++ + 
Sbjct: 194 II---DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPES 250

Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
                   F+ +C   D ++R  A +LL    LK  ++
Sbjct: 251 MSAEAK-AFILKCFEPDPDKRACANDLLVDEFLKVSSK 287

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  101 bits (254), Expect = 8e-28
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI--PRNPPPQLTKRFDCVLLCDFVN 71
           YD   D+++ G+  +E+A  + P S+      +++       P    K     +  + + 
Sbjct: 206 YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK-EIIE 264

Query: 72  ECLRKDLEERPFAKELLRHPLLKK 95
            C+R++ +ER   K+LL H   ++
Sbjct: 265 GCIRQNKDERYSIKDLLNHAFFQE 288

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 94.3 bits (235), Expect = 5e-25
 Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 9   QLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCD 68
           Q + ++  + DI++L +T +  A  +P   +        +I +   P++ +        +
Sbjct: 203 QENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQGRLPRIPQVLS-QEFTE 258

Query: 69  FVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
            +   +  D E RP A  L++H +L   ++
Sbjct: 259 LLKVMIHPDPERRPSAMALVKHSVLLSASR 288

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 89.5 bits (222), Expect = 6e-23
 Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 42/125 (33%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPL----------------------------------- 37
            Y  + DIWS+G++ +E+A G  P+                                   
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265

Query: 38  ---SDLHPMRALF----QIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRH 90
               D  P  A+F     I   PPP+L      +   DFVN+CL K+  ER   K+L+ H
Sbjct: 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325

Query: 91  PLLKK 95
             +K+
Sbjct: 326 AFIKR 330

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 80.9 bits (200), Expect = 8e-20
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 1/88 (1%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFV 70
           +  Y+ + DIW+LG    EL               + +I     P ++  +    L   V
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYS-YDLRSLV 257

Query: 71  NECLRKDLEERPFAKELLRHPLLKKGAQ 98
           ++  +++  +RP    +L    + K  +
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAKRIE 285

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 80.5 bits (199), Expect = 9e-20
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 14  YDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE 72
           Y+ + D++SLGI   E+       +  ++ ++ L  +    PP         +    +  
Sbjct: 208 YNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKM-KVEKKIIRL 266

Query: 73  CLRKDLEERPFAKELLRHPLLKKGAQ 98
            +  D  +RP A+ LL    L    Q
Sbjct: 267 LIDHDPNKRPGARTLLNSGWLPVKHQ 292

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 80.1 bits (198), Expect = 1e-19
 Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ--IPRNPPPQLTKRFDCVLLCDFV 70
           SY    D++SLG+T +E+A            + L Q  +P      L+           +
Sbjct: 231 SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSEL-----RSVL 285

Query: 71  NECLRKDLEERPFAKELLRHPLLKK 95
              L  D + R  A+ LL  P+L++
Sbjct: 286 VMMLEPDPKLRATAEALLALPVLRQ 310

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 72.3 bits (178), Expect = 9e-17
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPP-LSDLHPMRALFQ-IPRNPPPQLTKRFDCVLLCD 68
           +  Y+ + DIWSLG    E+A    P   D   + +L + I +   P L        L  
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269

Query: 69  FVNECLRKDLEERPFAKELLRHPLLKK 95
            VN C+  D E+RP    +        
Sbjct: 270 LVNMCINPDPEKRPDVTYVYDVAKRMH 296

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 71.9 bits (177), Expect = 1e-16
 Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 10/101 (9%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCV 64
           EQ     Y    D+++LG+   EL        +       F   R+        K+    
Sbjct: 191 EQISSQDYGKEVDLYALGLILAELLHVCDTAFE---TSKFFTDLRDGIISDIFDKK---- 243

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQELT 105
                + + L K  E+RP   E+LR   + K +   ++  T
Sbjct: 244 -EKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHT 283

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 70.9 bits (174), Expect = 4e-16
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 11/91 (12%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQI-----PRNPPPQLTKRFDCVLLC 67
              + D+WSLG     +  G  P   + + +  L  I         P    K  D     
Sbjct: 197 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK--DLQ--- 251

Query: 68  DFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
           D +  CL++D ++R    ELL HP ++    
Sbjct: 252 DVLKCCLKRDPKQRISIPELLAHPYVQIQTH 282

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 71.0 bits (174), Expect = 5e-16
 Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 11/95 (11%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNP-----PPQLTKRFDCVLLC 67
              + D+WSLG     +  G  P   + + +  L  I         P    K  D     
Sbjct: 244 ISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK--DLQ--- 298

Query: 68  DFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQ 102
           D +  CL++D ++R    ELL HP ++      +Q
Sbjct: 299 DVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 333

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 68.9 bits (169), Expect = 2e-15
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 19/97 (19%)

Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQI---------PRNPPPQLTKRF 61
                + D+WSLG     +  G  P   + + +  L  I         P  P   L    
Sbjct: 214 SKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--- 270

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
                 D +  CL++D ++R    ELL HP ++    
Sbjct: 271 ------DVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 69.0 bits (169), Expect = 3e-15
 Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 2/95 (2%)

Query: 6   CEQQLDMSYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC- 63
             +    +     DI+S G +    ++EG  P       +A   +       L       
Sbjct: 198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHED 257

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
           V+  + + + +  D ++RP AK +L+HP      +
Sbjct: 258 VIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 67.4 bits (165), Expect = 6e-15
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 3/90 (3%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLL 66
           EQ    SY  + DI+SLG+   EL    P  + +  +R L  +     P L  +      
Sbjct: 200 EQIHGNSYSHKVDIFSLGLILFELLY--PFSTQMERVRTLTDVRNLKFPPLFTQK-YPCE 256

Query: 67  CDFVNECLRKDLEERPFAKELLRHPLLKKG 96
              V + L     ERP A  ++ + + +  
Sbjct: 257 YVMVQDMLSPSPMERPEAINIIENAVFEDL 286

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 67.3 bits (165), Expect = 6e-15
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 3/92 (3%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ-IPRNPPPQLTKRFDCVLLCDF 69
            MSY+ + DIWSLG    EL    PP +     + L   I      ++  R+    L + 
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFS-QKELAGKIREGKFRRIPYRYS-DELNEI 247

Query: 70  VNECLRKDLEERPFAKELLRHPLLKKGAQLAH 101
           +   L      RP  +E+L +PL+ +     H
Sbjct: 248 ITRMLNLKDYHRPSVEEILENPLILEHHHHHH 279

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 63.7 bits (155), Expect = 1e-13
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCV 64
           EQ    +Y  + DI+SLG+   EL       S       +    RN   P   T+++   
Sbjct: 246 EQIHGNNYSHKVDIFSLGLILFELLY---SFSTQMERVRIITDVRNLKFPLLFTQKYPQ- 301

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                V + L     ERP A +++ + + + 
Sbjct: 302 -EHMMVQDMLSPSPTERPEATDIIENAIFEN 331

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 59.3 bits (143), Expect = 7e-12
 Identities = 16/96 (16%), Positives = 32/96 (33%), Gaps = 12/96 (12%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPP---LSDLHPMRALFQIPRNPPPQLTK 59
           ++   Q          D W+LG+    +   D P    + L     +F+  +N P     
Sbjct: 283 MLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQP--- 339

Query: 60  RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 +   +   LR   E+R    + +  P  ++
Sbjct: 340 ------VRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 56.6 bits (136), Expect = 5e-11
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 12/85 (14%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSD---LHPMRALFQIPRNPPPQLTKRFDCVLLCDFV 70
                D W+LG+    +   D P++    L     +F+  +N P           +   +
Sbjct: 290 MTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQP---------VRALL 340

Query: 71  NECLRKDLEERPFAKELLRHPLLKK 95
              LR   E+R    + +  P  ++
Sbjct: 341 EGFLRYPKEDRLLPLQAMETPEYEQ 365

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 52.4 bits (125), Expect = 2e-09
 Identities = 12/89 (13%), Positives = 24/89 (26%), Gaps = 7/89 (7%)

Query: 14  YDARCDIWSLGITAIELAEGDPP--LSDLHPMRALFQIPRNPPPQLTKRFDCVL-----L 66
           +    + W LG++   +     P  L       +  +     P   +  F         +
Sbjct: 270 FTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFV 329

Query: 67  CDFVNECLRKDLEERPFAKELLRHPLLKK 95
              +   L  D   R    E +  P   +
Sbjct: 330 KTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 51.7 bits (124), Expect = 3e-09
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 8/98 (8%)

Query: 7   EQQLDMSYDARCDIWSLG-ITAIELAEGDPPLSDLHP-----MRALFQIPRNPPPQLTKR 60
             Q         DI+S+G +    L++G  P  D +      +R +F +           
Sbjct: 209 NLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSL 268

Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
                  D +++ +  D  +RP A ++LRHPL    ++
Sbjct: 269 IA--EATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSK 304

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 51.1 bits (123), Expect = 4e-09
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 19/113 (16%)

Query: 3   VIACEQQLDMSYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRF 61
           V+    +    YD RCD+WSLG I  I L+ G PP          +      P      F
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLS-GYPPFVGRCGSDCGWDRGEACPACQNMLF 250

Query: 62  DCVLLC-----------------DFVNECLRKDLEERPFAKELLRHPLLKKGA 97
           + +                    D +++ L +D ++R  A ++L+HP ++  A
Sbjct: 251 ESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 50.9 bits (122), Expect = 5e-09
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 2/91 (2%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV--LLC 67
           L   YD +CD+WS+G+    L  G PP         L ++ +      +  +  V     
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK 269

Query: 68  DFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
           D + + L+ D + R  A++ L HP +K+   
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 50.0 bits (120), Expect = 9e-09
 Identities = 21/94 (22%), Positives = 30/94 (31%), Gaps = 15/94 (15%)

Query: 6   CEQQLDMSYDARCDIWSLGITAIELAEGDPP-----LSDLHPMRAL---FQIPRNPPPQL 57
              Q     D R D+WSLG     +  G+ P             A+     IP    P+ 
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP--QSPRH 272

Query: 58  TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHP 91
           +       L   +N  +  D  +RP    LL   
Sbjct: 273 SSA-----LWQLLNSMMTVDPHQRPHIPLLLSQL 301

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 16/93 (17%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPM-------RALFQIPRNPPPQLTKRFDCVL 65
            +D + D+WSLG+   E   G PP              R  F  P               
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR------- 235

Query: 66  LCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
             D ++  L+ +  +RP  +E+L HP +   + 
Sbjct: 236 --DLISRLLKHNPSQRPMLREVLEHPWITANSS 266

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.9 bits (117), Expect = 2e-08
 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC-- 67
           L  +YD +CD+WS G+    L  G PP +  +    L ++ +        ++  V     
Sbjct: 200 LHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAK 259

Query: 68  DFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
           D + + L      R  A++ L H  ++   +
Sbjct: 260 DLIRKMLTYVPSMRISARDALDHEWIQTYTK 290

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 48.5 bits (116), Expect = 4e-08
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 2/95 (2%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV--LLC 67
           L   Y+ +CD+WS G+    L  G PP    +    + ++ +         +  +     
Sbjct: 220 LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK 279

Query: 68  DFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQ 102
           + +   L  D  +R  A+E L    +KK A   ++
Sbjct: 280 ELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINK 314

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 48.1 bits (115), Expect = 5e-08
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC-- 67
           L  +YD +CD+WS G+    L  G PP    +    L ++          ++  +     
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254

Query: 68  DFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
           D + + L      R  A + L HP ++K + 
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 47.2 bits (113), Expect = 1e-07
 Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 16/92 (17%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPM-------RALFQIPRNPPPQLTKRFDCVLL 66
           +D + D+W  G+   E   G PP                  + P                
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSK-------- 240

Query: 67  CDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
            D +++ LR    +R   K ++ HP +K  ++
Sbjct: 241 -DLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 47.5 bits (113), Expect = 1e-07
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 12/93 (12%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHP-------MRALFQIPRNPPPQLTKRFDCVL 65
           SY  +CD WS G+    L  G  P   ++        +             L+      L
Sbjct: 252 SYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSP-----L 306

Query: 66  LCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
             D ++  L ++++ER  A   L+HP + + + 
Sbjct: 307 ARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 47.3 bits (113), Expect = 1e-07
 Identities = 21/113 (18%), Positives = 35/113 (30%), Gaps = 30/113 (26%)

Query: 10  LDMSYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC- 67
               YD  CD+WSLG I  I L  G PP    H +     +              + +  
Sbjct: 171 TGEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAISPGM-----------KTRIRMGQ 218

Query: 68  ----------------DFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
                             +   L+ +  +R    E + HP + +  ++    L
Sbjct: 219 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 271

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 47.1 bits (112), Expect = 1e-07
 Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 10/88 (11%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRAL---FQIPRNPPPQLTKRFDCVLLCDFV 70
              + DIW+LG     L     P  D   +R +   + IP +                 +
Sbjct: 230 IGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTV-------FHSLI 282

Query: 71  NECLRKDLEERPFAKELLRHPLLKKGAQ 98
              L+ + EER    E++        A+
Sbjct: 283 RAMLQVNPEERLSIAEVVHQLQEIAAAR 310

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 25/100 (25%), Positives = 37/100 (37%), Gaps = 18/100 (18%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALF--------QIPRNPPPQLTKRFDCVL 65
             A+ DIWSLGI    +     P S    +  LF        + P +    L    +   
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKS 288

Query: 66  LC----------DFVNECLRKDLEERPFAKELLRHPLLKK 95
            C          DF+   LRK+  ER  +++ L+H  L  
Sbjct: 289 TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 46.6 bits (111), Expect = 2e-07
 Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 30/110 (27%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC---- 67
            YD  CD+WSLG I  I L  G PP    H +     +              + +     
Sbjct: 239 KYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAISPGM-----------KTRIRMGQYEF 286

Query: 68  -------------DFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
                          +   L+ +  +R    E + HP + +  ++    L
Sbjct: 287 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 336

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 24/111 (21%), Positives = 34/111 (30%), Gaps = 31/111 (27%)

Query: 14  YDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKR--FDCVLLC--- 67
           YD  CD+WSLG I    L+ G  P          FQ         +       +      
Sbjct: 186 YDESCDLWSLGVILYTMLS-GQVP----------FQSHDRSLTCTSAVEIMKKIKKGDFS 234

Query: 68  --------------DFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
                         D +   L  D  +R     L  +  L+ G+QL+   L
Sbjct: 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPL 285

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 31/110 (28%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC---- 67
            YDA CDIWSLG +    L  G  P          F    +  P+  +    +       
Sbjct: 196 GYDAACDIWSLGVLLYTMLT-GYTP----------FANGPDDTPE--EILARIGSGKFSL 242

Query: 68  -------------DFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
                        D V++ L  D  +R  A  +LRHP +    QL   +L
Sbjct: 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 45.7 bits (109), Expect = 3e-07
 Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 5/90 (5%)

Query: 10  LDMSYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-LLC 67
                  +CDIWS G +    L  G  P +    +  + Q      P        +    
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLT-GCLPFTG-TSLEEVQQKATYKEPNYAVECRPLTPQA 255

Query: 68  -DFVNECLRKDLEERPFAKELLRHPLLKKG 96
            D + + L KD E RP A ++L H   K+ 
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 45.8 bits (109), Expect = 3e-07
 Identities = 22/110 (20%), Positives = 32/110 (29%), Gaps = 30/110 (27%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC---- 67
            YD  CD+WSLG I  I L  G PP            +              + L     
Sbjct: 205 KYDKSCDMWSLGVIMYILLC-GFPPFYSNTGQAISPGM-----------KRRIRLGQYGF 252

Query: 68  -------------DFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
                          +   L+ D  ER    + + HP + +   +    L
Sbjct: 253 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 44.5 bits (106), Expect = 8e-07
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 4/92 (4%)

Query: 10  LDMSYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLC- 67
           L  +YD +CD+WS G I  I L+ G PP    +    L ++          ++  +    
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253

Query: 68  -DFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
            D + + L      R  A + L HP ++K + 
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 44.6 bits (106), Expect = 8e-07
 Identities = 22/128 (17%), Positives = 33/128 (25%), Gaps = 42/128 (32%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDP--PLSDLHPMRALFQIPRNPPP-------QLTKR 60
           L++ +   CD+WS+G    E   G       +      + +    P P       +  K 
Sbjct: 212 LELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKY 271

Query: 61  FDC---------------------------------VLLCDFVNECLRKDLEERPFAKEL 87
           F                                   V L D +   L  D  +R    E 
Sbjct: 272 FYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331

Query: 88  LRHPLLKK 95
           L HP    
Sbjct: 332 LLHPFFAG 339

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 44.7 bits (106), Expect = 9e-07
 Identities = 25/133 (18%), Positives = 36/133 (27%), Gaps = 46/133 (34%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGD---PPLSDLHPMRALFQIPR------NPPPQLTKR 60
           L   +    DIWS      EL  GD    P       +    I +        P  L + 
Sbjct: 208 LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRN 267

Query: 61  -------FD------------------------------CVLLCDFVNECLRKDLEERPF 83
                  F+                                 + DF++  L+ D  +R  
Sbjct: 268 GKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327

Query: 84  AKELLRHPLLKKG 96
           A  L+ HP LK  
Sbjct: 328 AGGLVNHPWLKDT 340

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 20/106 (18%)

Query: 10  LDMSYDARCDIWSLG-ITAIELAEGDPPLSDLHP-------MRALFQIPRNPPPQLT--- 58
           L+  Y   CD WS G +  + L  G PP S               F  P      ++   
Sbjct: 180 LEGLYGPECDEWSAGVMMYVLLC-GYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQA 238

Query: 59  KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
           +          +   L K  ++R  + + L H   +K    + + L
Sbjct: 239 E--------SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 27/129 (20%), Positives = 39/129 (30%), Gaps = 44/129 (34%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDP--PLSDLHPMRALFQIPRNPPPQ----------- 56
           L++ +D   D+WS G    EL  G       +     A+ +    P P+           
Sbjct: 232 LNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNG 291

Query: 57  -------------------------------LTKRFDCVLLCDFVNECLRKDLEERPFAK 85
                                          L K     L CDF+   L+ D   RP   
Sbjct: 292 SKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA 351

Query: 86  ELLRHPLLK 94
           ELL+H  L+
Sbjct: 352 ELLKHKFLE 360

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALF-QIPRNPPPQLTKRFDCVLLC--D 68
           +Y    D+WS+G IT I L  G  P  D    + +F +I       ++  +D V L   D
Sbjct: 226 AYGPEVDMWSVGIITYILLC-GFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKD 284

Query: 69  FVNECLRKDLEERPFAKELLRHPLLKKGA 97
            V + +  D ++R    + L+HP +   A
Sbjct: 285 LVRKLIVLDPKKRLTTFQALQHPWVTGKA 313

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 20/116 (17%), Positives = 29/116 (25%), Gaps = 27/116 (23%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN-------------------- 52
            Y A  D+WS+G+T    A G  P       R   ++                       
Sbjct: 199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP 258

Query: 53  -------PPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAH 101
                  P      R   VLL   +   L  D E+     +             +H
Sbjct: 259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGNSH 314

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 43.9 bits (104), Expect = 2e-06
 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC-VLLCDFVNE 72
           +    D+++LG    EL   + P         ++Q+     P L+ +      + D +  
Sbjct: 220 FSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS-QIGMGKEISDILLF 278

Query: 73  CLRKDLEERPFAKELLRH--PLLKKGAQLAH 101
           C   + EERP   +L+     L K+  +L+H
Sbjct: 279 CWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 20/94 (21%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHP-------MRALFQIPRNPPPQLT---KRF 61
            Y    D+W+ G I    LA G PP             M   +Q         +   K  
Sbjct: 281 GYGKEVDLWACGVILFTLLA-GSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVK-- 337

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 D ++  L+ D E R  A++ L+HP  ++
Sbjct: 338 ------DLISRLLQVDPEARLTAEQALQHPFFER 365

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 18/86 (20%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ---------IPRNPPPQLTKRFDCV 64
            + + D++S G+   ELA    P  +L+P + +           IPRN  PQ+       
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA------ 269

Query: 65  LLCDFVNECLRKDLEERPFAKELLRH 90
                +  C   +  +RP    ++  
Sbjct: 270 ---AIIEGCWTNEPWKRPSFATIMDL 292

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 43.0 bits (101), Expect = 3e-06
 Identities = 29/131 (22%), Positives = 38/131 (29%), Gaps = 46/131 (35%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLS----------DLH-----------PMR- 44
           E  +   Y+   DIWS    A ELA GD              + H           P + 
Sbjct: 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 322

Query: 45  ---------------ALFQIPRNPPPQLTKRF---------DCVLLCDFVNECLRKDLEE 80
                           L  I +  P  L +           +     DF+   L    E+
Sbjct: 323 IVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEK 382

Query: 81  RPFAKELLRHP 91
           R  A E LRHP
Sbjct: 383 RATAAECLRHP 393

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 42.8 bits (101), Expect = 3e-06
 Identities = 9/73 (12%), Positives = 20/73 (27%), Gaps = 5/73 (6%)

Query: 15  DARCDIWSLGITAIELAEGDPPL---SDLHPMRALFQIPRNPPPQLTKRFDCV--LLCDF 69
           + + DI  +G +   L     PL        +    +     P +       +   +   
Sbjct: 180 NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAV 239

Query: 70  VNECLRKDLEERP 82
               ++ D   R 
Sbjct: 240 AARSVQGDGGIRS 252

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 42.8 bits (101), Expect = 4e-06
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALF-QIPRN----PPPQLTKRFDCVLL 66
            Y+   D WSLG I  I L+ G PP S+     +L  QI        P    +  +  L 
Sbjct: 320 GYNRAVDCWSLGVILFICLS-GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL- 377

Query: 67  CDFVNECLRKDLEERPFAKELLRHPLLKKGA 97
            D V + L  D + R   +E LRHP L+   
Sbjct: 378 -DLVKKLLVVDPKARFTTEEALRHPWLQDED 407

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 42.6 bits (101), Expect = 4e-06
 Identities = 26/107 (24%), Positives = 36/107 (33%), Gaps = 21/107 (19%)

Query: 3   VIACEQQLDM-SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQI-------PRNP 53
           +I C    +   Y    D+WS G I    LA G PP      M  L  I           
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQMLMLRMIMSGNYQFGSPE 252

Query: 54  PPQLT---KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA 97
               +   K        D V+  L    ++R  A+E L HP  ++  
Sbjct: 253 WDDYSDTVK--------DLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 42.5 bits (101), Expect = 5e-06
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 16/90 (17%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPM-------RALFQIPRNPPPQLTKRFDCVLL 66
           +    D+WSLG     L  G PP               A +++P     +          
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAK-------- 240

Query: 67  CDFVNECLRKDLEERPFAKELLRHPLLKKG 96
            D +++ LR++  +R     +L HP + + 
Sbjct: 241 -DLIHQLLRRNPADRLSLSSVLDHPFMSRN 269

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 25/128 (19%), Positives = 37/128 (28%), Gaps = 42/128 (32%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDP--PLSDLHPMRALFQIPRNPPP-------QLTKR 60
           L + +   CD+WS+G   IE   G    P  D     A+ +    P P       +  K 
Sbjct: 207 LALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKY 266

Query: 61  FDC---------------------------------VLLCDFVNECLRKDLEERPFAKEL 87
           F                                     L D + + L  D  +R   +E 
Sbjct: 267 FHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326

Query: 88  LRHPLLKK 95
           L+HP    
Sbjct: 327 LKHPFFDL 334

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 42.3 bits (100), Expect = 6e-06
 Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 6/88 (6%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRA-LFQIPRN--PPPQLTKRFDC-VLLCDF 69
           Y  + D+++ GI   EL  G  P S+++     +  + R    P     R +C   +   
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL 261

Query: 70  VNECLRKDLEERPFAKELLRH--PLLKK 95
           + ECL+K  +ERP    +L     L ++
Sbjct: 262 MAECLKKKRDERPSFPRILAEIEELARE 289

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 42.3 bits (99), Expect = 7e-06
 Identities = 10/89 (11%), Positives = 24/89 (26%), Gaps = 6/89 (6%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
              E   +  ++ + D + +  T   +  G              +          +    
Sbjct: 252 QCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGL------FRRLPHL 305

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRHPL 92
            +  +F +  L         + +LLR  L
Sbjct: 306 DMWNEFFHVMLNIPDCHHLPSLDLLRQKL 334

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 19/90 (21%), Positives = 29/90 (32%), Gaps = 16/90 (17%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPM-------RALFQIPRNPPPQLTKRFDCVLL 66
           +    D+WS+G     L  G PP              +  + IP++  P           
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA-------- 243

Query: 67  CDFVNECLRKDLEERPFAKELLRHPLLKKG 96
              + + L+ D   RP   ELL       G
Sbjct: 244 -SLIQKMLQTDPTARPTINELLNDEFFTSG 272

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 14/97 (14%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV-- 64
            Y    D WS+G IT I L  G PP  +    +   +I         P      +D +  
Sbjct: 183 PYSKAVDCWSIGVITYILLC-GYPPFYEETESKLFEKIKEGYYEFESPF-----WDDISE 236

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAH 101
              DF+   L KD  ER   ++ L HP +     L  
Sbjct: 237 SAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHR 273

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 41.8 bits (99), Expect = 8e-06
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 20/99 (20%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQI-------PRNPPPQLT---KRF 61
            Y    DIW+ G I  I L  G PP  D    R   QI       P      +T   K  
Sbjct: 183 PYSKPVDIWACGVILYILLV-GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK-- 239

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA 100
                   ++  L  + ++R  A + L+ P +    ++A
Sbjct: 240 ------SLIDSMLTVNPKKRITADQALKVPWICNRERVA 272

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 19/90 (21%), Positives = 29/90 (32%), Gaps = 16/90 (17%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPM-------RALFQIPRNPPPQLTKRFDCVLL 66
           +    D+WS+G     L  G PP              +  + IP++  P           
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA-------- 269

Query: 67  CDFVNECLRKDLEERPFAKELLRHPLLKKG 96
              + + L+ D   RP   ELL       G
Sbjct: 270 -SLIQKMLQTDPTARPTINELLNDEFFTSG 298

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 41.1 bits (97), Expect = 1e-05
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 20/99 (20%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQI-------PRNPPPQLT---KRF 61
            Y    DIW+ G I  I L  G PP  D    R   QI       P      +T   K  
Sbjct: 206 PYSKPVDIWACGVILYILLV-GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK-- 262

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA 100
                   ++  L  + ++R  A + L+ P +    ++A
Sbjct: 263 ------SLIDSMLTVNPKKRITADQALKVPWICNRERVA 295

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 16/114 (14%), Positives = 23/114 (20%), Gaps = 22/114 (19%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN-------------------- 52
            Y    D WS G  A E   G  P              R                     
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSS 258

Query: 53  --PPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
             P P          L  ++   L     +R    +       +    +   +L
Sbjct: 259 VLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKL 312

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 19/102 (18%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHP------MRALFQIPRNPPPQLT---KRFD 62
            Y    D+W  G I  I L+ G  P            ++  +++       ++   K   
Sbjct: 209 PYGKPVDVWGCGVILFILLS-GCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAK--- 264

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
                D V   L  D  ER    E L HP LK+  + A++  
Sbjct: 265 -----DLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIH 301

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 18/87 (20%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ---------IPRNPPPQLTKRFDC 63
            +    D+WS G+   EL  G+ P   +  +   +          IP   P    K    
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAK---- 245

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRH 90
                 + +C   D   RP    +L  
Sbjct: 246 -----LMEDCWNPDPHSRPSFTNILDQ 267

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 4/87 (4%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVL- 65
           EQ    + D   DI+S+GI   E+  G+PP +    +    +  ++  P +T      + 
Sbjct: 182 EQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP 241

Query: 66  --LCDFVNECLRKDLEERPF-AKELLR 89
             L + +     KD   R    +E+  
Sbjct: 242 QSLSNVILRATEKDKANRYKTIQEMKD 268

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 18/87 (20%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ---------IPRNPPPQLTKRFDC 63
           +     D+WS  +   EL   + P +DL  M    +         IP    P        
Sbjct: 187 TNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPH------- 239

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRH 90
             +   +  C+ +D  +RP    ++  
Sbjct: 240 --VSKLMKICMNEDPAKRPKFDMIVPI 264

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 20/99 (20%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQI-------PRNPPPQLT---KRF 61
            Y    D+W+ G I  I L  G PP  D    R   QI       P      +T   K  
Sbjct: 189 PYGKPVDLWACGVILYILLV-GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK-- 245

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA 100
                 D +N+ L  +  +R  A E L+HP +   + +A
Sbjct: 246 ------DLINKMLTINPSKRITAAEALKHPWISHRSTVA 278

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 4/92 (4%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV--LLCDF 69
                 D+WS+G ++ I L+ G  P    +    L  +           F  +     DF
Sbjct: 332 PVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 390

Query: 70  VNECLRKDLEERPFAKELLRHPLLKKGAQLAH 101
           + + L  D   R    + L HP L  G     
Sbjct: 391 IRKLLLADPNTRMTIHQALEHPWLTPGNAPGR 422

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 14/100 (14%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV-- 64
                 D+W++G +  + L+ G  P +    +  L  + R     +        F  V  
Sbjct: 226 PVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLETLQNVKRCDWEFDEDA-----FSSVSP 279

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
              DF+   L+K+  +R    + L HP LK         +
Sbjct: 280 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRI 319

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 23/99 (23%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALF-----------QIPR 51
            I  E++    Y  + D +S  +    +  G+ P  +    +  F            IP 
Sbjct: 197 TIGAEEES---YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPE 253

Query: 52  NPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRH 90
           + PP+L            +  C   D ++RP    +++ 
Sbjct: 254 DCPPRLRN---------VIELCWSGDPKKRPHFSYIVKE 283

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALF-QIPRN----PPPQLTKRFDCVLL 66
            Y+   D WSLG I  I L+ G PP S+     +L  QI        P    +  +  L 
Sbjct: 195 GYNRAVDCWSLGVILFICLS-GYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL- 252

Query: 67  CDFVNECLRKDLEERPFAKELLRHP 91
            D V + L  D + R   +E LRHP
Sbjct: 253 -DLVKKLLVVDPKARFTTEEALRHP 276

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 11/85 (12%)

Query: 14  YDAR-CDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTKRFDCVLLCDFVN 71
           Y  R   +WSLGI   ++  GD P       +R      +          +C      + 
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS------EC---QHLIR 275

Query: 72  ECLRKDLEERPFAKELLRHPLLKKG 96
            CL     +RP  +E+  HP ++  
Sbjct: 276 WCLALRPSDRPTFEEIQNHPWMQDV 300

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 39.2 bits (92), Expect = 6e-05
 Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV-- 64
                 D+WS+G IT I L+ G  P         L  I       +        F     
Sbjct: 194 PLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANITSVSYDFDEEF-----FSHTSE 247

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
           L  DF+ + L K+  +R   +E LRHP +     
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWITPVDN 281

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 39.3 bits (92), Expect = 7e-05
 Identities = 24/96 (25%), Positives = 34/96 (35%), Gaps = 14/96 (14%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV-- 64
                 D+WS+G IT I L+ G  P         L  I       +        F     
Sbjct: 194 PLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANITAVSYDFDEEF-----FSQTSE 247

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA 100
           L  DF+ + L K+  +R   +E LRHP +       
Sbjct: 248 LAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQ 283

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 38.9 bits (91), Expect = 8e-05
 Identities = 20/80 (25%), Positives = 25/80 (31%), Gaps = 19/80 (23%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALF----------QIPRNPPPQLTKRFD 62
           SYD + D++S GI   E+        D  P    F            P N PP       
Sbjct: 198 SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFP--- 254

Query: 63  CVLLCDFVNECLRKDLEERP 82
                     C   D E+RP
Sbjct: 255 ------ITVRCCDLDPEKRP 268

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 14/92 (15%)

Query: 14  YDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV--L 65
                D+W++G I  + L     P            I +     +        F  V  L
Sbjct: 210 ITTATDMWNIGIIAYMLLT-HTSPFVGEDNQETYLNISQVNVDYSEET-----FSSVSQL 263

Query: 66  LCDFVNECLRKDLEERPFAKELLRHPLLKKGA 97
             DF+   L K+ E+RP A+  L H  L++  
Sbjct: 264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD 295

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 10/68 (14%), Positives = 21/68 (30%), Gaps = 8/68 (11%)

Query: 15  DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECL 74
               DI+++G T   L    P  +  +          +P  +    +  +L        +
Sbjct: 254 TVATDIYTVGRTLAALTLDLPTRNGRYVDGL---PEDDPVLKTYDSYGRLLRR-----AI 305

Query: 75  RKDLEERP 82
             D  +R 
Sbjct: 306 DPDPRQRF 313

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 14/96 (14%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV-- 64
                 D+WS+G IT I L+ G  P         L  +                F     
Sbjct: 193 PLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANVSAVNYEFEDEY-----FSNTSA 246

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA 100
           L  DF+   L KD ++R   ++ L+HP +K      
Sbjct: 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 38.3 bits (89), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI 49
            Y A  D+WS+G+T    A G  P       R   ++
Sbjct: 199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 11/87 (12%)

Query: 14  YDAR-CDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTKRFDCVLLCDFVN 71
           Y A    +WSLGI   ++  GD P       + A    P +  P      DC   C  + 
Sbjct: 215 YHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSP------DC---CALIR 265

Query: 72  ECLRKDLEERPFAKELLRHPLLKKGAQ 98
            CL      RP  +E+L  P ++  A+
Sbjct: 266 RCLAPKPSSRPSLEEILLDPWMQTPAE 292

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 37.8 bits (88), Expect = 2e-04
 Identities = 30/144 (20%), Positives = 37/144 (25%), Gaps = 57/144 (39%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDP--PLSDLHPMRALFQIPRNPPP-------QLTKR 60
           L   Y    D+WSLG    EL  G P  P  D     A        P        +  K 
Sbjct: 272 LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKN 331

Query: 61  F------------------------------------------------DCVLLCDFVNE 72
           F                                                D  L  DF+ +
Sbjct: 332 FVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQ 391

Query: 73  CLRKDLEERPFAKELLRHPLLKKG 96
           CL  D   R    + LRHP L++ 
Sbjct: 392 CLEWDPAVRMTPGQALRHPWLRRR 415

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV-- 64
           EQ    S DAR D++SLG    E+  G+PP +   P+   +Q  R  P   + R + +  
Sbjct: 189 EQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSA 248

Query: 65  LLCDFVNECLRKDLEERPF-AKELLR 89
            L   V + L K+ E R   A E+  
Sbjct: 249 DLDAVVLKALAKNPENRYQTAAEMRA 274

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 12/90 (13%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP------PQLTKR 60
           E+  +     R DI++L     E   G PP            I +  P      P +   
Sbjct: 205 ERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVA 264

Query: 61  FDCVLLCDFVNECLRKDLEERPF-AKELLR 89
           FD V+        + K+ E+R     +L  
Sbjct: 265 FDAVIA-----RGMAKNPEDRYVTCGDLSA 289

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 14/90 (15%)

Query: 14  YDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV--L 65
                D+WS+G I  + L+ G  P    +    L  I                F  +   
Sbjct: 265 VSFPTDMWSVGVIAYMLLS-GLSPFLGDNDAETLNNILACRWDLEDEE-----FQDISEE 318

Query: 66  LCDFVNECLRKDLEERPFAKELLRHPLLKK 95
             +F+++ L K+   R  A E L+HP L  
Sbjct: 319 AKEFISKLLIKEKSWRISASEALKHPWLSD 348

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 14/94 (14%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV-- 64
                 D+WSLG +  + L+ G  P       + +  I       +        F  +  
Sbjct: 179 VVSTATDMWSLGTLVYVLLS-GINPFLAETNQQIIENIMNAEYTFDEEA-----FKEISI 232

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
              DFV+  L K+ + R  A E L+HP LK+  +
Sbjct: 233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQKIE 266

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 37.0 bits (86), Expect = 5e-04
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 10  LDMSYDARCDIWSLGITAIELAEGDP--PLSDLHPMRALFQIPRNPPPQ 56
           L M YD   D+WSLG   +E+  G+P    ++              PP 
Sbjct: 231 LGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPA 279

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 12/95 (12%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPP--LSDLHPMRALFQ-IPRNP---PPQLTKR 60
             +    Y    D WSLG+TA EL  G  P  +      + +           P   ++ 
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQ- 245

Query: 61  FDCVLLCDFVNECLRKDLEER-PFAKELLRHPLLK 94
            + V     + + L  + ++R     ++   P + 
Sbjct: 246 -EMV---SLLKKLLEPNPDQRFSQLSDVQNFPYMN 276

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 23/94 (24%), Positives = 32/94 (34%), Gaps = 14/94 (14%)

Query: 13  SYDARCDIWSLG-ITAIELAEGDPPLSDLHPMRALFQIPR-----NPPPQLTKRFDCV-- 64
                 D+WS+G IT I L+ G  P         L  I       +        F     
Sbjct: 187 PLGLEADMWSIGVITYILLS-GASPFLGETKQETLTNISAVNYDFDEEY-----FSNTSE 240

Query: 65  LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ 98
           L  DF+   L KD + R    + L H  +K   +
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	108
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.95
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.95
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.95
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.95
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.95
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.93
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.92
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.92
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.92
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.91
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.91
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.91
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.91
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.9
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.9
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.9
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.9
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.9
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.89
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.89
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.89
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.89
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.89
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.89
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.89
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.89
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.89
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.89
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.89
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.88
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.88
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.88
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.88
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.88
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.88
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.88
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.88
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.88
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.88
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.88
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.88
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.88
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.88
3niz_A	311	Rhodanese family protein; structural genomics, str	99.88
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.88
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.88
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.88
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.88
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.88
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.88
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.88
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.88
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.88
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.88
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.88
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.88
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.88
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.87
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.87
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.87
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.87
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.87
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.87
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.87
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.87
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.87
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.87
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.87
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.87
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.87
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.87
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.87
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.87
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.87
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.87
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.87
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.87
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.87
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.87
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.87
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.87
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.87
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.86
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.86
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.86
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.86
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.86
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.86
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.86
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.86
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.86
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.86
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.86
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.86
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.86
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.86
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.86
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.86
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.86
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.86
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.86
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.86
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.86
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.86
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.86
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.86
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.86
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.86
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.86
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.86
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.86
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.86
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.85
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.85
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.85
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.85
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.85
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.85
3bhy_A	283	Death-associated protein kinase 3; death associate	99.85
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.85
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.85
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.85
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.85
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.85
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.85
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.85
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.84
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.84
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.84
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.84
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.84
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.84
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.84
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.84
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.84
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.84
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.84
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.84
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.83
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.83
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.83
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.83
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.83
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.83
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.82
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.82
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.82
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.82
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.82
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.81
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.81
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.81
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.81
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.8
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.8
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.8
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.8
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.8
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.8
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.79
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.79
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.79
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.79
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.79
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.79
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.79
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.78
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.78
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.78
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.78
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.78
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.78
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.78
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.78
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.78
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.78
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.78
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.78
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.78
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.78
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.78
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.78
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.78
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.78
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.78
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.78
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.77
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.77
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.77
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.77
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.77
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.77
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.77
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.77
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.77
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.76
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.76
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.76
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.76
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.76
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.76
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.76
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.76
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.75
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.75
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.75
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.75
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.75
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.75
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.75
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.75
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.74
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.74
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.74
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.74
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.74
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.73
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.73
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.73
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.73
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.73
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.72
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.72
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.71
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.71
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.71
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.71
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.7
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.69
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.69
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.69
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.68
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.67
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.67
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.67
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.67
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.66
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.65
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.65
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.65
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.61
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.59
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.53
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.5
3uqc_A	286	Probable conserved transmembrane protein; structur	99.47
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.39
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	93.53
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	92.62
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	90.52

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=1.2e-28  Score=149.12  Aligned_cols=98  Identities=36%  Similarity=0.568  Sum_probs=83.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||||++.+..|+.++||||+|+++|+|++|..||.+.+..+.+..+.....+... ....+.++++|+.+||..||+
T Consensus       234 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~  313 (346)
T 4fih_A          234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA  313 (346)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTT
T ss_pred             cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChh
Confidence            4799999999999999999999999999999999999998887777666554433222 223578899999999999999


Q ss_pred             CCCCHHHHhcCcccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~   98 (108)
                      +|+++.|+++||||+...+
T Consensus       314 ~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          314 QRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             TSCCHHHHTTCGGGGGCCC
T ss_pred             HCcCHHHHhcCHhhcCCCC
Confidence            9999999999999987643

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.95  E-value=3.1e-28  Score=144.55  Aligned_cols=95  Identities=20%  Similarity=0.406  Sum_probs=75.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      |.|||||++.+ .|+.++||||+|+++|+|++|..||.+... ......+..+..+.......++++++|+.+||..||+
T Consensus       194 p~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  272 (290)
T 3fpq_A          194 PEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             CCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             ccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChh
Confidence            57999999865 699999999999999999999999987544 3444445444433323334577899999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +|||+.|+++||||++.
T Consensus       273 ~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          273 ERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             GSCCHHHHHTSGGGC--
T ss_pred             HCcCHHHHhcCccccCC
Confidence            99999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.95  E-value=1.6e-28  Score=148.70  Aligned_cols=95  Identities=18%  Similarity=0.281  Sum_probs=84.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|||||++.+..|+.++||||+|+++|+|++|..||.+.+..+.+.++..+..+... ...+.++.+|+.+||..||++
T Consensus       189 ~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~-~~~s~~~~~li~~~L~~dP~~  267 (350)
T 4b9d_A          189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS-LHYSYDLRSLVSQLFKRNPRD  267 (350)
T ss_dssp             CTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCC-TTSCHHHHHHHHHHTCSSGGG
T ss_pred             ccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCC-ccCCHHHHHHHHHHccCChhH
Confidence            5799999999999999999999999999999999999999888888777766554433 245788999999999999999


Q ss_pred             CCCHHHHhcCcccccc
Q psy2811          81 RPFAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~   96 (108)
                      ||++.|+++||||+..
T Consensus       268 R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          268 RPSVNSILEKGFIAKR  283 (350)
T ss_dssp             SCCHHHHHTSHHHHTT
T ss_pred             CcCHHHHhcCHHhhcC
Confidence            9999999999999754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.95  E-value=6.9e-28  Score=148.86  Aligned_cols=98  Identities=36%  Similarity=0.568  Sum_probs=83.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||||++.+..|+.++||||+|+++|+|++|..||.+.+..+.+..+.....+... ....+.++++|+.+||..||+
T Consensus       311 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~  390 (423)
T 4fie_A          311 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA  390 (423)
T ss_dssp             TTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTT
T ss_pred             cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChh
Confidence            5799999999999999999999999999999999999998887777666554433222 224578999999999999999


Q ss_pred             CCCCHHHHhcCcccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~   98 (108)
                      +|+++.|+++||||+....
T Consensus       391 ~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          391 QRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             TSCCHHHHTTCGGGGGCCC
T ss_pred             HCcCHHHHhcCHHhcCCCC
Confidence            9999999999999987643

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.95  E-value=3.5e-28  Score=145.07  Aligned_cols=94  Identities=16%  Similarity=0.202  Sum_probs=83.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|||||++.+..|+.++|+||+|+++|+|++|..||.+.+..+...++.......+.  ..+.++.+|+.+||..||++
T Consensus       190 ~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~  267 (304)
T 3ubd_A          190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ--FLSPEAQSLLRMLFKRNPAN  267 (304)
T ss_dssp             GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGG
T ss_pred             cccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCC--cCCHHHHHHHHHHcccCHHH
Confidence            5799999999999999999999999999999999999998888877777666554332  56789999999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     ++|+++||||++.
T Consensus       268 R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          268 RLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             STTCSTTTHHHHHTSGGGTTC
T ss_pred             CCCCCcCCHHHHHcCccccCC
Confidence            998     5899999999875

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.95  E-value=3.8e-28  Score=143.22  Aligned_cols=94  Identities=16%  Similarity=0.122  Sum_probs=81.2

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..| +.++||||+|+++|+|++|..||.+.+......++..+....+.  ..+.++++|+.+||..||+
T Consensus       175 ~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~  252 (275)
T 3hyh_A          175 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK--FLSPGAAGLIKRMLIVNPL  252 (275)
T ss_dssp             CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSSGG
T ss_pred             cccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHccCChh
Confidence            57999999998887 46899999999999999999999998877777776666544332  4678899999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +|+|+.|+++||||+..
T Consensus       253 ~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          253 NRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             GSCCHHHHHHCHHHHTT
T ss_pred             HCcCHHHHHcCcccccC
Confidence            99999999999999754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.95  E-value=4.2e-28  Score=144.96  Aligned_cols=94  Identities=21%  Similarity=0.190  Sum_probs=82.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      |.|||||++.+..|+.++|+||+|+++|+|++|..||.+.+..+.+.++.......+.  ..+.++++|+.+||..||++
T Consensus       198 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~--~~s~~~~dli~~lL~~dp~~  275 (311)
T 4aw0_A          198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE--KFFPKARDLVEKLLVLDATK  275 (311)
T ss_dssp             GGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT--TCCHHHHHHHHHHSCSSGGG
T ss_pred             cccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--ccCHHHHHHHHHHccCCHhH
Confidence            5799999999999999999999999999999999999998888887777776654432  46788999999999999999


Q ss_pred             CCCHHH------HhcCcccccc
Q psy2811          81 RPFAKE------LLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~------~l~~~~~~~~   96 (108)
                      |+++.|      +++||||++.
T Consensus       276 R~t~~e~~~~~~i~~Hp~F~~i  297 (311)
T 4aw0_A          276 RLGCEEMEGYGPLKAHPFFESV  297 (311)
T ss_dssp             STTSGGGTCHHHHHTSGGGTTC
T ss_pred             CcChHHHcCCHHHHCCCCcCCC
Confidence            999887      5899999875

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.93  E-value=2.2e-26  Score=138.81  Aligned_cols=96  Identities=26%  Similarity=0.324  Sum_probs=78.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||||++.+..|+.++||||+|+++|+|++|..||.+.+......++.....+.. .+...+..+.+++.+||..||.
T Consensus       220 ~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~  299 (336)
T 4g3f_A          220 ETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPV  299 (336)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGG
T ss_pred             ccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHh
Confidence            469999999999999999999999999999999999988765555555555543321 1224578899999999999999


Q ss_pred             CCCCHHHH-------------hcCcccccc
Q psy2811          80 ERPFAKEL-------------LRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~-------------l~~~~~~~~   96 (108)
                      +|||+.|+             ++|||+...
T Consensus       300 ~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          300 HRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             GSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             HCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            99999997             578998754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.92  E-value=6.7e-26  Score=144.76  Aligned_cols=96  Identities=21%  Similarity=0.174  Sum_probs=83.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..|+.++|+||+|+++|+|++|..||.+.+..+.+.++..........  ...+.++++|+++||..||
T Consensus       320 ~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp  399 (573)
T 3uto_A          320 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADP  399 (573)
T ss_dssp             GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSG
T ss_pred             ccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCCh
Confidence            47999999999999999999999999999999999999998888777776654433221  2357889999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+|+++.|+++||||+..
T Consensus       400 ~~R~t~~e~l~Hpw~~~~  417 (573)
T 3uto_A          400 NTRMTIHQALEHPWLTPG  417 (573)
T ss_dssp             GGSCCHHHHHHSTTTSCC
T ss_pred             hHCcCHHHHhcCcCcCCC
Confidence            999999999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.92  E-value=1.7e-25  Score=137.79  Aligned_cols=96  Identities=22%  Similarity=0.153  Sum_probs=75.4

Q ss_pred             CccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC-----------------------C
Q psy2811           1 MSVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP-----------------------Q   56 (108)
Q Consensus         1 ~~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------------------~   56 (108)
                      +.|+|||++.+.. ++.++||||+|+++|+|++|.+||.+.+..+.+..+......                       .
T Consensus       226 ~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~  305 (398)
T 4b99_A          226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPR  305 (398)
T ss_dssp             CTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCC
T ss_pred             hHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCc
Confidence            4799999988754 688999999999999999999999998876655544221000                       0


Q ss_pred             CC------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 LT------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ~~------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ..      ....+.++.+|+.+||..||++|+|+.|+++||||+..
T Consensus       306 ~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          306 QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             CCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             CCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence            00      01236788899999999999999999999999999864

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.92  E-value=3.1e-25  Score=135.20  Aligned_cols=96  Identities=24%  Similarity=0.225  Sum_probs=70.8

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhccC---------------------------
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPR---------------------------   51 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~~~---------------------------   51 (108)
                      +.|+|||++.+. .|+.++|+||+|+++|+|++|..||... +..+.+.++..                           
T Consensus       210 ~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~  289 (361)
T 4f9c_A          210 PGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQ  289 (361)
T ss_dssp             GGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCC
T ss_pred             ccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcch
Confidence            469999999875 5888999999999999999999998543 33333222110                           


Q ss_pred             -----------CC--CC------------CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          52 -----------NP--PP------------QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        52 -----------~~--~~------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                 ..  .+            .......+.++.+|+++||..||++|+|++|+++||||++.
T Consensus       290 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          290 DLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             CHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             hhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence                       00  00            00011236788999999999999999999999999999875

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.91  E-value=1.8e-25  Score=133.31  Aligned_cols=94  Identities=20%  Similarity=0.279  Sum_probs=78.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||||++.+..|+.++||||+|+++|++++ |..||.+.+..+....+..+.....+ ...+.++.+++.+||+.||+
T Consensus       194 ~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~~~~li~~cl~~dP~  272 (299)
T 4asz_A          194 IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRP-RTCPQEVYELMLGCWQREPH  272 (299)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGG
T ss_pred             hhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCC-ccchHHHHHHHHHHcCCChh
Confidence            36999999999999999999999999999998 89999998887777776665543333 35678899999999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +||++.+++  .+++...
T Consensus       273 ~RPs~~~i~--~~L~~~~  288 (299)
T 4asz_A          273 MRKNIKGIH--TLLQNLA  288 (299)
T ss_dssp             GSCCHHHHH--HHHHHHH
T ss_pred             HCcCHHHHH--HHHHHHH
Confidence            999999995  5665543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.91  E-value=1.1e-24  Score=130.41  Aligned_cols=89  Identities=18%  Similarity=0.210  Sum_probs=76.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||||++.+..|+.++||||||+++|++++ |..||.+.+..+....+..+.....+ ...+..+.+++..||..||+
T Consensus       211 ~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~~~~li~~C~~~dP~  289 (308)
T 4gt4_A          211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCP-DDCPAWVYALMIECWNEFPS  289 (308)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGG
T ss_pred             CcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCc-ccchHHHHHHHHHHcCCChh
Confidence            36999999999999999999999999999998 89999998887777776655443333 35678899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.+|+++
T Consensus       290 ~RPs~~ei~~~  300 (308)
T 4gt4_A          290 RRPRFKDIHSR  300 (308)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999753

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.91  E-value=2.2e-24  Score=130.06  Aligned_cols=89  Identities=18%  Similarity=0.297  Sum_probs=75.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||||++.+..|+.++||||+|+++|++++ |..||.+.+..+....+..+.....+ ...+.++.+++.+||..||+
T Consensus       224 ~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p-~~~~~~~~~li~~cl~~dP~  302 (329)
T 4aoj_A          224 IRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP-RACPPEVYAIMRGCWQREPQ  302 (329)
T ss_dssp             GGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCC-TTCCHHHHHHHHHHCCSSTT
T ss_pred             ccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCc-ccccHHHHHHHHHHcCcChh
Confidence            36999999999999999999999999999998 89999998877777666555433322 35678899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.+|+++
T Consensus       303 ~RPs~~ei~~~  313 (329)
T 4aoj_A          303 QRHSIKDVHAR  313 (329)
T ss_dssp             TSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999853

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.91  E-value=5e-25  Score=133.87  Aligned_cols=89  Identities=19%  Similarity=0.383  Sum_probs=71.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-hhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRAL-FQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|||||++.+..|+.++||||+|+++|++++ |..||.+.+....+ ..+..+. ....+...+.++.+++..||+.||
T Consensus       251 ~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~c~~~dP  329 (353)
T 4ase_A          251 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAPDYTTPEMYQTMLDCWHGEP  329 (353)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred             ccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCcCh
Confidence            36999999999999999999999999999998 89999886543333 3333332 222233567899999999999999


Q ss_pred             CCCCCHHHHhcC
Q psy2811          79 EERPFAKELLRH   90 (108)
Q Consensus        79 ~~R~~~~~~l~~   90 (108)
                      ++|||+.+|++|
T Consensus       330 ~~RPt~~eil~~  341 (353)
T 4ase_A          330 SQRPTFSELVEH  341 (353)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999987

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.90  E-value=7.3e-24  Score=126.15  Aligned_cols=100  Identities=40%  Similarity=0.621  Sum_probs=81.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCC-CCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPP-PQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+.......+..... ....+...+..+.+++.+||..||.
T Consensus       180 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  259 (297)
T 3fxz_A          180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVE  259 (297)
T ss_dssp             GGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTT
T ss_pred             cCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChh
Confidence            369999999999999999999999999999999999988876655444332222 2222234577899999999999999


Q ss_pred             CCCCHHHHhcCcccccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      +||++.++++|+||+...+..
T Consensus       260 ~Rps~~ell~h~~~~~~~~~~  280 (297)
T 3fxz_A          260 KRGSAKELLQHQFLKIAKPLS  280 (297)
T ss_dssp             TSCCHHHHTTCGGGGGCCCGG
T ss_pred             HCcCHHHHhhChhhcccCccc
Confidence            999999999999999776544

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.90  E-value=1e-23  Score=128.54  Aligned_cols=96  Identities=23%  Similarity=0.262  Sum_probs=81.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+..+....+..........  ...+..+++|+.+||..||
T Consensus       182 ~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  261 (361)
T 2yab_A          182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKET  261 (361)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSST
T ss_pred             ccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCCh
Confidence            46999999999899999999999999999999999999988777776665554433211  2347789999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+||++.++++||||+..
T Consensus       262 ~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          262 RKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             TTSCCHHHHHTSTTTSCS
T ss_pred             hHCcCHHHHhcCcCcCCC
Confidence            999999999999999854

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.90  E-value=1e-24  Score=130.09  Aligned_cols=93  Identities=25%  Similarity=0.281  Sum_probs=69.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|||||++.+..|+.++||||+|+++|+|++   ||.+... ...+..+.....+... ...++...+|+++||..||+
T Consensus       194 ~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~li~~~L~~dP~  269 (299)
T 4g31_A          194 KLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLF-TQKYPCEYVMVQDMLSPSPM  269 (299)
T ss_dssp             CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHH-HHHCHHHHHHHHHHTCSSGG
T ss_pred             ccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCC-cccCHHHHHHHHHHcCCChh
Confidence            46999999999999999999999999999996   6654322 2233333333222111 12345677899999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +||++.|+++|+||++..
T Consensus       270 ~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          270 ERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             GSCCHHHHHTSGGGCCC-
T ss_pred             HCcCHHHHhcCHhhCCCC
Confidence            999999999999998753

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.90  E-value=1.5e-23  Score=126.46  Aligned_cols=94  Identities=17%  Similarity=0.225  Sum_probs=80.1

Q ss_pred             CccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYD-ARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~-~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..+. .++|+||+|++++++++|..||.+.+......++..+....+.  ..+..+.+++++||..||.
T Consensus       177 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~  254 (328)
T 3fe3_A          177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMSTDCENLLKRFLVLNPI  254 (328)
T ss_dssp             GGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHCCSSTT
T ss_pred             cceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHCCCChh
Confidence            369999999988875 6899999999999999999999998877766666555443322  4678899999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +||++.++++||||+..
T Consensus       255 ~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          255 KRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             TSCCHHHHTTCTTTTTT
T ss_pred             HCcCHHHHhcCHhhcCC
Confidence            99999999999999764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.90  E-value=4.2e-23  Score=124.92  Aligned_cols=94  Identities=22%  Similarity=0.204  Sum_probs=80.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||.+.+.......+.......+.  ..+.++.+++.+||..||++
T Consensus       169 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~  246 (337)
T 1o6l_A          169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGLLKKDPKQ  246 (337)
T ss_dssp             GGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTT
T ss_pred             hhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHH
Confidence            4699999999999999999999999999999999999988776666665554433322  45788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.++++|+||++.
T Consensus       247 R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          247 RLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             STTCSTTTHHHHHTSGGGTTC
T ss_pred             hcCCCCCCHHHHHcCCCcCCC
Confidence            99     89999999999764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.89  E-value=1.7e-23  Score=130.47  Aligned_cols=96  Identities=23%  Similarity=0.258  Sum_probs=81.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|..||.+.+.......+..+.......  ...+.++.+++.+||..||
T Consensus       177 ~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  256 (444)
T 3soa_A          177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINP  256 (444)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSST
T ss_pred             cccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCCh
Confidence            46999999999899999999999999999999999999888777666665554333222  2457889999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+||++.++++||||+..
T Consensus       257 ~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          257 SKRITAAEALKHPWISHR  274 (444)
T ss_dssp             TTSCCHHHHHHSCTTHHH
T ss_pred             hHCCCHHHHhcCccccCC
Confidence            999999999999999754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.89  E-value=1.6e-23  Score=135.11  Aligned_cols=94  Identities=19%  Similarity=0.197  Sum_probs=75.5

Q ss_pred             Cccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQL-DMSYDARCDIWSLGITAIELAEGDPPLSDLH---PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~-~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      |.|||||++. +..|+.++|+||+|+++|+|++|..||.+.+   .......+.......+  ...+.++++|+.+||..
T Consensus       354 p~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p--~~~S~~a~dLI~~lL~~  431 (689)
T 3v5w_A          354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP--DSFSPELRSLLEGLLQR  431 (689)
T ss_dssp             GGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCS
T ss_pred             cCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC--ccCCHHHHHHHHHHccC
Confidence            5799999996 4679999999999999999999999997642   2333344444433332  24678999999999999


Q ss_pred             CCCCCCC-----HHHHhcCcccccc
Q psy2811          77 DLEERPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        77 ~p~~R~~-----~~~~l~~~~~~~~   96 (108)
                      ||.+|++     +.++++||||++.
T Consensus       432 dP~~Rl~~~~~ga~ei~~HpfF~~i  456 (689)
T 3v5w_A          432 DVNRRLGCLGRGAQEVKESPFFRSL  456 (689)
T ss_dssp             CGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred             CHhHCCCCCCCCHHHHhcCccccCC
Confidence            9999997     7999999999875

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.89  E-value=3.8e-23  Score=122.92  Aligned_cols=94  Identities=21%  Similarity=0.227  Sum_probs=75.7

Q ss_pred             CccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQLDMS---YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~~~~---~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      +.|+|||++.+..   ++.++|+||+|++++++++|..||...........+.............+..+.+++.+||..|
T Consensus       201 ~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  280 (298)
T 2zv2_A          201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKN  280 (298)
T ss_dssp             GGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSC
T ss_pred             ccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcC
Confidence            3699999987755   3668999999999999999999998877665554444443333332345788999999999999


Q ss_pred             CCCCCCHHHHhcCcccc
Q psy2811          78 LEERPFAKELLRHPLLK   94 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~   94 (108)
                      |.+||++.++++||||+
T Consensus       281 p~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          281 PESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             TTTSCCHHHHTTCHHHH
T ss_pred             hhhCCCHHHHhcCcccc
Confidence            99999999999999996

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.89  E-value=5.7e-23  Score=123.48  Aligned_cols=94  Identities=24%  Similarity=0.321  Sum_probs=81.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+......++.......+.  ..+.++.+++.+||..||++
T Consensus       167 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dp~~  244 (318)
T 1fot_A          167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP--FFNEDVKDLLSRLITRDLSQ  244 (318)
T ss_dssp             TTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTT
T ss_pred             ccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHH
Confidence            4699999999999999999999999999999999999988877766666555443322  45788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     +++++++||||++.
T Consensus       245 R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          245 RLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             CTTSSTTTTHHHHTSGGGSSC
T ss_pred             cCCCcCCCHHHHhcCccccCC
Confidence            99     89999999999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.89  E-value=6.3e-23  Score=121.09  Aligned_cols=100  Identities=20%  Similarity=0.210  Sum_probs=81.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+.........+.........  ....+..+.+++.+||..||
T Consensus       171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  250 (284)
T 3kk8_A          171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP  250 (284)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSST
T ss_pred             cCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccCh
Confidence            3699999999988999999999999999999999999888776655555444332222  12457889999999999999


Q ss_pred             CCCCCHHHHhcCcccccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      ++||++.++++|+||+......
T Consensus       251 ~~Rps~~~~l~h~~~~~~~~~~  272 (284)
T 3kk8_A          251 KKRITADQALKVPWICNRERVA  272 (284)
T ss_dssp             TTSCCHHHHTTSHHHHSCCCGG
T ss_pred             hhCCCHHHHhcCccccCChhHH
Confidence            9999999999999998765443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.89  E-value=2.7e-23  Score=124.22  Aligned_cols=90  Identities=23%  Similarity=0.339  Sum_probs=67.7

Q ss_pred             Ccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh-ccCCCC-CC--CCCcCCcHHHHHHHHHH
Q psy2811           1 MSVIACEQQLD---MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ-IPRNPP-PQ--LTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         1 ~~y~ape~~~~---~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~-~~~~~~-~~--~~~~~~~~~~~~l~~~~   73 (108)
                      +.|||||++.+   ..|+.++||||+|+++|+|++|..||.+.+....... +..+.. +.  ......+..+.+++.+|
T Consensus       198 ~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~c  277 (307)
T 3omv_A          198 VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADC  277 (307)
T ss_dssp             TTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHH
T ss_pred             CCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHH
Confidence            57999999964   3488899999999999999999999988654433322 222211 11  11224578899999999


Q ss_pred             hhcCCCCCCCHHHHhcC
Q psy2811          74 LRKDLEERPFAKELLRH   90 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~~   90 (108)
                      |..||++||++.+++++
T Consensus       278 l~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          278 VKKVKEERPLFPQILSS  294 (307)
T ss_dssp             TCSSSTTSCCHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHH
Confidence            99999999999988643

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.89  E-value=1.5e-23  Score=127.57  Aligned_cols=94  Identities=21%  Similarity=0.260  Sum_probs=82.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||.+.+..+...++.......+.  ..+..+.+++++||..||.+
T Consensus       188 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~  265 (353)
T 3txo_A          188 PDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTM  265 (353)
T ss_dssp             GGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGG
T ss_pred             cCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHH
Confidence            4699999999999999999999999999999999999998887777777665544332  46788999999999999999


Q ss_pred             CCCH------HHHhcCcccccc
Q psy2811          81 RPFA------KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~------~~~l~~~~~~~~   96 (108)
                      |+++      .++++||||++.
T Consensus       266 R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          266 RLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             STTSGGGTCTHHHHTSGGGTTC
T ss_pred             ccCCcccCCHHHHhhCCcccCC
Confidence            9998      899999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.89  E-value=2.7e-23  Score=124.01  Aligned_cols=98  Identities=22%  Similarity=0.193  Sum_probs=73.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---CC-CCCC------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PP-PQLT------------------   58 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~------------------   58 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+....+...++...   .. ....                  
T Consensus       183 ~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (308)
T 3g33_A          183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPV  262 (308)
T ss_dssp             CSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCH
T ss_pred             ccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcH
Confidence            4699999999999999999999999999999999999888765544433210   00 0000                  


Q ss_pred             ---CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          59 ---KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        59 ---~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                         ....+..+.+++.+||..||++||++.++++|+||+....
T Consensus       263 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~~  305 (308)
T 3g33_A          263 QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEG  305 (308)
T ss_dssp             HHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC-----
T ss_pred             HHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCCC
Confidence               0123577889999999999999999999999999987543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.89  E-value=3.1e-23  Score=126.44  Aligned_cols=96  Identities=20%  Similarity=0.209  Sum_probs=80.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+.......+..+.......  ...+.++.+++.+||..||
T Consensus       194 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  273 (362)
T 2bdw_A          194 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP  273 (362)
T ss_dssp             TTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSG
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCCh
Confidence            46999999999899999999999999999999999999887766666655544333221  2347889999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+||++.++++||||...
T Consensus       274 ~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          274 KKRITADQALKVPWICNR  291 (362)
T ss_dssp             GGSCCHHHHTTSHHHHTH
T ss_pred             hhCcCHHHHhcCcccCCC
Confidence            999999999999999753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.89  E-value=8.3e-23  Score=122.77  Aligned_cols=97  Identities=36%  Similarity=0.592  Sum_probs=79.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||...........+.....+... ....+..+.+++.+||..||+
T Consensus       205 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~  284 (321)
T 2c30_A          205 PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQ  284 (321)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred             ccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChh
Confidence            3699999999888999999999999999999999999888766655555444333222 223467899999999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +||++.++++|+||....
T Consensus       285 ~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          285 ERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             TSCCHHHHHTSGGGGGCC
T ss_pred             hCcCHHHHhcChhhccCC
Confidence            999999999999997654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.89  E-value=1.7e-23  Score=128.26  Aligned_cols=97  Identities=26%  Similarity=0.303  Sum_probs=72.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC-------------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP-------------------------   55 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------------------------   55 (108)
                      +.|+|||++.+..++.++||||+|++++++++|..||.+.+..+.+..+......                         
T Consensus       222 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (382)
T 2vx3_A          222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWN  301 (382)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEE
T ss_pred             ccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccc
Confidence            3599999999999999999999999999999999999987765543332110000                         


Q ss_pred             ----------CCCCcC---------------------------CcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          56 ----------QLTKRF---------------------------DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        56 ----------~~~~~~---------------------------~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                                ...+..                           ....+.+|+.+||..||++|||+.|+++||||+...
T Consensus       302 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          302 LKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             ECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             cccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence                      000000                           013678999999999999999999999999998753

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.88  E-value=3.5e-23  Score=124.63  Aligned_cols=97  Identities=22%  Similarity=0.251  Sum_probs=79.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+....+....+.........  ....+..+.+++.+||..||
T Consensus       181 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  260 (326)
T 2y0a_A          181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP  260 (326)
T ss_dssp             TTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSG
T ss_pred             cCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCCh
Confidence            4699999999888999999999999999999999999888776655554433322211  12346788999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+||++.++++||||+...
T Consensus       261 ~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          261 KKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             GGSCCHHHHHHSTTTSCCS
T ss_pred             hhCCCHHHHhcCCCccCCc
Confidence            9999999999999998653

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.88  E-value=2.7e-23  Score=126.06  Aligned_cols=94  Identities=22%  Similarity=0.324  Sum_probs=81.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+..+...++........  ...+.++.+++.+||..||++
T Consensus       182 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dp~~  259 (345)
T 1xjd_A          182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP--RWLEKEAKDLLVKLFVREPEK  259 (345)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGG
T ss_pred             cccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC--cccCHHHHHHHHHHhcCCHhH
Confidence            469999999999999999999999999999999999998887777666655543332  245788999999999999999


Q ss_pred             CCCHH-HHhcCcccccc
Q psy2811          81 RPFAK-ELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~-~~l~~~~~~~~   96 (108)
                      |+++. ++++||||++.
T Consensus       260 R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          260 RLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             SBTTBSCGGGSGGGTTC
T ss_pred             cCCChHHHHcCccccCC
Confidence            99998 99999999865

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.88  E-value=1e-22  Score=126.95  Aligned_cols=94  Identities=21%  Similarity=0.203  Sum_probs=80.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.+.......+.......+.  ..+.++.+++.+||..||.+
T Consensus       313 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~  390 (446)
T 4ejn_A          313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQ  390 (446)
T ss_dssp             GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTT
T ss_pred             ccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCc--cCCHHHHHHHHHHcccCHHH
Confidence            3699999999999999999999999999999999999988877666665554443322  45788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     ++.++++||||++.
T Consensus       391 R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          391 RLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             STTCSTTTHHHHHTSGGGTTC
T ss_pred             hCCCCCCCHHHHHhCccccCC
Confidence            99     99999999999865

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.88  E-value=1.1e-22  Score=123.60  Aligned_cols=94  Identities=23%  Similarity=0.315  Sum_probs=81.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+......++..+....+.  ..+..+.+++.+||..||.+
T Consensus       202 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dp~~  279 (350)
T 1rdq_E          202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQVDLTK  279 (350)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TCCHHHHHHHHHHSCSCTTT
T ss_pred             ccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHh
Confidence            4699999999999999999999999999999999999988877777666655443322  45788999999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     +.++++|+||++.
T Consensus       280 R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          280 RFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             CTTSSTTTTHHHHTSGGGTTC
T ss_pred             ccCCccCCHHHHHhCcCcCCC
Confidence            998     9999999999864

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.88  E-value=2.4e-23  Score=129.33  Aligned_cols=101  Identities=31%  Similarity=0.369  Sum_probs=73.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C-------------------CCC--
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P-------------------PPQ--   56 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~-------------------~~~--   56 (108)
                      +.|+|||++.+..++.++||||+|++++++++|..||.+.+..+.+..+...   +                   .+.  
T Consensus       263 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  342 (429)
T 3kvw_A          263 RFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYC  342 (429)
T ss_dssp             GGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTS
T ss_pred             CCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccc
Confidence            3599999999999999999999999999999999999887765443222110   0                   000  


Q ss_pred             ------------------------CC---------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccccch
Q psy2811          57 ------------------------LT---------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        57 ------------------------~~---------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~  101 (108)
                                              ..         ....+..+.+|+++||..||++|||+.|+++||||+...+...
T Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~~~  420 (429)
T 3kvw_A          343 TVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPP  420 (429)
T ss_dssp             CEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-------
T ss_pred             cccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCCCC
Confidence                                    00         0012567889999999999999999999999999987755443

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.88  E-value=9.3e-23  Score=124.05  Aligned_cols=94  Identities=15%  Similarity=0.159  Sum_probs=80.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||.+.+..+...++.......+.  ..+.++.+++.+||..||.+
T Consensus       185 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~  262 (353)
T 2i0e_A          185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGK  262 (353)
T ss_dssp             GGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTS
T ss_pred             ccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHHH
Confidence            4699999999999999999999999999999999999988877777666655444322  46788999999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     ++++++|+||+..
T Consensus       263 R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          263 RLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             CTTCSTTHHHHHHTSGGGTTC
T ss_pred             cCCCCCCCHHHHhcCccccCC
Confidence            994     6999999999764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.88  E-value=5.8e-23  Score=121.10  Aligned_cols=98  Identities=22%  Similarity=0.367  Sum_probs=81.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||...........+........  ...+..+.+++.+||..+|.+
T Consensus       171 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~  248 (279)
T 3fdn_A          171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQ  248 (279)
T ss_dssp             CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC--TTSCHHHHHHHHHHCCSSGGG
T ss_pred             CCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC--CcCCHHHHHHHHHHhccChhh
Confidence            469999999988889999999999999999999999998877666555544433322  245788999999999999999


Q ss_pred             CCCHHHHhcCcccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~~  100 (108)
                      ||++.++++|+||+......
T Consensus       249 Rps~~e~l~h~~~~~~~~~~  268 (279)
T 3fdn_A          249 RPMLREVLEHPWITANSSKP  268 (279)
T ss_dssp             SCCHHHHHHCHHHHHHCSSC
T ss_pred             CCCHHHHhhCccccCCccCc
Confidence            99999999999998765443

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.88  E-value=7.7e-23  Score=125.47  Aligned_cols=97  Identities=32%  Similarity=0.503  Sum_probs=71.6

Q ss_pred             cccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-----------------------
Q psy2811           2 SVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-----------------------   56 (108)
Q Consensus         2 ~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-----------------------   56 (108)
                      .|+|||++.+  ..++.++|+||+|++++++++|..||.+.+.......+.....+.                       
T Consensus       200 ~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (389)
T 3gni_B          200 PWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANS  279 (389)
T ss_dssp             GGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC------------------------------
T ss_pred             cccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcccccccccccccccccccccccc
Confidence            4999999987  578899999999999999999999998765444333322211110                       


Q ss_pred             ---------------------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          57 ---------------------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        57 ---------------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                                           ......+..+.+|+.+||..||++||++.++++||||+....
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          280 GLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             --------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             ccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence                                 011123677899999999999999999999999999987643

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=8.5e-23  Score=123.37  Aligned_cols=98  Identities=22%  Similarity=0.299  Sum_probs=79.7

Q ss_pred             Ccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||.+.+  ..++.++|+||+|++++++++|..||.+....+....+.........+  ...+..+.+++.+||..
T Consensus       238 ~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  317 (345)
T 3hko_A          238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNR  317 (345)
T ss_dssp             GGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCS
T ss_pred             ccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCC
Confidence            35999999875  667889999999999999999999999887766665554444332221  12478899999999999


Q ss_pred             CCCCCCCHHHHhcCcccccccc
Q psy2811          77 DLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      +|.+||++.++++||||+....
T Consensus       318 ~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          318 NVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             CTTTSCCHHHHHHSHHHHTTSS
T ss_pred             ChhHCCCHHHHhcChhhccChH
Confidence            9999999999999999987654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.88  E-value=2.4e-22  Score=119.78  Aligned_cols=98  Identities=22%  Similarity=0.251  Sum_probs=80.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||...........+.........  ....+..+.+++.+||..||
T Consensus       171 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  250 (304)
T 2jam_A          171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP  250 (304)
T ss_dssp             CCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSST
T ss_pred             CCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCCh
Confidence            4699999999888999999999999999999999999887766655555444322211  12347889999999999999


Q ss_pred             CCCCCHHHHhcCcccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .+||++.++++|+||++...
T Consensus       251 ~~Rps~~~~l~h~~~~~~~~  270 (304)
T 2jam_A          251 NERYTCEKALSHPWIDGNTA  270 (304)
T ss_dssp             TTSCCHHHHHTSHHHHSSCS
T ss_pred             hHCcCHHHHhcCccccCCCc
Confidence            99999999999999986543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.88  E-value=2e-23  Score=126.26  Aligned_cols=94  Identities=18%  Similarity=0.175  Sum_probs=76.2

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..+ +.++|+||+|+++|++++|..||.+.........+.......  +...+..+.+++++||..||.
T Consensus       171 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~--p~~~s~~~~~li~~~L~~dP~  248 (336)
T 3h4j_B          171 PNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM--PDFLSPGAQSLIRRMIVADPM  248 (336)
T ss_dssp             TTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCC--CTTSCHHHHHHHHTTSCSSGG
T ss_pred             cCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC--cccCCHHHHHHHHHHcCCChh
Confidence            46999999988776 578999999999999999999998765544444443333222  224578899999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +||++.++++||||+..
T Consensus       249 ~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          249 QRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             GSCCHHHHTTCHHHHTT
T ss_pred             HCcCHHHHHhChhhccC
Confidence            99999999999999764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.88  E-value=1.3e-22  Score=122.13  Aligned_cols=96  Identities=24%  Similarity=0.247  Sum_probs=78.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC--CCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL--TKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.........+........  .....+..+.+++.+||..||
T Consensus       197 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  276 (327)
T 3lm5_A          197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNP  276 (327)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSG
T ss_pred             cCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCCh
Confidence            369999999989999999999999999999999999998877665544433322221  112457889999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+||++.++++|+||+..
T Consensus       277 ~~Rpt~~~ll~h~~~~~~  294 (327)
T 3lm5_A          277 EKRPTAEICLSHSWLQQW  294 (327)
T ss_dssp             GGSCCHHHHTTCGGGCCC
T ss_pred             hhCcCHHHHhCCHhhccc
Confidence            999999999999999765

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.88  E-value=9.6e-23  Score=123.73  Aligned_cols=98  Identities=38%  Similarity=0.640  Sum_probs=79.9

Q ss_pred             Cccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      +.|+|||++.   +..++.++||||+|++++++++|..||...+.......+.....+.......+..+.+++.+||..+
T Consensus       214 ~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  293 (348)
T 1u5q_A          214 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKI  293 (348)
T ss_dssp             GGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSS
T ss_pred             cceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccC
Confidence            3699999985   4668889999999999999999999998887766555554444443333355788999999999999


Q ss_pred             CCCCCCHHHHhcCcccccccc
Q psy2811          78 LEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      |++||++.++++|+|+.....
T Consensus       294 P~~Rps~~~ll~h~~~~~~~~  314 (348)
T 1u5q_A          294 PQDRPTSEVLLKHRFVLRERP  314 (348)
T ss_dssp             GGGSCCHHHHTTCHHHHSCCC
T ss_pred             hhhCcCHHHHhhChhhhccCC
Confidence            999999999999999976543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.88  E-value=9.7e-23  Score=121.98  Aligned_cols=98  Identities=23%  Similarity=0.319  Sum_probs=73.4

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc---cCCCCCCC-C-----------------
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNPPPQL-T-----------------   58 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~-~-----------------   58 (108)
                      +.|+|||++.+ ..++.++|+||+|++++++++|..||.+....+....+   .....+.. .                 
T Consensus       183 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (311)
T 3niz_A          183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFE  262 (311)
T ss_dssp             CTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCC
T ss_pred             CCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhccccccc
Confidence            46999999876 56788999999999999999999999876544333222   11111100 0                 


Q ss_pred             -------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          59 -------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        59 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                             ....+.++.+|+.+||..||++||++.++++||||++..+
T Consensus       263 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          263 KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             CCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCCc
Confidence                   0123567889999999999999999999999999987653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.88  E-value=1.7e-22  Score=131.19  Aligned_cols=94  Identities=15%  Similarity=0.161  Sum_probs=83.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..|+.++|+||+|+++|+|++|..||.+.+..+...++.......+.  ..+.++.+|+++||..||.+
T Consensus       506 ~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~  583 (674)
T 3pfq_A          506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGK  583 (674)
T ss_dssp             SSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT--TSCHHHHHHHHHHSCSSSTT
T ss_pred             CcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc--cCCHHHHHHHHHHccCCHHH
Confidence            4799999999999999999999999999999999999998888877777766554433  56788999999999999999


Q ss_pred             CCCH-----HHHhcCcccccc
Q psy2811          81 RPFA-----KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~-----~~~l~~~~~~~~   96 (108)
                      |+++     ++|++|+||++.
T Consensus       584 R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          584 RLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             CTTCSTTHHHHHHSSGGGSSC
T ss_pred             CCCCCCCcHHHHhcCccccCC
Confidence            9987     999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=1.1e-23  Score=126.66  Aligned_cols=97  Identities=25%  Similarity=0.238  Sum_probs=80.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.........+..........  ...+.++.+++.+||..||
T Consensus       167 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp  246 (321)
T 1tki_A          167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKER  246 (321)
T ss_dssp             GGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSG
T ss_pred             hhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCCh
Confidence            46999999988888999999999999999999999999888777666665554333211  1347789999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+||++.++++||||+...
T Consensus       247 ~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          247 KSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             GGSCCHHHHHHSHHHHSCG
T ss_pred             hHCcCHHHHhcChhhccCc
Confidence            9999999999999997653

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.88  E-value=1e-22  Score=119.89  Aligned_cols=101  Identities=19%  Similarity=0.234  Sum_probs=81.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||.+.+. ++.++|+||+|++++++++|..||......+....+..........  ...+..+.+++.+||..||
T Consensus       172 ~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  250 (277)
T 3f3z_A          172 PYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSP  250 (277)
T ss_dssp             TTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             CCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCCh
Confidence            469999998654 8889999999999999999999999887766665555544333221  1346789999999999999


Q ss_pred             CCCCCHHHHhcCcccccccccchh
Q psy2811          79 EERPFAKELLRHPLLKKGAQLAHQ  102 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~~~~~  102 (108)
                      .+||++.++++|+||+........
T Consensus       251 ~~R~s~~~~l~h~~~~~~~~~~~~  274 (277)
T 3f3z_A          251 KQRITSLQALEHEWFEKQLSSSPR  274 (277)
T ss_dssp             TTSCCHHHHTTSHHHHHHHCCSGG
T ss_pred             hhCcCHHHHhcCHHHhcccccccc
Confidence            999999999999999876655543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.88  E-value=8.6e-23  Score=122.91  Aligned_cols=99  Identities=22%  Similarity=0.309  Sum_probs=67.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHhhccCCCCCCCCC--cCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-------MRALFQIPRNPPPQLTK--RFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.+.       .+...++..+.......  ...+.++.+++.
T Consensus       173 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~  252 (325)
T 3kn6_A          173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ  252 (325)
T ss_dssp             -----------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHH
T ss_pred             cCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHH
Confidence            369999999999999999999999999999999999976432       33445555444332221  134778999999


Q ss_pred             HHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          72 ECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      +||..||.+||++.++++|+||++....
T Consensus       253 ~~L~~dP~~Rpt~~ell~h~w~~~~~~~  280 (325)
T 3kn6_A          253 GLLTVDPNKRLKMSGLRYNEWLQDGSQL  280 (325)
T ss_dssp             HHHCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred             HHCCCChhHCCCHHHHhcChhhccCccC
Confidence            9999999999999999999999876544

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.88  E-value=2.5e-22  Score=118.94  Aligned_cols=95  Identities=20%  Similarity=0.390  Sum_probs=73.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+. ..++.++|+||+|++++++++|..||..... ......+.....+.......+..+.+++.+||..||.
T Consensus       194 ~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~  272 (290)
T 1t4h_A          194 PEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKD  272 (290)
T ss_dssp             CCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             cCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChh
Confidence            4699999886 4588899999999999999999999987544 3333334333332222234467899999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +||++.++++||||++.
T Consensus       273 ~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          273 ERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             GSCCHHHHHTSGGGC--
T ss_pred             hCCCHHHHhhCcccccC
Confidence            99999999999999864

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.88  E-value=1.8e-22  Score=119.57  Aligned_cols=96  Identities=24%  Similarity=0.332  Sum_probs=72.7

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCC-CC-------------C-----
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPP-PQ-------------L-----   57 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~-~~-------------~-----   57 (108)
                      +.|+|||++.+ ..++.++|+||+|++++++++|..||.+....+...++..   ... ..             .     
T Consensus       164 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (288)
T 1ob3_A          164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP  243 (288)
T ss_dssp             CTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred             ccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccC
Confidence            46999999876 4578899999999999999999999988766544333211   000 00             0     


Q ss_pred             -----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          58 -----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        58 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                           .....+..+.+++.+||..||++||++.++++||||++.
T Consensus       244 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             CCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             ccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence                 001236778899999999999999999999999999864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.88  E-value=1e-22  Score=122.63  Aligned_cols=97  Identities=23%  Similarity=0.243  Sum_probs=74.4

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---CCC-CCC-----------------
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PPP-QLT-----------------   58 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~~~-~~~-----------------   58 (108)
                      +.|+|||++.+. .++.++||||+|++++++++|..||.+....+....+...   +.. ...                 
T Consensus       201 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (329)
T 3gbz_A          201 LWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRG  280 (329)
T ss_dssp             CTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred             ccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhcc
Confidence            369999999874 4788999999999999999999999888765544433211   000 000                 


Q ss_pred             -------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          59 -------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        59 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                             ....+.++.+|+.+||..||.+||++.++++||||++..
T Consensus       281 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          281 KTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             CCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             ccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence                   001357788999999999999999999999999998753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.88  E-value=1.2e-22  Score=123.51  Aligned_cols=99  Identities=30%  Similarity=0.497  Sum_probs=76.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRAL----------------------------------   46 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~----------------------------------   46 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||...+.....                                  
T Consensus       194 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (360)
T 3eqc_A          194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRP  273 (360)
T ss_dssp             CTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------
T ss_pred             CCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCC
Confidence            4699999999999999999999999999999999999776543221                                  


Q ss_pred             --------hhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          47 --------FQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        47 --------~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                              ..+.....+.......+.++.+|+.+||..||.+||++.++++||||+.....
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  334 (360)
T 3eqc_A          274 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAE  334 (360)
T ss_dssp             CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHHHS
T ss_pred             cccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcchHh
Confidence                    11111222222222346789999999999999999999999999999876543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.88  E-value=1.1e-22  Score=120.17  Aligned_cols=97  Identities=20%  Similarity=0.252  Sum_probs=80.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||...........+........  ...+..+.+++.+||..||.+
T Consensus       176 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~  253 (284)
T 2vgo_A          176 LDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQ  253 (284)
T ss_dssp             GGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC--TTSCHHHHHHHHHHSCSSGGG
T ss_pred             CCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC--CcCCHHHHHHHHHHhhcCHhh
Confidence            369999999998899999999999999999999999988877665555544433222  245788999999999999999


Q ss_pred             CCCHHHHhcCccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~   99 (108)
                      ||++.++++|+||+.....
T Consensus       254 Rps~~~ll~h~~~~~~~~~  272 (284)
T 2vgo_A          254 RLPLKGVMEHPWVKANSRR  272 (284)
T ss_dssp             SCCHHHHHTCHHHHHHCCC
T ss_pred             CCCHHHHhhCHHHHhhccc
Confidence            9999999999999865443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.88  E-value=7e-23  Score=125.88  Aligned_cols=96  Identities=21%  Similarity=0.225  Sum_probs=79.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+.......+.........  ....+.++.+++.+||..||
T Consensus       214 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  293 (387)
T 1kob_A          214 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEP  293 (387)
T ss_dssp             GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSG
T ss_pred             CCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCCh
Confidence            3699999999988999999999999999999999999988776665555443322211  12357889999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+||++.++++|+||++.
T Consensus       294 ~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          294 RKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             GGSCCHHHHHTSTTTSSC
T ss_pred             hHCcCHHHHhhCccccCC
Confidence            999999999999999764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.88  E-value=4.1e-23  Score=125.15  Aligned_cols=97  Identities=28%  Similarity=0.340  Sum_probs=77.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC---CHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL---HPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLR   75 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~   75 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.   ...+....+..+......  ....+..+.+++++||.
T Consensus       184 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~  263 (342)
T 2qr7_A          184 ANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLH  263 (342)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTC
T ss_pred             ccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCC
Confidence            4699999998888899999999999999999999999763   334445555444333221  12457889999999999


Q ss_pred             cCCCCCCCHHHHhcCccccccc
Q psy2811          76 KDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .||++||++.++++||||....
T Consensus       264 ~dP~~R~t~~~il~hp~~~~~~  285 (342)
T 2qr7_A          264 VDPHQRLTAALVLRHPWIVHWD  285 (342)
T ss_dssp             SSTTTSCCHHHHTTSHHHHTGG
T ss_pred             CChhHCcCHHHHhcCCeecCcc
Confidence            9999999999999999996543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.88  E-value=2.1e-22  Score=121.32  Aligned_cols=94  Identities=19%  Similarity=0.303  Sum_probs=79.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.+......++.........  ..+..+.+++.+||..||.+
T Consensus       185 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dp~~  262 (327)
T 3a62_A          185 IEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP--YLTQEARDLLKKLLKRNAAS  262 (327)
T ss_dssp             CTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSCGGG
T ss_pred             cCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHHhcCHhh
Confidence            4699999999988999999999999999999999999988776666665554433322  45788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      ||     ++.++++||||+..
T Consensus       263 R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          263 RLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             STTSSTTTHHHHHHSGGGSSC
T ss_pred             ccCCCCCCHHHHHcCCcccCC
Confidence            99     88999999999764

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.88  E-value=5.6e-23  Score=125.76  Aligned_cols=97  Identities=23%  Similarity=0.146  Sum_probs=80.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.+..+.+..+.........  ....+.++.+|+.+||..||
T Consensus       252 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp  331 (373)
T 2x4f_A          252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEK  331 (373)
T ss_dssp             CTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSG
T ss_pred             CcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCCh
Confidence            4699999998888999999999999999999999999988877666655444322221  12347889999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+||++.++++||||++..
T Consensus       332 ~~Rps~~e~l~hp~~~~~~  350 (373)
T 2x4f_A          332 SWRISASEALKHPWLSDHK  350 (373)
T ss_dssp             GGSCCHHHHHHSHHHHCHH
T ss_pred             hhCCCHHHHhcCcCcCCCc
Confidence            9999999999999998653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.87  E-value=1.7e-22  Score=121.22  Aligned_cols=98  Identities=46%  Similarity=0.836  Sum_probs=78.1

Q ss_pred             ccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      .|+|||++.     +..++.++|+||+|++++++++|..||...........+.....+.......+..+.+++.+||..
T Consensus       194 ~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  273 (326)
T 2x7f_A          194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVK  273 (326)
T ss_dssp             GGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCS
T ss_pred             cccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhcc
Confidence            599999986     456788999999999999999999999887766655554444433333334578899999999999


Q ss_pred             CCCCCCCHHHHhcCccccccccc
Q psy2811          77 DLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        77 ~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      ||.+||++.++++||||++....
T Consensus       274 dp~~Rps~~~ll~hp~~~~~~~~  296 (326)
T 2x7f_A          274 NHSQRPATEQLMKHPFIRDQPNE  296 (326)
T ss_dssp             SGGGSCCHHHHHTSHHHHCCTTH
T ss_pred             ChhhCCCHHHHhhChHHhhCccc
Confidence            99999999999999999876443

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.87  E-value=1.3e-22  Score=119.49  Aligned_cols=97  Identities=21%  Similarity=0.308  Sum_probs=59.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||...........+.......  +...+.++.+++.+||..||++
T Consensus       176 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~  253 (278)
T 3cok_A          176 PNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM--PSFLSIEAKDLIHQLLRRNPAD  253 (278)
T ss_dssp             ----------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCC--CTTSCHHHHHHHHHHSCSSGGG
T ss_pred             CCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCC--ccccCHHHHHHHHHHcccCHhh
Confidence            36999999988888999999999999999999999998765444444433332221  2245788999999999999999


Q ss_pred             CCCHHHHhcCccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~   99 (108)
                      ||++.++++|+||......
T Consensus       254 Rps~~~~l~h~~~~~~~~~  272 (278)
T 3cok_A          254 RLSLSSVLDHPFMSRNSST  272 (278)
T ss_dssp             SCCHHHHTTSTTTC-----
T ss_pred             CCCHHHHhcCccccCCCCc
Confidence            9999999999999876543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.87  E-value=2.4e-22  Score=123.57  Aligned_cols=96  Identities=23%  Similarity=0.336  Sum_probs=73.9

Q ss_pred             Ccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcCCcHHHHH
Q psy2811           1 MSVIACEQQLD-----------MSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCD   68 (108)
Q Consensus         1 ~~y~ape~~~~-----------~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (108)
                      +.|+|||++.+           ..++.++||||+|+++|++++|..||.... ....+..+.........+...+..+.+
T Consensus       220 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (390)
T 2zmd_A          220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD  299 (390)
T ss_dssp             GGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHH
T ss_pred             CCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHH
Confidence            46999999865           357889999999999999999999998753 333444444333322222244678999


Q ss_pred             HHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          69 FVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        69 l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ++.+||..||.+||++.++++||||+..
T Consensus       300 li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          300 VLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            9999999999999999999999999754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.87  E-value=4.4e-23  Score=126.54  Aligned_cols=95  Identities=24%  Similarity=0.206  Sum_probs=74.3

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC------------------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ------------------------   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------------------   56 (108)
                      .|+|||++.+ ..++.++|+||+|++++++++|.+||.+.+..+.+.++......+                        
T Consensus       195 ~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  274 (388)
T 3oz6_A          195 WYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKV  274 (388)
T ss_dssp             GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHC
T ss_pred             CcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccc
Confidence            5999999887 678899999999999999999999999887665544432110000                        


Q ss_pred             ---------------------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 ---------------------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ---------------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                           ......+.++.+|+.+||..||.+|+|+.++++||||+..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          275 EIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             C-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             cccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence                                 0001336788999999999999999999999999998754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.87  E-value=3.7e-22  Score=118.14  Aligned_cols=95  Identities=25%  Similarity=0.303  Sum_probs=74.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+. ..++.++|+||+|++++++++|..||.+.........+........ .....+..+.+++.+||..||+
T Consensus       190 ~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  268 (285)
T 3is5_A          190 ALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPE  268 (285)
T ss_dssp             GGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTT
T ss_pred             cCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChh
Confidence            3599999875 5678899999999999999999999998876655444333322221 1123467889999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +||++.++++||||+.+
T Consensus       269 ~Rps~~e~l~hp~f~~a  285 (285)
T 3is5_A          269 RRPSAAQVLHHEWFKQA  285 (285)
T ss_dssp             TSCCHHHHHTSGGGGC-
T ss_pred             hCcCHHHHhcCHHhhcC
Confidence            99999999999999863

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.87  E-value=1.5e-22  Score=121.68  Aligned_cols=98  Identities=19%  Similarity=0.242  Sum_probs=75.2

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCCCCC-C------------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPPQL-T------------------   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~-~------------------   58 (108)
                      .|+|||++.+ ..++.++|+||+|++++++++|..||.+.+..+....+..   .+.... .                  
T Consensus       165 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (324)
T 3mtl_A          165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRA  244 (324)
T ss_dssp             GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCC
T ss_pred             cccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccc
Confidence            5999999876 5678899999999999999999999998876554433211   111100 0                  


Q ss_pred             ------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          59 ------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        59 ------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                            ....+..+.+|+.+||..||++||++.|+++||||.+....
T Consensus       245 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  291 (324)
T 3mtl_A          245 EALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER  291 (324)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred             hhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence                  01235678899999999999999999999999999876543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.87  E-value=6.8e-23  Score=128.35  Aligned_cols=95  Identities=21%  Similarity=0.255  Sum_probs=74.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C-------------------CCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P-------------------PPQLT   58 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~-------------------~~~~~   58 (108)
                      +.|+|||++.+..|+.++||||+|+++++|++|..||.+.+..+.+.++...   +                   +....
T Consensus       227 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~  306 (464)
T 3ttj_A          227 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG  306 (464)
T ss_dssp             CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCC
T ss_pred             ccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCC
Confidence            4699999999999999999999999999999999999988765544433211   0                   00000


Q ss_pred             -------Cc-----C------CcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          59 -------KR-----F------DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        59 -------~~-----~------~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                             +.     .      .+.++.+|+.+||..||++|+|+.|+++||||+.
T Consensus       307 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          307 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             CChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence                   00     0      0456889999999999999999999999999974

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.87  E-value=3e-22  Score=121.19  Aligned_cols=96  Identities=23%  Similarity=0.336  Sum_probs=73.3

Q ss_pred             Ccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcCCcHHHHH
Q psy2811           1 MSVIACEQQLD-----------MSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCD   68 (108)
Q Consensus         1 ~~y~ape~~~~-----------~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (108)
                      +.|+|||++.+           ..++.++||||+|++++++++|..||.... .......+.........+...+..+.+
T Consensus       173 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  252 (343)
T 3dbq_A          173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD  252 (343)
T ss_dssp             CSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHH
T ss_pred             cCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHH
Confidence            46999999865           667889999999999999999999998743 333333333332222222345678999


Q ss_pred             HHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          69 FVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        69 l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ++.+||..||.+||++.++++||||+..
T Consensus       253 li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          253 VLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             HHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            9999999999999999999999999754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.87  E-value=2.4e-22  Score=126.34  Aligned_cols=97  Identities=25%  Similarity=0.304  Sum_probs=80.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+ .++.++|+||+|+++|++++|..||.+.+..+....+..+......+  ...+..+.+++.+||..+|
T Consensus       187 ~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp  265 (486)
T 3mwu_A          187 AYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHP  265 (486)
T ss_dssp             GGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSST
T ss_pred             CCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCCh
Confidence            46999999876 58889999999999999999999999988777766665554332221  2347889999999999999


Q ss_pred             CCCCCHHHHhcCcccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .+||++.++++||||+....
T Consensus       266 ~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          266 SLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             TTSCCHHHHHHCHHHHHTCC
T ss_pred             hhCcCHHHHhcCHhhccCcc
Confidence            99999999999999986543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.87  E-value=4.8e-23  Score=125.14  Aligned_cols=94  Identities=29%  Similarity=0.420  Sum_probs=72.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-----------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-----------------------   57 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------------------   57 (108)
                      +.|+|||++.+..++.++||||+|++++++++|..||.+.+..+....+.....+..                       
T Consensus       223 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  302 (360)
T 3llt_A          223 RQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKL  302 (360)
T ss_dssp             GGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEE
T ss_pred             ccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCccccee
Confidence            369999999999999999999999999999999999988765543332211100000                       


Q ss_pred             --CC-------------------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccc
Q psy2811          58 --TK-------------------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLK   94 (108)
Q Consensus        58 --~~-------------------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~   94 (108)
                        +.                   ...+..+.+|+.+||..||.+||++.++++||||+
T Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          303 AWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             CTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             cCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence              00                   00125677999999999999999999999999995

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.87  E-value=1.2e-22  Score=127.64  Aligned_cols=96  Identities=22%  Similarity=0.289  Sum_probs=80.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+ .++.++|+||+|+++|++++|..||.+.+..+....+..+......+  ...+..+.+++.+||..+|
T Consensus       192 ~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp  270 (484)
T 3nyv_A          192 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVP  270 (484)
T ss_dssp             GGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSG
T ss_pred             ccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCCh
Confidence            46999999876 68899999999999999999999999988877776665554333221  2347889999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      ++||++.++++||||+...
T Consensus       271 ~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          271 SMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             GGSCCHHHHHTSHHHHHHT
T ss_pred             hHCcCHHHHhhChhhcccc
Confidence            9999999999999997643

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.87  E-value=4.2e-22  Score=121.41  Aligned_cols=96  Identities=22%  Similarity=0.269  Sum_probs=73.3

Q ss_pred             CccccccccccCCCCcc-hhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhh
Q psy2811           1 MSVIACEQQLDMSYDAR-CDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~-~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   75 (108)
                      +.|+|||++.+..++.+ +|+||+|+++|++++|..||.+...    ......+.............+..+.+|+.+||.
T Consensus       181 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~  260 (361)
T 3uc3_A          181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFV  260 (361)
T ss_dssp             CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSC
T ss_pred             CCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHcc
Confidence            46999999988888765 8999999999999999999987543    233333333333333322457889999999999


Q ss_pred             cCCCCCCCHHHHhcCcccccc
Q psy2811          76 KDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      .||.+||++.++++||||...
T Consensus       261 ~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          261 ADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             SCTTTSCCHHHHHTSHHHHTT
T ss_pred             CChhHCcCHHHHHhCcchhcC
Confidence            999999999999999999644

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.87  E-value=2.4e-22  Score=120.52  Aligned_cols=99  Identities=25%  Similarity=0.274  Sum_probs=74.7

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCCCC--------------------
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPPQ--------------------   56 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~--------------------   56 (108)
                      +.|+|||++.+ ..++.++|+||+|++++++++|..||.+.+..+....+..   .....                    
T Consensus       172 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (317)
T 2pmi_A          172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPP  251 (317)
T ss_dssp             CTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCC
T ss_pred             ccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccc
Confidence            46999999876 4578899999999999999999999988776544333211   00000                    


Q ss_pred             ---------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          57 ---------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        57 ---------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                               ......+..+.+|+.+||..||.+||++.++++||||+.....
T Consensus       252 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  303 (317)
T 2pmi_A          252 RDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH  303 (317)
T ss_dssp             CCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred             hhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence                     0001235688999999999999999999999999999876443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.87  E-value=2e-22  Score=120.99  Aligned_cols=97  Identities=23%  Similarity=0.253  Sum_probs=79.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+....+....+.........  ....+..+.+++.+||..||
T Consensus       182 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp  261 (321)
T 2a2a_A          182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKET  261 (321)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSST
T ss_pred             CCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCCh
Confidence            3699999999888999999999999999999999999988776666555444332221  12346788999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+||++.++++||||+...
T Consensus       262 ~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          262 RKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             TTSCCHHHHHHSTTTSCSS
T ss_pred             hhCcCHHHHhcCccccCCC
Confidence            9999999999999998653

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.87  E-value=4.4e-23  Score=126.19  Aligned_cols=97  Identities=14%  Similarity=0.084  Sum_probs=74.6

Q ss_pred             CccccccccccC-----------CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHH
Q psy2811           1 MSVIACEQQLDM-----------SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDF   69 (108)
Q Consensus         1 ~~y~ape~~~~~-----------~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   69 (108)
                      +.|+|||++.+.           .++.++||||+|+++|++++|..||.+.........+....      ...+..+.++
T Consensus       266 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~------~~~~~~~~~l  339 (377)
T 3byv_A          266 RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSC------KNIPQPVRAL  339 (377)
T ss_dssp             TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSSC------CCCCHHHHHH
T ss_pred             cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhhc------cCCCHHHHHH
Confidence            479999999887           78999999999999999999999997765443333332221      2446789999


Q ss_pred             HHHHhhcCCCCCCCHHHHhcCcccccccccchhh
Q psy2811          70 VNECLRKDLEERPFAKELLRHPLLKKGAQLAHQE  103 (108)
Q Consensus        70 ~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~~~~  103 (108)
                      +.+||..||.+||++.++++|+||+.........
T Consensus       340 i~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~~~  373 (377)
T 3byv_A          340 LEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAA  373 (377)
T ss_dssp             HHHHTCSSGGGCCCHHHHHTSHHHHHHHHHHHHH
T ss_pred             HHHHcCCCchhCCCHHHHhhChHHHHHHHHHHHh
Confidence            9999999999999999999999998776554433

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.87  E-value=2.1e-22  Score=119.08  Aligned_cols=98  Identities=36%  Similarity=0.568  Sum_probs=74.6

Q ss_pred             Ccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhh
Q psy2811           1 MSVIACEQQ----LDMSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         1 ~~y~ape~~----~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~   75 (108)
                      +.|+|||.+    .+..++.++|+||+|++++++++|..||... ..............+.......+..+.+++.+||.
T Consensus       173 ~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  252 (290)
T 3fme_A          173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLK  252 (290)
T ss_dssp             CCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTC
T ss_pred             ccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhh
Confidence            469999996    4566788999999999999999999999863 33333333333333333333457889999999999


Q ss_pred             cCCCCCCCHHHHhcCcccccccc
Q psy2811          76 KDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .||++||++.++++||||+....
T Consensus       253 ~~p~~Rpt~~e~l~hp~f~~~~~  275 (290)
T 3fme_A          253 KNSKERPTYPELMQHPFFTLHES  275 (290)
T ss_dssp             SSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             cChhhCcCHHHHHhCcccccCcc
Confidence            99999999999999999986543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.87  E-value=2.1e-22  Score=122.24  Aligned_cols=98  Identities=21%  Similarity=0.186  Sum_probs=77.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMR-ALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~   77 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||....... ....+.........  ....+..+.+++.+||..|
T Consensus       214 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  293 (349)
T 2w4o_A          214 PGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLD  293 (349)
T ss_dssp             GGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSS
T ss_pred             CCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCC
Confidence            36999999999889999999999999999999999997654333 33444333322221  1234778999999999999


Q ss_pred             CCCCCCHHHHhcCcccccccc
Q psy2811          78 LEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      |++||++.++++||||.+...
T Consensus       294 P~~Rpt~~e~l~hp~~~~~~~  314 (349)
T 2w4o_A          294 PKKRLTTFQALQHPWVTGKAA  314 (349)
T ss_dssp             GGGSCCHHHHHHSTTTTSTTC
T ss_pred             hhhCcCHHHHhcCcccCCCcc
Confidence            999999999999999986543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.87  E-value=9.6e-23  Score=124.44  Aligned_cols=100  Identities=11%  Similarity=0.038  Sum_probs=75.2

Q ss_pred             Ccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHhh-----ccCCCCCCCCCcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLHPMR--ALFQ-----IPRNPPPQLTKRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+  ..++.++|+||+|+++|++++|..||.+.....  ....     ..............+..+.+++.
T Consensus       255 ~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  334 (371)
T 3q60_A          255 VTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG  334 (371)
T ss_dssp             GGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHH
T ss_pred             cCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHH
Confidence            46999999987  678999999999999999999999998763221  1111     01111111111245788999999


Q ss_pred             HHhhcCCCCCCCHHHHhcCcccccccccc
Q psy2811          72 ECLRKDLEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      +||..||++||++.++++||||+......
T Consensus       335 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  363 (371)
T 3q60_A          335 RFLNFDRRRRLLPLEAMETPEFLQLQNEI  363 (371)
T ss_dssp             HHTCSSTTTCCCHHHHTTSHHHHHHHHHH
T ss_pred             HHcCCChhhCCCHHHHhcCHHHHHHHHHH
Confidence            99999999999999999999998765443

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.87  E-value=2e-22  Score=121.19  Aligned_cols=98  Identities=23%  Similarity=0.338  Sum_probs=74.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc---cCCCCC----------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNPPP----------------------   55 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~---~~~~~~----------------------   55 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||...+..+....+   ....+.                      
T Consensus       198 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  277 (339)
T 1z57_A          198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEH  277 (339)
T ss_dssp             GGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTT
T ss_pred             ccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcccccccc
Confidence            3699999999989999999999999999999999999887654432211   110000                      


Q ss_pred             -----------------CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          56 -----------------QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        56 -----------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                                       .......+..+.+++.+||..||.+||++.++++||||+....
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          278 SSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             SHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             ccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence                             0000112456889999999999999999999999999987643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.87  E-value=2.9e-22  Score=121.65  Aligned_cols=96  Identities=24%  Similarity=0.235  Sum_probs=76.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+.. ......+..........  ...+..+.+++.+||..||
T Consensus       197 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  275 (351)
T 3c0i_A          197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDP  275 (351)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             cCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCCh
Confidence            36999999999889999999999999999999999998754 23333333333222111  1347789999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      .+||++.++++|+||+...
T Consensus       276 ~~R~s~~e~l~hp~~~~~~  294 (351)
T 3c0i_A          276 AERITVYEALNHPWLKERD  294 (351)
T ss_dssp             TTSCCHHHHHTSHHHHTHH
T ss_pred             hHCcCHHHHhcChhhcCCc
Confidence            9999999999999998643

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.87  E-value=4.9e-22  Score=121.64  Aligned_cols=94  Identities=22%  Similarity=0.206  Sum_probs=80.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||.+.+..+...++.........  ..+..+.+++.+||..||.+
T Consensus       203 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~li~~lL~~dp~~  280 (373)
T 2r5t_A          203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP--NITNSARHLLEGLLQKDRTK  280 (373)
T ss_dssp             CCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCS--SSCHHHHHHHHHHTCSSGGG
T ss_pred             ccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHHHHHHHHHcccCHHh
Confidence            4699999999999999999999999999999999999988877777666655443322  45788999999999999999


Q ss_pred             CCCH----HHHhcCcccccc
Q psy2811          81 RPFA----KELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~----~~~l~~~~~~~~   96 (108)
                      |+++    .++++|+||++.
T Consensus       281 R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          281 RLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             STTTTTTHHHHHTSGGGTTC
T ss_pred             CCCCCCCHHHHhCCccccCC
Confidence            9986    689999999864

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.87  E-value=4.8e-22  Score=124.85  Aligned_cols=94  Identities=21%  Similarity=0.221  Sum_probs=78.7

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..+ +.++|+||+|+++|++++|..||.+.+......++..+....+  ...+.++.+++++||..||.
T Consensus       179 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~Li~~~L~~dP~  256 (476)
T 2y94_A          179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP--QYLNPSVISLLKHMLQVDPM  256 (476)
T ss_dssp             STTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC--TTCCHHHHHHHHHHTCSSTT
T ss_pred             cCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC--ccCCHHHHHHHHHHcCCCch
Confidence            46999999988776 5689999999999999999999998776666666655543322  24578899999999999999


Q ss_pred             CCCCHHHHhcCcccccc
Q psy2811          80 ERPFAKELLRHPLLKKG   96 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~   96 (108)
                      +||++.++++||||+..
T Consensus       257 ~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          257 KRATIKDIREHEWFKQD  273 (476)
T ss_dssp             TSCCHHHHHTCHHHHTT
T ss_pred             hCcCHHHHHhCHHhhhc
Confidence            99999999999999764

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.87  E-value=4.6e-22  Score=125.29  Aligned_cols=95  Identities=25%  Similarity=0.370  Sum_probs=79.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++. ..++.++|+||+|+++|++++|..||.+....+....+..+......+  ...+..+.+++++||..+|
T Consensus       202 ~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp  280 (494)
T 3lij_A          202 AYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDS  280 (494)
T ss_dssp             TTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSST
T ss_pred             cCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCCh
Confidence            4699999886 568899999999999999999999999988777766665554433222  2357889999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+||++.++++||||+..
T Consensus       281 ~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          281 QRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             TTSCCHHHHHTCHHHHHH
T ss_pred             hhCccHHHHhcCcccccC
Confidence            999999999999999864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.87  E-value=8.9e-22  Score=117.63  Aligned_cols=98  Identities=46%  Similarity=0.827  Sum_probs=78.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC-CCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL-TKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...........+........ .....+..+.+++.+||..||.+
T Consensus       190 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  269 (314)
T 3com_A          190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQ  269 (314)
T ss_dssp             GGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTT
T ss_pred             CccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhh
Confidence            59999999988899999999999999999999999988776554444333322221 22234778999999999999999


Q ss_pred             CCCHHHHhcCccccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~~   99 (108)
                      ||++.++++|+||+.....
T Consensus       270 Rpt~~~ll~~~~~~~~~~~  288 (314)
T 3com_A          270 RATATQLLQHPFVRSAKGV  288 (314)
T ss_dssp             SCCHHHHTTSHHHHTCCCG
T ss_pred             CcCHHHHHhCHHHhcCCcc
Confidence            9999999999999876533

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.86  E-value=7.9e-22  Score=119.62  Aligned_cols=94  Identities=22%  Similarity=0.264  Sum_probs=73.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC---------CHHHHHhhccCCCCCCCCCcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL---------HPMRALFQIPRNPPPQLTKRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||...         ........+.......+  ...+..+.+++.
T Consensus       174 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~  251 (345)
T 3a8x_A          174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP--RSLSVKAASVLK  251 (345)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC--TTSCHHHHHHHH
T ss_pred             ccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC--CCCCHHHHHHHH
Confidence            4699999999999999999999999999999999999652         11222333333332222  245788999999


Q ss_pred             HHhhcCCCCCCCH------HHHhcCcccccc
Q psy2811          72 ECLRKDLEERPFA------KELLRHPLLKKG   96 (108)
Q Consensus        72 ~~l~~~p~~R~~~------~~~l~~~~~~~~   96 (108)
                      +||..||.+|+++      .++++||||++.
T Consensus       252 ~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          252 SFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             HHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             HHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            9999999999985      899999999764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.86  E-value=2.1e-22  Score=123.01  Aligned_cols=95  Identities=21%  Similarity=0.264  Sum_probs=74.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC----------------------CC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ----------------------LT   58 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------------------~~   58 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.+..+....+.......                      ..
T Consensus       190 ~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (371)
T 2xrw_A          190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG  269 (371)
T ss_dssp             CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCC
T ss_pred             CCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccc
Confidence            46999999999899999999999999999999999999887655544432211100                      00


Q ss_pred             ------------Cc------CCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          59 ------------KR------FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        59 ------------~~------~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                                  +.      ..+..+.+|+.+||..||.+|||+.++++||||+.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          270 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence                        00      01456889999999999999999999999999975

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.86  E-value=7e-22  Score=121.85  Aligned_cols=97  Identities=22%  Similarity=0.271  Sum_probs=75.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH----HHhhccCCCCCCC--CCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMR----ALFQIPRNPPPQL--TKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|..||.+.....    ....+..+.....  .....+.++.+|+++||
T Consensus       227 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  306 (400)
T 1nxk_A          227 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL  306 (400)
T ss_dssp             CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTS
T ss_pred             CCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHC
Confidence            46999999999999999999999999999999999997654221    1222222222211  11245788999999999


Q ss_pred             hcCCCCCCCHHHHhcCccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ..||.+||++.++++|+||....
T Consensus       307 ~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          307 KTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             CSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CCChhHCcCHHHHhcCccccCCC
Confidence            99999999999999999997654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.86  E-value=2.9e-22  Score=121.15  Aligned_cols=98  Identities=22%  Similarity=0.320  Sum_probs=74.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc---cCCCCC----------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNPPP----------------------   55 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~---~~~~~~----------------------   55 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+....+....+   ....+.                      
T Consensus       203 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  282 (355)
T 2eu9_A          203 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDEN  282 (355)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTT
T ss_pred             CcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccc
Confidence            3699999999999999999999999999999999999887654332211   110000                      


Q ss_pred             -----------------CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          56 -----------------QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        56 -----------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                                       .......+..+.+++.+||..||++||++.++++||||++...
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  342 (355)
T 2eu9_A          283 SSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTP  342 (355)
T ss_dssp             SHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCH
T ss_pred             cchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCCh
Confidence                             0000011357889999999999999999999999999997654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.86  E-value=6.2e-22  Score=120.80  Aligned_cols=95  Identities=22%  Similarity=0.314  Sum_probs=75.4

Q ss_pred             Ccccccccccc------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHH
Q psy2811           1 MSVIACEQQLD------MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~~------~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~   72 (108)
                      +.|+|||++.+      ..++.++|+||+|+++|++++|..||...........+.........+  ...+..+.+++.+
T Consensus       263 ~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  342 (365)
T 2y7j_A          263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISR  342 (365)
T ss_dssp             GGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHH
T ss_pred             CCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHH
Confidence            36999999864      357889999999999999999999998877666555544443322211  1346779999999


Q ss_pred             HhhcCCCCCCCHHHHhcCccccc
Q psy2811          73 CLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        73 ~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                      ||..||.+||++.++++||||+.
T Consensus       343 ~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          343 LLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HcCCChhHCcCHHHHhcCcccCC
Confidence            99999999999999999999963

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.86  E-value=7.3e-22  Score=121.68  Aligned_cols=94  Identities=21%  Similarity=0.243  Sum_probs=74.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---------HHHHHhhccCCCCCCCCCcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH---------PMRALFQIPRNPPPQLTKRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||....         .......+.......+.  ..+.++.++++
T Consensus       217 ~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~  294 (396)
T 4dc2_A          217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLK  294 (396)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT--TSCHHHHHHHH
T ss_pred             cccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC--cCCHHHHHHHH
Confidence            46999999999999999999999999999999999996431         11122333333333222  45788999999


Q ss_pred             HHhhcCCCCCCCH------HHHhcCcccccc
Q psy2811          72 ECLRKDLEERPFA------KELLRHPLLKKG   96 (108)
Q Consensus        72 ~~l~~~p~~R~~~------~~~l~~~~~~~~   96 (108)
                      +||..||.+|+++      .++++||||++.
T Consensus       295 ~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          295 SFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             HHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             HHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            9999999999984      799999999865

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.86  E-value=3.2e-22  Score=120.24  Aligned_cols=101  Identities=40%  Similarity=0.580  Sum_probs=64.8

Q ss_pred             Ccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhccCCCCCCCCC---cCCcHHHHHHHHH
Q psy2811           1 MSVIACEQQ----LDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTK---RFDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~----~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~   72 (108)
                      +.|+|||.+    .+..++.++|+||+|++++++++|..||..... .+....+..+..+....   ...+..+.+++.+
T Consensus       189 ~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  268 (327)
T 3aln_A          189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNL  268 (327)
T ss_dssp             -----------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHH
T ss_pred             ccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHH
Confidence            359999998    456688899999999999999999999987542 23333333333222221   2347789999999


Q ss_pred             HhhcCCCCCCCHHHHhcCcccccccccch
Q psy2811          73 CLRKDLEERPFAKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        73 ~l~~~p~~R~~~~~~l~~~~~~~~~~~~~  101 (108)
                      ||..||.+||++.++++||||........
T Consensus       269 ~l~~dp~~Rps~~ell~hp~~~~~~~~~~  297 (327)
T 3aln_A          269 CLTKDESKRPKYKELLKHPFILMYEERAV  297 (327)
T ss_dssp             HTCSSGGGSCCHHHHTTSHHHHHHHHSCC
T ss_pred             HhhCChhhCcCHHHHHhChHHHHhHhhHH
Confidence            99999999999999999999987654443

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.86  E-value=4.7e-22  Score=118.70  Aligned_cols=98  Identities=21%  Similarity=0.317  Sum_probs=73.5

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---------------------CCCCCCC-
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---------------------NPPPQLT-   58 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---------------------~~~~~~~-   58 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+....+....+..                     ...+... 
T Consensus       167 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (311)
T 4agu_A          167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPED  246 (311)
T ss_dssp             GGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSS
T ss_pred             cccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccc
Confidence            5999999876 5678899999999999999999999988765543322211                     0000000 


Q ss_pred             -------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          59 -------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        59 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                             ....+..+.+++.+||..||.+||++.++++||||++....
T Consensus       247 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  294 (311)
T 4agu_A          247 MEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI  294 (311)
T ss_dssp             CCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC--
T ss_pred             cchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccCH
Confidence                   01236678899999999999999999999999999876544

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.86  E-value=6.7e-22  Score=117.72  Aligned_cols=96  Identities=50%  Similarity=0.812  Sum_probs=79.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER   81 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R   81 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||...........+.....+... ...+..+.+++.+||..+|.+|
T Consensus       184 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~R  262 (303)
T 3a7i_A          184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE-GNYSKPLKEFVEACLNKEPSFR  262 (303)
T ss_dssp             GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCC-SSCCHHHHHHHHHHCCSSGGGS
T ss_pred             CccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCc-cccCHHHHHHHHHHcCCChhhC
Confidence            599999999888999999999999999999999999887766555444433333222 2457789999999999999999


Q ss_pred             CCHHHHhcCcccccccc
Q psy2811          82 PFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        82 ~~~~~~l~~~~~~~~~~   98 (108)
                      |++.++++|+||.....
T Consensus       263 ps~~~ll~~~~~~~~~~  279 (303)
T 3a7i_A          263 PTAKELLKHKFILRNAK  279 (303)
T ss_dssp             CCHHHHTTCHHHHHHCC
T ss_pred             cCHHHHhhChhhhcCCC
Confidence            99999999999976543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.86  E-value=1.5e-21  Score=116.09  Aligned_cols=97  Identities=42%  Similarity=0.672  Sum_probs=77.8

Q ss_pred             ccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCCcCCcHHHHHHHHHHhh
Q psy2811           2 SVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRFDCVLLCDFVNECLR   75 (108)
Q Consensus         2 ~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~   75 (108)
                      .|+|||.+.     +..++.++|+||+|++++++++|..||...+.......+.....+. ......+..+.+++.+||.
T Consensus       182 ~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  261 (302)
T 2j7t_A          182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALD  261 (302)
T ss_dssp             GGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSC
T ss_pred             hhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcc
Confidence            599999983     5667889999999999999999999998887665554444333222 2222447789999999999


Q ss_pred             cCCCCCCCHHHHhcCcccccccc
Q psy2811          76 KDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .||.+||++.++++|+||+....
T Consensus       262 ~dp~~Rps~~~ll~h~~~~~~~~  284 (302)
T 2j7t_A          262 KNPETRPSAAQLLEHPFVSSITS  284 (302)
T ss_dssp             SCTTTSCCHHHHTTSTTTTTCCC
T ss_pred             cChhhCCCHHHHhcChHHhhhcc
Confidence            99999999999999999987654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.86  E-value=1e-21  Score=118.77  Aligned_cols=99  Identities=24%  Similarity=0.245  Sum_probs=77.7

Q ss_pred             ccccccccccC-CCCc-chhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhccCCCCCCCCC-----------------cC
Q psy2811           2 SVIACEQQLDM-SYDA-RCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTK-----------------RF   61 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~-~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~-----------------~~   61 (108)
                      .|+|||.+.+. .++. ++|+||+|++++++++|..||..... .+....+..........                 ..
T Consensus       215 ~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (348)
T 2pml_X          215 EFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNF  294 (348)
T ss_dssp             GGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------C
T ss_pred             CccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhh
Confidence            59999999877 6666 89999999999999999999987655 44444444443322210                 23


Q ss_pred             CcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccccc
Q psy2811          62 DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        62 ~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      .+..+.+++.+||..||.+||++.++++||||++.....
T Consensus       295 ~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~  333 (348)
T 2pml_X          295 LSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIED  333 (348)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHH
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHH
Confidence            578899999999999999999999999999998765433

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.86  E-value=4.1e-22  Score=120.96  Aligned_cols=96  Identities=26%  Similarity=0.276  Sum_probs=73.6

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---CC-----------C-----------
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PP-----------P-----------   55 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~~-----------~-----------   55 (108)
                      .|+|||++.+.. ++.++||||+|++++++++|..||.+.+.......+...   +.           .           
T Consensus       196 ~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (360)
T 3e3p_A          196 YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIP  275 (360)
T ss_dssp             GGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCC
T ss_pred             ceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCC
Confidence            599999987654 788999999999999999999999987765444333210   00           0           


Q ss_pred             -----CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          56 -----QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        56 -----~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                           .......+..+.+|+.+||..||.+||++.++++||||++..
T Consensus       276 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          276 WSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             cccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence                 000011356789999999999999999999999999998764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.86  E-value=2e-21  Score=116.55  Aligned_cols=99  Identities=23%  Similarity=0.221  Sum_probs=76.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C--------------------CCC-
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P--------------------PPQ-   56 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~--------------------~~~-   56 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+.........+...   +                    ... 
T Consensus       183 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (326)
T 1blx_A          183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI  262 (326)
T ss_dssp             CTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCG
T ss_pred             cceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchh
Confidence            3699999999888999999999999999999999999887765443332210   0                    000 


Q ss_pred             -CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          57 -LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        57 -~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                       ......+..+.+++.+||..||.+||++.++++|+||+.....
T Consensus       263 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~  306 (326)
T 1blx_A          263 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERC  306 (326)
T ss_dssp             GGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             hhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchh
Confidence             0011246778899999999999999999999999999876543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.86  E-value=7.6e-22  Score=118.71  Aligned_cols=96  Identities=13%  Similarity=0.113  Sum_probs=72.8

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRA-LFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..+ +.++|+||+|++++++++|..||........ .................+..+.+++.+||..||
T Consensus       171 ~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  250 (323)
T 3tki_A          171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENP  250 (323)
T ss_dssp             GGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSST
T ss_pred             cCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCCh
Confidence            35999999988776 6689999999999999999999987544221 222222221111222457788899999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+||++.|+++|+||+..
T Consensus       251 ~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          251 SARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             TTSCCHHHHTTCTTTTCC
T ss_pred             hhCcCHHHHhhChhhccc
Confidence            999999999999999754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.86  E-value=6.1e-22  Score=120.01  Aligned_cols=95  Identities=18%  Similarity=0.214  Sum_probs=72.3

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCCCCCCCcC----------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPPQLTKRF----------------   61 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----------------   61 (108)
                      .|+|||++.+ ..++.++|+||+|++++++++|..||.+.........+..   ...+...+..                
T Consensus       193 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (351)
T 3mi9_A          193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQK  272 (351)
T ss_dssp             GGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCC
T ss_pred             CccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccc
Confidence            5999999876 4578899999999999999999999998776544333211   1111110000                


Q ss_pred             -----------CcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          62 -----------DCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        62 -----------~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                 .+..+.+|+.+||..||++||++.|+++|+||+..
T Consensus       273 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          273 RKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             CCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             cCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence                       14568899999999999999999999999999764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.86  E-value=4.6e-22  Score=123.02  Aligned_cols=96  Identities=20%  Similarity=0.222  Sum_probs=78.7

Q ss_pred             CccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMS----YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~----~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..    ++.++|+||+|+++|+|++|..||.+.+......++....  ...+.....+.++++|+++||
T Consensus       233 ~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL  312 (410)
T 3v8s_A          233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL  312 (410)
T ss_dssp             GGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHS
T ss_pred             ccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHc
Confidence            4699999998765    7789999999999999999999999988777666665432  122222245788999999999


Q ss_pred             hcCCCC--CCCHHHHhcCcccccc
Q psy2811          75 RKDLEE--RPFAKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~~--R~~~~~~l~~~~~~~~   96 (108)
                      ..+|.+  |+++.++++||||++.
T Consensus       313 ~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          313 TDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             SCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             cChhhhCCCCCHHHHhcCccccCC
Confidence            988888  9999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.86  E-value=1.1e-21  Score=116.26  Aligned_cols=95  Identities=22%  Similarity=0.227  Sum_probs=69.9

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCC-CCCCCHHHHHhhccC---CCCCC--------------------
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPP-LSDLHPMRALFQIPR---NPPPQ--------------------   56 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~-~~~~~~~~~~~~~~~---~~~~~--------------------   56 (108)
                      .|+|||++.+.. ++.++|+||+|++++++++|..| |.+.+..+....+..   .....                    
T Consensus       166 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (292)
T 3o0g_A          166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT  245 (292)
T ss_dssp             GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTT
T ss_pred             CCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCC
Confidence            599999997765 78899999999999999987666 555554443333211   00000                    


Q ss_pred             ----CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 ----LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ----~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                          ......+..+.+++.+||..||++||++.|+++||||++.
T Consensus       246 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             cchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence                0001236788899999999999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.86  E-value=1e-21  Score=116.52  Aligned_cols=95  Identities=22%  Similarity=0.324  Sum_probs=79.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||......+....+........  ...+..+.+++.+||..||++
T Consensus       179 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~  256 (294)
T 2rku_A          179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP--KHINPVAASLIQKMLQTDPTA  256 (294)
T ss_dssp             CSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC--TTSCHHHHHHHHHHTCSSGGG
T ss_pred             CCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc--cccCHHHHHHHHHHcccChhh
Confidence            359999999888889999999999999999999999998876665555544433222  245678899999999999999


Q ss_pred             CCCHHHHhcCccccccc
Q psy2811          81 RPFAKELLRHPLLKKGA   97 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~   97 (108)
                      ||++.++++|+||....
T Consensus       257 Rps~~~ll~~~~~~~~~  273 (294)
T 2rku_A          257 RPTINELLNDEFFTSGY  273 (294)
T ss_dssp             SCCGGGGGGSHHHHTSC
T ss_pred             CcCHHHHhhChheecCC
Confidence            99999999999997653

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.86  E-value=8.2e-22  Score=122.17  Aligned_cols=96  Identities=20%  Similarity=0.185  Sum_probs=74.2

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC-------------------CCCCC---
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN-------------------PPPQL---   57 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~-------------------~~~~~---   57 (108)
                      +.|+|||++.+. .++.++||||+|+++|+|++|..||.+.+..+.+.++...                   ..+..   
T Consensus       220 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~  299 (420)
T 1j1b_A          220 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH  299 (420)
T ss_dssp             TTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCC
T ss_pred             CCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCC
Confidence            369999998764 6899999999999999999999999987765444332210                   00000   


Q ss_pred             -----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          58 -----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        58 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                           .....+.++.+|+.+||..||.+|+++.++++|+||+..
T Consensus       300 ~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             CHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence                 011236789999999999999999999999999999764

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=1.2e-21  Score=118.73  Aligned_cols=96  Identities=20%  Similarity=0.152  Sum_probs=73.6

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---CC-CCCC-----------------
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PP-PQLT-----------------   58 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~~-~~~~-----------------   58 (108)
                      +.|+|||++.+. .++.++|+||+|++++++++|.+||.+....+.+.++...   .. ....                 
T Consensus       176 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (346)
T 1ua2_A          176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI  255 (346)
T ss_dssp             CTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCC
T ss_pred             ccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCC
Confidence            469999998764 4788999999999999999999999888765544433211   00 0000                 


Q ss_pred             -----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          59 -----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        59 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                           ....+..+.+++.+||..||.+||++.|+++|+||+..
T Consensus       256 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          256 PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             ChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence                 01235788999999999999999999999999999764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.86  E-value=1.1e-21  Score=116.80  Aligned_cols=95  Identities=17%  Similarity=0.193  Sum_probs=77.6

Q ss_pred             ccccccccccCCC--CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSY--DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~--~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||++.+...  +.++|+||+|++++++++|..||.+.+.......+........  ...+..+.+++.+||..||.
T Consensus       176 ~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--~~~~~~l~~li~~~l~~dp~  253 (305)
T 2wtk_C          176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP--GDCGPPLSDLLKGMLEYEPA  253 (305)
T ss_dssp             GGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC--SSSCHHHHHHHHHHTCSSTT
T ss_pred             CCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC--CccCHHHHHHHHHHccCChh
Confidence            6999999876443  6689999999999999999999998877666655554433322  24577899999999999999


Q ss_pred             CCCCHHHHhcCcccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~   98 (108)
                      +||++.++++|+||+....
T Consensus       254 ~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          254 KRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             TSCCHHHHHHSHHHHSCCC
T ss_pred             hCCCHHHHhcCcccccCCC
Confidence            9999999999999986544

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.86  E-value=8.3e-22  Score=118.93  Aligned_cols=95  Identities=22%  Similarity=0.324  Sum_probs=78.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||......+....+........  ...+..+.+++.+||..||.+
T Consensus       205 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~  282 (335)
T 2owb_A          205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP--KHINPVAASLIQKMLQTDPTA  282 (335)
T ss_dssp             CSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC--TTSCHHHHHHHHHHTCSSGGG
T ss_pred             ccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC--ccCCHHHHHHHHHHccCChhH
Confidence            359999999988899999999999999999999999988776665555444333222  245678899999999999999


Q ss_pred             CCCHHHHhcCccccccc
Q psy2811          81 RPFAKELLRHPLLKKGA   97 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~   97 (108)
                      ||++.++++|+||....
T Consensus       283 Rps~~ell~~~~~~~~~  299 (335)
T 2owb_A          283 RPTINELLNDEFFTSGY  299 (335)
T ss_dssp             SCCGGGGGGSHHHHTSC
T ss_pred             CcCHHHHhcCccccCCC
Confidence            99999999999997653

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.86  E-value=1.4e-21  Score=115.13  Aligned_cols=97  Identities=25%  Similarity=0.316  Sum_probs=79.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||...........+..+...... ...+.++.+++.+||..+|.+
T Consensus       180 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  258 (279)
T 2w5a_A          180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP-YRYSDELNEIITRMLNLKDYH  258 (279)
T ss_dssp             CTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCC-TTSCHHHHHHHHHHTCSSGGG
T ss_pred             ccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCC-cccCHHHHHHHHHHcCCCccc
Confidence            3699999999888999999999999999999999999988766655555444433322 245788999999999999999


Q ss_pred             CCCHHHHhcCcccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~   98 (108)
                      ||++.++++|+|+.....
T Consensus       259 Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          259 RPSVEEILENPLILEHHH  276 (279)
T ss_dssp             SCCHHHHHTSTTCCGGGS
T ss_pred             CCCHHHHHhChhhhhhcc
Confidence            999999999999986543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.86  E-value=3.7e-22  Score=119.34  Aligned_cols=98  Identities=27%  Similarity=0.344  Sum_probs=71.1

Q ss_pred             cccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---------------HHHHhhccCCCCCCCCC--
Q psy2811           2 SVIACEQQLD-----MSYDARCDIWSLGITAIELAEGDPPLSDLHP---------------MRALFQIPRNPPPQLTK--   59 (108)
Q Consensus         2 ~y~ape~~~~-----~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---------------~~~~~~~~~~~~~~~~~--   59 (108)
                      .|+|||++.+     ..++.++|+||+|++++++++|..||.+...               ......+..........  
T Consensus       186 ~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  265 (316)
T 2ac3_A          186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDW  265 (316)
T ss_dssp             GGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHH
T ss_pred             CccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhc
Confidence            5999999875     4578899999999999999999999976531               11222333332222111  


Q ss_pred             cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          60 RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        60 ~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      ...+..+.+++.+||..||.+||++.++++||||++....
T Consensus       266 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~  305 (316)
T 2ac3_A          266 AHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPE  305 (316)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-----
T ss_pred             ccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCCc
Confidence            1346788999999999999999999999999999876443

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.86  E-value=8.3e-22  Score=124.40  Aligned_cols=97  Identities=23%  Similarity=0.257  Sum_probs=80.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++. ..++.++|+||+|+++|++++|..||.+.+..+....+..+.......  ...+.++.+++++||..||
T Consensus       212 ~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp  290 (504)
T 3q5i_A          212 AYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDY  290 (504)
T ss_dssp             TTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSST
T ss_pred             cCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCCh
Confidence            4699999986 468899999999999999999999999988877777766554433211  2347889999999999999


Q ss_pred             CCCCCHHHHhcCcccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .+||++.++++||||+....
T Consensus       291 ~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          291 NKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             TTSCCHHHHHTSHHHHHTCC
T ss_pred             hHCCCHHHHhcCHhhhhchh
Confidence            99999999999999976543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.86  E-value=2e-21  Score=114.18  Aligned_cols=98  Identities=12%  Similarity=0.096  Sum_probs=73.4

Q ss_pred             ccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMR-ALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||.+.+..+ +.++|+||+|++++++++|..||....... ....+.............+..+.+++.+||..||.
T Consensus       172 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  251 (276)
T 2yex_A          172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPS  251 (276)
T ss_dssp             GGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTT
T ss_pred             CccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCch
Confidence            5999999987765 668999999999999999999998754321 22222222111111223577889999999999999


Q ss_pred             CCCCHHHHhcCccccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~~   99 (108)
                      +||++.++++|+||+.....
T Consensus       252 ~Rps~~~il~~~~~~~~~~~  271 (276)
T 2yex_A          252 ARITIPDIKKDRWYNKPLKK  271 (276)
T ss_dssp             TSCCHHHHTTCTTTTCCCC-
T ss_pred             hCCCHHHHhcCccccChhhc
Confidence            99999999999999866443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.86  E-value=8.6e-22  Score=121.21  Aligned_cols=96  Identities=25%  Similarity=0.291  Sum_probs=74.3

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC-------------------CCCCC----
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN-------------------PPPQL----   57 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~-------------------~~~~~----   57 (108)
                      .|+|||++.+. .++.++|+||+|++++++++|..||.+.+..+.+..+...                   ..+..    
T Consensus       206 ~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  285 (394)
T 4e7w_A          206 YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHP  285 (394)
T ss_dssp             GGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCC
T ss_pred             CccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCc
Confidence            59999998764 5889999999999999999999999988765544332210                   00000    


Q ss_pred             ----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          58 ----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        58 ----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                          .....+.++.+|+.+||..||.+||++.++++||||+...
T Consensus       286 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          286 FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             HHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             HHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence                0112467899999999999999999999999999998653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.86  E-value=1.2e-21  Score=115.25  Aligned_cols=95  Identities=21%  Similarity=0.214  Sum_probs=75.2

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..+ +.++|+||+|++++++++|..||...........+.......  +...+..+.+++.+||..||.
T Consensus       174 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~  251 (276)
T 2h6d_A          174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI--PEYLNRSVATLLMHMLQVDPL  251 (276)
T ss_dssp             ---CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CTTSCHHHHHHHHHHTCSSGG
T ss_pred             ccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccC--chhcCHHHHHHHHHHccCChh
Confidence            35999999987765 568999999999999999999998877665555544433222  124567889999999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +||++.++++|+||+...
T Consensus       252 ~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          252 KRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             GSCCHHHHHHSHHHHTTC
T ss_pred             hCCCHHHHHhChhhccCc
Confidence            999999999999997654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=2e-21  Score=118.64  Aligned_cols=96  Identities=26%  Similarity=0.337  Sum_probs=74.7

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C------------------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P------------------------   53 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~------------------------   53 (108)
                      .|+|||++.+ ..++.++|+||+|++++++++|..||.+.+..+.+..+...   +                        
T Consensus       190 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (367)
T 1cm8_A          190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE  269 (367)
T ss_dssp             GGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCC
T ss_pred             CcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCC
Confidence            5999999887 67899999999999999999999999987765544332110   0                        


Q ss_pred             CCCC--CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          54 PPQL--TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        54 ~~~~--~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ....  .....+..+.+|+.+||..||.+|+++.++++||||+...
T Consensus       270 ~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          270 KKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             CCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            0000  0012367889999999999999999999999999998653

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.85  E-value=2.5e-21  Score=115.72  Aligned_cols=97  Identities=23%  Similarity=0.334  Sum_probs=73.3

Q ss_pred             Ccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-HHHHHhhccCCCCCCCCCcCCcHHHHH
Q psy2811           1 MSVIACEQQLD-----------MSYDARCDIWSLGITAIELAEGDPPLSDLH-PMRALFQIPRNPPPQLTKRFDCVLLCD   68 (108)
Q Consensus         1 ~~y~ape~~~~-----------~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (108)
                      +.|+|||.+.+           ..++.++|+||+|++++++++|..||.... .......+.........+...+..+.+
T Consensus       192 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  271 (313)
T 3cek_A          192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQD  271 (313)
T ss_dssp             GGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHH
T ss_pred             CCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHH
Confidence            36999999875           467789999999999999999999997653 333333333322222222244678999


Q ss_pred             HHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          69 FVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        69 l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ++.+||..||.+||++.++++|+||+...
T Consensus       272 li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          272 VLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             HHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            99999999999999999999999998654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.85  E-value=2e-21  Score=116.13  Aligned_cols=98  Identities=33%  Similarity=0.524  Sum_probs=74.4

Q ss_pred             Cccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHH
Q psy2811           1 MSVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNEC   73 (108)
Q Consensus         1 ~~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~   73 (108)
                      +.|+|||.+.     +..++.++|+||+|++++++++|..||... ........+.....+... ....+..+.+++.+|
T Consensus       188 ~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  267 (318)
T 2dyl_A          188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDC  267 (318)
T ss_dssp             CTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHH
T ss_pred             ccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHH
Confidence            4699999984     456788999999999999999999999874 344444444443333222 223578899999999


Q ss_pred             hhcCCCCCCCHHHHhcCcccccccc
Q psy2811          74 LRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      |..||.+||++.++++|+||+....
T Consensus       268 l~~dp~~Rps~~~ll~h~~~~~~~~  292 (318)
T 2dyl_A          268 LTKDHRKRPKYNKLLEHSFIKRYET  292 (318)
T ss_dssp             TCSCTTTSCCHHHHTTSHHHHHHHH
T ss_pred             ccCChhHCcCHHHHhhCHHHHhccc
Confidence            9999999999999999999986543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.85  E-value=1.6e-21  Score=119.15  Aligned_cols=96  Identities=26%  Similarity=0.344  Sum_probs=74.3

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C--------------------CCC
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P--------------------PPQ   56 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~--------------------~~~   56 (108)
                      +.|+|||++.+ ..++.++|+||+|++++++++|..||.+.+..+....+...   +                    ...
T Consensus       205 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (371)
T 4exu_A          205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT  284 (371)
T ss_dssp             CTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCC
T ss_pred             ccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCC
Confidence            46999999887 67888999999999999999999999887755443332110   0                    000


Q ss_pred             CC------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 LT------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ~~------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ..      ....+..+.+|+.+||..||++||++.++++||||+..
T Consensus       285 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          285 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             CCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             cchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence            00      01236789999999999999999999999999999864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.85  E-value=8.6e-22  Score=119.99  Aligned_cols=95  Identities=23%  Similarity=0.269  Sum_probs=72.3

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---CCC---------------------CC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPP---------------------PQ   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---~~~---------------------~~   56 (108)
                      .|+|||++.+ ..++.++|+||+|++++++++|..||.+....+....+..   .+.                     ..
T Consensus       196 ~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (364)
T 3qyz_A          196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKN  275 (364)
T ss_dssp             GGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCC
T ss_pred             CCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCcc
Confidence            5999998765 4588899999999999999999999988765444333211   000                     00


Q ss_pred             CC-----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 LT-----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ~~-----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ..     ....+..+.+|+.+||..||.+||++.++++||||+..
T Consensus       276 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          276 KVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             CCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             CCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            00     01236778999999999999999999999999999865

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.85  E-value=1.4e-21  Score=116.03  Aligned_cols=99  Identities=39%  Similarity=0.600  Sum_probs=72.0

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--------CcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--------KRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~   71 (108)
                      +.|+|||.+.+ ..++.++|+||+|++++++++|..||.....................        ....+..+.+++.
T Consensus       190 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  269 (303)
T 2vwi_A          190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMIS  269 (303)
T ss_dssp             CTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHH
T ss_pred             ccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHH
Confidence            35999999876 56788999999999999999999999877654433322222111111        1134678899999


Q ss_pred             HHhhcCCCCCCCHHHHhcCccccccccc
Q psy2811          72 ECLRKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      +||..||.+||++.++++|+||+.....
T Consensus       270 ~~l~~dp~~Rps~~~ll~h~~~~~~~~~  297 (303)
T 2vwi_A          270 LCLQKDPEKRPTAAELLRHKFFQKAKNK  297 (303)
T ss_dssp             HHCCSSGGGSCCHHHHHTSTTC------
T ss_pred             HHccCChhhCcCHHHHhhChhhhcCCCC
Confidence            9999999999999999999999876543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.85  E-value=4.5e-22  Score=121.96  Aligned_cols=97  Identities=26%  Similarity=0.290  Sum_probs=75.0

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC-------------------CCCCC---
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN-------------------PPPQL---   57 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~-------------------~~~~~---   57 (108)
                      +.|+|||.+.+. .++.++|+||+|++++++++|..||.+....+.+.++...                   ..+..   
T Consensus       205 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~  284 (383)
T 3eb0_A          205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAK  284 (383)
T ss_dssp             SSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCC
T ss_pred             CCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcc
Confidence            359999998775 4899999999999999999999999988765544443210                   00000   


Q ss_pred             -----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          58 -----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        58 -----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                           .+...+..+.+++.+||..||.+||++.|+++||||+...
T Consensus       285 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          285 DWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             CHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred             cHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence                 1112467789999999999999999999999999998654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.85  E-value=5.3e-22  Score=117.09  Aligned_cols=98  Identities=21%  Similarity=0.197  Sum_probs=79.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||.+....+....+.........  ....+..+.+++.+||..||.
T Consensus       176 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  255 (283)
T 3bhy_A          176 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPK  255 (283)
T ss_dssp             GGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGG
T ss_pred             CccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHh
Confidence            599999999888999999999999999999999999988776665555443322211  123467889999999999999


Q ss_pred             CCCCHHHHhcCccccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~~   99 (108)
                      +||++.++++|+||+.....
T Consensus       256 ~Rps~~~~l~h~~~~~~~~~  275 (283)
T 3bhy_A          256 RRMTIAQSLEHSWIKAIRRR  275 (283)
T ss_dssp             GSCCHHHHHHCHHHHHHHHC
T ss_pred             HCcCHHHHHhCHHHHHHHHH
Confidence            99999999999999876443

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.85  E-value=2.4e-21  Score=115.89  Aligned_cols=91  Identities=23%  Similarity=0.190  Sum_probs=69.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+ .++.++||||+|++++++++|..++........   +.....+.......+..+.+++.+||..||.+
T Consensus       220 ~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  295 (311)
T 3p1a_A          220 PRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ---LRQGYLPPEFTAGLSSELRSVLVMMLEPDPKL  295 (311)
T ss_dssp             GGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH---HTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred             ccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH---HhccCCCcccccCCCHHHHHHHHHHcCCChhh
Confidence            36999999876 688999999999999999999766655433222   22222211111245788999999999999999


Q ss_pred             CCCHHHHhcCccccc
Q psy2811          81 RPFAKELLRHPLLKK   95 (108)
Q Consensus        81 R~~~~~~l~~~~~~~   95 (108)
                      ||++.++++||||+.
T Consensus       296 Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          296 RATAEALLALPVLRQ  310 (311)
T ss_dssp             SCCHHHHHTSGGGSC
T ss_pred             CcCHHHHHhCccccC
Confidence            999999999999975

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.85  E-value=6e-21  Score=115.80  Aligned_cols=97  Identities=25%  Similarity=0.331  Sum_probs=74.0

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---------------------------C
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---------------------------N   52 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---------------------------~   52 (108)
                      +.|+|||.+.+ ..++.++|+||+|++++++++|..||.+.+..+.+..+..                           .
T Consensus       187 ~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (353)
T 3coi_A          187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT  266 (353)
T ss_dssp             BCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBC
T ss_pred             cCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCC
Confidence            35999999877 6788899999999999999999999988765443322211                           0


Q ss_pred             CCCCC--CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          53 PPPQL--TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        53 ~~~~~--~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .....  .....+..+.+++.+||..||.+||++.++++||||+...
T Consensus       267 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          267 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             SSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             CCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence            00000  0113477899999999999999999999999999998653

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.85  E-value=2.9e-22  Score=122.72  Aligned_cols=95  Identities=26%  Similarity=0.328  Sum_probs=69.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHh---hccCCCCC----------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP------MRALF---QIPRNPPP----------------   55 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~------~~~~~---~~~~~~~~----------------   55 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|..||.....      .....   .+....+.                
T Consensus       257 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  336 (397)
T 1wak_A          257 RQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKK  336 (397)
T ss_dssp             GGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTT
T ss_pred             CcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCc
Confidence            369999999999999999999999999999999999975431      11111   11000000                


Q ss_pred             ----CC-----------------CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          56 ----QL-----------------TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        56 ----~~-----------------~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                          ..                 .....+..+.+|+.+||..||++||++.++++||||++
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          337 GDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             SSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             cccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence                00                 00011356789999999999999999999999999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.85  E-value=1.3e-21  Score=119.47  Aligned_cols=96  Identities=26%  Similarity=0.268  Sum_probs=73.9

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C--------------------CCC
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P--------------------PPQ   56 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~--------------------~~~   56 (108)
                      +.|+|||++.+ ..++.++|+||+|++++++++|..||.+.+..+.+..+...   +                    ...
T Consensus       193 ~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~  272 (367)
T 2fst_X          193 RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM  272 (367)
T ss_dssp             CTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCC
T ss_pred             cCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCC
Confidence            36999999877 67888999999999999999999999987765544332110   0                    000


Q ss_pred             CC------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          57 LT------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        57 ~~------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      ..      ....+..+.+|+.+||..||.+||++.++++||||+..
T Consensus       273 ~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          273 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             CCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence            00      01235678899999999999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.85  E-value=1.6e-21  Score=115.37  Aligned_cols=95  Identities=25%  Similarity=0.295  Sum_probs=76.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||.+.+. ++.++|+||+|++++++++|..||.+.+..+....+..+......  ....+..+.+++.+||..+|.
T Consensus       188 ~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  266 (287)
T 2wei_A          188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPS  266 (287)
T ss_dssp             TTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGG
T ss_pred             cccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChh
Confidence            59999988754 788999999999999999999999988776665555444332211  123477899999999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +||++.++++||||+...
T Consensus       267 ~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          267 LRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             GSCCHHHHHHSHHHHHHC
T ss_pred             hCcCHHHHhcCHHHhccc
Confidence            999999999999998653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.85  E-value=7.1e-22  Score=118.99  Aligned_cols=96  Identities=24%  Similarity=0.421  Sum_probs=73.3

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---------------------CCCCCC
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---------------------PPPQLT   58 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---------------------~~~~~~   58 (108)
                      +.|+|||.+.+. .++.++|+||+|++++++++|..||.+....+....+...                     ..+...
T Consensus       188 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (331)
T 4aaa_A          188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIK  267 (331)
T ss_dssp             CTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCS
T ss_pred             ccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCcccc
Confidence            359999998775 6788999999999999999999999887655433222110                     000000


Q ss_pred             --------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          59 --------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        59 --------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                              ....+..+.+++.+||..||.+||++.++++||||+..
T Consensus       268 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          268 EREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             SCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             ccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence                    01236788999999999999999999999999999865

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.85  E-value=1.4e-21  Score=120.49  Aligned_cols=96  Identities=20%  Similarity=0.208  Sum_probs=68.9

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---------HHHhhc---cCCCCCC-CC--------
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPM---------RALFQI---PRNPPPQ-LT--------   58 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---------~~~~~~---~~~~~~~-~~--------   58 (108)
                      +.|+|||++.+. .++.++||||+|+++|++++|..||.+....         +.+.++   ...+... ..        
T Consensus       199 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~  278 (405)
T 3rgf_A          199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH  278 (405)
T ss_dssp             CTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTH
T ss_pred             CcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcch
Confidence            359999999874 4888999999999999999999999765321         111111   0000000 00        


Q ss_pred             ------------------------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          59 ------------------------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        59 ------------------------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                              ....+..+.+|+.+||..||.+|||+.|+++||||+..
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~  340 (405)
T 3rgf_A          279 STLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED  340 (405)
T ss_dssp             HHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred             hhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence                                    00114567899999999999999999999999999764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.85  E-value=3.8e-21  Score=114.12  Aligned_cols=96  Identities=25%  Similarity=0.268  Sum_probs=76.6

Q ss_pred             ccccccccc------cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQL------DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~------~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~   73 (108)
                      .|+|||.+.      ...++.++|+||+|++++++++|..||...........+..........  ...+..+.+++.+|
T Consensus       188 ~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  267 (298)
T 1phk_A          188 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRF  267 (298)
T ss_dssp             GGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHH
T ss_pred             cccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHH
Confidence            699999985      4557889999999999999999999998877665555444433322211  23467899999999


Q ss_pred             hhcCCCCCCCHHHHhcCccccccc
Q psy2811          74 LRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      |..||.+||++.++++|+||+...
T Consensus       268 l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          268 LVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             CCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             ccCCcccCCCHHHHHhChHhhhcc
Confidence            999999999999999999998654

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.84  E-value=9e-22  Score=121.77  Aligned_cols=94  Identities=16%  Similarity=0.092  Sum_probs=74.8

Q ss_pred             Ccccccccc----------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHH
Q psy2811           1 MSVIACEQQ----------LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFV   70 (108)
Q Consensus         1 ~~y~ape~~----------~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   70 (108)
                      +.|+|||++          .+..++.++||||+|+++|++++|..||...+.......+....      ...+..+.+++
T Consensus       271 ~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~------~~~~~~~~~li  344 (413)
T 3dzo_A          271 RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSC------KNIPQPVRALL  344 (413)
T ss_dssp             TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSSC------CCCCHHHHHHH
T ss_pred             CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhhc------ccCCHHHHHHH
Confidence            479999999          45557889999999999999999999998765443333332211      13467899999


Q ss_pred             HHHhhcCCCCCCCHHHHhcCcccccccccc
Q psy2811          71 NECLRKDLEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        71 ~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      .+||..||.+||++.++++|+||+......
T Consensus       345 ~~~l~~dP~~Rpt~~~~l~~~~~~~~~~~~  374 (413)
T 3dzo_A          345 EGFLRYPKEDRLLPLQAMETPEYEQLRTEL  374 (413)
T ss_dssp             HHHTCSSGGGSCCHHHHTTSHHHHHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHhCHHHHHHHHHH
Confidence            999999999999999999999998765443

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.84  E-value=3.5e-21  Score=122.49  Aligned_cols=94  Identities=23%  Similarity=0.228  Sum_probs=75.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC----HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH----PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||.+..    .......+.......+  ...+..+.+++++||..
T Consensus       353 ~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~  430 (543)
T 3c4z_A          353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP--DKFSPASKDFCEALLQK  430 (543)
T ss_dssp             TTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCS
T ss_pred             ccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC--cccCHHHHHHHHHhccC
Confidence            47999999999999999999999999999999999997753    2333444433333222  24578899999999999


Q ss_pred             CCCCCCC-----HHHHhcCcccccc
Q psy2811          77 DLEERPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        77 ~p~~R~~-----~~~~l~~~~~~~~   96 (108)
                      ||.+|++     +.++++||||++.
T Consensus       431 dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          431 DPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             SGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             CHhHCCCCcccCHHHHHcCccccCC
Confidence            9999996     4889999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.84  E-value=5.1e-22  Score=120.96  Aligned_cols=98  Identities=24%  Similarity=0.263  Sum_probs=69.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH------HHHHhhc---cCCCCC----------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP------MRALFQI---PRNPPP----------------   55 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~------~~~~~~~---~~~~~~----------------   55 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.....      ......+   ....+.                
T Consensus       199 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  278 (373)
T 1q8y_A          199 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSR  278 (373)
T ss_dssp             GGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC-
T ss_pred             ccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCc
Confidence            369999999999999999999999999999999999976431      1111111   000000                


Q ss_pred             ---------------------CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          56 ---------------------QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        56 ---------------------~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                                           .......+..+.+|+.+||..||.+||++.++++||||++...
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  342 (373)
T 1q8y_A          279 GLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG  342 (373)
T ss_dssp             -CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred             chhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence                                 0000112467889999999999999999999999999987643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.84  E-value=4.9e-21  Score=115.70  Aligned_cols=89  Identities=20%  Similarity=0.295  Sum_probs=71.2

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..+ +.++|+||+|+++|++++|..||.....      .......  .+...+.++.+++.+||..||.
T Consensus       193 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~--~~~~~~~~l~~li~~~L~~dP~  264 (335)
T 3dls_A          193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEAAIH--PPYLVSKELMSLVSGLLQPVPE  264 (335)
T ss_dssp             GGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTTCCC--CSSCCCHHHHHHHHHHTCSSGG
T ss_pred             ccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhhccC--CCcccCHHHHHHHHHHccCChh
Confidence            36999999988777 6789999999999999999999976321      1111111  1224578899999999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +||++.++++||||+...
T Consensus       265 ~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          265 RRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             GSCCHHHHHHCTTTTCCC
T ss_pred             hCcCHHHHhcCccccCCc
Confidence            999999999999997643

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.84  E-value=5.4e-21  Score=118.92  Aligned_cols=96  Identities=21%  Similarity=0.243  Sum_probs=69.6

Q ss_pred             Cccccccccc---cCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHhh
Q psy2811           1 MSVIACEQQL---DMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECLR   75 (108)
Q Consensus         1 ~~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~   75 (108)
                      +.|+|||++.   +..++.++||||+|++++++++ |..||...........+......... ....+..+.+++.+||.
T Consensus       190 ~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  269 (432)
T 3p23_A          190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIA  269 (432)
T ss_dssp             TTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSC
T ss_pred             cCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHh
Confidence            4699999987   3556778999999999999999 89998665433322222222221111 11224567899999999


Q ss_pred             cCCCCCCCHHHHhcCcccccc
Q psy2811          76 KDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        76 ~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      .||.+||++.++++||||...
T Consensus       270 ~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          270 MDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             SSGGGSCCHHHHHTSTTTCCH
T ss_pred             CCHhhCCCHHHHHhCccccCh
Confidence            999999999999999999764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.84  E-value=2.5e-21  Score=119.97  Aligned_cols=98  Identities=26%  Similarity=0.299  Sum_probs=73.3

Q ss_pred             Ccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHhhccCCCCCCCCC--cCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLD---MSYDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIPRNPPPQLTK--RFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~---~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+   ..++.++|+||+|++++++++|..||...... .....+..........  ...+..+.+++.+||
T Consensus       305 ~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  384 (419)
T 3i6u_A          305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL  384 (419)
T ss_dssp             CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHS
T ss_pred             CCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHc
Confidence            46999999853   56778999999999999999999999765332 1222222222222111  134778999999999


Q ss_pred             hcCCCCCCCHHHHhcCcccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      ..||.+||++.++++||||++...
T Consensus       385 ~~dP~~Rps~~e~l~hp~~~~~~~  408 (419)
T 3i6u_A          385 VVDPKARFTTEEALRHPWLQDEDM  408 (419)
T ss_dssp             CSSTTTSCCHHHHHHSGGGCCHHH
T ss_pred             cCChhHCcCHHHHhCCcccCChhH
Confidence            999999999999999999986543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.84  E-value=3.1e-21  Score=113.77  Aligned_cols=94  Identities=19%  Similarity=0.293  Sum_probs=69.3

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+. .++.++|+||+|++++++++|.+++........   +.....+..+ ...+..+.+++.+||..||.
T Consensus       194 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~li~~~l~~dp~  269 (289)
T 1x8b_A          194 SRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE---IRQGRLPRIP-QVLSQEFTELLKVMIHPDPE  269 (289)
T ss_dssp             GGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH---HHTTCCCCCS-SCCCHHHHHHHHHHTCSSGG
T ss_pred             ccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH---HHcCCCCCCC-cccCHHHHHHHHHHhCCCcc
Confidence            369999998765 556799999999999999999877655443322   2222222222 24578899999999999999


Q ss_pred             CCCCHHHHhcCcccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~   98 (108)
                      +||++.++++|+||++...
T Consensus       270 ~Rps~~~ll~h~~~~~~~~  288 (289)
T 1x8b_A          270 RRPSAMALVKHSVLLSASR  288 (289)
T ss_dssp             GSCCHHHHHTCTTC-----
T ss_pred             cCCCHHHHhhChHhhhhcc
Confidence            9999999999999987643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.84  E-value=9.7e-22  Score=118.76  Aligned_cols=99  Identities=22%  Similarity=0.256  Sum_probs=60.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH----HhhccCCCC--CCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRA----LFQIPRNPP--PQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||........    ...+.....  +.......+..+.+++.+||
T Consensus       193 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  272 (336)
T 3fhr_A          193 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLL  272 (336)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHS
T ss_pred             cCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHC
Confidence            469999999888889999999999999999999999976543322    111111111  11111245788999999999


Q ss_pred             hcCCCCCCCHHHHhcCccccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGAQL   99 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~~~   99 (108)
                      ..||.+||++.++++||||+.....
T Consensus       273 ~~dP~~Rpt~~ell~hp~~~~~~~~  297 (336)
T 3fhr_A          273 KTDPTERLTITQFMNHPWINQSMVV  297 (336)
T ss_dssp             CSSGGGSCCHHHHHHSHHHHTGGGS
T ss_pred             CCChhHCcCHHHHhcCccccccccC
Confidence            9999999999999999999875433

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.84  E-value=3.5e-21  Score=123.07  Aligned_cols=94  Identities=24%  Similarity=0.266  Sum_probs=75.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC----HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH----PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||++.+..++.++|+||+|+++|+|++|..||.+..    .......+........  ...+.++.+++++||..
T Consensus       349 ~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p--~~~s~~~~dLI~~lL~~  426 (576)
T 2acx_A          349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS--ERFSPQARSLCSQLLCK  426 (576)
T ss_dssp             GGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCS
T ss_pred             ccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC--ccCCHHHHHHHHHhccC
Confidence            46999999999889999999999999999999999998753    2223333332222221  24578899999999999


Q ss_pred             CCCCCC-----CHHHHhcCcccccc
Q psy2811          77 DLEERP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        77 ~p~~R~-----~~~~~l~~~~~~~~   96 (108)
                      ||.+|+     ++.++++||||++.
T Consensus       427 dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          427 DPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             SGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             CHHHcCCCCCCCHHHHHhChhhccC
Confidence            999999     78999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.84  E-value=1.5e-20  Score=115.53  Aligned_cols=94  Identities=18%  Similarity=0.209  Sum_probs=73.0

Q ss_pred             Ccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCC---HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLD---MSYDARCDIWSLGITAIELAEGDPPLSDLH---PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~---~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+   ..++.++|+||+|+++|++++|..||....   .......+.......+  ...+..+.+++.+||
T Consensus       178 ~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p--~~~s~~~~~li~~lL  255 (384)
T 4fr4_A          178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP--SAWSQEMVSLLKKLL  255 (384)
T ss_dssp             GGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHS
T ss_pred             ccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC--CcCCHHHHHHHHHHh
Confidence            36999999864   458889999999999999999999997542   2333333333322222  245788999999999


Q ss_pred             hcCCCCCCC-HHHHhcCcccccc
Q psy2811          75 RKDLEERPF-AKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~~R~~-~~~~l~~~~~~~~   96 (108)
                      ..||.+|++ +.++++|+||++.
T Consensus       256 ~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          256 EPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             CSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             cCCHhHhcccHHHHHcChhhhcC
Confidence            999999998 9999999999865

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.84  E-value=1.1e-21  Score=122.16  Aligned_cols=96  Identities=18%  Similarity=0.200  Sum_probs=76.5

Q ss_pred             Cccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCCC-CcCCcHHHHHHHHH
Q psy2811           1 MSVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQLT-KRFDCVLLCDFVNE   72 (108)
Q Consensus         1 ~~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~l~~~   72 (108)
                      +.|+|||++.     +..++.++|+||+|+++|+|++|..||.+.+..+...++....  ...+. ....+.++.+|+++
T Consensus       240 ~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~  319 (437)
T 4aw2_A          240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRR  319 (437)
T ss_dssp             GGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHT
T ss_pred             cCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHH
Confidence            4699999987     4568889999999999999999999999988777666654321  11111 12357889999999


Q ss_pred             HhhcCCCC--CCCHHHHhcCcccccc
Q psy2811          73 CLRKDLEE--RPFAKELLRHPLLKKG   96 (108)
Q Consensus        73 ~l~~~p~~--R~~~~~~l~~~~~~~~   96 (108)
                      ||..+|+.  |++++++++||||++.
T Consensus       320 lL~~~~~r~~r~~~~eil~Hpff~~i  345 (437)
T 4aw2_A          320 LICSREHRLGQNGIEDFKKHPFFSGI  345 (437)
T ss_dssp             TSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred             HhcccccccCCCCHHHHhCCCccCCC
Confidence            99887777  9999999999999865

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.84  E-value=1.6e-21  Score=116.48  Aligned_cols=96  Identities=20%  Similarity=0.215  Sum_probs=74.3

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC------------------------C
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP------------------------Q   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~------------------------~   56 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||.+....+....+......                        .
T Consensus       189 ~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (320)
T 2i6l_A          189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPH  268 (320)
T ss_dssp             TTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCC
T ss_pred             cccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCC
Confidence            5999998865 66888999999999999999999999887765444333221100                        0


Q ss_pred             C----CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          57 L----TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        57 ~----~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .    .....+..+.+++.+||..||.+||++.++++||||+...
T Consensus       269 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          269 KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             CCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             CChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            0    0013467899999999999999999999999999998654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.83  E-value=1.5e-20  Score=116.92  Aligned_cols=96  Identities=23%  Similarity=0.219  Sum_probs=70.1

Q ss_pred             Ccccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHH-H-HhhccCCC-CCCCCCcCCcHHHHHH
Q psy2811           1 MSVIACEQQLD-------MSYDARCDIWSLGITAIELAE-GDPPLSDLHPMR-A-LFQIPRNP-PPQLTKRFDCVLLCDF   69 (108)
Q Consensus         1 ~~y~ape~~~~-------~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~l   69 (108)
                      +.|+|||++.+       ..++.++||||+|++++++++ |..||....... . ........ .........+.++.++
T Consensus       196 ~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l  275 (434)
T 2rio_A          196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDL  275 (434)
T ss_dssp             CTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHH
T ss_pred             CCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHH
Confidence            46999999876       567889999999999999998 899997653322 1 11111111 1111111124678999


Q ss_pred             HHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          70 VNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        70 ~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      +.+||..||.+||++.++++||||...
T Consensus       276 i~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          276 ISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             HHHHhhCChhhCCCHHHHHhCCccCCc
Confidence            999999999999999999999999754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.83  E-value=3.7e-21  Score=116.93  Aligned_cols=95  Identities=18%  Similarity=0.203  Sum_probs=73.1

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC-----------------------CCCCCC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR-----------------------NPPPQL   57 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~-----------------------~~~~~~   57 (108)
                      .|+|||++.+ ..++.++|+||+|++++++++|..||.+....+....+..                       ......
T Consensus       198 ~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (362)
T 3pg1_A          198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNV  277 (362)
T ss_dssp             GGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCC
T ss_pred             eecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccC
Confidence            5999999877 6788899999999999999999999988765443332211                       000000


Q ss_pred             C-------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          58 T-------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        58 ~-------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                      .       ....+..+.+++.+||..||.+||++.++++||||+..
T Consensus       278 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          278 PARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             CCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             ChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence            0       01235678899999999999999999999999999875

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.83  E-value=5.8e-21  Score=115.67  Aligned_cols=96  Identities=26%  Similarity=0.183  Sum_probs=72.5

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhcc---CCCC---------------------CC
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIP---RNPP---------------------PQ   56 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~---~~~~---------------------~~   56 (108)
                      .|+|||++.+ ..++.++|+||+|++++++++|..||.+.+..+....+.   ..+.                     ..
T Consensus       187 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (353)
T 2b9h_A          187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMY  266 (353)
T ss_dssp             GGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCC
T ss_pred             cccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCC
Confidence            4999998765 668889999999999999999999998876544332211   0000                     00


Q ss_pred             CC------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          57 LT------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        57 ~~------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ..      ....+..+.+++.+||..||++||++.++++||||+...
T Consensus       267 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          267 PAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             CCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            00      013467788999999999999999999999999998653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.83  E-value=5e-21  Score=113.42  Aligned_cols=98  Identities=30%  Similarity=0.460  Sum_probs=70.5

Q ss_pred             ccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHhhc-cCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           2 SVIACEQQLDMS--YDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQI-PRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         2 ~y~ape~~~~~~--~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      .|+|||.+.+..  ++.++|+||+|++++++++|..||...... ...... .....+.. +...+..+.+++.+||..|
T Consensus       188 ~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~d  266 (295)
T 2clq_A          188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI-PESMSAEAKAFILKCFEPD  266 (295)
T ss_dssp             GGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCC-CTTSCHHHHHHHHHTTCSS
T ss_pred             cccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccc-cccCCHHHHHHHHHHccCC
Confidence            599999987643  788999999999999999999999754322 111111 11111111 2245788999999999999


Q ss_pred             CCCCCCHHHHhcCcccccccccc
Q psy2811          78 LEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      |++||++.++++|+||+......
T Consensus       267 p~~Rps~~~ll~~~~~~~~~~~~  289 (295)
T 2clq_A          267 PDKRACANDLLVDEFLKVSSKKK  289 (295)
T ss_dssp             TTTSCCHHHHHTSGGGCC-----
T ss_pred             hhhCCCHHHHhcChhhhhccccC
Confidence            99999999999999998765443

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.83  E-value=2.5e-21  Score=119.83  Aligned_cols=95  Identities=22%  Similarity=0.209  Sum_probs=74.8

Q ss_pred             Cccccccccc-------cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCC--CCCC-CCcCCcHHHHHHH
Q psy2811           1 MSVIACEQQL-------DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNP--PPQL-TKRFDCVLLCDFV   70 (108)
Q Consensus         1 ~~y~ape~~~-------~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~l~   70 (108)
                      +.|+|||++.       ...++.++|+||+|+++|+|++|..||.+.+..+...++....  ...+ .....+.++++++
T Consensus       227 ~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli  306 (412)
T 2vd5_A          227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFI  306 (412)
T ss_dssp             GGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHH
T ss_pred             cCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHH
Confidence            4699999987       3568889999999999999999999999888776665554321  1111 1124578899999


Q ss_pred             HHHhhcCCCCC---CCHHHHhcCcccccc
Q psy2811          71 NECLRKDLEER---PFAKELLRHPLLKKG   96 (108)
Q Consensus        71 ~~~l~~~p~~R---~~~~~~l~~~~~~~~   96 (108)
                      ++||. +|.+|   ++++++++||||++.
T Consensus       307 ~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          307 QRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             HTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             HHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence            99999 99998   489999999999764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.83  E-value=3.7e-20  Score=115.69  Aligned_cols=96  Identities=22%  Similarity=0.202  Sum_probs=66.3

Q ss_pred             cccccccc-ccCCCCcchhHHHHHHHHHHHHh-----------CCCCCCCCCH--------------------HHHHhhc
Q psy2811           2 SVIACEQQ-LDMSYDARCDIWSLGITAIELAE-----------GDPPLSDLHP--------------------MRALFQI   49 (108)
Q Consensus         2 ~y~ape~~-~~~~~~~~~dv~s~g~~l~~~~~-----------g~~~~~~~~~--------------------~~~~~~~   49 (108)
                      .|+|||++ .+..++.++||||+|+++|+|++           |.++|.+...                    .+.+..+
T Consensus       248 ~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i  327 (458)
T 3rp9_A          248 WYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVI  327 (458)
T ss_dssp             TTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHH
T ss_pred             cccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHH
Confidence            59999986 45678999999999999999998           6666655321                    0111100


Q ss_pred             ---cCC------------------------CCCCC--CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          50 ---PRN------------------------PPPQL--TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        50 ---~~~------------------------~~~~~--~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                         ...                        .....  .....+.++.+|+.+||..||.+|+++.|+++||||+...
T Consensus       328 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          328 FNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             HHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence               000                        00000  0012367889999999999999999999999999998763

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.82  E-value=1.1e-20  Score=113.60  Aligned_cols=96  Identities=23%  Similarity=0.285  Sum_probs=70.3

Q ss_pred             cccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhc-------------cCCCC------------
Q psy2811           2 SVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQI-------------PRNPP------------   54 (108)
Q Consensus         2 ~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~-------------~~~~~------------   54 (108)
                      .|+|||.+.+ ..++.++|+||+|++++++++|..||... ...+.+..+             .....            
T Consensus       195 ~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (330)
T 3nsz_A          195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGR  274 (330)
T ss_dssp             GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCC
T ss_pred             cccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhh
Confidence            5899999877 66888999999999999999999998543 222211111             00000            


Q ss_pred             ----------CCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          55 ----------PQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        55 ----------~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                                ........+.++.+|+.+||..||.+||++.++++||||++..
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          275 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence                      0000112467899999999999999999999999999998764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.82  E-value=1.2e-20  Score=113.13  Aligned_cols=99  Identities=19%  Similarity=0.292  Sum_probs=73.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+....+....+......... ...+..+.+++.+||..||++
T Consensus       204 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~  282 (323)
T 3qup_A          204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP-PECMEEVYDLMYQCWSADPKQ  282 (323)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC-TTCCHHHHHHHHHTTCSSGGG
T ss_pred             cccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCC-CccCHHHHHHHHHHccCChhh
Confidence            5999999999999999999999999999999 99999988776666555444332222 245788999999999999999


Q ss_pred             CCC-------HHHHhcCcccccccccch
Q psy2811          81 RPF-------AKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        81 R~~-------~~~~l~~~~~~~~~~~~~  101 (108)
                      ||+       +++++.|+|+......+.
T Consensus       283 Rps~~~l~~~l~~~l~~~~~~~~~~~pl  310 (323)
T 3qup_A          283 RPSFTCLRMELENILGHLSVLSTSQDPL  310 (323)
T ss_dssp             SCCHHHHHHHHHHHHHC-----------
T ss_pred             CcCHHHHHHHHHHHHHHhhhcCCCCCCC
Confidence            999       777889999987655544

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.82  E-value=1.2e-20  Score=113.17  Aligned_cols=97  Identities=26%  Similarity=0.288  Sum_probs=72.2

Q ss_pred             Cccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHhhccCCCCCCCC--CcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPM-RALFQIPRNPPPQLT--KRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.   ...++.++|+||+|++++++++|..||...... .....+........+  ....+..+.+++.+||
T Consensus       180 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  259 (322)
T 2ycf_A          180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL  259 (322)
T ss_dssp             CTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHS
T ss_pred             cCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHc
Confidence            4699999974   456788999999999999999999999765322 111222222221111  1134678899999999


Q ss_pred             hcCCCCCCCHHHHhcCccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ..||.+||++.++++|+||+...
T Consensus       260 ~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          260 VVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             CSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             ccCHhhCCCHHHHhhCcCcCCHH
Confidence            99999999999999999998653

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.82  E-value=3.8e-20  Score=110.76  Aligned_cols=96  Identities=20%  Similarity=0.277  Sum_probs=75.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...+.......+.........+...+..+.+++.+||..+|.+
T Consensus       203 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  282 (309)
T 3p86_A          203 PEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWK  282 (309)
T ss_dssp             CTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             ccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhh
Confidence            46999999999999999999999999999999999999887766555443222222222356788999999999999999


Q ss_pred             CCCHHHHhc--Ccccccc
Q psy2811          81 RPFAKELLR--HPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~--~~~~~~~   96 (108)
                      ||++.++++  ..+++..
T Consensus       283 Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          283 RPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             SCCHHHHHHHHHHHHC--
T ss_pred             CcCHHHHHHHHHHHHHhC
Confidence            999999986  4566544

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.82  E-value=2.2e-20  Score=109.58  Aligned_cols=90  Identities=18%  Similarity=0.311  Sum_probs=74.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+.+.......+.........+...+..+.+++.+||..+|.+
T Consensus       178 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  257 (271)
T 3dtc_A          178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHS  257 (271)
T ss_dssp             GGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCccc
Confidence            36999999999889999999999999999999999999887665555444443333333355788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       258 Rps~~e~l~~  267 (271)
T 3dtc_A          258 RPSFTNILDQ  267 (271)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=6.5e-20  Score=111.53  Aligned_cols=94  Identities=26%  Similarity=0.306  Sum_probs=70.7

Q ss_pred             Ccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCC----HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPLSDLH----PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+  ..++.++|+||+|++++++++|..||....    .......+........  ...+..+.+++.+||
T Consensus       224 ~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L  301 (355)
T 1vzo_A          224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP--QEMSALAKDLIQRLL  301 (355)
T ss_dssp             CTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHT
T ss_pred             cCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCC--cccCHHHHHHHHHHh
Confidence            46999999986  346789999999999999999999997542    2222233322222222  245678899999999


Q ss_pred             hcCCCCCC-----CHHHHhcCcccccc
Q psy2811          75 RKDLEERP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~~R~-----~~~~~l~~~~~~~~   96 (108)
                      ..||.+||     ++.++++|+||+..
T Consensus       302 ~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          302 MKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             CSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             hhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence            99999999     99999999999864

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.81  E-value=1.6e-19  Score=112.31  Aligned_cols=97  Identities=23%  Similarity=0.144  Sum_probs=66.6

Q ss_pred             cccccccc-ccCCCCcchhHHHHHHHHHHHHhC-----------CCCCCCCCH-----------------HHHHhhc---
Q psy2811           2 SVIACEQQ-LDMSYDARCDIWSLGITAIELAEG-----------DPPLSDLHP-----------------MRALFQI---   49 (108)
Q Consensus         2 ~y~ape~~-~~~~~~~~~dv~s~g~~l~~~~~g-----------~~~~~~~~~-----------------~~~~~~~---   49 (108)
                      .|+|||++ .+..++.++|+||+|++++++++|           .++|.+.+.                 .+.+..+   
T Consensus       216 ~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~  295 (432)
T 3n9x_A          216 WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNI  295 (432)
T ss_dssp             TTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHH
T ss_pred             cccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHh
Confidence            59999986 456689999999999999999974           444433220                 0111000   


Q ss_pred             ---------------------cCCCCCCCC-----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          50 ---------------------PRNPPPQLT-----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        50 ---------------------~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                                           .........     ....+..+.+|+.+||..||.+||++.|+++||||+....
T Consensus       296 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          296 IGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             HCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             cCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence                                 000000000     0124678899999999999999999999999999987643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.81  E-value=3.1e-20  Score=113.37  Aligned_cols=92  Identities=15%  Similarity=0.199  Sum_probs=76.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|++++++++ |..||......+....+......... ...+..+.+++.+||..+|.+
T Consensus       251 ~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~~l~~dP~~  329 (367)
T 3l9p_A          251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP-KNCPGPVYRIMTQCWQHQPED  329 (367)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             cEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-ccCCHHHHHHHHHHcCCCHhH
Confidence            6999999999999999999999999999998 99999988877766665554433322 245778999999999999999


Q ss_pred             CCCHHHHhcCcccc
Q psy2811          81 RPFAKELLRHPLLK   94 (108)
Q Consensus        81 R~~~~~~l~~~~~~   94 (108)
                      ||++.+++++.+..
T Consensus       330 Rps~~eil~~l~~~  343 (367)
T 3l9p_A          330 RPNFAIILERIEYC  343 (367)
T ss_dssp             SCCHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHH
Confidence            99999999886553

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.81  E-value=6.3e-20  Score=107.45  Aligned_cols=89  Identities=18%  Similarity=0.256  Sum_probs=70.9

Q ss_pred             CccccccccccCCCCc---chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQLDMSYDA---RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~---~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      +.|+|||.+.+..++.   ++|+||+|++++++++|..||...........+.........+...+..+.+++.+||..|
T Consensus       172 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  251 (271)
T 3kmu_A          172 PAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNED  251 (271)
T ss_dssp             GGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             ccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            3699999998766554   7999999999999999999999887766554444333332233356788999999999999


Q ss_pred             CCCCCCHHHHhc
Q psy2811          78 LEERPFAKELLR   89 (108)
Q Consensus        78 p~~R~~~~~~l~   89 (108)
                      |.+||++.++++
T Consensus       252 p~~Rps~~~il~  263 (271)
T 3kmu_A          252 PAKRPKFDMIVP  263 (271)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             hhhCcCHHHHHH
Confidence            999999999984

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.80  E-value=5.9e-21  Score=114.58  Aligned_cols=92  Identities=21%  Similarity=0.252  Sum_probs=68.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..++...  ......+.....+... ...+..+.+++.+||..||.+
T Consensus       240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  316 (332)
T 3qd2_B          240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER--VRIITDVRNLKFPLLF-TQKYPQEHMMVQDMLSPSPTE  316 (332)
T ss_dssp             GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH--HHHHHHHHTTCCCHHH-HHHCHHHHHHHHHHHCSSGGG
T ss_pred             cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH--HHHHHHhhccCCCccc-ccCChhHHHHHHHHccCCCCc
Confidence            3599999999999999999999999999999986654221  1122222222221111 123567789999999999999


Q ss_pred             CCCHHHHhcCccccc
Q psy2811          81 RPFAKELLRHPLLKK   95 (108)
Q Consensus        81 R~~~~~~l~~~~~~~   95 (108)
                      ||++.++++|+||++
T Consensus       317 Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          317 RPEATDIIENAIFEN  331 (332)
T ss_dssp             SCCHHHHHHSTTCCC
T ss_pred             CCCHHHHhhchhhhc
Confidence            999999999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.80  E-value=3.2e-20  Score=111.44  Aligned_cols=89  Identities=19%  Similarity=0.239  Sum_probs=70.7

Q ss_pred             ccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..+ +.++|+||+|++++++++|..||.....  ...    ....  .....+..+.+++.+||..||.+
T Consensus       213 ~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~----~~~~--~~~~~~~~~~~li~~~l~~dp~~  284 (320)
T 3a99_A          213 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIR----GQVF--FRQRVSSECQHLIRWCLALRPSD  284 (320)
T ss_dssp             GGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHH----CCCC--CSSCCCHHHHHHHHHHTCSSGGG
T ss_pred             cCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hhc----cccc--ccccCCHHHHHHHHHHccCChhh
Confidence            5999999987776 5679999999999999999999976432  111    1111  11245778999999999999999


Q ss_pred             CCCHHHHhcCcccccccc
Q psy2811          81 RPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~~   98 (108)
                      ||++.++++|+||++...
T Consensus       285 Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          285 RPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             SCCHHHHHTSGGGSSCCC
T ss_pred             CcCHHHHhcCHhhcCccC
Confidence            999999999999987643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.80  E-value=1.4e-20  Score=112.47  Aligned_cols=96  Identities=27%  Similarity=0.318  Sum_probs=77.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC--CCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL--TKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+..................  .....+..+.+++.+||..||
T Consensus       183 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP  262 (311)
T 3ork_A          183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP  262 (311)
T ss_dssp             CTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSG
T ss_pred             cccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCH
Confidence            469999999999999999999999999999999999998876655444333322221  112357789999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+||+..++++|+|++..
T Consensus       263 ~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          263 ENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             GGSCSSHHHHHHHHHHHH
T ss_pred             hhChhhHHHHHHHHHHHh
Confidence            999999999999999754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.80  E-value=8e-20  Score=111.71  Aligned_cols=88  Identities=19%  Similarity=0.297  Sum_probs=72.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++|+||+|+++|++++ |..||.+....+....+........+ ...+..+.+++.+||..+|.+
T Consensus       270 ~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dP~~  348 (370)
T 2psq_A          270 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP-ANCTNELYMMMRDCWHAVPSQ  348 (370)
T ss_dssp             GGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC-TTSCHHHHHHHHHHTCSSGGG
T ss_pred             ceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHcCCChhh
Confidence            5999999999999999999999999999998 99999887766655555444332222 245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       349 Rpt~~ell~~  358 (370)
T 2psq_A          349 RPTFKQLVED  358 (370)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999853

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.80  E-value=1e-19  Score=106.74  Aligned_cols=88  Identities=23%  Similarity=0.352  Sum_probs=73.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...........+........+ ...+..+.+++.+||..+|.+
T Consensus       172 ~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~  250 (269)
T 4hcu_A          172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP-RLASTHVYQIMNHCWRERPED  250 (269)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC-TTSCHHHHHHHHHHTCSSGGG
T ss_pred             ccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCC-CcCCHHHHHHHHHHccCCccc
Confidence            5999999998999999999999999999999 99999988777666665554333222 245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       251 Rps~~~ll~~  260 (269)
T 4hcu_A          251 RPAFSRLLRQ  260 (269)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999865

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.80  E-value=3.1e-20  Score=112.70  Aligned_cols=89  Identities=19%  Similarity=0.360  Sum_probs=69.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|++++++++ |..||.+...................+...+.++.+++.+||..||.+
T Consensus       260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  339 (359)
T 3vhe_A          260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ  339 (359)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhh
Confidence            5999999999999999999999999999998 999998765333222222222222222346788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.++++|
T Consensus       340 Rps~~ell~~  349 (359)
T 3vhe_A          340 RPTFSELVEH  349 (359)
T ss_dssp             SCCHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            9999999865

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.79  E-value=1.1e-19  Score=109.18  Aligned_cols=92  Identities=15%  Similarity=0.199  Sum_probs=75.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...........+......... ...+..+.+++.+||..||.+
T Consensus       210 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~  288 (327)
T 2yfx_A          210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP-KNCPGPVYRIMTQCWQHQPED  288 (327)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             ceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHHhcCChhh
Confidence            5999999988889999999999999999998 99999887766655555444332222 245778999999999999999


Q ss_pred             CCCHHHHhcCcccc
Q psy2811          81 RPFAKELLRHPLLK   94 (108)
Q Consensus        81 R~~~~~~l~~~~~~   94 (108)
                      ||++.+++++.+..
T Consensus       289 Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          289 RPNFAIILERIEYC  302 (327)
T ss_dssp             SCCHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHH
Confidence            99999999987654

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.79  E-value=1.2e-19  Score=109.26  Aligned_cols=88  Identities=22%  Similarity=0.340  Sum_probs=71.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++||||+|++++++++ |..||.+.........+....... .+...+..+.+++.+||..+|.+
T Consensus       184 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~  262 (327)
T 3poz_A          184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP-QPPICTIDVYMIMVKCWMIDADS  262 (327)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC-CCTTBCHHHHHHHHHHTCSCGGG
T ss_pred             cccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCC-CCccCCHHHHHHHHHHcCCChhh
Confidence            6999999999999999999999999999999 999998876655444443333222 22245778999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       263 Rps~~ell~~  272 (327)
T 3poz_A          263 RPKFRELIIE  272 (327)
T ss_dssp             SCCHHHHHHH
T ss_pred             CCCHHHHHHH
Confidence            9999999854

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.79  E-value=7.1e-20  Score=110.62  Aligned_cols=90  Identities=19%  Similarity=0.268  Sum_probs=70.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.........+.........+...+..+.+++.+||..||.+
T Consensus       239 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  318 (344)
T 1rjb_A          239 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRK  318 (344)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             CccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchh
Confidence            5999999998889999999999999999998 999998765433333322222222222345788999999999999999


Q ss_pred             CCCHHHHhcCc
Q psy2811          81 RPFAKELLRHP   91 (108)
Q Consensus        81 R~~~~~~l~~~   91 (108)
                      ||++.+++++-
T Consensus       319 Rps~~~l~~~l  329 (344)
T 1rjb_A          319 RPSFPNLTSFL  329 (344)
T ss_dssp             SCCHHHHHHHH
T ss_pred             CcCHHHHHHHH
Confidence            99999998654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.79  E-value=1.8e-19  Score=106.37  Aligned_cols=88  Identities=18%  Similarity=0.246  Sum_probs=72.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+....+....+......... ...+..+.+++.+||..||.+
T Consensus       182 ~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  260 (281)
T 1mp8_A          182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP-PNCPPTLYSLMTKCWAYDPSR  260 (281)
T ss_dssp             GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHccCChhh
Confidence            5999999998899999999999999999996 99999887766655555444332222 245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       261 Rps~~~l~~~  270 (281)
T 1mp8_A          261 RPRFTELKAQ  270 (281)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999853

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.79  E-value=1.2e-19  Score=106.33  Aligned_cols=88  Identities=18%  Similarity=0.307  Sum_probs=73.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...........+........+ ...+..+.+++..||..+|.+
T Consensus       170 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  248 (268)
T 3sxs_A          170 KWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP-HLASDTIYQIMYSCWHELPEK  248 (268)
T ss_dssp             GGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC-TTSCHHHHHHHHHTTCSSGGG
T ss_pred             ccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC-CcChHHHHHHHHHHcCCChhh
Confidence            5999999998889999999999999999998 99999888776666555544433322 245778999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       249 Rps~~~ll~~  258 (268)
T 3sxs_A          249 RPTFQQLLSS  258 (268)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999865

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.79  E-value=2.8e-19  Score=106.80  Aligned_cols=89  Identities=24%  Similarity=0.327  Sum_probs=69.2

Q ss_pred             CccccccccccCCCCc-chhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDA-RCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~-~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..+.. ++|+||+|++++++++|..||.....  ...    .....  ....+..+.+++.+||..+|+
T Consensus       202 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~----~~~~~--~~~~~~~~~~li~~~l~~~p~  273 (312)
T 2iwi_A          202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--ILE----AELHF--PAHVSPDCCALIRRCLAPKPS  273 (312)
T ss_dssp             TTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHH----TCCCC--CTTSCHHHHHHHHHHTCSSTT
T ss_pred             ccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--Hhh----hccCC--cccCCHHHHHHHHHHccCChh
Confidence            3599999988777654 89999999999999999999976422  111    11111  124567889999999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +||++.++++|+||+...
T Consensus       274 ~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          274 SRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             TSCCHHHHHHSTTTCC--
T ss_pred             hCcCHHHHhcChhhcCch
Confidence            999999999999998654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.79  E-value=1.2e-19  Score=107.62  Aligned_cols=93  Identities=20%  Similarity=0.196  Sum_probs=67.2

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhccCCCCCC--CCCcCCcHHHHHHHHHHhhcC
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQ--LTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      .|+|||.+.+. .++.++|+||+|++++++++   ||... ........+.......  ......+..+.+++.+||..|
T Consensus       195 ~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d  271 (303)
T 1zy4_A          195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHD  271 (303)
T ss_dssp             TTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSS
T ss_pred             cccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcC
Confidence            59999998764 67889999999999999997   44332 2222233332222111  111234567889999999999


Q ss_pred             CCCCCCHHHHhcCccccccc
Q psy2811          78 LEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~~   97 (108)
                      |.+||++.++++||||+...
T Consensus       272 p~~Rps~~~ll~h~~~~~~~  291 (303)
T 1zy4_A          272 PNKRPGARTLLNSGWLPVKH  291 (303)
T ss_dssp             GGGSCCHHHHHHSSCSCCCC
T ss_pred             cccCcCHHHHhCCCCcCCCC
Confidence            99999999999999997653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.78  E-value=5.9e-20  Score=109.81  Aligned_cols=90  Identities=16%  Similarity=0.115  Sum_probs=60.4

Q ss_pred             CccccccccccC------CCCcchhHHHHHHHHHHHHhCCCCCCCCC---------------HHHHHhhccCCCCC-CCC
Q psy2811           1 MSVIACEQQLDM------SYDARCDIWSLGITAIELAEGDPPLSDLH---------------PMRALFQIPRNPPP-QLT   58 (108)
Q Consensus         1 ~~y~ape~~~~~------~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---------------~~~~~~~~~~~~~~-~~~   58 (108)
                      +.|||||++.+.      .++.++||||+|+++|++++|.+|+....               .......+...... ..+
T Consensus       176 ~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p  255 (303)
T 3hmm_A          176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP  255 (303)
T ss_dssp             GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             ccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCC
Confidence            469999998764      35678999999999999999976553211               11122222222211 111


Q ss_pred             CcC----CcHHHHHHHHHHhhcCCCCCCCHHHHhcC
Q psy2811          59 KRF----DCVLLCDFVNECLRKDLEERPFAKELLRH   90 (108)
Q Consensus        59 ~~~----~~~~~~~l~~~~l~~~p~~R~~~~~~l~~   90 (108)
                      ...    ....+.+++.+||..||++|||+.++++.
T Consensus       256 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            111    13467889999999999999999999853

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.78  E-value=1.9e-19  Score=106.19  Aligned_cols=88  Identities=18%  Similarity=0.304  Sum_probs=73.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...........+........+ ...+..+.+++.+||..+|.+
T Consensus       186 ~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  264 (283)
T 3gen_A          186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP-HLASEKVYTIMYSCWHEKADE  264 (283)
T ss_dssp             GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHTTCSSGGG
T ss_pred             ccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCC-CcCCHHHHHHHHHHccCChhH
Confidence            5999999998899999999999999999998 99999988776666555544333222 245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       265 Rps~~~ll~~  274 (283)
T 3gen_A          265 RPTFKILLSN  274 (283)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999865

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.78  E-value=1.5e-19  Score=106.88  Aligned_cols=88  Identities=19%  Similarity=0.249  Sum_probs=73.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.+.......+.............+..+.+++.+||..+|.+
T Consensus       189 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  268 (291)
T 1u46_A          189 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPED  268 (291)
T ss_dssp             GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             eeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCccc
Confidence            5999999988888999999999999999999 999999887776666655443333333355788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       269 Rps~~~l~~  277 (291)
T 1u46_A          269 RPTFVALRD  277 (291)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999985

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.78  E-value=3.3e-19  Score=107.40  Aligned_cols=87  Identities=22%  Similarity=0.346  Sum_probs=71.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|+++|++++ |..||.+.........+........ +...+..+.+++.+||..||.+
T Consensus       184 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~  262 (327)
T 3lzb_A          184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-PPICTIDVYMIMRKCWMIDADS  262 (327)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC-CTTBCHHHHHHHHHHTCSSGGG
T ss_pred             cccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-CccCCHHHHHHHHHHcCCChhH
Confidence            5999999999999999999999999999999 9999988776555444444332222 2246788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       263 Rps~~ell~  271 (327)
T 3lzb_A          263 RPKFRELII  271 (327)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999885

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.78  E-value=3.1e-19  Score=109.41  Aligned_cols=88  Identities=19%  Similarity=0.290  Sum_probs=73.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|++++++++ |..||.+....+....+......... ...+.++.+++.+||..+|++
T Consensus       258 ~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dP~~  336 (382)
T 3tt0_A          258 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP-SNCTNELYMMMRDCWHAVPSQ  336 (382)
T ss_dssp             GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC-SSCCHHHHHHHHHHTCSSGGG
T ss_pred             ceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-ccCCHHHHHHHHHHcCCChhh
Confidence            5999999999999999999999999999999 99999988776665555444333222 355788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       337 Rps~~ell~~  346 (382)
T 3tt0_A          337 RPTFKQLVED  346 (382)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999864

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.78  E-value=3.3e-19  Score=104.35  Aligned_cols=88  Identities=23%  Similarity=0.352  Sum_probs=72.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++|+||+|++++++++ |..||...........+........+ ...+..+.+++.+||..+|.+
T Consensus       170 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  248 (267)
T 3t9t_A          170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP-RLASTHVYQIMNHCWRERPED  248 (267)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC-TTSCHHHHHHHHHHTCSSGGG
T ss_pred             cccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCC-ccCcHHHHHHHHHHccCChhh
Confidence            5999999998889999999999999999999 89999888776666555544332222 245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       249 Rps~~~ll~~  258 (267)
T 3t9t_A          249 RPAFSRLLRQ  258 (267)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999853

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.78  E-value=2.1e-19  Score=110.04  Aligned_cols=87  Identities=17%  Similarity=0.242  Sum_probs=70.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++||||+|+++|++++ |..||.+.........+..+.... .+...+..+.+++..||..||.+
T Consensus       280 ~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~  358 (377)
T 3cbl_A          280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-CPELCPDAVFRLMEQCWAYEPGQ  358 (377)
T ss_dssp             GGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             CcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHcCCCchh
Confidence            5999999998889999999999999999998 999998877665554444333222 22245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       359 Rps~~~i~~  367 (377)
T 3cbl_A          359 RPSFSTIYQ  367 (377)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.78  E-value=3.1e-19  Score=111.57  Aligned_cols=87  Identities=21%  Similarity=0.267  Sum_probs=71.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|++++++++ |..||.+....+....+..+.... .+...+..+.+++.+||..||.+
T Consensus       350 ~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~  428 (454)
T 1qcf_A          350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP-RPENCPEELYNIMMRCWKNRPEE  428 (454)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCC-CCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             cccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHccCChhH
Confidence            5999999998899999999999999999999 999999887766655554432222 22345788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+++.
T Consensus       429 RPt~~~i~~  437 (454)
T 1qcf_A          429 RPTFEYIQS  437 (454)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.78  E-value=3.3e-19  Score=107.58  Aligned_cols=87  Identities=16%  Similarity=0.249  Sum_probs=72.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|+++|++++ |..||.+....+....+........+ ...+..+.+++.+||..||.+
T Consensus       241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  319 (343)
T 1luf_A          241 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACP-ENCPLELYNLMRLCWSKLPAD  319 (343)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             eecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCC-CCCCHHHHHHHHHHcccCccc
Confidence            5999999998889999999999999999998 99999988776666555554433322 245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       320 Rps~~~~~~  328 (343)
T 1luf_A          320 RPSFCSIHR  328 (343)
T ss_dssp             SCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            999999974

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.78  E-value=3.5e-19  Score=111.22  Aligned_cols=88  Identities=18%  Similarity=0.273  Sum_probs=71.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++||||+|+++|++++ |..||.+....+....+..+.... .+...+..+.+++..||..||.
T Consensus       350 ~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-~p~~~~~~l~~li~~cl~~dp~  428 (450)
T 1k9a_A          350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD-APDGCPPAVYDVMKNCWHLDAA  428 (450)
T ss_dssp             TTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGG
T ss_pred             cceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-CCCcCCHHHHHHHHHHcCCChh
Confidence            36999999999999999999999999999998 999998876655555554443222 2235678899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.++++
T Consensus       429 ~Rpt~~~l~~  438 (450)
T 1k9a_A          429 TRPTFLQLRE  438 (450)
T ss_dssp             GSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.78  E-value=1.8e-19  Score=108.32  Aligned_cols=88  Identities=23%  Similarity=0.280  Sum_probs=70.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|+++|++++ |..||.+.........+........+ ...+..+.+++.+||..||.+
T Consensus       182 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dp~~  260 (325)
T 3kex_A          182 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP-QICTIDVYMVMVKCWMIDENI  260 (325)
T ss_dssp             TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCC-TTBCTTTTHHHHHHTCSCTTT
T ss_pred             cccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCC-CcCcHHHHHHHHHHcCCChhh
Confidence            6999999998999999999999999999999 99999887655544444333222222 235667889999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       261 Rps~~el~~~  270 (325)
T 3kex_A          261 RPTFKELANE  270 (325)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999865

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.78  E-value=1.4e-19  Score=107.95  Aligned_cols=89  Identities=21%  Similarity=0.370  Sum_probs=69.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.......................+..+.+++.+||..||.+
T Consensus       212 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~  291 (313)
T 1t46_A          212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK  291 (313)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGG
T ss_pred             eeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchh
Confidence            5999999998899999999999999999998 999998765433332222222222222345788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       292 Rps~~ell~~  301 (313)
T 1t46_A          292 RPTFKQIVQL  301 (313)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999854

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.78  E-value=3.3e-19  Score=107.30  Aligned_cols=87  Identities=17%  Similarity=0.260  Sum_probs=72.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|++++++++ |..||...........+........ +...+..+.+++..||..||.+
T Consensus       219 ~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~  297 (325)
T 3kul_A          219 RWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLDCWHKDRAQ  297 (325)
T ss_dssp             GGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCC-CCCcCHHHHHHHHHHccCChhh
Confidence            5999999998899999999999999999998 9999988877766665554432222 2245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       298 Rps~~eil~  306 (325)
T 3kul_A          298 RPRFSQIVS  306 (325)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999984

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.78  E-value=1.4e-19  Score=108.15  Aligned_cols=88  Identities=19%  Similarity=0.385  Sum_probs=68.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-hhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRAL-FQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      .|+|||++.+..++.++|+||+|++++++++ |..||.+....... ..+....... .+...+..+.+++..||..+|.
T Consensus       215 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~  293 (316)
T 2xir_A          215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR-APDYTTPEMYQTMLDCWHGEPS  293 (316)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCC-CCTTCCHHHHHHHHHHTCSSGG
T ss_pred             eecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCC-CCCCCCHHHHHHHHHHcCCChh
Confidence            5999999999999999999999999999998 99999876532222 2222222211 2224578899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.++++|
T Consensus       294 ~Rps~~ell~~  304 (316)
T 2xir_A          294 QRPTFSELVEH  304 (316)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999875

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.78  E-value=2.6e-19  Score=105.56  Aligned_cols=88  Identities=16%  Similarity=0.231  Sum_probs=70.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+........ +...+..+.+++.+||..+|.+
T Consensus       179 ~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~  257 (281)
T 3cc6_A          179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSD  257 (281)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCC-CTTCCHHHHHHHHHHTCSSGGG
T ss_pred             ceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHHccCCchh
Confidence            5999999998899999999999999999998 9999987655544443333322222 2245778999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       258 Rps~~ell~~  267 (281)
T 3cc6_A          258 RPRFTELVCS  267 (281)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999854

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1.6e-19  Score=106.87  Aligned_cols=89  Identities=19%  Similarity=0.215  Sum_probs=72.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+........+ ...+..+.+++..||..+|.+
T Consensus       178 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  256 (287)
T 1u59_A          178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP-PECPPELYALMSDCWIYKWED  256 (287)
T ss_dssp             GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHTTCSSGGG
T ss_pred             cccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCC-CCcCHHHHHHHHHHcCCChhh
Confidence            5999999988889999999999999999998 99999887766555555444332222 245788999999999999999


Q ss_pred             CCCHHHHhcCc
Q psy2811          81 RPFAKELLRHP   91 (108)
Q Consensus        81 R~~~~~~l~~~   91 (108)
                      ||++.+++++.
T Consensus       257 Rps~~~l~~~l  267 (287)
T 1u59_A          257 RPDFLTVEQRM  267 (287)
T ss_dssp             SCCHHHHHHHH
T ss_pred             CcCHHHHHHHH
Confidence            99999998753

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.78  E-value=4.3e-19  Score=106.34  Aligned_cols=88  Identities=18%  Similarity=0.269  Sum_probs=72.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.........+......... ...+..+.+++.+||..+|.+
T Consensus       205 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~  283 (322)
T 1p4o_A          205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPKM  283 (322)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             CccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCC-CCCCHHHHHHHHHHcCCCccc
Confidence            5999999998889999999999999999999 89999888776665555444332222 245778999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       284 Rps~~e~l~~  293 (322)
T 1p4o_A          284 RPSFLEIISS  293 (322)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999865

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.78  E-value=2.5e-19  Score=106.94  Aligned_cols=88  Identities=18%  Similarity=0.392  Sum_probs=71.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.........+......... ...+..+.+++.+||..||.+
T Consensus       217 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dp~~  295 (314)
T 2ivs_A          217 KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP-DNCSEEMYRLMLQCWKQEPDK  295 (314)
T ss_dssp             GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCC-ccCCHHHHHHHHHHccCChhh
Confidence            5999999998889999999999999999999 99999887765555444443322222 245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       296 Rps~~~l~~~  305 (314)
T 2ivs_A          296 RPVFADISKD  305 (314)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999854

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.78  E-value=4e-19  Score=106.82  Aligned_cols=89  Identities=20%  Similarity=0.301  Sum_probs=73.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++ |..||.+.........+........ ....+..+.+++.+||..+|.
T Consensus       205 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~  283 (327)
T 1fvr_A          205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEK-PLNCDDEVYDLMRQCWREKPY  283 (327)
T ss_dssp             TTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCC-CTTBCHHHHHHHHHHTCSSGG
T ss_pred             ccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCC-CCCCCHHHHHHHHHHccCChh
Confidence            35999999988888999999999999999998 9999998877666665554432222 224578899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.+++++
T Consensus       284 ~Rps~~ell~~  294 (327)
T 1fvr_A          284 ERPSFAQILVS  294 (327)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.78  E-value=5.6e-19  Score=104.67  Aligned_cols=87  Identities=18%  Similarity=0.219  Sum_probs=71.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.........+......... ...+..+.+++.+||..||.+
T Consensus       185 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~  263 (291)
T 1xbb_A          185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP-AGCPREMYDLMNLCWTYDVEN  263 (291)
T ss_dssp             GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSTTT
T ss_pred             eeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcCCChhh
Confidence            5999999988888999999999999999998 99999988776655555444332222 245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       264 Rps~~~l~~  272 (291)
T 1xbb_A          264 RPGFAAVEL  272 (291)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.77  E-value=1.4e-19  Score=108.86  Aligned_cols=88  Identities=18%  Similarity=0.337  Sum_probs=69.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.........+.........+...+..+.+++..||..+|.+
T Consensus       231 ~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~  310 (333)
T 2i1m_A          231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTH  310 (333)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhh
Confidence            5999999998889999999999999999998 899998765433333332222222222345788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       311 Rps~~~l~~  319 (333)
T 2i1m_A          311 RPTFQQICS  319 (333)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999985

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.77  E-value=1.1e-18  Score=104.39  Aligned_cols=88  Identities=20%  Similarity=0.276  Sum_probs=70.9

Q ss_pred             cccccccccc---------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHH
Q psy2811           2 SVIACEQQLD---------MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNE   72 (108)
Q Consensus         2 ~y~ape~~~~---------~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   72 (108)
                      .|+|||.+.+         ..++.++|+||+|++++++++|..||...........+.....+.......+..+.+++.+
T Consensus       199 ~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  278 (319)
T 2y4i_B          199 CHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLF  278 (319)
T ss_dssp             GTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHH
T ss_pred             cccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHH
Confidence            5899999864         3467899999999999999999999998877666555554444333333456788999999


Q ss_pred             HhhcCCCCCCCHHHHhc
Q psy2811          73 CLRKDLEERPFAKELLR   89 (108)
Q Consensus        73 ~l~~~p~~R~~~~~~l~   89 (108)
                      ||..+|.+||++.++++
T Consensus       279 ~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          279 CWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHCSSTTTSCCHHHHHH
T ss_pred             HhcCChhhCcCHHHHHH
Confidence            99999999999999984

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.77  E-value=6.4e-19  Score=110.11  Aligned_cols=94  Identities=27%  Similarity=0.318  Sum_probs=75.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++||||+|++++++++ |..||.+....+....+..+..... +...+..+.+++.+||..+|++
T Consensus       346 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~  424 (452)
T 1fmk_A          346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEE  424 (452)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             cccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHccCChhh
Confidence            5999999998999999999999999999999 9999998877666655544432222 2245788999999999999999


Q ss_pred             CCCHHHHhc--Ccccccc
Q psy2811          81 RPFAKELLR--HPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~--~~~~~~~   96 (108)
                      ||++.++++  ..++...
T Consensus       425 Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          425 RPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             SCCHHHHHHHHHTTTSCS
T ss_pred             CcCHHHHHHHHHHHhccC
Confidence            999999875  3455443

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.77  E-value=9.4e-19  Score=103.06  Aligned_cols=88  Identities=17%  Similarity=0.252  Sum_probs=71.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++ |..||......+....+......... ...+..+.+++.+||..||.
T Consensus       178 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~  256 (278)
T 1byg_A          178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP-DGCPPAVYEVMKNCWHLDAA  256 (278)
T ss_dssp             TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCC-TTCCHHHHHHHHHHTCSSGG
T ss_pred             ccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCc-ccCCHHHHHHHHHHhcCChh
Confidence            36999999998889999999999999999998 99999887766555555444322222 24578899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.++++
T Consensus       257 ~Rps~~~l~~  266 (278)
T 1byg_A          257 MRPSFLQLRE  266 (278)
T ss_dssp             GSCCHHHHHH
T ss_pred             hCCCHHHHHH
Confidence            9999999874

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.77  E-value=7.2e-19  Score=113.35  Aligned_cols=87  Identities=20%  Similarity=0.232  Sum_probs=72.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..++.++||||+|+++|++++ |..||.+.+..+....+..+.....+ ...+.++.+++..||..+|.
T Consensus       503 ~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~dP~  581 (613)
T 2ozo_A          503 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP-PECPPELYALMSDCWIYKWE  581 (613)
T ss_dssp             CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHTTCSSTT
T ss_pred             cceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC-CcCCHHHHHHHHHHcCCChh
Confidence            36999999999999999999999999999998 99999988766666665554332222 24678899999999999999


Q ss_pred             CCCCHHHHh
Q psy2811          80 ERPFAKELL   88 (108)
Q Consensus        80 ~R~~~~~~l   88 (108)
                      +||++.+++
T Consensus       582 ~RPs~~~l~  590 (613)
T 2ozo_A          582 DRPDFLTVE  590 (613)
T ss_dssp             TSCCHHHHH
T ss_pred             HCcCHHHHH
Confidence            999999985

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.77  E-value=6.5e-19  Score=104.11  Aligned_cols=89  Identities=16%  Similarity=0.211  Sum_probs=66.4

Q ss_pred             Cccccccccc--cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQL--DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMR--ALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~--~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||.+.  ...++.++|+||+|++++++++|..||.......  ....+.........+...+..+.+++.+||..
T Consensus       190 ~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  269 (287)
T 4f0f_A          190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSG  269 (287)
T ss_dssp             CTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred             ccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcC
Confidence            4699999984  4456789999999999999999999997654322  12222222222222235578899999999999


Q ss_pred             CCCCCCCHHHHhc
Q psy2811          77 DLEERPFAKELLR   89 (108)
Q Consensus        77 ~p~~R~~~~~~l~   89 (108)
                      ||.+||++.++++
T Consensus       270 dp~~Rps~~~ll~  282 (287)
T 4f0f_A          270 DPKKRPHFSYIVK  282 (287)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.77  E-value=1.2e-18  Score=112.71  Aligned_cols=87  Identities=18%  Similarity=0.219  Sum_probs=73.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|++++++++ |..||.+....+....+..+.....+ ...+.++.+++..||..||.+
T Consensus       537 ~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~dP~~  615 (635)
T 4fl3_A          537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP-AGCPREMYDLMNLCWTYDVEN  615 (635)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSTTT
T ss_pred             eeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcCCCHhH
Confidence            5999999999999999999999999999998 99999998877666665554433222 246788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       616 RPs~~~l~~  624 (635)
T 4fl3_A          616 RPGFAAVEL  624 (635)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.77  E-value=2.1e-18  Score=104.07  Aligned_cols=88  Identities=17%  Similarity=0.244  Sum_probs=72.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||......+....+........ ....+..+.+++.+||..+|.+
T Consensus       215 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~  293 (333)
T 1mqb_A          215 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT-PMDCPSAIYQLMMQCWQQERAR  293 (333)
T ss_dssp             GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC-CTTCBHHHHHHHHHHTCSSTTT
T ss_pred             cccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCC-cccCCHHHHHHHHHHcCCChhh
Confidence            5999999998889999999999999999998 9999988777666555544422222 2245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       294 Rps~~~l~~~  303 (333)
T 1mqb_A          294 RPKFADIVSI  303 (333)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999998753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.76  E-value=4.5e-19  Score=108.54  Aligned_cols=88  Identities=22%  Similarity=0.373  Sum_probs=69.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|+++|++++ |.+||...+..+....+..+..... +...+..+.+++.+||..+|.+
T Consensus       261 ~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~-p~~~~~~l~~li~~cl~~dp~~  339 (373)
T 3c1x_A          261 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEM  339 (373)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCChhh
Confidence            5999999999999999999999999999999 7788877655444444433332222 2245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       340 RPs~~ell~~  349 (373)
T 3c1x_A          340 RPSFSELVSR  349 (373)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999853

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.76  E-value=6.9e-19  Score=105.16  Aligned_cols=88  Identities=23%  Similarity=0.312  Sum_probs=71.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+.........+......... ...+..+.+++.+||..+|.+
T Consensus       214 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~  292 (313)
T 3brb_A          214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQP-EDCLDELYEIMYSCWRTDPLD  292 (313)
T ss_dssp             GGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCB-TTCCHHHHHHHHHTTCSSGGG
T ss_pred             cccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCC-ccccHHHHHHHHHHcCCChhh
Confidence            5999999999889999999999999999999 88999887766555554444332222 245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       293 Rps~~~l~~~  302 (313)
T 3brb_A          293 RPTFSVLRLQ  302 (313)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999854

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.76  E-value=2.2e-18  Score=102.91  Aligned_cols=88  Identities=22%  Similarity=0.426  Sum_probs=68.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||....  .......+.....+... ...+..+.+++.+||..||
T Consensus       167 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp  245 (307)
T 2eva_A          167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI-KNLPKPIESLMTRCWSKDP  245 (307)
T ss_dssp             TTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCB-TTCCHHHHHHHHHHTCSSG
T ss_pred             CceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcc-cccCHHHHHHHHHHhcCCh
Confidence            46999999999899999999999999999999999997542  22222222222222222 2457789999999999999


Q ss_pred             CCCCCHHHHhc
Q psy2811          79 EERPFAKELLR   89 (108)
Q Consensus        79 ~~R~~~~~~l~   89 (108)
                      .+||++.++++
T Consensus       246 ~~Rps~~ell~  256 (307)
T 2eva_A          246 SQRPSMEEIVK  256 (307)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999985

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.76  E-value=6e-19  Score=106.35  Aligned_cols=88  Identities=19%  Similarity=0.297  Sum_probs=71.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++|+||+|++++++++ |..||.+....+....+......... ...+..+.+++.+||..+|.+
T Consensus       224 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~dp~~  302 (334)
T 2pvf_A          224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP-ANCTNELYMMMRDCWHAVPSQ  302 (334)
T ss_dssp             GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             ceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCC-ccCCHHHHHHHHHHccCChhh
Confidence            5999999988889999999999999999999 99999888766655444443322222 245788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.+++++
T Consensus       303 Rps~~ell~~  312 (334)
T 2pvf_A          303 RPTFKQLVED  312 (334)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999854

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.76  E-value=1.5e-18  Score=102.20  Aligned_cols=87  Identities=20%  Similarity=0.243  Sum_probs=71.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+....+....+........ ....+..+.+++.+||..+|++
T Consensus       175 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~  253 (279)
T 1qpc_A          175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR-PDNCPEELYQLMRLCWKERPED  253 (279)
T ss_dssp             TTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGG
T ss_pred             CccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCC-cccccHHHHHHHHHHhccChhh
Confidence            5999999988888999999999999999999 8999988877665555544432222 2245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       254 Rps~~~l~~  262 (279)
T 1qpc_A          254 RPTFDYLRS  262 (279)
T ss_dssp             SCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            999999875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.76  E-value=3.2e-18  Score=101.87  Aligned_cols=92  Identities=20%  Similarity=0.325  Sum_probs=64.2

Q ss_pred             ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC----CCCCCCCC--cCCcHHHHHHHHHHhhcCCCCCCC
Q psy2811          10 LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR----NPPPQLTK--RFDCVLLCDFVNECLRKDLEERPF   83 (108)
Q Consensus        10 ~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~l~~~~l~~~p~~R~~   83 (108)
                      .+..++.++|+||+|++++++++|..||...........+..    ........  ...+.++.+++.+||..||.+||+
T Consensus       171 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps  250 (299)
T 3m2w_A          171 TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT  250 (299)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCC
Confidence            345677899999999999999999999977654332221111    11111100  234778999999999999999999


Q ss_pred             HHHHhcCcccccccccch
Q psy2811          84 AKELLRHPLLKKGAQLAH  101 (108)
Q Consensus        84 ~~~~l~~~~~~~~~~~~~  101 (108)
                      +.++++||||+.......
T Consensus       251 ~~e~l~hp~~~~~~~~~~  268 (299)
T 3m2w_A          251 ITEFMNHPWIMQSTKVPQ  268 (299)
T ss_dssp             HHHHHTSHHHHTGGGSCC
T ss_pred             HHHHhcChhhcccccCCC
Confidence            999999999987654443

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.76  E-value=5.1e-19  Score=104.92  Aligned_cols=89  Identities=13%  Similarity=0.085  Sum_probs=66.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---HHHHHhhccCCC---CCCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH---PMRALFQIPRNP---PPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+..   .......+....   .........+..+.+++..||
T Consensus       182 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  261 (298)
T 1csn_A          182 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYAR  261 (298)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             cccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHh
Confidence            35999999999889999999999999999999999998743   222222221111   100011134678999999999


Q ss_pred             hcCCCCCCCHHHHhc
Q psy2811          75 RKDLEERPFAKELLR   89 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~   89 (108)
                      ..+|.+||++.++++
T Consensus       262 ~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          262 NLAFDATPDYDYLQG  276 (298)
T ss_dssp             HCCTTCCCCHHHHHH
T ss_pred             cCCcccCCCHHHHHH
Confidence            999999999999874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.76  E-value=1.3e-18  Score=106.54  Aligned_cols=87  Identities=17%  Similarity=0.270  Sum_probs=69.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++||||+|++++++++ |..||......+....+...... ......+..+.+++..||..+|.+
T Consensus       215 ~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~  293 (373)
T 2qol_A          215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-PPPMDCPAALYQLMLDCWQKDRNN  293 (373)
T ss_dssp             TTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC-CCCTTCBHHHHHHHHHHTCSSGGG
T ss_pred             CccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCccccHHHHHHHHHHhCcChhh
Confidence            5999999999999999999999999999987 99999887766655554433211 122245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       294 RPs~~~i~~  302 (373)
T 2qol_A          294 RPKFEQIVS  302 (373)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.75  E-value=1.1e-18  Score=110.20  Aligned_cols=87  Identities=15%  Similarity=0.236  Sum_probs=70.8

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|+++|++++ |..||.+.+.......+...... ..+...+..+.+++.+||..||.+
T Consensus       384 ~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~  462 (495)
T 1opk_A          384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD  462 (495)
T ss_dssp             GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             ceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCcChhH
Confidence            5999999998889999999999999999998 99999887765554444333222 222345788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       463 RPs~~el~~  471 (495)
T 1opk_A          463 RPSFAEIHQ  471 (495)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999974

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.75  E-value=2e-18  Score=102.03  Aligned_cols=87  Identities=15%  Similarity=0.253  Sum_probs=70.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||...+.......+....... .+...+..+.+++..||..||.+
T Consensus       177 ~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~dp~~  255 (288)
T 3kfa_A          177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME-RPEGCPEKVYELMRACWQWNPSD  255 (288)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             CcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCC-CCCCCCHHHHHHHHHHhCCChhh
Confidence            5999999998999999999999999999999 999998876655444443332222 22245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       256 Rps~~~~~~  264 (288)
T 3kfa_A          256 RPSFAEIHQ  264 (288)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999975

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.75  E-value=1.9e-18  Score=112.01  Aligned_cols=97  Identities=15%  Similarity=0.066  Sum_probs=69.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh--------------ccCCCC------CCC--C
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ--------------IPRNPP------PQL--T   58 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~--------------~~~~~~------~~~--~   58 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||...........              ...+..      +..  .
T Consensus       187 ~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l  266 (676)
T 3qa8_A          187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHL  266 (676)
T ss_dssp             CTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCC
T ss_pred             cccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhh
Confidence            469999999999999999999999999999999999976432211100              000100      000  0


Q ss_pred             CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          59 KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        59 ~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      ....+..+.+++.+||..||++||++.++++|+||+...
T Consensus       267 ~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~  305 (676)
T 3qa8_A          267 SGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALD  305 (676)
T ss_dssp             CGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHH
T ss_pred             chhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHH
Confidence            112357789999999999999999999999999997653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.75  E-value=2.2e-18  Score=109.60  Aligned_cols=94  Identities=27%  Similarity=0.320  Sum_probs=75.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|+++|++++ |..||.+....+....+..+.... .+...+..+.++|.+||..||++
T Consensus       429 ~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~  507 (535)
T 2h8h_A          429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-CPPECPESLHDLMCQCWRKEPEE  507 (535)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-CCCCCCHHHHHHHHHHcCCChhH
Confidence            5999999998899999999999999999999 899999887766665554443222 22245788999999999999999


Q ss_pred             CCCHHHHhcC--cccccc
Q psy2811          81 RPFAKELLRH--PLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~~--~~~~~~   96 (108)
                      ||++.+|++.  .++...
T Consensus       508 RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          508 RPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             SCCHHHHHHHHHTSSCCC
T ss_pred             CcCHHHHHHHHHHHhhcc
Confidence            9999998752  454433

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.75  E-value=4.4e-18  Score=101.55  Aligned_cols=89  Identities=25%  Similarity=0.313  Sum_probs=68.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--HHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--PMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+..  .......+.....+.......+..+.+++.+||..||
T Consensus       200 ~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp  279 (310)
T 2wqm_A          200 PYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP  279 (310)
T ss_dssp             CSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSG
T ss_pred             eeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCCh
Confidence            36999999998889999999999999999999999997642  2233333333333333323457889999999999999


Q ss_pred             CCCCCHHHHhc
Q psy2811          79 EERPFAKELLR   89 (108)
Q Consensus        79 ~~R~~~~~~l~   89 (108)
                      .+||++.++++
T Consensus       280 ~~Rps~~~il~  290 (310)
T 2wqm_A          280 EKRPDVTYVYD  290 (310)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCCCHHHHHH
Confidence            99999999985

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.75  E-value=2.2e-18  Score=102.33  Aligned_cols=87  Identities=22%  Similarity=0.378  Sum_probs=69.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |.+||...+..+....+........+ ...+..+.+++.+||..+|.+
T Consensus       197 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~~l~~~p~~  275 (298)
T 3f66_A          197 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP-EYCPDPLYEVMLKCWHPKAEM  275 (298)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC-ccCCHHHHHHHHHHcCCChhh
Confidence            5999999999999999999999999999999 66777766555444444443332222 245778999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       276 Rps~~ell~  284 (298)
T 3f66_A          276 RPSFSELVS  284 (298)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999985

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.75  E-value=9e-19  Score=103.77  Aligned_cols=89  Identities=16%  Similarity=0.169  Sum_probs=65.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHhhccCCCCCCC---CCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP---MRALFQIPRNPPPQL---TKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+...   ......+........   .....+..+.+++.+||
T Consensus       179 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  258 (296)
T 3uzp_A          179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR  258 (296)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             cccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHH
Confidence            369999999998899999999999999999999999976432   111111111110000   11234678999999999


Q ss_pred             hcCCCCCCCHHHHhc
Q psy2811          75 RKDLEERPFAKELLR   89 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~   89 (108)
                      ..||.+||++.++++
T Consensus       259 ~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          259 SLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             TSCTTCCCCHHHHHH
T ss_pred             hcCcCcCCCHHHHHH
Confidence            999999999999874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.75  E-value=8.9e-19  Score=105.00  Aligned_cols=92  Identities=21%  Similarity=0.273  Sum_probs=66.3

Q ss_pred             Cccccccccc--------cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHhhccCCCCCC------------
Q psy2811           1 MSVIACEQQL--------DMSYDARCDIWSLGITAIELAEGDPPLSDLHP----MRALFQIPRNPPPQ------------   56 (108)
Q Consensus         1 ~~y~ape~~~--------~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~------------   56 (108)
                      +.|+|||++.        +..++.++|+||+|++++++++|..||.....    .....++..+.+..            
T Consensus       179 ~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  258 (319)
T 4euu_A          179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP  258 (319)
T ss_dssp             GGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCC
T ss_pred             CCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCc
Confidence            3699999986        46788899999999999999999999964321    22222222221110            


Q ss_pred             -------CC----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcc
Q psy2811          57 -------LT----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPL   92 (108)
Q Consensus        57 -------~~----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~   92 (108)
                             ..    ....+..+.+++++||..||++|+++.|+++|+-
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             EEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             cccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence                   00    0112457889999999999999999999999874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.74  E-value=5.3e-18  Score=100.56  Aligned_cols=87  Identities=21%  Similarity=0.380  Sum_probs=68.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ +.+++...+.......+........ +...+..+.+++..||..+|.+
T Consensus       193 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~  271 (298)
T 3pls_A          193 KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQ-PEYCPDSLYQVMQQCWEADPAV  271 (298)
T ss_dssp             GGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCC-CccchHHHHHHHHHHccCChhh
Confidence            5999999999899999999999999999999 5566666555554444443332222 2245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       272 Rps~~~ll~  280 (298)
T 3pls_A          272 RPTFRVLVG  280 (298)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.74  E-value=2e-18  Score=103.77  Aligned_cols=86  Identities=17%  Similarity=0.188  Sum_probs=54.2

Q ss_pred             cccccccc---ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           2 SVIACEQQ---LDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         2 ~y~ape~~---~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      .|+|||++   .+..++.++||||+|++++++++|..||............    .........+..+.+++.+||..||
T Consensus       215 ~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~p  290 (337)
T 3ll6_A          215 MYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK----YSIPPHDTQYTVFHSLIRAMLQVNP  290 (337)
T ss_dssp             ---------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSG
T ss_pred             CcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc----ccCCcccccchHHHHHHHHHccCCh
Confidence            59999998   5666788999999999999999999999765543332221    1112222345678899999999999


Q ss_pred             CCCCCHHHHhcCc
Q psy2811          79 EERPFAKELLRHP   91 (108)
Q Consensus        79 ~~R~~~~~~l~~~   91 (108)
                      .+||++.+++++-
T Consensus       291 ~~Rps~~e~l~~l  303 (337)
T 3ll6_A          291 EERLSIAEVVHQL  303 (337)
T ss_dssp             GGSCCHHHHHHHH
T ss_pred             hhCcCHHHHHHHH
Confidence            9999999999764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.74  E-value=3.5e-18  Score=101.20  Aligned_cols=89  Identities=22%  Similarity=0.360  Sum_probs=66.0

Q ss_pred             Cccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh-ccCCCCCC---CCCcCCcHHHHHHHHHH
Q psy2811           1 MSVIACEQQL---DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ-IPRNPPPQ---LTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         1 ~~y~ape~~~---~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~l~~~~   73 (108)
                      +.|+|||.+.   +..++.++|+||+|++++++++|..||........... +.......   ......+..+.+++..|
T Consensus       186 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  265 (289)
T 3og7_A          186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAEC  265 (289)
T ss_dssp             CTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHH
T ss_pred             ccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHH
Confidence            4699999986   56678899999999999999999999987654333222 22211111   11124468899999999


Q ss_pred             hhcCCCCCCCHHHHhc
Q psy2811          74 LRKDLEERPFAKELLR   89 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~   89 (108)
                      |..+|.+||++.++++
T Consensus       266 l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          266 LKKKRDERPSFPRILA  281 (289)
T ss_dssp             TCSSGGGSCCHHHHHH
T ss_pred             ccCChhhCCCHHHHHH
Confidence            9999999999999884

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.74  E-value=2.5e-18  Score=101.83  Aligned_cols=89  Identities=16%  Similarity=0.173  Sum_probs=65.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHhhccCCCCCCC---CCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM---RALFQIPRNPPPQL---TKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||.+.+..++.++||||+|++++++++|..||.+....   .....+........   .....+..+.+++..||
T Consensus       179 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  258 (296)
T 4hgt_A          179 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR  258 (296)
T ss_dssp             GGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             ccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHH
Confidence            3699999999989999999999999999999999999764321   11111111110110   01134678999999999


Q ss_pred             hcCCCCCCCHHHHhc
Q psy2811          75 RKDLEERPFAKELLR   89 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~   89 (108)
                      ..+|++||++.++++
T Consensus       259 ~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          259 SLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             TSCTTCCCCHHHHHH
T ss_pred             hcCCCCCCCHHHHHH
Confidence            999999999999874

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.74  E-value=8.1e-19  Score=106.27  Aligned_cols=89  Identities=15%  Similarity=0.254  Sum_probs=64.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC--CHHHHH---hhccCCCCCC----CCCcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL--HPMRAL---FQIPRNPPPQ----LTKRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~--~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||...  +.....   .......+..    ......+.++.+++.
T Consensus       224 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  303 (345)
T 2v62_A          224 IEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLV  303 (345)
T ss_dssp             TTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHH
T ss_pred             ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHH
Confidence            4699999999988999999999999999999999999652  221111   1111111100    011135678999999


Q ss_pred             HHhhcCCCCCCCHHHHhc
Q psy2811          72 ECLRKDLEERPFAKELLR   89 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~   89 (108)
                      .||..||.+||++.++++
T Consensus       304 ~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          304 CAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHTCCTTCCCCHHHHHH
T ss_pred             HHhhcCcccCCCHHHHHH
Confidence            999999999999999874

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.73  E-value=5.1e-18  Score=100.84  Aligned_cols=93  Identities=19%  Similarity=0.265  Sum_probs=70.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC---CCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL---TKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~l~~~   77 (108)
                      +.|+|||.+.+..++.++|+||+|+++|++++|..||.+........+......+..   .....+..+.+++.+||..|
T Consensus       176 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~d  255 (294)
T 4eqm_A          176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKD  255 (294)
T ss_dssp             CSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSS
T ss_pred             ccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCC
Confidence            469999999999999999999999999999999999998876555444333332221   11234778999999999999


Q ss_pred             CCCCCCHHHHhcCccc
Q psy2811          78 LEERPFAKELLRHPLL   93 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~   93 (108)
                      |.+||+..+.+.+.|.
T Consensus       256 p~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          256 KANRYKTIQEMKDDLS  271 (294)
T ss_dssp             GGGSCSSHHHHHHHHH
T ss_pred             HhHccccHHHHHHHHH
Confidence            9999954445544444

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.73  E-value=4.5e-18  Score=110.41  Aligned_cols=87  Identities=18%  Similarity=0.244  Sum_probs=72.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++ |..||.+....+....+........+ ...+..+.+++.+||..||.+
T Consensus       557 ~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~~l~~dP~~  635 (656)
T 2j0j_A          557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP-PNCPPTLYSLMTKCWAYDPSR  635 (656)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGGG
T ss_pred             ceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCC-ccccHHHHHHHHHHcCCChhH
Confidence            6999999998899999999999999999996 99999988777666655544333222 245788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       636 RPs~~el~~  644 (656)
T 2j0j_A          636 RPRFTELKA  644 (656)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999874

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.73  E-value=1.9e-18  Score=102.14  Aligned_cols=87  Identities=24%  Similarity=0.393  Sum_probs=64.5

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||.+.+ ..++.++|+||+|++++++++| .+++.............. .....  ...+.++.+++.+||..||
T Consensus       181 ~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~l~~li~~~l~~dp  257 (289)
T 4fvq_A          181 IPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED-RHQLP--APKAAELANLINNCMDYEP  257 (289)
T ss_dssp             TTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT-TCCCC--CCSSCTTHHHHHHHSCSSG
T ss_pred             CcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc-cCCCC--CCCCHHHHHHHHHHcCCCh
Confidence            36999999987 6688899999999999999995 566655554433322222 11111  1335678899999999999


Q ss_pred             CCCCCHHHHhcC
Q psy2811          79 EERPFAKELLRH   90 (108)
Q Consensus        79 ~~R~~~~~~l~~   90 (108)
                      .+||++.+++++
T Consensus       258 ~~Rps~~~ll~~  269 (289)
T 4fvq_A          258 DHRPSFRAIIRD  269 (289)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.73  E-value=7.7e-18  Score=102.20  Aligned_cols=89  Identities=17%  Similarity=0.179  Sum_probs=66.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--HHHHH---hhccCCCCCCCC----CcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--PMRAL---FQIPRNPPPQLT----KRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--~~~~~---~~~~~~~~~~~~----~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||....  .....   ..+.........    ....+..+.+++.
T Consensus       232 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  311 (352)
T 2jii_A          232 LEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLK  311 (352)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHH
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHH
Confidence            46999999999889999999999999999999999997653  22111   111111111111    0123688999999


Q ss_pred             HHhhcCCCCCCCHHHHhc
Q psy2811          72 ECLRKDLEERPFAKELLR   89 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~   89 (108)
                      +||..||.+||++.++++
T Consensus       312 ~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          312 VVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HHHTCCTTCCCCHHHHHH
T ss_pred             HHHhCChhhCCCHHHHHH
Confidence            999999999999999874

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.73  E-value=1.3e-18  Score=104.34  Aligned_cols=91  Identities=15%  Similarity=0.193  Sum_probs=65.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------hhccCC--------CCCCCCCcCCcHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRAL-------FQIPRN--------PPPQLTKRFDCVL   65 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~-------~~~~~~--------~~~~~~~~~~~~~   65 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||.+....+..       ......        ..........+..
T Consensus       205 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (321)
T 2qkw_B          205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK  284 (321)
T ss_dssp             TTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHH
T ss_pred             ccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHH
Confidence            4699999999889999999999999999999999998754321100       000000        0000111122567


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHhcCc
Q psy2811          66 LCDFVNECLRKDLEERPFAKELLRHP   91 (108)
Q Consensus        66 ~~~l~~~~l~~~p~~R~~~~~~l~~~   91 (108)
                      +.+++.+||..||++||++.+++++-
T Consensus       285 l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          285 FGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            88999999999999999999998653

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.72  E-value=1e-18  Score=104.93  Aligned_cols=92  Identities=17%  Similarity=0.165  Sum_probs=64.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHhhccCCC---------CCCCCCcCCc
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH--------PMRALFQIPRNP---------PPQLTKRFDC   63 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~--------~~~~~~~~~~~~---------~~~~~~~~~~   63 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..||....        ..+.........         .........+
T Consensus       199 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (326)
T 3uim_A          199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV  278 (326)
T ss_dssp             GGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHH
T ss_pred             cCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHH
Confidence            36999999988889999999999999999999999995211        111111111110         0000001124


Q ss_pred             HHHHHHHHHHhhcCCCCCCCHHHHhcCcc
Q psy2811          64 VLLCDFVNECLRKDLEERPFAKELLRHPL   92 (108)
Q Consensus        64 ~~~~~l~~~~l~~~p~~R~~~~~~l~~~~   92 (108)
                      ..+.+++.+||..||.+||++.+++++-.
T Consensus       279 ~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          279 EQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            67889999999999999999999997654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.72  E-value=1.2e-17  Score=99.88  Aligned_cols=88  Identities=19%  Similarity=0.141  Sum_probs=64.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCC-CCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQ-LTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||.+.........+....... ......+..+.+++.+||..||.+
T Consensus       200 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  279 (309)
T 2h34_A          200 YYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPED  279 (309)
T ss_dssp             GGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGG
T ss_pred             CccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHH
Confidence            5999999998889999999999999999999999998876543333332222111 112234678999999999999999


Q ss_pred             CC-CHHHHhc
Q psy2811          81 RP-FAKELLR   89 (108)
Q Consensus        81 R~-~~~~~l~   89 (108)
                      || +++++++
T Consensus       280 Rp~s~~~l~~  289 (309)
T 2h34_A          280 RYVTCGDLSA  289 (309)
T ss_dssp             SCSSHHHHHH
T ss_pred             HHHhHHHHHH
Confidence            99 7888774

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.71  E-value=9.9e-18  Score=99.43  Aligned_cols=87  Identities=16%  Similarity=0.157  Sum_probs=65.4

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHhhccCCCCCCCCCcCCcHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM----------------RALFQIPRNPPPQLTKRFDCVL   65 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~   65 (108)
                      .|+|||.+.+..++.++||||+|++++++++|..|+......                .....+.... ....+...+.+
T Consensus       182 ~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  260 (295)
T 3ugc_A          182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDE  260 (295)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC-CCCCCTTCCHH
T ss_pred             ceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccC-cCCCCcCcCHH
Confidence            399999999999999999999999999999998887543211                1111111121 12222345788


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHhc
Q psy2811          66 LCDFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        66 ~~~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +.+++..||..||.+||++.++++
T Consensus       261 l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          261 IYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999999874

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.71  E-value=1.8e-18  Score=105.43  Aligned_cols=89  Identities=15%  Similarity=0.140  Sum_probs=64.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh-c---cCCCC-----CCCCCcCCcHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ-I---PRNPP-----PQLTKRFDCVLLCDFVN   71 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~-~---~~~~~-----~~~~~~~~~~~~~~l~~   71 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|..||.+......... .   .....     ........+.++.+++.
T Consensus       225 ~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  304 (364)
T 3op5_A          225 IEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYME  304 (364)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHH
T ss_pred             CCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHH
Confidence            469999999998899999999999999999999999985321111000 0   00000     00111244678999999


Q ss_pred             HHhhcCCCCCCCHHHHhc
Q psy2811          72 ECLRKDLEERPFAKELLR   89 (108)
Q Consensus        72 ~~l~~~p~~R~~~~~~l~   89 (108)
                      .||..+|.+||++.++++
T Consensus       305 ~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          305 TVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHTCCTTCCCCHHHHHH
T ss_pred             HHhcCCCCCCCCHHHHHH
Confidence            999999999999998874

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.71  E-value=6.4e-18  Score=101.73  Aligned_cols=88  Identities=16%  Similarity=0.118  Sum_probs=65.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC---HHHHHhhccCCCCCCCC---CcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLH---PMRALFQIPRNPPPQLT---KRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+..   ..+....+.........   ....+ ++.+++..||
T Consensus       181 ~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l  259 (330)
T 2izr_A          181 ARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVR  259 (330)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHH
T ss_pred             ccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHH
Confidence            46999999999999999999999999999999999998743   22333332211111110   11123 8899999999


Q ss_pred             hcCCCCCCCHHHHhc
Q psy2811          75 RKDLEERPFAKELLR   89 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~   89 (108)
                      ..+|.+||++.++.+
T Consensus       260 ~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          260 RLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HCCTTCCCCHHHHHH
T ss_pred             hCCCCCCCCHHHHHH
Confidence            999999999988874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.71  E-value=5.1e-18  Score=101.95  Aligned_cols=89  Identities=18%  Similarity=0.171  Sum_probs=61.1

Q ss_pred             CccccccccccC-----CCCcchhHHHHHHHHHHHHhCCCCCCCCCH----------------HHHHhhccCCCCCCCCC
Q psy2811           1 MSVIACEQQLDM-----SYDARCDIWSLGITAIELAEGDPPLSDLHP----------------MRALFQIPRNPPPQLTK   59 (108)
Q Consensus         1 ~~y~ape~~~~~-----~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~----------------~~~~~~~~~~~~~~~~~   59 (108)
                      +.|+|||++.+.     .++.++||||+|+++|++++|..||.+...                ......+..........
T Consensus       197 ~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (322)
T 3soc_A          197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLR  276 (322)
T ss_dssp             GGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             ccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCcc
Confidence            369999998763     445678999999999999999999865321                11111111111111111


Q ss_pred             c-----CCcHHHHHHHHHHhhcCCCCCCCHHHHhc
Q psy2811          60 R-----FDCVLLCDFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        60 ~-----~~~~~~~~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      .     .....+.+++.+||..||++||++.++++
T Consensus       277 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          277 DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            0     11345889999999999999999999984

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.70  E-value=3.5e-18  Score=102.74  Aligned_cols=88  Identities=17%  Similarity=0.145  Sum_probs=66.0

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---------------HHHhhccCCCCCCCCCcCCcHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM---------------RALFQIPRNPPPQLTKRFDCVLL   66 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~   66 (108)
                      .|+|||++.+..++.++|+||+|++++++++|..||......               .....+.... ........+..+
T Consensus       195 ~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l  273 (327)
T 3lxl_A          195 FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ-RLPAPPACPAEV  273 (327)
T ss_dssp             GGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTC-CCCCCTTCCHHH
T ss_pred             cccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhccc-CCCCCCcccHHH
Confidence            499999999888999999999999999999999888543221               1111122221 122223457889


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHhcC
Q psy2811          67 CDFVNECLRKDLEERPFAKELLRH   90 (108)
Q Consensus        67 ~~l~~~~l~~~p~~R~~~~~~l~~   90 (108)
                      .+++.+||..||.+||++.+++++
T Consensus       274 ~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          274 HELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999753

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.69  E-value=1.5e-17  Score=98.03  Aligned_cols=91  Identities=19%  Similarity=0.194  Sum_probs=69.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||.+.+..++.++|+||+|++++++++|..++....  .....+.....    ....+..+.+++.+||..||.+
T Consensus       185 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~  258 (284)
T 2a19_B          185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS--KFFTDLRDGII----SDIFDKKEKTLLQKLLSKKPED  258 (284)
T ss_dssp             CTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH--HHHHHHHTTCC----CTTSCHHHHHHHHHHTCSSGGG
T ss_pred             ccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH--HHHHHhhcccc----cccCCHHHHHHHHHHccCChhh
Confidence            46999999999889999999999999999999987764321  12222222211    1235678899999999999999


Q ss_pred             CCCHHHHhcCccccccc
Q psy2811          81 RPFAKELLRHPLLKKGA   97 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~~   97 (108)
                      ||++.+++++.+.-...
T Consensus       259 Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          259 RPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             SCCHHHHHHHHHHHTC-
T ss_pred             CcCHHHHHHHHHHHhhC
Confidence            99999999987665443

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.69  E-value=7e-18  Score=100.90  Aligned_cols=88  Identities=23%  Similarity=0.265  Sum_probs=63.1

Q ss_pred             ccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           2 SVIACEQQLDMS---YDARCDIWSLGITAIELAEGDPPLSDLHPM--RALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         2 ~y~ape~~~~~~---~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      .|+|||.+.+..   ++.++|+||+|++++++++|..||......  .....+.. ..........+..+.+++.+||..
T Consensus       208 ~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~  286 (317)
T 2buj_A          208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN-QLSIPQSPRHSSALWQLLNSMMTV  286 (317)
T ss_dssp             GGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC-C--CCCCTTSCHHHHHHHHHHTCS
T ss_pred             ccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc-cCCCCccccCCHHHHHHHHHHhhc
Confidence            599999987554   678999999999999999999998532110  01111111 111112224577899999999999


Q ss_pred             CCCCCCCHHHHhcC
Q psy2811          77 DLEERPFAKELLRH   90 (108)
Q Consensus        77 ~p~~R~~~~~~l~~   90 (108)
                      ||.+||++.+++++
T Consensus       287 dp~~Rps~~~ll~~  300 (317)
T 2buj_A          287 DPHQRPHIPLLLSQ  300 (317)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCCCHHHHHHH
Confidence            99999999999865

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.69  E-value=2.5e-17  Score=97.79  Aligned_cols=89  Identities=21%  Similarity=0.373  Sum_probs=61.4

Q ss_pred             CccccccccccC------CCCcchhHHHHHHHHHHHHhC----------CCCCCCCCH----HHHHhh-ccCC-CCCCCC
Q psy2811           1 MSVIACEQQLDM------SYDARCDIWSLGITAIELAEG----------DPPLSDLHP----MRALFQ-IPRN-PPPQLT   58 (108)
Q Consensus         1 ~~y~ape~~~~~------~~~~~~dv~s~g~~l~~~~~g----------~~~~~~~~~----~~~~~~-~~~~-~~~~~~   58 (108)
                      +.|+|||++.+.      .++.++||||+|+++|++++|          ..||.....    ...... +... ..+..+
T Consensus       181 ~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (301)
T 3q4u_A          181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIP  260 (301)
T ss_dssp             GGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             cceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCC
Confidence            369999999876      344689999999999999999          778754321    111111 1111 111111


Q ss_pred             C----cCCcHHHHHHHHHHhhcCCCCCCCHHHHhc
Q psy2811          59 K----RFDCVLLCDFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        59 ~----~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      .    ...+..+.+++.+||..||++||++.++++
T Consensus       261 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          261 NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            1    112467889999999999999999999874

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.68  E-value=5.3e-18  Score=101.25  Aligned_cols=88  Identities=23%  Similarity=0.193  Sum_probs=63.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhcc-CCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIP-RNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|++++++++|..|+............. ........+...+..+.+++.+||..||++
T Consensus       187 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  266 (310)
T 3s95_A          187 YWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEK  266 (310)
T ss_dssp             GGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGG
T ss_pred             ceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhh
Confidence            4999999999999999999999999999999998876532211000000 000000011234567889999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       267 Rps~~~l~~  275 (310)
T 3s95_A          267 RPSFVKLEH  275 (310)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999985

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.67  E-value=1.8e-17  Score=99.35  Aligned_cols=88  Identities=16%  Similarity=0.147  Sum_probs=65.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--------------HHHhhccCCCCCCCCCcCCcHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM--------------RALFQIPRNPPPQLTKRFDCVLLC   67 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~   67 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..||......              ...................+..+.
T Consensus       202 ~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  281 (318)
T 3lxp_A          202 FWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVY  281 (318)
T ss_dssp             GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             eeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHH
Confidence            499999999888899999999999999999999998653211              011111111112222234578899


Q ss_pred             HHHHHHhhcCCCCCCCHHHHhc
Q psy2811          68 DFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +++++||..||.+||++.++++
T Consensus       282 ~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          282 HLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCcccCcCHHHHHH
Confidence            9999999999999999999983

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.67  E-value=3.5e-17  Score=97.24  Aligned_cols=87  Identities=15%  Similarity=0.112  Sum_probs=64.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC--------------CHHH-HHhhccCCCCCCCCCcCCcHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL--------------HPMR-ALFQIPRNPPPQLTKRFDCVLL   66 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~~~~~   66 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..|+...              .... ....+.... ....+...+..+
T Consensus       194 ~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l  272 (302)
T 4e5w_A          194 FWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK-RLPCPPNCPDEV  272 (302)
T ss_dssp             GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTC-CCCCCTTCCHHH
T ss_pred             cccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccC-CCCCCCCCCHHH
Confidence            399999999988999999999999999999998775322              1111 112222222 222222457889


Q ss_pred             HHHHHHHhhcCCCCCCCHHHHhc
Q psy2811          67 CDFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        67 ~~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      .+++.+||..||.+||++.++++
T Consensus       273 ~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          273 YQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHH
Confidence            99999999999999999999874

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=1.1e-16  Score=96.23  Aligned_cols=90  Identities=17%  Similarity=0.173  Sum_probs=61.4

Q ss_pred             CccccccccccCCCCcc------hhHHHHHHHHHHHHhC----------CCCCCCCCH-----HHHHhhccCCCC-CCCC
Q psy2811           1 MSVIACEQQLDMSYDAR------CDIWSLGITAIELAEG----------DPPLSDLHP-----MRALFQIPRNPP-PQLT   58 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~------~dv~s~g~~l~~~~~g----------~~~~~~~~~-----~~~~~~~~~~~~-~~~~   58 (108)
                      +.|+|||++.+......      +||||+|+++|++++|          ..||.....     ......+..... +..+
T Consensus       210 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (337)
T 3mdy_A          210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFP  289 (337)
T ss_dssp             GGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             cceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCcccc
Confidence            36999999987766654      9999999999999999          666654311     111111111111 1111


Q ss_pred             C----cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcC
Q psy2811          59 K----RFDCVLLCDFVNECLRKDLEERPFAKELLRH   90 (108)
Q Consensus        59 ~----~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~   90 (108)
                      .    ...+..+.+++.+||..||.+||++.+++++
T Consensus       290 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          290 NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            1    1224668899999999999999999999864

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.67  E-value=4.5e-17  Score=102.63  Aligned_cols=89  Identities=17%  Similarity=0.203  Sum_probs=65.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHhhccCCCCCC---CCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP---MRALFQIPRNPPPQ---LTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||.+.+..++.++||||+|+++|++++|..||.+...   ...+..+.......   ......+.++.+++..||
T Consensus       177 ~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl  256 (483)
T 3sv0_A          177 ARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCR  256 (483)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHH
T ss_pred             ccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHh
Confidence            369999999999999999999999999999999999987532   22222221111000   000134678999999999


Q ss_pred             hcCCCCCCCHHHHhc
Q psy2811          75 RKDLEERPFAKELLR   89 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~   89 (108)
                      ..+|.+||++.+|++
T Consensus       257 ~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          257 SLRFDDKPDYSYLKR  271 (483)
T ss_dssp             TCCTTCCCCHHHHHH
T ss_pred             cCChhhCcCHHHHHH
Confidence            999999999988764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.66  E-value=2e-17  Score=98.53  Aligned_cols=87  Identities=18%  Similarity=0.319  Sum_probs=61.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH----hhccC----------CCCCCCCCcCCcHHHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRAL----FQIPR----------NPPPQLTKRFDCVLLC   67 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~----~~~~~----------~~~~~~~~~~~~~~~~   67 (108)
                      .|+|||.+.+ .++.++|+||+|++++++++|..||.........    ..+..          ..... .....+..+.
T Consensus       200 ~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~  277 (307)
T 2nru_A          200 AYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND-ADSTSVEAMY  277 (307)
T ss_dssp             GGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSC-CCHHHHHHHH
T ss_pred             CcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccc-cchHHHHHHH
Confidence            6999998865 4788999999999999999999999765432111    11111          00100 1112246788


Q ss_pred             HHHHHHhhcCCCCCCCHHHHhcC
Q psy2811          68 DFVNECLRKDLEERPFAKELLRH   90 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l~~   90 (108)
                      +++.+||..+|.+||++.+++++
T Consensus       278 ~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          278 SVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHcCCCcccCcCHHHHHHH
Confidence            99999999999999999999853

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.65  E-value=4.4e-17  Score=98.12  Aligned_cols=98  Identities=16%  Similarity=0.133  Sum_probs=60.8

Q ss_pred             cccccccccc-------CCCCcchhHHHHHHHHHHHHhCCCCCC-CCCH-----------------HHHHhhccCCC-CC
Q psy2811           2 SVIACEQQLD-------MSYDARCDIWSLGITAIELAEGDPPLS-DLHP-----------------MRALFQIPRNP-PP   55 (108)
Q Consensus         2 ~y~ape~~~~-------~~~~~~~dv~s~g~~l~~~~~g~~~~~-~~~~-----------------~~~~~~~~~~~-~~   55 (108)
                      .|+|||++.+       ..++.++||||+|+++|++++|..|+. +...                 ......+.... .+
T Consensus       193 ~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (336)
T 3g2f_A          193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRP  272 (336)
T ss_dssp             GGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCC
T ss_pred             ceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCC
Confidence            6999999876       345668999999999999999865542 2110                 00000011111 11


Q ss_pred             CCCC-----cCCcHHHHHHHHHHhhcCCCCCCCHHHHh------cCccccccccc
Q psy2811          56 QLTK-----RFDCVLLCDFVNECLRKDLEERPFAKELL------RHPLLKKGAQL   99 (108)
Q Consensus        56 ~~~~-----~~~~~~~~~l~~~~l~~~p~~R~~~~~~l------~~~~~~~~~~~   99 (108)
                      ..+.     ...+..+.+++.+||..||++||++.+++      .++|-++....
T Consensus       273 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~~~  327 (336)
T 3g2f_A          273 KFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVS  327 (336)
T ss_dssp             CCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-----
T ss_pred             CCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcccCC
Confidence            1111     01245789999999999999999999995      45676655443

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.65  E-value=7.9e-17  Score=97.15  Aligned_cols=89  Identities=18%  Similarity=0.157  Sum_probs=61.3

Q ss_pred             ccccccccccCC------CCcchhHHHHHHHHHHHHhC----------CCCCCCCC-----HHHHHhhccCCCCC-CCCC
Q psy2811           2 SVIACEQQLDMS------YDARCDIWSLGITAIELAEG----------DPPLSDLH-----PMRALFQIPRNPPP-QLTK   59 (108)
Q Consensus         2 ~y~ape~~~~~~------~~~~~dv~s~g~~l~~~~~g----------~~~~~~~~-----~~~~~~~~~~~~~~-~~~~   59 (108)
                      .|+|||++.+..      ++.++|+||+|+++|++++|          ..||....     .......+...... ..+.
T Consensus       216 ~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (342)
T 1b6c_B          216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPN  295 (342)
T ss_dssp             GGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG
T ss_pred             ccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcc
Confidence            699999987652      23579999999999999998          67776542     12222222222111 1111


Q ss_pred             ----cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcC
Q psy2811          60 ----RFDCVLLCDFVNECLRKDLEERPFAKELLRH   90 (108)
Q Consensus        60 ----~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~   90 (108)
                          ......+.+++.+||..||.+||++.+++++
T Consensus       296 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          296 RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                1123568899999999999999999999865

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.65  E-value=5.6e-17  Score=97.49  Aligned_cols=87  Identities=16%  Similarity=0.157  Sum_probs=64.2

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH----------------HHHhhccCCCCCCCCCcCCcHH
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM----------------RALFQIPRNPPPQLTKRFDCVL   65 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~   65 (108)
                      .|+|||.+.+..++.++|+||+|++++++++|..|+......                .....+.... ....+...+..
T Consensus       213 ~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  291 (326)
T 2w1i_A          213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDE  291 (326)
T ss_dssp             GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC-CCCCCTTCCHH
T ss_pred             eEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCC-CCCCCCcccHH
Confidence            499999999888899999999999999999998887542110                0111111111 11122245788


Q ss_pred             HHHHHHHHhhcCCCCCCCHHHHhc
Q psy2811          66 LCDFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        66 ~~~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      +.+++.+||..+|.+||++.++++
T Consensus       292 l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          292 IYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999999884

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.61  E-value=1e-16  Score=98.71  Aligned_cols=89  Identities=21%  Similarity=0.279  Sum_probs=62.8

Q ss_pred             Ccccccccccc--------CCCCcchhHHHHHHHHHHHHhCCCCCCCCC----HHHHHhhccCCCCCCC-----------
Q psy2811           1 MSVIACEQQLD--------MSYDARCDIWSLGITAIELAEGDPPLSDLH----PMRALFQIPRNPPPQL-----------   57 (108)
Q Consensus         1 ~~y~ape~~~~--------~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~-----------   57 (108)
                      +.|+|||++.+        ..++.++|+||+|+++|++++|..||....    ..+...++..+.+...           
T Consensus       179 ~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  258 (396)
T 4eut_A          179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGP  258 (396)
T ss_dssp             CTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCC
T ss_pred             ccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCC
Confidence            46999999865        456778999999999999999999996422    2233333322221100           


Q ss_pred             -------C--C---cCCcHHHHHHHHHHhhcCCCCCCCHHHHhc
Q psy2811          58 -------T--K---RFDCVLLCDFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        58 -------~--~---~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                             +  .   ...+..+.+++.+||..||++|+++.++++
T Consensus       259 ~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          259 IDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             EEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             cccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence                   0  0   112456889999999999999999999854

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.53  E-value=3.4e-15  Score=90.99  Aligned_cols=81  Identities=9%  Similarity=-0.025  Sum_probs=59.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++||||+|+++|++++|..||.......  ..+. ..   ...........+++..|++.+|.+
T Consensus       249 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~~~~-~~---~~~~~~~~~~~~~~~~~l~~~p~~  322 (365)
T 3e7e_A          249 SGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--CKPE-GL---FRRLPHLDMWNEFFHVMLNIPDCH  322 (365)
T ss_dssp             TSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE--EEEC-SC---CTTCSSHHHHHHHHHHHHCCCCTT
T ss_pred             CCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc--eeec-hh---ccccCcHHHHHHHHHHHcCCCCCC
Confidence            46999999999999999999999999999999999986433211  1111 11   111134667889999999999999


Q ss_pred             CCCHHHH
Q psy2811          81 RPFAKEL   87 (108)
Q Consensus        81 R~~~~~~   87 (108)
                      |++..+.
T Consensus       323 r~~~~~~  329 (365)
T 3e7e_A          323 HLPSLDL  329 (365)
T ss_dssp             CCCCHHH
T ss_pred             cchHHHH
Confidence            9654333

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.50  E-value=3.6e-15  Score=97.23  Aligned_cols=85  Identities=15%  Similarity=0.040  Sum_probs=63.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+.. +.++||||+|++++++++|..++.+...        ............+..+.+++.+||..||.+
T Consensus       241 ~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~--------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~  311 (681)
T 2pzi_A          241 PGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV--------DGLPEDDPVLKTYDSYGRLLRRAIDPDPRQ  311 (681)
T ss_dssp             TTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC--------SSCCTTCHHHHHCHHHHHHHHHHTCSSGGG
T ss_pred             ccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc--------ccccccccccccCHHHHHHHhhhccCChhh
Confidence            4799999987654 7799999999999999999888765211        111111111112467889999999999999


Q ss_pred             CCCHHHHhcCcccc
Q psy2811          81 RPFAKELLRHPLLK   94 (108)
Q Consensus        81 R~~~~~~l~~~~~~   94 (108)
                      ||+..+.+.|+|+.
T Consensus       312 R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          312 RFTTAEEMSAQLTG  325 (681)
T ss_dssp             SCSSHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHH
Confidence            99988888887764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.47  E-value=7e-14  Score=82.91  Aligned_cols=76  Identities=18%  Similarity=0.132  Sum_probs=55.0

Q ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHh---hccCCCCCCC--CCcCCcHHHHHHHHHHhhcCCCCCCCHHHH
Q psy2811          13 SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALF---QIPRNPPPQL--TKRFDCVLLCDFVNECLRKDLEERPFAKEL   87 (108)
Q Consensus        13 ~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~   87 (108)
                      .++.++|+||+|+++|++++|..||.+.+....+.   +.........  .....+..+.+++.+||..||.+| ++.++
T Consensus       178 ~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el  256 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTL  256 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHH
Confidence            35778999999999999999999998765433221   1112211111  112357789999999999999999 99999


Q ss_pred             hc
Q psy2811          88 LR   89 (108)
Q Consensus        88 l~   89 (108)
                      ++
T Consensus       257 ~~  258 (286)
T 3uqc_A          257 LN  258 (286)
T ss_dssp             HH
T ss_pred             HH
Confidence            85

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.39  E-value=7.4e-14  Score=84.26  Aligned_cols=88  Identities=17%  Similarity=0.101  Sum_probs=59.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHH-HHHHHhCCCCCCCCC----HHHHHh-hccCCCCCCCC-CcCCcHHHHHHHHHH
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGIT-AIELAEGDPPLSDLH----PMRALF-QIPRNPPPQLT-KRFDCVLLCDFVNEC   73 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~-l~~~~~g~~~~~~~~----~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~~~   73 (108)
                      +.|+|||++.+.. +.++||||++.+ .+.+.+|..||....    ..+.+. .+......... ....+.++.+|+++|
T Consensus       241 ~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~  319 (336)
T 2vuw_A          241 DVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTM  319 (336)
T ss_dssp             CCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHG
T ss_pred             ecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHH
Confidence            4699999998766 889999998766 666778888875421    111111 11111111100 112367899999999


Q ss_pred             hhcCCCCCCCHHHHh-cCcccc
Q psy2811          74 LRKDLEERPFAKELL-RHPLLK   94 (108)
Q Consensus        74 l~~~p~~R~~~~~~l-~~~~~~   94 (108)
                      |..|     |+.|++ +||||+
T Consensus       320 L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          320 LNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             GGSS-----SHHHHHHHCGGGC
T ss_pred             hccC-----CHHHHHhcCCCcC
Confidence            9987     999999 999995

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=93.53  E-value=0.0022  Score=41.72  Aligned_cols=31  Identities=13%  Similarity=-0.042  Sum_probs=10.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE   32 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~   32 (108)
                      ++|++||++.+. +...+|+|++|+..+.+.+
T Consensus       403 p~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          403 FFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             HHHHHHHHC------------------CCCCT
T ss_pred             hhhccHHHhCCC-CCCcccccccccchhhhcc
Confidence            469999998764 4667899999987655443

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=92.62  E-value=0.71  Score=26.78  Aligned_cols=28  Identities=21%  Similarity=0.088  Sum_probs=17.3

Q ss_pred             ccccccccCCCCcchhHHHHHHHHHHHHh
Q psy2811           4 IACEQQLDMSYDARCDIWSLGITAIELAE   32 (108)
Q Consensus         4 ~ape~~~~~~~~~~~dv~s~g~~l~~~~~   32 (108)
                      .+||... ...+.+.-|+|+|+++|..+.
T Consensus       104 ~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          104 VAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             ---CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             CChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence            3555432 223456779999999999875

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=90.52  E-value=0.044  Score=35.54  Aligned_cols=37  Identities=14%  Similarity=0.076  Sum_probs=28.3

Q ss_pred             Ccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCC
Q psy2811           1 MSVIACEQQLD--MSYDARCDIWSLGITAIELAEGDPPL   37 (108)
Q Consensus         1 ~~y~ape~~~~--~~~~~~~dv~s~g~~l~~~~~g~~~~   37 (108)
                      +.|+|||++.+  ..|+..+|+|+...-..+...++.++
T Consensus       500 ~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          500 HHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             CGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             CCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            46999999987  66788889999887766666555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	108
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-21
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-21
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-19
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-19
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-18
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-18
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-18
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-17
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	4e-17
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-17
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-17
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-17
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-16
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-14
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-14
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	9e-14
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-13
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-12
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-12
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-12
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-12
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-12
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-12
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-11
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-11
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-11
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-11
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	8e-11
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-11
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-10
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-10
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	4e-10
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-10
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-09
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-08
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-08
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-08
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-07
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-07
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-06

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 2e-21
 Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 1/103 (0%)

Query: 3   VIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           V+ CE   D  YD + D+WSLGIT IE+AE +PP  +L+PMR L +I ++ PP L +   
Sbjct: 181 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR 240

Query: 63  C-VLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
                 DF+ +CL K+++ R    +LL+HP +   +    +EL
Sbjct: 241 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIREL 283

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (204), Expect = 4e-21
 Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 1/99 (1%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           +A E     +Y  + DIWSLGI AIE+ EG+PP  + +P+RAL+ I  N  P+L      
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242

Query: 64  -VLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAH 101
             +  DF+N CL  D+E+R  AKELL+H  LK    L+ 
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSS 281

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.5 bits (193), Expect = 1e-19
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           ++ EQ   MSY+ + DIWSLG    EL    PP +         +I      ++  R+  
Sbjct: 181 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS- 239

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRHPLL 93
             L + +   L      RP  +E+L +PL+
Sbjct: 240 DELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.0 bits (189), Expect = 6e-19
 Identities = 34/82 (41%), Positives = 51/82 (62%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           YD + D+WSLGIT IELAE  PPL +++ M AL+ I +N  P L          +FV+ C
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC 250

Query: 74  LRKDLEERPFAKELLRHPLLKK 95
           L+K  ++RP ++ LL+H  + +
Sbjct: 251 LQKIPQDRPTSEVLLKHRFVLR 272

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 3e-18
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 2/101 (1%)

Query: 6   CEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV- 64
            E           D+WSLG     L  G  P       + +  I         + F  + 
Sbjct: 172 PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS 231

Query: 65  -LLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
               DFV+  L K+ + R  A E L+HP LK+  +    ++
Sbjct: 232 IEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV 272

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.3 bits (182), Expect = 5e-18
 Identities = 17/87 (19%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 9   QLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ-IPRNPPPQLTKRFDCVLLC 67
             +  YD   D+++ G+  +E+A  + P S+      +++ +     P    +     + 
Sbjct: 184 MYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK 243

Query: 68  DFVNECLRKDLEERPFAKELLRHPLLK 94
           + +  C+R++ +ER   K+LL H   +
Sbjct: 244 EIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 75.1 bits (184), Expect = 5e-18
 Identities = 21/95 (22%), Positives = 31/95 (32%), Gaps = 2/95 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
            A E           D+WS+G+ +  L  G  P    +    L  +           F  
Sbjct: 192 AAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG 251

Query: 64  V--LLCDFVNECLRKDLEERPFAKELLRHPLLKKG 96
           +     DF+ + L  D   R    + L HP L  G
Sbjct: 252 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 286

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 72.4 bits (177), Expect = 3e-17
 Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 2/93 (2%)

Query: 5   ACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV 64
                    Y    D+WS G+    L  G PP      M  L  I        +  +D  
Sbjct: 183 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 242

Query: 65  --LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
              + D V+  L    ++R  A+E L HP  ++
Sbjct: 243 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 72.1 bits (176), Expect = 4e-17
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           ++ EQ    S DAR D++SLG    E+  G+PP +   P+   +Q  R  P   + R + 
Sbjct: 181 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG 240

Query: 64  V--LLCDFVNECLRKDLEERPFAKELLRHPLLK 94
           +   L   V + L K+ E R      +R  L++
Sbjct: 241 LSADLDAVVLKALAKNPENRYQTAAEMRADLVR 273

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.4 bits (177), Expect = 4e-17
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 2/96 (2%)

Query: 9   QLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV--LL 66
                Y    D WS+G+ A  L  G PP  D +  +   QI +      +  +D +    
Sbjct: 181 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA 240

Query: 67  CDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQ 102
            DF+   + KD E+R   ++ L+HP +     L   
Sbjct: 241 KDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKN 276

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 72.4 bits (177), Expect = 5e-17
 Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 2/94 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
            A E           D+W++G+    L  G  P +    +  L  + R         F  
Sbjct: 195 AAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS 254

Query: 64  V--LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
           V     DF+   L+K+  +R    + L HP LK 
Sbjct: 255 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG 288

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 7e-17
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---NPPPQLTKR 60
           +  E      +D + D+WSLG+   E   G PP           +I R     P  +T+ 
Sbjct: 171 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 230

Query: 61  FDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA 97
                  D ++  L+ +  +RP  +E+L HP +   +
Sbjct: 231 -----ARDLISRLLKHNPSQRPMLREVLEHPWITANS 262

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 2e-16
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 2/94 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           +A E           D+WS+G+    L  G  P         L  +         + F  
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242

Query: 64  V--LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
              L  DF+   L KD ++R   ++ L+HP +K 
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 1e-14
 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP------MRALFQIPRNPPPQL 57
           +A E      YD  CD+WSLG+    L  G PP    H       M+   ++ +   P  
Sbjct: 180 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNP 239

Query: 58  TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLAHQEL 104
                   +   +   L+ +  +R    E + HP + +  ++    L
Sbjct: 240 EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 286

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 2e-14
 Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 6/100 (6%)

Query: 4   IACEQQLDMSYDAR-CDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           +A E      + A   D+WS GI    +  G+ P          +   +     L     
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKK 231

Query: 63  C-VLLCDFVNECLRKDLEERPFAKELLRHPL----LKKGA 97
                   +++ L ++   R    ++ +       LKKGA
Sbjct: 232 IDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLKKGA 271

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 2e-14
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 3/92 (3%)

Query: 5   ACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV 64
           A E  L   Y+   D WS G+   E+  G  P         LF   R   P   +  +  
Sbjct: 171 APEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE-ELFHSIRMDNPFYPRWLE-K 228

Query: 65  LLCDFVNECLRKDLEERP-FAKELLRHPLLKK 95
              D + +   ++ E+R     ++ +HPL ++
Sbjct: 229 EAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 260

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 3e-14
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 4/94 (4%)

Query: 1   MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN--PPPQLT 58
           M+      Q    Y  + D+++ GI   EL  G  P S+++    +  +       P L+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232

Query: 59  KRFDCVL--LCDFVNECLRKDLEERPFAKELLRH 90
           K        +   + ECL+K  +ERP   ++L  
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 4e-14
 Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 2/92 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           ++ E   + S     D+W+LG    +L  G PP    +      +I +       K F  
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP- 235

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
               D V + L  D  +R   +E+  +  LK 
Sbjct: 236 -KARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 4e-14
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 42/134 (31%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPL-------------------------- 37
           ++ E+     Y  + DIWS+G++ +E+A G  P+                          
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPR 229

Query: 38  ------------SDLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECLRKDLEER 81
                        D  P  A+F+    I   PPP+L      +   DFVN+CL K+  ER
Sbjct: 230 PRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 289

Query: 82  PFAKELLRHPLLKK 95
              K+L+ H  +K+
Sbjct: 290 ADLKQLMVHAFIKR 303

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.2 bits (153), Expect = 9e-14
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 13/100 (13%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNPPPQLTKR 60
           IA E      Y+   D WS GI   E+  G  P  D + M+   +I       PP   + 
Sbjct: 168 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNED 227

Query: 61  FDCVLLCDFVNECLRKDLEER-----PFAKELLRHPLLKK 95
                + D ++  + +DL +R        +++  HP  K+
Sbjct: 228 -----VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 262

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.6 bits (151), Expect = 1e-13
 Identities = 16/104 (15%), Positives = 37/104 (35%), Gaps = 9/104 (8%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
            +    L +    R D+ SLG   +    G  P   L       +  R    +++   + 
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 239

Query: 64  VL------LCDFVNECLRKDLEERP---FAKELLRHPLLKKGAQ 98
           +          ++N C     +++P   + ++L R+   ++G  
Sbjct: 240 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS 283

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 8e-13
 Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 7/92 (7%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCV--LLCD 68
           D  +D   D WSLG+   EL  G  P +      +  +I R            +  L  D
Sbjct: 206 DSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKD 265

Query: 69  FVNECLRKDLEERP-----FAKELLRHPLLKK 95
            +   L KD ++R       A E+  H   +K
Sbjct: 266 LIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.3 bits (143), Expect = 1e-12
 Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 2/88 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
            A E   +  +  + D+WS GI   E  + G  P   +     + ++ +           
Sbjct: 167 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 226

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
              + + +  C   D   RP   +L   
Sbjct: 227 -PAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.0 bits (142), Expect = 2e-12
 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           +A E      +  + D+WS G+   E +  G PP  D++       + +       +   
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 260

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
             L  + + +C     E RP   EL+  
Sbjct: 261 DPLY-EVMLKCWHPKAEMRPSFSELVSR 287

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 4e-12
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 2/88 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
            + E      Y ++ D+WS G+   E  +EG  P  +      +  I         +   
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS 228

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
             +    +N C ++  E+RP    LLR 
Sbjct: 229 THVY-QIMNHCWKERPEDRPAFSRLLRQ 255

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.7 bits (141), Expect = 4e-12
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 7/94 (7%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLL 66
           E  L   Y+   D W+LG+   E+A G PP     P++   +I        +       L
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSD--L 265

Query: 67  CDFVNECLRKDLEER-----PFAKELLRHPLLKK 95
            D +   L+ DL +R         ++  H     
Sbjct: 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFAT 299

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 6e-12
 Identities = 18/95 (18%), Positives = 32/95 (33%), Gaps = 5/95 (5%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
            A E      + ++ D+WS G+   E  + G  P   +        + +           
Sbjct: 177 YAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCP 236

Query: 63  CVLLCDFVNECLRKDLEERPFAKEL---LRHPLLK 94
              + D +N C   D+E RP    +   LR+    
Sbjct: 237 -REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 270

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 6e-12
 Identities = 23/116 (19%), Positives = 35/116 (30%), Gaps = 25/116 (21%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI-------------- 49
            A E  L  SY    D+WS+G    E+    P       +  L +I              
Sbjct: 182 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 241

Query: 50  ---------PRNPPPQLTKRFDCV--LLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                           + K    +  L  D + +CL  +  +R  A   L HP  +
Sbjct: 242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 7e-12
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNEC 73
           Y    D W LG+   E+  G  P  +    R LF++      +  +          +   
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-LFELILMEEIRFPRTLS-PEAKSLLAGL 239

Query: 74  LRKDLEERP-----FAKELLRHPLLK 94
           L+KD ++R       AKE++ H    
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFL 265

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 9e-12
 Identities = 19/116 (16%), Positives = 26/116 (22%), Gaps = 27/116 (23%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI----------------- 49
                  Y +  D+WS G    EL  G P       +  L +I                 
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNP 252

Query: 50  -------PRNPPPQLTKRFDCVL---LCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                  P+      TK F            +  L      R    E   H    +
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 308

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 1e-11
 Identities = 25/94 (26%), Positives = 35/94 (37%), Gaps = 4/94 (4%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELA-EGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
            A E  L   +  + D+WS GI   EL  +G  P   +     L Q+ R           
Sbjct: 181 TAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 240

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLR--HPLLK 94
              L D + +C RK+ EERP  + L         
Sbjct: 241 -ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 273

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 1e-11
 Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 2/87 (2%)

Query: 5   ACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           A E      + +  D+W  G+   E L  G  P   +     + +I       +      
Sbjct: 177 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP- 235

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRH 90
             L   + +C   D   RP   EL   
Sbjct: 236 PTLYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 2e-11
 Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 2/88 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIEL-AEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
              E  +   + ++ DIW+ G+   E+ + G  P            I +           
Sbjct: 168 SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS 227

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
              +   +  C  +  +ERP  K LL +
Sbjct: 228 -EKVYTIMYSCWHEKADERPTFKILLSN 254

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 2e-11
 Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 11/93 (11%)

Query: 4   IACEQQLDMSYDAR-CDIWSLGITAIELAEGDPPL-SDLHPMRALFQIPRNPPPQLTKRF 61
              E      Y  R   +WSLGI   ++  GD P   D   +R      +    +     
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSEC---- 231

Query: 62  DCVLLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                   +  CL     +RP  +E+  HP ++
Sbjct: 232 -----QHLIRWCLALRPSDRPTFEEIQNHPWMQ 259

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.7 bits (136), Expect = 2e-11
 Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 5   ACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHP--MRALFQIPRNPPPQLTKRF 61
           A E     ++YD+  D +SLG    +L  G  P           + ++      +L   F
Sbjct: 173 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 232

Query: 62  DCVLLCDFVNECLRKDLEERP-----FAKELLRHPLLK 94
               L   +   L++D+  R       A+E+   P  +
Sbjct: 233 S-PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFR 269

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.6 bits (133), Expect = 4e-11
 Identities = 18/109 (16%), Positives = 27/109 (24%), Gaps = 26/109 (23%)

Query: 12  MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---------------------- 49
             Y    D+W++G    EL    P L     +  L +I                      
Sbjct: 176 RMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235

Query: 50  --PRNPPPQLTKRFDCV--LLCDFVNECLRKDLEERPFAKELLRHPLLK 94
                P   L   F      L D +      +   R  A + L+     
Sbjct: 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 284

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 5e-11
 Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 5/94 (5%)

Query: 5   ACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           A E      + +R D+WS G+T  E L+ G  P   +     +  I +    +       
Sbjct: 180 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP- 238

Query: 64  VLLCDFVNECLRKDLEERPFAKEL---LRHPLLK 94
             L   +++C     E+RP    +   +R     
Sbjct: 239 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 54.9 bits (131), Expect = 8e-11
 Identities = 21/109 (19%), Positives = 33/109 (30%), Gaps = 27/109 (24%)

Query: 14  YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI------------------------ 49
           Y    DIWS+G    E+  G P    +     L +I                        
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237

Query: 50  -PRNPPPQLTKRFDCV--LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                P         +     D +++ L+ D  +R  AK+ L H   K+
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (131), Expect = 9e-11
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           +A E      Y    D+WS G+   E ++ G  P   +       ++P+    +     D
Sbjct: 193 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD 252

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
             +  D + +C R+   ERP   ++L  
Sbjct: 253 DEVY-DLMRQCWREKPYERPSFAQILVS 279

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.5 bits (130), Expect = 1e-10
 Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 2/86 (2%)

Query: 5   ACEQQLDMSYDARCDIWSLGITAIELAEGD-PPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
             E      Y    D+W+ G+   E+      P   +     ++ +         +    
Sbjct: 210 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCP- 268

Query: 64  VLLCDFVNECLRKDLEERPFAKELLR 89
           + L + +  C  K   +RP    + R
Sbjct: 269 LELYNLMRLCWSKLPADRPSFCSIHR 294

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 54.4 bits (130), Expect = 1e-10
 Identities = 14/105 (13%), Positives = 28/105 (26%), Gaps = 11/105 (10%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI-------PRNPPPQ 56
           ++    L      R D+ +LG   +    G  P   L       +           P  +
Sbjct: 180 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 239

Query: 57  LTKRFDCVLLCDFVNECLRKDLEERP---FAKELLRHPLLKKGAQ 98
           L   F       +++       +  P   + + L    L +    
Sbjct: 240 LCAGFPEE-FYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 283

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 2e-10
 Identities = 16/115 (13%), Positives = 27/115 (23%), Gaps = 30/115 (26%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI--------------------- 49
           +  Y    D+W  G    E+    P +        L  I                     
Sbjct: 196 ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELY 255

Query: 50  ---------PRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                     R    +L          D +++ L  D  +R  + + L H     
Sbjct: 256 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 310

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (127), Expect = 3e-10
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 2/88 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
            A E      + +  D+WS GI   E ++ G+ P  D+     +  I ++          
Sbjct: 200 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP 259

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
             L    + +C +KD   RP   +++  
Sbjct: 260 SALH-QLMLDCWQKDRNHRPKFGQIVNT 286

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 3e-10
 Identities = 24/119 (20%), Positives = 35/119 (29%), Gaps = 28/119 (23%)

Query: 5   ACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI-------------- 49
           A E  L   Y     DIWSLG    E+            +  LF+I              
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229

Query: 50  -----------PRNPPPQLTKRFDCV--LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                      P+      +K    +       +++ L  D  +R  AK  L HP  + 
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 4e-10
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 3/87 (3%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
            A E     ++    D W  G+T  E    G  P   L+  + L +I +     L +  D
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGER-LPRPED 239

Query: 63  CVL-LCDFVNECLRKDLEERPFAKELL 88
           C   + + + +C     E+RP    L 
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALR 266

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 4e-10
 Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 1/87 (1%)

Query: 5   ACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           A E   +  Y  + D+WS GI   E  + G  P   +      +++ +N        +  
Sbjct: 234 APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYAT 293

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRH 90
             +   +  C   D  +RP    L   
Sbjct: 294 EEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 5e-10
 Identities = 18/87 (20%), Positives = 32/87 (36%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
           +A E   D  Y  + D+WS G+   E+           P+  LF++ +            
Sbjct: 204 MAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT 263

Query: 64  VLLCDFVNECLRKDLEERPFAKELLRH 90
             L   + +C      +RP  K+L+  
Sbjct: 264 NELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 6e-10
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 2/88 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIEL-AEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           +A E  L   Y  + D+WS G+T  EL   G  P   +        + +           
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT 239

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
            + +   + +C   D + RP  +EL+  
Sbjct: 240 -IDVYMIMVKCWMIDADSRPKFRELIIE 266

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 2e-09
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 2/88 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           ++ E   D  +    D+WS G+   E+A   + P   L   + L  +             
Sbjct: 202 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCP 261

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
             +L + +  C + + + RP   E++  
Sbjct: 262 -DMLFELMRMCWQYNPKMRPSFLEIISS 288

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 3e-09
 Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 2/87 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELA-EGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
            A E     ++  + D+WS GI   E+   G  P   +     +  + R           
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP 236

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLR 89
              L   +  C ++  E+RP    L  
Sbjct: 237 -EELYQLMRLCWKERPEDRPTFDYLRS 262

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.9 bits (118), Expect = 4e-09
 Identities = 22/120 (18%), Positives = 32/120 (26%), Gaps = 29/120 (24%)

Query: 5   ACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI--------------- 49
                  M Y+   DIWS+G    EL  G         +  L  I               
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246

Query: 50  ------------PRNPPPQLTKRFDCV--LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                        + P       F     L  D + + L  D ++R  A + L H    +
Sbjct: 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 9e-09
 Identities = 20/114 (17%), Positives = 33/114 (28%), Gaps = 29/114 (25%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI--------------------- 49
              Y    DIWS+G    E+    P     H +  L  I                     
Sbjct: 187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 246

Query: 50  ------PRNPPPQLTKRFDCV--LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 P        + F        D +++ L  +  +R   ++ L HP L++
Sbjct: 247 NYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 300

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 4e-08
 Identities = 22/114 (19%), Positives = 31/114 (27%), Gaps = 29/114 (25%)

Query: 11  DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI--------------------- 49
            M Y    DIWS+G    E+  G         +  L +I                     
Sbjct: 193 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252

Query: 50  ------PRNPPPQLTKRFDCV--LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                 P                L  + + + L  D E+R  A E L HP  + 
Sbjct: 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 306

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 5e-08
 Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 2/87 (2%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
            A E      + +  D+WS GI   E +  G+ P  +L     +  I             
Sbjct: 180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP 239

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLR 89
             +    + +C +++   RP   +++ 
Sbjct: 240 SAIY-QLMMQCWQQERARRPKFADIVS 265

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 5e-08
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 1/88 (1%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGD-PPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           +A E   D  Y  + D+WS G+   E+      P   +       +  +         + 
Sbjct: 203 MAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 262

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLRH 90
              +   + +C   +  +RP   EL+ H
Sbjct: 263 TPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 1e-07
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIE-LAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFD 62
           +A E   +  Y    D+WS GI   E  + G  P   +      +++ +     L+    
Sbjct: 214 MAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHA 273

Query: 63  CVLLCDFVNECLRKDLEERPFAKELLR 89
              + D +  C   D  +RP  K++++
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 1e-07
 Identities = 20/110 (18%), Positives = 34/110 (30%), Gaps = 28/110 (25%)

Query: 14  YDARCDIWSLGITAIELAEGDPPL----SDLHPMRALFQIPRNPPPQLTKRFDCV----- 64
           Y    D+WS G    ELA    PL         ++ +F++   P  +       +     
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238

Query: 65  -------------------LLCDFVNECLRKDLEERPFAKELLRHPLLKK 95
                                 D +   L+ +  +R  A+E L+HP    
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (107), Expect = 1e-07
 Identities = 22/138 (15%), Positives = 37/138 (26%), Gaps = 40/138 (28%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PPPQLTKRFDC 63
           E  L M Y    DIWS+G    E+            +    ++      P P+  K+   
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247

Query: 64  VL-------------------------------------LCDFVNECLRKDLEERPFAKE 86
            +                                       D +++ L  D  +R    +
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 307

Query: 87  LLRHPLLKKGAQLAHQEL 104
            L+HP +      A  E 
Sbjct: 308 ALQHPYINVWYDPAEVEA 325

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.5 bits (107), Expect = 1e-07
 Identities = 11/86 (12%), Positives = 30/86 (34%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDC 63
            A E      +  + D+W+ G+   E+A           +  ++++              
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP 242

Query: 64  VLLCDFVNECLRKDLEERPFAKELLR 89
             + + +  C + +  +RP   E+ +
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEIHQ 268

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 44.4 bits (104), Expect = 4e-07
 Identities = 20/124 (16%), Positives = 32/124 (25%), Gaps = 36/124 (29%)

Query: 7   EQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ------------------ 48
                  YD   D+WSLG     +     P    H                         
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259

Query: 49  -----------IPRNPPPQLTKRFDCVL-------LCDFVNECLRKDLEERPFAKELLRH 90
                      + R+   +  +               DF+++ LR D + R  A+E + H
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319

Query: 91  PLLK 94
           P   
Sbjct: 320 PYFY 323

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (97), Expect = 3e-06
 Identities = 12/97 (12%), Positives = 26/97 (26%), Gaps = 20/97 (20%)

Query: 13  SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVL------- 65
               R DI+++G+   E+A            +  +       P + +    V        
Sbjct: 194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN 253

Query: 66  -------------LCDFVNECLRKDLEERPFAKELLR 89
                        +   + EC   +   R  A  + +
Sbjct: 254 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.6 bits (96), Expect = 4e-06
 Identities = 24/137 (17%), Positives = 37/137 (27%), Gaps = 46/137 (33%)

Query: 4   IACEQQLDMSYDARCDIWSLGITAIELAEGDPP---------LSDLHPMRALFQIPRNPP 54
            + E  L   +    DIWS      EL  GD             D   +  + ++    P
Sbjct: 196 RSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP 255

Query: 55  PQLTKRFDCVL-------------------------------------LCDFVNECLRKD 77
             L +                                           + DF++  L+ D
Sbjct: 256 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLD 315

Query: 78  LEERPFAKELLRHPLLK 94
             +R  A  L+ HP LK
Sbjct: 316 PRKRADAGGLVNHPWLK 332

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	108
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.96
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.95
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.95
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.95
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.94
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.94
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.94
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.94
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.93
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.93
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.93
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.93
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.93
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.93
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.93
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.93
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.93
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.92
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.92
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.91
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.91
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.91
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.9
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.9
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.9
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.9
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.9
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.89
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.89
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.89
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.88
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.88
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.88
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.88
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.88
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.88
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.88
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.88
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.87
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.87
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.87
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.87
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.87
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.87
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.86
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.86
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.86
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.86
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.86
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.85
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.85
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.85
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.85
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.85
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.84
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.83
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.78
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.71
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.69
d1kq8a_	75	HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norv	86.52

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.4e-29  Score=145.71  Aligned_cols=94  Identities=23%  Similarity=0.384  Sum_probs=82.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++|..||.+.+..+...++.......+  ...+.++.+|+.+||..||++
T Consensus       168 ~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dp~~  245 (263)
T d2j4za1         168 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP--DFVTEGARDLISRLLKHNPSQ  245 (263)
T ss_dssp             GGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC--TTSCHHHHHHHHHHTCSSGGG
T ss_pred             CcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC--ccCCHHHHHHHHHHccCCHhH
Confidence            479999999999999999999999999999999999999888777777766554432  246788999999999999999


Q ss_pred             CCCHHHHhcCcccccc
Q psy2811          81 RPFAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~~l~~~~~~~~   96 (108)
                      |||+.|+++||||+..
T Consensus       246 R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         246 RPMLREVLEHPWITAN  261 (263)
T ss_dssp             SCCHHHHHTCHHHHHH
T ss_pred             CcCHHHHHcCcCcCCc
Confidence            9999999999999754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.4e-28  Score=142.80  Aligned_cols=100  Identities=41%  Similarity=0.645  Sum_probs=82.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC-CCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP-QLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..|+.++||||+|+++|+|++|..||.+.+.......+.....+ ...+...+..+++|+.+||..||.
T Consensus       180 ~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~  259 (293)
T d1yhwa1         180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVE  259 (293)
T ss_dssp             GGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTT
T ss_pred             CCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChh
Confidence            4699999999999999999999999999999999999988776665554433322 222234578899999999999999


Q ss_pred             CCCCHHHHhcCcccccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~~~~  100 (108)
                      +||++.|+++||||+...+.+
T Consensus       260 ~R~s~~eil~Hp~~~~~~~~~  280 (293)
T d1yhwa1         260 KRGSAKELLQHQFLKIAKPLS  280 (293)
T ss_dssp             TSCCHHHHTTCGGGGGCCCGG
T ss_pred             HCcCHHHHhcCHhhCCCCCCC
Confidence            999999999999998765443

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.4e-28  Score=141.87  Aligned_cols=92  Identities=26%  Similarity=0.340  Sum_probs=80.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..|+.++||||+|+++|+|++|..||.+.+..+...++..+.....+ ...+.++.+++.+||..||.+
T Consensus       178 ~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~s~~l~~li~~~L~~dp~~  256 (269)
T d2java1         178 PYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP-YRYSDELNEIITRMLNLKDYH  256 (269)
T ss_dssp             CSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCC-TTSCHHHHHHHHHHTCSSGGG
T ss_pred             cccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC-cccCHHHHHHHHHHcCCChhH
Confidence            5799999999999999999999999999999999999998877777776665544333 245788999999999999999


Q ss_pred             CCCHHHHhcCccc
Q psy2811          81 RPFAKELLRHPLL   93 (108)
Q Consensus        81 R~~~~~~l~~~~~   93 (108)
                      ||++.|+++|||+
T Consensus       257 Rps~~ell~hp~i  269 (269)
T d2java1         257 RPSVEEILENPLI  269 (269)
T ss_dssp             SCCHHHHHTSTTC
T ss_pred             CcCHHHHHhCCcC
Confidence            9999999999996

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7e-28  Score=141.69  Aligned_cols=102  Identities=36%  Similarity=0.635  Sum_probs=83.1

Q ss_pred             Cccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC-CcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQL-----DMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT-KRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~-----~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.     +..|+.++||||+|+++|+|++|..||.+.+..+.+.++.....+... +...+.++.+|+.+||
T Consensus       174 ~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L  253 (288)
T d2jfla1         174 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCL  253 (288)
T ss_dssp             CTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHS
T ss_pred             cccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHc
Confidence            4699999984     455788999999999999999999999988877777766665443322 2345788999999999


Q ss_pred             hcCCCCCCCHHHHhcCcccccccccchh
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGAQLAHQ  102 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~~~~~~  102 (108)
                      +.||++|||+.|+++||||+.....+..
T Consensus       254 ~~dp~~R~t~~ell~hp~~~~~~~~p~~  281 (288)
T d2jfla1         254 EKNVDARWTTSQLLQHPFVTVDSNKPIR  281 (288)
T ss_dssp             CSSTTTSCCHHHHTTSGGGCCCCCHHHH
T ss_pred             cCChhHCcCHHHHhcCcccCCCCCCCcH
Confidence            9999999999999999999865554433

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1e-27  Score=142.04  Aligned_cols=96  Identities=25%  Similarity=0.296  Sum_probs=82.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..|+.++||||+|+++|+|++|..||.+....+....+.........+  ...+.++.+|+.+||..||
T Consensus       173 ~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  252 (307)
T d1a06a_         173 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDP  252 (307)
T ss_dssp             CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSG
T ss_pred             ccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCH
Confidence            57999999999999999999999999999999999999888777766666554433221  2347889999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      ++|||+.|+++||||++.
T Consensus       253 ~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         253 EKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             GGSCCHHHHHHSTTTTSS
T ss_pred             hHCcCHHHHhcCHhhCCC
Confidence            999999999999999754

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-27  Score=138.93  Aligned_cols=93  Identities=20%  Similarity=0.414  Sum_probs=75.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+ .++.++||||+|+++|+|++|..||.+... ......+..+..+.......+.++.+++.+||..||+
T Consensus       177 ~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~  255 (270)
T d1t4ha_         177 PEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKD  255 (270)
T ss_dssp             CCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGG
T ss_pred             ccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHh
Confidence            57999999865 589999999999999999999999987644 3444455544433333334578899999999999999


Q ss_pred             CCCCHHHHhcCcccc
Q psy2811          80 ERPFAKELLRHPLLK   94 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~   94 (108)
                      +|||+.|+++||||+
T Consensus       256 ~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         256 ERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             GSCCHHHHHTSGGGC
T ss_pred             HCcCHHHHhCCcccC
Confidence            999999999999996

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.6e-27  Score=140.07  Aligned_cols=100  Identities=23%  Similarity=0.217  Sum_probs=78.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C--------------------CCC-
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P--------------------PPQ-   56 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~--------------------~~~-   56 (108)
                      +.|+|||++.+..|+.++||||+|+++|+|++|..||.+.+..+.+.++...   +                    ... 
T Consensus       179 ~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
T d1blxa_         179 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI  258 (305)
T ss_dssp             CTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCG
T ss_pred             hhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccch
Confidence            4799999999999999999999999999999999999988766554433110   0                    000 


Q ss_pred             -CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccccc
Q psy2811          57 -LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQLA  100 (108)
Q Consensus        57 -~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~~~  100 (108)
                       ......+..+.+|+.+||..||++|||+.|+++||||++.....
T Consensus       259 ~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~~k  303 (305)
T d1blxa_         259 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK  303 (305)
T ss_dssp             GGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred             hhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchhhC
Confidence             00112367788999999999999999999999999999875543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=2.3e-27  Score=140.65  Aligned_cols=97  Identities=38%  Similarity=0.637  Sum_probs=82.0

Q ss_pred             Ccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcC
Q psy2811           1 MSVIACEQQLD---MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKD   77 (108)
Q Consensus         1 ~~y~ape~~~~---~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~   77 (108)
                      +.|+|||++.+   ..|+.++||||+|+++|++++|..||.+.+..+.+.++.....+.......+.++.+|+.+||..|
T Consensus       175 ~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~d  254 (309)
T d1u5ra_         175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKI  254 (309)
T ss_dssp             GGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSS
T ss_pred             ccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCC
Confidence            47999999864   458889999999999999999999999888777776666655554444456889999999999999


Q ss_pred             CCCCCCHHHHhcCccccccc
Q psy2811          78 LEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        78 p~~R~~~~~~l~~~~~~~~~   97 (108)
                      |.+|||+.++++||||....
T Consensus       255 P~~Rpt~~ell~Hp~~~~~~  274 (309)
T d1u5ra_         255 PQDRPTSEVLLKHRFVLRER  274 (309)
T ss_dssp             GGGSCCHHHHTTCHHHHSCC
T ss_pred             hhHCcCHHHHHhCHHhcCCC
Confidence            99999999999999997543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.8e-27  Score=139.92  Aligned_cols=94  Identities=21%  Similarity=0.200  Sum_probs=81.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..|+.++||||+|+++|+|++|..||.+.+......++.......+.  ..+.++++|+++||..||++
T Consensus       174 ~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~  251 (288)
T d1uu3a_         174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--KFFPKARDLVEKLLVLDATK  251 (288)
T ss_dssp             GGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCT--TCCHHHHHHHHTTSCSSGGG
T ss_pred             ccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCc--cCCHHHHHHHHHHccCCHhH
Confidence            4699999999999999999999999999999999999998888777777766544322  45788999999999999999


Q ss_pred             CCCHHH------HhcCcccccc
Q psy2811          81 RPFAKE------LLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~~------~l~~~~~~~~   96 (108)
                      |+|++|      +++||||++.
T Consensus       252 R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         252 RLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             STTSGGGTCHHHHHTSGGGTTC
T ss_pred             CcCHHHHcCCHHHHcCCccCCC
Confidence            999987      5789999765

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.5e-26  Score=137.44  Aligned_cols=94  Identities=24%  Similarity=0.321  Sum_probs=82.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..|+.++||||+|+++|+|++|..||.+.+..+...++.......+.  ..+.++.+++.+||..||.+
T Consensus       165 ~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dp~~  242 (316)
T d1fota_         165 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP--FFNEDVKDLLSRLITRDLSQ  242 (316)
T ss_dssp             TTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTT
T ss_pred             ccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHh
Confidence            5799999999999999999999999999999999999998887777777666544322  45788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     +++++++||||++.
T Consensus       243 R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         243 RLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             CTTSSTTTTHHHHTSGGGSSC
T ss_pred             ccccchhhHHHHHcCcccccC
Confidence            96     89999999999874

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.93  E-value=5.4e-27  Score=140.99  Aligned_cols=97  Identities=21%  Similarity=0.171  Sum_probs=82.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++|..||.+.+..+.+.++..........  ...+.++++|+.+||..||
T Consensus       189 ~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  268 (350)
T d1koaa2         189 AEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADP  268 (350)
T ss_dssp             TTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSG
T ss_pred             ccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCCh
Confidence            47999999999999999999999999999999999999888777776665554332221  2347889999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      ++|||+.|+++||||+...
T Consensus       269 ~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         269 NTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             GGSCCHHHHHHSTTTSCTT
T ss_pred             hHCcCHHHHhcCcccCCCC
Confidence            9999999999999998653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-27  Score=139.85  Aligned_cols=96  Identities=22%  Similarity=0.255  Sum_probs=81.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++|..||.+.+..+....+.........  ....+..+.+|+++||..||
T Consensus       180 ~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  259 (293)
T d1jksa_         180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDP  259 (293)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSG
T ss_pred             CcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCCh
Confidence            4699999999999999999999999999999999999998887777776665443322  12357789999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      ++|||+.|+++||||+..
T Consensus       260 ~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         260 KKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             GGSCCHHHHHHSTTTCC-
T ss_pred             hHCcCHHHHhcCcccCCC
Confidence            999999999999999854

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.7e-27  Score=136.47  Aligned_cols=97  Identities=12%  Similarity=0.108  Sum_probs=74.3

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRA-LFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..+ +.++||||+|+++|+|++|..||........ ...+.............+.++.+|+.+||..||
T Consensus       169 ~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP  248 (271)
T d1nvra_         169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENP  248 (271)
T ss_dssp             GGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSST
T ss_pred             cCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCCh
Confidence            47999999988876 4579999999999999999999977643322 222222222222222447888999999999999


Q ss_pred             CCCCCHHHHhcCccccccc
Q psy2811          79 EERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~~   97 (108)
                      ++|||++|+++||||+...
T Consensus       249 ~~R~t~~eil~hpwf~~~l  267 (271)
T d1nvra_         249 SARITIPDIKKDRWYNKPL  267 (271)
T ss_dssp             TTSCCHHHHTTCTTTTCCC
T ss_pred             hHCcCHHHHhcCHhhCcCC
Confidence            9999999999999997543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.6e-26  Score=138.92  Aligned_cols=94  Identities=23%  Similarity=0.315  Sum_probs=82.2

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++|..||.+.+......++.......+.  ..+.++.+++++||..||.+
T Consensus       202 ~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~k  279 (350)
T d1rdqe_         202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--HFSSDLKDLLRNLLQVDLTK  279 (350)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TCCHHHHHHHHHHSCSCTTT
T ss_pred             cccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCc--cCCHHHHHHHHHHhhhCHHh
Confidence            4699999999999999999999999999999999999998887777777666544332  46788999999999999999


Q ss_pred             CC-----CHHHHhcCcccccc
Q psy2811          81 RP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        81 R~-----~~~~~l~~~~~~~~   96 (108)
                      |+     +++++++||||++.
T Consensus       280 R~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         280 RFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             CTTSSTTTTHHHHTSGGGTTC
T ss_pred             ccccccccHHHHHcCccccCC
Confidence            95     89999999999865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-26  Score=138.00  Aligned_cols=97  Identities=32%  Similarity=0.541  Sum_probs=74.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-----------------------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRA-----------------------------------   45 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~-----------------------------------   45 (108)
                      +.|+|||++.+..|+.++||||+|+++++|++|..||.+.+....                                   
T Consensus       167 ~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (322)
T d1s9ja_         167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRP  246 (322)
T ss_dssp             SCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------C
T ss_pred             ccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccccccccc
Confidence            469999999999999999999999999999999999976542211                                   


Q ss_pred             -------HhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          46 -------LFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        46 -------~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                             ...+....++.......+.++.+|+.+||..||.+|||++|+++||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~  305 (322)
T d1s9ja_         247 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  305 (322)
T ss_dssp             CCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             chhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence                   0001111111222223467899999999999999999999999999998654

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.8e-26  Score=136.72  Aligned_cols=94  Identities=22%  Similarity=0.201  Sum_probs=82.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..|+.++|+||+|+++|+|++|..||.+.+..+....+.......+.  ..+.++++|+++||+.||++
T Consensus       169 ~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~--~~s~~~~dli~~~L~~dP~~  246 (337)
T d1o6la_         169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR--TLSPEAKSLLAGLLKKDPKQ  246 (337)
T ss_dssp             GGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTT
T ss_pred             HHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCc--cCCHHHHHHHHhhccCCchh
Confidence            4799999999999999999999999999999999999998887777776666544433  56788999999999999999


Q ss_pred             CCC-----HHHHhcCcccccc
Q psy2811          81 RPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        81 R~~-----~~~~l~~~~~~~~   96 (108)
                      |++     +.++++||||++.
T Consensus       247 R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         247 RLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             STTCSTTTHHHHHTSGGGTTC
T ss_pred             hcccccccHHHHHcCcccccC
Confidence            994     8999999999764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8e-27  Score=138.87  Aligned_cols=94  Identities=21%  Similarity=0.306  Sum_probs=81.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      +.|+|||++.+..|+.++||||+|+++|+|++|..||.+.+......++....+..+.  ..+.++.+|+.+||..||++
T Consensus       167 ~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~--~~s~~~~dli~~~L~~dP~~  244 (320)
T d1xjda_         167 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--WLEKEAKDLLVKLFVREPEK  244 (320)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGG
T ss_pred             CCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc--cCCHHHHHHHHHhcccCCCC
Confidence            4699999999999999999999999999999999999998887777777665543322  45788999999999999999


Q ss_pred             CCCHH-HHhcCcccccc
Q psy2811          81 RPFAK-ELLRHPLLKKG   96 (108)
Q Consensus        81 R~~~~-~~l~~~~~~~~   96 (108)
                      ||++. ++++||||++.
T Consensus       245 R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         245 RLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             SBTTBSCGGGSGGGTTC
T ss_pred             CcCHHHHHHhCchhccC
Confidence            99995 89999999764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.93  E-value=9.3e-27  Score=140.07  Aligned_cols=96  Identities=21%  Similarity=0.225  Sum_probs=82.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++|..||.+.+..+.+.++.........  ....+.++.+|+.+||..||
T Consensus       192 ~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp  271 (352)
T d1koba_         192 AEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEP  271 (352)
T ss_dssp             GGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSG
T ss_pred             ccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCCh
Confidence            4699999999999999999999999999999999999998887777666555443322  12457889999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      .+|||+.|+++||||++.
T Consensus       272 ~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         272 RKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             GGSCCHHHHHTSTTTSSC
T ss_pred             hHCcCHHHHhcCHhhCCC
Confidence            999999999999999754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.4e-26  Score=135.65  Aligned_cols=98  Identities=21%  Similarity=0.285  Sum_probs=75.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH----HhhccCCCCCCCCC--cCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRA----LFQIPRNPPPQLTK--RFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..|+.++||||+|+++|+|++|..||.+.+....    ..++.......+..  ...+.++.+|+++||
T Consensus       177 ~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L  256 (335)
T d2ozaa1         177 PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLL  256 (335)
T ss_dssp             CSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHS
T ss_pred             cccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHc
Confidence            579999999999999999999999999999999999976543322    22233222222211  124678999999999


Q ss_pred             hcCCCCCCCHHHHhcCcccccccc
Q psy2811          75 RKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        75 ~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      ..||++||++.|+++||||.....
T Consensus       257 ~~dP~~R~s~~eil~hp~~~~~~~  280 (335)
T d2ozaa1         257 KTEPTQRMTITEFMNHPWIMQSTK  280 (335)
T ss_dssp             CSSTTTSCCHHHHHHSHHHHTTTS
T ss_pred             cCChhHCcCHHHHHcCHHhhCCCC
Confidence            999999999999999999975543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.5e-25  Score=130.62  Aligned_cols=96  Identities=19%  Similarity=0.149  Sum_probs=74.3

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---CCC----------------CCC--
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PPP----------------QLT--   58 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~~~----------------~~~--   58 (108)
                      +.|+|||++.+ ..|+.++||||+|+++|+|++|..||.+....+.+.++...   +..                ...  
T Consensus       164 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (299)
T d1ua2a_         164 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI  243 (299)
T ss_dssp             CTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCC
T ss_pred             hhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCC
Confidence            46999999865 45788999999999999999999999988776655443210   000                000  


Q ss_pred             -----CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          59 -----KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        59 -----~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                           ....+.++.+|+.+||..||++|||+.|+++||||++.
T Consensus       244 ~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         244 PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             ChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence                 01235788999999999999999999999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=1.9e-24  Score=130.44  Aligned_cols=94  Identities=19%  Similarity=0.207  Sum_probs=74.0

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH---HHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhc
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPM---RALFQIPRNPPPQLTKRFDCVLLCDFVNECLRK   76 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~   76 (108)
                      +.|+|||++.. ..|+.++||||+|+++|+|++|..||.+....   .....+.......  +...+.++.+|+.+||..
T Consensus       169 ~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~  246 (364)
T d1omwa3         169 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL--PDSFSPELRSLLEGLLQR  246 (364)
T ss_dssp             GGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCC--CSSSCHHHHHHHHHHTCS
T ss_pred             cccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCC--CCCCCHHHHHHHHHHccc
Confidence            47999999864 56899999999999999999999999865432   2222333322222  224678899999999999


Q ss_pred             CCCCCCC-----HHHHhcCcccccc
Q psy2811          77 DLEERPF-----AKELLRHPLLKKG   96 (108)
Q Consensus        77 ~p~~R~~-----~~~~l~~~~~~~~   96 (108)
                      ||.+|++     ++++++||||++.
T Consensus       247 dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         247 DVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             STTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             CHHHhCCCcccCHHHHHcCccccCC
Confidence            9999998     7999999999865

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.91  E-value=1e-24  Score=127.53  Aligned_cols=94  Identities=26%  Similarity=0.264  Sum_probs=77.4

Q ss_pred             cccccccccc------CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCC--CcCCcHHHHHHHHHH
Q psy2811           2 SVIACEQQLD------MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLT--KRFDCVLLCDFVNEC   73 (108)
Q Consensus         2 ~y~ape~~~~------~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~   73 (108)
                      .|++||.+.+      ..++.++||||+|+++|+|++|..||.+.+.......+..+......  ....+.++++|+.+|
T Consensus       174 ~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~  253 (277)
T d1phka_         174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRF  253 (277)
T ss_dssp             GGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHH
T ss_pred             CCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHH
Confidence            6899999863      34677899999999999999999999998877776666555433222  224578999999999


Q ss_pred             hhcCCCCCCCHHHHhcCccccc
Q psy2811          74 LRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                      |..||++||++.|+++||||+.
T Consensus       254 L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         254 LVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             CCSSGGGSCCHHHHTTSGGGCT
T ss_pred             ccCChhHCcCHHHHHcCHHHHH
Confidence            9999999999999999999974

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2e-25  Score=132.87  Aligned_cols=96  Identities=25%  Similarity=0.244  Sum_probs=81.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCC--cCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTK--RFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|++||.+.+..|+.++||||+|+++|+|++|..||.+.+..+...++..........  ...+.++.+|+.+||..||
T Consensus       167 ~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp  246 (321)
T d1tkia_         167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKER  246 (321)
T ss_dssp             GGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSG
T ss_pred             cccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCCh
Confidence            46999999999999999999999999999999999999988877777776655433221  1347789999999999999


Q ss_pred             CCCCCHHHHhcCcccccc
Q psy2811          79 EERPFAKELLRHPLLKKG   96 (108)
Q Consensus        79 ~~R~~~~~~l~~~~~~~~   96 (108)
                      ++||++.|+++||||+..
T Consensus       247 ~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         247 KSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGSCCHHHHHHSHHHHSC
T ss_pred             hHCcCHHHHhcCHhhccC
Confidence            999999999999999754

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1e-24  Score=127.35  Aligned_cols=89  Identities=20%  Similarity=0.247  Sum_probs=71.1

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..+ +.++||||+|+++|+|++|..||.+.+.  .    .......  +...+.++.+|+++||..||+
T Consensus       173 ~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i----~~~~~~~--~~~~s~~~~~li~~~L~~dp~  244 (273)
T d1xwsa_         173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--I----IRGQVFF--RQRVSSECQHLIRWCLALRPS  244 (273)
T ss_dssp             GGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--H----HHCCCCC--SSCCCHHHHHHHHHHTCSSGG
T ss_pred             CCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--H----hhcccCC--CCCCCHHHHHHHHHHccCCHh
Confidence            36999999988776 4578999999999999999999976431  1    1122111  124578899999999999999


Q ss_pred             CCCCHHHHhcCccccccc
Q psy2811          80 ERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        80 ~R~~~~~~l~~~~~~~~~   97 (108)
                      +|||++|+++||||++..
T Consensus       245 ~R~s~~eil~hp~~~~~~  262 (273)
T d1xwsa_         245 DRPTFEEIQNHPWMQDVL  262 (273)
T ss_dssp             GSCCHHHHHTSGGGSSCC
T ss_pred             HCcCHHHHhcCHhhCCCC
Confidence            999999999999998753

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8.5e-25  Score=127.90  Aligned_cols=93  Identities=18%  Similarity=0.230  Sum_probs=76.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++||||+|+++|++++ |..||.+.+..+....+..+.....+ ...+.++.+++.+||..||.
T Consensus       174 ~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~~~~li~~cl~~dp~  252 (277)
T d1xbba_         174 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP-AGCPREMYDLMNLCWTYDVE  252 (277)
T ss_dssp             GGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSTT
T ss_pred             ceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCC-cccCHHHHHHHHHHcCCCHh
Confidence            36999999999999999999999999999997 89999988877666666554433332 35678899999999999999


Q ss_pred             CCCCHHHHh---cCcccc
Q psy2811          80 ERPFAKELL---RHPLLK   94 (108)
Q Consensus        80 ~R~~~~~~l---~~~~~~   94 (108)
                      +||++.+|+   +|.|++
T Consensus       253 ~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         253 NRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             TSCCHHHHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHhhCHHhh
Confidence            999999984   555554

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.7e-25  Score=130.76  Aligned_cols=90  Identities=19%  Similarity=0.283  Sum_probs=73.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++ |..||.+.+....+.++.........+...+.++.+|+.+||..||+
T Consensus       230 ~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~  309 (325)
T d1rjba_         230 VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSR  309 (325)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             CccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChh
Confidence            36999999999999999999999999999997 89999887654444444444333333335678899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +|||+.+|++|
T Consensus       310 ~RPt~~ei~~~  320 (325)
T d1rjba_         310 KRPSFPNLTSF  320 (325)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999865

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.90  E-value=1.2e-23  Score=123.33  Aligned_cols=95  Identities=25%  Similarity=0.335  Sum_probs=72.4

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---C----------------------C
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---P----------------------P   54 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~----------------------~   54 (108)
                      +.|++||.+.+. .++.++|+||+|++++++++|..||.+.+..+.+.++...   .                      .
T Consensus       164 ~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T d1ob3a_         164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP  243 (286)
T ss_dssp             CTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC
T ss_pred             chhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccC
Confidence            469999998764 4688999999999999999999999887665544332110   0                      0


Q ss_pred             C--CCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          55 P--QLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        55 ~--~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                      .  .......+..+.+|+++||..||++|||++|+++||||++
T Consensus       244 ~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence            0  0001123678889999999999999999999999999974

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.7e-24  Score=126.28  Aligned_cols=96  Identities=18%  Similarity=0.193  Sum_probs=72.0

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhc---cCCCCCCCCC-----------------
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQI---PRNPPPQLTK-----------------   59 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~-----------------   59 (108)
                      +.|+|||++.+. .++.++||||+|++++++++|..||.+.+.......+   ..........                 
T Consensus       185 ~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (318)
T d3blha1         185 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQ  264 (318)
T ss_dssp             GGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSC
T ss_pred             HHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccc
Confidence            469999998764 6889999999999999999999999887665443322   1111100000                 


Q ss_pred             ----------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          60 ----------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        60 ----------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                ...+..+.+|+.+||..||++|+|++|+++||||+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         265 KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             CBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             cccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence                      0014567789999999999999999999999999853

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-23  Score=123.73  Aligned_cols=97  Identities=25%  Similarity=0.268  Sum_probs=73.7

Q ss_pred             CccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCC---CCC-----------------CCC-
Q psy2811           1 MSVIACEQQLDMSY-DARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRN---PPP-----------------QLT-   58 (108)
Q Consensus         1 ~~y~ape~~~~~~~-~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~-   58 (108)
                      +.|+|||.+....+ +.++|+||+|+++|+|++|..||.+.+..+.+.++...   ...                 ... 
T Consensus       166 ~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (298)
T d1gz8a_         166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR  245 (298)
T ss_dssp             CTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCC
T ss_pred             ceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccc
Confidence            46999999877664 67899999999999999999999987765544332110   000                 000 


Q ss_pred             ------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          59 ------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        59 ------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                            ....+.++.+|+++||..||++|||+.|+++||||++..
T Consensus       246 ~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~  290 (298)
T d1gz8a_         246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT  290 (298)
T ss_dssp             CCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCC
Confidence                  002256789999999999999999999999999998763

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.7e-24  Score=122.73  Aligned_cols=88  Identities=18%  Similarity=0.309  Sum_probs=75.5

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++||||+|+++|++++ |..||.+.+..+...++..+.... .+...+.++.+|+.+||..||++
T Consensus       166 ~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~-~p~~~~~~l~~li~~cl~~dP~~  244 (258)
T d1k2pa_         166 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY-RPHLASEKVYTIMYSCWHEKADE  244 (258)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHTTCSSGGG
T ss_pred             CcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC-CcccccHHHHHHHHHHccCCHhH
Confidence            5999999999999999999999999999997 899999988877777666554333 33356788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      |||+.++++|
T Consensus       245 RPt~~eil~~  254 (258)
T d1k2pa_         245 RPTFKILLSN  254 (258)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999976

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8e-24  Score=123.45  Aligned_cols=94  Identities=17%  Similarity=0.220  Sum_probs=75.9

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..++.++||||+|+++|++++| .+++......+....+..+.....+ ...+.++.+++.+||..||+
T Consensus       174 ~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~~P~  252 (272)
T d1qpca_         174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP-DNCPEELYQLMRLCWKERPE  252 (272)
T ss_dssp             TTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGG
T ss_pred             ccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCc-ccChHHHHHHHHHHcCCCHh
Confidence            469999999988999999999999999999985 5666666666666666554333322 35678899999999999999


Q ss_pred             CCCCHHHHhc--Cccccc
Q psy2811          80 ERPFAKELLR--HPLLKK   95 (108)
Q Consensus        80 ~R~~~~~~l~--~~~~~~   95 (108)
                      +|||+.++++  ++||..
T Consensus       253 ~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         253 DRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             GSCCHHHHHHHHHHHHHH
T ss_pred             HCcCHHHHHHHhhhhhhc
Confidence            9999999987  788764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=4.4e-24  Score=125.28  Aligned_cols=93  Identities=19%  Similarity=0.223  Sum_probs=76.7

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|+++|++++ |..||.+.+..+....+..+.....+ ...+.++.+++..||..+|++
T Consensus       177 ~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~~p~~  255 (285)
T d1u59a_         177 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP-PECPPELYALMSDCWIYKWED  255 (285)
T ss_dssp             GGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHTTCSSGGG
T ss_pred             cccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-CcCCHHHHHHHHHHcCCCHhH
Confidence            5999999999999999999999999999997 89999987766666666555433333 356788999999999999999


Q ss_pred             CCCHHHH---hcCccccc
Q psy2811          81 RPFAKEL---LRHPLLKK   95 (108)
Q Consensus        81 R~~~~~~---l~~~~~~~   95 (108)
                      ||++.++   +++.|+.-
T Consensus       256 RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         256 RPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             SCCHHHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHh
Confidence            9999888   46777643

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2e-23  Score=125.14  Aligned_cols=97  Identities=24%  Similarity=0.280  Sum_probs=73.0

Q ss_pred             CccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---------------------------C
Q psy2811           1 MSVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---------------------------N   52 (108)
Q Consensus         1 ~~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---------------------------~   52 (108)
                      +.|+|||++.+. .++.++||||+|+++++|++|..||.+.+..+.+..+..                           .
T Consensus       182 ~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (346)
T d1cm8a_         182 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPEL  261 (346)
T ss_dssp             GGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCC
T ss_pred             ccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcc
Confidence            369999998764 467899999999999999999999988765443322111                           0


Q ss_pred             CCCCC--CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          53 PPPQL--TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        53 ~~~~~--~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .....  .....+..+.+|+.+||..||++|||+.|+++||||+...
T Consensus       262 ~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         262 EKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             CCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             cccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            00000  0012367888999999999999999999999999998643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.1e-23  Score=125.50  Aligned_cols=96  Identities=21%  Similarity=0.253  Sum_probs=73.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC----------------------CCCCCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR----------------------NPPPQLT   58 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~----------------------~~~~~~~   58 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|..||.+.+......++..                      .......
T Consensus       182 ~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (355)
T d2b1pa1         182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG  261 (355)
T ss_dssp             CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCC
T ss_pred             ccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccc
Confidence            469999999999999999999999999999999999987765433222110                      0000000


Q ss_pred             ------------C------cCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          59 ------------K------RFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        59 ------------~------~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                                  .      ...+.++.+|+++||..||++|||++|+++||||+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             CCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             cccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence                        0      0114568899999999999999999999999999863

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.4e-23  Score=120.88  Aligned_cols=89  Identities=21%  Similarity=0.347  Sum_probs=72.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..|+.++||||+|+++|++++ |.+++...+..+....+..+.....+ ...+.++.+++..||..||+
T Consensus       166 ~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~~p~  244 (263)
T d1sm2a_         166 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP-RLASTHVYQIMNHCWKERPE  244 (263)
T ss_dssp             TTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCC-TTSCHHHHHHHHHHTCSSGG
T ss_pred             cccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCc-cccCHHHHHHHHHHccCCHh
Confidence            36999999999999999999999999999998 57777777766666555554333322 35578899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++++++++
T Consensus       245 ~Rps~~~il~~  255 (263)
T d1sm2a_         245 DRPAFSRLLRQ  255 (263)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999875

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=5.9e-23  Score=121.13  Aligned_cols=88  Identities=20%  Similarity=0.280  Sum_probs=74.3

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++||||+|+++|++++ |..||.+....+....+..+.....+ ...+..+.+++.+||..||.+
T Consensus       198 ~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~~P~~  276 (299)
T d1jpaa_         198 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP-MDCPSALHQLMLDCWQKDRNH  276 (299)
T ss_dssp             GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSTTT
T ss_pred             cccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC-ccchHHHHHHHHHHcCCCHhH
Confidence            5999999999999999999999999999997 89999988877776666554333222 356788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.++++.
T Consensus       277 RPs~~ei~~~  286 (299)
T d1jpaa_         277 RPKFGQIVNT  286 (299)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999998864

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.5e-23  Score=121.39  Aligned_cols=89  Identities=18%  Similarity=0.252  Sum_probs=75.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++||||+|+++|++++ |.+||.+.+..+...++..+.....+ ...+.++.+++.+||..||.
T Consensus       173 ~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li~~cl~~dp~  251 (273)
T d1mp8a_         173 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP-PNCPPTLYSLMTKCWAYDPS  251 (273)
T ss_dssp             GGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGG
T ss_pred             cccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCCHHHHHHHHHHcCCCHh
Confidence            36999999999999999999999999999987 89999988877776666655443333 25678899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +|||+.+|+++
T Consensus       252 ~Rps~~ei~~~  262 (273)
T d1mp8a_         252 RRPRFTELKAQ  262 (273)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999865

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=9.2e-23  Score=122.49  Aligned_cols=97  Identities=20%  Similarity=0.175  Sum_probs=74.3

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC-------------------CCCCC----
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR-------------------NPPPQ----   56 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~-------------------~~~~~----   56 (108)
                      +.|+|||.+.+ ..++.++||||+|+++|++++|..||...+..+.+..+..                   ...+.    
T Consensus       186 ~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  265 (350)
T d1q5ka_         186 RYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH  265 (350)
T ss_dssp             TTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCC
T ss_pred             ccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccC
Confidence            36899998775 5689999999999999999999999988776554433211                   00000    


Q ss_pred             ----CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          57 ----LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        57 ----~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                          ......+.++.+|+.+||..||++|||+.|+++||||+...
T Consensus       266 ~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             CGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             chhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence                01112467889999999999999999999999999998653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=2.4e-23  Score=121.64  Aligned_cols=93  Identities=30%  Similarity=0.370  Sum_probs=73.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCCCC--CCcCCcHHHHHHHHHHhhcCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPPQL--TKRFDCVLLCDFVNECLRKDL   78 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p   78 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++|..||.+.+..+...++........  .....+.++.+++.+||..||
T Consensus       178 ~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp  257 (277)
T d1o6ya_         178 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP  257 (277)
T ss_dssp             -TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSG
T ss_pred             ccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCH
Confidence            479999999999999999999999999999999999999887776655544433322  122457889999999999999


Q ss_pred             CCCC-CHHHHhcCcccc
Q psy2811          79 EERP-FAKELLRHPLLK   94 (108)
Q Consensus        79 ~~R~-~~~~~l~~~~~~   94 (108)
                      .+|| +++++ .|+|.+
T Consensus       258 ~~R~~sa~~l-~~~l~r  273 (277)
T d1o6ya_         258 ENRYQTAAEM-RADLVR  273 (277)
T ss_dssp             GGSCSSHHHH-HHHHHH
T ss_pred             hHCHhHHHHH-HHHHHH
Confidence            9999 55554 456553

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.8e-23  Score=120.63  Aligned_cols=87  Identities=20%  Similarity=0.253  Sum_probs=75.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+.+..++.++||||+|+++|+|++ |..||.+.+..+...++.........+...+..+.+++..||..||++
T Consensus       179 ~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~  258 (273)
T d1u46a_         179 AWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPED  258 (273)
T ss_dssp             GGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             ccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhH
Confidence            5899999999999999999999999999997 899999998888777776555444333456788999999999999999


Q ss_pred             CCCHHHHh
Q psy2811          81 RPFAKELL   88 (108)
Q Consensus        81 R~~~~~~l   88 (108)
                      |||+.+|+
T Consensus       259 RPt~~ei~  266 (273)
T d1u46a_         259 RPTFVALR  266 (273)
T ss_dssp             SCCHHHHH
T ss_pred             CcCHHHHH
Confidence            99999986

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.5e-23  Score=122.49  Aligned_cols=89  Identities=21%  Similarity=0.340  Sum_probs=73.1

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..|+.++||||+|+++|++++ |..||.+.+..+....+..+..... +...+..+.+++.+||..||.
T Consensus       177 ~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~-p~~~~~~~~~li~~cl~~dP~  255 (317)
T d1xkka_         177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ-PPICTIDVYMIMVKCWMIDAD  255 (317)
T ss_dssp             TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCC-CTTBCHHHHHHHHHHTCSSGG
T ss_pred             ccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC-CcccCHHHHHHHHHhCCCChh
Confidence            46999999999999999999999999999998 8999988776555544444332222 235678899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.++++|
T Consensus       256 ~RPs~~eil~~  266 (317)
T d1xkka_         256 SRPKFRELIIE  266 (317)
T ss_dssp             GSCCHHHHHHH
T ss_pred             hCcCHHHHHHH
Confidence            99999999876

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=8.7e-23  Score=118.50  Aligned_cols=89  Identities=17%  Similarity=0.256  Sum_probs=74.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++||||||+++|++++ |.+|+...+..+....+..+..+..+. ..+.++.+++.+||..||.
T Consensus       164 ~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~li~~cl~~dP~  242 (262)
T d1byga_         164 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD-GCPPAVYEVMKNCWHLDAA  242 (262)
T ss_dssp             TTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCT-TCCHHHHHHHHHHTCSSGG
T ss_pred             ccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCc-cCCHHHHHHHHHHcccCHh
Confidence            36999999999999999999999999999997 788898887777776665554333332 4578899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.+++++
T Consensus       243 ~Rps~~~l~~~  253 (262)
T d1byga_         243 MRPSFLQLREQ  253 (262)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999863

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=5.7e-23  Score=120.05  Aligned_cols=90  Identities=22%  Similarity=0.344  Sum_probs=68.1

Q ss_pred             CccccccccccC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh-ccCCCCCC---CCCcCCcHHHHHHHHHH
Q psy2811           1 MSVIACEQQLDM---SYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ-IPRNPPPQ---LTKRFDCVLLCDFVNEC   73 (108)
Q Consensus         1 ~~y~ape~~~~~---~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~l~~~~   73 (108)
                      +.|+|||++.+.   .|+.++||||+|+++|++++|..||.+.+....... +..+....   ......+..+.+++.+|
T Consensus       170 ~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~c  249 (276)
T d1uwha_         170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC  249 (276)
T ss_dssp             GGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHH
T ss_pred             cccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHH
Confidence            469999998653   478899999999999999999999988654433322 22221111   11223478899999999


Q ss_pred             hhcCCCCCCCHHHHhcC
Q psy2811          74 LRKDLEERPFAKELLRH   90 (108)
Q Consensus        74 l~~~p~~R~~~~~~l~~   90 (108)
                      |..||.+|||+.+++++
T Consensus       250 l~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         250 LKKKRDERPLFPQILAS  266 (276)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             cCCCHhHCcCHHHHHHH
Confidence            99999999999999876

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=9.3e-23  Score=119.60  Aligned_cols=99  Identities=24%  Similarity=0.271  Sum_probs=78.7

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++||||+|+++|++++| .+++......+.+..+..+..... +...+.++++++.+||..||+
T Consensus       178 ~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~  256 (285)
T d1fmka3         178 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPE  256 (285)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGG
T ss_pred             ccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-CcccCHHHHHHHHHHcccCHh
Confidence            369999999999999999999999999999985 566666666666666554433222 235678899999999999999


Q ss_pred             CCCCHHHHhc--Ccccccccccc
Q psy2811          80 ERPFAKELLR--HPLLKKGAQLA  100 (108)
Q Consensus        80 ~R~~~~~~l~--~~~~~~~~~~~  100 (108)
                      +||++.+|+.  ++||....+..
T Consensus       257 ~Rps~~~i~~~L~~~~~~~~p~~  279 (285)
T d1fmka3         257 ERPTFEYLQAFLEDYFTSTEPQY  279 (285)
T ss_dssp             GSCCHHHHHHHHHTTTSCSCCCC
T ss_pred             HCcCHHHHHHHHhhhhcCCCCCC
Confidence            9999999987  78887665443

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.4e-23  Score=121.62  Aligned_cols=90  Identities=18%  Similarity=0.326  Sum_probs=69.8

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||++.+..++.++||||+|+++|+|++| .+||.+......+............+...+.++.+++.+||..||.
T Consensus       200 ~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~  279 (299)
T d1ywna1         200 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS  279 (299)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred             ccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChh
Confidence            369999999999999999999999999999986 5678776543333332222222222335678899999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +|||+.++++|
T Consensus       280 ~Rpt~~eil~~  290 (299)
T d1ywna1         280 QRPTFSELVEH  290 (299)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999976

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.4e-23  Score=123.22  Aligned_cols=94  Identities=26%  Similarity=0.316  Sum_probs=71.1

Q ss_pred             CccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh----ccCCCCCCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMS--YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ----IPRNPPPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~--~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|++||.+.+..  ++.++||||+|+++|+|++|..||.+.........    ......+. + ...+.++.+|+.+||
T Consensus       194 ~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~-~-~~~s~~~~~li~~~l  271 (322)
T d1vzoa_         194 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY-P-QEMSALAKDLIQRLL  271 (322)
T ss_dssp             CTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC-C-TTSCHHHHHHHHHHT
T ss_pred             cccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCC-c-ccCCHHHHHHHHHHc
Confidence            4689999987643  57789999999999999999999977643322221    11222222 1 246788999999999


Q ss_pred             hcCCCCCC-----CHHHHhcCcccccc
Q psy2811          75 RKDLEERP-----FAKELLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~~R~-----~~~~~l~~~~~~~~   96 (108)
                      ..||.+|+     +++|+++||||++.
T Consensus       272 ~~dP~~R~s~~~~t~~eil~Hpff~~i  298 (322)
T d1vzoa_         272 MKDPKKRLGCGPRDADEIKEHLFFQKI  298 (322)
T ss_dssp             CSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             ccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence            99999999     48999999999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.3e-22  Score=117.14  Aligned_cols=87  Identities=17%  Similarity=0.229  Sum_probs=69.6

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..++.++||||+|+++|+++++ .+++...+..+....+..+.... .+...+..+.+++.+||..+|++
T Consensus       178 ~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~li~~cl~~~p~~  256 (283)
T d1mqba_         178 RWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP-TPMDCPSAIYQLMMQCWQQERAR  256 (283)
T ss_dssp             GGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC-CCTTCBHHHHHHHHHHTCSSTTT
T ss_pred             cccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCC-CchhhHHHHHHHHHHHCcCCHhH
Confidence            59999999999999999999999999999985 55565566655555554443322 22346788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.+|++
T Consensus       257 RPt~~eil~  265 (283)
T d1mqba_         257 RPKFADIVS  265 (283)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999985

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.7e-22  Score=118.30  Aligned_cols=88  Identities=19%  Similarity=0.292  Sum_probs=73.5

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..|+.++||||+|+++|++++ |..||.+.+.......+..+..... +...+..+.+++.+||+.||.
T Consensus       201 ~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~-p~~~~~~l~~li~~cl~~dP~  279 (299)
T d1fgka_         201 VKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK-PSNCTNELYMMMRDCWHAVPS  279 (299)
T ss_dssp             GGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-CSSCCHHHHHHHHHHTCSSGG
T ss_pred             hhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCC-CccchHHHHHHHHHHccCCHh
Confidence            36999999999999999999999999999997 7899988877666655555433332 235678899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +|||+.|+++
T Consensus       280 ~Rps~~eil~  289 (299)
T d1fgka_         280 QRPTFKQLVE  289 (299)
T ss_dssp             GSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999985

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.86  E-value=3.3e-22  Score=117.97  Aligned_cols=88  Identities=15%  Similarity=0.215  Sum_probs=74.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..|+.++||||+|+++|++++| .+||.+.+..+....+..+..+..+ ...+.++.+++.+||..+|+
T Consensus       206 ~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p-~~~~~~~~~li~~cl~~~P~  284 (301)
T d1lufa_         206 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACP-ENCPLELYNLMRLCWSKLPA  284 (301)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGG
T ss_pred             cCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC-ccchHHHHHHHHHHcCCChh
Confidence            369999999999999999999999999999987 4788888888777777666544333 24578899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +|||+.+|++
T Consensus       285 ~RPt~~ev~~  294 (301)
T d1lufa_         285 DRPSFCSIHR  294 (301)
T ss_dssp             GSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999963

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.1e-22  Score=119.05  Aligned_cols=98  Identities=21%  Similarity=0.211  Sum_probs=71.8

Q ss_pred             Ccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccC---------------------------C
Q psy2811           1 MSVIACEQQLD-MSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPR---------------------------N   52 (108)
Q Consensus         1 ~~y~ape~~~~-~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~---------------------------~   52 (108)
                      +.|+|||++.. ..++.++|+||+|+++++|++|..||.+....+.......                           .
T Consensus       176 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (345)
T d1pmea_         176 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHK  255 (345)
T ss_dssp             GGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCC
T ss_pred             ceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCcc
Confidence            36999999854 5568899999999999999999999987765332222100                           0


Q ss_pred             CCCCC--CCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccccc
Q psy2811          53 PPPQL--TKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGAQ   98 (108)
Q Consensus        53 ~~~~~--~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~~   98 (108)
                      .....  .....+.++.+|+.+||..||++||++.|+++||||+....
T Consensus       256 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~  303 (345)
T d1pmea_         256 NKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  303 (345)
T ss_dssp             CCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             CCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCC
Confidence            00000  00123567889999999999999999999999999985533

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2.8e-22  Score=120.16  Aligned_cols=95  Identities=25%  Similarity=0.247  Sum_probs=72.0

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhhccCCCCC----------------------CCC
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQIPRNPPP----------------------QLT   58 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------------------~~~   58 (108)
                      .|+|||.+.+.. ++.++|+||+|+++|+|++|..||.+.+.......+......                      ...
T Consensus       183 ~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (348)
T d2gfsa1         183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP  262 (348)
T ss_dssp             HTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCC
T ss_pred             cccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCC
Confidence            589999877655 577999999999999999999999887654433332111000                      000


Q ss_pred             -------CcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCcccccc
Q psy2811          59 -------KRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKG   96 (108)
Q Consensus        59 -------~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~   96 (108)
                             ....+.++.+|+++||..||.+|+|+.|+++||||+..
T Consensus       263 ~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         263 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  307 (348)
T ss_dssp             CCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCC
Confidence                   01236778999999999999999999999999999854

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.4e-21  Score=114.65  Aligned_cols=94  Identities=23%  Similarity=0.238  Sum_probs=67.9

Q ss_pred             ccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCC-CCCCHHHHHhhccC---CC-----------------------
Q psy2811           2 SVIACEQQLDMS-YDARCDIWSLGITAIELAEGDPPL-SDLHPMRALFQIPR---NP-----------------------   53 (108)
Q Consensus         2 ~y~ape~~~~~~-~~~~~dv~s~g~~l~~~~~g~~~~-~~~~~~~~~~~~~~---~~-----------------------   53 (108)
                      .|++||.+.+.. ++.++||||+|+++++|++|..|| .+.+..+...++..   ..                       
T Consensus       166 ~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (292)
T d1unla_         166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPAT  245 (292)
T ss_dssp             GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTT
T ss_pred             chhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccccccccc
Confidence            578999887665 588999999999999999998875 44444333322210   00                       


Q ss_pred             -CCCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccc
Q psy2811          54 -PPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKK   95 (108)
Q Consensus        54 -~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~   95 (108)
                       .........+..+.+|+++||..||++|||++|+++||||++
T Consensus       246 ~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~  288 (292)
T d1unla_         246 TSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD  288 (292)
T ss_dssp             CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSS
T ss_pred             chhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcC
Confidence             000001123567889999999999999999999999999975

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=5.2e-22  Score=116.51  Aligned_cols=87  Identities=14%  Similarity=0.197  Sum_probs=67.9

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCC-CCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDP-PLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||++.+..|+.++||||+|+++|++++|.. ++.+.+.......+..+... ..+...+..+.+|+.+||..||++
T Consensus       181 ~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~  259 (287)
T d1opja_         181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM-ERPEGCPEKVYELMRACWQWNPSD  259 (287)
T ss_dssp             GGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCC-CCCccchHHHHHHHHHHcCCCHhH
Confidence            5999999999999999999999999999999654 45555554444444333222 222356788999999999999999


Q ss_pred             CCCHHHHhc
Q psy2811          81 RPFAKELLR   89 (108)
Q Consensus        81 R~~~~~~l~   89 (108)
                      ||++.++++
T Consensus       260 Rps~~ei~~  268 (287)
T d1opja_         260 RPSFAEIHQ  268 (287)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999975

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=6.6e-22  Score=117.07  Aligned_cols=89  Identities=19%  Similarity=0.262  Sum_probs=74.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++||||||+++|+|++| .+||.+.+..+....+..+..+..+ ...+.++.+|+.+||..||+
T Consensus       190 ~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~li~~cl~~dP~  268 (309)
T d1fvra_         190 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP-LNCDDEVYDLMRQCWREKPY  268 (309)
T ss_dssp             TTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCC-TTBCHHHHHHHHHHTCSSGG
T ss_pred             CcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCC-ccCCHHHHHHHHHHcCCChh
Confidence            369999999999999999999999999999986 4678888877777776655433322 24678999999999999999


Q ss_pred             CCCCHHHHhcC
Q psy2811          80 ERPFAKELLRH   90 (108)
Q Consensus        80 ~R~~~~~~l~~   90 (108)
                      +||++.+++++
T Consensus       269 ~RPs~~eil~~  279 (309)
T d1fvra_         269 ERPSFAQILVS  279 (309)
T ss_dssp             GSCCHHHHHHH
T ss_pred             HCcCHHHHHHH
Confidence            99999999975

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.2e-22  Score=118.01  Aligned_cols=89  Identities=21%  Similarity=0.383  Sum_probs=71.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAE-GDPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++||||+|+++|+|++ |.+++...+....+.++.........+...+..+.+|+.+||..||.
T Consensus       211 ~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~  290 (311)
T d1t46a_         211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL  290 (311)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGG
T ss_pred             hHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChh
Confidence            46999999999999999999999999999998 67777776654444444443333333345678899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.++++
T Consensus       291 ~RPs~~~il~  300 (311)
T d1t46a_         291 KRPTFKQIVQ  300 (311)
T ss_dssp             GSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.1e-21  Score=116.07  Aligned_cols=88  Identities=18%  Similarity=0.257  Sum_probs=74.3

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhC-CCCCCCCCHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCC
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEG-DPPLSDLHPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLE   79 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~   79 (108)
                      +.|+|||.+.+..++.++|+||+|+++|++++| ..||.+.+..+.+..+..+.....+ ...+..+.+++.+||+.+|.
T Consensus       199 ~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~~P~  277 (308)
T d1p4oa_         199 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP-DNCPDMLFELMRMCWQYNPK  277 (308)
T ss_dssp             GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGG
T ss_pred             cccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCc-ccchHHHHHHHHHHcCCChh
Confidence            469999999999999999999999999999997 5888888877777766655443333 24578899999999999999


Q ss_pred             CCCCHHHHhc
Q psy2811          80 ERPFAKELLR   89 (108)
Q Consensus        80 ~R~~~~~~l~   89 (108)
                      +||++.+|++
T Consensus       278 ~RPs~~~il~  287 (308)
T d1p4oa_         278 MRPSFLEIIS  287 (308)
T ss_dssp             GSCCHHHHHH
T ss_pred             HCcCHHHHHH
Confidence            9999999986

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.85  E-value=1.5e-21  Score=116.19  Aligned_cols=96  Identities=24%  Similarity=0.297  Sum_probs=69.9

Q ss_pred             ccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCCCCCCH-HHHHhhc---------------------------cCC
Q psy2811           2 SVIACEQQLDM-SYDARCDIWSLGITAIELAEGDPPLSDLHP-MRALFQI---------------------------PRN   52 (108)
Q Consensus         2 ~y~ape~~~~~-~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~-~~~~~~~---------------------------~~~   52 (108)
                      .|+|||.+.+. .++.++|+||+|++++++++|..||..... ......+                           ...
T Consensus       194 ~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  273 (328)
T d3bqca1         194 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGR  273 (328)
T ss_dssp             GGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCC
T ss_pred             cccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccc
Confidence            59999998764 478899999999999999999999876432 1111110                           000


Q ss_pred             C--------CCCCCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          53 P--------PPQLTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        53 ~--------~~~~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                      .        .........+.++.+|+++||..||++|+|++|+++||||++..
T Consensus       274 ~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         274 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             CCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             ccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            0        00001112367889999999999999999999999999998763

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=4.3e-22  Score=119.78  Aligned_cols=97  Identities=23%  Similarity=0.249  Sum_probs=68.4

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH------HHHh---hccC--------------------
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPM------RALF---QIPR--------------------   51 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~------~~~~---~~~~--------------------   51 (108)
                      +.|+|||++.+..++.++|+||+|++++++++|+.||......      +...   .+..                    
T Consensus       193 ~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  272 (362)
T d1q8ya_         193 REYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSR  272 (362)
T ss_dssp             GGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC-
T ss_pred             ccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccc
Confidence            3699999999999999999999999999999999999654211      1110   0000                    


Q ss_pred             ----CCCCC-------------CCCcCCcHHHHHHHHHHhhcCCCCCCCHHHHhcCccccccc
Q psy2811          52 ----NPPPQ-------------LTKRFDCVLLCDFVNECLRKDLEERPFAKELLRHPLLKKGA   97 (108)
Q Consensus        52 ----~~~~~-------------~~~~~~~~~~~~l~~~~l~~~p~~R~~~~~~l~~~~~~~~~   97 (108)
                          .....             ......+.++.+|+.+||..||.+|||+.|+|+||||++..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         273 GLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             -CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             hhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence                00000             00001256788999999999999999999999999998553

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.2e-21  Score=114.91  Aligned_cols=88  Identities=18%  Similarity=0.265  Sum_probs=67.1

Q ss_pred             ccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCC-CHHHHHhhccCCCCCCCCCcCCcHHHHHHHHHHhhcCCCC
Q psy2811           2 SVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDL-HPMRALFQIPRNPPPQLTKRFDCVLLCDFVNECLRKDLEE   80 (108)
Q Consensus         2 ~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~   80 (108)
                      .|+|||.+....++.++||||||+++|++++|..||... +..+....+..+..+. .+...+.++.+++.+||..||++
T Consensus       199 ~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~-~p~~~~~~l~~li~~cl~~dP~~  277 (311)
T d1r0pa_         199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL-QPEYCPDPLYEVMLKCWHPKAEM  277 (311)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             cccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC-CcccCcHHHHHHHHHHcCCCHhH
Confidence            699999999999999999999999999999976666543 3333334444443322 22356788999999999999999


Q ss_pred             CCCHHHHhcC
Q psy2811          81 RPFAKELLRH   90 (108)
Q Consensus        81 R~~~~~~l~~   90 (108)
                      ||++.||+++
T Consensus       278 RPs~~ei~~~  287 (311)
T d1r0pa_         278 RPSFSELVSR  287 (311)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcCHHHHHHH
Confidence            9999999976

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=7.7e-20  Score=107.62  Aligned_cols=96  Identities=18%  Similarity=0.258  Sum_probs=68.0

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHhh---ccC---CCCCCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHPMRALFQ---IPR---NPPPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..++.++||||+|++++++++|..||...........   ...   ..+........+.++.+++..||
T Consensus       177 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl  256 (299)
T d1ckia_         177 ARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR  256 (299)
T ss_dssp             SSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             ccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHc
Confidence            469999999999999999999999999999999999977543322111   100   01111111235678999999999


Q ss_pred             hcCCCCCCCHHH---HhcCcccccc
Q psy2811          75 RKDLEERPFAKE---LLRHPLLKKG   96 (108)
Q Consensus        75 ~~~p~~R~~~~~---~l~~~~~~~~   96 (108)
                      ..+|++||++.+   ++++.|.+..
T Consensus       257 ~~~p~~RP~~~~i~~~l~~~~~~~~  281 (299)
T d1ckia_         257 SLRFDDKPDYSYLRQLFRNLFHRQG  281 (299)
T ss_dssp             HSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             cCChhHCcCHHHHHHHHHHHHHHcC
Confidence            999999999765   4667665443

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3.4e-18  Score=100.83  Aligned_cols=89  Identities=17%  Similarity=0.142  Sum_probs=59.3

Q ss_pred             CccccccccccCC------CCcchhHHHHHHHHHHHHhCCCCCCCCC---------------HHHHHhhccCCCC-CCCC
Q psy2811           1 MSVIACEQQLDMS------YDARCDIWSLGITAIELAEGDPPLSDLH---------------PMRALFQIPRNPP-PQLT   58 (108)
Q Consensus         1 ~~y~ape~~~~~~------~~~~~dv~s~g~~l~~~~~g~~~~~~~~---------------~~~~~~~~~~~~~-~~~~   58 (108)
                      +.|+|||++.+..      ++.++||||+|+++|++++|..|+....               .......+..... +..+
T Consensus       176 ~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  255 (303)
T d1vjya_         176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP  255 (303)
T ss_dssp             GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             cCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCC
Confidence            4699999987643      4668999999999999999987663211               1111111111111 1111


Q ss_pred             CcC----CcHHHHHHHHHHhhcCCCCCCCHHHHhc
Q psy2811          59 KRF----DCVLLCDFVNECLRKDLEERPFAKELLR   89 (108)
Q Consensus        59 ~~~----~~~~~~~l~~~~l~~~p~~R~~~~~~l~   89 (108)
                      ...    ....+.+++.+||..||++|||+.||++
T Consensus       256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             GGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             cccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            111    1245789999999999999999999975

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.69  E-value=7.2e-18  Score=98.97  Aligned_cols=88  Identities=14%  Similarity=0.097  Sum_probs=64.6

Q ss_pred             CccccccccccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH---HHHHhhccCC---CCCCCCCcCCcHHHHHHHHHHh
Q psy2811           1 MSVIACEQQLDMSYDARCDIWSLGITAIELAEGDPPLSDLHP---MRALFQIPRN---PPPQLTKRFDCVLLCDFVNECL   74 (108)
Q Consensus         1 ~~y~ape~~~~~~~~~~~dv~s~g~~l~~~~~g~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~l   74 (108)
                      +.|+|||++.+..++.++|+||+|+++|++++|..||.+...   .....++...   ..........+.++.+++..|+
T Consensus       177 ~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~  256 (293)
T d1csna_         177 ARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYAR  256 (293)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHH
T ss_pred             hhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHh
Confidence            469999999999999999999999999999999999976532   2222222111   1100001134678999999999


Q ss_pred             hcCCCCCCCHHHHh
Q psy2811          75 RKDLEERPFAKELL   88 (108)
Q Consensus        75 ~~~p~~R~~~~~~l   88 (108)
                      ..+|++||+.+.+.
T Consensus       257 ~~~~~~rP~y~~l~  270 (293)
T d1csna_         257 NLAFDATPDYDYLQ  270 (293)
T ss_dssp             HCCTTCCCCHHHHH
T ss_pred             cCCcccCcCHHHHH
Confidence            99999999877664

>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: Forkhead DNA-binding domain
domain: HFH-1 (HNF-3 forkhead homolog-1)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.52  E-value=0.73  Score=20.68  Aligned_cols=30  Identities=13%  Similarity=0.285  Sum_probs=24.1

Q ss_pred             HHHHHHhhcCCCCCCCHHHHh-----cCccccccc
Q psy2811          68 DFVNECLRKDLEERPFAKELL-----RHPLLKKGA   97 (108)
Q Consensus        68 ~l~~~~l~~~p~~R~~~~~~l-----~~~~~~~~~   97 (108)
                      .||...+...|++|.++.||.     +.|||+...
T Consensus         3 ~LI~~Ai~~sp~~~ltL~eIy~~i~~~fpy~r~~~   37 (75)
T d1kq8a_           3 ALITMAIRDSAGGRLTLAEINEYLMGKFPFFRGSY   37 (75)
T ss_dssp             HHHHHHHTTSSSSCBCHHHHHHHHHHHCTTGGGTC
T ss_pred             HHHHHHHHhCCCCCccHHHHHHHHHHhCcccccCC
Confidence            577888888999999999986     468887653