BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2812
(152 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 76/136 (55%), Gaps = 14/136 (10%)
Query: 10 INIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLV 69
I++ +LRDP F+L EL+G GTYG+VY + V+TG A
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----------- 62
Query: 70 LKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGM 129
++ I++E +LK S H NI ++YG ++++ +DQLW VME C GSVTDL++
Sbjct: 63 -EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 121
Query: 130 KKRGVSLSEDQIAYIL 145
K G +L E+ IAYI
Sbjct: 122 K--GNTLKEEWIAYIC 135
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 36/150 (24%)
Query: 8 RHINIDSL-RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXX 66
+ ++ DSL + P F + E +GEG+YG VY A ETG VA
Sbjct: 16 KKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVA----------------- 58
Query: 67 YLVLKDLSIEEEYL-VLKDLSV-----HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGG 120
+K + +E + ++K++S+ P++ +YG Y + LW VME C G
Sbjct: 59 ---IKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN------TDLWIVMEYCGAG 109
Query: 121 SVTDLVQGMKKRGVSLSEDQIAYILYGTVQ 150
SV+D++ + R +L+ED+IA IL T++
Sbjct: 110 SVSDII---RLRNKTLTEDEIATILQSTLK 136
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
L + +I S+ DP+ K+ E IG+G G VY A DV TG VA
Sbjct: 7 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----- 61
Query: 66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
K+L I E LV+++ + +PNI ++ YL D+LW VME GGS+TD+
Sbjct: 62 -----KELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDV 108
Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQV 151
V + E QIA + +Q
Sbjct: 109 VT-----ETCMDEGQIAAVCRECLQA 129
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
L + +I S+ DP+ K+ E IG+G G VY A DV TG VA
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----- 60
Query: 66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
K+L I E LV+++ + +PNI ++ YL D+LW VME GGS+TD+
Sbjct: 61 -----KELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDV 107
Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQV 151
V + E QIA + +Q
Sbjct: 108 VT-----ETCMDEGQIAAVCRECLQA 128
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
L + +I S+ DP+ K+ E IG+G G VY A DV TG VA
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----- 60
Query: 66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
K+L I E LV+++ + +PNI ++ YL D+LW VME GGS+TD+
Sbjct: 61 -----KELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDV 107
Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQV 151
V + E QIA + +Q
Sbjct: 108 VT-----ETCMDEGQIAAVCRECLQA 128
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 6 LSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXX 65
L + +I S+ DP+ K+ E IG+G G VY A DV TG VA
Sbjct: 6 LEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----- 60
Query: 66 XYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDL 125
K+L I E LV+++ + +PNI ++ YL D+LW VME GGS+TD+
Sbjct: 61 -----KELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDV 107
Query: 126 VQGMKKRGVSLSEDQIAYILYGTVQV 151
V + E QIA + +Q
Sbjct: 108 VT-----ETCMDEGQIAAVCRECLQA 128
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
Query: 12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLK 71
I S+ DP+ K+ E IG+G G VY A DV TG VA K
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK----------K 62
Query: 72 DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+L I E LV+++ + +PNI ++ YL D+LW VME GGS+TD+V
Sbjct: 63 ELII-NEILVMRE-NKNPNIVNYLDSYLVG------DELWVVMEYLAGGSLTDVVT---- 110
Query: 132 RGVSLSEDQIAYILYGTVQV 151
+ E QIA + +Q
Sbjct: 111 -ETCMDEGQIAAVCRECLQA 129
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DP F IG G++G VY+A+DV + VA K I
Sbjct: 51 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--------KWQDII 102
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+E L+ L HPN + G YLR E W VME C GS +DL++ KK L
Sbjct: 103 KEVRFLQKLR-HPNTIQYRGCYLR------EHTAWLVMEYCL-GSASDLLEVHKK---PL 151
Query: 137 SEDQIAYILYGTVQ 150
E +IA + +G +Q
Sbjct: 152 QEVEIAAVTHGALQ 165
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DP F IG G++G VY+A+DV + VA K I
Sbjct: 12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE--------KWQDII 63
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+E L+ L HPN + G YLR E W VME C GS +DL++ KK L
Sbjct: 64 KEVRFLQKLR-HPNTIQYRGCYLR------EHTAWLVMEYCL-GSASDLLEVHKK---PL 112
Query: 137 SEDQIAYILYGTVQ 150
E +IA + +G +Q
Sbjct: 113 QEVEIAAVTHGALQ 126
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+ ++LQE+IG G V A + VA L S++E
Sbjct: 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-------------LEKCQTSMDEL 60
Query: 79 YLVLKDLSV--HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV-----QGMKK 131
++ +S HPNI S+Y ++ + D+LW VM+L +GGSV D++ +G K
Sbjct: 61 LKEIQAMSQCHHPNIVSYYTSFVVK------DELWLVMKLLSGGSVLDIIKHIVAKGEHK 114
Query: 132 RGVSLSEDQIAYIL 145
GV L E IA IL
Sbjct: 115 SGV-LDESTIATIL 127
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+ ++LQE+IG G V A + VA +LK++ +
Sbjct: 9 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE----LLKEIQAMSQ 64
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV-----QGMKKRG 133
HPNI S+Y ++ + D+LW VM+L +GGSV D++ +G K G
Sbjct: 65 -------CHHPNIVSYYTSFVVK------DELWLVMKLLSGGSVLDIIKHIVAKGEHKSG 111
Query: 134 VSLSEDQIAYIL 145
V L E IA IL
Sbjct: 112 V-LDESTIATIL 122
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DP +++ +G+G +G+VY AK+ ETG A L+D +E
Sbjct: 8 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---------LEDYIVE 58
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E L D HP I G Y G +LW ++E C GG+V D + RG L
Sbjct: 59 IEILATCD---HPYIVKLLGAYYHDG------KLWIMIEFCPGGAV-DAIMLELDRG--L 106
Query: 137 SEDQIAYI 144
+E QI +
Sbjct: 107 TEPQIQVV 114
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 21/128 (16%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DP +++ +G+G +G+VY AK+ ETG A L+D +E
Sbjct: 16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---------LEDYIVE 66
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E L D HP I G Y G +LW ++E C GG+V D + RG L
Sbjct: 67 IEILATCD---HPYIVKLLGAYYHDG------KLWIMIEFCPGGAV-DAIMLELDRG--L 114
Query: 137 SEDQIAYI 144
+E QI +
Sbjct: 115 TEPQIQVV 122
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYL 80
+ +++ ++ EG + VY A+DV +G A K+ +I +E
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE-----------KNRAIIQEVC 77
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEED----QLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+K LS HPNI F G+ E D + + ELC G + + ++ M+ RG L
Sbjct: 78 FMKKLSGHPNIVQFCSAA--SIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRG-PL 133
Query: 137 SEDQIAYILYGTVQV 151
S D + I Y T +
Sbjct: 134 SCDTVLKIFYQTCRA 148
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DPR IGEG+ G V A + TG VA L+ ++ I
Sbjct: 42 DPREYLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRE-----LLFNEVVIM 96
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+Y H N+ Y YL D+LW VME GG++TD+V + +
Sbjct: 97 RDYH-------HDNVVDMYSSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 138
Query: 137 SEDQIAYILYGTVQ 150
+E+QIA + ++
Sbjct: 139 NEEQIATVCLSVLR 152
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DP F E IG+G++GEV+ D T VA I+
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE----------DIQ 53
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+E VL P + +YG YL+ + +LW +ME GGS DL++ L
Sbjct: 54 QEITVLSQCD-SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG-----PL 101
Query: 137 SEDQIAYIL 145
E QIA IL
Sbjct: 102 DETQIATIL 110
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DP F E IG+G++GEV+ D T VA I+
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE----------DIQ 53
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+E VL P + +YG YL+ + +LW +ME GGS DL++ L
Sbjct: 54 QEITVLSQCD-SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG-----PL 101
Query: 137 SEDQIAYIL 145
E QIA IL
Sbjct: 102 DETQIATIL 110
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DP F E IG+G++GEV+ D T VA I+
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE----------DIQ 68
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+E VL P + +YG YL+ + +LW +ME GGS DL++ L
Sbjct: 69 QEITVLSQCD-SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG-----PL 116
Query: 137 SEDQIAYIL 145
E QIA IL
Sbjct: 117 DETQIATIL 125
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 22/129 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DP F E IG+G++GEV+ D T VA I+
Sbjct: 24 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE----------DIQ 73
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+E VL P + +YG YL+ + +LW +ME GGS DL++ L
Sbjct: 74 QEITVLSQCD-SPYVTKYYGSYLK------DTKLWIIMEYLGGGSALDLLEPG-----PL 121
Query: 137 SEDQIAYIL 145
E QIA IL
Sbjct: 122 DETQIATIL 130
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DPR IGEG+ G V A++ +G VA L+ ++ I
Sbjct: 42 DPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRE-----LLFNEVVIM 96
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+Y H N+ Y YL ++LW +ME GG++TD+V V L
Sbjct: 97 RDYQ-------HFNVVEMYKSYL------VGEELWVLMEFLQGGALTDIVS-----QVRL 138
Query: 137 SEDQIAYILYGTVQ 150
+E+QIA + +Q
Sbjct: 139 NEEQIATVCEAVLQ 152
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DPR+ IGEG+ G V A +G VA L+ ++ I
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-----LLFNEVVIM 71
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+Y H N+ Y YL D+LW VME GG++TD+V + +
Sbjct: 72 RDYQ-------HENVVEMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 113
Query: 137 SEDQIAYILYGTVQ 150
+E+QIA + +Q
Sbjct: 114 NEEQIAAVCLAVLQ 127
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DPR+ IGEG+ G V A +G VA L+ ++ I
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-----LLFNEVVIM 75
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+Y H N+ Y YL D+LW VME GG++TD+V + +
Sbjct: 76 RDYQ-------HENVVEMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 117
Query: 137 SEDQIAYILYGTVQ 150
+E+QIA + +Q
Sbjct: 118 NEEQIAAVCLAVLQ 131
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DPR+ IGEG+ G V A +G VA L+ ++ I
Sbjct: 28 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-----LLFNEVVIM 82
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+Y H N+ Y YL D+LW VME GG++TD+V + +
Sbjct: 83 RDYQ-------HENVVEMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 124
Query: 137 SEDQIAYILYGTVQ 150
+E+QIA + +Q
Sbjct: 125 NEEQIAAVCLAVLQ 138
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DPR+ IGEG+ G V A +G VA L+ ++ I
Sbjct: 26 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-----LLFNEVVIM 80
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+Y H N+ Y YL D+LW VME GG++TD+V + +
Sbjct: 81 RDYQ-------HENVVEMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 122
Query: 137 SEDQIAYILYGTVQ 150
+E+QIA + +Q
Sbjct: 123 NEEQIAAVCLAVLQ 136
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 23/135 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DPR+ IGEG+ G V A +G VA L+ ++ I
Sbjct: 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-----LLFNEVVIM 125
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+Y H N+ Y YL D+LW VME GG++TD+V + +
Sbjct: 126 RDYQ-------HENVVEMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 167
Query: 137 SEDQIAYILYGTVQV 151
+E+QIA + +Q
Sbjct: 168 NEEQIAAVCLAVLQA 182
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 55/135 (40%), Gaps = 23/135 (17%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
DPR+ IGEG+ G V A +G VA L+ ++ I
Sbjct: 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRE-----LLFNEVVIM 202
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
+Y H N+ Y YL D+LW VME GG++TD+V + +
Sbjct: 203 RDYQ-------HENVVEMYNSYL------VGDELWVVMEFLEGGALTDIVTHTR-----M 244
Query: 137 SEDQIAYILYGTVQV 151
+E+QIA + +Q
Sbjct: 245 NEEQIAAVCLAVLQA 259
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Query: 3 YRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXX 62
Y ++R +N P + +++ +G+G +G+VY A++ ET A
Sbjct: 26 YEHVTRDLN------PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-- 77
Query: 63 XXXXYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
L+D +E + L D HPNI + E+ LW ++E C GG+V
Sbjct: 78 -------LEDYMVEIDILASCD---HPNIVKLLDAFYY------ENNLWILIEFCAGGAV 121
Query: 123 TDLVQGMKKRGVSLSEDQIAYILYGTV 149
++ +++ L+E QI + T+
Sbjct: 122 DAVMLELER---PLTESQIQVVCKQTL 145
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Query: 3 YRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXX 62
Y ++R +N P + +++ +G+G +G+VY A++ ET A
Sbjct: 26 YEHVTRDLN------PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-- 77
Query: 63 XXXXYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
L+D +E + L D HPNI + E+ LW ++E C GG+V
Sbjct: 78 -------LEDYMVEIDILASCD---HPNIVKLLDAFYY------ENNLWILIEFCAGGAV 121
Query: 123 TDLVQGMKKRGVSLSEDQIAYILYGTV 149
++ +++ L+E QI + T+
Sbjct: 122 DAVMLELER---PLTESQIQVVCKQTL 145
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 27/147 (18%)
Query: 3 YRGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXX 62
Y ++R +N P + +++ +G+G +G+VY A++ ET A
Sbjct: 26 YEHVTRDLN------PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-- 77
Query: 63 XXXXYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
L+D +E + L D HPNI + E+ LW ++E C GG+V
Sbjct: 78 -------LEDYMVEIDILASCD---HPNIVKLLDAFYY------ENNLWILIEFCAGGAV 121
Query: 123 TDLVQGMKKRGVSLSEDQIAYILYGTV 149
++ +++ L+E QI + T+
Sbjct: 122 DAVMLELER---PLTESQIQVVCKQTL 145
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 61/146 (41%), Gaps = 26/146 (17%)
Query: 1 MAY-RGLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXX 59
MA+ RG + N S DP F + IG+G++GEVY D T + VA
Sbjct: 2 MAHLRGFA---NQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAE 58
Query: 60 XXXXXXXYLVLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTG 119
I++E VL P I ++G YL+ +LW +ME G
Sbjct: 59 DEIE----------DIQQEITVLSQCD-SPYITRYFGSYLK------STKLWIIMEYLGG 101
Query: 120 GSVTDLVQGMKKRGVSLSEDQIAYIL 145
GS DL+ K G L E IA IL
Sbjct: 102 GSALDLL----KPG-PLEETYIATIL 122
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 75 IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEED--QLWFVMELCTGGSVTDLVQGMKKR 132
IE E VLK L HPNI + ++ ED ++ VME C GG + + + + R
Sbjct: 67 IEAEIEVLKSLD-HPNIIKIFEVF--------EDYHNMYIVMETCEGGELLERIVSAQAR 117
Query: 133 GVSLSEDQIAYIL 145
G +LSE +A ++
Sbjct: 118 GKALSEGYVAELM 130
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 26 ELIGE-GTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKD 84
E+IGE G +G+VY A++ ET A L+D +E + L D
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEE---------LEDYMVEIDILASCD 65
Query: 85 LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYI 144
HPNI + E+ LW ++E C GG+V ++ +++ L+E QI +
Sbjct: 66 ---HPNIVKLLDAFYY------ENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVV 113
Query: 145 LYGTV 149
T+
Sbjct: 114 CKQTL 118
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
+++K Q ++G+G++GEV KD TG A L E
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL--------REV 77
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L HPNI Y + +G + V E+ TGG + D + K+
Sbjct: 78 QLLKQLD-HPNIXKLYEFFEDKG------YFYLVGEVYTGGELFDEIISRKR 122
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 22/133 (16%)
Query: 13 DSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKD 72
+++ DP F E IG+G++GEV+ D T VA
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI---------- 65
Query: 73 LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
I++E VL + +YG YL+ +LW +ME GGS DL+ R
Sbjct: 66 EDIQQEITVLSQCD-SSYVTKYYGSYLKGS------KLWIIMEYLGGGSALDLL-----R 113
Query: 133 GVSLSEDQIAYIL 145
E QIA +L
Sbjct: 114 AGPFDEFQIATML 126
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYG 147
HPNI LR G E W ++ G++ + ++ +K +G L+EDQI ++L G
Sbjct: 85 HPNILRLVAYCLRERGAKHEA--WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 148 TVQ 150
+
Sbjct: 143 ICR 145
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
+++K Q ++G+G++GEV KD TG A L E
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL--------REV 77
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L HPNI Y + +G + V E+ TGG + D + K+
Sbjct: 78 QLLKQLD-HPNIMKLYEFFEDKG------YFYLVGEVYTGGELFDEIISRKR 122
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
+++K Q ++G+G++GEV KD TG A L E
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL--------REV 101
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L HPNI Y + +G + V E+ TGG + D + K+
Sbjct: 102 QLLKQLD-HPNIMKLYEFFEDKG------YFYLVGEVYTGGELFDEIISRKR 146
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 14 SLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
SL + + K+ L+ IG+G+YG V A + +T A KD+
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINP-------KDV 72
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
I+ E ++K L HPNI Y +Y +E + VMELC GG + D
Sbjct: 73 ERIKTEVRLMKKLH-HPNIARLYEVY------EDEQYICLVMELCHGGHLLD 117
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 15/112 (13%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
+++K Q ++G+G++GEV KD TG A L E
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL--------REV 100
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L HPNI Y + +G + V E+ TGG + D + K+
Sbjct: 101 QLLKQLD-HPNIMKLYEFFEDKG------YFYLVGEVYTGGELFDEIISRKR 145
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In
Plant
Length = 483
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 17 DPR--NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
+PR NKF+L IG G++GE+Y +++T + VA
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVA 36
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 15/112 (13%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
+++K Q ++G+G++GEV KD TG A S+ E
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE--------SLLREV 83
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L HPNI Y + +G + V E+ TGG + D + K+
Sbjct: 84 QLLKQLD-HPNIMKLYEFFEDKG------YFYLVGEVYTGGELFDEIISRKR 128
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
F++++ IG G + EVY A + G VA + DL
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL-------- 85
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
LK L+ HPN+ +Y ++ E+++L V+EL G ++ +++ KK+ + E +
Sbjct: 86 LKQLN-HPNVIKYYASFI------EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV 138
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
D R+ + ++++G G + EV A+D T VA L K+ S+E
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA----------LEGKEGSME 64
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
E VL + HPNI + +Y GG L+ +M+L +GG + D +
Sbjct: 65 NEIAVLHKIK-HPNIVALDDIY-ESGG-----HLYLIMQLVSGGELFDRI 107
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
D R+ + ++++G G + EV A+D T VA L K+ S+E
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKA----------LEGKEGSME 64
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
E VL + HPNI + +Y GG L+ +M+L +GG + D +
Sbjct: 65 NEIAVLHKIK-HPNIVALDDIY-ESGG-----HLYLIMQLVSGGELFDRI 107
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
D R+ + ++++G G + EV A+D T VA L K+ S+E
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA----------LEGKEGSME 64
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
E VL + HPNI + +Y GG L+ +M+L +GG + D +
Sbjct: 65 NEIAVLHKIK-HPNIVALDDIY-ESGG-----HLYLIMQLVSGGELFDRI 107
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE 76
D R+ + ++++G G + EV A+D T VA L K+ S+E
Sbjct: 15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA----------LEGKEGSME 64
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
E VL + HPNI + +Y GG L+ +M+L +GG + D +
Sbjct: 65 NEIAVLHKIK-HPNIVALDDIY-ESGG-----HLYLIMQLVSGGELFDRI 107
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++LQ+ IG+G + +V A+ V TG VA + E +
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF---------REVRI 67
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ VME +GG V D
Sbjct: 68 MKILN-HPNIVKLFEVI------ETEKTLYLVMEYASGGEVFD 103
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 21/121 (17%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R F E++G G + EV+ K TG A +D S+E E
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-----------AFRDSSLENE 56
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
VLK + H NI + +Y + VM+L +GG + D + +RGV +
Sbjct: 57 IAVLKKIK-HENIVTLEDIY------ESTTHYYLVMQLVSGGELFDRIL---ERGVYTEK 106
Query: 139 D 139
D
Sbjct: 107 D 107
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L+ IG G++GEV A V+ G + Y V ++E +
Sbjct: 28 YTLENTIGRGSWGEVKIA--VQKGTRI---------RRAAKKIPKYFVEDVDRFKQEIEI 76
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
+K L HPNI Y + + ++ VMELCTGG + + V
Sbjct: 77 MKSLD-HPNIIRLYETF------EDNTDIYLVMELCTGGELFERV 114
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 18/105 (17%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L+ IG G++GEV A V+ G + Y V ++E +
Sbjct: 11 YTLENTIGRGSWGEVKIA--VQKGTRI---------RRAAKKIPKYFVEDVDRFKQEIEI 59
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
+K L HPNI Y + + ++ VMELCTGG + + V
Sbjct: 60 MKSLD-HPNIIRLYETF------EDNTDIYLVMELCTGGELFERV 97
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
+ F+ ++G+G++G+V A+ ETGD A ++L+D +E
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKD-----------VILQDDDVECTM 71
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+ LS+ N P L+ D+L+FVME GG + +Q ++
Sbjct: 72 TEKRILSLARNHPFLTQLFC---CFQTPDRLFFVMEFVNGGDLMFHIQKSRR 120
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 41/130 (31%)
Query: 23 KLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSI------- 75
+LQ+ IGEG++G+ K E G V+K+++I
Sbjct: 28 RLQK-IGEGSFGKAILVKSTEDGRQ--------------------YVIKEINISRMSSKE 66
Query: 76 ----EEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
E VL ++ HPNI + R E L+ VM+ C GG + + K
Sbjct: 67 REESRREVAVLANMK-HPNIVQY------RESFEENGSLYIVMDYCEGGDLFKRINAQK- 118
Query: 132 RGVSLSEDQI 141
GV EDQI
Sbjct: 119 -GVLFQEDQI 127
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 9 RERIELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 63 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----FSL 108
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 109 DLASLILYA 117
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 9 RERIELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 63 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----FSL 108
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 109 DLASLILYA 117
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 32.7 bits (73), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
F+L +++G+G++G+V+ A+ +T A +VL D +E +
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKD-----------VVLMDDDVECTMVE 68
Query: 82 LKDLSV---HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
+ LS+ HP + + + + + L+FVME GG + +Q K +S +
Sbjct: 69 KRVLSLAWEHPFLTHMFCTFQTK------ENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 122
Query: 139 DQIAYILYG 147
A I+ G
Sbjct: 123 FYAAEIILG 131
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 389 RERIELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 443 -LTMRQFD-HPHIVKLIGVIT-------ENPVWIIMELCTLGELRSFLQVRK-----FSL 488
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 489 DLASLILYA 497
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 389 RERIELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 443 -LTMRQFD-HPHIVKLIGVIT-------ENPVWIIMELCTLGELRSFLQVRK-----FSL 488
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 489 DLASLILYA 497
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 12 IDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLK 71
I +++ P N ++++ LIG G+YG VY A D +VA + +
Sbjct: 21 IKNVKVPDN-YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR-------------MFE 66
Query: 72 DLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEE----DQLWFVMELCTGGSVTDLVQ 127
DL + +L+++++ + S Y + L PE+ D+L+ V+E+ ++
Sbjct: 67 DLI--DCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSD-----LK 119
Query: 128 GMKKRGVSLSEDQIAYILYG 147
+ K + L+E + ILY
Sbjct: 120 KLFKTPIFLTEQHVKTILYN 139
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++L + IG+G + +V A+ + TG VA + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRI 66
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ VME +GG V D
Sbjct: 67 MKVLN-HPNIVKLFEVI------ETEKTLYLVMEYASGGEVFD 102
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++L + IG+G + +V A+ + TG VA + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRI 66
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ VME +GG V D
Sbjct: 67 MKVLN-HPNIVKLFEVI------ETEKTLYLVMEYASGGEVFD 102
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 9 RERIELGRCIGEGQFG------DVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 63 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----YSL 108
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 109 DLASLILYA 117
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++L + IG+G + +V A+ + TG VA + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRI 66
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ VME +GG V D
Sbjct: 67 MKVLN-HPNIVKLFEVI------ETEKTLYLVMEYASGGEVFD 102
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++L + IG+G + +V A+ + TG VA + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF---------REVRI 66
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ VME +GG V D
Sbjct: 67 MKVLN-HPNIVKLFEVI------ETEKTLYLVMEYASGGEVFD 102
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++L + IG+G + +V A+ + TG VA + E +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF---------REVRI 66
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ VME +GG V D
Sbjct: 67 MKVLN-HPNIVKLFEVI------ETEKTLYLVMEYASGGEVFD 102
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 14 RERIELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 68 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----YSL 113
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 114 DLASLILYA 122
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 9 RERIELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 63 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----YSL 108
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 109 DLASLILYA 117
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++L + IG+G + +V A+ + TG VA + E +
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF---------REVRI 59
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ VME +GG V D
Sbjct: 60 MKVLN-HPNIVKLFEVI------ETEKTLYLVMEYASGGEVFD 95
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
FK+ L+G+G++ VY A+ + TG VA ++ E +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQ--------RVQNEVKI 64
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
L HP+I Y + + + ++ V+E+C G ++ + +K R SE++
Sbjct: 65 HCQLK-HPSILELYNYF------EDSNYVYLVLEMCHNG---EMNRYLKNRVKPFSENEA 114
Query: 142 AYILYGTV 149
+ ++ +
Sbjct: 115 RHFMHQII 122
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 37 RERIELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 91 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----YSL 136
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 137 DLASLILYA 145
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
N+++L IG G++G++Y D+ G+ VA
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVA 38
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVA 49
K++ E IGEGTYG V+ AK+ ET + VA
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVA 31
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
NK++L IG G++G++Y ++ +G+ VA
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVA 38
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
N+++L IG G++G++Y D+ G+ VA
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVA 36
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVA 49
K++ E IGEGTYG V+ AK+ ET + VA
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVA 31
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 11 RERIELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 65 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----YSL 110
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 111 DLASLILYA 119
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 6 RERIELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 59
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 60 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----YSL 105
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 106 DLASLILYA 114
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R + +L IGEG +G DV G +++ +++ ++E
Sbjct: 12 RERIELGRCIGEGQFG------DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
L ++ HP+I G+ E+ +W +MELCT G + +Q K S
Sbjct: 66 -LTMRQFD-HPHIVKLIGVI-------TENPVWIIMELCTLGELRSFLQVRK-----YSL 111
Query: 139 DQIAYILYG 147
D + ILY
Sbjct: 112 DLASLILYA 120
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 20/129 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
F L +++G+G++G+V+ A+ +T A +VL D +E +
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKD-----------VVLMDDDVECTMVE 67
Query: 82 LKDLSV---HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
+ LS+ HP + + + + + L+FVME GG + +Q K +S +
Sbjct: 68 KRVLSLAWEHPFLTHMFCTFQTK------ENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT 121
Query: 139 DQIAYILYG 147
A I+ G
Sbjct: 122 FYAAEIILG 130
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++L + IG+G + +V A+ + TG VA + E +
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF---------REVRI 67
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ +ME +GG V D
Sbjct: 68 MKILN-HPNIVKLFEVI------ETEKTLYLIMEYASGGEVFD 103
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 15/97 (15%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YGEV KD TG A L +E VLK L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL--------DEVAVLKQLD- 62
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
HPNI Y + ++ + VME+ GG + D
Sbjct: 63 HPNIMKLYEFF------EDKRNYYLVMEVYRGGELFD 93
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 16/103 (15%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
++L + IG+G + +V A+ + TG VA + E +
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF---------REVRI 64
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
+K L+ HPNI + + E L+ +ME +GG V D
Sbjct: 65 MKILN-HPNIVKLFEVI------ETEKTLYLIMEYASGGEVFD 100
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 17 DPR---NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
DPR N+F+ +L+G+GT+G+V K+ TG + A L
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT---- 59
Query: 74 SIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ S HP + + L+ Q D+L FVME GG +
Sbjct: 60 ----ENRVLQN-SRHPFLTA-----LKYSFQ-THDRLCFVMEYANGGEL 97
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 15/105 (14%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
++++ + +G G YGEV KD TG A L +E
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL--------DEV 72
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD 124
VLK L HPNI Y + ++ + VME+ GG + D
Sbjct: 73 AVLKQLD-HPNIMKLYEFF------EDKRNYYLVMEVYRGGELFD 110
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVA 33
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVA 34
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVA 35
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVA 35
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVA 34
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVA 35
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVA 34
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A
Complexed With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVA 35
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin
A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVA 31
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex
With A Peptide Containing Both The Substrate And
Recruitment Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
F82h-L83v- H84d Mutant With An
O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVA 35
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVA 31
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVA 31
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVA 36
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVA 34
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVA 33
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVA 31
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr
160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVA 39
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN
COMPLEX With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVA 33
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A
Complexed With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVA 35
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN
OXINDOLE Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu-
Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Dph- 042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Din- 234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With
Din- 232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And
Inactive Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin
Binding Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With
Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE
INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of
Cdk2, Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor
Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVA 31
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVA 39
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVA 36
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active
Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVA 33
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin
A3 Complex With The Inhibitor Ro3306
Length = 299
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVA 31
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin
B
Length = 289
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVA 32
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVA 49
F+ E IGEGTYG VY A++ TG+ VA
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVA 33
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
F+L+ L+GEG YG V A TG+ VA L L E +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP----------LFALRTLREIKI 62
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
LK H NI + + + R ++++ + EL TDL + + + LS+D I
Sbjct: 63 LKHFK-HENIITIFNIQ-RPDSFENFNEVYIIQELMQ----TDLHRVISTQ--MLSDDHI 114
Query: 142 AYILYGTVQV 151
Y +Y T++
Sbjct: 115 QYFIYQTLRA 124
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 19/79 (24%)
Query: 16 RDPRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSI 75
R ++F+++ + G+GT+G V K+ TG VA V++D
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK----------------VIQDPRF 62
Query: 76 EEEYL-VLKDLSV--HPNI 91
L +++DL+V HPNI
Sbjct: 63 RNRELQIMQDLAVLHHPNI 81
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
F+L+ L+GEG YG V A TG+ VA L L E +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP----------LFALRTLREIKI 62
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
LK H NI + + + R ++++ + EL TDL + + + LS+D I
Sbjct: 63 LKHFK-HENIITIFNIQ-RPDSFENFNEVYIIQELMQ----TDLHRVISTQ--MLSDDHI 114
Query: 142 AYILYGTVQV 151
Y +Y T++
Sbjct: 115 QYFIYQTLRA 124
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 58
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 59 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 97
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 58
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 59 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 97
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
F+L+ L+GEG YG V A TG+ VA L L E +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKP----------LFALRTLREIKI 62
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQI 141
LK H NI + + + R ++++ + EL TDL + + + LS+D I
Sbjct: 63 LKHFK-HENIITIFNIQ-RPDSFENFNEVYIIQELMQ----TDLHRVISTQ--MLSDDHI 114
Query: 142 AYILYGTVQV 151
Y +Y T++
Sbjct: 115 QYFIYQTLRA 124
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 56
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 57 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 95
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 16/110 (14%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYL 80
+ L+E+IG G +G+VY + GD VA ++ +E
Sbjct: 8 ELTLEEIIGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIE-------NVRQEAK 58
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
+ L HPNI + G+ L+ E L VME GG + ++ G +
Sbjct: 59 LFAMLK-HPNIIALRGVCLK------EPNLCLVMEFARGGPLNRVLSGKR 101
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 26/129 (20%)
Query: 24 LQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSI----EEEY 79
++ LIG G+YG VY A D T +VA +L++++I + +Y
Sbjct: 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR---ILREITILNRLKSDY 86
Query: 80 LV-LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSE 138
++ L DL + ++ F D+L+ V+E+ ++ + K + L+E
Sbjct: 87 IIRLYDLIIPDDLLKF-------------DELYIVLEIADSD-----LKKLFKTPIFLTE 128
Query: 139 DQIAYILYG 147
+ I ILY
Sbjct: 129 EHIKTILYN 137
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 58
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 59 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 97
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 58
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 59 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 97
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 58
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 59 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 97
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 28 IGEGTYGEVYWAKDVETGDHVA 49
+GEGTYGEVY A D T + VA
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVA 63
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 35/125 (28%)
Query: 25 QELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE----EEYL 80
Q +G G++GEV+ KD +TG A +K + +E EE +
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCA--------------------VKKVRLEVFRVEELV 102
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
LS P I YG +R G + MEL GGS+ L++ M L ED+
Sbjct: 103 ACAGLS-SPRIVPLYG-AVREG-----PWVNIFMELLEGGSLGQLIKQMG----CLPEDR 151
Query: 141 IAYIL 145
Y L
Sbjct: 152 ALYYL 156
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEIXI 58
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 59 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 97
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV-QGMKKR 132
+L++L HPNI +Y + R L+ VME C GG + ++ +G K+R
Sbjct: 58 LLRELK-HPNIVRYYDRIIDRTNT----TLYIVMEYCEGGDLASVITKGTKER 105
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 35/125 (28%)
Query: 25 QELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE----EEYL 80
Q +G G++GEV+ KD +TG A +K + +E EE +
Sbjct: 79 QPRVGRGSFGEVHRMKDKQTGFQCA--------------------VKKVRLEVFRVEELV 118
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
LS P I YG +R G + MEL GGS+ L++ M L ED+
Sbjct: 119 ACAGLS-SPRIVPLYG-AVREG-----PWVNIFMELLEGGSLGQLIKQMG----CLPEDR 167
Query: 141 IAYIL 145
Y L
Sbjct: 168 ALYYL 172
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEIXI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEIXI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV-QGMKKR 132
+L++L HPNI +Y + R L+ VME C GG + ++ +G K+R
Sbjct: 58 LLRELK-HPNIVRYYDRIIDRTNT----TLYIVMEYCEGGDLASVITKGTKER 105
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV-QGMKKR 132
+L++L HPNI +Y + R L+ VME C GG + ++ +G K+R
Sbjct: 58 LLRELK-HPNIVRYYDRIIDRTNT----TLYIVMEYCEGGDLASVITKGTKER 105
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 58
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 59 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 97
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human
P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
D +K++ IG+GT+GEV+ A+ +TG VA
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA 46
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint
And Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
D +K++ IG+GT+GEV+ A+ +TG VA
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA 47
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 30.0 bits (66), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 17/90 (18%)
Query: 26 ELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDL 85
++IG G++G V+ AK VE+ D VA VL+D + L + +
Sbjct: 46 KVIGNGSFGVVFQAKLVES-DEVAIKK----------------VLQDKRFKNRELQIMRI 88
Query: 86 SVHPNIPSFYGLYLRRGGQPEEDQLWFVME 115
HPN+ + G + +E L V+E
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
D +K++ IG+GT+GEV+ A+ +TG VA
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA 47
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
D +K++ IG+GT+GEV+ A+ +TG VA
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVA 47
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
N F + +IG G +GEVY + +TG A
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYA 218
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
N F + +IG G +GEVY + +TG A
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYA 218
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 29.6 bits (65), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
N F + +IG G +GEVY + +TG A
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYA 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 35/125 (28%)
Query: 25 QELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIE----EEYL 80
Q +G G++GEV+ KD +TG A +K + +E EE +
Sbjct: 77 QPRLGRGSFGEVHRMKDKQTGFQCA--------------------VKKVRLEVFRVEELV 116
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQ 140
LS P I YG +R G + MEL GGS+ L++ M L ED+
Sbjct: 117 ACAGLS-SPRIVPLYG-AVREG-----PWVNIFMELLEGGSLGQLIKQMG----CLPEDR 165
Query: 141 IAYIL 145
Y L
Sbjct: 166 ALYYL 170
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 29.6 bits (65), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
N F + +IG G +GEVY + +TG A
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYA 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
N+F+ +L+G+GT+G+V K+ TG + A L E
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT--------EN 60
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
VL++ S HP + + L+ Q D+L FVME GG +
Sbjct: 61 RVLQN-SRHPFLTA-----LKYSFQ-THDRLCFVMEYANGGEL 96
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
N K Q++IGEG +G+V A+ + G + +D + E E
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------RDFAGELE- 77
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
VL L HPNI + G RG L+ +E G++ D ++
Sbjct: 78 -VLCKLGHHPNIINLLGACEHRG------YLYLAIEYAPHGNLLDFLR 118
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YGEV +D T HV L+ EE VLK L
Sbjct: 45 LGSGAYGEVLLCRDKVT--HVERAIKIIRKTSVSTSSNSKLL-------EEVAVLKLLD- 94
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTD-LVQGMK 130
HPNI Y + ++ + VME GG + D ++ MK
Sbjct: 95 HPNIMKLYDFF------EDKRNYYLVMECYKGGELFDEIIHRMK 132
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
N K Q++IGEG +G+V A+ + G + +D + E E
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------RDFAGELE- 67
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
VL L HPNI + G RG L+ +E G++ D ++
Sbjct: 68 -VLCKLGHHPNIINLLGACEHRG------YLYLAIEYAPHGNLLDFLR 108
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
N+F+ +L+G+GT+G+V K+ TG + A L E
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT--------EN 59
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
VL++ S HP + + L+ Q D+L FVME GG +
Sbjct: 60 RVLQN-SRHPFLTA-----LKYSFQ-THDRLCFVMEYANGGEL 95
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 29.3 bits (64), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 14/108 (12%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEY 79
N K Q++IGEG +G+V A+ + G + +D + E E
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH------RDFAGELE- 74
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
VL L HPNI + G RG L+ +E G++ D ++
Sbjct: 75 -VLCKLGHHPNIINLLGACEHRG------YLYLAIEYAPHGNLLDFLR 115
>pdb|4GMJ|A Chain A, Structure Of Human Not1 Mif4g Domain Co-Crystallized With
Caf1
pdb|4GMJ|C Chain C, Structure Of Human Not1 Mif4g Domain Co-Crystallized With
Caf1
pdb|4GMJ|E Chain E, Structure Of Human Not1 Mif4g Domain Co-Crystallized With
Caf1
Length = 229
Score = 29.3 bits (64), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQL 110
+YLV+K +S+ PN S Y +L PE +++
Sbjct: 44 QYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKM 76
>pdb|4GML|A Chain A, Crystal Structure Of Human Not1 Mif4g Domain
pdb|4GML|B Chain B, Crystal Structure Of Human Not1 Mif4g Domain
pdb|4GML|C Chain C, Crystal Structure Of Human Not1 Mif4g Domain
pdb|4GML|D Chain D, Crystal Structure Of Human Not1 Mif4g Domain
pdb|4GML|E Chain E, Crystal Structure Of Human Not1 Mif4g Domain
pdb|4GML|F Chain F, Crystal Structure Of Human Not1 Mif4g Domain
Length = 235
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQL 110
+YLV+K +S+ PN S Y +L PE +++
Sbjct: 50 QYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKM 82
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+++ + + +G G GEV A + +T VA L ++E E
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL---NVETE 65
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L+ HP I + + + + V+EL GG + D V G K+
Sbjct: 66 IEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGGELFDKVVGNKR 110
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+++ + + +G G GEV A + +T VA L ++E E
Sbjct: 15 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL---NVETE 71
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L+ HP I + + + + V+EL GG + D V G K+
Sbjct: 72 IEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGGELFDKVVGNKR 116
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+++ + + +G G GEV A + +T VA L ++E E
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL---NVETE 65
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L+ HP I + + + + V+EL GG + D V G K+
Sbjct: 66 IEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGGELFDKVVGNKR 110
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+++ + + +G G GEV A + +T VA L ++E E
Sbjct: 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL---NVETE 65
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L+ HP I + + + + V+EL GG + D V G K+
Sbjct: 66 IEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGGELFDKVVGNKR 110
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 29.3 bits (64), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+++ + + +G G GEV A + +T VA L ++E E
Sbjct: 8 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL---NVETE 64
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L+ HP I + + + + V+EL GG + D V G K+
Sbjct: 65 IEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGGELFDKVVGNKR 109
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 23/122 (18%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXY---LVLKDLSIEEEYLVLKD 84
+G G YG V A D +G+ VA Y L+LK + E +L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 85 LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYI 144
+ ++ +FY YL VM TDL + M G+ SE++I Y+
Sbjct: 110 FTPASSLRNFYDFYL-------------VMPFMQ----TDLQKIM---GMEFSEEKIQYL 149
Query: 145 LY 146
+Y
Sbjct: 150 VY 151
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 48/122 (39%), Gaps = 23/122 (18%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXY---LVLKDLSIEEEYLVLKD 84
+G G YG V A D +G+ VA Y L+LK + E +L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 85 LSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYI 144
+ ++ +FY YL VM TDL + M G+ SE++I Y+
Sbjct: 92 FTPASSLRNFYDFYL-------------VMPFMQ----TDLQKIM---GLKFSEEKIQYL 131
Query: 145 LY 146
+Y
Sbjct: 132 VY 133
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 14 SLRDPR-----NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYL 68
SL P+ N+F+ +L+G+GT+G+V K+ TG + A L
Sbjct: 137 SLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL 196
Query: 69 VLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ S HP + + L+ Q D+L FVME GG +
Sbjct: 197 T--------ENRVLQN-SRHPFLTA-----LKYSFQT-HDRLCFVMEYANGGEL 235
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V + KDLS +
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAV----GIDKDKPKEAVTVAVKMLKDDATEKDLSDLV 88
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEX 142
Query: 137 SED 139
S D
Sbjct: 143 SYD 145
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 20/114 (17%)
Query: 14 SLRDPR-----NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYL 68
SL P+ N+F+ +L+G+GT+G+V K+ TG + A L
Sbjct: 140 SLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTL 199
Query: 69 VLKDLSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ S HP + + L+ Q D+L FVME GG +
Sbjct: 200 T--------ENRVLQN-SRHPFLTA-----LKYSFQT-HDRLCFVMEYANGGEL 238
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+++ + + +G G GEV A + +T VA L ++E E
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL---NVETE 190
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L+ HP I + + + + V+EL GG + D V G K+
Sbjct: 191 IEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGGELFDKVVGNKR 235
>pdb|1Q90|D Chain D, Structure Of The Cytochrome B6f (Plastohydroquinone :
Plastocyanin Oxidoreductase) From Chlamydomonas
Reinhardtii
Length = 159
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 15 LRDPRNKFKLQELIGEGTYGEVYWAKDV 42
L DP K KL + +G TYGE W D+
Sbjct: 9 LSDPVLKAKLAKGMGHNTYGEPAWPNDL 36
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 82 EGIIMKDFS-HPNVLSLLGICLRSEGSP 108
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 88
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 89 SEMEMMKMIGKHKNIITLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 137 SED 139
S D
Sbjct: 143 SYD 145
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
IGEG+YG V+ ++ +TG VA V+K +++ E +LK L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDP--------VIKKIAL-REIRMLKQLK- 60
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILYG 147
HPN+ + ++ R+ +L V E C + +L +RGV E + I +
Sbjct: 61 HPNLVNLLEVFRRKR------RLHLVFEYCDHTVLHEL--DRYQRGV--PEHLVKSITWQ 110
Query: 148 TVQV 151
T+Q
Sbjct: 111 TLQA 114
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 80 EGIIMKDFS-HPNVLSLLGICLRSEGSP 106
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 81 EGIIMKDFS-HPNVLSLLGICLRSEGSP 107
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 19 RNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEE 78
R+++ + + +G G GEV A + +T VA L ++E E
Sbjct: 148 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPAL---NVETE 204
Query: 79 YLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKK 131
+LK L+ HP I + + + + V+EL GG + D V G K+
Sbjct: 205 IEILKKLN-HPCIIKIKNFF-------DAEDYYIVLELMEGGELFDKVVGNKR 249
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 82 EGIIMKDFS-HPNVLSLLGICLRSEGSP 108
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 23/129 (17%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEE 77
PR+K L + +GEG +G+V A+ V +LKD + EE
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK----------MLKDDATEE 82
Query: 78 -------EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMK 130
E ++K + H NI + G + G L+ ++E + G++ + ++ +
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARR 136
Query: 131 KRGVSLSED 139
G+ S D
Sbjct: 137 PPGMEYSYD 145
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 79 EGIIMKDFS-HPNVLSLLGICLRSEGSP 105
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 140 EGIIMKDFS-HPNVLSLLGICLRSEGSP 166
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 24 LQELIGEGTYGEVYWAKDVET-GDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVL 82
E+IG G +G VY ++ G + +L E +++
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT--------EGIIM 90
Query: 83 KDLSVHPNIPSFYGLYLRRGGQP 105
KD S HPN+ S G+ LR G P
Sbjct: 91 KDFS-HPNVLSLLGICLRSEGSP 112
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 24 LQELIGEGTYGEVYWAKDVET-GDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVL 82
E+IG G +G VY ++ G + +L E +++
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT--------EGIIM 103
Query: 83 KDLSVHPNIPSFYGLYLRRGGQP 105
KD S HPN+ S G+ LR G P
Sbjct: 104 KDFS-HPNVLSLLGICLRSEGSP 125
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVE 43
K++ E +GEGTYG VY AKD +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ 44
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 81 EGIIMKDFS-HPNVLSLLGICLRSEGSP 107
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 88
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 137 SED 139
S D
Sbjct: 143 SYD 145
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 88
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 137 SED 139
S D
Sbjct: 143 SYD 145
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 81 EGIIMKDFS-HPNVLSLLGICLRSEGSP 107
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 78 EGIIMKDFS-HPNVLSLLGICLRSEGSP 104
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 88
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 89 SEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 137 SED 139
S D
Sbjct: 143 SYD 145
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 100 EGIIMKDFS-HPNVLSLLGICLRSEGSP 126
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVE 43
K++ E +GEGTYG VY AKD +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ 44
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 79 EGIIMKDFS-HPNVLSLLGICLRSEGSP 105
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 81 EGIIMKDFS-HPNVLSLLGICLRSEGSP 107
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 80 EGIIMKDFS-HPNVLSLLGICLRSEGSP 106
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 25 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 80
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 81 SEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 134
Query: 137 SED 139
S D
Sbjct: 135 SYD 137
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 134
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 135 SEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 188
Query: 137 SED 139
S D
Sbjct: 189 SYD 191
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG YGEV A + T + VA +I++E +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 58
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 59 NAMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 97
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 73 EGIIMKDFS-HPNVLSLLGICLRSEGSP 99
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 22 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 77
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 78 SEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 131
Query: 137 SED 139
S D
Sbjct: 132 SYD 134
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQP 105
E +++KD S HPN+ S G+ LR G P
Sbjct: 76 EGIIMKDFS-HPNVLSLLGICLRSEGSP 102
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 20 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 75
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI + G + G L+ ++E + G++ + ++ + G+
Sbjct: 76 SEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 129
Query: 137 SED 139
S D
Sbjct: 130 SYD 132
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 20 NKFKLQELIGEGTYGEVYWA 39
N FK+++ IGEGT+ VY A
Sbjct: 21 NVFKIEDKIGEGTFSSVYLA 40
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
With Y- 27632
Length = 350
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + IG G++G V K +ETG+H A
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYA 70
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor
H- 1152p
Length = 350
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + IG G++G V K +ETG+H A
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYA 70
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + IG G++G V K +ETG+H A
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYA 70
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 77
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPP 131
Query: 133 GVSLS 137
G+ S
Sbjct: 132 GLEFS 136
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 28 IGEGTYGEVYWAKDVETG 45
IGEG YG+V+ A+D++ G
Sbjct: 19 IGEGAYGKVFKARDLKNG 36
>pdb|3DDM|A Chain A, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bordetella Bronchiseptica Rb50
pdb|3DDM|B Chain B, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bordetella Bronchiseptica Rb50
pdb|3DDM|C Chain C, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bordetella Bronchiseptica Rb50
pdb|3DDM|D Chain D, Crystal Structure Of Mandelate RacemaseMUCONATE
Lactonizing Enzyme From Bordetella Bronchiseptica Rb50
Length = 392
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 3 YRGLSRHINIDSLRDPRNKFKLQELIGEGT 32
YR + D RD RN ++EL+G T
Sbjct: 171 YRAFKLKVGFDDARDVRNALHVRELLGAAT 200
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 11/123 (8%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IE 76
PR+K L + +GEG +G+V A+ V KDLS +
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE----KDLSDLV 88
Query: 77 EEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSL 136
E ++K + H NI G + G L+ ++E + G++ + ++ + G+
Sbjct: 89 SEMEMMKMIGKHKNIIHLLGACTQDG------PLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 137 SED 139
S D
Sbjct: 143 SYD 145
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With
The Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 28 IGEGTYGEVYWAKDVETG 45
IGEG YG+V+ A+D++ G
Sbjct: 19 IGEGAYGKVFKARDLKNG 36
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 28 IGEGTYGEVYWAKDVETG 45
IGEG YG+V+ A+D++ G
Sbjct: 19 IGEGAYGKVFKARDLKNG 36
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 75
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 128
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
N D R ++ +G G YGEVY W K T VA
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 44
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + ++E T G++
Sbjct: 45 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIIIEFMTYGNL 96
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ VS
Sbjct: 97 LDYLRECNRQEVS 109
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 89
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 142
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of
Human Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of
Human Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of
Human Rsk1 Bound To Purvalnol A
Length = 321
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 10/42 (23%), Positives = 25/42 (59%)
Query: 5 GLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGD 46
++ H+ S + + F+L +++G+G++G+V+ + V D
Sbjct: 13 SITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPD 54
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
N D R ++ +G G YGEVY W K T VA
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 44
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + ++E T G++
Sbjct: 45 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIIIEFMTYGNL 96
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ VS
Sbjct: 97 LDYLRECNRQEVS 109
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 99
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 152
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 85
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 138
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 75
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCAK-----LTDDHVQFLIY 128
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 99
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 152
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 75
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 128
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 56
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLV 81
+ L + +GEG GEV A + T + VA +I++E +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE----------NIKKEICI 57
Query: 82 LKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQ 127
K L+ H N+ FYG RR G + + +E C+GG + D ++
Sbjct: 58 NKMLN-HENVVKFYG--HRREGNIQ----YLFLEYCSGGELFDRIE 96
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 98
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 151
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed
With Isoquinoline-5-Sulfonic Acid
(2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed
With (4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With
4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 71
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed
With A- 443654
Length = 351
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 71
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 28 IGEGTYGEVYWAKDVETGDHVA 49
IG G YG VY A+D +G VA
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVA 38
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 18 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 69
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 70 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPP 123
Query: 133 GVSLS 137
G+ S
Sbjct: 124 GLEYS 128
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 71
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit
In Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
In Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In
Complex With Atp-Competitive Inhibitors
Length = 350
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 19 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 70
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 71 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPP 124
Query: 133 GVSLS 137
G+ S
Sbjct: 125 GLEYS 129
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 71
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With
Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 71
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 71
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 27.3 bits (59), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K +ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYA 70
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 27.3 bits (59), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 15 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 66
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 67 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPP 120
Query: 133 GVSLS 137
G+ S
Sbjct: 121 GLEYS 125
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 77
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPP 131
Query: 133 GVSLS 137
G+ S
Sbjct: 132 GLEYS 136
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 118
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPP 172
Query: 133 GVSLS 137
G+ S
Sbjct: 173 GLEYS 177
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 13 DSLRDPRNKFKLQELIGEGTYGEVYWA 39
D+ PR KL++ +G G +GEV+ A
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMA 34
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 28 IGEGTYGEVYWAKDVETGDHVA 49
IG G YG VY A+D +G VA
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVA 33
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 28 IGEGTYGEVYWAKDVETGDHVA 49
IG G YG VY A+D +G VA
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVA 33
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type
Cyclin
Length = 306
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 28 IGEGTYGEVYWAKDVETGDHVA 49
IG G YG VY A+D +G VA
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVA 33
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 13 DSLRDPRNKFKLQELIGEGTYGEVYWA 39
D+ PR KL++ +G G +GEV+ A
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMA 201
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 13 DSLRDPRNKFKLQELIGEGTYGEVYWA 39
D+ PR KL++ +G G +GEV+ A
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMA 207
>pdb|3A4T|A Chain A, Crystal Structure Of Atrm4 From M.Jannaschii With
Sinefungin
pdb|3A4T|B Chain B, Crystal Structure Of Atrm4 From M.Jannaschii With
Sinefungin
pdb|3AJD|A Chain A, Crystal Structure Of Atrm4
Length = 274
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Query: 104 QPEEDQLWFVMELCT--GGSVTDLVQGMKKRGVSLS 137
P ED F++++C GG T L Q MK +G ++
Sbjct: 80 NPREDD--FILDMCAAPGGKTTHLAQLMKNKGTIVA 113
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 22/120 (18%)
Query: 27 LIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IEEEYLVLKDL 85
++G+G++GEV KD T A KD S I E +LK L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN----------KDTSTILREVELLKKL 78
Query: 86 SVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYIL 145
HPNI + + + + V EL TGG + D + K+ SE A I+
Sbjct: 79 D-HPNIMKLFEIL------EDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARII 127
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
IG G YG V A D +TG VA Y L+ +LK +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 84
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-----LTDDHVQFLIY 137
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
N D R ++ +G G YGEVY W K T VA
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 251
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + + E T G++
Sbjct: 252 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIITEFMTYGNL 303
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ VS
Sbjct: 304 LDYLRECNRQEVS 316
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
N D R ++ +G G YGEVY W K T VA
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 44
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + + E T G++
Sbjct: 45 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIITEFMTYGNL 96
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ VS
Sbjct: 97 LDYLRECNRQEVS 109
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
N D R ++ +G G YGEVY W K T VA
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 44
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + + E T G++
Sbjct: 45 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIITEFMTYGNL 96
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ VS
Sbjct: 97 LDYLRECNRQEVS 109
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
N D R ++ +G G YGEVY W K T VA
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 49
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + + E T G++
Sbjct: 50 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIITEFMTYGNL 101
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ VS
Sbjct: 102 LDYLRECNRQEVS 114
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 26.9 bits (58), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQK-----LTDDHVQFLIY 132
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With
Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGD 46
DP ++F+L +++G+G++G+V+ K + D
Sbjct: 23 DP-SQFELLKVLGQGSFGKVFLVKKISGSD 51
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 17 DPRNKFKLQELIGEGTYGEVYWAKDVETGD 46
DP ++F+L +++G+G++G+V+ K + D
Sbjct: 22 DP-SQFELLKVLGQGSFGKVFLVKKISGSD 50
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 22/126 (17%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IEEEY 79
++ + ++G+G++GEV KD T A KD S I E
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN----------KDTSTILREV 72
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
+LK L HPNI + + + + V EL TGG + D + K+ SE
Sbjct: 73 ELLKKLD-HPNIMKLFEIL------EDSSSFYIVGELYTGGELFDEIIKRKR----FSEH 121
Query: 140 QIAYIL 145
A I+
Sbjct: 122 DAARII 127
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 22/126 (17%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IEEEY 79
++ + ++G+G++GEV KD T A KD S I E
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN----------KDTSTILREV 72
Query: 80 LVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSED 139
+LK L HPNI + + + + V EL TGG + D + K+ SE
Sbjct: 73 ELLKKLD-HPNIMKLFEIL------EDSSSFYIVGELYTGGELFDEIIKRKR----FSEH 121
Query: 140 QIAYIL 145
A I+
Sbjct: 122 DAARII 127
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDV 42
PR+K L + +GEG +G+V A+ V
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAV 57
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAKDV 42
PR+K L + +GEG +G+V A+ V
Sbjct: 33 PRDKLTLGKPLGEGAFGQVVMAEAV 57
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With
Protein Kinase Inhibitor Peptide Fragment 5-24
(Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With
Protein Kinase Inhibitor Peptide Fragment 5-24
(Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFA 70
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And
Closed Conformations
Length = 350
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFA 70
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFA 70
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
++D R ++ +G G YGEVY W K T VA
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 42
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + ++E T G++
Sbjct: 43 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIIIEFMTYGNL 94
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ VS
Sbjct: 95 LDYLRECNRQEVS 107
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G++GEV+ +D +TG A V ++ EE + L+
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKK----------------VRLEVFRAEELMACAGLT- 124
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYIL 145
P I YG +R G + MEL GGS+ LV K++G L ED+ Y L
Sbjct: 125 SPRIVPLYG-AVREG-----PWVNIFMELLEGGSLGQLV---KEQGC-LPEDRALYYL 172
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 40/151 (26%)
Query: 10 INIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXX 66
+++D R ++ +G G YGEVY W K T VA
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK--------------- 42
Query: 67 YLVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGS 121
LK+ ++E EE+L V+K++ HPN+ G+ R E + + E T G+
Sbjct: 43 --TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIITEFMTYGN 93
Query: 122 VTDLVQGMKKRGVSLSEDQIAYILYGTVQVD 152
+ D ++ ++ VS +LY Q+
Sbjct: 94 LLDYLRECNRQEVS-----AVVLLYMATQIS 119
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The
N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 26.6 bits (57), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 9/42 (21%), Positives = 25/42 (59%)
Query: 5 GLSRHINIDSLRDPRNKFKLQELIGEGTYGEVYWAKDVETGD 46
++ H+ + ++F+L +++G+G++G+V+ K + D
Sbjct: 9 AITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSD 50
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 17 DPR---NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKD- 72
DP+ N F +L+G+GT+G+V ++ TG + A ++ KD
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV----------IIAKDE 53
Query: 73 -LSIEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ + HP + + L+ Q D+L FVME GG +
Sbjct: 54 VAHTVTESRVLQN-TRHPFLTA-----LKYAFQ-THDRLCFVMEYANGGEL 97
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKD--LSIEE 77
N F +L+G+GT+G+V ++ TG + A ++ KD
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV----------IIAKDEVAHTVT 54
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ + HP + + L+ Q D+L FVME GG +
Sbjct: 55 ESRVLQN-TRHPFLTA-----LKYAFQ-THDRLCFVMEYANGGEL 92
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 19/125 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 77
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQAREPP 131
Query: 133 GVSLS 137
G+ S
Sbjct: 132 GLEYS 136
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKD--LSIEE 77
N F +L+G+GT+G+V ++ TG + A ++ KD
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV----------IIAKDEVAHTVT 57
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ + HP + + L+ Q D+L FVME GG +
Sbjct: 58 ESRVLQN-TRHPFLTA-----LKYAFQ-THDRLCFVMEYANGGEL 95
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 27/118 (22%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G++GEV+ +D +TG A V ++ EE + L+
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKK----------------VRLEVFRAEELMACAGLTS 144
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYIL 145
P I YG +R G + MEL GGS+ LV K++G L ED+ Y L
Sbjct: 145 -PRIVPLYG-AVREG-----PWVNIFMELLEGGSLGQLV---KEQGC-LPEDRALYYL 191
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 26 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 77
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPP 131
Query: 133 GV 134
G+
Sbjct: 132 GL 133
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKD--LSIEE 77
N F +L+G+GT+G+V ++ TG + A ++ KD
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV----------IIAKDEVAHTVT 54
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ + HP + + L+ Q D+L FVME GG +
Sbjct: 55 ESRVLQN-TRHPFLTA-----LKYAFQ-THDRLCFVMEYANGGEL 92
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKD--LSIEE 77
N F +L+G+GT+G+V ++ TG + A ++ KD
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV----------IIAKDEVAHTVT 54
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ + HP + + L+ Q D+L FVME GG +
Sbjct: 55 ESRVLQN-TRHPFLTA-----LKYAFQ-THDRLCFVMEYANGGEL 92
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 76
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 129
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 26.6 bits (57), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 75
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 128
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 76
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 129
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 26.6 bits (57), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 84
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 137
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELR---------LLKHMK- 91
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 144
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++FK E +G GTY VY + TG +VA
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVA 34
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 77
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 78 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 130
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 19/122 (15%)
Query: 18 PRNKFKLQELIGEGTYGEVYWAK----DVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDL 73
PR++ L + +GEG +G+V A+ D + + V KDL
Sbjct: 11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--------KDL 62
Query: 74 S-IEEEYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKR 132
S + E ++K + H NI + G + G L+ ++E + G++ + +Q +
Sbjct: 63 SDLISEMEMMKMIGKHKNIINLLGACTQDG------PLYVIVEYASKGNLREYLQARRPP 116
Query: 133 GV 134
G+
Sbjct: 117 GL 118
>pdb|1VF5|B Chain B, Crystal Structure Of Cytochrome B6f Complex From
M.Laminosus
pdb|1VF5|O Chain O, Crystal Structure Of Cytochrome B6f Complex From
M.Laminosus
pdb|2D2C|B Chain B, Crystal Structure Of Cytochrome B6f Complex With Dbmib
From M. Laminosus
pdb|2D2C|O Chain O, Crystal Structure Of Cytochrome B6f Complex With Dbmib
From M. Laminosus
Length = 160
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 15 LRDPRNKFKLQELIGEGTYGEVYWAKDV 42
L DP+ + KL + +G YGE W D+
Sbjct: 9 LSDPKLRAKLAKGMGHNYYGEPAWPNDL 36
>pdb|2E74|B Chain B, Crystal Structure Of The Cytochrome B6f Complex From
M.Laminosus
pdb|2E75|B Chain B, Crystal Structure Of The Cytochrome B6f Complex With
2-nonyl-4- Hydroxyquinoline N-oxide (nqno) From
M.laminosus
pdb|2E76|B Chain B, Crystal Structure Of The Cytochrome B6f Complex With
Tridecyl- Stigmatellin (Tds) From M.Laminosus
pdb|4H0L|B Chain B, Cytochrome B6f Complex Crystal Structure From
Mastigocladus Laminosus With N-side Inhibitor Nqno
pdb|4H13|B Chain B, Crystal Structure Of The Cytochrome B6f Complex From
Mastigocladus Laminosus With Tds
Length = 160
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 15 LRDPRNKFKLQELIGEGTYGEVYWAKDV 42
L DP+ + KL + +G YGE W D+
Sbjct: 9 LSDPKLRAKLAKGMGHNYYGEPAWPNDL 36
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 84
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 137
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
N D R ++ +G G YGEVY W K T VA
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 49
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + ++E T G++
Sbjct: 50 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIIIEFMTYGNL 101
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ V+
Sbjct: 102 LDYLRECNRQEVN 114
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 78
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 131
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 90
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-----LTDDHVQFLIY 143
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 26.2 bits (56), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 86
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 139
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Query: 22 FKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLS-IEEEYL 80
++L E IG G + +V A + TG+ VA DL I+ E
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG-----------SDLPRIKTEIE 60
Query: 81 VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLV 126
LK+L H +I Y + ++++ V+E C GG + D +
Sbjct: 61 ALKNLR-HQHICQLYHVL------ETANKIFMVLEYCPGGELFDYI 99
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKD--LSIEE 77
N F +L+G+GT+G+V ++ TG + A ++ KD
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV----------IIAKDEVAHTVT 54
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ + HP + + L+ Q D+L FVME GG +
Sbjct: 55 ESRVLQN-TRHPFLTA-----LKYAFQ-THDRLCFVMEYANGGEL 92
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 81
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 134
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 99
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 152
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 102
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 155
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 86
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 139
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 86
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 139
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 98
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 151
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific
Isoform Of Protein Kinase A (pka) Catalytic Subunit
Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific
Isoform Of Protein Kinase A (pka) Catalytic Subunit
Calpha 2
Length = 343
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYA 63
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 91
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 144
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 102
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 155
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific
Isoform Of Protein Kinase A (pka) Catalytic Subunit C
Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific
Isoform Of Protein Kinase A (pka) Catalytic Subunit C
Alpha 2
Length = 343
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYA 63
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 91
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 144
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 85
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 138
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 85
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 138
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 90
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 143
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 81
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 134
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 26.2 bits (56), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYA 91
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 85
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-----LTDDHVQFLIY 138
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 35/133 (26%)
Query: 11 NIDSLRDPRNKFKLQELIGEGTYGEVY---WAKDVETGDHVAXXXXXXXXXXXXXXXXXY 67
N D R ++ +G G YGEVY W K T VA
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVK---------------- 45
Query: 68 LVLKDLSIE-EEYL----VLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
LK+ ++E EE+L V+K++ HPN+ G+ R E + ++E T G++
Sbjct: 46 -TLKEDTMEVEEFLKEAAVMKEIK-HPNLVQLLGVCTR------EPPFYIIIEFMTYGNL 97
Query: 123 TDLVQGMKKRGVS 135
D ++ ++ V+
Sbjct: 98 LDYLRECNRQEVN 110
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y E +LK +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY---------RELRLLKHMK- 86
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 139
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 132
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 84
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-----LTDDHVQFLIY 137
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 81
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK-----LTDDHVQFLIY 134
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With
Phenol
Length = 351
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYA 71
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 81
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQK-----LTDDHVQFLIY 134
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYA 71
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYL 80
K++L + +G+G YG V+ + D TG+ VA + E +
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF---------REIM 60
Query: 81 VLKDLSVHPNI 91
+L +LS H NI
Sbjct: 61 ILTELSGHENI 71
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK-----LTDDHVQFLIY 132
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 28 IGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKDLSIEEEYLVLKDLSV 87
+G G YG V A D +TG VA Y L+ +LK +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR---------LLKHMK- 79
Query: 88 HPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSVTDLVQGMKKRGVSLSEDQIAYILY 146
H N+ ++ E + ++ V L G + ++V+ K L++D + +++Y
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK-----LTDDHVQFLIY 132
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes
For Pka Inhibitor H-89
Length = 351
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYA 71
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 26.2 bits (56), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++F+ + +G G++G V K ETG+H A
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYA 71
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 20 NKFKLQELIGEGTYGEVYWAKDVETGDHVAXXXXXXXXXXXXXXXXXYLVLKD--LSIEE 77
N F +L+G+GT+G+V ++ TG + A ++ KD
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV----------IIAKDEVAHTVT 54
Query: 78 EYLVLKDLSVHPNIPSFYGLYLRRGGQPEEDQLWFVMELCTGGSV 122
E VL++ + HP + + L+ Q D+L FVME GG +
Sbjct: 55 ESRVLQN-TRHPFLTA-----LKYAFQT-HDRLCFVMEYANGGEL 92
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 21/29 (72%)
Query: 21 KFKLQELIGEGTYGEVYWAKDVETGDHVA 49
++++ ++IG+G++G+V A D + HVA
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVA 126
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.140 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,421,169
Number of Sequences: 62578
Number of extensions: 164667
Number of successful extensions: 1065
Number of sequences better than 100.0: 374
Number of HSP's better than 100.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 168
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 387
length of query: 152
length of database: 14,973,337
effective HSP length: 90
effective length of query: 62
effective length of database: 9,341,317
effective search space: 579161654
effective search space used: 579161654
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)