BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2816
(83 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32LL2|STML2_BOVIN Stomatin-like protein 2 OS=Bos taurus GN=STOML2 PE=2 SV=1
Length = 356
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 66/83 (79%), Positives = 78/83 (93%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
MG++HRILEPGLNILIP++D+I+YVQSLKEI I+VP+QSA+T DNVTL IDGVLYL+I D
Sbjct: 52 MGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGVLYLRIMD 111
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
PY ASYGVEDPE+A+TQLAQTTM
Sbjct: 112 PYKASYGVEDPEYAVTQLAQTTM 134
>sp|Q9UJZ1|STML2_HUMAN Stomatin-like protein 2 OS=Homo sapiens GN=STOML2 PE=1 SV=1
Length = 356
Score = 144 bits (362), Expect = 2e-34, Method: Composition-based stats.
Identities = 66/83 (79%), Positives = 78/83 (93%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
MG++HRILEPGLNILIP++D+I+YVQSLKEI I+VP+QSA+T DNVTL IDGVLYL+I D
Sbjct: 52 MGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGVLYLRIMD 111
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
PY ASYGVEDPE+A+TQLAQTTM
Sbjct: 112 PYKASYGVEDPEYAVTQLAQTTM 134
>sp|Q99JB2|STML2_MOUSE Stomatin-like protein 2 OS=Mus musculus GN=Stoml2 PE=1 SV=1
Length = 353
Score = 143 bits (361), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/83 (78%), Positives = 78/83 (93%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
MG++HRILEPGLN+LIP++D+I+YVQSLKEI I+VP+QSA+T DNVTL IDGVLYL+I D
Sbjct: 52 MGRFHRILEPGLNVLIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGVLYLRIMD 111
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
PY ASYGVEDPE+A+TQLAQTTM
Sbjct: 112 PYKASYGVEDPEYAVTQLAQTTM 134
>sp|Q4FZT0|STML2_RAT Stomatin-like protein 2 OS=Rattus norvegicus GN=Stoml2 PE=1 SV=1
Length = 353
Score = 143 bits (361), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/83 (78%), Positives = 78/83 (93%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
MG++HRILEPGLN+LIP++D+I+YVQSLKEI I+VP+QSA+T DNVTL IDGVLYL+I D
Sbjct: 52 MGRFHRILEPGLNVLIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQIDGVLYLRIMD 111
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
PY ASYGVEDPE+A+TQLAQTTM
Sbjct: 112 PYKASYGVEDPEYAVTQLAQTTM 134
>sp|O60121|YH77_SCHPO Uncharacterized protein C16G5.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC16G5.07c PE=3 SV=1
Length = 354
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 69/83 (83%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
MG++ RIL PG+ L PIIDKI Y+ SLKE A+++P QSAIT DNV+L +DGVLY+++ D
Sbjct: 67 MGRFSRILTPGVAFLAPIIDKIAYIHSLKERALEIPTQSAITLDNVSLGLDGVLYIQVYD 126
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
PY ASYGVED ++AI+QLAQTTM
Sbjct: 127 PYKASYGVEDADYAISQLAQTTM 149
>sp|P72655|Y1128_SYNY3 Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1128 PE=3 SV=1
Length = 321
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
+G Y++ L PGLN +PI+D++ + Q+ +E ID+P QS IT DNV ++ D V+Y +I D
Sbjct: 34 LGSYNKKLTPGLNFTVPILDRVVFKQTTREKVIDIPPQSCITKDNVAITADAVVYWRIID 93
Query: 61 PYLASYGVEDPEFAITQLAQT 81
A Y VE+ + A+ L T
Sbjct: 94 MEKAYYKVENLQSAMVNLVLT 114
>sp|O26788|Y692_METTH Uncharacterized protein MTH_692 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_692 PE=3 SV=1
Length = 318
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
+GKY R +E GL ++IP I+ IK V ++E +DVP Q IT DN + +D V++ ++ D
Sbjct: 33 LGKYQRTVESGLVVIIPFIEAIKKV-DMREQVVDVPPQEVITKDNTVVVVDCVIFYEVVD 91
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
P+ A Y V D AIT+LAQT +
Sbjct: 92 PFNAVYNVVDFYQAITKLAQTNL 114
>sp|P0DKS0|QMCA_WIGBR Protein QmcA OS=Wigglesworthia glossinidia brevipalpis GN=qmcA PE=3
SV=1
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
GKY L PG+N +IP +D+I + ++ E ID+P Q I+ DN ++ID + +++I +
Sbjct: 32 FGKYIETLNPGINFIIPFVDRIGHKINMMERVIDIPSQEIISKDNANVTIDAICFIQITN 91
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
A+Y V + E AI L T M
Sbjct: 92 ANNAAYRVSNLEIAIINLTMTNM 114
>sp|P0AA56|QMCA_SHIFL Protein QmcA OS=Shigella flexneri GN=qmcA PE=3 SV=1
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 2 GKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDP 61
G+Y + L+PGL++++P +D+I ++ E +D+P Q I+ DN ++ID V ++++ D
Sbjct: 35 GRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDA 94
Query: 62 YLASYGVEDPEFAITQLAQTTM 83
A+Y V + E AI L T +
Sbjct: 95 PRAAYEVSNLELAIINLTMTNI 116
>sp|P0AA53|QMCA_ECOLI Protein QmcA OS=Escherichia coli (strain K12) GN=qmcA PE=1 SV=1
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 2 GKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDP 61
G+Y + L+PGL++++P +D+I ++ E +D+P Q I+ DN ++ID V ++++ D
Sbjct: 35 GRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDA 94
Query: 62 YLASYGVEDPEFAITQLAQTTM 83
A+Y V + E AI L T +
Sbjct: 95 PRAAYEVSNLELAIINLTMTNI 116
>sp|P0AA54|QMCA_ECOL6 Protein QmcA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=qmcA PE=3 SV=1
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 2 GKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDP 61
G+Y + L+PGL++++P +D+I ++ E +D+P Q I+ DN ++ID V ++++ D
Sbjct: 35 GRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDA 94
Query: 62 YLASYGVEDPEFAITQLAQTTM 83
A+Y V + E AI L T +
Sbjct: 95 PRAAYEVSNLELAIINLTMTNI 116
>sp|P0AA55|QMCA_ECO57 Protein QmcA OS=Escherichia coli O157:H7 GN=qmcA PE=3 SV=1
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 2 GKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDP 61
G+Y + L+PGL++++P +D+I ++ E +D+P Q I+ DN ++ID V ++++ D
Sbjct: 35 GRYTKTLQPGLSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDA 94
Query: 62 YLASYGVEDPEFAITQLAQTTM 83
A+Y V + E AI L T +
Sbjct: 95 PRAAYEVSNLELAIINLTMTNI 116
>sp|P63694|Y1524_MYCBO Uncharacterized protein Mb1524 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb1524 PE=3 SV=1
Length = 381
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
+G+Y R + L +L+P ID+++ L+E + P Q IT DN+TL+ID V+Y ++
Sbjct: 40 LGRYSRTVSGQLTLLVPFIDRVRARVDLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTV 99
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
P A Y + + + QL TT+
Sbjct: 100 PQAAVYEISNYIVGVEQLTTTTL 122
>sp|P63693|Y1488_MYCTU Uncharacterized protein Rv1488/MT1533.2 OS=Mycobacterium
tuberculosis GN=Rv1488 PE=3 SV=1
Length = 381
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
+G+Y R + L +L+P ID+++ L+E + P Q IT DN+TL+ID V+Y ++
Sbjct: 40 LGRYSRTVSGQLTLLVPFIDRVRARVDLRERVVSFPPQPVITEDNLTLNIDTVVYFQVTV 99
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
P A Y + + + QL TT+
Sbjct: 100 PQAAVYEISNYIVGVEQLTTTTL 122
>sp|O28852|Y1420_ARCFU Uncharacterized protein AF_1420 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_1420 PE=3 SV=1
Length = 249
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PGL +IPI++ + V L+ + DVP Q +T DNVT+ ++ V+Y ++ DP A V
Sbjct: 43 PGLFFIIPILENMVVV-DLRTVTYDVPSQEVVTKDNVTVKVNAVVYYRVVDPAKAVTEVF 101
Query: 70 DPEFAITQLAQTTM 83
D ++A QLAQTT+
Sbjct: 102 DYQYATAQLAQTTL 115
>sp|Q58237|Y827_METJA Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0827 PE=3 SV=1
Length = 199
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
+G+ L+PG+NI+IP +D + ++ D+P Q IT DN + +D V+Y ++ D
Sbjct: 39 LGRVIGKLKPGINIIIPFLD-VPVKVDMRTRVTDIPPQEMITKDNAVVKVDAVVYYRVID 97
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
A VED E+AI LAQTT+
Sbjct: 98 VEKAILEVEDYEYAIINLAQTTL 120
>sp|P54116|STOM_MOUSE Erythrocyte band 7 integral membrane protein OS=Mus musculus
GN=Stom PE=1 SV=3
Length = 284
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 3 KYHRILE-----PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLK 57
+ RIL+ PGL ++P D + V ++ I+ D+P Q +T D+VT+S+DGV+Y +
Sbjct: 67 RLGRILQGGAKGPGLFFILPCTDSLIKV-DMRTISFDIPPQEVLTKDSVTISVDGVVYYR 125
Query: 58 INDPYLASYGVEDPEFAITQLAQTTM 83
+ + LA + + + A LAQTT+
Sbjct: 126 VQNATLAVANITNADSATRLLAQTTL 151
>sp|P27105|STOM_HUMAN Erythrocyte band 7 integral membrane protein OS=Homo sapiens
GN=STOM PE=1 SV=3
Length = 288
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 3 KYHRILE-----PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLK 57
+ RIL+ PGL ++P D V ++ I+ D+P Q +T D+VT+S+DGV+Y +
Sbjct: 67 RLGRILQGGAKGPGLFFILPCTDSFIKVD-MRTISFDIPPQEILTKDSVTISVDGVVYYR 125
Query: 58 INDPYLASYGVEDPEFAITQLAQTTM 83
+ + LA + + + A LAQTT+
Sbjct: 126 VQNATLAVANITNADSATRLLAQTTL 151
>sp|Q22165|STO4_CAEEL Stomatin-4 OS=Caenorhabditis elegans GN=sto-4 PE=3 SV=2
Length = 281
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ +IP I+ K + L+ ++ DVP Q ++ D+VT+S+D V+Y +I++ ++ VE
Sbjct: 75 PGIFFIIPCIESFKKI-DLRVVSFDVPPQEILSKDSVTVSVDAVIYFRISNATVSVINVE 133
Query: 70 DPEFAITQLAQTTM 83
D + LAQTT+
Sbjct: 134 DAARSTKLLAQTTL 147
>sp|Q20657|STO3_CAEEL Stomatin-3 OS=Caenorhabditis elegans GN=sto-3 PE=3 SV=1
Length = 267
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ +++P ID K V L+ ++ DVP Q +T D+VT+ +D +Y + +DP + V
Sbjct: 64 PGIVLVLPFIDSHKTV-DLRVMSYDVPTQEMLTRDSVTIGVDAAVYYRTSDPIASLARVN 122
Query: 70 DPEFAITQLAQTTM 83
D + QLAQ+++
Sbjct: 123 DAHMSTRQLAQSSL 136
>sp|Q9V0Y1|Y658_PYRAB Uncharacterized protein PYRAB06580 OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=PYRAB06580 PE=3 SV=1
Length = 268
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PGL +IPI +K V L+ +DVP Q IT DNV + ++ V+Y ++ DP A V+
Sbjct: 48 PGLFFIIPIFEKAVIV-DLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVK 106
Query: 70 DPEFAITQLAQTTM 83
+ A +Q++QTT+
Sbjct: 107 NYIMATSQISQTTL 120
>sp|O59180|Y1511_PYRHO Uncharacterized protein PH1511 OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=PH1511 PE=1 SV=1
Length = 266
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PGL +IPI +K V L+ +DVP Q IT DNV + ++ V+Y ++ DP A V+
Sbjct: 48 PGLFFIIPIFEKAVIV-DLRTQVLDVPVQETITKDNVPVRVNAVVYFRVVDPVKAVTQVK 106
Query: 70 DPEFAITQLAQTTM 83
+ A +Q++QTT+
Sbjct: 107 NYIMATSQISQTTL 120
>sp|Q21190|UNC1_CAEEL Protein unc-1 OS=Caenorhabditis elegans GN=unc-1 PE=2 SV=2
Length = 285
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ +IP ID + + L+ ++ VP Q ++ D+VT+S+D V+Y + +DP + V+
Sbjct: 80 PGMIFIIPCIDTYRKI-DLRVVSYAVPPQEILSKDSVTVSVDAVVYFRTSDPIASVNNVD 138
Query: 70 DPEFAITQLAQTTM 83
D ++ LAQTT+
Sbjct: 139 DAIYSTKLLAQTTL 152
>sp|Q27433|MEC2_CAEEL Mechanosensory protein 2 OS=Caenorhabditis elegans GN=mec-2 PE=1
SV=1
Length = 481
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ ++P ID + V L+ ++ +VP Q ++ D+VT+++D V+Y +I++ ++ VE
Sbjct: 166 PGIFFIVPCIDTYRKV-DLRVLSFEVPPQEILSKDSVTVAVDAVVYFRISNATISVTNVE 224
Query: 70 DPEFAITQLAQTTM 83
D + LAQTT+
Sbjct: 225 DAARSTKLLAQTTL 238
>sp|Q19200|STO1_CAEEL Stomatin-1 OS=Caenorhabditis elegans GN=sto-1 PE=2 SV=2
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ +IP ID + L+ + +VP Q ++ D+VT+S+D V+Y K+ DP + GV
Sbjct: 88 PGIFFIIPCIDTFLNI-DLRVASYNVPSQEILSRDSVTVSVDAVVYFKVFDPITSVVGVG 146
Query: 70 DPEFAITQLAQTTM 83
+ + LAQTT+
Sbjct: 147 NATDSTKLLAQTTL 160
>sp|Q7PPU9|BND7A_ANOGA Band 7 protein AGAP004871 OS=Anopheles gambiae GN=AGAP004871 PE=3
SV=3
Length = 280
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ ++P ID V L+ DVP Q +T D+VT+S+D V+Y ++++ ++ VE
Sbjct: 69 PGIFFILPCIDAYARV-DLRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVSNATVSIANVE 127
Query: 70 DPEFAITQLAQTTM 83
+ + LAQTT+
Sbjct: 128 NAHHSTRLLAQTTL 141
>sp|Q16TM5|BND7A_AEDAE Band 7 protein AAEL010189 OS=Aedes aegypti GN=AAEL010189 PE=3 SV=1
Length = 297
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ ++P ID V L+ DVP Q +T D+VT+S+D V+Y ++++ ++ VE
Sbjct: 83 PGIFFILPCIDAYARV-DLRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVSNATVSIANVE 141
Query: 70 DPEFAITQLAQTTM 83
+ + LAQTT+
Sbjct: 142 NAHHSTRLLAQTTL 155
>sp|Q9VZA4|BND7A_DROME Band 7 protein CG42540 OS=Drosophila melanogaster GN=CG42540 PE=2
SV=2
Length = 505
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ ++P ID V L+ DVP Q +T D+VT+S+D V+Y ++++ ++ VE
Sbjct: 223 PGIFFILPCIDSYARV-DLRTRTYDVPPQEVLTKDSVTVSVDAVVYYRVSNATVSIANVE 281
Query: 70 DPEFAITQLAQTTM 83
+ + LAQTT+
Sbjct: 282 NAHHSTRLLAQTTL 295
>sp|Q19958|STO2_CAEEL Stomatin-2 OS=Caenorhabditis elegans GN=sto-2 PE=2 SV=4
Length = 375
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ ++P I+ V L+ ++ VP Q +T D+VT S+D V+Y +I++ ++ VE
Sbjct: 173 PGIFFVLPCIESYTKV-DLRTVSFSVPPQEILTKDSVTTSVDAVIYYRISNATVSVANVE 231
Query: 70 DPEFAITQLAQTTM 83
+ + LAQTT+
Sbjct: 232 NAHHSTRLLAQTTL 245
>sp|Q6PE84|STML3_MOUSE Stomatin-like protein 3 OS=Mus musculus GN=Stoml3 PE=2 SV=2
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PGL +++P ID V L+ + ++P Q +T D+VT +DGV+Y +I A V
Sbjct: 72 PGLILVLPCIDVFVKV-DLRTVTCNIPPQEILTRDSVTTQVDGVVYYRIYSAVSAVANVN 130
Query: 70 DPEFAITQLAQTTM 83
D A LAQTT+
Sbjct: 131 DVHQATFLLAQTTL 144
>sp|Q8TAV4|STML3_HUMAN Stomatin-like protein 3 OS=Homo sapiens GN=STOML3 PE=1 SV=1
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PGL +++P ID V L+ + ++P Q +T D+VT +DGV+Y +I A V
Sbjct: 76 PGLILVLPCIDVFVKV-DLRTVTCNIPPQEILTRDSVTTQVDGVVYYRIYSAVSAVANVN 134
Query: 70 DPEFAITQLAQTTM 83
D A LAQTT+
Sbjct: 135 DVHQATFLLAQTTL 148
>sp|O51221|HFLK_BORBU Protein HflK OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP
102532 / DSM 4680) GN=hflK PE=3 SV=1
Length = 311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 1 MGKYHRILEPGLNILIPIIDK-----IKYVQSLKEIAIDVP-----------QQSAITSD 44
+GK +R L+ G+++ IP+I++ +K VQ +K + P + IT D
Sbjct: 46 LGKLNRTLDSGIHVKIPLIEEKFIVPVKIVQEIKFGFLISPSDIRENDNANDESRIITGD 105
Query: 45 NVTLSIDGVLYLKINDPYLASYGVEDPEFAITQLAQTTM 83
++I+ ++ KI DPY + VEDPE I +A+++M
Sbjct: 106 LNIINIEWLVQYKIRDPYSFKFKVEDPETTIKDIAKSSM 144
>sp|Q9UBI4|STML1_HUMAN Stomatin-like protein 1 OS=Homo sapiens GN=STOML1 PE=2 SV=1
Length = 398
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PG+ +L+P ID + V L+ A +VP + D LS+ + +I DP L+ V+
Sbjct: 102 PGMVLLLPFIDSFQRV-DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVMTVK 160
Query: 70 DPEFAITQLAQTTM 83
D A AQ M
Sbjct: 161 DLNTATRMTAQNAM 174
>sp|Q8CI66|STML1_MOUSE Stomatin-like protein 1 OS=Mus musculus GN=Stoml1 PE=2 SV=1
Length = 399
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
+G+ PG+ +L+P ID + V L+ A +VP + D LS+ + +I D
Sbjct: 93 LGRIRNPQGPGMVLLLPFIDSFQRV-DLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWD 151
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
P L+ V+D A A M
Sbjct: 152 PVLSVMAVKDLNTATRMTAHNAM 174
>sp|O83151|HFLK_TREPA Protein HflK OS=Treponema pallidum (strain Nichols) GN=hflK PE=3
SV=1
Length = 328
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 18/90 (20%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLK----EIAIDVPQQSA--------------IT 42
GKYHR LEPGL+ LIP ++ + V K E + S +T
Sbjct: 47 FGKYHRTLEPGLHYLIPFVEWVYKVPVTKVQKEEFGFRTSKSSEQSHYVNNISHESLMLT 106
Query: 43 SDNVTLSIDGVLYLKINDPYLASYGVEDPE 72
D + ++ V+ +I DP + VE E
Sbjct: 107 GDLNIVDVEWVVQYRIVDPRAWVFNVESQE 136
>sp|Q8K4G9|PODO_RAT Podocin OS=Rattus norvegicus GN=Nphs2 PE=1 SV=2
Length = 383
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PGL +P +D V L+ +++P +T D + ID V Y ++ + L +
Sbjct: 150 PGLFFFLPCLDTYHKV-DLRLQTLEIPFHEVVTKDMFIMEIDAVCYYRMENASLLLSSLA 208
Query: 70 DPEFAITQLAQTTM 83
AI L QTTM
Sbjct: 209 HVSKAIQFLVQTTM 222
>sp|Q91X05|PODO_MOUSE Podocin OS=Mus musculus GN=Nphs2 PE=1 SV=2
Length = 385
Score = 35.8 bits (81), Expect = 0.069, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PGL +P +D V L+ +++P +T D + ID V Y ++ + L +
Sbjct: 152 PGLFFFLPCLDTYHKV-DLRLQTLEIPFHEVVTKDMFIMEIDAVCYYRMENASLLLSSLA 210
Query: 70 DPEFAITQLAQTTM 83
AI L QTTM
Sbjct: 211 HVSKAIQFLVQTTM 224
>sp|Q5UP73|YR614_MIMIV Putative band 7 family protein R614 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_R614 PE=3 SV=1
Length = 303
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 1 MGKYHRILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND 60
G+ R + G++ + P+ + I V ++ ID+ ++ +TSD +++ ID V+Y ++ +
Sbjct: 83 FGRVKREINDGMHYVNPVTESISQVD-MRIKVIDLDKKDVMTSDKLSIKIDSVVYYQVTN 141
Query: 61 PYLASYGVEDPEFAITQLAQTTM 83
+ A + +++ +I +L+ T+
Sbjct: 142 IHDALFKIDNVVQSIIELSYATL 164
>sp|Q89A40|HFLC_BUCBP Protein HflC OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=hflC PE=3 SV=1
Length = 326
Score = 35.4 bits (80), Expect = 0.090, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 7 ILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND--PYLA 64
+ +PGL+I +P I+ +K S K ID S +T DN L ++ + KIND Y
Sbjct: 47 VYKPGLHIKLPFIESVKIFNS-KIQTIDNRLDSVLTKDNKNLVLNTYINWKINDFCRYYL 105
Query: 65 SYGVEDPEFAITQLAQ 80
S G ++ +A T + Q
Sbjct: 106 STGEDNIYYAETLIKQ 121
>sp|Q9KV09|HFLK_VIBCH Protein HflK OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El
Tor Inaba N16961) GN=hflK PE=3 SV=1
Length = 395
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 1 MGKYHRILEPGLNILIPIIDK-----IKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLY 55
+GKY RI++PGLN ID+ ++ ++SL+ + + + + VT+S+D +
Sbjct: 101 LGKYDRIVDPGLNWRPRFIDEVTPVNVQAIRSLRASGLMLTKDENV----VTVSMD--VQ 154
Query: 56 LKINDPYLASYGVEDPEFAITQLAQTTM 83
+I DPY Y V + + ++ Q + +
Sbjct: 155 YRIADPYKYLYRVTNADDSLRQATDSAL 182
>sp|P0ABC7|HFLK_ECOLI Modulator of FtsH protease HflK OS=Escherichia coli (strain K12)
GN=hflK PE=1 SV=1
Length = 419
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 2 GKYHRILEPGLNILIPIIDKIK--YVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIN 59
GK+ ++EPGLN ID++K V++++E+A +TSD + ++ + ++
Sbjct: 112 GKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELA---ASGVMLTSDENVVRVEMNVQYRVT 168
Query: 60 DPYLASYGVEDPEFAITQLAQTTM 83
+P Y V P+ ++ Q + +
Sbjct: 169 NPEKYLYSVTSPDDSLRQATDSAL 192
>sp|P0ABC8|HFLK_ECO57 Protein HflK OS=Escherichia coli O157:H7 GN=hflK PE=3 SV=1
Length = 419
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 2 GKYHRILEPGLNILIPIIDKIK--YVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIN 59
GK+ ++EPGLN ID++K V++++E+A +TSD + ++ + ++
Sbjct: 112 GKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELA---ASGVMLTSDENVVRVEMNVQYRVT 168
Query: 60 DPYLASYGVEDPEFAITQLAQTTM 83
+P Y V P+ ++ Q + +
Sbjct: 169 NPEKYLYSVTSPDDSLRQATDSAL 192
>sp|Q9NP85|PODO_HUMAN Podocin OS=Homo sapiens GN=NPHS2 PE=1 SV=1
Length = 383
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 10 PGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKINDPYLASYGVE 69
PGL +P +D V L+ +++P +T D + ID + Y ++ + L +
Sbjct: 150 PGLFFFLPCLDTYHKV-DLRLQTLEIPFHEIVTKDMFIMEIDAICYYRMENASLLLSSLA 208
Query: 70 DPEFAITQLAQTTM 83
A+ L QTTM
Sbjct: 209 HVSKAVQFLVQTTM 222
>sp|P40605|HFLK_VIBPA Protein HflK OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD
2210633) GN=hflK PE=3 SV=1
Length = 400
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 1 MGKYHRILEPGLNILIPIIDK-----IKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLY 55
+GKY RI++PGLN ID+ ++ ++SL+ + + + + VT+++D +
Sbjct: 104 LGKYDRIVDPGLNWRPRFIDEYEAVNVQAIRSLRASGLMLTKDENV----VTVAMD--VQ 157
Query: 56 LKINDPYLASYGVEDPEFAITQLAQTTM 83
++ DPY Y V + + ++ Q + +
Sbjct: 158 YRVADPYKYLYRVTNADDSLRQATDSAL 185
>sp|P44546|HFLK_HAEIN Protein HflK OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=hflK PE=3 SV=1
Length = 410
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 1 MGKYHRILEPGLNILIPIIDKI--KYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKI 58
G+ H I++PGLN +DK+ V+ +KE+ Q + +T D + ++ + ++
Sbjct: 118 FGELHSIVQPGLNWKPTFVDKVLPVNVEQVKELRT---QGAMLTQDENMVKVEMTVQYRV 174
Query: 59 NDPYLASYGVEDPEFAITQLAQTTM 83
DP + V + + ++ Q + +
Sbjct: 175 QDPAKYLFSVTNADDSLNQATDSAL 199
>sp|Q8K914|HFLK_BUCAP Protein HflK OS=Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg) GN=hflK PE=3 SV=1
Length = 411
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 2 GKYHRILEPGLNILIPIIDKIKY--VQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIN 59
GK+ ++ PGLN I+++K V++++E+A +TSD + ++ + KI
Sbjct: 103 GKFSHLVAPGLNWRPVFINEVKAVNVETVRELAT---SGVMLTSDENVVRVEMNVQYKIT 159
Query: 60 DPYLASYGVEDPEFAITQLAQTTM 83
DP + V P+ ++ Q + +
Sbjct: 160 DPADYLFSVAYPDDSLRQATDSAL 183
>sp|P40606|HFLC_VIBPA Protein HflC OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD
2210633) GN=hflC PE=3 SV=1
Length = 326
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 6 RILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND---PY 62
RI EPGL+ +P+ D++K + + + +D +TS+ + ID + +I D Y
Sbjct: 46 RIYEPGLHFKMPLFDRVKQLDARIQ-TMDGRADRFVTSEKKDVIIDSYVKWRIEDFGRYY 104
Query: 63 LASYG 67
LA+ G
Sbjct: 105 LATGG 109
>sp|Q9CJ92|DTD_LACLA D-tyrosyl-tRNA(Tyr) deacylase OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=dtd PE=3 SV=1
Length = 151
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
Query: 45 NVTLSIDGVLYLKINDPYLASYGVEDP------EFAITQLAQ 80
+ ++SIDGV+ KIN +L GVED ++A+ ++AQ
Sbjct: 10 SASVSIDGVIKGKINQGFLLLVGVEDADSNFDLDYAVRKIAQ 51
>sp|Q9KV08|HFLC_VIBCH Protein HflC OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El
Tor Inaba N16961) GN=hflC PE=3 SV=1
Length = 326
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 6 RILEPGLNILIPIIDKIKYVQSLKEIAIDVPQQSAITSDNVTLSIDGVLYLKIND---PY 62
RI EPGL+ +P+ D++K + + + +D +TS+ + ID + +I D Y
Sbjct: 46 RIYEPGLHFKMPLFDRVKTLDARIQ-TMDGRSDRFVTSEKKDVIIDTYVKWRIEDFGQYY 104
Query: 63 LASYG 67
LA+ G
Sbjct: 105 LATGG 109
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,827,839
Number of Sequences: 539616
Number of extensions: 918343
Number of successful extensions: 2984
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2937
Number of HSP's gapped (non-prelim): 53
length of query: 83
length of database: 191,569,459
effective HSP length: 54
effective length of query: 29
effective length of database: 162,430,195
effective search space: 4710475655
effective search space used: 4710475655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)