Diaphorina citri psyllid: psy281


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160--
MNPGGDVLENINPTLYSKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERVAAALENSTLIGVINQCISRPSPAA
cccccccccccccEEEccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHcccccEEEcccccEEEEEEECcccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHcHHHHHHHHHccHHHHHHHHHHHccccccc
****GDV*ENINPTLY****************ITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERVAAALENSTLIGVINQCISRP****
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MNPGGDVLENINPTLYSKCEDRPVTAEDQNDYITDEFDSREIFDLIRNIYDPEHPLTLEELHVVDLSLIQVNNETNQIKVNFTPTIPHCSMATLIGLSIRVRLIRALPARFKVVVEITPGSHSTEFAINKQLADKERVAAALENSTLIGVINQCISRPSPAA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
MIP18 family protein CG7949 May play a role in chromosome segregation through establishment of sister chromatid cohesion.very confidentQ9VTC4
Mitotic spindle-associated MMXD complex subunit MIP18 As part of the mitotic spindle-associated MMXD complex it plays a role in chromosome segregation.very confidentQ9Y3D0
MIP18 family protein At1g68310 May play a role in chromosome segregation through establishment of sister chromatid cohesion.very confidentQ9C9G6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044699 [BP]single-organism processconfidentGO:0008150
GO:0005730 [CC]nucleolusconfidentGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0071817 [CC]MMXD complexconfidentGO:0043234, GO:0005856, GO:0005819, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044422, GO:0044424, GO:0043228, GO:0043226, GO:0015630
GO:0010209 [MF]vacuolar sorting signal bindingconfidentGO:0033218, GO:0003674, GO:0042277, GO:0005048, GO:0005488
GO:0097361 [CC]CIA complexconfidentGO:0043234, GO:0005737, GO:0032991, GO:0005829, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044445, GO:0044424
GO:0009944 [BP]polarity specification of adaxial/abaxial axisprobableGO:0032502, GO:0007389, GO:0009955, GO:0009943, GO:0044707, GO:0065001, GO:0032501, GO:0008150, GO:0003002, GO:0009798, GO:0007275, GO:0044699
GO:0042127 [BP]regulation of cell proliferationprobableGO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0051726 [BP]regulation of cell cycleprobableGO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0034087 [BP]establishment of mitotic sister chromatid cohesionprobableGO:0006996, GO:0000070, GO:0034085, GO:0051276, GO:0000280, GO:0000819, GO:0000278, GO:0009987, GO:0044763, GO:0016043, GO:0008150, GO:0022402, GO:0044699, GO:0007059, GO:0071840, GO:0007064, GO:0007067, GO:0048285, GO:0007049, GO:0007062
GO:0046872 [MF]metal ion bindingprobableGO:0043169, GO:0003674, GO:0005488, GO:0043167

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3UX2, chain A
Confidence level:very confident
Coverage over the Query: 38-156
View the alignment between query and template
View the model in PyMOL