RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy282
(233 letters)
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 81.1 bits (199), Expect = 2e-19
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Query: 3 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 62
LE+E DY Y+ C + K K++ + + L K GP+SV +N+
Sbjct: 81 LETEDDYSYQGHMQ---SCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAF 137
Query: 63 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER 122
+ Y R CSP+ + HAVLLVGYG++ D+P+W ++NSWG ++G++ + R
Sbjct: 138 GMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHR 197
Query: 123 GNNACG 128
G+ ACG
Sbjct: 198 GSGACG 203
Score = 65.7 bits (159), Expect = 8e-14
Identities = 32/99 (32%), Positives = 52/99 (52%)
Query: 118 FKIERGNNACGKDFLHFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPY 177
F E+ + + L K GP+SV +N+ + FY R CSP+
Sbjct: 98 FSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPW 157
Query: 178 DLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIE 216
+ HAVLLVGYG++ D+P+W ++NSWG ++G++ +
Sbjct: 158 LIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLH 196
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 81.9 bits (201), Expect = 2e-19
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Query: 6 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDL 63
E D P + E + K + + N + + +YK GP+ + SD
Sbjct: 123 EGDTPKCSKICEPGYS-PTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDF 181
Query: 64 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG 123
+ +G GHA+ ++G+G ++ PYWLV NSW D GFFKI RG
Sbjct: 182 LLYKSGVYQHV----TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRG 237
Query: 124 NNACG 128
+ CG
Sbjct: 238 QDHCG 242
Score = 66.1 bits (160), Expect = 1e-13
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 116 GFFKIERGNNACGKDFLHFNGSET-MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETC 174
G+ + + G + + SE + +YK GP+ + + + + ++
Sbjct: 136 GYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHV--T 193
Query: 175 SPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIE 216
GHA+ ++G+G ++ PYWLV NSW D GFFKI
Sbjct: 194 GEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKIL 235
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 81.3 bits (199), Expect = 5e-19
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 2/140 (1%)
Query: 1 MGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 60
+ E D + +FK + L+ D+ +G E M +Y GP+S +
Sbjct: 130 QAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGI- 188
Query: 61 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKI 120
E + H V + G+G D YW+VRNSWG + G+ +I
Sbjct: 189 -MATERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRI 247
Query: 121 ERGNNACGKDFLHFNGSETM 140
GK + E
Sbjct: 248 VTSTYKDGKGARYNLAIEEH 267
Score = 67.4 bits (163), Expect = 5e-14
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 129 KDFLHFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY 188
D+ +G E M +Y GP+S G+ + I + + + H V + G+
Sbjct: 163 GDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAEYQDTTYIN--HVVSVAGW 220
Query: 189 GKQDDIPYWLVRNSWGPIGPDEGFFKI 215
G D YW+VRNSWG + G+ +I
Sbjct: 221 GISDGTEYWIVRNSWGEPWGERGWLRI 247
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 80.4 bits (197), Expect = 2e-18
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 3 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 62
L+SE+ YPY + C Y+ + + K + GP+SV +++
Sbjct: 179 LDSEESYPY---EATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAG 235
Query: 63 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG----KQDDIPYWLVRNSWGPIGPDEGFF 118
+ CS D+ H VL+VGYG + D+ YWLV+NSWG G+
Sbjct: 236 HESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV 295
Query: 119 KIERG-NNACG 128
K+ + N CG
Sbjct: 296 KMAKDRRNHCG 306
Score = 73.1 bits (178), Expect = 6e-16
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 108 WGPIGPDEGFFKIERGNNACGKDFLHFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPI 167
+ + + + + K + GP+SV +++ F
Sbjct: 186 PYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEG 245
Query: 168 RKNDETCSPYDLGHAVLLVGYG----KQDDIPYWLVRNSWGPIGPDEGFFKIE 216
+ CS D+ H VL+VGYG + D+ YWLV+NSWG G+ K+
Sbjct: 246 IYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMA 298
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 76.2 bits (186), Expect = 1e-17
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 3 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 62
++SE YPY + K G + + +K+ + + GP+SV +++
Sbjct: 81 IDSEDAYPYVGQE--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDAS 138
Query: 63 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER 122
L + DE+C+ +L HAVL VGYG Q +W+++NSWG ++G+ + R
Sbjct: 139 LTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 198
Query: 123 G-NNACG 128
NNACG
Sbjct: 199 NKNNACG 205
Score = 65.0 bits (157), Expect = 2e-13
Identities = 27/99 (27%), Positives = 51/99 (51%)
Query: 117 FFKIERGNNACGKDFLHFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSP 176
+ + G + + +K+ + + GP+SV +++ L F + DE+C+
Sbjct: 98 YNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNS 157
Query: 177 YDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKI 215
+L HAVL VGYG Q +W+++NSWG ++G+ +
Sbjct: 158 DNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILM 196
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 77.4 bits (189), Expect = 1e-17
Identities = 20/128 (15%), Positives = 36/128 (28%), Gaps = 1/128 (0%)
Query: 1 MGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 60
G+ E Y Y + + + + + N + + + +
Sbjct: 163 NGVVQESYYRYVAREQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIK 222
Query: 61 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKI 120
+ HAV +VGY + YW+VRNSW D G+
Sbjct: 223 DLDAFRHYD-GRTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYF 281
Query: 121 ERGNNACG 128
+
Sbjct: 282 AANIDLMM 289
Score = 62.8 bits (151), Expect = 2e-12
Identities = 17/60 (28%), Positives = 22/60 (36%)
Query: 157 HLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIE 216
L F + HAV +VGY + YW+VRNSW D G+
Sbjct: 223 DLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFA 282
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 76.5 bits (187), Expect = 1e-17
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 1 MGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 60
G+ E YPYK + + + N E M + + Y P+S
Sbjct: 90 KGIMGEDTYPYKGQDDHCKFQPDKA--IAFVKDVANITMNDEEAMVEAVALYNPVSFAFE 147
Query: 61 S-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFK 119
+ Y +P + HAVL VGYG+++ IPYW+V+NSWGP G+F
Sbjct: 148 VTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFL 207
Query: 120 IERGNNACG 128
IERG N CG
Sbjct: 208 IERGKNMCG 216
Score = 60.0 bits (144), Expect = 1e-11
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 133 HFNGSETMKKILYKYGPLSVGLNSHL-IHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 191
N E M + + Y P+S Y +P + HAVL VGYG++
Sbjct: 125 TMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEE 184
Query: 192 DDIPYWLVRNSWGPIGPDEGFFKIE 216
+ IPYW+V+NSWGP G+F IE
Sbjct: 185 NGIPYWIVKNSWGPQWGMNGYFLIE 209
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 75.8 bits (185), Expect = 2e-17
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 2 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 61
+ +E YPY + G C V + L GP++V +++
Sbjct: 82 AVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDA 141
Query: 62 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIE 121
Y G + C L H VLLVGY +PYW+++NSW +EG+ +I
Sbjct: 142 SSWMTYTGGVMTS----CVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIA 197
Query: 122 RGNNACG 128
+G+N C
Sbjct: 198 KGSNQCL 204
Score = 55.0 bits (131), Expect = 6e-10
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 135 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI 194
+ L GP++V +++ Y G + C L H VLLVGY +
Sbjct: 120 QDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS----CVSEQLDHGVLLVGYNDSAAV 175
Query: 195 PYWLVRNSWGPIGPDEGFFKIE 216
PYW+++NSW +EG+ +I
Sbjct: 176 PYWIIKNSWTTQWGEEGYIRIA 197
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 70.4 bits (171), Expect = 2e-15
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 1 MGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 60
G++S+ YPYK + + K + + L + + +K+ + GP+SV ++
Sbjct: 82 KGIDSDASYPYKAMD--QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVD 139
Query: 61 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKI 120
+ + + +C+ ++ H VL+VGYG + YWLV+NSWG +EG+ ++
Sbjct: 140 ARHPSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRM 198
Query: 121 ERG-NNACG 128
R N CG
Sbjct: 199 ARNKGNHCG 207
Score = 60.0 bits (144), Expect = 1e-11
Identities = 25/76 (32%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 140 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLV 199
+K+ + GP+SVG+++ F+ + +C+ ++ H VL+VGYG + YWLV
Sbjct: 124 LKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQ-NVNHGVLVVGYGDLNGKEYWLV 182
Query: 200 RNSWGPIGPDEGFFKI 215
+NSWG +EG+ ++
Sbjct: 183 KNSWGHNFGEEGYIRM 198
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 70.4 bits (171), Expect = 2e-15
Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 6/130 (4%)
Query: 5 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 64
+ Y ++ + + + + F MK L +GP++V
Sbjct: 90 ACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDD 149
Query: 65 HDYNGTPIRKND----ETCSPYDLGHAVLLVGYG--KQDDIPYWLVRNSWGPIGPDEGFF 118
+ I + HAVLLVGYG + YW+V+NSWG + G+F
Sbjct: 150 FLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYF 209
Query: 119 KIERGNNACG 128
+I RG + C
Sbjct: 210 RIRRGTDECA 219
Score = 63.1 bits (152), Expect = 1e-12
Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 93 YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGKDFLHFNGSETMKKILYKYGPLSV 152
+ + + P E F+ F MK L +GP++V
Sbjct: 83 DFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAV 142
Query: 153 GLNSHLIHFYNGTPIRKND----ETCSPYDLGHAVLLVGYG--KQDDIPYWLVRNSWGPI 206
+ + I + HAVLLVGYG + YW+V+NSWG
Sbjct: 143 AFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTG 202
Query: 207 GPDEGFFKIE 216
+ G+F+I
Sbjct: 203 WGENGYFRIR 212
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 66.2 bits (160), Expect = 6e-14
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 3 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 62
+ +E++YPY +GE ++ V + T ++ +E + Y P+SV D
Sbjct: 83 INTEENYPYTAQDGECNVDLQNEKYVTIDTYEN--VPYNNEWALQTAVTYQPVSV--ALD 138
Query: 63 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER 122
D + HAV +VGYG + I YW+V+NSW +EG+ +I R
Sbjct: 139 AAGDAFKQYSSGIFTGPCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILR 198
Query: 123 ---GNNACG 128
G CG
Sbjct: 199 NVGGAGTCG 207
Score = 55.4 bits (132), Expect = 4e-10
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 2/141 (1%)
Query: 75 NDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGKDFLHF 134
+ + G+ + + + +
Sbjct: 58 RTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVP 117
Query: 135 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDI 194
+E + Y P+SV L++ F + + HAV +VGYG + I
Sbjct: 118 YNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTG--PCGTAIDHAVTIVGYGTEGGI 175
Query: 195 PYWLVRNSWGPIGPDEGFFKI 215
YW+V+NSW +EG+ +I
Sbjct: 176 DYWIVKNSWDTTWGEEGYMRI 196
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 63.8 bits (154), Expect = 5e-13
Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 8/127 (6%)
Query: 6 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 65
K YPY+ + TG + N + L ++
Sbjct: 83 SKVYPYQAKQYKCRAT-DKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPF 141
Query: 66 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERG-- 123
+ + L HAV VGYG D Y +++NSWGP ++G+ +++R
Sbjct: 142 QLYKSGVFDG---PCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSG 198
Query: 124 --NNACG 128
CG
Sbjct: 199 NSQGTCG 205
Score = 58.4 bits (140), Expect = 3e-11
Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 3/152 (1%)
Query: 65 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGN 124
+ + + D+ G+ + Y + + V K
Sbjct: 46 LELSEQELVDCDKHSYGCKGGYQTTSLQYVANNGVHTSKVYPYQAKQYKCRATDKPGPKV 105
Query: 125 NACGKDFLHFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVL 184
G + N + L PLSV + + F + L HAV
Sbjct: 106 KITGYKRVPSNCETSFLGAL-ANQPLSVLVEAGGKPFQL--YKSGVFDGPCGTKLDHAVT 162
Query: 185 LVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIE 216
VGYG D Y +++NSWGP ++G+ +++
Sbjct: 163 AVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLK 194
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 60.8 bits (146), Expect = 7e-12
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 2 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 61
G+ SE+ YPY+ G+ C + + + +E + P+SV +++
Sbjct: 80 GINSEETYPYR---GQDGICNSTVNAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDA 136
Query: 62 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIE 121
HA+ +VGYG ++D +W+V+NSWG + G+ + E
Sbjct: 137 AGRDFQLYRSGIFTG--SCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAE 194
Query: 122 RG----NNACG 128
R + CG
Sbjct: 195 RNIENPDGKCG 205
Score = 51.2 bits (121), Expect = 2e-08
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 133 HFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 192
+ +E + P+SV +++ F HA+ +VGYG ++
Sbjct: 113 VPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTG--SCNISANHALTVVGYGTEN 170
Query: 193 DIPYWLVRNSWGPIGPDEGFFKIE 216
D +W+V+NSWG + G+ + E
Sbjct: 171 DKDFWIVKNSWGKNWGESGYIRAE 194
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 59.2 bits (142), Expect = 2e-11
Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 5/129 (3%)
Query: 1 MGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 60
G+ YPYK G VK N + I + + V
Sbjct: 78 NGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESK 137
Query: 61 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKI 120
Y G E + HAV VGYGK Y L++NSWG ++G+ +I
Sbjct: 138 GRPFQLYKGGIF----EGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRI 193
Query: 121 ERG-NNACG 128
+R N+ G
Sbjct: 194 KRAPGNSPG 202
Score = 52.7 bits (125), Expect = 4e-09
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 140 MKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLV 199
P+SV + S F + HAV VGYGK Y L+
Sbjct: 120 NLLNAIAKQPVSVVVESKGRPFQLYKGGIFEG--PCGTKVDHAVTAVGYGKSGGKGYILI 177
Query: 200 RNSWGPIGPDEGFFKIE 216
+NSWG ++G+ +I+
Sbjct: 178 KNSWGTAWGEKGYIRIK 194
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 58.8 bits (141), Expect = 3e-11
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Query: 3 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 62
+ +E +YPY+ +G + V + ++ + + +K + + +++
Sbjct: 83 ITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGS 142
Query: 63 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD-IPYWLVRNSWGPIGPDEGFFKIE 121
Y+ +L H V +VGYG D YW V+NSWGP ++G+ ++E
Sbjct: 143 DFQFYSEGVFTG----SCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRME 198
Query: 122 RG----NNACG 128
RG CG
Sbjct: 199 RGISDKEGLCG 209
Score = 50.0 bits (118), Expect = 3e-08
Identities = 27/143 (18%), Positives = 46/143 (32%), Gaps = 3/143 (2%)
Query: 75 NDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGKDFLHF 134
+ + + G + KQ + K +
Sbjct: 58 DTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVSKENAPAVSIDGHENVP 117
Query: 135 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDD- 193
E P+SV +++ F + +L H V +VGYG D
Sbjct: 118 ENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG--SCGTELDHGVAIVGYGTTIDG 175
Query: 194 IPYWLVRNSWGPIGPDEGFFKIE 216
YW V+NSWGP ++G+ ++E
Sbjct: 176 TKYWTVKNSWGPEWGEKGYIRME 198
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 58.1 bits (139), Expect = 5e-11
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 7/131 (5%)
Query: 3 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS--VLLN 60
L+SE+ YPY ++ ++ V TG + + + K + GP+S +
Sbjct: 83 LDSEESYPYVAV--DEICKYRPENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAG 140
Query: 61 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY--GKQDDIPYWLVRNSWGPIGPDEGFF 118
Y + D + D G V+ G+ D+ YWLV+NSWGP G+
Sbjct: 141 HSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYV 200
Query: 119 KIERG-NNACG 128
KI + NN CG
Sbjct: 201 KIAKDKNNHCG 211
Score = 47.3 bits (111), Expect = 3e-07
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 135 NGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGY----GK 190
+ + K + GP+SV +++ F + CS +L H VL+VGY
Sbjct: 118 GKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGAN 177
Query: 191 QDDIPYWLVRNSWGPIGPDEGFFKIE 216
D+ YWLV+NSWGP G+ KI
Sbjct: 178 SDNSKYWLVKNSWGPEWGSNGYVKIA 203
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 57.0 bits (136), Expect = 1e-10
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 3 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 62
++++++YPY + + C + +V G + N ++ + + +
Sbjct: 81 IDTQQNYPY---SAVQGSCKPYRLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAG 137
Query: 63 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIER 122
+ + I + H V++VGYG Q YW+VRNSWG ++G+ +ER
Sbjct: 138 APFQHYSSGIFTGPCGTAQN---HGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMER 194
Query: 123 G----NNACG 128
CG
Sbjct: 195 NVASSAGLCG 204
Score = 49.6 bits (117), Expect = 4e-08
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 133 HFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 192
+E+ + P+SV + + F + + H V++VGYG Q
Sbjct: 112 VTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTG--PCGTAQNHGVVIVGYGTQS 169
Query: 193 DIPYWLVRNSWGPIGPDEGFFKIE 216
YW+VRNSWG ++G+ +E
Sbjct: 170 GKNYWIVRNSWGQNWGNQGYIWME 193
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 55.0 bits (131), Expect = 6e-10
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 13/129 (10%)
Query: 2 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 61
G++++ +YPYK G C KV G + + F +K+ + + S
Sbjct: 80 GIDTQANYPYKAVQG---PCQAAS-KVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDAS 135
Query: 62 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIE 121
+ I L H V +VGY YW+VRNSWG ++G+ ++
Sbjct: 136 SAQFQQYSSGIFSG---PCGTKLNHGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRML 188
Query: 122 R--GNNACG 128
R G CG
Sbjct: 189 RVGGCGLCG 197
Score = 47.3 bits (111), Expect = 3e-07
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 6/107 (5%)
Query: 110 PIGPDEGFFKIERGNNACGKDFLHFNGSETMKKILYKYGPLSVGLNSHLIHFYNGTPIRK 169
P +G + + +E K P +V +++ F +
Sbjct: 88 PYKAVQGPCQAASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIF 147
Query: 170 NDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIE 216
+ L H V +VGY YW+VRNSWG ++G+ ++
Sbjct: 148 SG--PCGTKLNHGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRML 188
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 54.6 bits (130), Expect = 1e-09
Identities = 32/142 (22%), Positives = 51/142 (35%), Gaps = 21/142 (14%)
Query: 1 MGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 60
G+ + DYPY + K + +K+ L GP+S+ +
Sbjct: 96 GGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPD----NKLKEALRFLGPISISVA 151
Query: 61 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG----------KQDDIPYWLVRNSWGP 110
+ I L HAV+LVG+G K + Y++++NSWG
Sbjct: 152 VSDDFAFYKEGIFDG---ECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQ 208
Query: 111 IGPDEGFFKIERGNNA----CG 128
+ GF IE + CG
Sbjct: 209 QWGERGFINIETDESGLMRKCG 230
Score = 51.5 bits (122), Expect = 1e-08
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 13/134 (9%)
Query: 93 YGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGKDFLHFNGSETMKKILYKYGPLSV 152
+ ++ + + I+R G +K+ L GP+S+
Sbjct: 89 FEDMIELGGICPDGDYPYVSDAPNLCNIDRCTEKYGIKNYLSVPDNKLKEALRFLGPISI 148
Query: 153 GLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYG----------KQDDIPYWLVRNS 202
+ + I L HAV+LVG+G K + Y++++NS
Sbjct: 149 SVAVSDDFAFYKEGIFDG---ECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNS 205
Query: 203 WGPIGPDEGFFKIE 216
WG + GF IE
Sbjct: 206 WGQQWGERGFINIE 219
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 52.7 bits (125), Expect = 3e-09
Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 12/127 (9%)
Query: 6 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 65
YPY+ K + +N + P+SV+L +
Sbjct: 83 RNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLY--SIANQPVSVVLEAAGKD 140
Query: 66 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNN 125
+ D HAV VGYG Y L++NSWG + G+ +I+RG
Sbjct: 141 FQLYRGGIFVGPCGNKVD--HAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTG 194
Query: 126 A----CG 128
CG
Sbjct: 195 NSYGVCG 201
Score = 48.5 bits (114), Expect = 1e-07
Identities = 28/141 (19%), Positives = 43/141 (30%), Gaps = 9/141 (6%)
Query: 79 CSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFFKIERGNNACGKDFLHFNGSE 138
C G Q Y + + P + + + K
Sbjct: 56 CDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQP 115
Query: 139 TMKKILYK---YGPLSVGLNSHLIHFYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIP 195
+ L P+SV L + F + D HAV VGYG
Sbjct: 116 YNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVD--HAVAAVGYGP----N 169
Query: 196 YWLVRNSWGPIGPDEGFFKIE 216
Y L++NSWG + G+ +I+
Sbjct: 170 YILIKNSWGTGWGENGYIRIK 190
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 42.6 bits (100), Expect = 2e-05
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 86 HAVLLVGYGKQDD---IPYWLVRNSWGPIGPDEGFFKI 120
HA+L+ G + + V NSWG +G + +
Sbjct: 374 HAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM 411
Score = 42.6 bits (100), Expect = 2e-05
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 181 HAVLLVGYGKQDD---IPYWLVRNSWGPIGPDEGFFKI 215
HA+L+ G + + V NSWG +G + +
Sbjct: 374 HAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM 411
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 41.0 bits (96), Expect = 7e-05
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
Query: 41 GSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKND--ETCSPYDLGHAVLLVGYGKQD 97
G + K K G + L + +L+ + + K + + HA+ ++D
Sbjct: 324 GCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGE-SLMTHAMTFTAVSEKD 382
Query: 98 D----IPYWLVRNSWGPIGPDEGFF 118
D W V NSWG +G+
Sbjct: 383 DQDGAFTKWRVENSWGEDHGHKGYL 407
Score = 40.7 bits (95), Expect = 8e-05
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Query: 181 HAVLLVGYGKQDD----IPYWLVRNSWGPIGPDEGFF 213
HA+ ++DD W V NSWG +G+
Sbjct: 371 HAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYL 407
>d1k4ta2 d.163.1.2 (A:431-640,A:713-765) Eukaryotic DNA
topoisomerase I, catalytic core {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 27.5 bits (61), Expect = 1.3
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 21 CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGP 54
+ + ++ T K F +N S T+++ L +
Sbjct: 144 NKHLQDLMEGLTAKVFRTYNASITLQQQLKELTA 177
>d1amfa_ c.94.1.1 (A:) Molybdate-binding protein, ModA {Escherichia
coli [TaxId: 562]}
Length = 231
Score = 24.6 bits (52), Expect = 9.9
Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 10/97 (10%)
Query: 59 LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDDIPYWLVRNSWGPIGPDEGFF 118
L + P + + A L + Y P++
Sbjct: 134 LGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVY---GSDAVASKGVKVVATFPEDSHK 190
Query: 119 KIERG-------NNACGKDFLHFNGSETMKKILYKYG 148
K+E NNA K F + +I +YG
Sbjct: 191 KVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYG 227
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.142 0.459
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 957,203
Number of extensions: 46157
Number of successful extensions: 180
Number of sequences better than 10.0: 1
Number of HSP's gapped: 166
Number of HSP's successfully gapped: 47
Length of query: 233
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 151
Effective length of database: 1,281,736
Effective search space: 193542136
Effective search space used: 193542136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.1 bits)