BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy2822
         (78 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8K3M6|ERC2_RAT ERC protein 2 OS=Rattus norvegicus GN=Erc2 PE=1 SV=1
          Length = 957

 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 40/56 (71%)

Query: 1   VEELRSRLEEKNRHIEKKTQTALTATQEKNKMQAELQEMKDHMDIKDRKINVLQRK 56
           V+ LR RLEEK   + KKT+     T+EK  +  E+++MKD +++K+RKINVLQ+K
Sbjct: 492 VDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKK 547


>sp|Q6PH08|ERC2_MOUSE ERC protein 2 OS=Mus musculus GN=Erc2 PE=1 SV=2
          Length = 957

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 40/56 (71%)

Query: 1   VEELRSRLEEKNRHIEKKTQTALTATQEKNKMQAELQEMKDHMDIKDRKINVLQRK 56
           V+ LR RLEEK   + KKT+     T+EK  +  E+++MKD +++K+RKINVLQ+K
Sbjct: 492 VDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKK 547


>sp|O15083|ERC2_HUMAN ERC protein 2 OS=Homo sapiens GN=ERC2 PE=1 SV=3
          Length = 957

 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 40/56 (71%)

Query: 1   VEELRSRLEEKNRHIEKKTQTALTATQEKNKMQAELQEMKDHMDIKDRKINVLQRK 56
           V+ LR RLEEK   + KKT+     T+EK  +  E+++MKD +++K+RKINVLQ+K
Sbjct: 492 VDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKK 547


>sp|Q811U3|RB6I2_RAT ELKS/Rab6-interacting/CAST family member 1 OS=Rattus norvegicus
           GN=Erc1 PE=1 SV=1
          Length = 948

 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)

Query: 1   VEELRSRLEEKNRHIEKKTQTALTATQEKNKMQAELQEMKDHMDIKDRKINVLQRK 56
           V+ LR RLEEK   + KKT+      +EK     E+ ++KD +D+K+RK+NVLQ+K
Sbjct: 496 VDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKK 551


>sp|Q99MI1|RB6I2_MOUSE ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus GN=Erc1
           PE=1 SV=1
          Length = 1120

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)

Query: 1   VEELRSRLEEKNRHIEKKTQTALTATQEKNKMQAELQEMKDHMDIKDRKINVLQRK 56
           V+ LR RLEEK   + KKT+      +EK     E+ ++KD +D+K+RK+NVLQ+K
Sbjct: 524 VDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKK 579


>sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1
           PE=1 SV=1
          Length = 1116

 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)

Query: 1   VEELRSRLEEKNRHIEKKTQTALTATQEKNKMQAELQEMKDHMDIKDRKINVLQRK 56
           V+ LR RLEEK   + KKT+      +EK     E+ ++KD +D+K+RK+NVLQ+K
Sbjct: 524 VDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEIHDLKDMLDVKERKVNVLQKK 579


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.300    0.117    0.282 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,126,467
Number of Sequences: 539616
Number of extensions: 1173175
Number of successful extensions: 69705
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1736
Number of HSP's successfully gapped in prelim test: 1073
Number of HSP's that attempted gapping in prelim test: 31404
Number of HSP's gapped (non-prelim): 20965
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 55 (25.8 bits)