Query psy2823
Match_columns 122
No_of_seqs 41 out of 43
Neff 3.9
Searched_HMMs 29240
Date Fri Aug 16 17:50:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2823.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2823hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1c1g_A Tropomyosin; contractIl 97.3 0.022 7.6E-07 40.7 17.0 29 12-40 15-43 (284)
2 1x79_B RAB GTPase binding effe 95.7 0.26 8.7E-06 35.6 11.3 93 15-110 4-105 (112)
3 3na7_A HP0958; flagellar bioge 94.7 1.1 3.9E-05 34.6 15.9 27 12-38 20-46 (256)
4 3na7_A HP0958; flagellar bioge 94.7 1.1 3.9E-05 34.6 15.8 13 48-60 91-103 (256)
5 1ic2_A Tropomyosin alpha chain 94.4 0.67 2.3E-05 30.6 10.2 60 47-106 13-72 (81)
6 3oja_B Anopheles plasmodium-re 93.5 2.7 9.4E-05 34.8 14.4 107 13-119 452-581 (597)
7 3vkg_A Dynein heavy chain, cyt 93.4 1.6 5.3E-05 45.5 14.4 46 75-120 2056-2101(3245)
8 3oja_B Anopheles plasmodium-re 93.2 3.1 0.00011 34.4 16.4 42 79-120 527-568 (597)
9 2v4h_A NF-kappa-B essential mo 92.9 0.76 2.6E-05 33.1 8.5 15 78-92 86-100 (110)
10 1i84_S Smooth muscle myosin he 92.8 0.96 3.3E-05 42.0 11.1 17 21-37 861-877 (1184)
11 3hnw_A Uncharacterized protein 92.5 1.8 6.1E-05 31.5 10.2 99 8-106 26-134 (138)
12 3vkg_A Dynein heavy chain, cyt 92.4 1.6 5.4E-05 45.4 13.0 26 8-33 1932-1957(3245)
13 2dfs_A Myosin-5A; myosin-V, in 91.9 5.5 0.00019 37.2 15.1 35 47-81 984-1018(1080)
14 4dk0_A Putative MACA; alpha-ha 90.6 1.5 5.2E-05 34.1 8.7 7 22-28 75-81 (369)
15 2f1m_A Acriflavine resistance 90.4 1.5 5.3E-05 32.9 8.3 31 44-74 95-125 (277)
16 1ic2_A Tropomyosin alpha chain 89.6 3.1 0.0001 27.3 10.6 23 57-79 37-59 (81)
17 3fpp_A Macrolide-specific effl 89.5 1.3 4.4E-05 34.2 7.3 24 45-68 112-135 (341)
18 2v71_A Nuclear distribution pr 88.4 7.3 0.00025 30.0 11.5 36 5-40 5-40 (189)
19 2jee_A YIIU; FTSZ, septum, coi 87.8 4.9 0.00017 27.4 11.2 73 48-120 7-79 (81)
20 3i00_A HIP-I, huntingtin-inter 86.8 6.6 0.00023 28.1 9.2 29 12-40 17-45 (120)
21 2f1m_A Acriflavine resistance 85.9 9.1 0.00031 28.6 10.0 18 89-106 105-122 (277)
22 2i1j_A Moesin; FERM, coiled-co 84.1 1.5 5E-05 38.2 5.4 37 83-119 420-456 (575)
23 3jsv_C NF-kappa-B essential mo 83.7 4.7 0.00016 28.2 6.9 67 45-115 21-87 (94)
24 2no2_A HIP-I, huntingtin-inter 81.6 11 0.00038 26.3 14.9 31 83-113 69-99 (107)
25 3mq7_A Bone marrow stromal ant 81.6 13 0.00045 27.1 10.5 32 88-119 70-101 (121)
26 3hnw_A Uncharacterized protein 81.3 13 0.00044 26.9 13.6 40 80-119 94-133 (138)
27 3o0z_A RHO-associated protein 81.3 16 0.00054 27.8 15.8 32 87-118 95-126 (168)
28 3haj_A Human pacsin2 F-BAR; pa 80.6 17 0.00059 30.2 10.5 17 87-103 190-206 (486)
29 3lnn_A Membrane fusion protein 80.3 4.9 0.00017 31.2 6.7 65 12-76 93-158 (359)
30 3abh_A Pacsin2, protein kinase 80.3 7.5 0.00026 29.8 7.7 20 48-67 158-177 (312)
31 2i1j_A Moesin; FERM, coiled-co 79.1 2.8 9.5E-05 36.4 5.3 26 47-72 356-381 (575)
32 2fxo_A Myosin heavy chain, car 79.1 14 0.00048 25.9 17.1 110 11-120 7-121 (129)
33 3iv1_A Tumor susceptibility ge 79.1 12 0.00042 25.2 9.0 42 28-69 15-57 (78)
34 3q8t_A Beclin-1; autophagy, AT 77.6 14 0.00048 25.1 14.5 25 92-116 70-94 (96)
35 3q8t_A Beclin-1; autophagy, AT 77.4 14 0.00049 25.1 13.4 21 83-103 75-95 (96)
36 1x79_B RAB GTPase binding effe 76.4 18 0.00062 25.8 10.0 90 26-118 8-99 (112)
37 3u59_A Tropomyosin beta chain; 76.0 15 0.00053 24.7 11.6 12 105-116 81-92 (101)
38 2efk_A CDC42-interacting prote 75.6 23 0.00079 26.6 13.7 23 47-69 116-138 (301)
39 4gkw_A Spindle assembly abnorm 75.2 24 0.00082 26.6 11.4 72 12-85 13-84 (167)
40 2x3v_A Syndapin I, protein kin 74.6 27 0.00094 27.0 12.2 17 87-103 188-204 (337)
41 1vf7_A Multidrug resistance pr 74.6 12 0.0004 29.6 7.5 54 15-68 79-133 (369)
42 3iox_A AGI/II, PA; alpha helix 73.6 47 0.0016 29.2 14.3 37 84-120 68-104 (497)
43 2x3v_A Syndapin I, protein kin 73.2 20 0.00067 27.8 8.3 22 98-119 185-206 (337)
44 3i00_A HIP-I, huntingtin-inter 72.4 23 0.0008 25.2 10.3 30 64-93 50-79 (120)
45 1wt6_A Myotonin-protein kinase 70.7 17 0.00059 24.8 6.5 38 70-107 33-70 (81)
46 4emc_A Monopolin complex subun 69.2 35 0.0012 26.5 8.8 52 53-104 12-63 (190)
47 2efl_A Formin-binding protein 67.8 36 0.0012 25.4 14.7 34 47-80 123-156 (305)
48 3jsv_C NF-kappa-B essential mo 67.2 29 0.00099 24.2 9.2 29 75-103 61-89 (94)
49 2efl_A Formin-binding protein 66.7 38 0.0013 25.3 13.7 24 47-70 137-160 (305)
50 3u1c_A Tropomyosin alpha-1 cha 66.0 28 0.00096 23.6 14.7 26 54-79 37-62 (101)
51 3aco_A Pacsin2, protein kinase 65.9 11 0.00037 29.6 5.5 20 48-67 193-212 (350)
52 3ol1_A Vimentin; structural ge 65.3 32 0.0011 24.0 11.8 30 9-38 19-48 (119)
53 2efk_A CDC42-interacting prote 64.9 41 0.0014 25.1 14.4 22 47-68 130-151 (301)
54 2yy0_A C-MYC-binding protein; 61.1 19 0.00067 22.2 4.9 31 76-106 20-50 (53)
55 3lnn_A Membrane fusion protein 60.2 56 0.0019 25.1 8.6 23 84-106 131-153 (359)
56 1go4_E MAD1 (mitotic arrest de 57.8 45 0.0015 23.2 8.4 33 10-42 12-44 (100)
57 3u1c_A Tropomyosin alpha-1 cha 55.4 45 0.0015 22.5 14.5 20 48-67 17-36 (101)
58 3o0z_A RHO-associated protein 55.1 66 0.0023 24.3 16.9 37 73-109 95-131 (168)
59 4gkw_A Spindle assembly abnorm 54.5 66 0.0023 24.2 11.6 41 61-101 46-86 (167)
60 3a7p_A Autophagy protein 16; c 53.7 67 0.0023 24.0 10.7 58 48-112 69-126 (152)
61 2pms_C Pneumococcal surface pr 52.6 64 0.0022 23.4 9.6 18 103-120 103-120 (125)
62 3tnu_A Keratin, type I cytoske 50.9 60 0.002 22.6 9.9 22 48-69 78-99 (131)
63 3tnu_B Keratin, type II cytosk 50.9 59 0.002 22.5 10.6 20 48-67 76-95 (129)
64 1go4_E MAD1 (mitotic arrest de 50.7 60 0.0021 22.6 8.9 20 87-106 73-92 (100)
65 3s4r_A Vimentin; alpha-helix, 47.0 51 0.0017 22.1 5.6 35 83-117 57-91 (93)
66 3sjb_C Golgi to ER traffic pro 46.3 70 0.0024 22.1 6.6 55 26-80 25-82 (93)
67 4ani_A Protein GRPE; chaperone 46.0 49 0.0017 25.7 6.0 33 47-79 59-91 (213)
68 1a93_A Coiled coil, LZ, MYC pr 45.8 27 0.00091 20.2 3.4 32 5-36 2-33 (34)
69 3i2w_A Syndapin, LD46328P; EFC 45.1 19 0.00064 27.3 3.5 19 49-67 123-141 (290)
70 2akf_A Coronin-1A; coiled coil 44.2 33 0.0011 19.5 3.6 28 12-39 1-28 (32)
71 3nmd_A CGMP dependent protein 44.0 68 0.0023 21.2 6.9 48 49-110 21-68 (72)
72 2e7s_A RAB guanine nucleotide 42.6 90 0.0031 22.8 6.7 31 86-116 100-130 (135)
73 3oja_A Leucine-rich immune mol 42.5 1.3E+02 0.0045 24.2 13.7 114 4-119 347-472 (487)
74 2v4h_A NF-kappa-B essential mo 40.3 98 0.0034 22.0 12.7 35 78-112 72-106 (110)
75 3aco_A Pacsin2, protein kinase 40.1 1.3E+02 0.0044 23.4 7.8 11 101-111 197-207 (350)
76 3fx0_A NF-kappa-B essential mo 39.9 50 0.0017 23.1 4.7 16 45-60 36-51 (96)
77 3sjb_C Golgi to ER traffic pro 39.3 47 0.0016 23.0 4.5 32 11-42 50-81 (93)
78 3s4r_A Vimentin; alpha-helix, 38.9 86 0.0029 21.0 5.8 34 72-105 60-93 (93)
79 3mq7_A Bone marrow stromal ant 38.8 1.1E+02 0.0038 22.2 9.9 37 74-110 70-106 (121)
80 3q0x_A Centriole protein; cent 38.6 1.2E+02 0.0042 23.7 7.4 51 47-97 171-221 (228)
81 2wvr_A Geminin; DNA replicatio 38.0 1.5E+02 0.005 23.3 8.3 47 70-116 103-149 (209)
82 2yy0_A C-MYC-binding protein; 36.2 74 0.0025 19.4 5.0 34 7-40 16-49 (53)
83 2wt7_B Transcription factor MA 36.1 1E+02 0.0035 21.0 9.4 57 65-121 31-87 (90)
84 1uii_A Geminin; human, DNA rep 35.7 1E+02 0.0035 20.9 8.3 47 70-116 34-80 (83)
85 2pms_C Pneumococcal surface pr 35.6 1.2E+02 0.0043 21.9 8.3 22 85-106 99-120 (125)
86 3tnu_A Keratin, type I cytoske 34.9 1.1E+02 0.0039 21.2 8.3 23 93-115 81-103 (131)
87 4h22_A Leucine-rich repeat fli 33.2 1.3E+02 0.0043 21.2 7.7 45 72-116 18-64 (103)
88 3tnu_B Keratin, type II cytosk 33.0 1.2E+02 0.0041 20.9 9.5 22 94-115 80-101 (129)
89 3i2w_A Syndapin, LD46328P; EFC 32.8 31 0.0011 26.1 3.0 18 101-118 175-192 (290)
90 3ni0_A Bone marrow stromal ant 32.3 1.3E+02 0.0044 21.1 9.3 22 88-109 66-87 (99)
91 4emc_A Monopolin complex subun 31.2 1.5E+02 0.0052 22.9 6.6 24 47-70 27-50 (190)
92 3m91_A Proteasome-associated A 31.1 94 0.0032 19.1 6.1 6 87-92 28-33 (51)
93 3w03_C DNA repair protein XRCC 30.9 1.5E+02 0.0051 22.6 6.5 21 100-120 163-183 (184)
94 3swk_A Vimentin; cytoskeleton, 30.1 1.2E+02 0.0041 20.0 10.9 26 12-37 2-27 (86)
95 4dyl_A Tyrosine-protein kinase 29.8 2.1E+02 0.0072 23.1 7.7 20 99-118 167-186 (406)
96 2e7s_A RAB guanine nucleotide 29.3 1.6E+02 0.0054 21.5 6.2 10 26-35 27-36 (135)
97 2ocy_A RAB guanine nucleotide 29.1 1.8E+02 0.006 21.6 14.6 34 84-117 110-143 (154)
98 3iv1_A Tumor susceptibility ge 28.7 1.3E+02 0.0045 20.0 9.5 13 51-63 15-27 (78)
99 2b5u_A Colicin E3; high resolu 27.2 3.3E+02 0.011 24.2 11.9 59 48-106 295-359 (551)
100 2fic_A Bridging integrator 1; 25.8 2E+02 0.0068 21.1 8.4 48 68-115 151-198 (251)
101 3m3w_A Pacsin3, protein kinase 25.7 1.3E+02 0.0044 23.4 5.5 24 93-116 194-217 (320)
102 2lw1_A ABC transporter ATP-bin 25.7 1.4E+02 0.0048 19.3 7.7 52 13-64 18-73 (89)
103 4avm_A Bridging integrator 2; 24.5 1.8E+02 0.006 21.9 6.0 49 68-116 132-180 (237)
104 2dgc_A Protein (GCN4); basic d 24.2 1.4E+02 0.0046 18.6 4.9 33 87-119 28-60 (63)
105 1wlq_A Geminin; coiled-coil; 2 23.1 1.8E+02 0.0062 19.7 8.3 42 72-113 28-69 (83)
106 3haj_A Human pacsin2 F-BAR; pa 21.7 3.4E+02 0.012 22.3 15.3 25 96-120 185-209 (486)
No 1
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=97.32 E-value=0.022 Score=40.67 Aligned_cols=29 Identities=14% Similarity=0.201 Sum_probs=12.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q psy2823 12 LSRLLSERDKAVLEMDKSKEELERSQATL 40 (122)
Q Consensus 12 ~~rl~~E~eka~~e~ek~~eELErsQatl 40 (122)
|..+...++.+..++..+...+......+
T Consensus 15 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~~ 43 (284)
T 1c1g_A 15 KENALDRADEAEADKKAAEDRSKQLEDEL 43 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444443333
No 2
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=95.66 E-value=0.26 Score=35.55 Aligned_cols=93 Identities=18% Similarity=0.239 Sum_probs=49.0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHhh---------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q psy2823 15 LLSERDKAVLEMDKSKEELERSQATLATL---------STSAELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEK 85 (122)
Q Consensus 15 l~~E~eka~~e~ek~~eELErsQatl~~l---------~tq~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~ 85 (122)
.++.-++++.++.+++++|++..+....| .+..++..|++.+..+...|.-+|..-..++ ..++.++.
T Consensus 4 t~~~~~~lq~~~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q---~~vq~qL~ 80 (112)
T 1x79_B 4 TRDQVKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAK---RDVQEQMA 80 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Confidence 34555566666666666666665555332 3456788888888888777776663333222 33556666
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhHH
Q psy2823 86 TMQEKVEKSQGEVYRLKAKLENTQG 110 (122)
Q Consensus 86 ~lQ~elEksQ~e~~rlq~elE~aQ~ 110 (122)
.|....+....++-||+++.++..+
T Consensus 81 ~Lt~~Re~V~~eL~rLQ~eNd~L~G 105 (112)
T 1x79_B 81 VLMQSREQVSEELVRLQKDNDSLQG 105 (112)
T ss_dssp HHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHHHHHHHHHhhccchhh
Confidence 6777777666666777666665543
No 3
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=94.68 E-value=1.1 Score=34.58 Aligned_cols=27 Identities=15% Similarity=0.165 Sum_probs=11.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHH
Q psy2823 12 LSRLLSERDKAVLEMDKSKEELERSQA 38 (122)
Q Consensus 12 ~~rl~~E~eka~~e~ek~~eELErsQa 38 (122)
+.+|...+..+-.++..+..++....+
T Consensus 20 i~~l~~~~~~lp~el~~le~~~~~l~~ 46 (256)
T 3na7_A 20 IDSLEPLIREKRKDLDKALNDKEAKNK 46 (256)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 334444444444444444444443333
No 4
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=94.67 E-value=1.1 Score=34.56 Aligned_cols=13 Identities=31% Similarity=0.207 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHHH
Q psy2823 48 ELDRLQEKYDKTC 60 (122)
Q Consensus 48 EldrlQekldk~~ 60 (122)
|++-++..++.+.
T Consensus 91 E~~aL~kEie~~~ 103 (256)
T 3na7_A 91 ELRSLNIEEDIAK 103 (256)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 5
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=94.36 E-value=0.67 Score=30.57 Aligned_cols=60 Identities=13% Similarity=0.227 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHH
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLE 106 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE 106 (122)
.+.|.+.++++.+...+..+...+...-.++...+--+..+...+++++..+..+..+|+
T Consensus 13 ~e~d~a~~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLe 72 (81)
T 1ic2_A 13 LDKENALDRAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLE 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666666655444444444444333344444444444444444444443
No 6
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=93.54 E-value=2.7 Score=34.77 Aligned_cols=107 Identities=12% Similarity=0.210 Sum_probs=61.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHHHHhh-----------------------hhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 13 SRLLSERDKAVLEMDKSKEELERSQATLATL-----------------------STSAELDRLQEKYDKTCADLRRAQAE 69 (122)
Q Consensus 13 ~rl~~E~eka~~e~ek~~eELErsQatl~~l-----------------------~tq~EldrlQekldk~~~Elrr~Q~e 69 (122)
+.+..+......++.++.+++.+.+..+..+ ....++.++.++..+...++.+.+..
T Consensus 452 e~l~~e~~~~~~~i~~l~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 531 (597)
T 3oja_B 452 EQLEAEVNELRAEVQQLTNEQIQQEQLLQGLHAEIDTNLRRYRLPKDGLARSSDNLNKVFTHLKERQAFKLRETQARRTE 531 (597)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcCccccccCCHHHHHHHHHHHHHhhhhhhHHHHHHHHHh
Confidence 3444455555556666666666655555321 11234555555666666666666655
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy2823 70 LRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEY 119 (122)
Q Consensus 70 le~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~El 119 (122)
....+...++.+.+...+..+++..+..+.+++.+..+.-.++..+.+.+
T Consensus 532 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~ 581 (597)
T 3oja_B 532 ADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKK 581 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55555556666666666666666666666666666666666666555544
No 7
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=93.39 E-value=1.6 Score=45.47 Aligned_cols=46 Identities=15% Similarity=0.311 Sum_probs=27.3
Q ss_pred HHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy2823 75 ADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYE 120 (122)
Q Consensus 75 ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~ElE 120 (122)
.+-++...+++..+.+++.|..-+.-|-+|..++......+...+.
T Consensus 2056 ~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~~~~~~l~~~~~ 2101 (3245)
T 3vkg_A 2056 RETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMS 2101 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHH
Confidence 3334444455556666666666666666666666666666665543
No 8
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=93.19 E-value=3.1 Score=34.42 Aligned_cols=42 Identities=21% Similarity=0.344 Sum_probs=25.9
Q ss_pred HhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy2823 79 RVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYE 120 (122)
Q Consensus 79 ~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~ElE 120 (122)
+.........+++++.+.++.++...+++.+..+..+++++.
T Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~ 568 (597)
T 3oja_B 527 ARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETS 568 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHH
Confidence 333444555566666666666777777777766666666654
No 9
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=92.89 E-value=0.76 Score=33.14 Aligned_cols=15 Identities=27% Similarity=0.534 Sum_probs=5.6
Q ss_pred HHhhhHHHHHHHHHH
Q psy2823 78 ERVRSEEKTMQEKVE 92 (122)
Q Consensus 78 e~~q~e~~~lQ~elE 92 (122)
+++.++.++|+.++.
T Consensus 86 Ekl~~eKe~L~~ql~ 100 (110)
T 2v4h_A 86 EKLVEKKEYLQEQLE 100 (110)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHH
Confidence 333333333333333
No 10
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=92.79 E-value=0.96 Score=42.02 Aligned_cols=17 Identities=18% Similarity=0.350 Sum_probs=7.1
Q ss_pred HhHHHHHHHHHHHHHhH
Q psy2823 21 KAVLEMDKSKEELERSQ 37 (122)
Q Consensus 21 ka~~e~ek~~eELErsQ 37 (122)
.+..++..++..|.+..
T Consensus 861 ~L~~eL~el~~~L~~le 877 (1184)
T 1i84_S 861 AKDEELQRTKERQQKAE 877 (1184)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444444444443
No 11
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=92.46 E-value=1.8 Score=31.53 Aligned_cols=99 Identities=18% Similarity=0.260 Sum_probs=49.1
Q ss_pred CchHHHHHHHHHHHhHHHHHHH--HHHHHHhHH-HHHhhhhhHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHH
Q psy2823 8 PPGTLSRLLSERDKAVLEMDKS--KEELERSQA-TLATLSTSAELDRLQEKYDKTCADLRRA-------QAELRVVQADN 77 (122)
Q Consensus 8 ~Q~~~~rl~~E~eka~~e~ek~--~eELErsQa-tl~~l~tq~EldrlQekldk~~~Elrr~-------Q~ele~tQ~~~ 77 (122)
+...+..+..-.|.-..++-.. -.-+..... -++.+..-.|+-+++.+.+....++... ..++-.++..+
T Consensus 26 ~ee~L~~vA~~vd~km~ei~~~~~~~~l~~~r~aVLaALNiadEl~k~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~ 105 (138)
T 3hnw_A 26 SEEYLQRVASYINNKITEFNKEESYRRMSAELRTDMMYLNIADDYFKAKKMADSLSLDIENKDKEIYDLKHELIAAQIKA 105 (138)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666666655555433 222322221 2233444455555555555555555544 44444444444
Q ss_pred HHhhhHHHHHHHHHHhhHHHHHHHHHHHH
Q psy2823 78 ERVRSEEKTMQEKVEKSQGEVYRLKAKLE 106 (122)
Q Consensus 78 e~~q~e~~~lQ~elEksQ~e~~rlq~elE 106 (122)
+.+..++..+++++...+..+.+|.++++
T Consensus 106 e~~~~e~~~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 106 ESSAKEIKELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455555555555555555544443
No 12
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=92.44 E-value=1.6 Score=45.42 Aligned_cols=26 Identities=15% Similarity=0.155 Sum_probs=12.6
Q ss_pred CchHHHHHHHHHHHhHHHHHHHHHHH
Q psy2823 8 PPGTLSRLLSERDKAVLEMDKSKEEL 33 (122)
Q Consensus 8 ~Q~~~~rl~~E~eka~~e~ek~~eEL 33 (122)
+...|..++.++...+-+++....+.
T Consensus 1932 t~~~V~~l~~~L~~~~~~L~~k~~ea 1957 (3245)
T 3vkg_A 1932 TEAQVKDLQVSLAQKNRELDVKNEQA 1957 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555554444444333
No 13
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=91.93 E-value=5.5 Score=37.19 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAELRVVQADNERVR 81 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q 81 (122)
..+..++++++....++.++..+....+...++.+
T Consensus 984 ~~v~~L~~e~~~l~~~~~~~~ke~~~lee~~~~~~ 1018 (1080)
T 2dfs_A 984 NRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYK 1018 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555555555555444444433
No 14
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=90.62 E-value=1.5 Score=34.11 Aligned_cols=7 Identities=0% Similarity=-0.040 Sum_probs=2.5
Q ss_pred hHHHHHH
Q psy2823 22 AVLEMDK 28 (122)
Q Consensus 22 a~~e~ek 28 (122)
+.+++..
T Consensus 75 ~~a~l~~ 81 (369)
T 4dk0_A 75 RKAALAS 81 (369)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 15
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=90.38 E-value=1.5 Score=32.85 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=17.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 44 STSAELDRLQEKYDKTCADLRRAQAELRVVQ 74 (122)
Q Consensus 44 ~tq~EldrlQekldk~~~Elrr~Q~ele~tQ 74 (122)
-++.++|..+..++.+.+.+..+++++...+
T Consensus 95 ~s~~~~~~a~~~~~~a~a~l~~a~a~l~~a~ 125 (277)
T 2f1m_A 95 ISKQEYDQALADAQQANAAVTAAKAAVETAR 125 (277)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556777666666666665555554444433
No 16
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=89.62 E-value=3.1 Score=27.31 Aligned_cols=23 Identities=13% Similarity=0.201 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 57 DKTCADLRRAQAELRVVQADNER 79 (122)
Q Consensus 57 dk~~~Elrr~Q~ele~tQ~~~e~ 79 (122)
.++..++.-++..+..+..++++
T Consensus 37 ~~~E~ev~~L~kKiq~lE~eld~ 59 (81)
T 1ic2_A 37 KQLEDELVALQKKLKGTEDELDK 59 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 17
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=89.53 E-value=1.3 Score=34.25 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=10.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 45 TSAELDRLQEKYDKTCADLRRAQA 68 (122)
Q Consensus 45 tq~EldrlQekldk~~~Elrr~Q~ 68 (122)
++.+++.++..+..+.+++..+++
T Consensus 112 s~~~~~~a~~~~~~~~a~l~~~~a 135 (341)
T 3fpp_A 112 SQQDLDNAATEMAVKQAQIGTIDA 135 (341)
T ss_dssp TTHHHHHHHHHHHHTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444443333
No 18
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=88.36 E-value=7.3 Score=30.02 Aligned_cols=36 Identities=11% Similarity=-0.017 Sum_probs=24.9
Q ss_pred CCCCchHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q psy2823 5 LVPPPGTLSRLLSERDKAVLEMDKSKEELERSQATL 40 (122)
Q Consensus 5 ~~~~Q~~~~rl~~E~eka~~e~ek~~eELErsQatl 40 (122)
+.++...|.=-.+...+....++.++.||.-=|...
T Consensus 5 f~s~~ee~~ywk~~~~~~~q~~~~le~El~EFqesS 40 (189)
T 2v71_A 5 FSSLKEETAYWKELSMKYKQSFQEARDELVEFQEGS 40 (189)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666666667777777777777777777766544
No 19
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=87.82 E-value=4.9 Score=27.38 Aligned_cols=73 Identities=18% Similarity=0.263 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy2823 48 ELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYE 120 (122)
Q Consensus 48 EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~ElE 120 (122)
=|++|-.|.+.+---+.-+|.+++.....+...-.+++.++...+....+..+|+.+...+++-+..|=+.++
T Consensus 7 lleqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk~e 79 (81)
T 2jee_A 7 VFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRME 79 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3677777888888778888888777777777766666667777777777888888888888888877766554
No 20
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=86.81 E-value=6.6 Score=28.08 Aligned_cols=29 Identities=24% Similarity=0.299 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q psy2823 12 LSRLLSERDKAVLEMDKSKEELERSQATL 40 (122)
Q Consensus 12 ~~rl~~E~eka~~e~ek~~eELErsQatl 40 (122)
|..|..+.+.+..+++++..|--+.-.+|
T Consensus 17 Ie~Lkreie~lk~ele~l~~E~q~~v~ql 45 (120)
T 3i00_A 17 IERLYREISGLKAQLENMKTESQRVVLQL 45 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555544444433333
No 21
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=85.86 E-value=9.1 Score=28.55 Aligned_cols=18 Identities=22% Similarity=0.305 Sum_probs=6.6
Q ss_pred HHHHhhHHHHHHHHHHHH
Q psy2823 89 EKVEKSQGEVYRLKAKLE 106 (122)
Q Consensus 89 ~elEksQ~e~~rlq~elE 106 (122)
..+..++..+..++..++
T Consensus 105 ~~~~~a~a~l~~a~a~l~ 122 (277)
T 2f1m_A 105 ADAQQANAAVTAAKAAVE 122 (277)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333333333333
No 22
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=84.06 E-value=1.5 Score=38.17 Aligned_cols=37 Identities=22% Similarity=0.361 Sum_probs=9.1
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy2823 83 EEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEY 119 (122)
Q Consensus 83 e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~El 119 (122)
...++.+..++--.+..+++.++..++...+..+.+|
T Consensus 420 ~~~~~~~~~~~~~~e~~~~~~~~~~a~~~~~~~~~~l 456 (575)
T 2i1j_A 420 EVSRIQQEVELKDSETRRLQEEVEDARRKQDEAAAAL 456 (575)
T ss_dssp ----------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555666666666666666555554
No 23
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=83.70 E-value=4.7 Score=28.24 Aligned_cols=67 Identities=18% Similarity=0.247 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHH
Q psy2823 45 TSAELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESM 115 (122)
Q Consensus 45 tq~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l 115 (122)
-+..+|.+.+...+....+.+.. +...+.+--.+|+..=+.-.|+++++..+|+..+...|.+..+|
T Consensus 21 kq~~id~lke~~~q~~~~~E~i~----vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~lq~q~~~L 87 (94)
T 3jsv_C 21 KQELIDKLKEEAEQHKIVMETVP----VLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKL 87 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTC--
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 44566666665555544443322 22222222223333333344444444444444444444443333
No 24
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=81.64 E-value=11 Score=26.27 Aligned_cols=31 Identities=19% Similarity=0.209 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhHHHHH
Q psy2823 83 EEKTMQEKVEKSQGEVYRLKAKLENTQGEME 113 (122)
Q Consensus 83 e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e 113 (122)
++..++..++.++..=..+-.++...+.+..
T Consensus 69 el~~lq~~l~~~~~~~~~l~~~~~~l~~Ek~ 99 (107)
T 2no2_A 69 ELQVLQGSLETSAQSEANWAAEFAELEKERD 99 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444443344444444444333
No 25
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=81.64 E-value=13 Score=27.09 Aligned_cols=32 Identities=38% Similarity=0.617 Sum_probs=21.1
Q ss_pred HHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy2823 88 QEKVEKSQGEVYRLKAKLENTQGEMESMKEEY 119 (122)
Q Consensus 88 Q~elEksQ~e~~rlq~elE~aQ~e~e~l~~El 119 (122)
+++++..++++..|.-+|.++-.+++++..+.
T Consensus 70 q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~ 101 (121)
T 3mq7_A 70 QKKVEELEGEITTLNHKLQDASAEVERLRREN 101 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 55566666777777777777777766666543
No 26
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=81.35 E-value=13 Score=26.88 Aligned_cols=40 Identities=25% Similarity=0.323 Sum_probs=16.8
Q ss_pred hhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy2823 80 VRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEY 119 (122)
Q Consensus 80 ~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~El 119 (122)
...++..++.+++.+.-++..++.++...+.+.-++..++
T Consensus 94 lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~ 133 (138)
T 3hnw_A 94 LKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETEL 133 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444444444444433
No 27
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=81.27 E-value=16 Score=27.80 Aligned_cols=32 Identities=31% Similarity=0.473 Sum_probs=16.8
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHH
Q psy2823 87 MQEKVEKSQGEVYRLKAKLENTQGEMESMKEE 118 (122)
Q Consensus 87 lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~E 118 (122)
|+.++...++++.++...+.++..+.-.+++.
T Consensus 95 lq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ek 126 (168)
T 3o0z_A 95 LQARITSLQEEVKHLKHNLEKVEGERKEAQDM 126 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555555554443
No 28
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=80.57 E-value=17 Score=30.19 Aligned_cols=17 Identities=35% Similarity=0.640 Sum_probs=6.4
Q ss_pred HHHHHHhhHHHHHHHHH
Q psy2823 87 MQEKVEKSQGEVYRLKA 103 (122)
Q Consensus 87 lQ~elEksQ~e~~rlq~ 103 (122)
++.+++++...+.....
T Consensus 190 ~~~k~~k~~~~~~~a~~ 206 (486)
T 3haj_A 190 LQDKIEKCKQDVLKTKE 206 (486)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 29
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=80.33 E-value=4.9 Score=31.15 Aligned_cols=65 Identities=23% Similarity=0.388 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHHHHh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 12 LSRLLSERDKAVLEMDKSKEELERSQATLAT-LSTSAELDRLQEKYDKTCADLRRAQAELRVVQAD 76 (122)
Q Consensus 12 ~~rl~~E~eka~~e~ek~~eELErsQatl~~-l~tq~EldrlQekldk~~~Elrr~Q~ele~tQ~~ 76 (122)
+....+.+..+...++..+.+++|.+.-+.. ..++.+++.++..++.+.+.+..++..+......
T Consensus 93 l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a~l~~a~~~l~~~~~~ 158 (359)
T 3lnn_A 93 LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAK 158 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4455566666666666666666665533321 2456777777777777777777777666554443
No 30
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=80.28 E-value=7.5 Score=29.85 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy2823 48 ELDRLQEKYDKTCADLRRAQ 67 (122)
Q Consensus 48 EldrlQekldk~~~Elrr~Q 67 (122)
.++++..+.++..-++.++.
T Consensus 158 ~l~KaK~~Y~~~c~e~e~a~ 177 (312)
T 3abh_A 158 EVEAAKKAHHAACKEEKLAI 177 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444443
No 31
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=79.12 E-value=2.8 Score=36.43 Aligned_cols=26 Identities=27% Similarity=0.151 Sum_probs=4.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAELRV 72 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~ele~ 72 (122)
.+|.+.++.++....++++++.+.+.
T Consensus 356 ~~l~~~~~~~~~l~e~~~~~~~e~~~ 381 (575)
T 2i1j_A 356 ANLLEAQDMILRLEEQLRQLQAAKEE 381 (575)
T ss_dssp HHHHHHHHC-----------------
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444333
No 32
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=79.06 E-value=14 Score=25.93 Aligned_cols=110 Identities=21% Similarity=0.221 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q psy2823 11 TLSRLLSERDKAVLEMDKSKEELERSQATLATL-----STSAELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEK 85 (122)
Q Consensus 11 ~~~rl~~E~eka~~e~ek~~eELErsQatl~~l-----~tq~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~ 85 (122)
.+.|--.+..+...++.++++.|+++.+....+ ..-.+...++..|.--..-+.-+..-..+..+.....-+.+.
T Consensus 7 ~~~~~e~E~~~~~eel~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~ 86 (129)
T 2fxo_A 7 KSAEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVK 86 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777777777777776555332 223344444444443333333333223333333333334444
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy2823 86 TMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYE 120 (122)
Q Consensus 86 ~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~ElE 120 (122)
-+...++.--.....|..+..+++.+...++..++
T Consensus 87 el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~le 121 (129)
T 2fxo_A 87 EMNKRLEDEEEMNAELTAKKRKLEDECSELKRDID 121 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555566666666666666666666554
No 33
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=79.05 E-value=12 Score=25.19 Aligned_cols=42 Identities=33% Similarity=0.506 Sum_probs=26.9
Q ss_pred HHHHHHHHhHHHHHhh-hhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 28 KSKEELERSQATLATL-STSAELDRLQEKYDKTCADLRRAQAE 69 (122)
Q Consensus 28 k~~eELErsQatl~~l-~tq~EldrlQekldk~~~Elrr~Q~e 69 (122)
++++.++..|+.+.+| .|+.||-.=+.+++..-..|.+=+++
T Consensus 15 rl~E~~~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~ 57 (78)
T 3iv1_A 15 RMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAE 57 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 5667777777777665 56666666666666666555554433
No 34
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=77.56 E-value=14 Score=25.11 Aligned_cols=25 Identities=12% Similarity=0.262 Sum_probs=11.8
Q ss_pred HhhHHHHHHHHHHHHhhHHHHHHHH
Q psy2823 92 EKSQGEVYRLKAKLENTQGEMESMK 116 (122)
Q Consensus 92 EksQ~e~~rlq~elE~aQ~e~e~l~ 116 (122)
-..+-++.-+...+..++..+++|+
T Consensus 70 ~e~~dE~~Sl~~q~~~~~~qLdkL~ 94 (96)
T 3q8t_A 70 LELDDELKSVENQMRYAQMQLDKLK 94 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334444444445555555555543
No 35
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=77.39 E-value=14 Score=25.08 Aligned_cols=21 Identities=24% Similarity=0.344 Sum_probs=11.7
Q ss_pred HHHHHHHHHHhhHHHHHHHHH
Q psy2823 83 EEKTMQEKVEKSQGEVYRLKA 103 (122)
Q Consensus 83 e~~~lQ~elEksQ~e~~rlq~ 103 (122)
+...+--++.-++.++.+|++
T Consensus 75 E~~Sl~~q~~~~~~qLdkL~K 95 (96)
T 3q8t_A 75 ELKSVENQMRYAQMQLDKLKK 95 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 444455555666666666553
No 36
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=76.44 E-value=18 Score=25.78 Aligned_cols=90 Identities=10% Similarity=0.106 Sum_probs=39.2
Q ss_pred HHHHHHHHHHhHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHH
Q psy2823 26 MDKSKEELERSQATLATLS--TSAELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKA 103 (122)
Q Consensus 26 ~ek~~eELErsQatl~~l~--tq~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~ 103 (122)
.++|+.++...+-+|..+. -..--+.++++-+.+..++..+..-...+...+...+.-+.+.+. ..+.++.+|..
T Consensus 8 ~~~lq~~~~ql~~qL~k~~~~r~~Le~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q~---~vq~qL~~Lt~ 84 (112)
T 1x79_B 8 VKKLQLMLRQANDQLEKTMKDKQELEDFIKQSSEDSSHQISALVLRAQASEILLEELQQGLSQAKR---DVQEQMAVLMQ 84 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 4455555554444443321 112233345555555555555554444444444443333333332 23455566666
Q ss_pred HHHhhHHHHHHHHHH
Q psy2823 104 KLENTQGEMESMKEE 118 (122)
Q Consensus 104 elE~aQ~e~e~l~~E 118 (122)
.++....++.+|+.+
T Consensus 85 ~Re~V~~eL~rLQ~e 99 (112)
T 1x79_B 85 SREQVSEELVRLQKD 99 (112)
T ss_dssp HHHHHHTC-------
T ss_pred HHHHHHHHHHHHHhh
Confidence 666666666655554
No 37
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=76.04 E-value=15 Score=24.74 Aligned_cols=12 Identities=17% Similarity=0.410 Sum_probs=4.7
Q ss_pred HHhhHHHHHHHH
Q psy2823 105 LENTQGEMESMK 116 (122)
Q Consensus 105 lE~aQ~e~e~l~ 116 (122)
+..+.+++..|.
T Consensus 81 ~~~AE~evasLn 92 (101)
T 3u59_A 81 ATDAEAEVASLN 92 (101)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333334444443
No 38
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=75.58 E-value=23 Score=26.56 Aligned_cols=23 Identities=17% Similarity=0.264 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAE 69 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~e 69 (122)
..+.+++..+.++..+|.++...
T Consensus 116 ~~~~k~~k~~~~~~~~l~KaKk~ 138 (301)
T 2efk_A 116 QEGRRAQQQLENGFKQLENSKRK 138 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444433
No 39
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=75.24 E-value=24 Score=26.60 Aligned_cols=72 Identities=21% Similarity=0.296 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q psy2823 12 LSRLLSERDKAVLEMDKSKEELERSQATLATLSTSAELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEK 85 (122)
Q Consensus 12 ~~rl~~E~eka~~e~ek~~eELErsQatl~~l~tq~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~ 85 (122)
|..|....+-...+++-.++||+-..--|. --+--+|++|.+----+-|+-++.+++.-.|--++++.+.+.
T Consensus 13 ia~L~~D~~s~~~eleEnqeEL~iVgkML~--EEqgKVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~Lk 84 (167)
T 4gkw_A 13 VADLKQDTESLQKQLEENQEELEIVGNMLR--EEQGKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLK 84 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 445555555566666666666655443331 234456666666665666666666666666666666555443
No 40
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=74.61 E-value=27 Score=26.95 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=6.2
Q ss_pred HHHHHHhhHHHHHHHHH
Q psy2823 87 MQEKVEKSQGEVYRLKA 103 (122)
Q Consensus 87 lQ~elEksQ~e~~rlq~ 103 (122)
++.+++++...+.....
T Consensus 188 ~~~k~~k~~~~~~~a~~ 204 (337)
T 2x3v_A 188 LVDKVDKCRQDVQKTQE 204 (337)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 41
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=74.61 E-value=12 Score=29.60 Aligned_cols=54 Identities=13% Similarity=0.190 Sum_probs=31.0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHh-hhhhHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 15 LLSERDKAVLEMDKSKEELERSQATLAT-LSTSAELDRLQEKYDKTCADLRRAQA 68 (122)
Q Consensus 15 l~~E~eka~~e~ek~~eELErsQatl~~-l~tq~EldrlQekldk~~~Elrr~Q~ 68 (122)
+..++..+.+++...+.+++|.+.-+.. .-++.+++.++..++.+.+.|..++.
T Consensus 79 ~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a~a~l~~a~~ 133 (369)
T 1vf7_A 79 YEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVEQARI 133 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666776666677776643322 24556666666655555554444443
No 42
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=73.65 E-value=47 Score=29.16 Aligned_cols=37 Identities=22% Similarity=0.223 Sum_probs=22.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy2823 84 EKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYE 120 (122)
Q Consensus 84 ~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~ElE 120 (122)
+++.+..|++-+.++-.-+.++...+.++..++.++.
T Consensus 68 l~kY~~dlakY~~~~AeY~~kl~aYe~~~~~~~k~la 104 (497)
T 3iox_A 68 LAKYQADLAKYQKDLADYPVKLKAYEDEQTSIKAALA 104 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666666666666666666666655555543
No 43
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=73.23 E-value=20 Score=27.78 Aligned_cols=22 Identities=18% Similarity=0.444 Sum_probs=9.9
Q ss_pred HHHHHHHHHhhHHHHHHHHHHH
Q psy2823 98 VYRLKAKLENTQGEMESMKEEY 119 (122)
Q Consensus 98 ~~rlq~elE~aQ~e~e~l~~El 119 (122)
+..++.+++++...+.....+|
T Consensus 185 ~eK~~~k~~k~~~~~~~a~~~Y 206 (337)
T 2x3v_A 185 QKKLVDKVDKCRQDVQKTQEKY 206 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444443
No 44
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=72.44 E-value=23 Score=25.18 Aligned_cols=30 Identities=10% Similarity=0.192 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHh
Q psy2823 64 RRAQAELRVVQADNERVRSEEKTMQEKVEK 93 (122)
Q Consensus 64 rr~Q~ele~tQ~~~e~~q~e~~~lQ~elEk 93 (122)
-.+.++|..+......+..+++.|..+++.
T Consensus 50 ~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~ 79 (120)
T 3i00_A 50 SELEADLAEQQHLRQQAADDCEFLRAELDE 79 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555555556666666666666653
No 45
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=70.73 E-value=17 Score=24.76 Aligned_cols=38 Identities=16% Similarity=0.351 Sum_probs=14.4
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHh
Q psy2823 70 LRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLEN 107 (122)
Q Consensus 70 le~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~ 107 (122)
|..+.+.+-...+.+.-...+......++.+++.+++.
T Consensus 33 Ls~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~ee 70 (81)
T 1wt6_A 33 MEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMEL 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333334444444444443
No 46
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=69.25 E-value=35 Score=26.50 Aligned_cols=52 Identities=17% Similarity=0.204 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHH
Q psy2823 53 QEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAK 104 (122)
Q Consensus 53 Qekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~e 104 (122)
+++++++---+.+++.|......+++....++..|++++......+...+..
T Consensus 12 q~ql~~ad~LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~ 63 (190)
T 4emc_A 12 KQQIDSADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQ 63 (190)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 3444444444444444444444444444444444444444444444443333
No 47
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=67.76 E-value=36 Score=25.42 Aligned_cols=34 Identities=9% Similarity=0.159 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAELRVVQADNERV 80 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~ 80 (122)
..+.+++..+.++..+|.++...-...-.+.+++
T Consensus 123 ~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a 156 (305)
T 2efl_A 123 HDGRKAQQHIETCWKQLESSKRRFERDCKEADRA 156 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555555554444433333333
No 48
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=67.21 E-value=29 Score=24.18 Aligned_cols=29 Identities=28% Similarity=0.422 Sum_probs=19.0
Q ss_pred HHHHHhhhHHHHHHHHHHhhHHHHHHHHH
Q psy2823 75 ADNERVRSEEKTMQEKVEKSQGEVYRLKA 103 (122)
Q Consensus 75 ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~ 103 (122)
++++++.++-+.|+..+..+|.++.+|..
T Consensus 61 adREkl~~eKe~L~~ql~~lq~q~~~L~~ 89 (94)
T 3jsv_C 61 HAREKLVEKKEYLQEQLEQLQREFNKLKV 89 (94)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHTTC----
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777777777777777777666654
No 49
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=66.67 E-value=38 Score=25.29 Aligned_cols=24 Identities=21% Similarity=0.584 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAEL 70 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~el 70 (122)
.+++++..+.++..-++.+++...
T Consensus 137 ~~l~KaK~~Y~~~~~e~e~a~~~~ 160 (305)
T 2efl_A 137 KQLESSKRRFERDCKEADRAQQYF 160 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444433
No 50
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=65.97 E-value=28 Score=23.60 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 54 EKYDKTCADLRRAQAELRVVQADNER 79 (122)
Q Consensus 54 ekldk~~~Elrr~Q~ele~tQ~~~e~ 79 (122)
.++.+.-.++.-++..+..+..++|+
T Consensus 37 ~~~~~~E~Ei~sL~kk~~~lE~eld~ 62 (101)
T 3u1c_A 37 ERSKQLEDDIVQLEKQLRVTEDSRDQ 62 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444
No 51
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=65.85 E-value=11 Score=29.62 Aligned_cols=20 Identities=30% Similarity=0.539 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy2823 48 ELDRLQEKYDKTCADLRRAQ 67 (122)
Q Consensus 48 EldrlQekldk~~~Elrr~Q 67 (122)
++++++.+++++..++..+.
T Consensus 193 ~~eK~~~k~~k~~~~~~~a~ 212 (350)
T 3aco_A 193 QLKKLQDKIEKCKQDVLKTK 212 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444433333
No 52
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=65.35 E-value=32 Score=23.96 Aligned_cols=30 Identities=10% Similarity=0.102 Sum_probs=21.2
Q ss_pred chHHHHHHHHHHHhHHHHHHHHHHHHHhHH
Q psy2823 9 PGTLSRLLSERDKAVLEMDKSKEELERSQA 38 (122)
Q Consensus 9 Q~~~~rl~~E~eka~~e~ek~~eELErsQa 38 (122)
.+.|..|+...+.+..++.++.-++.+.+.
T Consensus 19 e~~I~~LR~qid~~~~e~a~l~leldn~~~ 48 (119)
T 3ol1_A 19 EEEMRELRRQVDQLTNDKARVEVERDNLAE 48 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667777777777777777777777663
No 53
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=64.88 E-value=41 Score=25.14 Aligned_cols=22 Identities=18% Similarity=0.596 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2823 47 AELDRLQEKYDKTCADLRRAQA 68 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~ 68 (122)
.+++++..+.++..-++.+++.
T Consensus 130 ~~l~KaKk~Y~~~~~e~e~a~~ 151 (301)
T 2efk_A 130 KQLENSKRKFERDCREAEKAAQ 151 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444443
No 54
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=61.09 E-value=19 Score=22.16 Aligned_cols=31 Identities=42% Similarity=0.382 Sum_probs=15.3
Q ss_pred HHHHhhhHHHHHHHHHHhhHHHHHHHHHHHH
Q psy2823 76 DNERVRSEEKTMQEKVEKSQGEVYRLKAKLE 106 (122)
Q Consensus 76 ~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE 106 (122)
+.|..+.++..|+.+++....++.-|+.+++
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444455555555555555555544
No 55
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=60.23 E-value=56 Score=25.08 Aligned_cols=23 Identities=22% Similarity=0.268 Sum_probs=8.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Q psy2823 84 EKTMQEKVEKSQGEVYRLKAKLE 106 (122)
Q Consensus 84 ~~~lQ~elEksQ~e~~rlq~elE 106 (122)
++..+..+..++..+..++..+.
T Consensus 131 ~~~a~~~~~~a~a~l~~a~~~l~ 153 (359)
T 3lnn_A 131 FEQAQSDYDQAASESQRADARLA 153 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 56
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=57.75 E-value=45 Score=23.25 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHh
Q psy2823 10 GTLSRLLSERDKAVLEMDKSKEELERSQATLAT 42 (122)
Q Consensus 10 ~~~~rl~~E~eka~~e~ek~~eELErsQatl~~ 42 (122)
.++..|..+.+.+..|+++|+.+.+..-..+..
T Consensus 12 e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 12 EEADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777777777776666665644
No 57
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=55.43 E-value=45 Score=22.54 Aligned_cols=20 Identities=15% Similarity=0.285 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy2823 48 ELDRLQEKYDKTCADLRRAQ 67 (122)
Q Consensus 48 EldrlQekldk~~~Elrr~Q 67 (122)
+.|.+.++++.+...+..+.
T Consensus 17 e~e~a~drae~~e~~~k~~e 36 (101)
T 3u1c_A 17 DKENALDRAEQAEADKKAAE 36 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444433
No 58
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=55.11 E-value=66 Score=24.33 Aligned_cols=37 Identities=24% Similarity=0.369 Sum_probs=24.6
Q ss_pred HHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhH
Q psy2823 73 VQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQ 109 (122)
Q Consensus 73 tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ 109 (122)
.+.-+...+.++.++...+.++..+...|+.++-...
T Consensus 95 lq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lE 131 (168)
T 3o0z_A 95 LQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSE 131 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334455666777788888888877777777654433
No 59
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=54.50 E-value=66 Score=24.18 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHH
Q psy2823 61 ADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRL 101 (122)
Q Consensus 61 ~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rl 101 (122)
+-+-.+|.---.-|.++.+.+.++..+|-.++|+++.+.|.
T Consensus 46 gKVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~Lkrn 86 (167)
T 4gkw_A 46 GKVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLKRN 86 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Confidence 33344444334445666666667777777777777766553
No 60
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=53.68 E-value=67 Score=24.01 Aligned_cols=58 Identities=21% Similarity=0.273 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHH
Q psy2823 48 ELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEM 112 (122)
Q Consensus 48 EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~ 112 (122)
.+..++..+......+.....++..-...++. +++++..++.++--+..++.+.+.|-
T Consensus 69 ~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~-------l~DEl~aLqlq~n~lE~kl~kLq~EN 126 (152)
T 3a7p_A 69 TLAILQKELKSKEQEIRRLKEVIALKNKNTER-------LNAALISGTIENNVLQQKLSDLKKEH 126 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555555555555555555554455555 55555555555555555555555443
No 61
>2pms_C Pneumococcal surface protein A (PSPA); lactoferrin, protein-protein metal transport, hydrolase; HET: NAG; 2.91A {Streptococcus pneumoniae} SCOP: h.4.19.1
Probab=52.63 E-value=64 Score=23.42 Aligned_cols=18 Identities=11% Similarity=0.351 Sum_probs=7.1
Q ss_pred HHHHhhHHHHHHHHHHHh
Q psy2823 103 AKLENTQGEMESMKEEYE 120 (122)
Q Consensus 103 ~elE~aQ~e~e~l~~ElE 120 (122)
..+..-+.++++.+.+|+
T Consensus 103 ~~la~KkAEleKtqa~Ld 120 (125)
T 2pms_C 103 KTIAAKKAELEKTEADLK 120 (125)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333334444444433
No 62
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=50.94 E-value=60 Score=22.62 Aligned_cols=22 Identities=23% Similarity=0.324 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy2823 48 ELDRLQEKYDKTCADLRRAQAE 69 (122)
Q Consensus 48 EldrlQekldk~~~Elrr~Q~e 69 (122)
++..+|..+.....+|.++..+
T Consensus 78 ~l~~~q~~i~~lE~eL~~~r~e 99 (131)
T 3tnu_A 78 QLAQIQEMIGSVEEQLAQLRCE 99 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444433
No 63
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=50.87 E-value=59 Score=22.54 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy2823 48 ELDRLQEKYDKTCADLRRAQ 67 (122)
Q Consensus 48 EldrlQekldk~~~Elrr~Q 67 (122)
++..+|..+.....+|.++.
T Consensus 76 ~l~~~q~~i~~lE~eL~~~r 95 (129)
T 3tnu_B 76 ALKDARNKLAELEEALQKAK 95 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHH
Confidence 33344444444444444444
No 64
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=50.70 E-value=60 Score=22.59 Aligned_cols=20 Identities=30% Similarity=0.406 Sum_probs=9.5
Q ss_pred HHHHHHhhHHHHHHHHHHHH
Q psy2823 87 MQEKVEKSQGEVYRLKAKLE 106 (122)
Q Consensus 87 lQ~elEksQ~e~~rlq~elE 106 (122)
....+++.|.++++|+..+-
T Consensus 73 ~~~~~e~Lq~E~erLr~~v~ 92 (100)
T 1go4_E 73 LREDHSQLQAECERLRGLLR 92 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555544443
No 65
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=46.99 E-value=51 Score=22.15 Aligned_cols=35 Identities=14% Similarity=0.365 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHH
Q psy2823 83 EEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKE 117 (122)
Q Consensus 83 e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~ 117 (122)
.+..|+..++.+..+-.++.-++++.+.+.+.++.
T Consensus 57 ~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~~k~ 91 (93)
T 3s4r_A 57 EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLRE 91 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444444444545555555555555555444
No 66
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=46.33 E-value=70 Score=22.11 Aligned_cols=55 Identities=9% Similarity=0.063 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhHHHHHhhhhhHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy2823 26 MDKSKEELERSQATLATLSTSAEL---DRLQEKYDKTCADLRRAQAELRVVQADNERV 80 (122)
Q Consensus 26 ~ek~~eELErsQatl~~l~tq~El---drlQekldk~~~Elrr~Q~ele~tQ~~~e~~ 80 (122)
..+++.|+-.....++..++|.|+ -++.-++||.-.||.+....+...++-|+..
T Consensus 25 ~~~lk~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~F~~~ 82 (93)
T 3sjb_C 25 YLAKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAH 82 (93)
T ss_dssp HHHHHHHHHHHHHHHTTSCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344443333334444566554 4677788888888888887777777777664
No 67
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=45.97 E-value=49 Score=25.65 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAELRVVQADNER 79 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~ 79 (122)
.+++.+..++..+..++..+...+-+.++++++
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN 91 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFEN 91 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666666666666666666665
No 68
>1a93_A Coiled coil, LZ, MYC proto-oncogene protein; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Homo sapiens} SCOP: h.1.3.1 PDB: 2a93_A
Probab=45.82 E-value=27 Score=20.22 Aligned_cols=32 Identities=22% Similarity=0.158 Sum_probs=28.2
Q ss_pred CCCCchHHHHHHHHHHHhHHHHHHHHHHHHHh
Q psy2823 5 LVPPPGTLSRLLSERDKAVLEMDKSKEELERS 36 (122)
Q Consensus 5 ~~~~Q~~~~rl~~E~eka~~e~ek~~eELErs 36 (122)
.++.|+.=.+|..+.+++....+.+..-|++.
T Consensus 2 ~~slq~dE~kLl~ekE~l~~r~eqL~~kLe~L 33 (34)
T 1a93_A 2 CGGVQAEEQKLISEEDLLRKRREQLKHKLEQL 33 (34)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46789999999999999999999999888764
No 69
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=45.11 E-value=19 Score=27.28 Aligned_cols=19 Identities=21% Similarity=0.408 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy2823 49 LDRLQEKYDKTCADLRRAQ 67 (122)
Q Consensus 49 ldrlQekldk~~~Elrr~Q 67 (122)
+.+++..+.++..+|.++.
T Consensus 123 ~~k~~k~~~~~~~~l~kaK 141 (290)
T 3i2w_A 123 FKKAQKPWAKLLAKVEKAK 141 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444443
No 70
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=44.16 E-value=33 Score=19.53 Aligned_cols=28 Identities=29% Similarity=0.318 Sum_probs=17.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHH
Q psy2823 12 LSRLLSERDKAVLEMDKSKEELERSQAT 39 (122)
Q Consensus 12 ~~rl~~E~eka~~e~ek~~eELErsQat 39 (122)
|+||..+..|+..=.+++++-+.|..-|
T Consensus 1 isrlee~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 1 VSRLEEDVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777777667666666665543
No 71
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=43.99 E-value=68 Score=21.23 Aligned_cols=48 Identities=17% Similarity=0.289 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHH
Q psy2823 49 LDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQG 110 (122)
Q Consensus 49 ldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~ 110 (122)
+..+|.-+.+.-.+|+.-..-.+. +..++..--.++..|+.+++++++
T Consensus 21 i~eLq~~L~~K~eELr~kd~~I~e--------------LEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 21 LRDLQYALQEKIEELRQRDALIDE--------------LELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhhc
Confidence 555666666666666555533333 444444444555566666666554
No 72
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=42.56 E-value=90 Score=22.83 Aligned_cols=31 Identities=6% Similarity=0.116 Sum_probs=8.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHhhHHHHHHHH
Q psy2823 86 TMQEKVEKSQGEVYRLKAKLENTQGEMESMK 116 (122)
Q Consensus 86 ~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~ 116 (122)
.+..+.+.....+.-...-++..|.++..|+
T Consensus 100 ~~e~r~~~L~~ql~e~e~ll~~lq~QL~~LK 130 (135)
T 2e7s_A 100 AIEILNKRLTEQLREKDMLLDTLTLQLKNLK 130 (135)
T ss_dssp HHHHHHHHHHHTTTHHHHCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444444444
No 73
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=42.50 E-value=1.3e+02 Score=24.18 Aligned_cols=114 Identities=12% Similarity=0.018 Sum_probs=0.0
Q ss_pred cCCCCchHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhhhhHHHHHHHHHHHH------------HHHHHHHHHHHHH
Q psy2823 4 CLVPPPGTLSRLLSERDKAVLEMDKSKEELERSQATLATLSTSAELDRLQEKYDK------------TCADLRRAQAELR 71 (122)
Q Consensus 4 ~~~~~Q~~~~rl~~E~eka~~e~ek~~eELErsQatl~~l~tq~EldrlQekldk------------~~~Elrr~Q~ele 71 (122)
++..+-..+.++..+......+...+...++.-+-...... .++.....+.+. ...-..+...-..
T Consensus 347 yC~s~~~~~~~~~~~~~~l~~~~~~le~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (487)
T 3oja_A 347 QYRTVIDQVTLRKQAKITLEQKKKALDEQVSNGRRAHAELD--GTLQQAVGQIELQHATEEQSPLQLLRAIVKRYEEMYV 424 (487)
T ss_dssp HTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHTTSSCCCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hhHHHhhchhhhcccccccCcHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy2823 72 VVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEY 119 (122)
Q Consensus 72 ~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~El 119 (122)
..+.++++...+...++++.++.-.+-.|++..++............|
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (487)
T 3oja_A 425 EQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATL 472 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHH
No 74
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=40.27 E-value=98 Score=22.03 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=18.9
Q ss_pred HHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHH
Q psy2823 78 ERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEM 112 (122)
Q Consensus 78 e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~ 112 (122)
+--++++..=..-.|+++++..+|+..+...|.+.
T Consensus 72 ~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~q~ 106 (110)
T 2v4h_A 72 DIYKADFQAERHAREKLVEKKEYLQEQLEQLQREF 106 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccchhhHHHHHhHHHHHHHHHHHHHHHH
Confidence 33334444455555666666666666555555444
No 75
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=40.06 E-value=1.3e+02 Score=23.39 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=4.0
Q ss_pred HHHHHHhhHHH
Q psy2823 101 LKAKLENTQGE 111 (122)
Q Consensus 101 lq~elE~aQ~e 111 (122)
++.+++++..+
T Consensus 197 ~~~k~~k~~~~ 207 (350)
T 3aco_A 197 LQDKIEKCKQD 207 (350)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 76
>3fx0_A NF-kappa-B essential modulator; coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia, HOST-virus interaction; 3.20A {Homo sapiens}
Probab=39.87 E-value=50 Score=23.09 Aligned_cols=16 Identities=19% Similarity=0.372 Sum_probs=7.4
Q ss_pred hhHHHHHHHHHHHHHH
Q psy2823 45 TSAELDRLQEKYDKTC 60 (122)
Q Consensus 45 tq~EldrlQekldk~~ 60 (122)
-+..+|.+.+...+..
T Consensus 36 KQ~~ideLKe~i~q~~ 51 (96)
T 3fx0_A 36 KQEVIDKLKEEAEQHK 51 (96)
T ss_dssp TTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445555555444433
No 77
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=39.31 E-value=47 Score=23.00 Aligned_cols=32 Identities=13% Similarity=0.203 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHh
Q psy2823 11 TLSRLLSERDKAVLEMDKSKEELERSQATLAT 42 (122)
Q Consensus 11 ~~~rl~~E~eka~~e~ek~~eELErsQatl~~ 42 (122)
-|.+|+-.+||+-.+++++...|.-+.+.|..
T Consensus 50 KWaKL~Rk~DKl~~ele~l~~~l~~~k~~F~~ 81 (93)
T 3sjb_C 50 KWTKNNRKLDSLDKEINNLKDEIQSENKAFQA 81 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677778888888888888888877777743
No 78
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=38.93 E-value=86 Score=20.98 Aligned_cols=34 Identities=12% Similarity=0.342 Sum_probs=17.2
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHH
Q psy2823 72 VVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKL 105 (122)
Q Consensus 72 ~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~el 105 (122)
..+..++.+..+..++.-++++.+.++.+++.+|
T Consensus 60 ~Lr~~i~~~~~ek~~l~~e~dnl~~~~~~~k~KL 93 (93)
T 3s4r_A 60 ELRRQVDQLTNDKARVEVERDNLAEDIMRLREKL 93 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3334444444444445555555555665655543
No 79
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=38.76 E-value=1.1e+02 Score=22.17 Aligned_cols=37 Identities=24% Similarity=0.290 Sum_probs=28.5
Q ss_pred HHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHH
Q psy2823 74 QADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQG 110 (122)
Q Consensus 74 Q~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~ 110 (122)
|......++++..|-.+|.++-.++.||..+.+-.+.
T Consensus 70 q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~ 106 (121)
T 3mq7_A 70 QKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSV 106 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhh
Confidence 3446777888888999999999999999887764443
No 80
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=38.59 E-value=1.2e+02 Score=23.68 Aligned_cols=51 Identities=18% Similarity=0.234 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHH
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAELRVVQADNERVRSEEKTMQEKVEKSQGE 97 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e 97 (122)
.-+..+.+++.-....|+++++|.--.+++++..+-.++.+.+.+++.-.+
T Consensus 171 ~R~~~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (228)
T 3q0x_A 171 FRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKHLLE 221 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhee
Confidence 455666667777777777777777777777777777777787777765433
No 81
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=38.00 E-value=1.5e+02 Score=23.34 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHH
Q psy2823 70 LRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMK 116 (122)
Q Consensus 70 le~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~ 116 (122)
++.-+.-++.+..++..|.+.++..+.++..|+.+++....-++.++
T Consensus 103 AE~RR~AL~eaLeEN~~Lh~~ie~l~eEi~~LkeEn~eLkeLae~~q 149 (209)
T 2wvr_A 103 AEKRRKALYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQ 149 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445666777788888888888888888888888877776665554
No 82
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=36.17 E-value=74 Score=19.44 Aligned_cols=34 Identities=21% Similarity=0.158 Sum_probs=20.6
Q ss_pred CCchHHHHHHHHHHHhHHHHHHHHHHHHHhHHHH
Q psy2823 7 PPPGTLSRLLSERDKAVLEMDKSKEELERSQATL 40 (122)
Q Consensus 7 ~~Q~~~~rl~~E~eka~~e~ek~~eELErsQatl 40 (122)
|+-+.+..|+.|.+.+...++.+..+++-..+.|
T Consensus 16 p~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 16 PENPEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666666555554433
No 83
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=36.11 E-value=1e+02 Score=21.01 Aligned_cols=57 Identities=14% Similarity=0.154 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Q psy2823 65 RAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKEEYER 121 (122)
Q Consensus 65 r~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~ElE~ 121 (122)
|+=.-.--.|.++-+-..+...|..+....+.++..|..++..+..++..++..|+.
T Consensus 31 RtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 31 RTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334445566665556666677777777778888888888888888888777764
No 84
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=35.75 E-value=1e+02 Score=20.92 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHH
Q psy2823 70 LRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMK 116 (122)
Q Consensus 70 le~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~ 116 (122)
.+.-+.-++.+-.++..|.+.++..+.++..++.+++.+..-.+.++
T Consensus 34 AE~RR~AL~eaL~EN~~Lh~~ie~l~eEi~~lk~en~eL~elae~~q 80 (83)
T 1uii_A 34 AEKRRKALYEALKENEKLHKEIEQKDNEIARLKKENKELAEVAEHVQ 80 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556677778888888888888888888888887776666554
No 85
>2pms_C Pneumococcal surface protein A (PSPA); lactoferrin, protein-protein metal transport, hydrolase; HET: NAG; 2.91A {Streptococcus pneumoniae} SCOP: h.4.19.1
Probab=35.58 E-value=1.2e+02 Score=21.86 Aligned_cols=22 Identities=14% Similarity=0.367 Sum_probs=9.1
Q ss_pred HHHHHHHHhhHHHHHHHHHHHH
Q psy2823 85 KTMQEKVEKSQGEVYRLKAKLE 106 (122)
Q Consensus 85 ~~lQ~elEksQ~e~~rlq~elE 106 (122)
+-+++.+..-+-++..+++.|+
T Consensus 99 e~le~~la~KkAEleKtqa~Ld 120 (125)
T 2pms_C 99 EGLEKTIAAKKAELEKTEADLK 120 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444443
No 86
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=34.91 E-value=1.1e+02 Score=21.16 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=9.0
Q ss_pred hhHHHHHHHHHHHHhhHHHHHHH
Q psy2823 93 KSQGEVYRLKAKLENTQGEMESM 115 (122)
Q Consensus 93 ksQ~e~~rlq~elE~aQ~e~e~l 115 (122)
..|..+..+..++-.+..++.+.
T Consensus 81 ~~q~~i~~lE~eL~~~r~em~~q 103 (131)
T 3tnu_A 81 QIQEMIGSVEEQLAQLRCEMEQQ 103 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333444444444443333
No 87
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=33.16 E-value=1.3e+02 Score=21.20 Aligned_cols=45 Identities=20% Similarity=0.277 Sum_probs=25.3
Q ss_pred HHHHHHHHhh--hHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHH
Q psy2823 72 VVQADNERVR--SEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMK 116 (122)
Q Consensus 72 ~tQ~~~e~~q--~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~ 116 (122)
+.|-|+|++- .+.+.|.+++|-....+..++.++..--.+.+.++
T Consensus 18 nAQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~K 64 (103)
T 4h22_A 18 NAQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREK 64 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444432 46666666666666666666666655555555544
No 88
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=32.95 E-value=1.2e+02 Score=20.91 Aligned_cols=22 Identities=14% Similarity=0.398 Sum_probs=8.6
Q ss_pred hHHHHHHHHHHHHhhHHHHHHH
Q psy2823 94 SQGEVYRLKAKLENTQGEMESM 115 (122)
Q Consensus 94 sQ~e~~rlq~elE~aQ~e~e~l 115 (122)
.+..+..+...+-.+..++.+.
T Consensus 80 ~q~~i~~lE~eL~~~r~e~~~q 101 (129)
T 3tnu_B 80 ARNKLAELEEALQKAKQDMARL 101 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHH
Confidence 3333333333343343443333
No 89
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=32.84 E-value=31 Score=26.05 Aligned_cols=18 Identities=11% Similarity=0.481 Sum_probs=6.5
Q ss_pred HHHHHHhhHHHHHHHHHH
Q psy2823 101 LKAKLENTQGEMESMKEE 118 (122)
Q Consensus 101 lq~elE~aQ~e~e~l~~E 118 (122)
++.+++++...+.....+
T Consensus 175 ~~~k~~k~~~~~~~a~~~ 192 (290)
T 3i2w_A 175 MHDRVQKTKDQVQKCREK 192 (290)
T ss_dssp -CTTSSTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333334433333
No 90
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=32.30 E-value=1.3e+02 Score=21.09 Aligned_cols=22 Identities=32% Similarity=0.548 Sum_probs=12.8
Q ss_pred HHHHHhhHHHHHHHHHHHHhhH
Q psy2823 88 QEKVEKSQGEVYRLKAKLENTQ 109 (122)
Q Consensus 88 Q~elEksQ~e~~rlq~elE~aQ 109 (122)
+++.+..++++..|.-+|.++.
T Consensus 66 q~~v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 66 QARIKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666665554
No 91
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=31.17 E-value=1.5e+02 Score=22.86 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy2823 47 AELDRLQEKYDKTCADLRRAQAEL 70 (122)
Q Consensus 47 ~EldrlQekldk~~~Elrr~Q~el 70 (122)
.|...+-.+++....|+..++.++
T Consensus 27 ~En~~L~~ql~~k~~ei~~L~~ql 50 (190)
T 4emc_A 27 NENFVLSEKLDTKATEIKQLQKQI 50 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444333
No 92
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=31.12 E-value=94 Score=19.08 Aligned_cols=6 Identities=17% Similarity=0.473 Sum_probs=2.1
Q ss_pred HHHHHH
Q psy2823 87 MQEKVE 92 (122)
Q Consensus 87 lQ~elE 92 (122)
|-+-|.
T Consensus 28 L~~~L~ 33 (51)
T 3m91_A 28 LMETLK 33 (51)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 93
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=30.93 E-value=1.5e+02 Score=22.58 Aligned_cols=21 Identities=14% Similarity=0.294 Sum_probs=8.0
Q ss_pred HHHHHHHhhHHHHHHHHHHHh
Q psy2823 100 RLKAKLENTQGEMESMKEEYE 120 (122)
Q Consensus 100 rlq~elE~aQ~e~e~l~~ElE 120 (122)
+|+.+.++.+.+.+.+.+++|
T Consensus 163 ~LqkeNeRL~~E~n~~l~qlE 183 (184)
T 3w03_C 163 HLQKENERLLRDWNDVQGRFE 183 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 333333333333334444333
No 94
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=30.08 E-value=1.2e+02 Score=19.97 Aligned_cols=26 Identities=12% Similarity=0.135 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhH
Q psy2823 12 LSRLLSERDKAVLEMDKSKEELERSQ 37 (122)
Q Consensus 12 ~~rl~~E~eka~~e~ek~~eELErsQ 37 (122)
|..|+...+.+..++.++.-++.+.+
T Consensus 2 i~eLr~qi~~l~~e~~~l~~e~dn~~ 27 (86)
T 3swk_A 2 MRELRRQVDQLTNDKARVEVERDNLA 27 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 34455555555555555555555544
No 95
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=29.77 E-value=2.1e+02 Score=23.09 Aligned_cols=20 Identities=10% Similarity=0.017 Sum_probs=8.0
Q ss_pred HHHHHHHHhhHHHHHHHHHH
Q psy2823 99 YRLKAKLENTQGEMESMKEE 118 (122)
Q Consensus 99 ~rlq~elE~aQ~e~e~l~~E 118 (122)
.+++.+++++...+...+.+
T Consensus 167 eK~~~k~~k~~~~~~~a~ne 186 (406)
T 4dyl_A 167 DKAKDKYVRSLWKLFAHHNR 186 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444333333
No 96
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=29.27 E-value=1.6e+02 Score=21.50 Aligned_cols=10 Identities=20% Similarity=0.388 Sum_probs=3.9
Q ss_pred HHHHHHHHHH
Q psy2823 26 MDKSKEELER 35 (122)
Q Consensus 26 ~ek~~eELEr 35 (122)
++++++++..
T Consensus 27 le~l~~~l~~ 36 (135)
T 2e7s_A 27 YNQLKEDYNT 36 (135)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3334443333
No 97
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=29.08 E-value=1.8e+02 Score=21.58 Aligned_cols=34 Identities=6% Similarity=0.122 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHHH
Q psy2823 84 EKTMQEKVEKSQGEVYRLKAKLENTQGEMESMKE 117 (122)
Q Consensus 84 ~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~ 117 (122)
-..+..+.+.....+.-....++..|.++..|+.
T Consensus 110 ~~~~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK~ 143 (154)
T 2ocy_A 110 KYAIEILNKRLTEQLREKDTLLDTLTLQLKNLKK 143 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444555555555555555555555543
No 98
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=28.72 E-value=1.3e+02 Score=20.03 Aligned_cols=13 Identities=38% Similarity=0.726 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHH
Q psy2823 51 RLQEKYDKTCADL 63 (122)
Q Consensus 51 rlQekldk~~~El 63 (122)
|++|..+.+++||
T Consensus 15 rl~E~~~q~qaEl 27 (78)
T 3iv1_A 15 RMKEEMDRAQAEL 27 (78)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHH
Confidence 4566666666664
No 99
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=27.23 E-value=3.3e+02 Score=24.18 Aligned_cols=59 Identities=14% Similarity=0.190 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHH
Q psy2823 48 ELDRLQEKYDKTCADL------RRAQAELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLE 106 (122)
Q Consensus 48 EldrlQekldk~~~El------rr~Q~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE 106 (122)
++.+-||.-.|...|- ..+..++++.+++++.+-...+++++++.+++.-+.-++..|+
T Consensus 295 elkqrqeee~r~~qew~~~hp~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~ 359 (551)
T 2b5u_A 295 QVKQRQDEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELD 359 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 4444444444444443 3333344444444444455555566665655555544444443
No 100
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=25.78 E-value=2e+02 Score=21.10 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHH
Q psy2823 68 AELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESM 115 (122)
Q Consensus 68 ~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l 115 (122)
..+..-..|.|+.+..+..++++-.+-...+.++..+++.++.+.+.+
T Consensus 151 kKR~~k~lDyD~~~~~l~kl~~k~~kd~~kl~kae~el~~ak~~ye~l 198 (251)
T 2fic_A 151 AKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEM 198 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444454444444444333332334444455555555544433
No 101
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=25.75 E-value=1.3e+02 Score=23.44 Aligned_cols=24 Identities=21% Similarity=0.365 Sum_probs=9.5
Q ss_pred hhHHHHHHHHHHHHhhHHHHHHHH
Q psy2823 93 KSQGEVYRLKAKLENTQGEMESMK 116 (122)
Q Consensus 93 ksQ~e~~rlq~elE~aQ~e~e~l~ 116 (122)
+....+.....++..+=...+.++
T Consensus 194 k~~~~~~~a~~~Y~~~l~~~n~~~ 217 (320)
T 3m3w_A 194 RCTKEAEKMKTQYEQTLAELNRYT 217 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 333344444444444333333333
No 102
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=25.65 E-value=1.4e+02 Score=19.32 Aligned_cols=52 Identities=13% Similarity=0.196 Sum_probs=31.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHHHHh--h--hhhHHHHHHHHHHHHHHHHHH
Q psy2823 13 SRLLSERDKAVLEMDKSKEELERSQATLAT--L--STSAELDRLQEKYDKTCADLR 64 (122)
Q Consensus 13 ~rl~~E~eka~~e~ek~~eELErsQatl~~--l--~tq~EldrlQekldk~~~Elr 64 (122)
+..+-|++.+...++++..++...++.++. + +-...+..+..+++....+|.
T Consensus 18 ykeqrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe 73 (89)
T 2lw1_A 18 YKLQRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELE 73 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 456777788888888887777777777743 1 122344444444444444443
No 103
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=24.51 E-value=1.8e+02 Score=21.90 Aligned_cols=49 Identities=14% Similarity=0.216 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHHHHH
Q psy2823 68 AELRVVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEMESMK 116 (122)
Q Consensus 68 ~ele~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~ 116 (122)
..+..-..|.|+.+..+..++++-.+-..-+.++..+++.++...+.+-
T Consensus 132 ~KR~~kllDyd~~~~~~~kl~~k~~kd~~kl~kae~el~~a~~~ye~lN 180 (237)
T 4avm_A 132 AKRGRKLVDYDSARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDLN 180 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555555555554333333445555555555555554443
No 104
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=24.16 E-value=1.4e+02 Score=18.64 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=17.2
Q ss_pred HHHHHHhhHHHHHHHHHHHHhhHHHHHHHHHHH
Q psy2823 87 MQEKVEKSQGEVYRLKAKLENTQGEMESMKEEY 119 (122)
Q Consensus 87 lQ~elEksQ~e~~rlq~elE~aQ~e~e~l~~El 119 (122)
-+..+..++..+..|..+......++..|+.+|
T Consensus 28 K~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 28 KLQRMKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445555555555555555666665554
No 105
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=23.14 E-value=1.8e+02 Score=19.70 Aligned_cols=42 Identities=14% Similarity=0.221 Sum_probs=26.4
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhHHHHHHHHHHHHhhHHHHH
Q psy2823 72 VVQADNERVRSEEKTMQEKVEKSQGEVYRLKAKLENTQGEME 113 (122)
Q Consensus 72 ~tQ~~~e~~q~e~~~lQ~elEksQ~e~~rlq~elE~aQ~e~e 113 (122)
.-+.-+..+..++..|.+.++....++.+|+.+.+....-.+
T Consensus 28 ~Rr~AL~eaL~EN~~Lh~~ie~~~eEi~~Lk~en~~L~elA~ 69 (83)
T 1wlq_A 28 QRRKALYEALKENEKLHKEIEQKDSEIARLRKENKDLAEVAE 69 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556666666777777777777777776666554433
No 106
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=21.71 E-value=3.4e+02 Score=22.32 Aligned_cols=25 Identities=28% Similarity=0.525 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHh
Q psy2823 96 GEVYRLKAKLENTQGEMESMKEEYE 120 (122)
Q Consensus 96 ~e~~rlq~elE~aQ~e~e~l~~ElE 120 (122)
-++.+++.+++++...++....+|.
T Consensus 185 k~~eK~~~k~~k~~~~~~~a~~~Y~ 209 (486)
T 3haj_A 185 EQLKKLQDKIEKCKQDVLKTKEKYE 209 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466666666666666666666553
Done!