Query psy2824
Match_columns 242
No_of_seqs 115 out of 251
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 17:52:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2824.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2824hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3syx_A Sprouty-related, EVH1 d 19.9 29 0.00098 27.9 0.6 15 128-142 21-35 (130)
2 1evs_A Oncostatin M; 4-helix b 14.7 83 0.0028 26.5 2.2 47 56-106 107-153 (187)
3 1xod_A Spred1; sprouty, EVH1, 14.2 52 0.0018 25.5 0.8 15 128-142 14-28 (118)
4 2jp2_A Spred-2, sprouty-relate 12.2 62 0.0021 25.5 0.8 15 128-142 23-37 (126)
5 2v7q_J ATPase inhibitor; ION t 10.8 3.5E+02 0.012 19.2 4.3 30 166-195 19-49 (66)
6 1evh_A WH1 domain, protein (ME 10.5 72 0.0025 24.4 0.6 15 128-142 14-28 (112)
7 2l09_A ASR4154 protein; proto- 10.4 1.1E+02 0.0037 21.6 1.4 13 109-121 26-38 (62)
8 3bbn_T Ribosomal protein S20; 10.2 4.1E+02 0.014 22.8 5.3 19 178-196 92-110 (202)
9 1ddw_A GLGF-domain protein hom 10.0 81 0.0028 24.5 0.7 14 128-141 14-28 (120)
10 1egx_A VAsp, vasodilator-stimu 9.9 89 0.003 24.0 0.9 15 128-142 14-28 (115)
No 1
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=19.92 E-value=29 Score=27.93 Aligned_cols=15 Identities=33% Similarity=0.570 Sum_probs=13.0
Q ss_pred cccccccCceecccc
Q psy2824 128 KKWDDILKEWVPTYG 142 (242)
Q Consensus 128 ~v~DE~~~eW~prwG 142 (242)
|+||+.++.|+|-=|
T Consensus 21 m~~Dd~tk~WlP~gg 35 (130)
T 3syx_A 21 MTRDDSSGGWLPLGG 35 (130)
T ss_dssp EEECSSSSCEEESSS
T ss_pred eeEcCCCCceEeCCC
Confidence 899999999999643
No 2
>1evs_A Oncostatin M; 4-helix bundle, GP130 binding cytokine; 2.20A {Homo sapiens} SCOP: a.26.1.1
Probab=14.66 E-value=83 Score=26.47 Aligned_cols=47 Identities=19% Similarity=0.095 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCccccCCceeeecCCCCcCCCCCCCCCCC
Q psy2824 56 DKYLKDLTRDNTQLLINKIWELPTERRDEDIVATLPDPTYILPREKPLPKI 106 (242)
Q Consensus 56 e~~L~~~ardn~Q~Lin~l~~Lp~e~~~~g~~a~LP~p~t~lPReKPlPk~ 106 (242)
...-.+.||-|++-+-|.|+-+-.--. +.. .++||..-|...|+|.|
T Consensus 107 ~~~~~~~a~~ni~G~rNNi~CMaqLL~--~s~--~aepTqa~~gasp~~~p 153 (187)
T 1evs_A 107 DLEKLQMARPNILGLRNNIYCMAQLLD--NSD--TAEPTKAGRGASQPPTP 153 (187)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSC--C---------------------
T ss_pred HHHHHhhhccchhhhhhhHHHHHHHcC--Ccc--CCCCCCCCCCCCCCCCC
Confidence 345567899999999999886211111 111 67888888888887666
No 3
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=14.16 E-value=52 Score=25.52 Aligned_cols=15 Identities=27% Similarity=0.397 Sum_probs=13.6
Q ss_pred cccccccCceecccc
Q psy2824 128 KKWDDILKEWVPTYG 142 (242)
Q Consensus 128 ~v~DE~~~eW~prwG 142 (242)
|+||+.++.|+|.-|
T Consensus 14 ~~~d~~~~~W~p~~~ 28 (118)
T 1xod_A 14 MTRDDSSGGWLQLGG 28 (118)
T ss_dssp EEECSSSSCEEEGGG
T ss_pred eeEcCCCCCEeeCCC
Confidence 789999999999875
No 4
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=12.19 E-value=62 Score=25.46 Aligned_cols=15 Identities=33% Similarity=0.590 Sum_probs=13.7
Q ss_pred cccccccCceecccc
Q psy2824 128 KKWDDILKEWVPTYG 142 (242)
Q Consensus 128 ~v~DE~~~eW~prwG 142 (242)
|+||+.++.|+|.-|
T Consensus 23 m~~D~~~~~W~p~~~ 37 (126)
T 2jp2_A 23 MTRDDSSGGWFPQEG 37 (126)
T ss_dssp EEECTTSSSSEECSC
T ss_pred eeEcCCCCCEeeCCC
Confidence 789999999999885
No 5
>2v7q_J ATPase inhibitor; ION transport, mitochondrion, transit peptide, inhibitor Pro hydrolase; HET: ATP ADP; 2.1A {Bos taurus} SCOP: h.4.8.1
Probab=10.79 E-value=3.5e+02 Score=19.25 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=23.7
Q ss_pred cCHHHHHHHHHHHH-HHhhHHHHHHHhhhhc
Q psy2824 166 EDQFAKKSAAQKER-VARNEYQRLRNIARSN 195 (242)
Q Consensus 166 eDpf~~~~~eKker-v~KNe~~~~rN~~~a~ 195 (242)
-|-|.++..+..+. ..+.+..+|+||+...
T Consensus 19 GgaFGKrEaA~Ee~Yfrk~ekEQL~~LKkkl 49 (66)
T 2v7q_J 19 GGAFGKREQAEEERYFRARAKEQLAALKKHH 49 (66)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcccchHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 48899998888777 5677778899987653
No 6
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=10.48 E-value=72 Score=24.38 Aligned_cols=15 Identities=47% Similarity=0.875 Sum_probs=13.6
Q ss_pred cccccccCceecccc
Q psy2824 128 KKWDDILKEWVPTYG 142 (242)
Q Consensus 128 ~v~DE~~~eW~prwG 142 (242)
++||+.++.|+|.-|
T Consensus 14 ~~~d~~~~~W~p~~~ 28 (112)
T 1evh_A 14 MVYDDANKKWVPAGG 28 (112)
T ss_dssp EEEETTTTEEEEGGG
T ss_pred EEEcCCCCceEECCC
Confidence 689999999999985
No 7
>2l09_A ASR4154 protein; proto-chlorophyllide reductase 57 KD subunit superfamily, ST genomics, PSI-2, protein structure initiative; NMR {Nostoc SP}
Probab=10.39 E-value=1.1e+02 Score=21.61 Aligned_cols=13 Identities=15% Similarity=0.189 Sum_probs=10.3
Q ss_pred CcHHHHHHHhCCc
Q psy2824 109 TKWEEFALEKGIR 121 (242)
Q Consensus 109 TkWE~FA~~KGI~ 121 (242)
.+=|+||+++||.
T Consensus 26 r~tE~~Are~G~~ 38 (62)
T 2l09_A 26 ARIEQLARQAEQD 38 (62)
T ss_dssp HHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCC
Confidence 3458999999984
No 8
>3bbn_T Ribosomal protein S20; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=10.19 E-value=4.1e+02 Score=22.78 Aligned_cols=19 Identities=21% Similarity=0.387 Sum_probs=15.0
Q ss_pred HHHHhhHHHHHHHhhhhcC
Q psy2824 178 ERVARNEYQRLRNIARSNK 196 (242)
Q Consensus 178 erv~KNe~~~~rN~~~a~~ 196 (242)
.|+..||.++++|..+-..
T Consensus 92 KRiRqneKRRlrNka~KS~ 110 (202)
T 3bbn_T 92 KRARQAEKRRVYNKSKKSE 110 (202)
T ss_dssp HHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788899999999876543
No 9
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=9.99 E-value=81 Score=24.53 Aligned_cols=14 Identities=43% Similarity=0.624 Sum_probs=11.7
Q ss_pred cccccccC-ceeccc
Q psy2824 128 KKWDDILK-EWVPTY 141 (242)
Q Consensus 128 ~v~DE~~~-eW~prw 141 (242)
|+||+.++ .|+|.=
T Consensus 14 ~~~D~~tk~~W~p~g 28 (120)
T 1ddw_A 14 FQIDPNTKKNWVPTS 28 (120)
T ss_dssp EEECTTTSCSEEESC
T ss_pred EEEcCCCCCceEeCC
Confidence 78999996 999943
No 10
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=9.95 E-value=89 Score=24.01 Aligned_cols=15 Identities=33% Similarity=0.561 Sum_probs=13.4
Q ss_pred cccccccCceecccc
Q psy2824 128 KKWDDILKEWVPTYG 142 (242)
Q Consensus 128 ~v~DE~~~eW~prwG 142 (242)
|+||+.++.|+|.-+
T Consensus 14 ~~~d~~~~~W~p~~~ 28 (115)
T 1egx_A 14 MLYDDGNKRWLPAGT 28 (115)
T ss_dssp BEECTTTSSCCBSSC
T ss_pred EEEcCCCCceeECCC
Confidence 789999999999884
Done!