Your job contains 1 sequence.
>psy2829
MAEPKRFHFGRPHLLPLATYAKAEPQQSCVMIIRLLRHLGQAWNLINPWALELLVEKVIA
SAGLPLSPGDALRRVFEAVASGLLLESGPGLLDPCEKEPRDALANMPAQDREDVTIHKLL
GMEQLKLKRGFGGSRSANRKRRRDTSSGEKEDGGVKKDKKEEEESAAIKTETMETK
The BLAST search returned 15 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2829
(176 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-378 - symbol:zfr "zinc finger RNA bi... 268 1.4e-22 2
ZFIN|ZDB-GENE-070705-184 - symbol:zfr2 "zinc finger RNA b... 256 2.0e-22 2
UNIPROTKB|F1N0Y9 - symbol:ZFR "Uncharacterized protein" s... 266 9.6e-22 1
UNIPROTKB|E2R6T6 - symbol:ZFR "Uncharacterized protein" s... 266 1.0e-21 1
UNIPROTKB|Q96KR1 - symbol:ZFR "Zinc finger RNA-binding pr... 266 1.0e-21 1
MGI|MGI:1341890 - symbol:Zfr "zinc finger RNA binding pro... 266 1.0e-21 1
RGD|1311890 - symbol:Zfr "zinc finger RNA binding protein... 265 1.3e-21 1
UNIPROTKB|Q562A2 - symbol:Zfr "Zinc finger RNA-binding pr... 265 1.3e-21 1
UNIPROTKB|F1N855 - symbol:LOC427010 "Uncharacterized prot... 260 4.2e-21 1
UNIPROTKB|F1NLI6 - symbol:LOC427010 "Uncharacterized prot... 258 7.3e-21 1
FB|FBgn0263603 - symbol:Zn72D "Zinc-finger protein at 72D... 256 8.8e-21 1
UNIPROTKB|I3LCI4 - symbol:ZFR "Uncharacterized protein" s... 242 1.0e-19 1
UNIPROTKB|D4A148 - symbol:D4A148 "Uncharacterized protein... 246 1.0e-19 1
UNIPROTKB|F1S7P2 - symbol:ZFR2 "Uncharacterized protein" ... 238 8.2e-19 1
UNIPROTKB|F1MWK5 - symbol:F1MWK5 "Uncharacterized protein... 234 2.3e-18 1
UNIPROTKB|F1Q153 - symbol:ZFR2 "Uncharacterized protein" ... 229 7.8e-18 1
UNIPROTKB|I3LE06 - symbol:ZFR2 "Uncharacterized protein" ... 227 1.2e-17 1
UNIPROTKB|Q9UPR6 - symbol:ZFR2 "Zinc finger RNA-binding p... 226 1.6e-17 1
RGD|620673 - symbol:Strbp "spermatid perinuclear RNA bind... 190 2.0e-15 2
UNIPROTKB|Q9JKU6 - symbol:Strbp "Spermatid perinuclear RN... 190 2.0e-15 2
MGI|MGI:104626 - symbol:Strbp "spermatid perinuclear RNA ... 191 2.5e-15 2
UNIPROTKB|Q08E27 - symbol:STRBP "Spermatid perinuclear RN... 190 3.3e-15 2
UNIPROTKB|E2RC52 - symbol:STRBP "Uncharacterized protein"... 190 3.3e-15 2
UNIPROTKB|Q96SI9 - symbol:STRBP "Spermatid perinuclear RN... 190 3.3e-15 2
UNIPROTKB|E1BTT5 - symbol:STRBP "Spermatid perinuclear RN... 189 4.1e-15 2
UNIPROTKB|Q5ZIL4 - symbol:STRBP "Spermatid perinuclear RN... 189 4.1e-15 2
UNIPROTKB|F6XZ19 - symbol:ZFR "Uncharacterized protein" s... 203 5.5e-15 1
UNIPROTKB|K7GM70 - symbol:ILF3 "Uncharacterized protein" ... 199 7.5e-15 1
UNIPROTKB|K7GL83 - symbol:ILF3 "Uncharacterized protein" ... 199 7.8e-15 1
UNIPROTKB|F1S585 - symbol:ILF3 "Uncharacterized protein" ... 199 8.3e-15 1
UNIPROTKB|K7GP99 - symbol:ILF3 "Uncharacterized protein" ... 199 9.7e-15 1
UNIPROTKB|Q6GL57 - symbol:ilf3 "Interleukin enhancer-bind... 198 9.9e-15 1
UNIPROTKB|Q12906 - symbol:ILF3 "Interleukin enhancer-bind... 199 1.1e-14 1
UNIPROTKB|F1PGB6 - symbol:ILF3 "Uncharacterized protein" ... 199 1.1e-14 1
RGD|619734 - symbol:Ilf3 "interleukin enhancer binding fa... 199 1.1e-14 1
UNIPROTKB|Q9JIL3 - symbol:Ilf3 "Interleukin enhancer-bind... 199 1.1e-14 1
UNIPROTKB|G5E9M5 - symbol:ILF3 "Interleukin enhancer-bind... 199 1.1e-14 1
MGI|MGI:1339973 - symbol:Ilf3 "interleukin enhancer bindi... 199 1.1e-14 1
UNIPROTKB|F1LRU1 - symbol:Ilf3 "Interleukin enhancer-bind... 199 1.2e-14 1
UNIPROTKB|F1LNJ4 - symbol:Ilf3 "Interleukin enhancer-bind... 199 1.2e-14 1
ZFIN|ZDB-GENE-030131-587 - symbol:ilf3b "interleukin enha... 198 1.3e-14 1
RGD|1304737 - symbol:Zfr2 "zinc finger RNA binding protei... 191 2.4e-14 1
UNIPROTKB|Q91550 - symbol:ilf3-a "Interleukin enhancer-bi... 196 2.4e-14 1
UNIPROTKB|Q2TAV5 - symbol:ilf3 "CBTF122 protein" species:... 196 2.4e-14 1
UNIPROTKB|Q6DD04 - symbol:ilf3-b "Interleukin enhancer-bi... 195 3.0e-14 1
ZFIN|ZDB-GENE-030729-18 - symbol:strbp "spermatid perinuc... 189 9.0e-14 1
UNIPROTKB|F1SKU5 - symbol:STRBP "Uncharacterized protein"... 174 1.7e-13 2
UNIPROTKB|F1MMA0 - symbol:ILF3 "Uncharacterized protein" ... 185 3.5e-13 1
ZFIN|ZDB-GENE-030131-3151 - symbol:ilf3a "interleukin enh... 179 1.4e-12 1
UNIPROTKB|J9NWA2 - symbol:ZFR "Uncharacterized protein" s... 170 1.6e-11 1
UNIPROTKB|F1M3L8 - symbol:F1M3L8 "Uncharacterized protein... 154 3.8e-10 1
>ZFIN|ZDB-GENE-030131-378 [details] [associations]
symbol:zfr "zinc finger RNA binding protein"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 SMART:SM00451
ZFIN:ZDB-GENE-030131-378 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 eggNOG:NOG292385 HOGENOM:HOG000232147
HOVERGEN:HBG108765 OrthoDB:EOG4HX511 EMBL:BC059198 IPI:IPI00483929
RefSeq:NP_955852.1 UniGene:Dr.26724 ProteinModelPortal:Q6PCR6
STRING:Q6PCR6 GeneID:321659 KEGG:dre:321659 CTD:51663
InParanoid:Q6PCR6 KO:K13203 NextBio:20807476 ArrayExpress:Q6PCR6
Uniprot:Q6PCR6
Length = 1074
Score = 268 (99.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 66/143 (46%), Positives = 80/143 (55%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV++IR+LR L Q W+ WA+ELLVEK I+SA P+SPGDALRRVFE
Sbjct: 913 ARANGLQSCVIVIRILRDLCQRVPTWSAFPSWAMELLVEKAISSASGPMSPGDALRRVFE 972
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK P D LA M Q RED+T IHK+LGM+
Sbjct: 973 CISSGILLSGAPGLIDPCEKNPTDTLAFMEEQQREDITSSAQFALRLLAFRQIHKVLGMD 1032
Query: 124 QLKLKRGFGGSRSANRKRRRDTS 146
L R+ RKRRRD S
Sbjct: 1033 PLPQMNSRFNVRNT-RKRRRDNS 1054
Score = 33 (16.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 1 MAEPKRFHFGRPHLLPLATYAKAEPQ 26
+A + ++ +P P A A+PQ
Sbjct: 147 VAYDSKQYYQQPAATPAVAAAAAQPQ 172
>ZFIN|ZDB-GENE-070705-184 [details] [associations]
symbol:zfr2 "zinc finger RNA binding protein 2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355
SMART:SM00451 ZFIN:ZDB-GENE-070705-184 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 EMBL:CR936300 IPI:IPI01023707
Ensembl:ENSDART00000122341 ArrayExpress:F6PD25 Uniprot:F6PD25
Length = 1011
Score = 256 (95.2 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 66/139 (47%), Positives = 80/139 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W + WA+EL+VEK I+SA PLSPG+ALRRV E
Sbjct: 853 ARANGLQSCVIIIRVLRDLCQRIPTWGKMPNWAMELIVEKAISSASGPLSPGEALRRVLE 912
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVTIH-----KLLGMEQLKLKRGFG 132
+A DPCEK DAL M Q REDVT + +LL Q+ G G
Sbjct: 913 CIATGILLPDGPGLLDPCEKGQTDALGTMSKQAREDVTANAQHALRLLAFRQIHKVLGMG 972
Query: 133 G---SRSA--NRKRRRDTS 146
S++A NRKRRRD S
Sbjct: 973 SLPVSKAAARNRKRRRDGS 991
Score = 43 (20.2 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 1 MAEPKRFHFGRPHLLPLATYAKAEPQQSCV 30
+ EP+ + +GRP P+++Y + Q+ +
Sbjct: 109 LTEPENYTYGRPP--PVSSYENKQYFQTSI 136
>UNIPROTKB|F1N0Y9 [details] [associations]
symbol:ZFR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0005634 GO:GO:0008270 GO:GO:0003676
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 OMA:EDAKMAT EMBL:DAAA02050691 IPI:IPI00686368
Ensembl:ENSBTAT00000011072 Uniprot:F1N0Y9
Length = 1030
Score = 266 (98.7 bits), Expect = 9.6e-22, P = 9.6e-22
Identities = 67/143 (46%), Positives = 83/143 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 870 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 929
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+P D LA M Q RED+T IHK+LGM+
Sbjct: 930 CISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGMD 989
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 990 PLPQMNQRFNIHN--NRKRRRDS 1010
>UNIPROTKB|E2R6T6 [details] [associations]
symbol:ZFR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 CTD:51663 KO:K13203 RefSeq:XP_868220.2
Ensembl:ENSCAFT00000029995 GeneID:489239 KEGG:cfa:489239
NextBio:20862439 Uniprot:E2R6T6
Length = 1073
Score = 266 (98.7 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 67/143 (46%), Positives = 83/143 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 913 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 972
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+P D LA M Q RED+T IHK+LGM+
Sbjct: 973 CISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGMD 1032
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 1033 PLPQMSQRFNIHN--NRKRRRDS 1053
>UNIPROTKB|Q96KR1 [details] [associations]
symbol:ZFR "Zinc finger RNA-binding protein" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0005694
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 eggNOG:NOG292385 HOVERGEN:HBG108765
OrthoDB:EOG4HX511 CTD:51663 KO:K13203 EMBL:AJ314790 EMBL:AC008949
EMBL:BC030540 EMBL:BC051893 EMBL:BC062986 EMBL:BC107417
EMBL:BC137084 EMBL:AF100742 EMBL:AK025481 EMBL:AL137258
IPI:IPI00784224 PIR:T46329 RefSeq:NP_057191.2 UniGene:Hs.435231
ProteinModelPortal:Q96KR1 SMR:Q96KR1 DIP:DIP-47293N IntAct:Q96KR1
STRING:Q96KR1 PhosphoSite:Q96KR1 DMDM:162416228 PaxDb:Q96KR1
PRIDE:Q96KR1 Ensembl:ENST00000265069 GeneID:51663 KEGG:hsa:51663
UCSC:uc003jhr.1 GeneCards:GC05M032390 H-InvDB:HIX0004787
HGNC:HGNC:17277 HPA:HPA016666 neXtProt:NX_Q96KR1 PharmGKB:PA38219
InParanoid:Q96KR1 OMA:EDAKMAT ChiTaRS:ZFR GenomeRNAi:51663
NextBio:55646 ArrayExpress:Q96KR1 Bgee:Q96KR1 CleanEx:HS_ZFR
Genevestigator:Q96KR1 Uniprot:Q96KR1
Length = 1074
Score = 266 (98.7 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 67/143 (46%), Positives = 83/143 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 914 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 973
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+P D LA M Q RED+T IHK+LGM+
Sbjct: 974 CISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGMD 1033
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 1034 PLPQMSQRFNIHN--NRKRRRDS 1054
>MGI|MGI:1341890 [details] [associations]
symbol:Zfr "zinc finger RNA binding protein" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
MGI:MGI:1341890 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 eggNOG:NOG292385 HOGENOM:HOG000232147
HOVERGEN:HBG108765 CTD:51663 KO:K13203 OMA:EDAKMAT ChiTaRS:ZFR
EMBL:AF071059 EMBL:BC006962 EMBL:BC038599 EMBL:BC058570
EMBL:AK011329 EMBL:AK034963 EMBL:AK158938 IPI:IPI00131810
PIR:T14343 RefSeq:NP_035897.2 UniGene:Mm.273496
ProteinModelPortal:O88532 SMR:O88532 IntAct:O88532 STRING:O88532
PhosphoSite:O88532 PaxDb:O88532 PRIDE:O88532
Ensembl:ENSMUST00000122941 GeneID:22763 KEGG:mmu:22763
UCSC:uc007vhk.2 InParanoid:O88532 NextBio:303285 Bgee:O88532
CleanEx:MM_ZFR Genevestigator:O88532 Uniprot:O88532
Length = 1074
Score = 266 (98.7 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 67/143 (46%), Positives = 83/143 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 914 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 973
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+P D LA M Q RED+T IHK+LGM+
Sbjct: 974 CISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGMD 1033
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 1034 PLPQMNQRFNIHN--NRKRRRDS 1054
>RGD|1311890 [details] [associations]
symbol:Zfr "zinc finger RNA binding protein" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
RGD:1311890 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0005694
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 EMBL:AABR03012204 eggNOG:NOG292385
HOGENOM:HOG000232147 HOVERGEN:HBG108765 EMBL:AABR03015519
EMBL:AABR03021812 EMBL:AABR03017146 EMBL:AABR03016281 EMBL:BC092648
IPI:IPI00367952 UniGene:Rn.11634 STRING:Q562A2 PhosphoSite:Q562A2
PRIDE:Q562A2 Ensembl:ENSRNOT00000016196 InParanoid:Q562A2
NextBio:687912 ArrayExpress:Q562A2 Genevestigator:Q562A2
Uniprot:Q562A2
Length = 1073
Score = 265 (98.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 67/143 (46%), Positives = 83/143 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 913 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 972
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+P D LA M Q RED+T IHK+LGM+
Sbjct: 973 CISSGIILKGNPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGMD 1032
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 1033 PLPQMNQRFNIHN--NRKRRRDS 1053
>UNIPROTKB|Q562A2 [details] [associations]
symbol:Zfr "Zinc finger RNA-binding protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR003604 InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 SMART:SM00451 RGD:1311890
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0005694
GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 EMBL:AABR03012204 eggNOG:NOG292385
HOGENOM:HOG000232147 HOVERGEN:HBG108765 EMBL:AABR03015519
EMBL:AABR03021812 EMBL:AABR03017146 EMBL:AABR03016281 EMBL:BC092648
IPI:IPI00367952 UniGene:Rn.11634 STRING:Q562A2 PhosphoSite:Q562A2
PRIDE:Q562A2 Ensembl:ENSRNOT00000016196 InParanoid:Q562A2
NextBio:687912 ArrayExpress:Q562A2 Genevestigator:Q562A2
Uniprot:Q562A2
Length = 1073
Score = 265 (98.3 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 67/143 (46%), Positives = 83/143 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 913 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 972
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+P D LA M Q RED+T IHK+LGM+
Sbjct: 973 CISSGIILKGNPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRLLAFRQIHKVLGMD 1032
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 1033 PLPQMNQRFNIHN--NRKRRRDS 1053
>UNIPROTKB|F1N855 [details] [associations]
symbol:LOC427010 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 EMBL:AADN02047175 EMBL:AADN02047176 EMBL:AADN02047177
IPI:IPI01017406 Ensembl:ENSGALT00000023466 OMA:CNVTCTG
Uniprot:F1N855
Length = 1025
Score = 260 (96.6 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 67/143 (46%), Positives = 83/143 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 865 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFE 924
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+P D LA M Q RED+T IHK+LGM+
Sbjct: 925 CISSGIILKGGPGILDPCEKDPFDTLAVMTDQQREDITSSAQFALKLLAFRQIHKVLGMD 984
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 985 PLPQMNQRFNTHN--NRKRRRDS 1005
>UNIPROTKB|F1NLI6 [details] [associations]
symbol:LOC427010 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 OMA:EDAKMAT EMBL:AADN02060502 EMBL:AADN02060503
EMBL:AADN02060504 IPI:IPI00583793 Ensembl:ENSGALT00000005121
Uniprot:F1NLI6
Length = 1075
Score = 258 (95.9 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 67/143 (46%), Positives = 83/143 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 915 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSATGPQSPGDALRRVFE 974
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+P D LA M Q RED+T IHK+LGM+
Sbjct: 975 CISSGIILKGGPGLLDPCEKDPFDTLAVMTDQQREDITSSAQFALRLLAFRQIHKVLGMD 1034
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 1035 PLPQMNQRFNIHN--NRKRRRDS 1055
>FB|FBgn0263603 [details] [associations]
symbol:Zn72D "Zinc-finger protein at 72D" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0006911 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 InterPro:IPR022755
Pfam:PF12171 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 eggNOG:NOG292385 KO:K13203 OMA:REDITVS
RefSeq:NP_788510.1 UniGene:Dm.1856 ProteinModelPortal:Q86BI3
SMR:Q86BI3 DIP:DIP-18693N IntAct:Q86BI3 STRING:Q86BI3 PaxDb:Q86BI3
PRIDE:Q86BI3 EnsemblMetazoa:FBtr0075494 EnsemblMetazoa:FBtr0310581
EnsemblMetazoa:FBtr0310582 EnsemblMetazoa:FBtr0333294 GeneID:39764
KEGG:dme:Dmel_CG5215 UCSC:CG5215-RB CTD:39764 FlyBase:FBgn0263603
InParanoid:Q86BI3 OrthoDB:EOG495X70 PhylomeDB:Q86BI3
GenomeRNAi:39764 NextBio:815259 ArrayExpress:Q86BI3 Bgee:Q86BI3
Uniprot:Q86BI3
Length = 884
Score = 256 (95.2 bits), Expect = 8.8e-21, P = 8.8e-21
Identities = 63/142 (44%), Positives = 83/142 (58%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCVM+IR+LR L Q +W + W+LELLVEKVI+SAG P+SPGD +RR+ E
Sbjct: 706 ARATGLQSCVMVIRILRDLCQRVSSWQSLPQWSLELLVEKVISSAGFPISPGDCMRRIME 765
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
A++ DPCEK+P DAL + Q+RED+T I+K+LGME
Sbjct: 766 ALSSGFLINGPGLL-DPCEKDPTDALLELTKQEREDLTVSAQLFLRYIAFRQIYKVLGME 824
Query: 124 QLKLKRGFGGSRSANRKRRRDT 145
L + NRKRRR +
Sbjct: 825 PLPAMKFPMRPWRVNRKRRRSS 846
>UNIPROTKB|I3LCI4 [details] [associations]
symbol:ZFR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 Ensembl:ENSSSCT00000025090 OMA:CSEKPTR Uniprot:I3LCI4
Length = 528
Score = 242 (90.2 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 52/98 (53%), Positives = 62/98 (63%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 422 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 481
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
++ DPCEK+P D LA M Q RED+T
Sbjct: 482 CISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDIT 519
>UNIPROTKB|D4A148 [details] [associations]
symbol:D4A148 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006955 "immune response" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR003604
InterPro:IPR006116 InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 PROSITE:PS50152 SMART:SM00355 SMART:SM00451
GO:GO:0005524 GO:GO:0006955 GO:GO:0016740 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 GeneTree:ENSGT00550000074528
InterPro:IPR006561 Pfam:PF07528 SMART:SM00572 OrthoDB:EOG4HX511
IPI:IPI00780563 Ensembl:ENSRNOT00000061132 ArrayExpress:D4A148
Uniprot:D4A148
Length = 871
Score = 246 (91.7 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 64/143 (44%), Positives = 79/143 (55%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQA---WNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A Q CV++IR+LR L + W + WA+ELLVEKV++SA PLSPGDA+RRV E
Sbjct: 714 ARASGLQPCVIVIRVLRDLCRCLPPWGALPAWAMELLVEKVLSSAPRPLSPGDAMRRVLE 773
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
VA DPCEK P+DAL M Q RED+T IHK+L ME
Sbjct: 774 YVATGALLTDGPGLQDPCEKGPQDALEPMTPQQREDLTASAQHALRLVAFRQIHKVLHME 833
Query: 124 QLKLKRGFGGSRSANRKRRRDTS 146
L + FG RKR R+ S
Sbjct: 834 HLPPRTRFGA-----RKRMREAS 851
>UNIPROTKB|F1S7P2 [details] [associations]
symbol:ZFR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 OMA:QDPCERD EMBL:FP102497 Ensembl:ENSSSCT00000014741
Uniprot:F1S7P2
Length = 937
Score = 238 (88.8 bits), Expect = 8.2e-19, P = 8.2e-19
Identities = 59/141 (41%), Positives = 79/141 (56%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A Q CV++IR+LR L Q W + WA+ELLVEK ++S PLSPGDA+RRV E
Sbjct: 782 ARASGLQPCVIVIRILRDLCQRVPTWGALPDWAMELLVEKALSSTKGPLSPGDAVRRVLE 841
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
VA DPCE++ DAL +M Q+RED+T IHK+LG++
Sbjct: 842 CVASGTLLTDGPGLQDPCERDQMDALGSMTLQEREDITASAQHALRMLAFRQIHKILGID 901
Query: 124 QLKLKRGFGGSRSANRKRRRD 144
L + G+R RKR R+
Sbjct: 902 PLPPPKSRPGARF--RKRPRE 920
>UNIPROTKB|F1MWK5 [details] [associations]
symbol:F1MWK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 OMA:QDPCERD EMBL:DAAA02019633 IPI:IPI00711408
Ensembl:ENSBTAT00000001004 Uniprot:F1MWK5
Length = 970
Score = 234 (87.4 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 60/143 (41%), Positives = 79/143 (55%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A Q CV++IR+ R L Q W + WA+ELLVEK ++S PLSPGDA+RRV E
Sbjct: 810 ARASGLQPCVIVIRVFRDLCQRVPTWGALPDWAMELLVEKALSSTKGPLSPGDAVRRVLE 869
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
VA DPCE++ DAL +M Q+RED+T IHK+LG++
Sbjct: 870 CVASGTLLTDGPGLQDPCERDQMDALGSMTLQEREDITASAQHALRMLAFRQIHKILGID 929
Query: 124 QLKLKRGFGGSRSANRKRRRDTS 146
L R G+R RKR R+ S
Sbjct: 930 PLPPPRIRLGARF--RKRPREAS 950
>UNIPROTKB|F1Q153 [details] [associations]
symbol:ZFR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 OMA:QDPCERD EMBL:AAEX03012573
Ensembl:ENSCAFT00000030437 Uniprot:F1Q153
Length = 964
Score = 229 (85.7 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 61/141 (43%), Positives = 76/141 (53%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+++R+LR L Q W + WALELLVEK ++SA L+PGD LRRV E
Sbjct: 804 ARASGLQSCVIVLRVLRDLCQRVPTWGALPDWALELLVEKALSSACGRLNPGDGLRRVLE 863
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
VA DPCE++ RD L +M Q RED+T IH +LGME
Sbjct: 864 CVASGTLLPDGPGLQDPCERDQRDTLESMTPQQREDLTATAQHALRLLAFRQIHTILGME 923
Query: 124 QLKLKRGFGGSRSANRKRRRD 144
L R G R RKR R+
Sbjct: 924 PLPPPRSRPGPRF--RKRLRE 942
>UNIPROTKB|I3LE06 [details] [associations]
symbol:ZFR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 EMBL:FP102497 Ensembl:ENSSSCT00000026925
Uniprot:I3LE06
Length = 908
Score = 227 (85.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 47/98 (47%), Positives = 61/98 (62%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A Q CV++IR+LR L Q W + WA+ELLVEK ++S PLSPGDA+RRV E
Sbjct: 787 ARASGLQPCVIVIRILRDLCQRVPTWGALPDWAMELLVEKALSSTKGPLSPGDAVRRVLE 846
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
VA DPCE++ DAL +M Q+RED+T
Sbjct: 847 CVASGTLLTDGPGLQDPCERDQMDALGSMTLQEREDIT 884
Score = 193 (73.0 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 46/116 (39%), Positives = 62/116 (53%)
Query: 24 EPQQSCVMIIRLLRHLGQAWNLINPWALELLVEKVIASAGLPLSPGDALRRVFEAVAXXX 83
+P + I+R L W + WA+ELLVEK ++S PLSPGDA+RRV E VA
Sbjct: 793 QPCVIVIRILRDLCQRVPTWGALPDWAMELLVEKALSSTKGPLSPGDAVRRVLECVASGT 852
Query: 84 XXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGMEQL 125
DPCE++ DAL +M Q+RED+T IHK+LG++ L
Sbjct: 853 LLTDGPGLQDPCERDQMDALGSMTLQEREDITASAQHALRMLAFRQIHKILGIDPL 908
>UNIPROTKB|Q9UPR6 [details] [associations]
symbol:ZFR2 "Zinc finger RNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 EMBL:AC005777 EMBL:AC004598
EMBL:AC093078 EMBL:BC034005 EMBL:DA237746 EMBL:AB029009
IPI:IPI00238277 IPI:IPI00923476 RefSeq:NP_001139112.1
RefSeq:NP_055989.1 UniGene:Hs.65750 ProteinModelPortal:Q9UPR6
SMR:Q9UPR6 PhosphoSite:Q9UPR6 DMDM:296453074 PaxDb:Q9UPR6
PRIDE:Q9UPR6 Ensembl:ENST00000262961 Ensembl:ENST00000439086
GeneID:23217 KEGG:hsa:23217 UCSC:uc002lyw.2 UCSC:uc010xhy.2
CTD:23217 GeneCards:GC19M003804 H-InvDB:HIX0202695 HGNC:HGNC:29189
HPA:HPA043390 neXtProt:NX_Q9UPR6 PharmGKB:PA162409746
eggNOG:NOG292385 HOGENOM:HOG000232147 HOVERGEN:HBG108765
InParanoid:Q9UPR6 OMA:QDPCERD OrthoDB:EOG4HX511 GenomeRNAi:23217
NextBio:44787 ArrayExpress:Q9UPR6 Bgee:Q9UPR6 CleanEx:HS_ZFR2
Genevestigator:Q9UPR6 Uniprot:Q9UPR6
Length = 939
Score = 226 (84.6 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 57/138 (41%), Positives = 75/138 (54%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A Q CV++IR+LR L + W + WA+ELLVEK ++SA PL PGDA+RRV E
Sbjct: 780 ARASGLQPCVIVIRVLRDLCRRVPTWGALPAWAMELLVEKAVSSAAGPLGPGDAVRRVLE 839
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVTI--------------HKLLGME 123
VA DPCE++ DAL M Q+REDVT HK+LGM+
Sbjct: 840 CVATGTLLTDGPGLQDPCERDQTDALEPMTLQEREDVTASAQHALRMLAFRQTHKVLGMD 899
Query: 124 QLKLKRGFGGSRSANRKR 141
L + G +R R+R
Sbjct: 900 LLPPRHRLG-ARFRKRQR 916
>RGD|620673 [details] [associations]
symbol:Strbp "spermatid perinuclear RNA binding protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISO] [GO:0003727 "single-stranded RNA binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006928 "cellular component movement"
evidence=ISO] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISO] [GO:0007638
"mechanosensory behavior" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 RGD:620673 GO:GO:0007275
GO:GO:0005737 GO:GO:0030154 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0007283 GO:GO:0003725 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 HOVERGEN:HBG069915 HOGENOM:HOG000232164
eggNOG:NOG269067 HSSP:P51400 EMBL:AF226864 IPI:IPI00327397
UniGene:Rn.98476 ProteinModelPortal:Q9JKU6 SMR:Q9JKU6 STRING:Q9JKU6
PhosphoSite:Q9JKU6 PRIDE:Q9JKU6 UCSC:RGD:620673 InParanoid:Q9JKU6
ArrayExpress:Q9JKU6 Genevestigator:Q9JKU6 Uniprot:Q9JKU6
Length = 671
Score = 190 (71.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 210 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGXGEALRRVME 269
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE++P DAL+ M Q +ED+T
Sbjct: 270 CLASGILLPGGPGLHDPCERDPTDALSYMTTQQKEDIT 307
Score = 38 (18.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 124 QLKLKRGFGGSRSANRKRRR 143
Q L++ F G +AN K+++
Sbjct: 567 QRTLEKLFSGPNAANNKKKK 586
>UNIPROTKB|Q9JKU6 [details] [associations]
symbol:Strbp "Spermatid perinuclear RNA-binding protein"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 RGD:620673
GO:GO:0007275 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
Gene3D:3.30.160.20 GO:GO:0007283 GO:GO:0003725 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 HOVERGEN:HBG069915 HOGENOM:HOG000232164
eggNOG:NOG269067 HSSP:P51400 EMBL:AF226864 IPI:IPI00327397
UniGene:Rn.98476 ProteinModelPortal:Q9JKU6 SMR:Q9JKU6 STRING:Q9JKU6
PhosphoSite:Q9JKU6 PRIDE:Q9JKU6 UCSC:RGD:620673 InParanoid:Q9JKU6
ArrayExpress:Q9JKU6 Genevestigator:Q9JKU6 Uniprot:Q9JKU6
Length = 671
Score = 190 (71.9 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 210 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGXGEALRRVME 269
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE++P DAL+ M Q +ED+T
Sbjct: 270 CLASGILLPGGPGLHDPCERDPTDALSYMTTQQKEDIT 307
Score = 38 (18.4 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 124 QLKLKRGFGGSRSANRKRRR 143
Q L++ F G +AN K+++
Sbjct: 567 QRTLEKLFSGPNAANNKKKK 586
>MGI|MGI:104626 [details] [associations]
symbol:Strbp "spermatid perinuclear RNA binding protein"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IDA] [GO:0003727
"single-stranded RNA binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006928
"cellular component movement" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IMP] [GO:0007638 "mechanosensory behavior" evidence=IMP]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
MGI:MGI:104626 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0015630 GO:GO:0007286 GO:GO:0003727 Gene3D:3.30.160.20
GO:GO:0006928 GO:GO:0003725 GO:GO:0007638
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 HOVERGEN:HBG069915 HOGENOM:HOG000232164 CTD:55342
eggNOG:NOG269067 KO:K13200 OMA:TDKEGAG OrthoDB:EOG4XGZZN
HSSP:P51400 EMBL:X84692 EMBL:BC014710 IPI:IPI00128254
IPI:IPI00475177 PIR:A57284 RefSeq:NP_033287.2 UniGene:Mm.237095
UniGene:Mm.477856 ProteinModelPortal:Q91WM1 SMR:Q91WM1
STRING:Q91WM1 PhosphoSite:Q91WM1 PaxDb:Q91WM1 PRIDE:Q91WM1
Ensembl:ENSMUST00000028279 Ensembl:ENSMUST00000072186 GeneID:20744
KEGG:mmu:20744 InParanoid:Q91WM1 NextBio:299395 Bgee:Q91WM1
CleanEx:MM_STRBP Genevestigator:Q91WM1 Uniprot:Q91WM1
Length = 672
Score = 191 (72.3 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 210 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVME 269
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE++P DAL+ M Q +ED+T
Sbjct: 270 CLASGILLPGGPGLHDPCERDPTDALSYMTTQQKEDIT 307
Score = 36 (17.7 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 127 LKRGFGGSRSANRKRRR 143
L++ F G +AN K+++
Sbjct: 571 LEKLFSGPNAANNKKKK 587
Score = 34 (17.0 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 114 VTIHKLLGMEQLK--LKRGFGGSRSANRKRRRD 144
VT + G LK + G G + N+K +R+
Sbjct: 344 VTDKEGAGSSALKRPFEDGLGDDKDPNKKMKRN 376
>UNIPROTKB|Q08E27 [details] [associations]
symbol:STRBP "Spermatid perinuclear RNA-binding protein"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0007638
"mechanosensory behavior" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0006928 "cellular component
movement" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003727 "single-stranded RNA binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0015630 GO:GO:0007286
GO:GO:0003677 GO:GO:0003727 Gene3D:3.30.160.20 GO:GO:0006928
GO:GO:0003725 GO:GO:0007638 GeneTree:ENSGT00550000074528
InterPro:IPR006561 Pfam:PF07528 SMART:SM00572 HOVERGEN:HBG069915
HOGENOM:HOG000232164 EMBL:BC123453 IPI:IPI00704350
RefSeq:NP_001069207.1 UniGene:Bt.44426 ProteinModelPortal:Q08E27
SMR:Q08E27 STRING:Q08E27 PRIDE:Q08E27 Ensembl:ENSBTAT00000029226
GeneID:516282 KEGG:bta:516282 CTD:55342 eggNOG:NOG269067
InParanoid:Q08E27 KO:K13200 OMA:TDKEGAG OrthoDB:EOG4XGZZN
NextBio:20872177 ArrayExpress:Q08E27 Uniprot:Q08E27
Length = 672
Score = 190 (71.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 210 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVME 269
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE++P DAL+ M Q +ED+T
Sbjct: 270 CLASGILLPGGPGLHDPCERDPTDALSYMTIQQKEDIT 307
Score = 36 (17.7 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 127 LKRGFGGSRSANRKRRR 143
L++ F G +AN K+++
Sbjct: 571 LEKLFSGPNAANNKKKK 587
Score = 34 (17.0 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 114 VTIHKLLGMEQLK--LKRGFGGSRSANRKRRRD 144
VT + G LK + G G + N+K +R+
Sbjct: 344 VTDKEGAGSSALKRPFEDGLGDDKDPNKKMKRN 376
>UNIPROTKB|E2RC52 [details] [associations]
symbol:STRBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0007638 "mechanosensory behavior" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0006928
"cellular component movement" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005634 GO:GO:0015630
GO:GO:0007286 GO:GO:0003727 Gene3D:3.30.160.20 GO:GO:0006928
GO:GO:0003725 GO:GO:0007638 GeneTree:ENSGT00550000074528
InterPro:IPR006561 Pfam:PF07528 SMART:SM00572 CTD:55342 KO:K13200
OMA:TDKEGAG EMBL:AAEX03006904 EMBL:AAEX03006905
RefSeq:XP_003435389.1 Ensembl:ENSCAFT00000032233 GeneID:480733
KEGG:cfa:480733 Uniprot:E2RC52
Length = 672
Score = 190 (71.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 210 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVME 269
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE++P DAL+ M Q +ED+T
Sbjct: 270 CLASGILLPGGPGLHDPCERDPTDALSYMTIQQKEDIT 307
Score = 36 (17.7 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 127 LKRGFGGSRSANRKRRR 143
L++ F G +AN K+++
Sbjct: 571 LEKLFSGPNAANNKKKK 587
Score = 34 (17.0 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 114 VTIHKLLGMEQLK--LKRGFGGSRSANRKRRRD 144
VT + G LK + G G + N+K +R+
Sbjct: 344 VTDKEGAGSSALKRPFEDGLGDDKDPNKKMKRN 376
>UNIPROTKB|Q96SI9 [details] [associations]
symbol:STRBP "Spermatid perinuclear RNA-binding protein"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003727
"single-stranded RNA binding" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0007638 "mechanosensory behavior"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0015630 GO:GO:0007286 GO:GO:0003677
GO:GO:0003727 Gene3D:3.30.160.20 GO:GO:0006928 GO:GO:0003725
GO:GO:0007638 InterPro:IPR006561 Pfam:PF07528 SMART:SM00572
HOVERGEN:HBG069915 EMBL:AL365338 CTD:55342 eggNOG:NOG269067
KO:K13200 OMA:TDKEGAG OrthoDB:EOG4XGZZN EMBL:AF333337 EMBL:AL136866
EMBL:AK002169 EMBL:AK024285 EMBL:AK027890 EMBL:BC002693
EMBL:BC017732 EMBL:BC108731 IPI:IPI00169430 IPI:IPI00413860
RefSeq:NP_001164608.1 RefSeq:NP_060857.2 UniGene:Hs.287659
UniGene:Hs.694157 PDB:2DMY PDBsum:2DMY ProteinModelPortal:Q96SI9
SMR:Q96SI9 IntAct:Q96SI9 MINT:MINT-1434039 STRING:Q96SI9
PhosphoSite:Q96SI9 DMDM:74752134 PaxDb:Q96SI9 PRIDE:Q96SI9
DNASU:55342 Ensembl:ENST00000348403 Ensembl:ENST00000360998
Ensembl:ENST00000447404 GeneID:55342 KEGG:hsa:55342 UCSC:uc004bns.3
GeneCards:GC09M125871 HGNC:HGNC:16462 HPA:HPA020651 MIM:611138
neXtProt:NX_Q96SI9 PharmGKB:PA38145 InParanoid:Q96SI9
PhylomeDB:Q96SI9 ChiTaRS:STRBP EvolutionaryTrace:Q96SI9
GenomeRNAi:55342 NextBio:59667 ArrayExpress:Q96SI9 Bgee:Q96SI9
CleanEx:HS_STRBP Genevestigator:Q96SI9 Uniprot:Q96SI9
Length = 672
Score = 190 (71.9 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 210 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVME 269
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE++P DAL+ M Q +ED+T
Sbjct: 270 CLASGILLPGGPGLHDPCERDPTDALSYMTIQQKEDIT 307
Score = 36 (17.7 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 127 LKRGFGGSRSANRKRRR 143
L++ F G +AN K+++
Sbjct: 571 LEKLFSGPNAANNKKKK 587
Score = 34 (17.0 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 114 VTIHKLLGMEQLK--LKRGFGGSRSANRKRRRD 144
VT + G LK + G G + N+K +R+
Sbjct: 344 VTDKEGAGSSALKRPFEDGLGDDKDPNKKMKRN 376
>UNIPROTKB|E1BTT5 [details] [associations]
symbol:STRBP "Spermatid perinuclear RNA-binding protein"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006928
"cellular component movement" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0007638 "mechanosensory behavior"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IEA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 GO:GO:0005634 GO:GO:0015630 GO:GO:0003727
Gene3D:3.30.160.20 GO:GO:0006928 GO:GO:0003725
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 OMA:TDKEGAG EMBL:AADN02026352 IPI:IPI00679421
Ensembl:ENSGALT00000034915 ArrayExpress:E1BTT5 Uniprot:E1BTT5
Length = 672
Score = 189 (71.6 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 210 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVME 269
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE+EP DAL++M Q +E +T
Sbjct: 270 CLASGILLPGGPGLHDPCEREPTDALSDMTVQQKEAIT 307
Score = 36 (17.7 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 127 LKRGFGGSRSANRKRRR 143
L++ F G +AN K+++
Sbjct: 571 LEKLFSGPNAANNKKKK 587
>UNIPROTKB|Q5ZIL4 [details] [associations]
symbol:STRBP "Spermatid perinuclear RNA-binding protein"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0007275 GO:GO:0005737
GO:GO:0030154 GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0007283
GO:GO:0003725 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 HOVERGEN:HBG069915 HOGENOM:HOG000232164
CTD:55342 eggNOG:NOG269067 KO:K13200 EMBL:AJ720770 IPI:IPI00603321
RefSeq:NP_001025851.1 UniGene:Gga.22384 HSSP:P51400
ProteinModelPortal:Q5ZIL4 SMR:Q5ZIL4 Ensembl:ENSGALT00000001802
GeneID:417105 KEGG:gga:417105 NextBio:20820461 ArrayExpress:Q5ZIL4
Uniprot:Q5ZIL4
Length = 672
Score = 189 (71.6 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 209 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVME 268
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE+EP DAL++M Q +E +T
Sbjct: 269 CLASGILLPGGPGLHDPCEREPTDALSDMTVQQKEAIT 306
Score = 36 (17.7 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 127 LKRGFGGSRSANRKRRR 143
L++ F G +AN K+++
Sbjct: 570 LEKLFSGPNAANNKKKK 586
>UNIPROTKB|F6XZ19 [details] [associations]
symbol:ZFR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 OMA:EDAKMAT Ensembl:ENSCAFT00000029995
EMBL:AAEX03003187 EMBL:AAEX03003188 EMBL:AAEX03003189
Uniprot:F6XZ19
Length = 1076
Score = 203 (76.5 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 57/143 (39%), Positives = 75/143 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 916 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 975
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ CEK P + + Q + + IHK+LGM+
Sbjct: 976 CISSGIILKGKFCFICNCEKYPLPEVLTLTPQKKFSIAPTLQFALRLLAFRQIHKVLGMD 1035
Query: 124 QL-KLKRGFGGSRSANRKRRRDT 145
L ++ + F NRKRRRD+
Sbjct: 1036 PLPQMSQRFNIHN--NRKRRRDS 1056
>UNIPROTKB|K7GM70 [details] [associations]
symbol:ILF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
EMBL:CU993813 Ensembl:ENSSSCT00000033695
GeneTree:ENSGT00550000074528 Gene3D:3.30.160.20 InterPro:IPR001159
InterPro:IPR014720 InterPro:IPR006561 Pfam:PF00035 Pfam:PF07528
SMART:SM00358 SMART:SM00572 PROSITE:PS50137 Uniprot:K7GM70
Length = 687
Score = 199 (75.1 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|K7GL83 [details] [associations]
symbol:ILF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 Gene3D:3.30.160.20 EMBL:CU993813
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 RefSeq:XP_003123290.2 Ensembl:ENSSSCT00000034746
GeneID:100515360 Uniprot:K7GL83
Length = 703
Score = 199 (75.1 bits), Expect = 7.8e-15, P = 7.8e-15
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|F1S585 [details] [associations]
symbol:ILF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
EMBL:CU993813 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 OMA:GRNADHS Ensembl:ENSSSCT00000014893
Uniprot:F1S585
Length = 728
Score = 199 (75.1 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 93 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 152
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 153 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 212
Query: 124 QLKLK 128
L K
Sbjct: 213 PLPSK 217
>UNIPROTKB|K7GP99 [details] [associations]
symbol:ILF3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003725 "double-stranded RNA binding" evidence=IEA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 Gene3D:3.30.160.20 EMBL:CU993813
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 Ensembl:ENSSSCT00000033206 Uniprot:K7GP99
Length = 804
Score = 199 (75.1 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|Q6GL57 [details] [associations]
symbol:ilf3 "Interleukin enhancer-binding factor 3"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003725
"double-stranded RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISS] [GO:0048027 "mRNA 5'-UTR binding" evidence=ISS]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 Gene3D:3.30.160.20 GO:GO:0006357 GO:GO:0006351
GO:GO:0044212 GO:GO:0048027 GO:GO:0030529 GO:GO:0003725
InterPro:IPR006561 Pfam:PF07528 SMART:SM00572 HOVERGEN:HBG069915
KO:K13090 CTD:3609 EMBL:BC074653 RefSeq:NP_001005648.1
UniGene:Str.47669 ProteinModelPortal:Q6GL57 SMR:Q6GL57 PRIDE:Q6GL57
GeneID:448121 KEGG:xtr:448121 Xenbase:XB-GENE-494367 Uniprot:Q6GL57
Length = 698
Score = 198 (74.8 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWEPLRGWPLELLCEKAIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEKE DAL ++ Q RED+T +HK+LGM+
Sbjct: 278 CLSSGILMPDGPGLYDPCEKEASDALEHLERQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPTK 342
>UNIPROTKB|Q12906 [details] [associations]
symbol:ILF3 "Interleukin enhancer-binding factor 3"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0003723 "RNA binding" evidence=NAS]
[GO:0000279 "M phase" evidence=NAS] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 GO:GO:0005739 GO:GO:0005634 GO:GO:0045892
GO:GO:0045893 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0006351 GO:GO:0030529 GO:GO:0003725 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 HOVERGEN:HBG069915 KO:K13090
eggNOG:NOG307678 EMBL:U10324 EMBL:AF147209 EMBL:AF141870
EMBL:AJ271741 EMBL:AJ271744 EMBL:AJ271745 EMBL:AJ271746
EMBL:AJ271747 EMBL:AF167569 EMBL:AF167570 EMBL:AF320244
EMBL:AF320228 EMBL:AF320229 EMBL:AF320230 EMBL:AF320231
EMBL:AF320232 EMBL:AF320233 EMBL:AF320234 EMBL:AF320235
EMBL:AF320236 EMBL:AF320237 EMBL:AF320238 EMBL:AF320239
EMBL:AF320240 EMBL:AF320241 EMBL:AF320242 EMBL:AF320243
EMBL:AF320247 EMBL:AF320245 EMBL:AF320246 EMBL:AK291617
EMBL:BC048314 EMBL:BC064836 EMBL:X98264 EMBL:X98265 EMBL:AF202445
EMBL:AF007140 IPI:IPI00219330 IPI:IPI00298788 IPI:IPI00298789
IPI:IPI00414335 IPI:IPI00556173 IPI:IPI01018179 PIR:B54857
RefSeq:NP_001131145.1 RefSeq:NP_004507.2 RefSeq:NP_036350.2
RefSeq:NP_060090.2 RefSeq:NP_703194.1 UniGene:Hs.465885 PDB:2L33
PDB:3P1X PDBsum:2L33 PDBsum:3P1X ProteinModelPortal:Q12906
SMR:Q12906 DIP:DIP-29853N IntAct:Q12906 MINT:MINT-4999319
STRING:Q12906 PhosphoSite:Q12906 DMDM:62512150 SWISS-2DPAGE:Q12906
PaxDb:Q12906 PRIDE:Q12906 DNASU:3609 Ensembl:ENST00000250241
Ensembl:ENST00000318511 Ensembl:ENST00000407004
Ensembl:ENST00000420083 GeneID:3609 KEGG:hsa:3609 UCSC:uc002mpk.2
UCSC:uc002mpl.2 UCSC:uc002mpm.2 UCSC:uc002mpn.3 UCSC:uc002mpp.3
CTD:3609 GeneCards:GC19P010764 H-InvDB:HIX0014753 HGNC:HGNC:6038
HPA:HPA001897 MIM:603182 neXtProt:NX_Q12906 PharmGKB:PA29853
InParanoid:Q12906 PhylomeDB:Q12906 ChiTaRS:ILF3
EvolutionaryTrace:Q12906 GenomeRNAi:3609 NextBio:14109
PMAP-CutDB:Q12906 ArrayExpress:Q12906 Bgee:Q12906
Genevestigator:Q12906 GermOnline:ENSG00000129351 GO:GO:0000279
Uniprot:Q12906
Length = 894
Score = 199 (75.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|F1PGB6 [details] [associations]
symbol:ILF3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 OMA:GRNADHS EMBL:AAEX03012417
Ensembl:ENSCAFT00000028077 Uniprot:F1PGB6
Length = 896
Score = 199 (75.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>RGD|619734 [details] [associations]
symbol:Ilf3 "interleukin enhancer binding factor 3" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006479 "protein methylation"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=ISO;ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 RGD:619734
GO:GO:0005737 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003700 GO:GO:0006351 GO:GO:0030529 GO:GO:0003725
GO:GO:0006479 InterPro:IPR006561 Pfam:PF07528 SMART:SM00572
HOVERGEN:HBG069915 KO:K13090 eggNOG:NOG307678 HOGENOM:HOG000232164
OrthoDB:EOG46WZ80 CTD:3609 EMBL:AF220102 EMBL:AABR03063190
EMBL:AABR03065470 IPI:IPI00200674 IPI:IPI00555218
RefSeq:NP_445864.1 UniGene:Rn.203881 ProteinModelPortal:Q9JIL3
SMR:Q9JIL3 IntAct:Q9JIL3 STRING:Q9JIL3 PhosphoSite:Q9JIL3
PRIDE:Q9JIL3 GeneID:84472 KEGG:rno:84472 UCSC:RGD:619734
InParanoid:Q9JIL3 NextBio:616960 ArrayExpress:Q9JIL3
Genevestigator:Q9JIL3 GermOnline:ENSRNOG00000022741 Uniprot:Q9JIL3
Length = 897
Score = 199 (75.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|Q9JIL3 [details] [associations]
symbol:Ilf3 "Interleukin enhancer-binding factor 3"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 RGD:619734
GO:GO:0005737 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003700 GO:GO:0006351 GO:GO:0030529 GO:GO:0003725
GO:GO:0006479 InterPro:IPR006561 Pfam:PF07528 SMART:SM00572
HOVERGEN:HBG069915 KO:K13090 eggNOG:NOG307678 HOGENOM:HOG000232164
OrthoDB:EOG46WZ80 CTD:3609 EMBL:AF220102 EMBL:AABR03063190
EMBL:AABR03065470 IPI:IPI00200674 IPI:IPI00555218
RefSeq:NP_445864.1 UniGene:Rn.203881 ProteinModelPortal:Q9JIL3
SMR:Q9JIL3 IntAct:Q9JIL3 STRING:Q9JIL3 PhosphoSite:Q9JIL3
PRIDE:Q9JIL3 GeneID:84472 KEGG:rno:84472 UCSC:RGD:619734
InParanoid:Q9JIL3 NextBio:616960 ArrayExpress:Q9JIL3
Genevestigator:Q9JIL3 GermOnline:ENSRNOG00000022741 Uniprot:Q9JIL3
Length = 897
Score = 199 (75.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|G5E9M5 [details] [associations]
symbol:ILF3 "Interleukin enhancer-binding factor 3"
species:9606 "Homo sapiens" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
GO:GO:0005739 GO:GO:0005634 Gene3D:3.30.160.20 GO:GO:0003725
EMBL:CH471106 EMBL:AC011475 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 KO:K13090 RefSeq:NP_060090.2 UniGene:Hs.465885
GeneID:3609 KEGG:hsa:3609 CTD:3609 HGNC:HGNC:6038 ChiTaRS:ILF3
GenomeRNAi:3609 NextBio:14109 OMA:GRNADHS ProteinModelPortal:G5E9M5
SMR:G5E9M5 PRIDE:G5E9M5 Ensembl:ENST00000449870
Ensembl:ENST00000588657 ArrayExpress:G5E9M5 Bgee:G5E9M5
Uniprot:G5E9M5
Length = 898
Score = 199 (75.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>MGI|MGI:1339973 [details] [associations]
symbol:Ilf3 "interleukin enhancer binding factor 3"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006479 "protein methylation" evidence=ISA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 MGI:MGI:1339973 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0006355 GO:GO:0003677
Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0030529 GO:GO:0003725
GO:GO:0006479 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 PDB:4AT7 PDB:4AT8 PDB:4AT9 PDB:4ATB
PDBsum:4AT7 PDBsum:4AT8 PDBsum:4AT9 PDBsum:4ATB HOVERGEN:HBG069915
KO:K13090 eggNOG:NOG307678 HOGENOM:HOG000232164 OrthoDB:EOG46WZ80
CTD:3609 EMBL:AF506968 EMBL:AF098967 EMBL:AF497751 EMBL:AF497752
EMBL:AK048096 EMBL:AK077560 EMBL:AK088604 EMBL:BC047272
IPI:IPI00130591 IPI:IPI00403996 IPI:IPI00555078
RefSeq:NP_001036172.1 RefSeq:NP_001036173.1 RefSeq:NP_034691.2
UniGene:Mm.440026 ProteinModelPortal:Q9Z1X4 SMR:Q9Z1X4
IntAct:Q9Z1X4 STRING:Q9Z1X4 PhosphoSite:Q9Z1X4 PaxDb:Q9Z1X4
PRIDE:Q9Z1X4 Ensembl:ENSMUST00000067646 GeneID:16201 KEGG:mmu:16201
UCSC:uc009old.1 UCSC:uc009ole.1 InParanoid:Q9Z1X4 OMA:GRNADHS
NextBio:289137 Bgee:Q9Z1X4 CleanEx:MM_ILF3 Genevestigator:Q9Z1X4
GermOnline:ENSMUSG00000032178 Uniprot:Q9Z1X4
Length = 898
Score = 199 (75.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 278 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|F1LRU1 [details] [associations]
symbol:Ilf3 "Interleukin enhancer-binding factor 3"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
RGD:619734 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 IPI:IPI00200674 Ensembl:ENSRNOT00000009354
ArrayExpress:F1LRU1 Uniprot:F1LRU1
Length = 909
Score = 199 (75.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 230 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 289
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 290 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 349
Query: 124 QLKLK 128
L K
Sbjct: 350 PLPSK 354
>UNIPROTKB|F1LNJ4 [details] [associations]
symbol:Ilf3 "Interleukin enhancer-binding factor 3"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 RGD:619734
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 IPI:IPI00948284
Ensembl:ENSRNOT00000064993 ArrayExpress:F1LNJ4 Uniprot:F1LNJ4
Length = 915
Score = 199 (75.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 49/125 (39%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 236 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 295
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA+ ++ Q RED+T +HK+LGM+
Sbjct: 296 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREDITQSAQHALRLAAFGQLHKVLGMD 355
Query: 124 QLKLK 128
L K
Sbjct: 356 PLPSK 360
>ZFIN|ZDB-GENE-030131-587 [details] [associations]
symbol:ilf3b "interleukin enhancer binding factor
3b" species:7955 "Danio rerio" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
ZFIN:ZDB-GENE-030131-587 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0003725 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 HOVERGEN:HBG069915 KO:K13090
EMBL:BC047175 EMBL:BC067172 IPI:IPI00489821 RefSeq:NP_997764.1
UniGene:Dr.76843 ProteinModelPortal:Q6NXA4 SMR:Q6NXA4 PRIDE:Q6NXA4
GeneID:321868 KEGG:dre:321868 CTD:321868 eggNOG:NOG307678
HOGENOM:HOG000232164 InParanoid:Q6NXA4 OrthoDB:EOG46WZ80
NextBio:20807563 ArrayExpress:Q6NXA4 Uniprot:Q6NXA4
Length = 833
Score = 198 (74.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 48/125 (38%), Positives = 67/125 (53%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W+ + W LELL EK I + P+ G+ALRRV E
Sbjct: 220 ARANGLRSCVIVIRILRDLCARVPTWSPLRGWPLELLCEKAIGTGNRPMGAGEALRRVLE 279
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
+A DPCEKE DA++++ Q RED+T +HK+LGM+
Sbjct: 280 CLASGILMADGSGICDPCEKELTDAISHVDRQQREDITQSAQHALRLSAFGQLHKVLGMD 339
Query: 124 QLKLK 128
L K
Sbjct: 340 PLPSK 344
>RGD|1304737 [details] [associations]
symbol:Zfr2 "zinc finger RNA binding protein 2" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006955 "immune response" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] InterPro:IPR006116
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50152 SMART:SM00355 RGD:1304737 GO:GO:0005524
GO:GO:0006955 GO:GO:0016740 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR006561 Pfam:PF07528 SMART:SM00572
IPI:IPI00369459 Ensembl:ENSRNOT00000027683 UCSC:RGD:1304737
ArrayExpress:F1LZ93 Uniprot:F1LZ93
Length = 445
Score = 191 (72.3 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 43/90 (47%), Positives = 55/90 (61%)
Query: 26 QQSCVMIIRLLRHLGQAWNLINPWALELLVEKVIASAGLPLSPGDALRRVFEAVAXXXXX 85
++ C+ + LRH W ++ A+ELLVEKV++SA PLSPGDA+RRV E VA
Sbjct: 355 RERCLETLAALRHA--KWFQVSS-AMELLVEKVLSSAPRPLSPGDAMRRVLEYVATGALL 411
Query: 86 XXXXXXXDPCEKEPRDALANMPAQDREDVT 115
DPCEK P+DAL M Q RED+T
Sbjct: 412 TDGPGLQDPCEKGPQDALEPMTPQQREDLT 441
>UNIPROTKB|Q91550 [details] [associations]
symbol:ilf3-a "Interleukin enhancer-binding factor 3-A"
species:8355 "Xenopus laevis" [GO:0003725 "double-stranded RNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
Gene3D:3.30.160.20 GO:GO:0006357 GO:GO:0006351 GO:GO:0044212
GO:GO:0048027 GO:GO:0030529 GO:GO:0003725 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 EMBL:U07155 EMBL:AY008299 PIR:I51652
UniGene:Xl.3647 IntAct:Q91550 Xenbase:XB-GENE-494371
HOVERGEN:HBG069915 Uniprot:Q91550
Length = 897
Score = 196 (74.1 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 48/125 (38%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWEPLRGWPLELLCEKAIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+ DAL ++ Q RED+T +HK+LGM+
Sbjct: 278 CLSSGILMPDGSGLYDPCEKDASDALEHLERQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|Q2TAV5 [details] [associations]
symbol:ilf3 "CBTF122 protein" species:8355 "Xenopus laevis"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003725
"double-stranded RNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005634
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0006357 GO:GO:0044212
GO:GO:0003725 InterPro:IPR006561 Pfam:PF07528 SMART:SM00572
UniGene:Xl.3647 Xenbase:XB-GENE-494371 HOVERGEN:HBG069915 KO:K13090
EMBL:BC110711 RefSeq:NP_001083930.1 ProteinModelPortal:Q2TAV5
SMR:Q2TAV5 GeneID:399197 KEGG:xla:399197 CTD:399197 Uniprot:Q2TAV5
Length = 902
Score = 196 (74.1 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 48/125 (38%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWEPLRGWPLELLCEKAIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+ DAL ++ Q RED+T +HK+LGM+
Sbjct: 278 CLSSGILMPDGSGLYDPCEKDASDALEHLERQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPSK 342
>UNIPROTKB|Q6DD04 [details] [associations]
symbol:ilf3-b "Interleukin enhancer-binding factor 3-B"
species:8355 "Xenopus laevis" [GO:0003725 "double-stranded RNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005844 "polysome"
evidence=IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISS] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
Gene3D:3.30.160.20 GO:GO:0006357 GO:GO:0006351 GO:GO:0044212
GO:GO:0048027 GO:GO:0003725 GO:GO:0005844 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 HOVERGEN:HBG069915 EMBL:BC077828
EMBL:U07156 PIR:I51653 RefSeq:NP_001180330.1 UniGene:Xl.1112
GeneID:398578 KEGG:xla:398578 CTD:398578 Xenbase:XB-GENE-6256032
KO:K13090 Uniprot:Q6DD04
Length = 898
Score = 195 (73.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 48/125 (38%), Positives = 66/125 (52%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 218 ARANGLKSCVIVIRVLRDLCTRVPTWEPLRGWPLELLCEKAIGTANRPMGAGEALRRVLE 277
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGME 123
++ DPCEK+ DAL ++ Q RED+T +HK+LGM+
Sbjct: 278 CLSSGILMPDGPGLYDPCEKDASDALEHLERQQREDITQSAQHALRLAAFGQLHKVLGMD 337
Query: 124 QLKLK 128
L K
Sbjct: 338 PLPTK 342
>ZFIN|ZDB-GENE-030729-18 [details] [associations]
symbol:strbp "spermatid perinuclear RNA binding
protein" species:7955 "Danio rerio" [GO:0003725 "double-stranded
RNA binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
ZFIN:ZDB-GENE-030729-18 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 CTD:55342 KO:K13200 EMBL:AL954183
EMBL:BX248503 IPI:IPI00998037 RefSeq:XP_707047.3 UniGene:Dr.134389
UniGene:Dr.155603 UniGene:Dr.155744 UniGene:Dr.78802
Ensembl:ENSDART00000129151 Ensembl:ENSDART00000130734 GeneID:557957
KEGG:dre:557957 NextBio:20882243 Uniprot:F1QB35
Length = 690
Score = 189 (71.6 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 39/98 (39%), Positives = 56/98 (57%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+ +SCV+++R+LRH+ AW + W LEL+ EK IA+ PL G+ALRRV E
Sbjct: 226 ARVNGLKSCVIVLRILRHMCNRVPAWEPLKGWPLELICEKAIATCNRPLGAGEALRRVME 285
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCEKEP + L+ M ++ E +T
Sbjct: 286 CLASGILLPGGPGLHDPCEKEPTNTLSAMTDEEAEAIT 323
>UNIPROTKB|F1SKU5 [details] [associations]
symbol:STRBP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015630 "microtubule cytoskeleton" evidence=IEA]
[GO:0007638 "mechanosensory behavior" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003727 "single-stranded RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005634 GO:GO:0015630
GO:GO:0007286 GO:GO:0003727 Gene3D:3.30.160.20 GO:GO:0006928
GO:GO:0003725 GO:GO:0007638 GeneTree:ENSGT00550000074528
InterPro:IPR006561 Pfam:PF07528 SMART:SM00572 OMA:TDKEGAG
EMBL:CU469076 EMBL:CU606961 Ensembl:ENSSSCT00000006135
Uniprot:F1SKU5
Length = 675
Score = 174 (66.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 39/102 (38%), Positives = 56/102 (54%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV+++R+LR L W + W LEL+ EK I + PL G+ALRRV E
Sbjct: 210 ARANGLKSCVIVLRILRDLCNRVPTWAPLKGWPLELICEKSIGTCNRPLGAGEALRRVME 269
Query: 78 AVAXXXXXXXXXXXX----DPCEKEPRDALANMPAQDREDVT 115
+A DPCE++P DAL+ M Q +E++T
Sbjct: 270 CLASGILLPAFAKGGPGLHDPCERDPTDALSYMTIQQKEEIT 311
Score = 36 (17.7 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 127 LKRGFGGSRSANRKRRR 143
L++ F G +AN K+++
Sbjct: 574 LEKLFSGPNAANNKKKK 590
Score = 34 (17.0 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 114 VTIHKLLGMEQLK--LKRGFGGSRSANRKRRRD 144
VT + G LK + G G + N+K +R+
Sbjct: 348 VTDKEGAGSSALKRPFEDGLGDDKDPNKKMKRN 380
>UNIPROTKB|F1MMA0 [details] [associations]
symbol:ILF3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 GeneTree:ENSGT00550000074528 InterPro:IPR006561
Pfam:PF07528 SMART:SM00572 OMA:GRNADHS EMBL:DAAA02019470
IPI:IPI01002098 Ensembl:ENSBTAT00000018818 ArrayExpress:F1MMA0
Uniprot:F1MMA0
Length = 894
Score = 185 (70.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 47/122 (38%), Positives = 63/122 (51%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A +SCV++IR+LR L W + W LELL EK I +A P+ G+ALRRV E
Sbjct: 220 ARANGLKSCVIVIRVLRDLCTRVPTWGPLRGWPLELLCEKSIGTANRPMGAGEALRRVLE 279
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDV-----------TIHKLLGMEQLK 126
+A DPCEKE DA+ ++ Q RE +HK+LGM+ L
Sbjct: 280 CLASGIVMPDGSGIYDPCEKEATDAIGHLDRQQREISHRHALRLAAFGQLHKVLGMDPLP 339
Query: 127 LK 128
K
Sbjct: 340 SK 341
>ZFIN|ZDB-GENE-030131-3151 [details] [associations]
symbol:ilf3a "interleukin enhancer binding factor
3a" species:7955 "Danio rerio" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
ZFIN:ZDB-GENE-030131-3151 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR006561 Pfam:PF07528 SMART:SM00572
HOVERGEN:HBG069915 eggNOG:NOG307678 HOGENOM:HOG000232164
EMBL:BC096956 IPI:IPI00611416 RefSeq:NP_001025236.1
UniGene:Dr.159983 UniGene:Dr.78735 ProteinModelPortal:Q4V9C6
SMR:Q4V9C6 PRIDE:Q4V9C6 GeneID:324431 KEGG:dre:324431 CTD:324431
InParanoid:Q4V9C6 NextBio:20808770 ArrayExpress:Q4V9C6 Bgee:Q4V9C6
Uniprot:Q4V9C6
Length = 820
Score = 179 (68.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 38/98 (38%), Positives = 54/98 (55%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
AK +SCV++IR+LR L W + W LELL +K I+++ L PG+A RRV E
Sbjct: 294 AKVSGLESCVIVIRILRDLCSRVSTWAPLKGWTLELLCQKAISTSERMLGPGEAFRRVLE 353
Query: 78 AVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT 115
+A DPCE++ DA + +Q RED+T
Sbjct: 354 CLASGIIMEGGPGISDPCERDTTDAAVYLTSQQREDIT 391
Score = 147 (56.8 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 37/113 (32%), Positives = 56/113 (49%)
Query: 30 VMIIRLLRHLGQAWNLINPWALELLVEKVIASAGLPLSPGDALRRVFEAVAXXXXXXXXX 89
+ I+R L W + W LELL +K I+++ L PG+A RRV E +A
Sbjct: 306 IRILRDLCSRVSTWAPLKGWTLELLCQKAISTSERMLGPGEAFRRVLECLASGIIMEGGP 365
Query: 90 XXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGMEQLKLK 128
DPCE++ DA + +Q RED+T ++K+LGM++L K
Sbjct: 366 GISDPCERDTTDAAVYLTSQQREDITQSAQFALRLSAFGQLYKVLGMDRLTSK 418
>UNIPROTKB|J9NWA2 [details] [associations]
symbol:ZFR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GeneTree:ENSGT00550000074528 InterPro:IPR006561 Pfam:PF07528
SMART:SM00572 EMBL:AAEX03003187 EMBL:AAEX03003188 EMBL:AAEX03003189
Ensembl:ENSCAFT00000049882 Uniprot:J9NWA2
Length = 981
Score = 170 (64.9 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 37/63 (58%), Positives = 45/63 (71%)
Query: 21 AKAEPQQSCVMIIRLLRHLGQ---AWNLINPWALELLVEKVIASAGLPLSPGDALRRVFE 77
A+A QSCV+IIR+LR L Q W+ WA+ELLVEK I+SA P SPGDALRRVFE
Sbjct: 913 ARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASSPQSPGDALRRVFE 972
Query: 78 AVA 80
++
Sbjct: 973 CIS 975
>UNIPROTKB|F1M3L8 [details] [associations]
symbol:F1M3L8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR006561 Pfam:PF07528 SMART:SM00572
IPI:IPI00362598 Ensembl:ENSRNOT00000009322 Uniprot:F1M3L8
Length = 570
Score = 154 (59.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 44/123 (35%), Positives = 59/123 (47%)
Query: 17 LATYAKAEPQQSCVMIIRLLRHLGQAWNLINPWALELLVEKVIASAGLPLSPGDALRRVF 76
L T +A +SC ++ +LR L + W LELL EK I +A P+ G++L+RV
Sbjct: 203 LHTKVRANGLKSCDIVTCVLRDL--CTRVPTWWPLELLCEKSIGTANRPVGAGESLQRVL 260
Query: 77 EAVAXXXXXXXXXXXXDPCEKEPRDALANMPAQDREDVT--------------IHKLLGM 122
E + DPCEKE DA N+ Q RED T +HKLLGM
Sbjct: 261 ECLVSGIVIPDGSGIYDPCEKEATDANGNLDRQQREDSTQSTQHALLLAAFGQLHKLLGM 320
Query: 123 EQL 125
+ L
Sbjct: 321 DPL 323
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 176 147 0.00091 103 3 11 22 0.45 31
30 0.50 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 589 (63 KB)
Total size of DFA: 137 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.87u 0.12s 12.99t Elapsed: 00:00:01
Total cpu time: 12.88u 0.12s 13.00t Elapsed: 00:00:01
Start: Thu Aug 15 12:52:04 2013 End: Thu Aug 15 12:52:05 2013