BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2830
(183 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17478|RLA4_SCHPO 60S acidic ribosomal protein P2-beta OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp202 PE=1 SV=1
Length = 110
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 86/114 (75%), Gaps = 4/114 (3%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAYLL +GGK++P+ D+E +LS+VGIE++AE+++ ++ ELNGKN+EE+IAAG E
Sbjct: 1 MKYLAAYLLLTVGGKQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KL+++PS A A AA AA E ++A+++E ++ SD+DMGFG+++
Sbjct: 61 KLSTVPS----AGAVATPAAGGAAGAEATSAAEEAKEEEAAEESDEDMGFGLFD 110
>sp|O61463|RLA2_CRYST 60S acidic ribosomal protein P2 OS=Cryptochiton stelleri PE=3 SV=1
Length = 110
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 4/114 (3%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVAAY+LA LGG E P++ D++KIL SVGIE + ++L V+ EL GKNL+E+IA G++
Sbjct: 1 MRYVAAYMLATLGGNEKPSESDLKKILDSVGIEVEKDQLTKVINELKGKNLDEVIAEGEK 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+PS A AA A E K+ +K+E + SDDDMGFG+++
Sbjct: 61 KLASVPS----GGGVAAAAPAAGGGGADPAEAKEEKKEEPEEESDDDMGFGLFD 110
>sp|P05389|RLA2_DROME 60S acidic ribosomal protein P2 OS=Drosophila melanogaster GN=RpLP2
PE=1 SV=1
Length = 113
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 56/65 (86%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVAAYLLA LGGK++PA D+EKILSSVG+E DAE+L V+KEL GK+++++I G+E
Sbjct: 1 MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60
Query: 99 KLASM 103
KL+SM
Sbjct: 61 KLSSM 65
>sp|Q96UQ7|RLA2_RHOGU 60S acidic ribosomal protein P2 OS=Rhodotorula glutinis PE=1 SV=1
Length = 110
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 85/114 (74%), Gaps = 4/114 (3%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M++VAAYLL G +P+ DV+K+L++ I++D E+L +++KEL GK++ E+IA G +
Sbjct: 1 MKHVAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSK 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+PSGG A +A+AG AA AAEE K E+K AEK EE SDDDMGFG+++
Sbjct: 61 KLASVPSGGAAPAAAAGGAAAGGAAEE-KAEDKPAEKDEE---SDDDMGFGLFD 110
>sp|O01725|RLA2_BRAFL 60S acidic ribosomal protein P2 OS=Branchiostoma floridae PE=3 SV=1
Length = 116
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVAAYLLA LGG NP+ GD++KIL SVGI+++ E+L V+ EL GK++EE++AAG+
Sbjct: 1 MRYVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRG 60
Query: 99 KLASMPS--GGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KL+SMPS G A + GAAA A +E+K+ +K+E + SDDDMGFG+++
Sbjct: 61 KLSSMPSGGGVAAAAGGGGAAAGGGGAAPAAEEKKEEKKEESEEESDDDMGFGLFD 116
>sp|P08094|RLA2_SCHPO 60S acidic ribosomal protein P2-alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp201 PE=1 SV=1
Length = 110
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 61/69 (88%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAYLL +GGK++P+ D+E +LS+VGIE+++E+++ ++ ELNGK+++E+IAAG E
Sbjct: 1 MKYLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNE 60
Query: 99 KLASMPSGG 107
KLA++P+GG
Sbjct: 61 KLATVPTGG 69
>sp|O24415|RLA2B_MAIZE 60S acidic ribosomal protein P2B OS=Zea mays GN=RPP2B PE=1 SV=1
Length = 113
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+ +AAYLLA LGG +P DV+ IL SVG E+D EKL+ +L EL K++ E+IAAG+E
Sbjct: 1 MKVIAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
+L+S+PSGGGA+ A AA A ++ +K+ + +E+ SD+DMGF +++
Sbjct: 61 RLSSVPSGGGAIDMGAPAAVAGGGAAPAEEAKKEEKVEEKE-ESDEDMGFSLFD 113
>sp|P02401|RLA2_RAT 60S acidic ribosomal protein P2 OS=Rattus norvegicus GN=Rplp2 PE=1
SV=2
Length = 115
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVA+YLLAALGG NP+ D++KIL SVGIE+D E+L V+ ELNGKN+E++IA G
Sbjct: 1 MRYVASYLLAALGGNSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIEDVIAQGVG 60
Query: 99 KLASMP 104
KLAS+P
Sbjct: 61 KLASVP 66
>sp|O14317|RLA6_SCHPO 60S acidic ribosomal protein P2-C OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp203 PE=1 SV=2
Length = 110
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 84/114 (73%), Gaps = 4/114 (3%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAYLL +GGK +P+ D+E +LS+VGIES++E+++ ++KEL+GK+++E+IAAG E
Sbjct: 1 MKYLAAYLLLTVGGKNSPSASDIESVLSTVGIESESERVEALIKELDGKDIDELIAAGNE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLA++PS A+A AA AA EE E+ +E + SD+DMGFG+++
Sbjct: 61 KLATVPS----GGAAAAAAPAAAGGAAPAAEEAAKEEAKEEEESDEDMGFGLFD 110
>sp|P02399|RLA2_ARTSA 60S acidic ribosomal protein P2 OS=Artemia salina PE=1 SV=1
Length = 111
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVAAYLLAAL G +P+ D+EKILSSVGIE + +L+ V+ EL GK+LE +IA G+
Sbjct: 1 MRYVAAYLLAALSGNADPSTADIEKILSSVGIECNPSQLQKVMNELKGKDLEALIAEGQT 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLASMP+ + +A A A A KE KK EKKEES+ D+DMGFG+++
Sbjct: 61 KLASMPT---GGAPAAAAGGAATAPAAEAKEAKKEEKKEESEEEDEDMGFGLFD 111
>sp|P42899|RLA2_BOVIN 60S acidic ribosomal protein P2 OS=Bos taurus GN=RPLP2 PE=2 SV=1
Length = 115
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVA+YLLAALGG +P+ D++KIL SVGIE+D ++L V+ EL+GKN+E++IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELHGKNIEDVIAQGIG 60
Query: 99 KLASMP-SGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+P G AVSA+ G+AAPAA + EEKK EKKEES+ SDDDMGFG+++
Sbjct: 61 KLASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKEEKKEESEESDDDMGFGLFD 115
>sp|P99027|RLA2_MOUSE 60S acidic ribosomal protein P2 OS=Mus musculus GN=Rplp2 PE=1 SV=3
Length = 115
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVA+YLLAALGG +P+ D++KIL SVGIE+D ++L V+ ELNGKN+E++IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVG 60
Query: 99 KLASMP 104
KLAS+P
Sbjct: 61 KLASVP 66
>sp|P05387|RLA2_HUMAN 60S acidic ribosomal protein P2 OS=Homo sapiens GN=RPLP2 PE=1 SV=1
Length = 115
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVA+YLLAALGG +P+ D++KIL SVGIE+D ++L V+ ELNGKN+E++IA G
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIG 60
Query: 99 KLASMP 104
KLAS+P
Sbjct: 61 KLASVP 66
>sp|Q6X9Z5|RLA2_HORSE 60S acidic ribosomal protein P2 OS=Equus caballus GN=RPLP2 PE=3
SV=1
Length = 115
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVA+YLLAALGG +P+ D++KIL SVGIE+D ++L V+ ELNGKN+E++IA G
Sbjct: 1 MRYVASYLLAALGGNTSPSAKDIKKILDSVGIEADDDRLDKVISELNGKNIEDVIAQGIG 60
Query: 99 KLASMP 104
KLAS+P
Sbjct: 61 KLASVP 66
>sp|P90703|RLA2_BRUMA 60S acidic ribosomal protein P2 OS=Brugia malayi GN=rpp-2 PE=3 SV=1
Length = 114
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 79/118 (66%), Gaps = 7/118 (5%)
Query: 38 IMRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGK 97
+M+Y+AAYLL+ + G ++P+ D+E +L SVG++ D E V+ L+GK+++E+I AG
Sbjct: 1 MMKYLAAYLLSTMSGNKSPSAKDIEDVLGSVGLDVDMEDANKVVSALSGKSIDEVITAGL 60
Query: 98 EKLASMPSGGGAVSASAG--AAAPAAAAEEG-KKEEKKAEKKEESDASDDDMGFGVWE 152
K++S+PS AVSA A +A P A + G KK E K KEE SD+DMGFG+++
Sbjct: 61 AKVSSVPS-DAAVSAIAPVVSATPTDALQAGSKKGETKEGPKEE---SDEDMGFGLFD 114
>sp|Q9LXM8|RLA24_ARATH 60S acidic ribosomal protein P2-4 OS=Arabidopsis thaliana GN=RPP2D
PE=1 SV=1
Length = 111
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 78/114 (68%), Gaps = 3/114 (2%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+ AA+LLA LGG NP+ +++ I+ +VG + D E ++++LKE++GK++ E+IA+G+E
Sbjct: 1 MKVAAAFLLAVLGGNANPSADNIKDIIGAVGADVDGESIELLLKEVSGKDIAELIASGRE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+PSGGG + AA + EKK KKEE + SDDDMGF ++E
Sbjct: 61 KLASVPSGGG---VAVSAAPSSGGGGAAAPAEKKEAKKEEKEESDDDMGFSLFE 111
>sp|Q29315|RLA2_PIG 60S acidic ribosomal protein P2 OS=Sus scrofa GN=RPLP2 PE=3 SV=1
Length = 115
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/115 (57%), Positives = 87/115 (75%), Gaps = 1/115 (0%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRYVA+YLLAALGG +P+ D++K L SVGIE+D ++L V+ ELNGKN+E++IA G
Sbjct: 1 MRYVASYLLAALGGNTSPSAKDIKKXLDSVGIEADXDRLNKVISELNGKNIEDVIAQGIG 60
Query: 99 KLASM-PSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+ G AV+A+ G+ APAA + EEKK EKKEES+ SDDDMGFG+++
Sbjct: 61 KLASVPSGGAXAVAAAPGSXAPAAGSAPAAAEEKKEEKKEESEESDDDMGFGLFD 115
>sp|P46252|RLA2A_MAIZE 60S acidic ribosomal protein P2A OS=Zea mays GN=RPP2A PE=1 SV=3
Length = 112
Score = 80.1 bits (196), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 81/114 (71%), Gaps = 2/114 (1%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M++VAAYLLA L G +P+ D+ IL SVG E D EK++++L +L+GK++ E+IAAG+E
Sbjct: 1 MKFVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGRE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
K AS+P GGG V+ +A A A AA + ++++ +++E SDDDMGF +++
Sbjct: 61 KFASVPCGGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEE--SDDDMGFSLFD 112
>sp|Q9C3Z5|RLA2_PODAS 60S acidic ribosomal protein P2 OS=Podospora anserina PE=3 SV=1
Length = 111
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 3/114 (2%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+++AAYLL LGGK P+ DV+ +L SVGIE+D+++L ++ EL GK++ E+IA G
Sbjct: 1 MKHLAAYLLLTLGGKATPSAADVKAVLESVGIEADSDRLDKLISELEGKDVNELIAEGSS 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+PS + A AA AAAA + + K+EE + SDDDMGFG+++
Sbjct: 61 KLASVPS---GGAGGAAAAGGAAAAGGAAEAAPEEAKEEEKEESDDDMGFGLFD 111
>sp|P50879|RLA2_TAESO 60S acidic ribosomal protein P2 OS=Taenia solium PE=2 SV=1
Length = 121
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 55/77 (71%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
MRY+AAYLLA LGG P + D++ ILSSVG+E + E+ K+ + +L+GKN+ ++I GKE
Sbjct: 1 MRYLAAYLLAQLGGTGRPQESDIKNILSSVGVECEQERAKLGVDQLHGKNVRDLINTGKE 60
Query: 99 KLASMPSGGGAVSASAG 115
K++++ G V+ +G
Sbjct: 61 KMSAVSFGATPVAVPSG 77
>sp|Q9HFQ4|RLA4_CANAX 60S acidic ribosomal protein P2-B OS=Candida albicans GN=RPP2B PE=1
SV=1
Length = 111
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 79/114 (69%), Gaps = 3/114 (2%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAYLL GG +P+ D+ +L SVG+E++ +L+ +LK+L GK+L+E+IA G
Sbjct: 1 MKYLAAYLLLVQGGNTSPSASDITALLESVGVEAEESRLQALLKDLEGKDLQELIAEGNT 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+PS +A+ GA+A AA G E ++ +++E + SDDDMGFG+++
Sbjct: 61 KLASVPS---GGAAAGGASASTGAAAGGAAEAEEEKEEEAKEESDDDMGFGLFD 111
>sp|P41099|RLA2_PARAR 60S acidic ribosomal protein P2 OS=Parthenium argentatum PE=3 SV=1
Length = 114
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 54/67 (80%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+ +AA+LLA LGG +P D++ IL+SVG ++D +K++++L ++ GK++ E+IA+G+E
Sbjct: 1 MKVIAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRE 60
Query: 99 KLASMPS 105
+LAS+PS
Sbjct: 61 RLASVPS 67
>sp|P51407|RLA21_ARATH 60S acidic ribosomal protein P2-1 OS=Arabidopsis thaliana GN=RPP2A
PE=2 SV=2
Length = 115
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 15/122 (12%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+ VAA+LLA L GK +P GD++ IL SVG E++ +++++LKE+ GK+L E+IAAG+E
Sbjct: 1 MKVVAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 99 KLASMPSGGGAVSASAGAA--------APAAAAEEGKKEEKKAEKKEESDASDDDMGFGV 150
KLAS+PSGGG A A A APAA + KK EKKEE + SDDDMGF +
Sbjct: 61 KLASVPSGGGGGVAVASATSGGGGGGGAPAAES-------KKEEKKEEKEESDDDMGFSL 113
Query: 151 WE 152
+E
Sbjct: 114 FE 115
>sp|Q9LH85|RLA23_ARATH 60S acidic ribosomal protein P2-3 OS=Arabidopsis thaliana GN=RPP2C
PE=1 SV=1
Length = 115
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+ +AA+LLA LGG ENP D++KIL SVG E D K+ ++ + ++ E+IAAG+E
Sbjct: 1 MKVIAAFLLAKLGGNENPTSNDLKKILESVGAEIDETKIDLLFSLIKDHDVTELIAAGRE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMG-FGVWE 152
K++++ SGG AV+ AG AA+ E K + +E D S DD G G+++
Sbjct: 61 KMSALSSGGPAVAMVAGGGGGGAASAAEPVAESKKKVEEVKDESSDDAGMMGLFD 115
>sp|P22683|RLA2_DICDI 60S acidic ribosomal protein P2 OS=Dictyostelium discoideum
GN=rplp2 PE=1 SV=3
Length = 106
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 8/114 (7%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAYLLA+L G N A V KIL SVG+E DA +++ V KEL+GK+++ +IAAGK
Sbjct: 1 MKYLAAYLLASLSGNANAAS--VTKILQSVGVEVDAARVESVCKELDGKDVQALIAAGKS 58
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
K+ S+ +A+A AAA +AA K +E+ + SDDDMG G+++
Sbjct: 59 KVGSVA------AAAAPAAATSAAPAAAAAAPAKKVVEEKKEESDDDMGMGLFD 106
>sp|Q9GPU2|RLA2_EUPRA 60S acidic ribosomal protein P2 OS=Euplotes raikovi PE=3 SV=1
Length = 113
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAY L LGG +P+ DV+K+L SVG++S+ +KL +LK L GK L E+I AG
Sbjct: 1 MKYIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSS 60
Query: 99 KLASM 103
K++S+
Sbjct: 61 KVSSL 65
>sp|Q9SLF7|RLA22_ARATH 60S acidic ribosomal protein P2-2 OS=Arabidopsis thaliana GN=RPP2B
PE=1 SV=1
Length = 115
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 51/65 (78%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+ VAAYLLA L GK +P D++ IL SVG E++ +++++LKE+ GK+L E+IAAG+E
Sbjct: 1 MKVVAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGRE 60
Query: 99 KLASM 103
KLAS+
Sbjct: 61 KLASV 65
>sp|Q967Y9|RLA2_EIMTE 60S acidic ribosomal protein P2 OS=Eimeria tenella PE=3 SV=2
Length = 114
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+YVAAYL+ LGG E P DV ++L VG E + E LK ++ + GK E+I+AG E
Sbjct: 1 MKYVAAYLMTVLGGNEAPTAADVSRVLEPVGAEVNPEVLKTLIDAMQGKAAHEVISAGLE 60
Query: 99 KLASMPS 105
KL +P
Sbjct: 61 KLQKVPC 67
>sp|P42037|RLA2_ALTAL 60S acidic ribosomal protein P2 OS=Alternaria alternata GN=ALTA5
PE=1 SV=1
Length = 113
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 84/114 (73%), Gaps = 1/114 (0%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+++AAYLL LGG +P+ DV+ +L SVGIE+D+++L ++ EL GK++ E+IA+G E
Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+PSGG +A++G AA A + + + + A+++E+ SD+DMGFG+++
Sbjct: 61 KLASVPSGGAGGAAASGGAAAAGGSAQAEAAPEAAKEEEKE-ESDEDMGFGLFD 113
>sp|O01504|RLA2_CAEEL 60S acidic ribosomal protein P2 OS=Caenorhabditis elegans GN=rpa-2
PE=3 SV=2
Length = 107
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+ AYLLA LGG +P+ DV K+L + G++ D E V+ L GK + E+IA GK
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KL+S+P + A A AA + + ++ +K+E + SDDDMGFG+++
Sbjct: 61 KLSSVP-------SGGSAPAAAAPSGGAAPKAEEKKKEEPKEESDDDMGFGLFD 107
>sp|Q9LUK2|RLA25_ARATH 60S acidic ribosomal protein P2-5 OS=Arabidopsis thaliana GN=RPP2E
PE=3 SV=1
Length = 114
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+ VAAYLLA L G ENP+ D++KI+ SVG E D EK+ + + +++ E+IA G+E
Sbjct: 1 MKVVAAYLLAKLSGNENPSVADLKKIVESVGAEIDQEKIDLFFSLIKDRDVTELIAVGRE 60
Query: 99 KLASM 103
K+A++
Sbjct: 61 KMAAL 65
>sp|P02400|RLA4_YEAST 60S acidic ribosomal protein P2-beta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPP2B PE=1 SV=2
Length = 110
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 73/115 (63%), Gaps = 6/115 (5%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGK-NLEEIIAAGK 97
M+Y+AAYLL GG P+ D++ ++ SVG E D ++ +L L GK +LEEIIA G+
Sbjct: 1 MKYLAAYLLLVQGGNAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQ 60
Query: 98 EKLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
+K A++P+ ++ AAA AA A G ++ +++E + SDDDMGFG+++
Sbjct: 61 KKFATVPT-----GGASSAAAGAAGAAAGGDAAEEEKEEEAKEESDDDMGFGLFD 110
>sp|Q8TFM9|RLA2_FUSCU 60S acidic ribosomal protein P2 OS=Fusarium culmorum PE=1 SV=1
Length = 109
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 82/114 (71%), Gaps = 5/114 (4%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+++AAYLL LGG +P+ DV+ +L+SVGI++D ++L ++ EL GK+++++IA G E
Sbjct: 1 MKHLAAYLLLGLGGNTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQLIAEGSE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+PS + GA+ AAAA +E K+ EK+EE + SD+DMGFG+++
Sbjct: 61 KLASVPS-----GGAGGASGGAAAAGGAAEEAKEEEKEEEKEESDEDMGFGLFD 109
>sp|Q9UUZ6|RLA2_ASPFU 60S acidic ribosomal protein P2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=AFUA_2G10100 PE=1 SV=2
Length = 111
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 79/114 (69%), Gaps = 3/114 (2%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+++AAYLL AL G +P+ DV+ +LSSVGI++D E+L ++ EL GK+L+E+IA G
Sbjct: 1 MKHLAAYLLLALAGNTSPSSEDVKAVLSSVGIDADEERLNKLIAELEGKDLQELIAEGST 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLAS+PS +A+A AA AAA + +K+EE + SD+DMGFG+++
Sbjct: 61 KLASVPS---GGAAAAAPAAAGAAAGGAAAPAAEEKKEEEKEESDEDMGFGLFD 111
>sp|P42039|RLA2_DAVTA 60S acidic ribosomal protein P2 OS=Davidiella tassiana GN=CLAH5
PE=1 SV=3
Length = 111
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 53/67 (79%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AA+LL L G +P+ D++ +LSSVGI++D E+L +LKEL GK++ E+I++G E
Sbjct: 1 MKYLAAFLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSE 60
Query: 99 KLASMPS 105
KLAS+PS
Sbjct: 61 KLASVPS 67
>sp|P27055|RLA2_BABBO 60S acidic ribosomal protein P2 OS=Babesia bovis PE=3 SV=1
Length = 112
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
++YV++YLLA G ENP+ D++KIL +VG + D E L+ ++ ++GK + E IAAG
Sbjct: 3 LKYVSSYLLAVAAGNENPSVDDLKKILDAVGSDVDEECLQGLVDSMSGKTVHETIAAGMT 62
Query: 99 KLASMP 104
KL SMP
Sbjct: 63 KLQSMP 68
>sp|P51408|RLA2_TRYBB 60S acidic ribosomal protein P2 OS=Trypanosoma brucei brucei PE=3
SV=1
Length = 107
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAY L +L GK P++ DVE +L + G+ D+ +++ +L E+ GK+ + + A GK
Sbjct: 1 MKYLAAYALISLSGK-TPSKADVEAVLKAAGVPVDSSRVEELLSEVEGKDFDALCAEGKA 59
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KL G V+A A + AAA A E + DDDMGFG+++
Sbjct: 60 KLV------GGVTAGGAAPSGGAAAHAAAASAPAAAAAEAEEEDDDDMGFGLFD 107
>sp|O44010|RLA2_LEIBR 60S acidic ribosomal protein P2 OS=Leishmania braziliensis GN=LIP2
PE=1 SV=1
Length = 105
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 11/115 (9%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAY L AL GK P + DV+ +L + G+ + ++ + +EL GK+ +E++ G+
Sbjct: 1 MQYLAAYALVALSGK-TPCKADVQAVLKAAGVAIELSRVDALFQELEGKSFDELMTEGRS 59
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEES-DASDDDMGFGVWE 152
KL V + + A A AA+ KKE S + +DDDMGFG+++
Sbjct: 60 KL---------VGSGSAAPAAAASTAGAAVAAAADAKKEASEEEADDDMGFGLFD 105
>sp|P19943|RLA2_RABIT 60S acidic ribosomal protein P2 (Fragment) OS=Oryctolagus
cuniculus GN=RPLP2 PE=1 SV=1
Length = 44
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVL 81
MRYVA+YLLAALGG +P+ D++KIL SVGIE+D ++L V+
Sbjct: 1 MRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVI 43
>sp|Q06383|RLA2_LEIIN 60S acidic ribosomal protein P2-1 OS=Leishmania infantum GN=LIP
PE=2 SV=1
Length = 106
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAY L AL GK P++ DV+ +L + G+ DA ++ V +E+ GK+ + ++A G+
Sbjct: 1 MQYLAAYALVALSGK-TPSKADVQAVLKAAGVAVDASRVDAVFQEVEGKSFDALVAEGRT 59
Query: 99 KL 100
KL
Sbjct: 60 KL 61
>sp|Q06382|RLA3_LEIIN 60S acidic ribosomal protein P2-2 OS=Leishmania infantum GN=LIP'
PE=2 SV=1
Length = 111
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKEK 99
+Y+AAY LA+L K +P+Q DVE I +V I+ D L V++ + G+++ +IA G K
Sbjct: 4 KYLAAYALASLS-KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAK 62
Query: 100 LASMP 104
+++MP
Sbjct: 63 MSAMP 67
>sp|Q9HFQ5|RLA2_CANAX 60S acidic ribosomal protein P2-A OS=Candida albicans GN=RPP2A PE=1
SV=1
Length = 108
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 75/114 (65%), Gaps = 6/114 (5%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAYLL G P+ DV+ +LS+ IE + EK++ ++ E +GKN+EE+IA G E
Sbjct: 1 MKYLAAYLLLVNAGNATPSAADVKAVLSAADIEVEEEKVEKLISESDGKNVEELIAEGNE 60
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KL+S+P S + AAA A+A G + ++A ++E ++ SDDDM FG+++
Sbjct: 61 KLSSVP------SGAPAAAAGGASAAAGGEATEEAAEEEAAEESDDDMSFGLFD 108
>sp|O00806|RLA2_PLAF7 60S acidic ribosomal protein P2 OS=Plasmodium falciparum (isolate
3D7) GN=MAL3P3.19 PE=3 SV=1
Length = 112
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+YVAAYL+ LGG ENP+ +V+ +L +V + + E L + L GK+ E+I G +
Sbjct: 3 MKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLK 62
Query: 99 KLASM 103
KL ++
Sbjct: 63 KLQNI 67
>sp|O43940|RLA2_LEIDO 60S acidic ribosomal protein P2 OS=Leishmania donovani GN=ARP-1
PE=3 SV=1
Length = 105
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAY L AL GK P++ VE +L + G+ DA ++ V +EL GK+ + ++A G+
Sbjct: 1 MQYLAAYALVALSGK-TPSKAAVEAVLKAAGVAVDASRVDAVFQELEGKSFDALVAEGRA 59
Query: 99 KL 100
KL
Sbjct: 60 KL 61
>sp|Q8SRM2|RLA2_ENCCU 60S acidic ribosomal protein P2 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPP2A PE=1 SV=1
Length = 103
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M YVAAY++ GKE + E + + +G E + E +++ L +++GK+++E+++ GKE
Sbjct: 1 MEYVAAYVMFDKVGKELNERSMTE-LFNEIGAEIEPETMRLFLSKVSGKSMDEVMSKGKE 59
Query: 99 KLASMPSGGGAVSASAGA--AAPAAAAEEGKKEEKKAEKKEESD 140
+AS+ A+S+S + A PA AE + E K E+ E+ D
Sbjct: 60 LMASL-----AISSSQKSEPAQPADTAESTQATENKEEEDEDFD 98
>sp|P23632|RLA2_TRYCR 60S acidic ribosomal protein P2-A OS=Trypanosoma cruzi PE=1 SV=1
Length = 107
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAY L L G P++ VE +L + G+ D ++ + E GK+ + + GK
Sbjct: 1 MKYLAAYALVGLSGG-TPSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKS 59
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KL G V+ A A A A A + DDDMGFG+++
Sbjct: 60 KLV------GGVTRPNAATASAPTAAAAASSGAAAPAAAAEEEEDDDMGFGLFD 107
>sp|P26795|RLA3_TRYCR 60S acidic ribosomal protein P2-B OS=Trypanosoma cruzi PE=3 SV=1
Length = 112
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAY LA+L K P DVE I + GIE +++ L V++ + G+++ ++A G
Sbjct: 3 MKYLAAYALASLN-KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAA 61
Query: 99 KL 100
K+
Sbjct: 62 KM 63
>sp|P05390|RLA2_WHEAT 60S acidic ribosomal protein P2 (Fragment) OS=Triticum aestivum
PE=1 SV=1
Length = 42
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIV 80
M+ +AAYLLA LGG +P+ DV+ IL++VG E++ EKL+ +
Sbjct: 1 MKLIAAYLLAYLGGNSSPSAADVKDILNAVGAEANEEKLEFL 42
>sp|P05319|RLA2_YEAST 60S acidic ribosomal protein P2-alpha OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPP2A PE=1 SV=1
Length = 106
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 8/114 (7%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKE 98
M+Y+AAYLL G P ++ IL SVGIE + EK+ VL L GK+++E+I G E
Sbjct: 1 MKYLAAYLLLNAAGN-TPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNE 59
Query: 99 KLASMPSGGGAVSASAGAAAPAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152
KLA AV A+ A+A AAA G ++ +++E ++ SDDDMGFG+++
Sbjct: 60 KLA-------AVPAAGPASAGGAAAASGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>sp|P54048|RL12_METJA 50S ribosomal protein L12 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl12 PE=3 SV=1
Length = 102
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIA 94
M Y+ A LL GKE + ++ +LS+ G+E D ++K ++ L G ++EE IA
Sbjct: 1 MEYIYAALLLHSAGKEIT-EDAIKAVLSAAGVEVDDARVKALVAGLEGVDIEEAIA 55
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.306 0.127 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,132,735
Number of Sequences: 539616
Number of extensions: 3193036
Number of successful extensions: 20653
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 308
Number of HSP's that attempted gapping in prelim test: 18867
Number of HSP's gapped (non-prelim): 1183
length of query: 183
length of database: 191,569,459
effective HSP length: 110
effective length of query: 73
effective length of database: 132,211,699
effective search space: 9651454027
effective search space used: 9651454027
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 57 (26.6 bits)