Query psy2830
Match_columns 183
No_of_seqs 137 out of 817
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 18:01:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2830.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2830hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iz5_v 60S acidic ribosomal pr 100.0 5.2E-42 1.8E-46 265.1 5.9 113 39-152 1-113 (113)
2 3izc_v 60S acidic ribosomal pr 100.0 2.7E-39 9.4E-44 247.4 5.8 106 39-152 1-106 (106)
3 3iz5_t 60S acidic ribosomal pr 100.0 5.2E-34 1.8E-38 219.5 6.9 104 39-152 7-110 (110)
4 3izc_t 60S acidic ribosomal pr 100.0 1.4E-32 4.9E-37 210.2 6.7 101 39-152 6-106 (106)
5 2lbf_B 60S acidic ribosomal pr 99.9 3.8E-25 1.3E-29 158.3 5.7 70 38-107 1-70 (70)
6 2lbf_A 60S acidic ribosomal pr 99.8 4.9E-19 1.7E-23 126.0 6.7 54 39-94 8-61 (69)
7 3a1y_A 50S ribosomal protein P 99.7 6.4E-18 2.2E-22 116.5 8.1 56 39-95 1-56 (58)
8 2zkr_g 60S acidic ribosomal pr 98.9 2E-11 6.9E-16 107.5 -6.2 22 131-152 296-317 (317)
9 3iz5_s 60S acidic ribosomal pr 98.8 1.4E-09 4.6E-14 96.0 3.0 22 131-152 298-319 (319)
10 3u5i_q A0, L10E, 60S acidic ri 98.7 7.2E-10 2.5E-14 97.4 -1.4 22 131-152 291-312 (312)
11 3iz5_t 60S acidic ribosomal pr 93.8 0.074 2.5E-06 40.4 4.6 26 64-90 14-39 (110)
12 3izc_t 60S acidic ribosomal pr 93.5 0.12 4E-06 39.0 5.2 38 38-91 2-39 (106)
13 3j21_k Acidic ribosomal protei 89.9 0.06 2E-06 47.5 0.0 10 56-65 234-243 (339)
14 3iz5_v 60S acidic ribosomal pr 73.4 0.69 2.4E-05 35.2 0.0 15 54-68 32-46 (113)
15 1avs_A Troponin C; muscle cont 62.4 17 0.00059 23.6 5.3 55 40-94 21-80 (90)
16 2mys_C Myosin; muscle protein, 61.9 35 0.0012 23.3 7.1 54 41-94 10-70 (149)
17 2lv7_A Calcium-binding protein 59.3 23 0.00078 24.7 5.7 54 40-93 37-95 (100)
18 2kn2_A Calmodulin; S MAPK phos 58.9 22 0.00074 23.1 5.3 55 40-94 10-69 (92)
19 2kz2_A Calmodulin, CAM; TR2C, 57.8 30 0.001 23.2 6.0 55 40-94 30-89 (94)
20 3izc_v 60S acidic ribosomal pr 57.4 2.2 7.5E-05 32.0 0.0 14 55-68 32-45 (106)
21 3dtp_E RLC, myosin regulatory 55.1 62 0.0021 24.0 8.5 55 40-94 58-113 (196)
22 1j7q_A CAVP, calcium vector pr 54.8 31 0.0011 22.1 5.5 45 40-84 15-62 (86)
23 3iz5_s 60S acidic ribosomal pr 54.1 2.7 9.2E-05 36.7 0.0 28 35-66 218-245 (319)
24 1tiz_A Calmodulin-related prot 54.1 26 0.00087 20.9 4.7 42 43-84 5-46 (67)
25 3i5g_C Myosin catalytic light 54.0 25 0.00086 26.0 5.5 54 41-94 87-147 (159)
26 2joj_A Centrin protein; N-term 53.8 18 0.00061 22.5 4.0 55 40-94 8-67 (77)
27 2ktg_A Calmodulin, putative; e 52.6 18 0.0006 23.1 3.9 55 40-94 15-74 (85)
28 1wlz_A DJBP, CAP-binding prote 52.4 44 0.0015 22.1 6.1 55 40-94 25-84 (105)
29 1uhk_A Aequorin 2, aequorin; E 51.9 26 0.00088 25.2 5.1 55 43-97 113-172 (191)
30 3j21_k Acidic ribosomal protei 51.5 3.1 0.00011 36.5 0.0 12 83-94 282-293 (339)
31 4ds7_A Calmodulin, CAM; protei 51.1 37 0.0013 23.1 5.6 44 42-85 87-130 (147)
32 3u5i_q A0, L10E, 60S acidic ri 48.9 3.6 0.00012 35.8 0.0 10 56-65 230-239 (312)
33 2lhi_A Calmodulin, serine/thre 47.9 33 0.0011 25.7 5.3 55 40-94 85-143 (176)
34 1qv0_A Obelin, OBL; photoprote 47.8 22 0.00076 25.8 4.2 53 43-95 117-174 (195)
35 2lmt_A Calmodulin-related prot 47.3 42 0.0014 23.7 5.6 44 41-84 85-128 (148)
36 1yx7_A Calsensin, LAN3-6 antig 47.2 49 0.0017 20.7 5.4 54 41-94 9-73 (83)
37 1exr_A Calmodulin; high resolu 46.9 54 0.0019 22.8 6.1 52 43-94 87-143 (148)
38 2mys_B Myosin; muscle protein, 45.6 58 0.002 22.9 6.1 55 40-94 26-82 (166)
39 1s6j_A CDPK, calcium-dependent 45.5 30 0.001 22.0 4.2 42 43-84 27-68 (87)
40 2obh_A Centrin-2; DNA repair c 44.8 58 0.002 22.7 6.0 52 42-93 82-138 (143)
41 2opo_A Polcalcin CHE A 3; calc 44.7 32 0.0011 21.9 4.3 54 40-94 12-70 (86)
42 1k9u_A Polcalcin PHL P 7; poll 44.5 34 0.0012 21.3 4.3 40 44-84 8-47 (78)
43 2ovk_B RLC, myosin regulatory 44.3 38 0.0013 23.6 4.9 54 41-94 87-144 (153)
44 3ox6_A Calcium-binding protein 44.0 59 0.002 22.1 5.8 53 41-93 90-148 (153)
45 2ovk_B RLC, myosin regulatory 43.6 44 0.0015 23.2 5.1 55 40-94 17-72 (153)
46 2pmy_A RAS and EF-hand domain- 43.0 53 0.0018 21.5 5.2 44 39-84 27-70 (91)
47 1k2h_A S100A1, S-100 protein, 42.4 66 0.0023 20.6 5.9 55 40-94 10-76 (93)
48 1ggw_A Protein (CDC4P); light 42.3 34 0.0012 23.4 4.3 46 40-85 77-122 (140)
49 1k94_A Grancalcin; penta-EF-ha 41.9 70 0.0024 22.6 6.1 53 42-94 73-128 (165)
50 2zkr_g 60S acidic ribosomal pr 41.9 3.1 0.00011 36.3 -1.6 10 56-65 232-241 (317)
51 3qrx_A Centrin; calcium-bindin 41.9 68 0.0023 22.5 6.0 52 43-94 105-161 (169)
52 2qac_A Myosin A tail domain in 41.4 29 0.00099 24.0 3.8 44 41-84 86-129 (146)
53 3fwb_A Cell division control p 41.3 46 0.0016 23.1 4.9 44 42-85 99-142 (161)
54 2mys_C Myosin; muscle protein, 40.5 59 0.002 22.0 5.3 42 42-83 88-129 (149)
55 2qac_A Myosin A tail domain in 40.4 68 0.0023 22.0 5.7 54 41-94 16-71 (146)
56 3h4s_E KCBP interacting Ca2+-b 39.3 59 0.002 23.0 5.3 55 40-94 41-101 (135)
57 2bl0_C Myosin regulatory light 38.2 47 0.0016 22.6 4.5 43 43-85 83-125 (142)
58 2b1u_A Calmodulin-like protein 37.2 18 0.00063 22.0 2.0 40 45-84 12-51 (71)
59 1qx2_A Vitamin D-dependent cal 37.2 28 0.00094 21.4 2.9 44 41-84 7-54 (76)
60 3fwb_A Cell division control p 36.8 67 0.0023 22.1 5.2 55 40-94 24-83 (161)
61 1c7v_A CAVP, calcium vector pr 36.5 25 0.00086 22.2 2.6 41 44-84 13-54 (81)
62 3li6_A Calcium-binding protein 35.8 31 0.0011 20.6 2.9 50 45-94 6-60 (66)
63 2mys_B Myosin; muscle protein, 35.5 77 0.0026 22.3 5.4 53 42-94 98-155 (166)
64 1dtl_A Cardiac troponin C; hel 35.5 86 0.0029 21.7 5.6 55 40-94 19-79 (161)
65 2ovk_C Myosin catalytic light 35.4 45 0.0015 23.4 4.1 54 41-94 87-147 (159)
66 1top_A Troponin C; contractIle 35.1 92 0.0031 21.4 5.7 52 43-94 100-156 (162)
67 2bl0_C Myosin regulatory light 34.9 60 0.0021 22.0 4.6 42 43-84 10-51 (142)
68 3i5g_B Myosin regulatory light 34.8 36 0.0012 24.9 3.6 45 40-84 86-130 (153)
69 1rwy_A Parvalbumin alpha; EF-h 34.6 67 0.0023 21.1 4.7 45 40-84 42-89 (109)
70 2dhy_A CUE domain-containing p 34.6 65 0.0022 22.0 4.6 52 23-81 6-57 (67)
71 3rm1_A Protein S100-B; alpha-h 34.5 1E+02 0.0034 20.5 6.5 55 40-94 10-76 (92)
72 1k8u_A S100A6, calcyclin, CACY 32.8 58 0.002 20.7 4.0 55 40-94 11-75 (90)
73 1bu3_A Calcium-binding protein 32.8 71 0.0024 21.1 4.6 54 40-93 43-104 (109)
74 2pvb_A Protein (parvalbumin); 32.6 62 0.0021 21.3 4.3 54 40-93 42-103 (108)
75 3ox6_A Calcium-binding protein 32.5 1.1E+02 0.0039 20.5 7.6 55 40-94 12-71 (153)
76 2jnf_A Troponin C; stretch act 32.2 73 0.0025 22.0 4.8 53 42-94 94-151 (158)
77 1exr_A Calmodulin; high resolu 32.0 87 0.003 21.7 5.1 44 41-84 12-55 (148)
78 1uhk_A Aequorin 2, aequorin; E 32.0 73 0.0025 22.7 4.9 45 40-84 17-71 (191)
79 1pva_A Parvalbumin; calcium bi 31.9 67 0.0023 21.2 4.3 54 41-94 44-105 (110)
80 4ds7_A Calmodulin, CAM; protei 31.9 77 0.0026 21.4 4.7 55 40-94 12-71 (147)
81 1wdc_B Scallop myosin; calcium 31.8 95 0.0033 21.5 5.3 55 40-94 19-74 (156)
82 1gjy_A Sorcin, CP-22, V19; cal 31.7 80 0.0027 22.4 5.0 43 42-84 75-117 (167)
83 3i5g_B Myosin regulatory light 31.3 88 0.003 22.7 5.3 53 42-94 19-72 (153)
84 3qrx_A Centrin; calcium-bindin 30.9 96 0.0033 21.7 5.3 55 40-94 29-88 (169)
85 3kz3_A Repressor protein CI; f 30.3 47 0.0016 21.5 3.3 30 51-80 47-76 (80)
86 3fs7_A Parvalbumin, thymic; ca 30.2 71 0.0024 21.1 4.3 44 41-84 44-90 (109)
87 2jnf_A Troponin C; stretch act 30.2 73 0.0025 22.0 4.5 56 40-95 14-75 (158)
88 2bl0_B Myosin regulatory light 30.0 50 0.0017 22.4 3.5 55 40-94 77-136 (145)
89 2f2o_A Calmodulin fused with c 30.0 1.4E+02 0.0046 21.1 6.0 54 41-94 13-71 (179)
90 5pal_A Parvalbumin; calcium-bi 29.8 87 0.003 20.6 4.7 44 41-84 43-89 (109)
91 2jjz_A Ionized calcium-binding 29.8 58 0.002 23.5 4.0 55 40-94 51-110 (150)
92 2d58_A Allograft inflammatory 29.5 50 0.0017 22.2 3.4 55 40-94 33-92 (107)
93 1wdc_B Scallop myosin; calcium 29.5 62 0.0021 22.5 4.0 53 42-94 90-146 (156)
94 3j04_B Myosin regulatory light 29.3 37 0.0013 23.2 2.7 53 42-94 79-136 (143)
95 1dk0_A HASA, heme-binding prot 29.1 25 0.00085 28.9 2.0 67 11-79 89-169 (188)
96 1alv_A Calpain, S-camld; calci 28.5 92 0.0032 22.2 4.9 52 42-93 80-135 (173)
97 2aao_A CDPK, calcium-dependent 28.4 1.2E+02 0.0041 21.1 5.4 55 40-94 28-87 (166)
98 1juo_A Sorcin; calcium-binding 28.3 75 0.0026 23.4 4.5 52 43-94 107-161 (198)
99 1qjt_A EH1, epidermal growth f 27.7 1.1E+02 0.0038 20.9 5.0 53 40-94 12-69 (99)
100 2keb_A DNA polymerase subunit 27.5 84 0.0029 23.5 4.5 49 47-95 17-67 (101)
101 1y1x_A Leishmania major homolo 27.1 1.3E+02 0.0044 22.1 5.6 54 41-94 95-153 (191)
102 1k94_A Grancalcin; penta-EF-ha 27.1 1.2E+02 0.0041 21.3 5.3 13 56-68 37-49 (165)
103 2lnk_A Protein S100-A4; EF-han 26.9 1.2E+02 0.0041 21.8 5.3 55 40-94 23-89 (113)
104 1gjy_A Sorcin, CP-22, V19; cal 26.8 85 0.0029 22.3 4.4 24 47-70 9-32 (167)
105 2bec_A Calcineurin B homologou 26.8 1.1E+02 0.0038 22.4 5.2 55 40-94 115-179 (202)
106 1c07_A Protein (epidermal grow 26.8 1E+02 0.0036 20.6 4.7 43 40-84 11-53 (95)
107 2ast_A S-phase kinase-associat 26.5 99 0.0034 23.3 4.9 40 55-94 93-136 (159)
108 2lhi_A Calmodulin, serine/thre 26.5 67 0.0023 23.9 3.9 43 42-84 14-56 (176)
109 2f2o_A Calmodulin fused with c 26.3 1.1E+02 0.0038 21.6 5.0 52 43-94 88-144 (179)
110 2hpk_A Photoprotein berovin; s 26.3 1.4E+02 0.0047 22.0 5.6 53 42-96 131-188 (208)
111 2znd_A Programmed cell death p 26.2 1.3E+02 0.0043 21.4 5.3 53 42-94 77-134 (172)
112 3sjs_A URE3-BP sequence specif 26.2 1.1E+02 0.0037 23.5 5.2 54 41-94 119-176 (220)
113 1wy9_A Allograft inflammatory 25.9 57 0.0019 23.6 3.3 55 40-94 49-108 (147)
114 2y5i_A S100Z, S100 calcium bin 24.1 1.7E+02 0.006 19.9 5.8 55 40-94 11-77 (99)
115 3ll8_B Calcineurin subunit B t 23.5 1.6E+02 0.0053 20.0 5.2 54 41-94 77-140 (155)
116 2i7a_A Calpain 13; calcium-dep 22.8 84 0.0029 23.5 3.9 53 41-94 78-138 (174)
117 1m45_A MLC1P, myosin light cha 22.8 53 0.0018 22.5 2.5 42 43-84 87-128 (148)
118 1wdc_C Scallop myosin; calcium 22.3 76 0.0026 22.0 3.3 52 43-94 88-146 (156)
119 3e3r_A Calcyphosin, calcyphosi 22.3 1.5E+02 0.005 21.5 5.0 54 41-94 39-97 (204)
120 1fs1_B SKP1, cyclin A/CDK2-ass 21.9 1.6E+02 0.0055 21.8 5.3 39 55-93 88-130 (141)
121 1w7j_B Myosin light chain 1; m 21.7 43 0.0015 23.1 1.9 42 44-85 92-133 (151)
122 1rro_A RAT oncomodulin; calciu 20.3 91 0.0031 20.5 3.3 44 41-84 43-89 (108)
123 2ftc_E L12MT, MRP-L12, 39S rib 20.3 92 0.0031 24.2 3.6 23 78-100 4-29 (137)
124 2ct9_A Calcium-binding protein 20.0 1.8E+02 0.006 21.5 5.1 54 41-94 115-178 (208)
No 1
>3iz5_v 60S acidic ribosomal protein P21 - P2 (L12P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_v
Probab=100.00 E-value=5.2e-42 Score=265.13 Aligned_cols=113 Identities=48% Similarity=0.804 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCCCCHHHHHHhhhhhhccCCCCCCccchhccccC
Q psy2830 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKEKLASMPSGGGAVSASAGAAA 118 (183)
Q Consensus 39 M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~GKdI~ELIa~G~~KL~sv~sGG~aaaa~aaaaa 118 (183)
|+|||||||++++||.+||++||++||+++||+|+++|+.+|++.|+||||+|||++|++||.|||+||+++++++++ +
T Consensus 1 M~yvaAylL~~l~G~~~ptad~I~~ILkAaGveVe~~~~~lf~~aL~gk~I~eLIa~G~~kl~~v~~gg~aa~a~a~a-~ 79 (113)
T 3iz5_v 1 MKFIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLSQVKGKDITELLAAGREKFAAVPSGGGGVAVSAAA-P 79 (113)
T ss_dssp CHHHHHHHHHHHHTCCCCTTTTHHHHHHHHTCCCCHHHHHHHHHHHTTCCHHHHHHSCC---------------------
T ss_pred CHHHHHHHHHHHcCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhcCCCHHHHHHhhHHHhccCCCccccccccccc-c
Confidence 899999999999999999999999999999999999999999999999999999999999999999988765421111 1
Q ss_pred ccccccccchHHHHhhhhhccccccCCcCccccc
Q psy2830 119 PAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152 (183)
Q Consensus 119 ~A~~~aaaaa~~~eeek~EeeEEsDdDMGFgLFD 152 (183)
++++++++++++++++|+|++|||||||||||||
T Consensus 80 a~~~~a~~a~~~~~e~k~ee~EEsDdDmGFgLFD 113 (113)
T 3iz5_v 80 AAGGAAAPAAESKKEEKVVEKEESDDDMGFSLFD 113 (113)
T ss_dssp ----------------------------------
T ss_pred cccccccccchhhhhhhcccccccccccccCcCC
Confidence 1111111123345566677888999999999997
No 2
>3izc_v 60S acidic ribosomal protein (P2); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_v
Probab=100.00 E-value=2.7e-39 Score=247.35 Aligned_cols=106 Identities=43% Similarity=0.772 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCCCCHHHHHHhhhhhhccCCCCCCccchhccccC
Q psy2830 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKEKLASMPSGGGAVSASAGAAA 118 (183)
Q Consensus 39 M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~GKdI~ELIa~G~~KL~sv~sGG~aaaa~aaaaa 118 (183)
|+|+|||||++++|+. ||++||++||+++||+|+++|+.+|++.|+||||+|||++|++||+++|+||++++ +++ +
T Consensus 1 M~yvaAyLL~~~gG~e-~tad~I~~ilkAaGveVe~~~~~~f~~aL~gkdI~eLIa~g~~klasv~sgg~a~a--a~a-~ 76 (106)
T 3izc_v 1 MKYLAAYLLLNAAGNT-PDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKLAAVPAAGPASA--GGA-A 76 (106)
T ss_dssp CHHHHHHHHHHHHTCC-CTTTTHHHHHHHHTCCCCHHHHHHHHHHHTTCCHHHHHHSCC---------------------
T ss_pred CHHHHHHHHHHhcCCC-CCHHHHHHHHHHcCCCcCHHHHHHHHHHcCCCCHHHHHHhhhHHhccCCCcccccc--ccc-c
Confidence 8999999999999997 99999999999999999999999999999999999999999999999999887644 111 1
Q ss_pred ccccccccchHHHHhhhhhccccccCCcCccccc
Q psy2830 119 PAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152 (183)
Q Consensus 119 ~A~~~aaaaa~~~eeek~EeeEEsDdDMGFgLFD 152 (183)
++++ ++++++++|+|++|||||||||||||
T Consensus 77 ~a~~----~~~~~~e~kee~~EEsdddmGfgLFd 106 (106)
T 3izc_v 77 AASG----DAAAEEEKEEEAAEESDDDMGFGLFD 106 (106)
T ss_dssp ----------------------------------
T ss_pred cccc----ccccccccccccccccccccCCCCCC
Confidence 1111 12234455667788999999999997
No 3
>3iz5_t 60S acidic ribosomal protein P11 - P1 (L12P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_t
Probab=100.00 E-value=5.2e-34 Score=219.47 Aligned_cols=104 Identities=31% Similarity=0.496 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCCCCHHHHHHhhhhhhccCCCCCCccchhccccC
Q psy2830 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKEKLASMPSGGGAVSASAGAAA 118 (183)
Q Consensus 39 M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~GKdI~ELIa~G~~KL~sv~sGG~aaaa~aaaaa 118 (183)
.|.||+++|++ ++.+||++||++||+++||+|+++|+.+|+++|+||||++||+ ++++||+++++++++ +
T Consensus 7 a~~YaaLiL~d--~~~~itad~I~~ilkAaGveVe~~~~~lfakaL~gknI~eLI~-------sv~~gg~a~~a~a~~-a 76 (110)
T 3iz5_t 7 ACTLAALILHD--DGIPITSEKIATVVKAAGIKVEAYWPALFAKLLEKRSVDDLIL-------SVGSGGGGAPAAAAA-A 76 (110)
T ss_dssp HHHHHHHHHHH--HTCCCSHHHHHHHHHHHTCCCCSHHHHHHHHHHTTCCHHHHHT-------CCC--------------
T ss_pred HHHHHHHHHcC--CCCCcChHHHHHHHHHhCCcccHHHHHHHHHHcCCCCHHHHHh-------cCCCccccccccccc-c
Confidence 49999999999 4567999999999999999999999999999999999999996 788887654321111 1
Q ss_pred ccccccccchHHHHhhhhhccccccCCcCccccc
Q psy2830 119 PAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152 (183)
Q Consensus 119 ~A~~~aaaaa~~~eeek~EeeEEsDdDMGFgLFD 152 (183)
++++++++++++++++|+|++|||||||||||||
T Consensus 77 ~~~~~~~~a~~~~~e~k~ee~EEsddDmGfgLFd 110 (110)
T 3iz5_t 77 PAAGGAAAAEEKKEEKKEEAKEESDDDMGFSLFD 110 (110)
T ss_dssp ----------------------------------
T ss_pred ccccccccccchhhhhccccccccccccccccCC
Confidence 1111111123334556667888999999999997
No 4
>3izc_t 60S acidic ribosomal protein RPP11 (P1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_t
Probab=99.97 E-value=1.4e-32 Score=210.17 Aligned_cols=101 Identities=26% Similarity=0.435 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCCCCHHHHHHhhhhhhccCCCCCCccchhccccC
Q psy2830 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKEKLASMPSGGGAVSASAGAAA 118 (183)
Q Consensus 39 M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~GKdI~ELIa~G~~KL~sv~sGG~aaaa~aaaaa 118 (183)
.|.|++++|++ .+.+||++||++||+++||+|+++|+.+|+++|+||||++||+ ++++||+++++++ +
T Consensus 6 a~~YaaLiL~d--~~~~~tad~I~~ilkAaGveVe~~~~~lfa~aL~gknI~eLI~-------~~~ag~~~~aa~a---~ 73 (106)
T 3izc_t 6 ALSYAALILAD--SEIEISSEKLLTLTNAANVPDENIWADIFAKALDGQNLKDLLV-------NFSAGAAAPAGVA---G 73 (106)
T ss_dssp HHHHHHHHHHH--HTCCCSHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCHHHHTT-------CCC--------------
T ss_pred HHHHHHHHHcC--CCCCCCHHHHHHHHHHcCCcccHHHHHHHHHHhcCCCHHHHHH-------hccCcCccccccc---c
Confidence 38889998888 4467999999999999999999999999999999999999997 5776665443111 1
Q ss_pred ccccccccchHHHHhhhhhccccccCCcCccccc
Q psy2830 119 PAAAAEEGKKEEKKAEKKEESDASDDDMGFGVWE 152 (183)
Q Consensus 119 ~A~~~aaaaa~~~eeek~EeeEEsDdDMGFgLFD 152 (183)
++++ +++++++++++|+|++|||||||||||||
T Consensus 74 ~a~~-~~~a~~~~~~~kee~~EEsddDmGfgLFd 106 (106)
T 3izc_t 74 GVAG-GEAGEAEAEKEEEEAKEESDDDMGFGLFD 106 (106)
T ss_dssp ----------------------------------
T ss_pred cccc-cccccchhhhhhcccccccccccccCcCC
Confidence 1111 11122334455667788999999999997
No 5
>2lbf_B 60S acidic ribosomal protein P2; ribosome, stalk, P1/P2; NMR {Homo sapiens} PDB: 2w1o_A
Probab=99.91 E-value=3.8e-25 Score=158.28 Aligned_cols=70 Identities=61% Similarity=1.012 Sum_probs=67.9
Q ss_pred hhHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCCCCHHHHHHhhhhhhccCCCCC
Q psy2830 38 IMRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAAGKEKLASMPSGG 107 (183)
Q Consensus 38 ~M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~GKdI~ELIa~G~~KL~sv~sGG 107 (183)
+|+|++||||++++|+.+||++||++||+++|++||++|+++|+++|+||||+|||++|++||+|+|+||
T Consensus 1 ~M~yvyA~Lll~~~g~~~~ta~~I~~il~aaGvevd~~~~~~~~~aL~gk~i~elIa~g~~kl~s~p~gg 70 (70)
T 2lbf_B 1 AMRYVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVPAGG 70 (70)
T ss_dssp CCCTHHHHHHHHHHTCSSCCHHHHHHHHHTTTCCCCTTHHHHHHHHHSSCCHHHHHTTCSSSCSSCCCCC
T ss_pred CcHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCC
Confidence 4899999999999999889999999999999999999999999999999999999999999999999886
No 6
>2lbf_A 60S acidic ribosomal protein P1; ribosome, stalk, P1/P2; NMR {Homo sapiens}
Probab=99.77 E-value=4.9e-19 Score=126.04 Aligned_cols=54 Identities=13% Similarity=0.201 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCCCCHHHHHH
Q psy2830 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIA 94 (183)
Q Consensus 39 M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~GKdI~ELIa 94 (183)
.|.||||+|++.| .+||++||++||+++|++||++|+.+|+++|+||||+|||+
T Consensus 8 a~~YAAllL~~~g--~~~ta~~I~~il~AaGveve~~~~~lf~~aL~gk~I~elI~ 61 (69)
T 2lbf_A 8 ACIYSALILHDDE--VTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLIC 61 (69)
T ss_dssp HHHHHHHHHHHHT--CCCCHHHHHHHHHHHTCCCCTHHHHHHHHHTTTSCGGGGGT
T ss_pred HHHHHHHHHHcCC--CCCCHHHHHHHHHHcCCCccHHHHHHHHHHHCCCCHHHHHH
Confidence 3999999999985 47999999999999999999999999999999999999997
No 7
>3a1y_A 50S ribosomal protein P1 (L12P); stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=99.74 E-value=6.4e-18 Score=116.54 Aligned_cols=56 Identities=30% Similarity=0.557 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCCCCHHHHHHh
Q psy2830 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEEIIAA 95 (183)
Q Consensus 39 M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~GKdI~ELIa~ 95 (183)
|+|++||+|++.+|+ +||++||++||+++|++||++|+.+|+++|+||||+|||++
T Consensus 1 m~~~yAallL~~~g~-~~t~~~I~~il~aaGveve~~~~~~~~~~L~gk~i~elI~~ 56 (58)
T 3a1y_A 1 MEYVYAALLLHSVGK-EINEENLKAVLQAAGVEPEEARIKALVAALEGVNIDEVIEK 56 (58)
T ss_dssp CHHHHHHHHHHHTTC-CCCHHHHHHHHHHTTCCCCHHHHHHHHHHHSSCCHHHHHHH
T ss_pred CHHHHHHHHHHhCCC-CCCHHHHHHHHHHcCCCccHHHHHHHHHHHCCCCHHHHHHc
Confidence 566666555555655 79999999999999999999999999999999999999974
No 8
>2zkr_g 60S acidic ribosomal protein P0; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=98.88 E-value=2e-11 Score=107.52 Aligned_cols=22 Identities=59% Similarity=1.034 Sum_probs=9.1
Q ss_pred HHhhhhhccccccCCcCccccc
Q psy2830 131 KKAEKKEESDASDDDMGFGVWE 152 (183)
Q Consensus 131 ~eeek~EeeEEsDdDMGFgLFD 152 (183)
++++++||+|||||||||||||
T Consensus 296 ~~~~~~ee~ee~d~d~gf~lfd 317 (317)
T 2zkr_g 296 AKVEAKEESEESDEDMGFGLFD 317 (317)
T ss_dssp HSTTHHHHTSSCC---------
T ss_pred ccccccCCccccccccCcCCCC
Confidence 4455666778899999999997
No 9
>3iz5_s 60S acidic ribosomal protein P0 (L10P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_s
Probab=98.81 E-value=1.4e-09 Score=95.95 Aligned_cols=22 Identities=27% Similarity=0.685 Sum_probs=0.0
Q ss_pred HHhhhhhccccccCCcCccccc
Q psy2830 131 KKAEKKEESDASDDDMGFGVWE 152 (183)
Q Consensus 131 ~eeek~EeeEEsDdDMGFgLFD 152 (183)
++++++|++|||||||||||||
T Consensus 298 ~~~~~~e~~ee~d~d~gf~lfd 319 (319)
T 3iz5_s 298 EEEKKEEPEEESDGDLGMSLFD 319 (319)
T ss_dssp ----------------------
T ss_pred cccccccccccccccCCCCCCC
Confidence 3455667778889999999997
No 10
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=98.73 E-value=7.2e-10 Score=97.45 Aligned_cols=22 Identities=45% Similarity=0.894 Sum_probs=0.0
Q ss_pred HHhhhhhccccccCCcCccccc
Q psy2830 131 KKAEKKEESDASDDDMGFGVWE 152 (183)
Q Consensus 131 ~eeek~EeeEEsDdDMGFgLFD 152 (183)
++++++|++|||||||||||||
T Consensus 291 ~~~~~~e~~ee~d~d~gf~lfd 312 (312)
T 3u5i_q 291 AEEAAAEEEEESDDDMGFGLFD 312 (312)
T ss_dssp ----------------------
T ss_pred cccccccccccccccCCCCCCC
Confidence 3445567778889999999997
No 11
>3iz5_t 60S acidic ribosomal protein P11 - P1 (L12P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_t
Probab=93.78 E-value=0.074 Score=40.42 Aligned_cols=26 Identities=38% Similarity=0.530 Sum_probs=21.0
Q ss_pred HHHHcCCCcCHHHHHHHHHHhCCCCHH
Q psy2830 64 ILSSVGIESDAEKLKIVLKELNGKNLE 90 (183)
Q Consensus 64 VLkAaGveVe~~~~~lFakaL~GKdI~ 90 (183)
||.-.|+++....++.++++. |.+|+
T Consensus 14 iL~d~~~~itad~I~~ilkAa-GveVe 39 (110)
T 3iz5_t 14 ILHDDGIPITSEKIATVVKAA-GIKVE 39 (110)
T ss_dssp HHHHHTCCCSHHHHHHHHHHH-TCCCC
T ss_pred HHcCCCCCcChHHHHHHHHHh-CCccc
Confidence 677888999999999888875 66665
No 12
>3izc_t 60S acidic ribosomal protein RPP11 (P1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_t
Probab=93.46 E-value=0.12 Score=39.01 Aligned_cols=38 Identities=24% Similarity=0.195 Sum_probs=28.6
Q ss_pred hhHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCCCCHHH
Q psy2830 38 IMRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNGKNLEE 91 (183)
Q Consensus 38 ~M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~GKdI~E 91 (183)
||+|.++|+++ ||.-.|+++....++.++++. |.+|+.
T Consensus 2 s~ela~~YaaL---------------iL~d~~~~~tad~I~~ilkAa-GveVe~ 39 (106)
T 3izc_t 2 STESALSYAAL---------------ILADSEIEISSEKLLTLTNAA-NVPDEN 39 (106)
T ss_dssp ---CHHHHHHH---------------HHHHHTCCCSHHHHHHHHHHH-TCCCCH
T ss_pred chHHHHHHHHH---------------HHcCCCCCCCHHHHHHHHHHc-CCcccH
Confidence 46888888765 578889999999999999976 767764
No 13
>3j21_k Acidic ribosomal protein P0 homolog; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=89.89 E-value=0.06 Score=47.49 Aligned_cols=10 Identities=30% Similarity=0.670 Sum_probs=0.0
Q ss_pred CCHHHHHHHH
Q psy2830 56 PAQGDVEKIL 65 (183)
Q Consensus 56 pTaedI~kVL 65 (183)
||.+-+..+|
T Consensus 234 pT~~svp~~i 243 (339)
T 3j21_k 234 PTPQTIEAII 243 (339)
T ss_dssp ----------
T ss_pred CCHHHHHHHH
Confidence 6666665554
No 14
>3iz5_v 60S acidic ribosomal protein P21 - P2 (L12P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_v
Probab=73.35 E-value=0.69 Score=35.19 Aligned_cols=15 Identities=27% Similarity=0.242 Sum_probs=10.6
Q ss_pred CCCCHHHHHHHHHHc
Q psy2830 54 ENPAQGDVEKILSSV 68 (183)
Q Consensus 54 ~spTaedI~kVLkAa 68 (183)
.++....+..++++.
T Consensus 32 veVe~~~~~lf~~aL 46 (113)
T 3iz5_v 32 CEIDNEKMELMLSQV 46 (113)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHh
Confidence 357777777777766
No 15
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=62.41 E-value=17 Score=23.63 Aligned_cols=55 Identities=16% Similarity=0.390 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++..++-+++..++-.|+.+++..+|...|..+....+..+++.+.. .++.|.+.
T Consensus 21 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~ 80 (90)
T 1avs_A 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80 (90)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 45567777787777779999999999999999888888888877731 35666664
No 16
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=61.93 E-value=35 Score=23.27 Aligned_cols=54 Identities=19% Similarity=0.332 Sum_probs=37.0
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh-------CCCCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL-------NGKNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL-------~GKdI~ELIa 94 (183)
+..++-+++..++-.|+.+++..+|...|..+....+..+++.+ ...++.+.+.
T Consensus 10 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~g~i~~~eF~~ 70 (149)
T 2mys_C 10 FKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLP 70 (149)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccCCcCcHHHHHH
Confidence 34455566665566788888888888888887777777776666 2356666664
No 17
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=59.31 E-value=23 Score=24.68 Aligned_cols=54 Identities=15% Similarity=0.314 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEII 93 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELI 93 (183)
..-.++-+++..++-.|+.++++.+|+..|..+....+..+++.+.- .+.+|.+
T Consensus 37 el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~ 95 (100)
T 2lv7_A 37 EIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFV 95 (100)
T ss_dssp HHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHH
T ss_pred HHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHH
Confidence 44567888898888889999999999999999888878877777621 4555555
No 18
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=58.86 E-value=22 Score=23.06 Aligned_cols=55 Identities=15% Similarity=0.240 Sum_probs=41.3
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++..++-+++..++-.|+.+++..+|...|..+....+..+++.+.. .+..|.+.
T Consensus 10 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~ 69 (92)
T 2kn2_A 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69 (92)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHH
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 34556667777666679999999999999988888888877777741 46667664
No 19
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=57.84 E-value=30 Score=23.19 Aligned_cols=55 Identities=15% Similarity=0.302 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
+...++-+++..++-.|+.+++..+|...|..+....+..+++.+.. .++.|.+.
T Consensus 30 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~ 89 (94)
T 2kz2_A 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89 (94)
T ss_dssp HHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 34456777787777789999999999999998888888888777731 45666654
No 20
>3izc_v 60S acidic ribosomal protein (P2); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_v
Probab=57.35 E-value=2.2 Score=31.98 Aligned_cols=14 Identities=21% Similarity=0.354 Sum_probs=8.2
Q ss_pred CCCHHHHHHHHHHc
Q psy2830 55 NPAQGDVEKILSSV 68 (183)
Q Consensus 55 spTaedI~kVLkAa 68 (183)
++....+..++++.
T Consensus 32 eVe~~~~~~f~~aL 45 (106)
T 3izc_v 32 EIEDEKVSSVLSAL 45 (106)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHc
Confidence 45666666666555
No 21
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=55.08 E-value=62 Score=24.05 Aligned_cols=55 Identities=16% Similarity=0.274 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-KdI~ELIa 94 (183)
.+..++-+++..++-.||.+++..+|...|..+....+..++..+.| .++.+.+.
T Consensus 58 ~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~~g~i~~~eF~~ 113 (196)
T 3dtp_E 58 EFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLT 113 (196)
T ss_dssp HHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTSSSCCBHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCcHHHHHH
Confidence 55667777787677789999999999999999888888877776655 67777775
No 22
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=54.85 E-value=31 Score=22.05 Aligned_cols=45 Identities=7% Similarity=0.090 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHH---HHHHHHHh
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEK---LKIVLKEL 84 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~---~~lFakaL 84 (183)
+...++-+++..++-.|+.+++..+|...|..+.... +..+++.+
T Consensus 15 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~ 62 (86)
T 1j7q_A 15 ECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGP 62 (86)
T ss_dssp HHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHh
Confidence 3445666777766667999999999999998888777 66666655
No 23
>3iz5_s 60S acidic ribosomal protein P0 (L10P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_s
Probab=54.08 E-value=2.7 Score=36.75 Aligned_cols=28 Identities=18% Similarity=0.214 Sum_probs=17.2
Q ss_pred hhhhhHHHHHHHHHHhCCCCCCCHHHHHHHHH
Q psy2830 35 YLRIMRYVAAYLLAALGGKENPAQGDVEKILS 66 (183)
Q Consensus 35 ~~~~M~ylAAylL~~lgGn~spTaedI~kVLk 66 (183)
|+...+.++++.|.. | -||.+.|..+|-
T Consensus 218 ~~~~~~~~~~lsl~~--~--ypt~~s~~~~i~ 245 (319)
T 3iz5_s 218 FASGVSMVASVSLAI--S--YPTIAAAPHMFL 245 (319)
T ss_dssp HHHHHHHHHHHHHHH--T--CCSTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHh--C--CCcHHHHHHHHH
Confidence 434456666766665 2 378877776663
No 24
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=54.06 E-value=26 Score=20.93 Aligned_cols=42 Identities=5% Similarity=0.022 Sum_probs=30.5
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
.++-+++..++-.++.+++..++...|..+....+..+++.+
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~ 46 (67)
T 1tiz_A 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEI 46 (67)
T ss_dssp HHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 344555665566688888888888888887777777776666
No 25
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=54.00 E-value=25 Score=25.95 Aligned_cols=54 Identities=9% Similarity=0.205 Sum_probs=44.1
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-------CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-------KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-------KdI~ELIa 94 (183)
...|+-+++..|+-.||.++++.||+..|..+...-+..+++.+.. .+++|.+.
T Consensus 87 l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~ 147 (159)
T 3i5g_C 87 FMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMK 147 (159)
T ss_dssp HHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHH
T ss_pred HHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHH
Confidence 5567888888777789999999999999999999988888887741 45677764
No 26
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=53.82 E-value=18 Score=22.50 Aligned_cols=55 Identities=7% Similarity=0.192 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++..++-+++..++-.|+.+++..+|...|..+....+..+++.+.. .+..|.+.
T Consensus 8 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~ 67 (77)
T 2joj_A 8 EIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLD 67 (77)
T ss_dssp HHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHH
Confidence 34456666776666678999999999998888877777777776631 34556554
No 27
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=52.60 E-value=18 Score=23.07 Aligned_cols=55 Identities=13% Similarity=0.323 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++..++-+++..++-.|+.+++..+|...|..+....+..+++.+.. .+..|.+.
T Consensus 15 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~ 74 (85)
T 2ktg_A 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74 (85)
T ss_dssp HHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 44566777777666679999999999999998888888877777731 45666664
No 28
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=52.40 E-value=44 Score=22.14 Aligned_cols=55 Identities=5% Similarity=0.009 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC-----CCCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN-----GKNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~-----GKdI~ELIa 94 (183)
....++-+++..++-.|+.+++..+|...|..+....+..+++.+. ..++.|.+.
T Consensus 25 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~ 84 (105)
T 1wlz_A 25 AITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLS 84 (105)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHH
Confidence 3445677778777778999999999999999988888888887774 257778875
No 29
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=51.88 E-value=26 Score=25.23 Aligned_cols=55 Identities=9% Similarity=0.087 Sum_probs=43.4
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHHhhh
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIAAGK 97 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa~G~ 97 (183)
.++-+++..++-.||.+++..++...|..+....+..+++.+.. .+..|.+..-.
T Consensus 113 ~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~ 172 (191)
T 1uhk_A 113 ALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172 (191)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 56777777777779999999999999999888888888888742 46677775433
No 30
>3j21_k Acidic ribosomal protein P0 homolog; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=51.49 E-value=3.1 Score=36.49 Aligned_cols=12 Identities=25% Similarity=0.266 Sum_probs=0.0
Q ss_pred HhCCCCHHHHHH
Q psy2830 83 ELNGKNLEEIIA 94 (183)
Q Consensus 83 aL~GKdI~ELIa 94 (183)
.+.+..++|-+.
T Consensus 282 ~~~~~~~~e~~~ 293 (339)
T 3j21_k 282 QLPEDVLDEKTK 293 (339)
T ss_dssp ------------
T ss_pred hhccccchhHHh
Confidence 334444444443
No 31
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=51.14 E-value=37 Score=23.08 Aligned_cols=44 Identities=16% Similarity=0.343 Sum_probs=36.2
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN 85 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~ 85 (183)
..++-+++..++-.||.+++..++...|..+....+..+++.+.
T Consensus 87 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d 130 (147)
T 4ds7_A 87 LEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS 130 (147)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS
T ss_pred HHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Confidence 34566677766677999999999999999999988888888774
No 32
>3u5i_q A0, L10E, 60S acidic ribosomal protein P0; translation, ribosome, ribosomal R ribosomal protein, STM1; 3.00A {Saccharomyces cerevisiae} PDB: 4b6a_q 3izc_s 3izs_s 3j16_G* 3o5h_M 3jyw_8
Probab=48.92 E-value=3.6 Score=35.81 Aligned_cols=10 Identities=30% Similarity=0.404 Sum_probs=0.0
Q ss_pred CCHHHHHHHH
Q psy2830 56 PAQGDVEKIL 65 (183)
Q Consensus 56 pTaedI~kVL 65 (183)
||.+.|..+|
T Consensus 230 pt~~s~~~~i 239 (312)
T 3u5i_q 230 PTLPSVGHTL 239 (312)
T ss_dssp ----------
T ss_pred CcHHHHHHHH
Confidence 6766665554
No 33
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=47.93 E-value=33 Score=25.66 Aligned_cols=55 Identities=16% Similarity=0.335 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G----KdI~ELIa 94 (183)
....|+-+++..++-.||.++++.+|...|..+....+..+++.+.. .+++|.+.
T Consensus 85 ~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~dd~dG~I~~~EF~~ 143 (176)
T 2lhi_A 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVSDGSGEINIQQFAA 143 (176)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTTSSCBCTTHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhcCCCCeEeHHHHHH
Confidence 46678888898888889999999999999999988888877776632 45667664
No 34
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=47.80 E-value=22 Score=25.79 Aligned_cols=53 Identities=11% Similarity=0.147 Sum_probs=39.2
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHHh
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIAA 95 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa~ 95 (183)
.++-+++..++-.||.+++..++...|..+....+..+++.+.. .+..|.+..
T Consensus 117 ~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~ 174 (195)
T 1qv0_A 117 AVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 174 (195)
T ss_dssp HHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred HHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHH
Confidence 56667776666779999999999999999888888888888732 456777754
No 35
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=47.26 E-value=42 Score=23.75 Aligned_cols=44 Identities=11% Similarity=0.232 Sum_probs=37.9
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
...|+-+++..++-.||.++++.+|...|..+....+..+++.+
T Consensus 85 l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~ 128 (148)
T 2lmt_A 85 MREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREA 128 (148)
T ss_dssp HHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHh
Confidence 45678888887787899999999999999999888888877776
No 36
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=47.24 E-value=49 Score=20.73 Aligned_cols=54 Identities=17% Similarity=0.236 Sum_probs=36.3
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcC--CCcCHHHHHH----HHHHhC----C-CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVG--IESDAEKLKI----VLKELN----G-KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaG--veVe~~~~~l----FakaL~----G-KdI~ELIa 94 (183)
...++-+++..++-.|+.+++..++...| ..+....+.. +++.+. | .+..|.+.
T Consensus 9 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~ 73 (83)
T 1yx7_A 9 LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLN 73 (83)
T ss_dssp HHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 34566677877777799999999999998 6666555555 554442 1 45556654
No 37
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=46.92 E-value=54 Score=22.76 Aligned_cols=52 Identities=13% Similarity=0.298 Sum_probs=40.2
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
.++-.++..++-.||.+++..++...|..+....+..+++.+.. .+..|.+.
T Consensus 87 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~ 143 (148)
T 1exr_A 87 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVR 143 (148)
T ss_dssp HHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHH
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 46677777777789999999999999999888888887777631 45566553
No 38
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=45.63 E-value=58 Score=22.95 Aligned_cols=55 Identities=16% Similarity=0.332 Sum_probs=41.6
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCC-CcCHHHHHHHHHHhCC-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGI-ESDAEKLKIVLKELNG-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGv-eVe~~~~~lFakaL~G-KdI~ELIa 94 (183)
++..++-+++..++-.||.+++..+|...|. .+....+..+++...| .++.|.+.
T Consensus 26 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~dg~i~~~eF~~ 82 (166)
T 2mys_B 26 DFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGPINFTVFLT 82 (166)
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCCcCHHHHHH
Confidence 4556677778766777999999999999998 8887777766666554 56677765
No 39
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=45.48 E-value=30 Score=21.98 Aligned_cols=42 Identities=12% Similarity=0.143 Sum_probs=34.2
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
.++-+++..++-.|+.+++..+|...|..+....+..+++.+
T Consensus 27 ~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~ 68 (87)
T 1s6j_A 27 ELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAA 68 (87)
T ss_dssp THHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 455566776677799999999999999998888888777776
No 40
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=44.81 E-value=58 Score=22.69 Aligned_cols=52 Identities=13% Similarity=0.222 Sum_probs=39.6
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEII 93 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELI 93 (183)
..|+-+++..++-.||.+++..++...|..+....+..+++.+.. .+.+|.+
T Consensus 82 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~ 138 (143)
T 2obh_A 82 LKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 138 (143)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHH
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 456777777777789999999999999988888878877776631 3455554
No 41
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=44.69 E-value=32 Score=21.87 Aligned_cols=54 Identities=11% Similarity=0.294 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
++..++-+++..++-.|+.+++..+|...| .+....+..+++.+. | .+..|.+.
T Consensus 12 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~ 70 (86)
T 2opo_A 12 DRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTD 70 (86)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 344556666766666788888888888888 777777777666662 1 35556553
No 42
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=44.47 E-value=34 Score=21.31 Aligned_cols=40 Identities=13% Similarity=0.322 Sum_probs=24.5
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 44 AYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 44 AylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
++-+++..++-.|+.+++..+|...| .+....+..+++.+
T Consensus 8 ~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~ 47 (78)
T 1k9u_A 8 IFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEI 47 (78)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHH
T ss_pred HHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHh
Confidence 44455555555577777777777776 66666666555555
No 43
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=44.27 E-value=38 Score=23.57 Aligned_cols=54 Identities=17% Similarity=0.229 Sum_probs=41.8
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC---C-CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN---G-KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~---G-KdI~ELIa 94 (183)
...++-+++..++-.||.+++..+|...|..+.+..+..+++.+. | .+..|.+.
T Consensus 87 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~dg~I~~~eF~~ 144 (153)
T 2ovk_B 87 LRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLKNKQFNYNKMVD 144 (153)
T ss_dssp HHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHCCEETTEECHHHHHH
T ss_pred HHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCEEeHHHHHH
Confidence 456677777767778999999999999999998888888888774 2 45566554
No 44
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=44.00 E-value=59 Score=22.08 Aligned_cols=53 Identities=9% Similarity=0.284 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHH-cCCCcCHHHHHHHHHHhCC-----CCHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSS-VGIESDAEKLKIVLKELNG-----KNLEEII 93 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkA-aGveVe~~~~~lFakaL~G-----KdI~ELI 93 (183)
...++-.++..++-.||.+++..+|.. .|..+....+..+++.+.. .+..|.+
T Consensus 90 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~ 148 (153)
T 3ox6_A 90 LRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148 (153)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence 345677777766677999999999999 8999988888888877731 4455555
No 45
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=43.56 E-value=44 Score=23.25 Aligned_cols=55 Identities=20% Similarity=0.304 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-KdI~ELIa 94 (183)
++..++-+++..++-.||.+++..+|...|..+....+..+...+.| .+..|.+.
T Consensus 17 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~ 72 (153)
T 2ovk_B 17 ELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLT 72 (153)
T ss_dssp HHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHSSSCCCSHHHHH
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCHHHHHH
Confidence 44556667777667789999999999999999988888888777754 56778775
No 46
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=43.01 E-value=53 Score=21.55 Aligned_cols=44 Identities=7% Similarity=0.145 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 39 MRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 39 M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
-++..++-+++..++-.|+.+++..+|...| +....+..+++.+
T Consensus 27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~ 70 (91)
T 2pmy_A 27 ARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRL 70 (91)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHh
Confidence 3566778888877777899999999999998 4555566666655
No 47
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=42.40 E-value=66 Score=20.65 Aligned_cols=55 Identities=16% Similarity=0.480 Sum_probs=40.9
Q ss_pred HHHHHHHHHH-hCCCC-CCCHHHHHHHHHH-----cCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAA-LGGKE-NPAQGDVEKILSS-----VGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~-lgGn~-spTaedI~kVLkA-----aGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
+...++-+++ ..++- .|+.+++..+|.. .|..+....+..+++.+. | .+..|.+.
T Consensus 10 ~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 76 (93)
T 1k2h_A 10 TLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVV 76 (93)
T ss_dssp HHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHH
T ss_pred HHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 3445677777 56665 7999999999998 888888888887777662 1 57777664
No 48
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=42.35 E-value=34 Score=23.39 Aligned_cols=46 Identities=17% Similarity=0.316 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN 85 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~ 85 (183)
....++-+++..++-.||.+++..++...|..+....+..+++.+.
T Consensus 77 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d 122 (140)
T 1ggw_A 77 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 122 (140)
T ss_dssp HHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhcc
Confidence 3455666777666667999999999999998888888887777764
No 49
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=41.95 E-value=70 Score=22.60 Aligned_cols=53 Identities=9% Similarity=0.261 Sum_probs=39.1
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC---CCHHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG---KNLEEIIA 94 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G---KdI~ELIa 94 (183)
..++-+++..++-.||.+++..++...|..+....+..+++.+.+ .+..|.+.
T Consensus 73 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~dg~i~~~eF~~ 128 (165)
T 1k94_A 73 KENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGRIFFDDYVA 128 (165)
T ss_dssp HHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCBTTBCBHHHHHH
T ss_pred HHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCeEcHHHHHH
Confidence 455667777667779999999999999998888877777776621 34555553
No 50
>2zkr_g 60S acidic ribosomal protein P0; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=41.91 E-value=3.1 Score=36.34 Aligned_cols=10 Identities=20% Similarity=0.408 Sum_probs=0.0
Q ss_pred CCHHHHHHHH
Q psy2830 56 PAQGDVEKIL 65 (183)
Q Consensus 56 pTaedI~kVL 65 (183)
||.+.|..+|
T Consensus 232 pt~~s~~~~i 241 (317)
T 2zkr_g 232 PTVASVPHSI 241 (317)
T ss_dssp ----------
T ss_pred CcHHHHHHHH
Confidence 6666665554
No 51
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=41.85 E-value=68 Score=22.49 Aligned_cols=52 Identities=17% Similarity=0.241 Sum_probs=41.0
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC-----CCCHHHHHH
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN-----GKNLEEIIA 94 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~-----GKdI~ELIa 94 (183)
.++-.++..++-.||.+++..++...|..+.+..+..+++.+. ..+++|.+.
T Consensus 105 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~ 161 (169)
T 3qrx_A 105 KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIR 161 (169)
T ss_dssp HHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHH
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHH
Confidence 4566667667778999999999999999999888888888773 146677664
No 52
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=41.36 E-value=29 Score=24.02 Aligned_cols=44 Identities=9% Similarity=0.085 Sum_probs=34.3
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
...++-+++..++-.||.+++..++...|..+.+..+..+++.+
T Consensus 86 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 129 (146)
T 2qac_A 86 LIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF 129 (146)
T ss_dssp HHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc
Confidence 34566666766666799999999999999888888887777766
No 53
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=41.33 E-value=46 Score=23.06 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN 85 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~ 85 (183)
..++-+++..++-.||.+++..+|...|..+....+..+++.+.
T Consensus 99 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d 142 (161)
T 3fwb_A 99 KRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFD 142 (161)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 45566667666667999999999999999998888888887773
No 54
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=40.47 E-value=59 Score=22.05 Aligned_cols=42 Identities=14% Similarity=0.279 Sum_probs=33.2
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKE 83 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFaka 83 (183)
..++-+++..++-.||.+++..++...|..+....+..+++.
T Consensus 88 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~ 129 (149)
T 2mys_C 88 VEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG 129 (149)
T ss_pred HHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh
Confidence 356667776666679999999999999988888777766665
No 55
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=40.37 E-value=68 Score=22.02 Aligned_cols=54 Identities=6% Similarity=-0.010 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCC-CCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-CCHHHHHH
Q psy2830 41 YVAAYLLAALGG-KENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgG-n~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-KdI~ELIa 94 (183)
+-.++-+++..+ +-.||.+++..+|.+.|..+....+..+++.+.. .+..+.+.
T Consensus 16 l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~i~~~eF~~ 71 (146)
T 2qac_A 16 ESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDNLTYEQYLE 71 (146)
T ss_dssp HHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSEECHHHHHH
T ss_pred HHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCHHHHHH
Confidence 345566667655 5579999999999999998888888877777754 66777765
No 56
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=39.27 E-value=59 Score=22.98 Aligned_cols=55 Identities=16% Similarity=0.162 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCC-CcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGI-ESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGv-eVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
.+..++-+++..++-.|+.+++..++...|. .+....+..+++.+. | .+..|.+.
T Consensus 41 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~ 101 (135)
T 3h4s_E 41 ELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCV 101 (135)
T ss_dssp HHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHHHHHCSSCSSSBCHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 3456777888777778999999999999996 888888888888774 2 46777775
No 57
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=38.25 E-value=47 Score=22.59 Aligned_cols=43 Identities=12% Similarity=0.096 Sum_probs=33.8
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN 85 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~ 85 (183)
.++-.++..++-.||.+++..++...|..+....+..+++.+.
T Consensus 83 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d 125 (142)
T 2bl0_C 83 QAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE 125 (142)
T ss_dssp HHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC
T ss_pred HHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC
Confidence 4555666666667999999999999998888888887777764
No 58
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=37.24 E-value=18 Score=21.98 Aligned_cols=40 Identities=13% Similarity=0.283 Sum_probs=23.0
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 45 YLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 45 ylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
+-+++..++-.||.+++..++...|..+....+..+++.+
T Consensus 12 F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~ 51 (71)
T 2b1u_A 12 FRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREA 51 (71)
T ss_dssp HTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHC
T ss_pred HHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 3334444444566677777777666666665555555544
No 59
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=37.17 E-value=28 Score=21.43 Aligned_cols=44 Identities=14% Similarity=0.284 Sum_probs=31.7
Q ss_pred HHHHHHHH-HhCCC-CCCCHHHHHHHHHHcCCCc--CHHHHHHHHHHh
Q psy2830 41 YVAAYLLA-ALGGK-ENPAQGDVEKILSSVGIES--DAEKLKIVLKEL 84 (183)
Q Consensus 41 ylAAylL~-~lgGn-~spTaedI~kVLkAaGveV--e~~~~~lFakaL 84 (183)
...++-++ +..++ -.|+.+++..+|...|..+ ....+..+++.+
T Consensus 7 l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~ 54 (76)
T 1qx2_A 7 IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEV 54 (76)
T ss_dssp HHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHH
T ss_pred HHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHh
Confidence 34566666 76665 5699999999999998777 555566565555
No 60
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=36.75 E-value=67 Score=22.14 Aligned_cols=55 Identities=9% Similarity=0.190 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++..++-+++..++-.||.+++..+|...|.......+..+++.+.. .++.|.+.
T Consensus 24 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~ 83 (161)
T 3fwb_A 24 EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYI 83 (161)
T ss_dssp HHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHH
Confidence 45566667777666679999999999999998888888877777622 45667664
No 61
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=36.50 E-value=25 Score=22.16 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=28.8
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHcC-CCcCHHHHHHHHHHh
Q psy2830 44 AYLLAALGGKENPAQGDVEKILSSVG-IESDAEKLKIVLKEL 84 (183)
Q Consensus 44 AylL~~lgGn~spTaedI~kVLkAaG-veVe~~~~~lFakaL 84 (183)
++-+++..++-.|+.+++..+|...| ..+....+..+++.+
T Consensus 13 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~ 54 (81)
T 1c7v_A 13 AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEA 54 (81)
T ss_dssp HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHH
T ss_pred HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHh
Confidence 56666655555678888888888877 777777676666666
No 62
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=35.85 E-value=31 Score=20.60 Aligned_cols=50 Identities=12% Similarity=0.239 Sum_probs=33.2
Q ss_pred HHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC-----CCCHHHHHH
Q psy2830 45 YLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN-----GKNLEEIIA 94 (183)
Q Consensus 45 ylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~-----GKdI~ELIa 94 (183)
+-+++..++-.+|.+++..+++..|..+....+..+.+.+. ..+..|++.
T Consensus 6 F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~ 60 (66)
T 3li6_A 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60 (66)
T ss_dssp HHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHH
T ss_pred HHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 44556656667889999999888887666666666666652 144555553
No 63
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=35.52 E-value=77 Score=22.27 Aligned_cols=53 Identities=17% Similarity=0.218 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
..++-+++..++-.||.+++..+|...|..+....+..+++.+.. .++.|.+.
T Consensus 98 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~ 155 (166)
T 2mys_B 98 MGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICY 155 (166)
T ss_pred HHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHH
Confidence 346667777667779999999999999988888877777776632 34556654
No 64
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=35.47 E-value=86 Score=21.66 Aligned_cols=55 Identities=18% Similarity=0.430 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhCC-CCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGG-KENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgG-n~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++..++-.++..+ +-.||.+++..+|...|..+....+..+.+.+.. .+..|.+.
T Consensus 19 ~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~ 79 (161)
T 1dtl_A 19 EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79 (161)
T ss_dssp HHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 4455666777666 5679999999999999998888888877777732 56677765
No 65
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=35.39 E-value=45 Score=23.36 Aligned_cols=54 Identities=11% Similarity=0.329 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHH--HhC----C-CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLK--ELN----G-KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFak--aL~----G-KdI~ELIa 94 (183)
...++-+++..++-.||.+++..+|...|..+....+..+++ .+. | .++.|.+.
T Consensus 87 l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 147 (159)
T 2ovk_C 87 FMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMK 147 (159)
T ss_dssp HHHHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHH
Confidence 345677777766667999999999999999998888888887 442 2 35667664
No 66
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=35.07 E-value=92 Score=21.44 Aligned_cols=52 Identities=13% Similarity=0.281 Sum_probs=39.0
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
.++-+++..++-.||.+++..++...|..+....+..+++.+. | .+..|.+.
T Consensus 100 ~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~ 156 (162)
T 1top_A 100 NCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156 (162)
T ss_dssp HHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 4556666666667999999999999998888888887777772 1 45566553
No 67
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=34.94 E-value=60 Score=22.03 Aligned_cols=42 Identities=12% Similarity=0.215 Sum_probs=24.7
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
.++-.++..++-.||.+++..+|...|..+....+..+.+.+
T Consensus 10 ~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~ 51 (142)
T 2bl0_C 10 EAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEA 51 (142)
T ss_dssp HHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHh
Confidence 444455554444566666666666666666665555555554
No 68
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=34.78 E-value=36 Score=24.91 Aligned_cols=45 Identities=18% Similarity=0.226 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
....|+-+.+..|+-.||.++++.+|...|..+....+..+++.+
T Consensus 86 ~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~ 130 (153)
T 3i5g_B 86 ALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDA 130 (153)
T ss_dssp HHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTC
T ss_pred HHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHh
Confidence 356788888887777899999999999999988888777776655
No 69
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=34.61 E-value=67 Score=21.14 Aligned_cols=45 Identities=9% Similarity=0.083 Sum_probs=35.7
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHc---CCCcCHHHHHHHHHHh
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSV---GIESDAEKLKIVLKEL 84 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAa---GveVe~~~~~lFakaL 84 (183)
....++-+++..++-.|+.+++..++... |..+....+..+++.+
T Consensus 42 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~ 89 (109)
T 1rwy_A 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAG 89 (109)
T ss_dssp HHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Confidence 34466777787777779999999999999 7778887777777776
No 70
>2dhy_A CUE domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.61 E-value=65 Score=22.01 Aligned_cols=52 Identities=15% Similarity=0.095 Sum_probs=37.0
Q ss_pred CCCCCcccccchhhhhhHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHH
Q psy2830 23 TSNPGLQSQAGGYLRIMRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVL 81 (183)
Q Consensus 23 ~~~~~~~~q~~~~~~~M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFa 81 (183)
+|+|.-...+.+|-..+.+ |..+- -.+..+-|++||.+.|..|+...-.++-
T Consensus 6 ~~~~~~~~~~~~~~~~v~~-----L~~MF--P~lD~~vI~~vL~a~~G~vd~aId~LL~ 57 (67)
T 2dhy_A 6 SGRPARQVRRLEFNQAMDD-----FKTMF--PNMDYDIIECVLRANSGAVDATIDQLLQ 57 (67)
T ss_dssp CCCCCCCCCCCCSHHHHHH-----HHHHC--SSSCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCCcchhccCCCHHHHHHH-----HHHHC--CCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 5677767777777543444 34445 4589999999999999999987655443
No 71
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=34.55 E-value=1e+02 Score=20.48 Aligned_cols=55 Identities=15% Similarity=0.334 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhC-C-CCCCCHHHHHHHHHH-----cCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAALG-G-KENPAQGDVEKILSS-----VGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lg-G-n~spTaedI~kVLkA-----aGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
....++-..+-+ | +-.||.++++.+|+. .|.......+..+++.+. | .++.|.+.
T Consensus 10 ~l~~~F~~~D~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~ 76 (92)
T 3rm1_A 10 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMA 76 (92)
T ss_dssp HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHH
T ss_pred HHHHHHHHHccCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHH
Confidence 455666666622 1 227999999999999 888888888888888773 1 46666653
No 72
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=32.81 E-value=58 Score=20.65 Aligned_cols=55 Identities=13% Similarity=0.324 Sum_probs=39.8
Q ss_pred HHHHHHHHHHh-CCCC-CCCHHHHHHHHHH---cCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAAL-GGKE-NPAQGDVEKILSS---VGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~l-gGn~-spTaedI~kVLkA---aGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
+...++-+.+. .++- .|+.+++..++.. .|..+....+..+++.+. | .+..|.+.
T Consensus 11 ~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~ 75 (90)
T 1k8u_A 11 LLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVT 75 (90)
T ss_dssp HHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHH
T ss_pred HHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence 45567777783 6666 7999999999998 888877777777777662 2 45566653
No 73
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=32.79 E-value=71 Score=21.09 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHc---CCCcCHHHHHHHHHHhCC-----CCHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSV---GIESDAEKLKIVLKELNG-----KNLEEII 93 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAa---GveVe~~~~~lFakaL~G-----KdI~ELI 93 (183)
....++-+++..++-.|+.+++..+|... |..+....+..+++.+.. .+.+|.+
T Consensus 43 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~ 104 (109)
T 1bu3_A 43 DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWA 104 (109)
T ss_dssp HHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCCHHHHHHHHHHHCTTCSSEECHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 34567777787777789999999999999 777888888777777631 3455555
No 74
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=32.63 E-value=62 Score=21.33 Aligned_cols=54 Identities=9% Similarity=0.095 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHc---CCCcCHHHHHHHHHHhCC-----CCHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSV---GIESDAEKLKIVLKELNG-----KNLEEII 93 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAa---GveVe~~~~~lFakaL~G-----KdI~ELI 93 (183)
....++-+++..++-.|+.+++..++... |..+....+..+++.+.. .+..|.+
T Consensus 42 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~ 103 (108)
T 2pvb_A 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFA 103 (108)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHH
Confidence 34567777787777789999999999999 778888887777777631 3555554
No 75
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=32.51 E-value=1.1e+02 Score=20.54 Aligned_cols=55 Identities=7% Similarity=0.110 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh-----CCCCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL-----NGKNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL-----~GKdI~ELIa 94 (183)
+...++-.++..++-.||.+++..+|...|.......+..+.+.+ ...+..|.+.
T Consensus 12 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~ 71 (153)
T 3ox6_A 12 ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71 (153)
T ss_dssp HHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHH
Confidence 344555566665666799999999999999988887777777665 1256777775
No 76
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=32.22 E-value=73 Score=22.02 Aligned_cols=53 Identities=21% Similarity=0.350 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
..++-+++..++-.||.+++..++...|..+....+..+++.+. | .++.|.+.
T Consensus 94 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 151 (158)
T 2jnf_A 94 REAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 151 (158)
T ss_dssp HHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHH
T ss_pred HHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 45566677666667999999999999999888888887777772 1 44556553
No 77
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=31.99 E-value=87 Score=21.66 Aligned_cols=44 Identities=16% Similarity=0.348 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
+-.++.+++..++-.|+.+++..+|++.|..+....+..+++.+
T Consensus 12 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~ 55 (148)
T 1exr_A 12 FKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV 55 (148)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 34455666665556688888888888888777666666555555
No 78
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=31.95 E-value=73 Score=22.73 Aligned_cols=45 Identities=4% Similarity=0.148 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHH-----HHHHHcCCCcCHH-----HHHHHHHHh
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVE-----KILSSVGIESDAE-----KLKIVLKEL 84 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~-----kVLkAaGveVe~~-----~~~lFakaL 84 (183)
++-.++-+++..++-.||.+++. .++...|...... .+..+++.+
T Consensus 17 ~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~ 71 (191)
T 1uhk_A 17 RHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGA 71 (191)
T ss_dssp HHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHh
Confidence 44556667777667778999998 7888888877665 455555555
No 79
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=31.91 E-value=67 Score=21.18 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHc---CCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSV---GIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAa---GveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
...++-+++..++-.|+.+++..+|... |..+....+..+++.+.. .+..|.+.
T Consensus 44 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~ 105 (110)
T 1pva_A 44 VKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFET 105 (110)
T ss_dssp HHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 4467777887777789999999999999 777888778777777631 45566553
No 80
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=31.88 E-value=77 Score=21.39 Aligned_cols=55 Identities=13% Similarity=0.328 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++..++-.++..++-.+|.+++..+|...|..+....+..+.+.+.. .+..|.+.
T Consensus 12 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~ 71 (147)
T 4ds7_A 12 EFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLA 71 (147)
T ss_dssp HHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHH
Confidence 34455556666555568888888888888887777777766666621 34556554
No 81
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=31.76 E-value=95 Score=21.50 Aligned_cols=55 Identities=20% Similarity=0.328 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-KdI~ELIa 94 (183)
.+..++-+++..++-.||.+++..+|...|..+....+..+++.-.| .+..+.+.
T Consensus 19 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~g~i~~~eF~~ 74 (156)
T 1wdc_B 19 EMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLS 74 (156)
T ss_dssp HHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHTTSSSCCCHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHhCCCcCcHHHHHH
Confidence 44556667777666679999999999999988877766665553333 56666664
No 82
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=31.65 E-value=80 Score=22.42 Aligned_cols=43 Identities=9% Similarity=0.214 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
..++-+++..++-.||.+++..++...|..+.+..+..+++.+
T Consensus 75 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~ 117 (167)
T 1gjy_A 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY 117 (167)
T ss_dssp HHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT
T ss_pred HHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 3456667766667799999999999999988888877777766
No 83
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=31.26 E-value=88 Score=22.73 Aligned_cols=53 Identities=21% Similarity=0.313 Sum_probs=39.5
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-CCHHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-KNLEEIIA 94 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-KdI~ELIa 94 (183)
--++-+++..|+-.||.+++..+|.+.|..+.......+.....+ .+..+.+.
T Consensus 19 k~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~~~~i~f~ef~~ 72 (153)
T 3i5g_B 19 KEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAFLT 72 (153)
T ss_dssp HHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHHTSSSCCCSHHHHH
T ss_pred HHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHHhccCCccHHHHHH
Confidence 356778887777789999999999999998888777766655433 44555554
No 84
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=30.89 E-value=96 Score=21.65 Aligned_cols=55 Identities=18% Similarity=0.355 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++..++-.++..++-.||.+++..+|...|..+....+..+.+.+.. .+..|.+.
T Consensus 29 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~ 88 (169)
T 3qrx_A 29 EIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88 (169)
T ss_dssp HHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHH
Confidence 45566777777666779999999999999998888888877777721 45667664
No 85
>3kz3_A Repressor protein CI; five helix bundle, DNA-binding, transcription, transcription regulation; 1.64A {Enterobacteria phage lambda}
Probab=30.34 E-value=47 Score=21.45 Aligned_cols=30 Identities=7% Similarity=0.031 Sum_probs=23.7
Q ss_pred CCCCCCCHHHHHHHHHHcCCCcCHHHHHHH
Q psy2830 51 GGKENPAQGDVEKILSSVGIESDAEKLKIV 80 (183)
Q Consensus 51 gGn~spTaedI~kVLkAaGveVe~~~~~lF 80 (183)
.|+..|+.+.+.+|.+..|+.++...+.+.
T Consensus 47 ~g~~~~~~~~~~~ia~~l~v~~~~l~~~l~ 76 (80)
T 3kz3_A 47 NGINALNAYNAALLAKILKVSVEEFSPSIA 76 (80)
T ss_dssp TTSSCCCHHHHHHHHHHHTSCGGGTCHHHH
T ss_pred cCCCCCCHHHHHHHHHHhCCCHHHHhHHHH
Confidence 356678999999999999998887665543
No 86
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=30.18 E-value=71 Score=21.07 Aligned_cols=44 Identities=7% Similarity=-0.011 Sum_probs=35.7
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHc---CCCcCHHHHHHHHHHh
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSV---GIESDAEKLKIVLKEL 84 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAa---GveVe~~~~~lFakaL 84 (183)
...++-+++..++-.|+.+++..++... |..+....+..+++.+
T Consensus 44 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (109)
T 3fs7_A 44 IKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAG 90 (109)
T ss_dssp HHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCCHHHHHHHHHHh
Confidence 4456777787777789999999999999 7888888887777766
No 87
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=30.17 E-value=73 Score=22.03 Aligned_cols=56 Identities=14% Similarity=0.275 Sum_probs=41.4
Q ss_pred HHHHHHHHHH-hCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC----C-CCHHHHHHh
Q psy2830 40 RYVAAYLLAA-LGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN----G-KNLEEIIAA 95 (183)
Q Consensus 40 ~ylAAylL~~-lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~----G-KdI~ELIa~ 95 (183)
++..++-.++ ..++-.||.+++..+|...|..+....+..+++.+. | .+..|.+..
T Consensus 14 ~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~ 75 (158)
T 2jnf_A 14 LLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKII 75 (158)
T ss_dssp HHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 4445666667 666667999999999999998888887887777763 1 567777753
No 88
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=30.01 E-value=50 Score=22.38 Aligned_cols=55 Identities=16% Similarity=0.336 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
....++-.++..++-.||.+++..+|...|..+....+..+++.+. | .++.|.+.
T Consensus 77 ~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~ 136 (145)
T 2bl0_B 77 EMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVD 136 (145)
T ss_dssp HHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHH
Confidence 4455666777666667999999999999999888888887777763 1 34556554
No 89
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=29.99 E-value=1.4e+02 Score=21.14 Aligned_cols=54 Identities=15% Similarity=0.345 Sum_probs=36.2
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC-----CCCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN-----GKNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~-----GKdI~ELIa 94 (183)
+..++-.++..++-.||.+++..+|...|..+....+..+++.+. ..+..|.+.
T Consensus 13 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~ 71 (179)
T 2f2o_A 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71 (179)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHH
Confidence 344555666655666888888888888888777777776666662 245666654
No 90
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=29.83 E-value=87 Score=20.62 Aligned_cols=44 Identities=9% Similarity=0.113 Sum_probs=34.9
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHc---CCCcCHHHHHHHHHHh
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSV---GIESDAEKLKIVLKEL 84 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAa---GveVe~~~~~lFakaL 84 (183)
...++-+++..++-.|+.+++..+|... |..+....+..+++.+
T Consensus 43 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~ 89 (109)
T 5pal_A 43 VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAG 89 (109)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 3456667777677779999999999998 8888888777777766
No 91
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=29.77 E-value=58 Score=23.54 Aligned_cols=55 Identities=9% Similarity=0.275 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC-----CCCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN-----GKNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~-----GKdI~ELIa 94 (183)
++..++-+++..++-.|+.+++..+|...|..+....+..+++.+. ..++.|.+.
T Consensus 51 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~ 110 (150)
T 2jjz_A 51 AFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVN 110 (150)
T ss_dssp HHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHH
T ss_pred HHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHH
Confidence 4456666777766667999999999999999888877777776662 146666664
No 92
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=29.53 E-value=50 Score=22.24 Aligned_cols=55 Identities=15% Similarity=0.310 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
.+-.++-+++..++-.|+.+++..+|...|..+....+..+++.+. | .++.+.+.
T Consensus 33 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~ 92 (107)
T 2d58_A 33 GFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92 (107)
T ss_dssp HHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 3445566667666667999999999999998888887777777763 1 45666664
No 93
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=29.46 E-value=62 Score=22.51 Aligned_cols=53 Identities=13% Similarity=0.233 Sum_probs=38.4
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC---C-CCHHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN---G-KNLEEIIA 94 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~---G-KdI~ELIa 94 (183)
..++-+++..++-.||.+++..+|...|..+....+..+++.+. | .++.|.+.
T Consensus 90 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~dg~i~~~eF~~ 146 (156)
T 1wdc_B 90 RNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVEGGKFDYVKFTA 146 (156)
T ss_dssp HHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEETTEECHHHHHH
T ss_pred HHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCCCCEEeHHHHHH
Confidence 34555566666667999999999999998888888887777763 2 45666654
No 94
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=29.33 E-value=37 Score=23.19 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
..++-.++..++-.||.+++..+|...|..+....+..+++.+.. .++.|.+.
T Consensus 79 ~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 136 (143)
T 3j04_B 79 RNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTR 136 (143)
T ss_dssp HHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHH
T ss_pred HHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHH
Confidence 345555666666679999999999999999888888888877731 44555553
No 95
>1dk0_A HASA, heme-binding protein A; protein-heme complex, two heme insertions, transport protein; HET: HEM; 1.77A {Serratia marcescens} SCOP: d.35.1.1 PDB: 1b2v_A* 1dkh_A* 3csl_C* 3csn_C 3ddr_C* 2uyd_X* 1ybj_A 2cn4_A*
Probab=29.13 E-value=25 Score=28.93 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=43.4
Q ss_pred chhhhhhhhhccCCCCCcccc------------c--chhhhhhHHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHH
Q psy2830 11 NAEVYFGLILIPTSNPGLQSQ------------A--GGYLRIMRYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEK 76 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~q------------~--~~~~~~M~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~ 76 (183)
.+.|.||+-|++-++.+++-| - ++-+.--....-|=|.. ||.+|-.+-++.+|++-||+|+--.
T Consensus 89 ldsL~fG~~L~~~~~~~~qL~~~ql~fsGLdI~~d~d~n~qG~~h~~iYgLmr--Gn~~plLeiL~~~l~a~GIdVntpl 166 (188)
T 1dk0_A 89 LDSLSFGDGLSGGDTSPYSIQVPDVSFGGLNLSSLQAQGHDGVVHQVVYGLMS--GDTGALETALNGILDDYGLSVNSTF 166 (188)
T ss_dssp EEEEEEEEEEECCSSSCCEEEEEEEEEECCCEEECGGGGGGSHHHHHHHHHHT--TCCHHHHHHHHHHHGGGTCCTTSBH
T ss_pred eeeEeccccccCCCCccceeeeeEEEecCCccccccccCCCCcccceeeeccc--CChHHHHHHHHhhhhcCCcccCCcH
Confidence 456999999997654322111 1 11111234566677767 8988888888889999999998654
Q ss_pred HHH
Q psy2830 77 LKI 79 (183)
Q Consensus 77 ~~l 79 (183)
=++
T Consensus 167 kDm 169 (188)
T 1dk0_A 167 DQV 169 (188)
T ss_dssp HHH
T ss_pred Hhh
Confidence 443
No 96
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=28.55 E-value=92 Score=22.22 Aligned_cols=52 Identities=8% Similarity=0.237 Sum_probs=38.8
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC----CCHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG----KNLEEII 93 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G----KdI~ELI 93 (183)
..++-+++..++-.|+.+++..++...|..+....+..+++.+.. .+..|.+
T Consensus 80 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~dd~dg~i~~~eF~ 135 (173)
T 1alv_A 80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFI 135 (173)
T ss_dssp HHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHH
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCcCcHHHHH
Confidence 346666776667789999999999999999888887777776632 3455555
No 97
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=28.44 E-value=1.2e+02 Score=21.08 Aligned_cols=55 Identities=11% Similarity=0.139 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC-----CCCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN-----GKNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~-----GKdI~ELIa 94 (183)
++...+-.++..++-.||.+++..++...|..+....+..+++.+. ..+..|.+.
T Consensus 28 ~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 87 (166)
T 2aao_A 28 GLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIA 87 (166)
T ss_dssp HHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 3445666677766777999999999999999888877777777763 146677764
No 98
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=28.29 E-value=75 Score=23.42 Aligned_cols=52 Identities=12% Similarity=0.254 Sum_probs=37.6
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC---CCHHHHHH
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG---KNLEEIIA 94 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G---KdI~ELIa 94 (183)
.++-+++..++-.||.+++..+|...|..+....+..+++.+.+ .+..|.+.
T Consensus 107 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~d~dg~i~~~eF~~ 161 (198)
T 1juo_A 107 QHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGKITFDDYIA 161 (198)
T ss_dssp HHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTCSSSSEEHHHHHH
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCeEcHHHHHH
Confidence 34555566666679999999999999999888888877776621 34455553
No 99
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=27.70 E-value=1.1e+02 Score=20.89 Aligned_cols=53 Identities=17% Similarity=0.179 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC--C---CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN--G---KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~--G---KdI~ELIa 94 (183)
+|..+|-+++..|+-.||.+++..+++..|+. ...+..+.+.+. | .+..|.+.
T Consensus 12 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~--~~~l~~i~~~~D~d~dG~i~~~EF~~ 69 (99)
T 1qjt_A 12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLP--DLILGKIWDLADTDGKGVLSKQEFFV 69 (99)
T ss_dssp HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSC--HHHHHHHHHHHCCSSSSSCCSHHHHH
T ss_pred HHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHHHCCCCCCcCCHHHHHH
Confidence 55677888887776779999999999998853 445565555553 2 56777664
No 100
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=27.49 E-value=84 Score=23.46 Aligned_cols=49 Identities=14% Similarity=0.252 Sum_probs=34.9
Q ss_pred HHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh--CCCCHHHHHHh
Q psy2830 47 LAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL--NGKNLEEIIAA 95 (183)
Q Consensus 47 L~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL--~GKdI~ELIa~ 95 (183)
|..--|...+|+++|+.-+...|+++++..++..+..+ -+.+-.++..+
T Consensus 17 ~~~~~~~~~Vsae~L~eEfdefGi~~~d~VldKc~ELC~~y~lda~e~Vee 67 (101)
T 2keb_A 17 LFQGPGSMSASAQQLAEELQIFGLDCEEALIEKLVELCVQYGQNEEGMVGE 67 (101)
T ss_dssp -------CCCCHHHHHHHHHHHTCBCCHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred eeeCCchhhccHHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 34444678899999999999999999999999888776 34555566654
No 101
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=27.08 E-value=1.3e+02 Score=22.06 Aligned_cols=54 Identities=9% Similarity=0.254 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
...++-.++..++-.|+.+++..++...|..+....+..+++.+.. .+..|.+.
T Consensus 95 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 153 (191)
T 1y1x_A 95 MREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVE 153 (191)
T ss_dssp HHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 3456667777677789999999999999999888888888777732 45667664
No 102
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=27.07 E-value=1.2e+02 Score=21.31 Aligned_cols=13 Identities=0% Similarity=0.003 Sum_probs=6.7
Q ss_pred CCHHHHHHHHHHc
Q psy2830 56 PAQGDVEKILSSV 68 (183)
Q Consensus 56 pTaedI~kVLkAa 68 (183)
++.+.+..+++..
T Consensus 37 ~~~~~~~~l~~~~ 49 (165)
T 1k94_A 37 FSLETCRIMIAML 49 (165)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHh
Confidence 4555555555544
No 103
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=26.90 E-value=1.2e+02 Score=21.79 Aligned_cols=55 Identities=13% Similarity=0.338 Sum_probs=40.4
Q ss_pred HHHHHHHHHH-hCCCC-CCCHHHHHHHHHH-----cCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAA-LGGKE-NPAQGDVEKILSS-----VGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~-lgGn~-spTaedI~kVLkA-----aGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
.+..||-+++ ..|+- .||.++++.+|.. .|..+....+..+++.+. | .++.|.+.
T Consensus 23 ~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~ 89 (113)
T 2lnk_A 23 VMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCV 89 (113)
T ss_dssp HHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHH
T ss_pred HHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 5667888887 44543 6999999999987 666677777777777773 2 57778764
No 104
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=26.84 E-value=85 Score=22.26 Aligned_cols=24 Identities=17% Similarity=0.347 Sum_probs=12.1
Q ss_pred HHHhCCCCCCCHHHHHHHHHHcCC
Q psy2830 47 LAALGGKENPAQGDVEKILSSVGI 70 (183)
Q Consensus 47 L~~lgGn~spTaedI~kVLkAaGv 70 (183)
.++..++-.||.+++..++...|.
T Consensus 9 ~~D~d~~G~i~~~el~~~l~~lg~ 32 (167)
T 1gjy_A 9 ASVAGQDGQIDADELQRCLTQSGI 32 (167)
T ss_dssp HHHCCTTSCBCHHHHHHHHHHHTC
T ss_pred HHHcCCCCcCCHHHHHHHHHhhcc
Confidence 344444444555555555555554
No 105
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=26.80 E-value=1.1e+02 Score=22.37 Aligned_cols=55 Identities=16% Similarity=0.297 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHc-CCCcCHHHHHHHHHH----hC----C-CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSV-GIESDAEKLKIVLKE----LN----G-KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAa-GveVe~~~~~lFaka----L~----G-KdI~ELIa 94 (183)
....++-+++..++-.||.+++..+|... |..+....+..+++. +. | .++.|.+.
T Consensus 115 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~ 179 (202)
T 2bec_A 115 KLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTK 179 (202)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHH
Confidence 34567778887777789999999999999 998888888877776 52 2 56778775
No 106
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=26.78 E-value=1e+02 Score=20.57 Aligned_cols=43 Identities=14% Similarity=0.143 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
+|..++-+++..++-.||.+++..++...|.. ...+..+.+.+
T Consensus 11 ~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~--~~~~~~i~~~~ 53 (95)
T 1c07_A 11 KYDEIFLKTDKDMDGFVSGLEVREIFLKTGLP--STLLAHIWSLC 53 (95)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHTTTCC--HHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCC--HHHHHHHHHHH
Confidence 45667778887666679999999999988754 44455555544
No 107
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=26.49 E-value=99 Score=23.30 Aligned_cols=40 Identities=23% Similarity=0.236 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHHcCC-C---cCHHHHHHHHHHhCCCCHHHHHH
Q psy2830 55 NPAQGDVEKILSSVGI-E---SDAEKLKIVLKELNGKNLEEIIA 94 (183)
Q Consensus 55 spTaedI~kVLkAaGv-e---Ve~~~~~lFakaL~GKdI~ELIa 94 (183)
.++.+.+..||.||+- + +-......+++.++||+.+++-.
T Consensus 93 ~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~ 136 (159)
T 2ast_A 93 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRK 136 (159)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 5788999999999973 3 44555667888899999998775
No 108
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=26.47 E-value=67 Score=23.89 Aligned_cols=43 Identities=12% Similarity=0.319 Sum_probs=30.9
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
-.++-+++..++-.|+.+++..+|.+.|..+....+..+...+
T Consensus 14 k~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~ 56 (176)
T 2lhi_A 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEI 56 (176)
T ss_dssp HHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTT
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHh
Confidence 3566667766666788888888888888887777766665554
No 109
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=26.32 E-value=1.1e+02 Score=21.63 Aligned_cols=52 Identities=17% Similarity=0.390 Sum_probs=39.6
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC----C-CCHHHHHH
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN----G-KNLEEIIA 94 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~----G-KdI~ELIa 94 (183)
.++-.++..++-.||.+++..++...|..+....+..+++.+. | .+..|.+.
T Consensus 88 ~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~ 144 (179)
T 2f2o_A 88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 144 (179)
T ss_dssp HHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHH
Confidence 4556666666667999999999999999998888888888873 2 56778876
No 110
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=26.27 E-value=1.4e+02 Score=21.99 Aligned_cols=53 Identities=8% Similarity=0.086 Sum_probs=38.7
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHHhh
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIAAG 96 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa~G 96 (183)
-.++-+++..++-.||.+++..++...| +.+..+..+++.+.. .+..|.+..-
T Consensus 131 ~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~ 188 (208)
T 2hpk_A 131 NSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTELVHLF 188 (208)
T ss_dssp HHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHCTTCCSSBCHHHHHHHH
T ss_pred HHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 3466677777777899999999999999 555566666666631 5677877643
No 111
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=26.22 E-value=1.3e+02 Score=21.39 Aligned_cols=53 Identities=9% Similarity=0.202 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 42 VAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 42 lAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
..++-+++..++-.||.+++..++...|..+....+..+++.+.. .+..|.+.
T Consensus 77 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~ 134 (172)
T 2znd_A 77 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 134 (172)
T ss_dssp HHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred HHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 346667776667779999999999999998888888777776632 34555553
No 112
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=26.16 E-value=1.1e+02 Score=23.47 Aligned_cols=54 Identities=11% Similarity=0.117 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC----CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG----KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G----KdI~ELIa 94 (183)
...++-.++..++-.||.+++..+++..|..+.+..+..+++.+.. .+.+|.+.
T Consensus 119 l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~dd~dg~I~~~eF~~ 176 (220)
T 3sjs_A 119 AYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAFCDLNCWIA 176 (220)
T ss_dssp HHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC--CCSEEHHHHHH
T ss_pred HHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCcCcHHHHHH
Confidence 3455667777666779999999999999999999888888887752 34555553
No 113
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=25.94 E-value=57 Score=23.56 Aligned_cols=55 Identities=15% Similarity=0.346 Sum_probs=40.9
Q ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
++-.++-+++..++-.|+.+++..+|...|..+....+..+++.+.. .+..|.+.
T Consensus 49 ~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~ 108 (147)
T 1wy9_A 49 AFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLR 108 (147)
T ss_dssp HHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence 44556667776666679999999999999998888888777776631 45666664
No 114
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=24.06 E-value=1.7e+02 Score=19.86 Aligned_cols=55 Identities=11% Similarity=0.355 Sum_probs=38.2
Q ss_pred HHHHHHHHHH-hCCCC-CCCHHHHHHHHHH-----cCCCcCHHHHHHHHHHhCC-----CCHHHHHH
Q psy2830 40 RYVAAYLLAA-LGGKE-NPAQGDVEKILSS-----VGIESDAEKLKIVLKELNG-----KNLEEIIA 94 (183)
Q Consensus 40 ~ylAAylL~~-lgGn~-spTaedI~kVLkA-----aGveVe~~~~~lFakaL~G-----KdI~ELIa 94 (183)
.+..|+-+++ ..|+- .||.++++.+|.. .|..+....+..+++.+.. .++.|.+.
T Consensus 11 ~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~ 77 (99)
T 2y5i_A 11 ALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVV 77 (99)
T ss_dssp HHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHH
T ss_pred HHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHH
Confidence 3456777776 44433 6999999999987 5667777778877777731 45677664
No 115
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=23.45 E-value=1.6e+02 Score=20.03 Aligned_cols=54 Identities=19% Similarity=0.315 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHH-cCCCcCHHHHHHHHHH----hC----C-CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSS-VGIESDAEKLKIVLKE----LN----G-KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkA-aGveVe~~~~~lFaka----L~----G-KdI~ELIa 94 (183)
...++-+++..++-.||.+++..++.. .|..+....+..+++. +. | .+++|.+.
T Consensus 77 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~ 140 (155)
T 3ll8_B 77 LRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCA 140 (155)
T ss_dssp HHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 445666777777778999999999999 6988888888777776 42 2 56677764
No 116
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=22.85 E-value=84 Score=23.54 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHc----CCCcCHHHHHHHHHHhCC----CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSV----GIESDAEKLKIVLKELNG----KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAa----GveVe~~~~~lFakaL~G----KdI~ELIa 94 (183)
+..|+-+++ .++-.|+.+++..+|+.. |..+....+..+++.+.. .+..|.+.
T Consensus 78 l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~dd~dG~I~~~EF~~ 138 (174)
T 2i7a_A 78 YQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYSDSVGRVSFPSLVC 138 (174)
T ss_dssp HHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHSCTTSEECHHHHHH
T ss_pred HHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHcCCCCeEcHHHHHH
Confidence 346778888 777789999999999999 998888877777766642 34555553
No 117
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=22.80 E-value=53 Score=22.51 Aligned_cols=42 Identities=17% Similarity=0.281 Sum_probs=30.8
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHh
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKEL 84 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL 84 (183)
.++-+++..++-.||.+++..++...|..+....+..+++.+
T Consensus 87 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~ 128 (148)
T 1m45_A 87 KAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGV 128 (148)
T ss_dssp HHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTC
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh
Confidence 445555555555689999999999998888777777766655
No 118
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=22.30 E-value=76 Score=21.97 Aligned_cols=52 Identities=15% Similarity=0.278 Sum_probs=36.9
Q ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHH--hCC-----CCHHHHHH
Q psy2830 43 AAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKE--LNG-----KNLEEIIA 94 (183)
Q Consensus 43 AAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFaka--L~G-----KdI~ELIa 94 (183)
.++-+++..++-.||.+++..+|...|..+....+..+++. +.. .++.|.+.
T Consensus 88 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~ 146 (156)
T 1wdc_C 88 EAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVK 146 (156)
T ss_dssp HHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHH
Confidence 34555555555679999999999999988888888877777 521 34566654
No 119
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=22.26 E-value=1.5e+02 Score=21.49 Aligned_cols=54 Identities=15% Similarity=0.216 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC-----CCCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN-----GKNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~-----GKdI~ELIa 94 (183)
+..++-.++..++-.+|.+++..+|...|..+....+..+.+.+. ..+..|++.
T Consensus 39 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~ 97 (204)
T 3e3r_A 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLR 97 (204)
T ss_dssp -CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred HHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHH
Confidence 345566677767778999999999999999998888888777773 256777775
No 120
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=21.89 E-value=1.6e+02 Score=21.79 Aligned_cols=39 Identities=23% Similarity=0.245 Sum_probs=26.7
Q ss_pred CCCHHHHHHHHHHcCC-C---cCHHHHHHHHHHhCCCCHHHHH
Q psy2830 55 NPAQGDVEKILSSVGI-E---SDAEKLKIVLKELNGKNLEEII 93 (183)
Q Consensus 55 spTaedI~kVLkAaGv-e---Ve~~~~~lFakaL~GKdI~ELI 93 (183)
.++.+.+-.||.||+- + .-......+++.++||+.+|+=
T Consensus 88 ~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR 130 (141)
T 1fs1_B 88 KVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 130 (141)
T ss_dssp CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHH
Confidence 4667777778877762 3 3344566778888888888854
No 121
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=21.73 E-value=43 Score=23.09 Aligned_cols=42 Identities=14% Similarity=0.300 Sum_probs=32.3
Q ss_pred HHHHHHhCCCCCCCHHHHHHHHHHcCCCcCHHHHHHHHHHhC
Q psy2830 44 AYLLAALGGKENPAQGDVEKILSSVGIESDAEKLKIVLKELN 85 (183)
Q Consensus 44 AylL~~lgGn~spTaedI~kVLkAaGveVe~~~~~lFakaL~ 85 (183)
++-+++..++-.||.+++..++...|..+....+..+++.+.
T Consensus 92 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d 133 (151)
T 1w7j_B 92 GFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE 133 (151)
T ss_dssp HHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc
Confidence 455556555667999999999999998888887777776653
No 122
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=20.32 E-value=91 Score=20.47 Aligned_cols=44 Identities=7% Similarity=0.036 Sum_probs=33.8
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHc---CCCcCHHHHHHHHHHh
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSV---GIESDAEKLKIVLKEL 84 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAa---GveVe~~~~~lFakaL 84 (183)
...++-+++..++-.|+.+++..++... |..+....+..+++.+
T Consensus 43 l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~ 89 (108)
T 1rro_A 43 VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAA 89 (108)
T ss_dssp HHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHh
Confidence 4456777787666679999999999998 6777777777777666
No 123
>2ftc_E L12MT, MRP-L12, 39S ribosomal protein L12, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=20.28 E-value=92 Score=24.20 Aligned_cols=23 Identities=13% Similarity=0.270 Sum_probs=14.0
Q ss_pred HHHHHHhCCCCH---HHHHHhhhhhh
Q psy2830 78 KIVLKELNGKNL---EEIIAAGKEKL 100 (183)
Q Consensus 78 ~lFakaL~GKdI---~ELIa~G~~KL 100 (183)
..++..|++.++ .||+..-.+++
T Consensus 4 ~~ive~i~~LtllE~~eLv~~leekf 29 (137)
T 2ftc_E 4 QQLVQDIASLTLLEISDLNELLKKTL 29 (137)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 445566666665 46666666665
No 124
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=20.00 E-value=1.8e+02 Score=21.51 Aligned_cols=54 Identities=17% Similarity=0.344 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHc-CCCcCHHHHHHH----HHHhC----C-CCHHHHHH
Q psy2830 41 YVAAYLLAALGGKENPAQGDVEKILSSV-GIESDAEKLKIV----LKELN----G-KNLEEIIA 94 (183)
Q Consensus 41 ylAAylL~~lgGn~spTaedI~kVLkAa-GveVe~~~~~lF----akaL~----G-KdI~ELIa 94 (183)
...++-+++..++-.||.+++..+|... |..+.+..+..+ ++.+. | .++.|.+.
T Consensus 115 l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~ 178 (208)
T 2ct9_A 115 LHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK 178 (208)
T ss_dssp HHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHH
T ss_pred HHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 4456777787777789999999999996 988888887766 55552 1 45677765
Done!