BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2832
(362 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48605|TCPG_DROME T-complex protein 1 subunit gamma OS=Drosophila melanogaster
GN=Cctgamma PE=2 SV=2
Length = 544
Score = 492 bits (1267), Expect = e-138, Method: Compositional matrix adjust.
Identities = 245/360 (68%), Positives = 282/360 (78%), Gaps = 52/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
MLMDPMGGIVMTNDGNAILREITVQHPA KSMIEIARTQDEEVGDGTTSVIVLAGEML
Sbjct: 50 MLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAA 109
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE FL Q+HPTVII+AYR ALED+V L++++S LD D++K+ +V+KACVGTKFIGK
Sbjct: 110 AEPFLQQQIHPTVIIRAYREALEDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGK 169
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
WSDLA IALDAV+TVT+ E+GR E+DIKRYAKVEKIPGG IE+SCVL+GVM+NKDVTHP
Sbjct: 170 WSDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHP 229
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
KMRR IENPRIVLLDC+LEYKKGESQTNVEI+ E D
Sbjct: 230 KMRRLIENPRIVLLDCSLEYKKGESQTNVEIIGEQD------------------------ 265
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
FT++LQ +EEE+V+++C DIIA+KPDL+FTEKG
Sbjct: 266 --------------------FTRMLQ--------IEEEFVQRICADIIAVKPDLVFTEKG 297
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
+SDLAQH+LLKA ITAIRR+RK+DN RIARACGATIVNRTEEL E+DVGTGAGLFE+KK+
Sbjct: 298 VSDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKI 357
>sp|P50143|TCPG_XENLA T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2
SV=2
Length = 547
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/360 (65%), Positives = 277/360 (76%), Gaps = 53/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIVMTNDGNAILREI VQHPA KSMIEI+RTQDEEVGDGTTSVI+LAGEML+V
Sbjct: 48 MLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSV 107
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+FL QMHPTVII AYR AL+DMVN L+ ++STP+D +DR ++++I + + TK I
Sbjct: 108 AEQFLEQQMHPTVIISAYRKALDDMVNTLK-EISTPVDTNDRELMLKIINSAINTKAIKL 166
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
W+D+AC IALDAV+TV +EE+GRKEIDIK+YAKVEKIPGG IEDSCVLRGVM+NKDVTHP
Sbjct: 167 WADMACGIALDAVKTVELEENGRKEIDIKKYAKVEKIPGGIIEDSCVLRGVMVNKDVTHP 226
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
KMRR I+NPRI+LLDC+LEYKKGESQT +EI E D
Sbjct: 227 KMRRLIKNPRIILLDCSLEYKKGESQTEIEITREED------------------------ 262
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
F +ILQ +EEEY+++VC DII LKPD++ TEKG
Sbjct: 263 --------------------FARILQ--------MEEEYIQQVCEDIIRLKPDVVITEKG 294
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
ISDLAQH+L+KANITA+RRVRK+DNNRIARACGA I +RT+ELREEDVGTGAGLFEIKK+
Sbjct: 295 ISDLAQHYLVKANITAVRRVRKTDNNRIARACGARIASRTDELREEDVGTGAGLFEIKKI 354
>sp|Q3T0K2|TCPG_BOVIN T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=1 SV=1
Length = 545
Score = 467 bits (1202), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/360 (64%), Positives = 274/360 (76%), Gaps = 53/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIVMTNDGNAILREI VQHPA KSMIEI+RTQDEEVGDGTTSVI+LAGEML+V
Sbjct: 49 MLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSV 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE FL QMHPTV+I AYR AL+DM++ L+ K+S P+D S+R ++ +I + + TK I +
Sbjct: 109 AEHFLEQQMHPTVVISAYRKALDDMISTLK-KISIPVDTSNRDTMLNIINSSITTKVISR 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
WS LACNIALDAV+TV EE+GRKEIDIK+YA+VEKIPGG IEDSCVLRGVM+NKDVTHP
Sbjct: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+MRR I+NPRIVLLD +LEYKKGESQT++EI E D
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREED------------------------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
FT+ILQ+EEEY+++L C DII LKPD++ TEKG
Sbjct: 264 --------------------FTRILQMEEEYIQQL--------CEDIIQLKPDVVITEKG 295
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
ISDLAQH+L++ANITAIRRVRK+DNNRIARACGA IV+R EELREEDVGTGAGL EIKK+
Sbjct: 296 ISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKI 355
>sp|Q6P502|TCPG_RAT T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1
SV=1
Length = 545
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/360 (64%), Positives = 275/360 (76%), Gaps = 53/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIVMTNDGNAILREI VQHPA KSMIEI+RTQDEEVGDGTTSVI+LAGEML+V
Sbjct: 49 MLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSV 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE FL QMHPTV+I AYR AL+DMV+ L+ K+STP+D ++R ++ +I + + TK I +
Sbjct: 109 AEHFLEQQMHPTVVISAYRMALDDMVSTLK-KISTPVDVNNRDMMLNIINSSITTKVISR 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
WS LACNIALDAV+TV EE+GRKEIDIK+YA+VEKIPGG IEDSCVLRGVM+NKDVTHP
Sbjct: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+MRR I+NPRIVLLD +LEYKKGESQT++EI E D
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREED------------------------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
FT+ILQ+EEEY+++L C DII LKPD++ TEKG
Sbjct: 264 --------------------FTRILQMEEEYIQQL--------CEDIIQLKPDVVITEKG 295
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
ISDLAQH+L++AN+TAIRRVRK+DNNRIARACGA IV+R EELRE+DVGTGAGL EIKK+
Sbjct: 296 ISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKI 355
>sp|P80318|TCPG_MOUSE T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1
Length = 545
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 231/360 (64%), Positives = 274/360 (76%), Gaps = 53/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIVMTNDGNAILREI VQHPA KSMIEI+RTQDEEVGDGTTSVI+LAGEML+V
Sbjct: 49 MLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSV 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE FL QMHPTV+I AYR AL+DM++ L+ K+STP+D ++R ++ +I + + TK I +
Sbjct: 109 AEHFLEQQMHPTVVISAYRMALDDMISTLK-KISTPVDVNNREMMLSIINSSITTKVISR 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
WS LACNIALDAV+TV EE+GRKEIDIK+YA+VEKIPGG IEDSCVLRGVM+NKDVTHP
Sbjct: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+MRR I+NPRIVLLD +LEYKKGESQT++EI E D
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREED------------------------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
FT+ILQ+EEEY+ +L C DII LKPD++ TEKG
Sbjct: 264 --------------------FTRILQMEEEYIHQL--------CEDIIQLKPDVVITEKG 295
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
ISDLAQH+L++AN+TAIRRVRK+DNNRIARACGA IV+R EELRE+DVGTGAGL EIKK+
Sbjct: 296 ISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKI 355
>sp|P49368|TCPG_HUMAN T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4
Length = 545
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/360 (64%), Positives = 272/360 (75%), Gaps = 53/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIVMTNDGNAILREI VQHPA KSMIEI+RTQDEEVGDGTTSVI+LAGEML+V
Sbjct: 49 MLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSV 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE FL QMHPTV+I AYR AL+DM++ L+ K+S P+D SD ++ +I + + TK I +
Sbjct: 109 AEHFLEQQMHPTVVISAYRKALDDMISTLK-KISIPVDISDSDMMLNIINSSITTKAISR 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
WS LACNIALDAV+ V EE+GRKEIDIK+YA+VEKIPGG IEDSCVLRGVM+NKDVTHP
Sbjct: 168 WSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+MRR I+NPRIVLLD +LEYKKGESQT++EI E D
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREED------------------------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
FT+ILQ+EEEY+++L C DII LKPD++ TEKG
Sbjct: 264 --------------------FTRILQMEEEYIQQL--------CEDIIQLKPDVVITEKG 295
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
ISDLAQH+L++ANITAIRRVRK+DNNRIARACGA IV+R EELRE+DVGTGAGL EIKK+
Sbjct: 296 ISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKI 355
>sp|Q4R963|TCPG_MACFA T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3
PE=2 SV=1
Length = 545
Score = 460 bits (1184), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/360 (64%), Positives = 272/360 (75%), Gaps = 53/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIVMTNDGNAILREI VQHPA KSMIEI+RTQDEEVG GTTSVI+LAGEML+V
Sbjct: 49 MLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGGGTTSVIILAGEMLSV 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE FL QMHPTV+I AYR AL+DM++ L+ K+S P+D +D ++ +I + + TK I +
Sbjct: 109 AEHFLEQQMHPTVVISAYRKALDDMISTLK-KISIPVDINDSDMMLNIINSSITTKAISR 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
WS LACNIALDAV+TV EE+GRKEIDIK+YAKVEKIPGG IEDSCVLRGVM+NKDVTHP
Sbjct: 168 WSSLACNIALDAVKTVQFEENGRKEIDIKKYAKVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+MRR I+NPRIVLLD +LEYKKGESQT++EI E D
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREED------------------------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
FT+ILQ+EEEY+++L C DII LKPD++ TEKG
Sbjct: 264 --------------------FTRILQMEEEYIQQL--------CEDIIQLKPDVVITEKG 295
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
ISDLAQH+L++ANITAIRRVRK+DNNRIARACGA IV+R EELRE+DVGTGAGL EIKK+
Sbjct: 296 ISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKI 355
>sp|Q5NVF9|TCPG_PONAB T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1
Length = 545
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/360 (63%), Positives = 272/360 (75%), Gaps = 53/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIVMTNDGNAILREI VQHPA KSM+EI+RTQDEEVGDGTTSVI+LAGEML+V
Sbjct: 49 MLLDPMGGIVMTNDGNAILREIQVQHPAAKSMVEISRTQDEEVGDGTTSVIILAGEMLSV 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE FL QMHPTV+I AYR AL+DM++ L+ K+S P+D +D ++ +I + + TK I +
Sbjct: 109 AEHFLEQQMHPTVVISAYRKALDDMISTLK-KISIPVDINDSDMMLNIINSSITTKAISR 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
WS LACNIALDAV+ V EE+GRKEIDIK+YA+VEKIPGG IEDSCVLRGVM+NKDVTHP
Sbjct: 168 WSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP 227
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+MRR I+NPRIVLLD +LEYKKGESQT++EI E D
Sbjct: 228 RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREED------------------------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
FT+ILQ+EEEY+++L C DII LKPD++ TEKG
Sbjct: 264 --------------------FTRILQMEEEYIQQL--------CEDIIQLKPDVVITEKG 295
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
ISDLAQH+L++ANITAIRRVRK+DNNRIARACGA IV+R EELRE+DVGTGAGL EIKK+
Sbjct: 296 ISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKI 355
>sp|O74341|TCPG_SCHPO T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct3 PE=1 SV=1
Length = 528
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/360 (56%), Positives = 261/360 (72%), Gaps = 53/360 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DP+G +++TNDG+AILREI V HPA KSMIE+ARTQDEEVGDGTTSVI+LAGE+L
Sbjct: 47 MLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAA 106
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
A L ++HP V+I++++ ALED ++I++ +++ P++ D +++ +I+ C+GTK + +
Sbjct: 107 ASPLLDRKIHPVVMIRSFKQALEDALSIID-EITLPVNVDDNAEMFRLIRTCIGTKLVAR 165
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
WSDL C++AL AV+TV +GR EIDIKRYA+VEK+PGG IE SCVL GVMLNKDVTHP
Sbjct: 166 WSDLMCHLALRAVRTVASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHP 225
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
KMRRRIENPRIVLLDC LEY+KGESQTN+EI ++DW R
Sbjct: 226 KMRRRIENPRIVLLDCPLEYRKGESQTNIEISKDTDWNR--------------------- 264
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
IL++EEE V+++ C+ IIA+KPDL+ TEKG
Sbjct: 265 -----------------------ILEIEEEQVKRM--------CDYIIAVKPDLVITEKG 293
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
+SDLAQH+LLKANITA+RR RKSDNNRIARACGA IVNR E+LRE+DVGTG GLF I K+
Sbjct: 294 VSDLAQHYLLKANITALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGCGLFYIDKL 353
>sp|Q54TH8|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum
GN=cct3 PE=1 SV=1
Length = 530
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/361 (55%), Positives = 257/361 (71%), Gaps = 54/361 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
M++DPMG V+TNDGNAILREI V HPA KSMIE++R QDE VGDGTTSV++LA E+L
Sbjct: 47 MILDPMGTTVVTNDGNAILREIDVTHPAAKSMIELSRAQDENVGDGTTSVVILAAEVLAS 106
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
+E F+ ++HP IIKA+R AL+D ++I++ + S +D +R ++++V+++C+GTKFIGK
Sbjct: 107 SELFIEKKIHPHYIIKAFRMALDDSLSIVD-QYSVAIDLKNRPEVLKVVQSCIGTKFIGK 165
Query: 121 WSDLACNIALDAVQTVTV-EESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTH 179
W L CN+ALDAV TV + EE GR EIDIKRYAKVEKIPGG I D V+RGVMLNKDVTH
Sbjct: 166 WGSLMCNLALDAVMTVHIQEEDGRSEIDIKRYAKVEKIPGGDISDCRVIRGVMLNKDVTH 225
Query: 180 PKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLD 239
PKM+R I+NPRIVLLDC+LEYKKGES T V+I NE D
Sbjct: 226 PKMKRMIKNPRIVLLDCSLEYKKGESDTMVDITNEDD----------------------- 262
Query: 240 CTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEK 299
F+ +L K+EEEYV+++C DII LKPDL+FTEK
Sbjct: 263 ---------------------FSALL--------KIEEEYVQRICEDIIKLKPDLVFTEK 293
Query: 300 GISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKK 359
G+SDLAQHF +K IT +RR++KS+NNRIAR GATIV+RT+EL+E D+GTG GLFEI+K
Sbjct: 294 GVSDLAQHFFVKKGITCLRRLKKSENNRIARISGATIVSRTDELQESDIGTGCGLFEIRK 353
Query: 360 V 360
+
Sbjct: 354 I 354
>sp|O00782|TCPG_OXYGR T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3
SV=1
Length = 559
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/361 (54%), Positives = 241/361 (66%), Gaps = 53/361 (14%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIV+TNDGNAILREI V HPA KSMIE+AR QDEEVGDGTTSVI+LAGE+L+
Sbjct: 49 MLLDPMGGIVLTNDGNAILREIDVAHPAAKSMIELARAQDEEVGDGTTSVIILAGEILSA 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
E FL +HPTVI+ AY ALE++V + E+ P+D + + L +++ +C+GTKF K
Sbjct: 109 VESFLERDIHPTVIVGAYFQALEEIVRLTES-YGEPIDIENENDLQKIVSSCIGTKFSSK 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
W +L ++A+ AV++V +E EID+KRYAKVEKIPGG +E+S VL GVM NKDVTHP
Sbjct: 168 WGNLIVDLAVKAVKSVYKKEGDYVEIDVKRYAKVEKIPGGLLEESVVLDGVMFNKDVTHP 227
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
MRR IENPR+VLLDC LEYKKGES TN+E E D
Sbjct: 228 GMRRYIENPRVVLLDCPLEYKKGESMTNMEFTKEED------------------------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
F K L +EEE V+K+ E DI+ +KPD++ TEKG
Sbjct: 264 --------------------FKKALMMEEEEVKKMCAE-------DILRVKPDVVITEKG 296
Query: 301 ISDLAQHFLLK-ANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKK 359
+SD AQHFLLK N T IRR+RK+DNNRIAR GATI NR EEL+E DVGT GLFEIKK
Sbjct: 297 VSDTAQHFLLKYGNCTVIRRIRKTDNNRIARVTGATIANRPEELQESDVGTKCGLFEIKK 356
Query: 360 V 360
+
Sbjct: 357 I 357
>sp|Q9LKI7|TCPG_THAWE T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2
SV=1
Length = 558
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/373 (51%), Positives = 245/373 (65%), Gaps = 66/373 (17%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIV+TNDGN ILRE+ V HP KSMIE++R DEEVGDGTTSVI+LAGEML
Sbjct: 51 MLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLIN 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE F+ +HPT+I++ Y AL++ + I E + + +D D ++ ++++C+G KF +
Sbjct: 111 AEPFVRTNIHPTIIVRGYNYALQEALTICE-EWALVVDVHDSERVKSLVQSCIGAKFSSR 169
Query: 121 WSDLACNIALDAVQTVTVEE-------------SGRKEIDIKRYAKVEKIPGGTIEDSCV 167
W+D+ ++AL AV TV+ E + + E+DIKRYAKVEKIPGG I D V
Sbjct: 170 WNDIMIDMALKAVLTVSRESRTPSFTPEANDVYAQKMEVDIKRYAKVEKIPGGEISDCAV 229
Query: 168 LRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMR 227
L GVM NKDVTH KMRRRIENPRI+LLD LEYKKGESQTNVEI +E DW
Sbjct: 230 LSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDW---------- 279
Query: 228 RRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDI 287
+L++EEEYVE + C +I
Sbjct: 280 ----------------------------------NTLLKMEEEYVENM--------CMEI 297
Query: 288 IALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREED 347
IA KPD++ TEKG+SDLAQH+ KANITA RR+RK+DNNR+ARA GATIV+RT+E+RE D
Sbjct: 298 IAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIRESD 357
Query: 348 VGTGAGLFEIKKV 360
+GTG GLFE++K+
Sbjct: 358 IGTGCGLFEMRKI 370
>sp|P54408|TCPG_TETPY T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3
SV=1
Length = 559
Score = 361 bits (927), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 184/359 (51%), Positives = 243/359 (67%), Gaps = 54/359 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGGIVMTNDGNAILREI V HPA KSMIE+AR QDEEVGDGTTSVI++AGEM++
Sbjct: 51 MLLDPMGGIVMTNDGNAILREIDVNHPAAKSMIELARVQDEEVGDGTTSVIIMAGEMMSA 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
A+ F+ +HP++I+ AY ALE+ + +E +++ P+D ++ ++ + + +C+GTKF +
Sbjct: 111 AKPFIERDIHPSIIVTAYYRALEESIKKIE-ELAVPIDVNNDDQVNKALSSCIGTKFTSR 169
Query: 121 WSDLACNIALDAVQTVTVEESGRK-EIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTH 179
W L ++AL AV+T+ + +K ++IKRYAKVEKIPGGT+EDS VL GVM NKD+TH
Sbjct: 170 WGKLITDLALKAVRTIMRGGNLQKLNLEIKRYAKVEKIPGGTLEDSVVLDGVMFNKDITH 229
Query: 180 PKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLD 239
PKMRR I+NPR++LLDC LEYKKGES TN+E++ E+D
Sbjct: 230 PKMRRFIKNPRVILLDCPLEYKKGESMTNLEMMKETD----------------------- 266
Query: 240 CTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEK 299
T LQ E E + + CNDI+ KPD++ TEK
Sbjct: 267 ---------------------MTDALQQEMEELALM--------CNDILKHKPDVVITEK 297
Query: 300 GISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIK 358
G+SDLAQH+LLK N++ IRRVRK+DNNRI+R GATIVNR EE++E DVG GLFE+K
Sbjct: 298 GVSDLAQHYLLKQNVSVIRRVRKTDNNRISRVSGATIVNRPEEIQESDVGKKCGLFEVK 356
>sp|P39077|TCPG_YEAST T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT3 PE=1 SV=2
Length = 534
Score = 358 bits (920), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/367 (50%), Positives = 246/367 (67%), Gaps = 60/367 (16%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+DPMGG+V+TNDG+AILREI V HPA KSM+E++RTQDEEVGDGTT+VI+LAGE+L
Sbjct: 47 MLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQ 106
Query: 61 AEKFLSDQ-MHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIG 119
+L ++ +HP +II+A + AL D + +++ +VS P+D + + + ++I+A +GTK++
Sbjct: 107 CAPYLIEKNIHPVIIIQALKKALTDALEVIK-QVSKPVDVENDAAMKKLIQASIGTKYVI 165
Query: 120 KWSDLACNIALDAVQTV------TVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVML 173
WS+ C +ALDAV+TV TVE EIDIKRY +VEKIPGG + DS VL+GV+L
Sbjct: 166 HWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLL 225
Query: 174 NKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENP 233
NKDV HPKM R IENPR+VLLDC LEYKKGESQTN+EI E DW R
Sbjct: 226 NKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNR-------------- 271
Query: 234 RIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPD 293
ILQ+EEE V+ + C I+A++P
Sbjct: 272 ------------------------------ILQIEEEQVQLM--------CEQILAVRPT 293
Query: 294 LIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAG 353
L+ TEKG+SDLAQH+LLK + +RRV+KSDNNRIAR GATIVNR E+L+E DVGT G
Sbjct: 294 LVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCG 353
Query: 354 LFEIKKV 360
LF+++ +
Sbjct: 354 LFKVEMI 360
>sp|Q8SR76|TCPG_ENCCU T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CCT3 PE=1 SV=1
Length = 519
Score = 246 bits (627), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 208/359 (57%), Gaps = 56/359 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
M++ + I +TNDGNAILRE+ V HP+ +S+IE+A+TQD+EVGDGTTSV++LA E+LN
Sbjct: 47 MVLTKINSIELTNDGNAILRELDVAHPSARSLIELAKTQDDEVGDGTTSVVLLAAEILNE 106
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
L +HP I KA ALE + ++ + LD ++ +K I++I V +K
Sbjct: 107 MTYILDRDVHPIRICKALGRALEICIKAIDG-AAISLDSNEETK-IKIINGSVASKICNI 164
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
N+AL+AV+ V V+E + D+K KVEK+ GG + +S V+ GV++NKD+ HP
Sbjct: 165 LKVPIGNLALEAVKKVYVKEENK--CDLKNNMKVEKVLGGNLMESEVVDGVLINKDIIHP 222
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+MRR IENPRIV+++ LEYKKGESQTN E E+D+ R++
Sbjct: 223 QMRRVIENPRIVIIESPLEYKKGESQTNYEFSKENDFTRAL------------------- 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
++EEE V ++C II ++PD++ EKG
Sbjct: 264 ---------------------------------EIEEEQVREMCERIIGVRPDIVVCEKG 290
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKK 359
ISDLA L + NIT +RR++K+D +R+++ CGA V+R E+L E VG GLFE K
Sbjct: 291 ISDLALSILFENNITGLRRLKKTDISRLSKVCGARSVSRPEDLEERHVGVSCGLFEYIK 349
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 209/365 (57%), Gaps = 65/365 (17%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G +V+TNDG IL+EI V+HPA K +IE+A+TQD EVGDGTT+ +VLAGE+L
Sbjct: 51 MLVDSLGDVVITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKR 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L ++HP +I YR A E + IL +++ P+ K D E++K T GK
Sbjct: 111 AEELLDQEIHPAIIANGYRYAAEKALEIL-NEIAIPISKDDD----EILKKIATTAMTGK 165
Query: 121 WSDLACN----IALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKD 176
+++A + IA++AV+ + E +G+ E++ Y K+EK GG+IE++ ++ G++L+K+
Sbjct: 166 GAEVAIDKLAEIAVNAVKMIAEESNGQVEVNTD-YIKIEKRQGGSIEETELVDGIVLDKE 224
Query: 177 VTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHP-KMRRRIENPRI 235
V HP M +R+EN +I+LLD LE K+ E D + +T P K+++ IE
Sbjct: 225 VVHPGMPKRVENAKILLLDSALEVKE----------TEIDAKIRITDPEKLQKFIEQ--- 271
Query: 236 VLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLI 295
EE ++++ + I+ +++
Sbjct: 272 ----------------------------------------EEAMLKEMVDKIVNAGANVV 291
Query: 296 FTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLF 355
F +KGI DLAQ++L KA + A+RRV+KSD ++A+A GA ++ ++ ED+G A L
Sbjct: 292 FCQKGIDDLAQYYLAKAGVLAVRRVKKSDMEKLAKATGAKVLTDLRDISSEDLGE-AALV 350
Query: 356 EIKKV 360
E +KV
Sbjct: 351 EERKV 355
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 210/363 (57%), Gaps = 58/363 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D G I +TNDG I++E+ +QHPA K ++E+A+ QD EVGDGTTSV+VLAG +L
Sbjct: 50 MLVDAFGDITVTNDGATIVKEMEIQHPAAKLLVEVAKAQDAEVGDGTTSVVVLAGALLEK 109
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AEK L + +HPT+II+ Y A+E+ + +++ + + P++ D S L + + + +KF+G
Sbjct: 110 AEKLLDENLHPTIIIEGYTKAMEEALRLVD-EAAVPVEVEDDSVLRRIAETTLASKFVGT 168
Query: 121 WS--DLACNIALDAVQTVTVEES-GRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDV 177
D ++ +DA++TV + G E+D+ Y K+EK GG++ DS ++RG++L+K+V
Sbjct: 169 GPERDKIISMVIDAIRTVAEKRPDGGYEVDLD-YVKIEKKKGGSLLDSKLVRGIVLDKEV 227
Query: 178 THPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVL 237
HP M +R+EN +I++LD LE +K E T + + + IE
Sbjct: 228 VHPAMPKRVENAKILVLDAPLEVQKPELTTKIRVTD----------------IEK----- 266
Query: 238 LDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFT 297
L+ LE E T++L+ + VEK+ A +++ T
Sbjct: 267 LESFLE----------------EETRMLR-----------DMVEKIA----ATGANVVIT 295
Query: 298 EKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEI 357
+KGI ++AQHFL K I A+RRV++SD ++A+A GA IV +L+ E +G A L E
Sbjct: 296 QKGIDEVAQHFLAKKGILAVRRVKRSDIEKVAKATGAKIVTSLRDLKPEYLGY-AELVEE 354
Query: 358 KKV 360
+KV
Sbjct: 355 RKV 357
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/360 (35%), Positives = 202/360 (56%), Gaps = 61/360 (16%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL+E+ ++HPA K ++E+A+TQ++EVGDGTT+ +++AGE+L
Sbjct: 50 MLVDSLGDIVVTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKK 109
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE L ++HPT+I YR A E IL+ +D SDR L++V + K K
Sbjct: 110 AENLLEMEIHPTIIAMGYRQAAEKAQEILD---DIAIDASDRDTLMKVAMTAMTGKGTEK 166
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ + +DAV+ VEE G E K + K+EK G ++DS +++GV+++K+ HP
Sbjct: 167 AREPLAELIVDAVK--QVEEDGEVE---KDHIKIEKKEGAAVDDSTLVQGVIIDKERVHP 221
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M +++EN +I LL+C +E K E++ + EI RI +P
Sbjct: 222 GMPKKVENAKIALLNCPIEVK--ETEVDAEI-----------------RITDP------- 255
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
SQ ++E+ EE+ + + N I+ +++F +KG
Sbjct: 256 --------SQMQA-----------------FIEQ-EEQMIRDMVNSIVDTGANVLFCQKG 289
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I DLAQH+L KA + A+RRV+KSD ++++A GA IV E+L ED+G AG+ KK+
Sbjct: 290 IDDLAQHYLAKAGVLAVRRVKKSDMEKLSKATGANIVTNIEDLSPEDLGE-AGVVSEKKI 348
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 208 bits (530), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 203/360 (56%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D MG +V+TNDG IL E+ ++HPA K ++E+A+TQ++EVGDGTT+ +VLAGE+L+
Sbjct: 53 MLVDEMGDVVVTNDGVTILEEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHK 112
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE L +HPTVI + YR A+E ILE +D D L ++ K + K + K
Sbjct: 113 AEDLLQQDIHPTVIARGYRMAVEKAEEILEEIAEE-IDPDDEETLKKIAKTAMTGKGVEK 171
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
D + + AV+ V EE G ID + K+EK GG +ED+ +++G++++K+ HP
Sbjct: 172 ARDYLAELVVKAVKQVAEEEDGEIVIDTD-HIKLEKKEGGGLEDTELVKGMVIDKERVHP 230
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M RR+EN +I LL+C +E K E++T+ EI RI +P
Sbjct: 231 GMPRRVENAKIALLNCPIEVK--ETETDAEI-----------------RITDPE------ 265
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
QL + ++E+ EE + ++ + I +++F +KG
Sbjct: 266 -------------------------QL-QAFIEE-EERMLSEMVDKIAETGANVVFCQKG 298
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I DLAQH+L K I A+RRV+KSD ++ARA GA IV ++L EED+G A + E KKV
Sbjct: 299 IDDLAQHYLAKKGILAVRRVKKSDMQKLARATGARIVTNIDDLSEEDLGE-AEVVEEKKV 357
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 203/364 (55%), Gaps = 63/364 (17%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL E+ +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP++IIK Y A E IL++ ++ +D DR E++K T GK
Sbjct: 111 AEELLDQNIHPSIIIKGYALAAEKAQEILDS-IARDVDVEDR----EILKKAAMTAITGK 165
Query: 121 WS----DLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKD 176
+ + IA++AV+ V + R +D+ K EK GG+++D+ +++GV+++K+
Sbjct: 166 AAEEEREYLAEIAVEAVKQVAEKVGDRYHVDLDNI-KFEKKEGGSVKDTQLIKGVVIDKE 224
Query: 177 VTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236
V HP MR+R+E +I L++ LE K E++T+ EI RI +P
Sbjct: 225 VVHPGMRKRVEGAKIALINEALEVK--ETETDAEI-----------------RITSP--- 262
Query: 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIF 296
+ LQ E EK+ E V+K+ + +++F
Sbjct: 263 --------------------------EQLQAFLEQEEKMLREMVDKIKE----VGANVVF 292
Query: 297 TEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFE 356
+KGI DLAQH+L K I A+RRV+KSD ++A+A GA IV +L ED+G A L E
Sbjct: 293 VQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGE-AELVE 351
Query: 357 IKKV 360
+KV
Sbjct: 352 QRKV 355
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 210/364 (57%), Gaps = 65/364 (17%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL+E++V+HPA K +IE+A+TQ++EVGDGTT+ +V+AGE+L
Sbjct: 50 MLVDELGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRK 109
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP+VII Y A V L++ + K + + E++K T GK
Sbjct: 110 AEELLDQNIHPSVIINGYEMARNKAVEELKS-----IAKEVKPEDTEMLKKIAMTSITGK 164
Query: 121 WSDLA----CNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKD 176
++ A I ++AV+ V EE+G+ + D+ KVEK G IE++ ++RGV+++K+
Sbjct: 165 GAEKAREQLAEIVVEAVRAVVDEETGKVDKDL---IKVEKKEGAPIEETKLIRGVVIDKE 221
Query: 177 VTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236
+P+M +++EN +I LL+C +E K E++T+ EI RI +P +
Sbjct: 222 RVNPQMPKKVENAKIALLNCPIEVK--ETETDAEI-----------------RITDPAKL 262
Query: 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIF 296
+ E++E+ EE+ ++ + I A +++F
Sbjct: 263 M--------------------------------EFIEQ-EEKMIKDMVEKIAATGANVVF 289
Query: 297 TEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFE 356
+KGI DLAQH+L K I A+RRV+KSD ++A+A GA IV + ++L ED+G AGL E
Sbjct: 290 CQKGIDDLAQHYLAKKGILAVRRVKKSDMEKLAKATGARIVTKIDDLTPEDLGE-AGLVE 348
Query: 357 IKKV 360
+KV
Sbjct: 349 ERKV 352
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 203/360 (56%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G I +TN+G IL ++ V HPA K +++I++ Q++E GDGT + ++ AGE+L
Sbjct: 58 MLVDSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKE 117
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AEK L +HPT+I++ Y+ AL ++E+ ++ P+ D KL + K + +K + +
Sbjct: 118 AEKLLDINIHPTIIVEGYKEALRKASEVIES-IAEPVSYDDVEKLKLIAKTSLNSKAVAE 176
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
D +A++AV+TV R +D+ V+K GG++ D+ ++RG++L+K+V HP
Sbjct: 177 ARDYFAELAVEAVRTVAERRGDRWYVDLNNIQIVKK-HGGSLRDTRLVRGIVLDKEVVHP 235
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M RR+EN RI LLD LE +K E ++EI S+T P+ + +
Sbjct: 236 DMPRRVENARIALLDTPLEIEKPE--IDLEI--------SITSPEQIKAL---------- 275
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
Y+K E +ILQ E +EK+ A +++ T+KG
Sbjct: 276 ---YEKQE--------------RILQ-----------EKIEKIA----ATGANVVITQKG 303
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I D+AQHFL K I A+RRV++SD +IARA GA IV E+LR ED+G A L E +KV
Sbjct: 304 IDDVAQHFLAKKGILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGY-AELVEERKV 362
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/360 (35%), Positives = 205/360 (56%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL E+ +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP++IIK Y A + IL++ ++ + D L++ + K +
Sbjct: 111 AEELLDQNIHPSIIIKGYTLASQKAQEILDS-IAKEVKPDDEEVLLKAAMTAITGKAAEE 169
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ +A++AV+ V E+ G+ ++DI K+EK GG + D+ ++RGV+++K+V HP
Sbjct: 170 EREYLAKLAVEAVKLVAEEKDGKLKVDIDNI-KLEKKEGGAVRDTRLIRGVVIDKEVVHP 228
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M +RIEN +I L++ LE K E++T+ EI RI +P
Sbjct: 229 GMPKRIENAKIALINDALEVK--ETETDAEI-----------------RITSPE------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
QL + ++E+ EE+ ++++ + I + +++F +KG
Sbjct: 264 -------------------------QL-QAFLEQ-EEKMLKEMVDKIKEVGANVVFVQKG 296
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I DLAQH+L K I A+RRV+KSD ++A+A GA IV +L ED+G A L E +KV
Sbjct: 297 IDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGE-AELVEERKV 355
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 205 bits (521), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 196/349 (56%), Gaps = 54/349 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL +I +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP++IIK Y A E IL+ +++ +D D L+++ + K
Sbjct: 111 AEELLDQNIHPSIIIKGYALAAEKAQEILD-EIAIRVDPDDEETLLKIAATSITGKNAES 169
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+L +A++AV+ V ++ G+ +D+ K EK G +E+S ++RGV+++K+V HP
Sbjct: 170 HKELLAKLAVEAVKQVAEKKDGKYVVDLDNI-KFEKKAGEGVEESELVRGVVIDKEVVHP 228
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+M +R+EN +I L++ LE KK E+D + ++T P D
Sbjct: 229 RMPKRVENAKIALINEALEVKK----------TETDAKINITSP--------------DQ 264
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
+ + LE+ EE+ ++ + + I +++F +KG
Sbjct: 265 LMSF----------------------LEQ------EEKMLKDMVDHIAQTGANVVFVQKG 296
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVG 349
I DLAQH+L K I A+RRV+KSD ++A+A GA IV ++L ED+G
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLG 345
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 205 bits (521), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 196/349 (56%), Gaps = 54/349 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL +I +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP++IIK Y A E IL+ +++ +D D L+++ + K
Sbjct: 111 AEELLDQNIHPSIIIKGYALAAEKAQEILD-EIAIRVDPDDEETLLKIAATSITGKNAES 169
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+L +A++AV+ V ++ G+ +D+ K EK G +E+S ++RGV+++K+V HP
Sbjct: 170 HKELLAKLAVEAVKQVAEKKDGKYVVDLDNI-KFEKKAGEGVEESELVRGVVIDKEVVHP 228
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+M +R+EN +I L++ LE KK E+D + ++T P D
Sbjct: 229 RMPKRVENAKIALINEALEVKK----------TETDAKINITSP--------------DQ 264
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
+ + LE+ EE+ ++ + + I +++F +KG
Sbjct: 265 LMSF----------------------LEQ------EEKMLKDMVDHIAQTGANVVFVQKG 296
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVG 349
I DLAQH+L K I A+RRV+KSD ++A+A GA IV ++L ED+G
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLG 345
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 203/360 (56%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL E+ +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP+++IK Y A E IL++ ++ + D L++ + K +
Sbjct: 111 AEELLDQNIHPSIVIKGYMLAAEKAQEILDS-IAKEVKPDDEEVLLKAAMTAITGKAAEE 169
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ +A++AV+ V E+ G+ ++DI K EK GG + D+ ++RGV+++K+V HP
Sbjct: 170 EREYLAKLAVEAVKLVAEEKDGKFKVDIDNI-KFEKKEGGAVSDTKLIRGVVIDKEVVHP 228
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M +R+E +I L++ LE K E++T+ EI RI +P
Sbjct: 229 GMPKRVEKAKIALINDALEVK--ETETDAEI-----------------RITSPE------ 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
QL + ++E+ EE+ ++++ + I + +++F +KG
Sbjct: 264 -------------------------QL-QAFLEQ-EEKMLKEMVDKIKEVGANVVFVQKG 296
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I DLAQH+L K I A+RRV+KSD ++A+A GA IV +L ED+G A L E +KV
Sbjct: 297 IDDLAQHYLAKYGILAVRRVKKSDMEKLAKATGAKIVTNIRDLTPEDLGE-AELVEERKV 355
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 203/364 (55%), Gaps = 63/364 (17%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G +V+TNDG IL+E+ V+HPA K +IE+A+TQD EVGDGTT+ +VLAGE+L
Sbjct: 51 MLVDSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HPTVI + YR A V ILE+ ++ +D D E +K T GK
Sbjct: 111 AEELLDQDIHPTVIARGYRMAANKAVEILES-IAMDIDVEDE----ETLKKIAATAITGK 165
Query: 121 WSDLACN----IALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKD 176
S+ A + + ++AV+ V + R ++D + K+EK GG++ D+ ++ G++++K+
Sbjct: 166 HSEYALDHLSSLVVEAVKRVAEKVDDRYKVD-EDNIKLEKRQGGSVADTKLVNGIVIDKE 224
Query: 177 VTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236
V HP M +R++N +I +L LE K E++T+ EI RI +P
Sbjct: 225 VVHPGMPKRVKNAKIAVLKAALEVK--ETETDAEI-----------------RITDPD-- 263
Query: 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIF 296
+ K ++ EE+ ++++ + E N ++F
Sbjct: 264 -----------------------QLMKFIEQEEKMLKEMVDRLAEAGAN--------VVF 292
Query: 297 TEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFE 356
+KGI DLAQ++L KA I A+RRV++SD +IA+ACGA I+ E+ D+G A L E
Sbjct: 293 CQKGIDDLAQYYLAKAGILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGE-AELVE 351
Query: 357 IKKV 360
+KV
Sbjct: 352 ERKV 355
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 197/360 (54%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G + +TNDG IL + +QHPA K ++++A++QD EVGDGT ++LAGE+L
Sbjct: 35 MLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKY 94
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HPTVII YR A+E+ + IL+ +++ P+D ++ L +V + + +K +
Sbjct: 95 AEELLDKNIHPTVIISGYRMAMEEALKILD-QMAEPIDLNNEELLRKVARTSLTSKAVHD 153
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ +IA+ AV+ V + + +D+ ++K GG + DS ++ G++L+K+V HP
Sbjct: 154 AREFFADIAVKAVKQVVEKRGDKNYVDLDNIQIIKKY-GGALLDSMLVYGIVLDKEVVHP 212
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M RR+EN +IVLLD LE +K E + RI +P
Sbjct: 213 GMPRRVENAKIVLLDAPLEIEKPEIDAEI-------------------RINDPE------ 247
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
+ K LQ EEE + K+ + I ++ +++ +KG
Sbjct: 248 -------------------QLEKFLQQEEEILMKM--------VDKIASVGANVVVCQKG 280
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I ++AQHFL K I A+RRV++SD ++ RA G IV+ E+L ED+G A L E +KV
Sbjct: 281 IDEVAQHFLAKKGILAVRRVKRSDLEKLERATGGRIVSNIEDLTPEDLGY-AALVEERKV 339
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 194/349 (55%), Gaps = 54/349 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL +I +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP++IIK Y A E ILE +++ ++ D L+ + + K
Sbjct: 111 AEELLDQNIHPSIIIKGYALAAEKAQEILE-EIAIKVNPDDEETLLRIAMTSITGKNAES 169
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+L +A+DAV+ V ++ G+ +D+ K EK G +E+S ++RGV+++K+V HP
Sbjct: 170 HKELLAKLAVDAVKQVAEKKDGKYVVDLDNI-KFEKKAGEGVEESELVRGVVIDKEVVHP 228
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+M +R+E +I L++ LE KK E+D + ++T P D
Sbjct: 229 RMPKRVEGAKIALINEALEVKK----------TETDAKINITSP--------------DQ 264
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
+ + LE+ EE+ ++ + + I +++F +KG
Sbjct: 265 LMSF----------------------LEQ------EEKMLKDMVDHIAQTGANVVFVQKG 296
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVG 349
I DLAQH+L K I A+RRV+KSD ++A+A GA IV ++L ED+G
Sbjct: 297 IDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLG 345
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 202/364 (55%), Gaps = 63/364 (17%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL E+ +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP++IIK Y A E IL+ +++ +D DR E++K T GK
Sbjct: 111 AEELLDQNIHPSIIIKGYALAAEKAQEILD-EIAKDVDVEDR----EILKKAAVTSITGK 165
Query: 121 WS----DLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKD 176
+ + IA++AV+ V + ++D+ K EK GG+++D+ +++GV+++K+
Sbjct: 166 AAEEEREYLAEIAVEAVKQVAEKVGETYKVDLDNI-KFEKKEGGSVKDTQLIKGVVIDKE 224
Query: 177 VTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236
V HP M +R+E +I L++ LE K E++T+ EI RI +P
Sbjct: 225 VVHPGMPKRVEGAKIALINEALEVK--ETETDAEI-----------------RITSPE-- 263
Query: 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIF 296
L LE + EK+ E V+K+ + +++F
Sbjct: 264 QLQAFLEQE---------------------------EKMLREMVDKIKE----VGANVVF 292
Query: 297 TEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFE 356
+KGI DLAQH+L K I A+RRV+KSD ++A+A GA IV +L ED+G A L E
Sbjct: 293 VQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGE-AELVE 351
Query: 357 IKKV 360
+KV
Sbjct: 352 QRKV 355
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 202/364 (55%), Gaps = 63/364 (17%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL E+ +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HP++IIK Y A E IL+ +++ +D DR E++K T GK
Sbjct: 111 AEELLDQNIHPSIIIKGYALAAEKAQEILD-EIAKDVDVEDR----EILKKAAVTSITGK 165
Query: 121 WS----DLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKD 176
+ + IA++AV+ V + ++D+ K EK GG+++D+ +++GV+++K+
Sbjct: 166 AAEEEREYLAEIAVEAVKQVAEKVGETYKVDLDNI-KFEKKEGGSVKDTQLIKGVVIDKE 224
Query: 177 VTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236
V HP M +R+E +I L++ LE K E++T+ EI RI +P
Sbjct: 225 VVHPGMPKRVEGAKIALINEALEVK--ETETDAEI-----------------RITSPE-- 263
Query: 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIF 296
L LE + EK+ E V+K+ + +++F
Sbjct: 264 QLQAFLEQE---------------------------EKMLREMVDKIKE----VGANVVF 292
Query: 297 TEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFE 356
+KGI DLAQH+L K I A+RRV+KSD ++A+A GA IV +L ED+G A L E
Sbjct: 293 VQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGE-AELVE 351
Query: 357 IKKV 360
+KV
Sbjct: 352 QRKV 355
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 199 bits (505), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 214/360 (59%), Gaps = 58/360 (16%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL+E++V+HPA K +IE+A+TQ++EVGDGTT+ +V+AGE+L
Sbjct: 49 MLVDDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRK 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L +HPT++IK Y+ A++ +L+ +++ + D+ L ++ + K K
Sbjct: 109 AEELLDQNVHPTIVIKGYQLAVQKAQEVLK-EIAMDVKADDKEILHKIAMTSITGKGAEK 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ + ++AV T V+ESG+ + D+ K+EK G +++++ ++ GV+++K+ P
Sbjct: 168 AKEKLGEMIVEAV-TAVVDESGKVDKDL---IKIEKKEGASVDETELINGVLIDKERVSP 223
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
+M ++IEN +I LL+C +E K E++T+ EI RI +P
Sbjct: 224 QMPKKIENAKIALLNCPIEVK--ETETDAEI-----------------RITDP------- 257
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
TK++ E++E+ EE+ ++ + + I A +++F +KG
Sbjct: 258 ---------------------TKLM----EFIEQ-EEKMLKDMVDTIKASGANVLFCQKG 291
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I DLAQH+L K I A+RRV+KSD ++++A GA +V ++L+ ED+G AG+ E +K+
Sbjct: 292 IDDLAQHYLAKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGE-AGIVEERKI 350
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 198 bits (504), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 201/366 (54%), Gaps = 67/366 (18%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL E+ +QHPA K M+E+A+TQD+E GDGTT+ +V+AGE+L
Sbjct: 51 MLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKK 110
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILE--TKVSTPLDKSDRSKLIEVIKACVGTKFI 118
AE+ L +HP++IIK Y A E ILE K +P D +E +K T
Sbjct: 111 AEELLDQNIHPSIIIKGYALAAEKAQEILEGIAKEVSPDD-------VETLKKAAVTSIT 163
Query: 119 GKWS----DLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLN 174
GK + + IA++AV+ V + + ++D+ K EK G ++ ++ ++RGV+++
Sbjct: 164 GKAAEEEREYLAEIAVEAVRQVAEKVGDKYKVDLDNI-KFEKKEGASVHETQLIRGVVID 222
Query: 175 KDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPR 234
K+V HP M +R+EN +I L++ LE K E++T+ EI RI +P
Sbjct: 223 KEVVHPGMPKRVENAKIALINDALEVK--ETETDAEI-----------------RITSPE 263
Query: 235 IVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDL 294
QL + ++E+ EE + ++ + I + ++
Sbjct: 264 -------------------------------QL-QAFLEQ-EERMLREMVDKIKEVGANV 290
Query: 295 IFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGL 354
+F +KGI DLAQH+L K I A+RRV+KSD ++A+A GA IV +L ED+G A L
Sbjct: 291 VFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGE-AEL 349
Query: 355 FEIKKV 360
E +KV
Sbjct: 350 VEQRKV 355
>sp|P48425|THSB_THEAC Thermosome subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsB PE=1 SV=1
Length = 543
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 203/358 (56%), Gaps = 54/358 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG IL+E+ V+HPA K M+E+++TQD VGDGTT+ +++AG +L
Sbjct: 49 MLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQ 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
A+ ++ +HPTVI + YR A E+ +++ ++ST + +++ L+++ + + +K
Sbjct: 109 AQGLINQNVHPTVISEGYRMASEEAKRVID-EISTKIGADEKALLLKMAQTSLNSKSASV 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
D I+ +AV++V G+ +D V+K GG I+D+ ++ G++++K+ HP
Sbjct: 168 AKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKK-QGGAIDDTQLINGIIVDKEKVHP 226
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M +++ +I LLD LE KK E TN+ RIE+P ++
Sbjct: 227 GMPDVVKDAKIALLDAPLEIKKPEFDTNL-------------------RIEDPSMI---- 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
++++ + EE + ++ + I ++ +++ T+KG
Sbjct: 264 ----------------------------QKFLAQ-EENMLREMVDKIKSVGANVVITQKG 294
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIK 358
I D+AQH+L +A I A+RRV+KSD +++A+A GA+IV+ +E+ D+GT + ++K
Sbjct: 295 IDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVK 352
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 181 bits (459), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 197/360 (54%), Gaps = 67/360 (18%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D G + +TNDG I++E+ +QHPA K ++E A+ QD EVGDGTTS +VLAG +L+
Sbjct: 48 MLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDK 107
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSD------RSKLIEVIKACVG 114
A+ L +HPT+II+ Y+ AL + I++ +++T +D S+ R +L +++ +
Sbjct: 108 ADDLLDQNIHPTIIIEGYKKALNKSLEIID-QLATKIDVSNLNSLATRDQLKKIVYTTMS 166
Query: 115 TKFI--GKWSDLACNIALDAVQTVT--VEESGRK-EIDIKRYAKVEKIPGGTIEDSCVLR 169
+KFI G+ D N+ +DAV V + E G +D+ K++K GG+IEDS ++
Sbjct: 167 SKFIAGGEEMDKIMNMVIDAVSIVAEPLPEGGYNVPLDL---IKIDKKKGGSIEDSMLVH 223
Query: 170 GVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRR 229
G++L+K+V HP M RR+E +I +LD LE +K E + S+T P+ +
Sbjct: 224 GLVLDKEVVHPGMPRRVEKAKIAVLDAALEVEKPEISAKI----------SITSPEQIKA 273
Query: 230 IENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIA 289
L+EE +Y++ + + + +
Sbjct: 274 F------------------------------------LDEEA------KYLKDMVDKLAS 291
Query: 290 LKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVG 349
+ +++ +KGI D+AQHFL K I A+RRV++SD ++ +A GA I++ ++ ED+G
Sbjct: 292 IGANVVICQKGIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLG 351
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/360 (31%), Positives = 191/360 (53%), Gaps = 67/360 (18%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D G + +TNDG I++++ +QHPA K ++E A+ QD EVGDGTTS +VLAG +L
Sbjct: 47 MLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEK 106
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSD------RSKLIEVIKACVG 114
AE L +HPT+II+ Y+ A + +L ++ T +D D R L ++ +
Sbjct: 107 AESLLDQNIHPTIIIEGYKKAYNKALELL-PQLGTRIDIKDLNSSVARDTLRKIAFTTLA 165
Query: 115 TKFIGKWSDL--ACNIALDAVQTVTVEE---SGRKEIDIKRYAKVEKIPGGTIEDSCVLR 169
+KFI + ++L ++ +DA+ V V E +G + + K++K GG+IEDS +++
Sbjct: 166 SKFIAEGAELNKIIDMVIDAI--VNVAEPLPNGGYNVSLD-LIKIDKKKGGSIEDSVLVK 222
Query: 170 GVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRR 229
G++L+K+V HP M RR+ +I +LD LE +K E + S+T P+ +
Sbjct: 223 GLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEISAKI----------SITSPEQIKA 272
Query: 230 IENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIA 289
L+E E +Y++ + + + +
Sbjct: 273 F------------------------------------LDE------ESKYLKDMVDKLAS 290
Query: 290 LKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVG 349
+ +++ +KGI D+AQHFL K I A+RRV++SD ++ +A GA I++ ++ ED+G
Sbjct: 291 IGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLG 350
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 178 bits (451), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 111/359 (30%), Positives = 190/359 (52%), Gaps = 64/359 (17%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D G + +TNDG I++E+ +QHPA K ++E A+ QD EVGDGTTS +VLAG +L+
Sbjct: 47 MLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDK 106
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSD------RSKLIEVIKACVG 114
AE+ L +HPT+II Y+ AL + I++ ++S +D +D +++L +++ +
Sbjct: 107 AEELLEQNVHPTIIIDGYKKALTKALEIID-QLSLKIDVNDLSSPTAKAQLKKIVSTTMS 165
Query: 115 TKFIGKWS---DLACNIALDAVQTVTVEESGRKEIDIK-RYAKVEKIPGGTIEDSCVLRG 170
+KFI + D ++ +DA+ T+ E+ ++ K++K GG+IEDS ++ G
Sbjct: 166 SKFIAGGAEEIDKIIDLVIDAI-TIVAEKRPDGTYNVPLDLIKIDKKKGGSIEDSILVHG 224
Query: 171 VMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRI 230
++L+K+ V H M RR+
Sbjct: 225 LVLDKE--------------------------------------------VVHAGMPRRV 240
Query: 231 ENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIAL 290
E +I +LD LE +K E + I + + L E Y++ E V+K+ + +
Sbjct: 241 EKAKIAVLDAALEVEKPEISAKISITSPEQIKSFLDEEARYLK----EMVDKLAS----I 292
Query: 291 KPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVG 349
+++ +KGI D+AQHFL K I A+RRV++SD ++ +A GA I++ ++ ED+G
Sbjct: 293 GANVVICQKGIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLG 351
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 177 bits (449), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/360 (30%), Positives = 191/360 (53%), Gaps = 67/360 (18%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D G + +TNDG I++++ +QHPA K ++E A+ QD EVGDGTTS +VLAG +L
Sbjct: 47 MLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEK 106
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSD------RSKLIEVIKACVG 114
AE L +HPT+II+ Y+ A + +L ++ T +D D R L ++ +
Sbjct: 107 AESLLDQNIHPTIIIEGYKKAYTKALELL-PQLGTRIDIRDLNSSVARDTLRKIAFTTLA 165
Query: 115 TKFIGKWSDL--ACNIALDAVQTVTVEE---SGRKEIDIKRYAKVEKIPGGTIEDSCVLR 169
+KFI + ++L ++ +DA+ V V E +G + + K++K GG+IEDS +++
Sbjct: 166 SKFIAEGAELNKIIDMVIDAI--VNVAEPLPNGGYNVSLD-LIKIDKKKGGSIEDSVLVK 222
Query: 170 GVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRR 229
G++L+K+V HP M RR+ +I +LD LE +K E + S+T P+ +
Sbjct: 223 GLVLDKEVVHPGMPRRVTKAKIAVLDAALEVEKPEISAKI----------SITSPEQIKA 272
Query: 230 IENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIA 289
L+E E +Y++ + + + +
Sbjct: 273 F------------------------------------LDE------ESKYLKDMVDKLAS 290
Query: 290 LKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVG 349
+ +++ +KGI D+AQHFL K I A+RRV++SD ++ +A GA I++ ++ +D+G
Sbjct: 291 IGANVVICQKGIDDIAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPDDLG 350
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 190/360 (52%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G I +TNDG IL ++ +QHP GK +++IA+ QDEE DGT + ++LAGE+
Sbjct: 57 MLVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKK 116
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE L ++HPT+I+ Y+ A E + ++ +++ P+ +D L +V +G+K +
Sbjct: 117 AEDLLYKEIHPTIIVSGYKKAEEIALKTIQ-EIAQPVTINDTDVLRKVALTSLGSKAVAG 175
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ ++ + AV V + +D+ V+K GG++ D+ ++ G++++K+V HP
Sbjct: 176 AREYLADLVVKAVAQVAELRGDKWYVDLDNVQIVKK-HGGSVNDTQLVYGIVVDKEVVHP 234
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M +RIEN +I LLD +LE +K E + RI +P
Sbjct: 235 GMPKRIENAKIALLDASLEVEKPELDAEI-------------------RINDP------- 268
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
T++ + EE EE +++ + I A +++ +KG
Sbjct: 269 ---------------------TQMHKFLEE-----EENILKEKVDKIAATGANVVICQKG 302
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I ++AQH+L K I A+RR +KSD ++ARA G +++ +EL +D+G A L E +KV
Sbjct: 303 IDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGY-AALVEERKV 361
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 188/360 (52%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
M +D +G I +TNDG IL ++ +QHP GK +++IA+ QDEE DGT + ++LAGE+
Sbjct: 57 MFVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKK 116
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE L ++HPT+I+ Y+ A E + ++ ++ P+ +D L +V +G+K +
Sbjct: 117 AEDLLYKEIHPTIIVSGYKKAEEIALKTIQ-DIAQPVSINDTDVLRKVALTSLGSKAVAG 175
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ ++ + AV V + +D+ V+K GG+I D+ ++ G++++K+V HP
Sbjct: 176 AREYLADLVVKAVAQVAELRGDKWYVDLDNVQIVKK-HGGSINDTQLVYGIVVDKEVVHP 234
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M +RIEN +I LLD +LE +K E + RI +P
Sbjct: 235 GMPKRIENAKIALLDASLEVEKPELDAEI-------------------RINDP------- 268
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
T++ + EE EE +++ + I A +++ +KG
Sbjct: 269 ---------------------TQMHKFLEE-----EENILKEKVDKIAATGANVVICQKG 302
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I ++AQH+L K I A+RR +KSD ++ARA G +++ +EL +D+G A L E +KV
Sbjct: 303 IDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGY-AALVEERKV 361
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 186/362 (51%), Gaps = 68/362 (18%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G IV+TNDG ILRE+ + HPA K ++E+A+TQ++EVGDGTT+ +++AGE+L
Sbjct: 50 MLVDSLGDIVITNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKE 109
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AEK + +HPT+I YR+A ILE ++ SDR L++V T GK
Sbjct: 110 AEKLIEMGVHPTIIALGYRNAALKAQEILE---EISMEASDRDTLMKV----AITAMTGK 162
Query: 121 WSDLA----CNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKD 176
S+ A + +DAV + VEE G EID K +++I G ++ +S ++ G++++K
Sbjct: 163 GSERAKEKLAELVVDAV--MQVEEDG--EID-KDNINIQRIQGASVNESRIVNGIVIDKS 217
Query: 177 VTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236
M +RIE RI LL +E K E+ + + + S +M+ IE
Sbjct: 218 RADTSMPKRIEKARIALLKYPIEVKDLETDAKIRLTDPS---------QMQAFIEQ---- 264
Query: 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIF 296
EE+ + + I + +++F
Sbjct: 265 ---------------------------------------EEQMIRDMVEKIKSSGANVVF 285
Query: 297 TEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFE 356
+KGI DLA H+L + I A++RV+KSD RI +A GA +V ++L ED+G ++E
Sbjct: 286 CQKGIDDLALHYLSREGIMALKRVKKSDIKRIEKATGARLVTNIDDLTAEDLGEAGVIYE 345
Query: 357 IK 358
K
Sbjct: 346 KK 347
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 188/360 (52%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G I +TNDG IL ++ +QHPA K +++IA+ QDEE DGT + ++ +GE++
Sbjct: 58 MLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKK 117
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L ++HPT+I+ Y+ A E + +E ++ST + +D L +V + +K +
Sbjct: 118 AEELLYKEIHPTIIVSGYKKAEEMAIKTIE-EISTKVSVNDTEILRKVALTSLSSKAVAG 176
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ +I + A+ V + +D+ V+K GG+I D+ ++ G++++K+V HP
Sbjct: 177 AREHLADIVVKAITQVAELRGDKWYVDLDNVQIVKK-HGGSINDTQIVYGIIVDKEVVHP 235
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M +R+EN +I LLD +LE +K E + RI +P
Sbjct: 236 GMPKRVENAKIALLDASLEVEKPELDAEI-------------------RINDP------- 269
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
+ K L EE + +E V+K+ +++ +KG
Sbjct: 270 ------------------TQMKKFLDEEENIL----KEKVDKIAQ----TGANVVICQKG 303
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I ++AQH+L K I A+RR +KSD ++ARA G +V+ +EL +D+G A L E +K+
Sbjct: 304 IDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTSQDLGY-ATLVEERKI 362
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 176/343 (51%), Gaps = 56/343 (16%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G I+++NDG IL+E+ V+HP K ++E+++ QD VGDGTT+ +VL+GE+L
Sbjct: 50 MLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQ 109
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE L +HPTVI YR A+ + I++ +D + L ++ + K G
Sbjct: 110 AETLLDQGVHPTVISNGYRLAVNEARKIID---EIAEKSTDDATLRKIALTALSGKNTGL 166
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+D ++ + AV V G+ +D KV+K GG++ D+ + G++++K+ H
Sbjct: 167 SNDFLADLVVKAVNAVAEVRDGKTIVDTANI-KVDKKNGGSVNDTQFISGIVIDKEKVHS 225
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
KM ++N +I L+D LE KK E + V+I + S +
Sbjct: 226 KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQ---------------------- 263
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
++ E+ T F ++ VEK+++ +++ +KG
Sbjct: 264 --DFLNQETNT---------F-------KQMVEKIKKS------------GANVVLCQKG 293
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEEL 343
I D+AQH+L K I A+RRV+KSD ++A+A GA IV ++L
Sbjct: 294 IDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDL 336
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 186/360 (51%), Gaps = 55/360 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G I +TNDG IL ++ +QHPA K +++IA+ QDEE DGT + ++LAGE++
Sbjct: 58 MLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKK 117
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE+ L ++HPT+I+ ++ A E + +E +++ + +D L +V + +K +
Sbjct: 118 AEELLYKEIHPTIIVSGFKKAEEQALKTIE-EIAQKVSVNDMDILKKVAMTSLNSKAVAG 176
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+ +I AV V R +D+ V+K GG+I D+ ++ G++++K+V
Sbjct: 177 AREYLADIVAKAVTQVAELRGDRWYVDLDNIQIVKK-HGGSINDTQIIYGIVVDKEVV-- 233
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
HP M +R+EN +I LLD
Sbjct: 234 ------------------------------------------HPGMPKRVENAKIALLDA 251
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
+LE +K E + I + + ++ E E L +E V+K+ A +++ +KG
Sbjct: 252 SLEVEKPELDAEIRINDPTQ----MKKFLEEEENLLKEKVDKIA----ATGANVVICQKG 303
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
I ++AQH+L K I A+RR +KSD ++ARA G +V+ +EL +D+G A L E +KV
Sbjct: 304 IDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTPQDLGY-AALVEERKV 362
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 174/349 (49%), Gaps = 58/349 (16%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D G +V+TNDG IL+E+ + HPA ++E++ TQ++EVGDGTT+ ++ AGE+L+
Sbjct: 53 MLVDSGGQVVVTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQ 112
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
AE L +H T I + YR A E +LE + + + DR L ++ + K
Sbjct: 113 AEDLLDSDVHATTIAQGYRQAAEKAKEVLEDN-AIEVTEDDRETLTKIAATAMTGKGAES 171
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
DL + +DAV V ++ ID + +EK+ GGTI++S ++ GV+++K+
Sbjct: 172 AKDLLSELVVDAVLAVKDDDG----IDTNNVS-IEKVVGGTIDNSELVEGVIVDKERVDE 226
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M +E+ I +LD LE ++ E D +VT P
Sbjct: 227 NMPYAVEDANIAILDDALEVRE----------TEIDAEVNVTDPD--------------- 261
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
+ + L EE+ ++++ ++ VE + D +F G
Sbjct: 262 -------------------QLQQFLDQEEKQLKEMVDQLVE--------VGADAVFVGDG 294
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVG 349
I D+AQH+L K I A+RR + SD R+ARA G +V+ +++ +D+G
Sbjct: 295 IDDMAQHYLAKEGILAVRRAKSSDLKRLARATGGRVVSSLDDIEADDLG 343
>sp|Q9V2T7|THSG_SULSO Thermosome subunit gamma OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsC PE=3 SV=1
Length = 535
Score = 155 bits (392), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 184/354 (51%), Gaps = 57/354 (16%)
Query: 9 IVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQ 68
+ +TNDG I++ + VQHP K +IE A+T D EVGDGTTSV+VLAG +L AE L+ +
Sbjct: 51 VTITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQK 110
Query: 69 MHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDL--AC 126
+HPTVII+ YR AL + +L+ ++ + DR + +++ + +KF L
Sbjct: 111 IHPTVIIEGYRKALNSSLELLKN-IADKISPEDRKIVHDLVYTTLSSKFFSTEHTLEKII 169
Query: 127 NIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHPKMRRRI 186
N+ +DA V + G ++DIK K+ K+ GG +DS ++ G++++K+ T+ M +R+
Sbjct: 170 NLVIDASLAVLDKRDGSYDLDIKNI-KIVKVNGGEFDDSELINGIVVDKEPTNENMPKRV 228
Query: 187 ENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKK 246
EN +++L D L+ +K T M+ I +P + K
Sbjct: 229 ENVKVMLADFPLKLEK-------------------TEISMKLGISDPTQI---------K 260
Query: 247 GESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQ 306
G Y+++ + YV+++ + I A+ L T+K I ++A
Sbjct: 261 G-----------------------YLDE-QTAYVKQMVDKIKAMGVKLFITQKDIDEIAS 296
Query: 307 HFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKV 360
+ + K I A++ V++SD ++RA GA I + ++ E D+G A L E++ +
Sbjct: 297 YLMGKNGIMALKNVKRSDIELLSRATGAKIASSMKDANESDLGE-AKLVEVRNL 349
>sp|O94501|TCPA_SCHPO T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct1 PE=3 SV=1
Length = 556
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 172/348 (49%), Gaps = 54/348 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G + +TNDG IL + V+HPAGK ++E+A+ QD+EVGDGTTSV+++A E+L
Sbjct: 49 MLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRR 108
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
A + + +++HPT II YR A+ + V + +S +D + LI V K + +K IG
Sbjct: 109 ANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGN 168
Query: 121 WSDLACNIALDAVQTVTVEES-GRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTH 179
SD +A+DA+ +V S G +K + K G + +S +++G LN +
Sbjct: 169 DSDFFSTMAVDAMLSVKTSNSKGETRYPVK-AVNILKAHGKSSRESVLVKGYALNCTIAS 227
Query: 180 PKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLD 239
M+ R++N +I +LD L+ K +V I++P
Sbjct: 228 QAMKTRVQNAKIAVLDMDLQKTKMALGVHVT-------------------IDDP------ 262
Query: 240 CTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEK 299
+E + E E L E V+K+ N ++I T K
Sbjct: 263 -----------DQLEKIREREVMITL------------ERVKKILN----AGANVILTTK 295
Query: 300 GISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREED 347
GI DL +++A A+RR +K D RIA+A GAT+++ L E+
Sbjct: 296 GIDDLCLKSIIEAGAMAVRRCKKEDLRRIAKASGATLLSSLSNLEGEE 343
>sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1
PE=2 SV=1
Length = 545
Score = 154 bits (389), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 172/348 (49%), Gaps = 54/348 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G + +TNDG ILR + V+HPA K ++E+A QD EVGDGTTSV+++A E+L
Sbjct: 47 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKR 106
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
A + +++HPT II YR A+ + +E K+ T ++K + LI K + +K I
Sbjct: 107 ANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVEKLGKVPLINCAKTSMSSKLISG 166
Query: 121 WSDLACNIALDAVQTVTV-EESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTH 179
SD N+ ++AV +V + + G + IK + K G + DS +L G LN
Sbjct: 167 DSDFFANLVVEAVLSVKMTNQRGEIKYPIKGI-NILKAHGQSARDSYLLNGYALNTGRAA 225
Query: 180 PKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLD 239
M R+ +I LD L+ K + Q V++V + +PR
Sbjct: 226 QGMPLRVSPAKIACLDFNLQ--KTKMQLGVQVV-----------------VNDPR----- 261
Query: 240 CTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEK 299
E KI Q E + + +E +EK ++ ++I T K
Sbjct: 262 --------------------ELEKIRQREAD----MTKERIEK----LLKAGANVILTTK 293
Query: 300 GISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREED 347
GI D+A + ++A A+RRVRK D +A+A GAT+V ++ E+
Sbjct: 294 GIDDMALKYFVEAGAIAVRRVRKEDMRHVAKATGATLVTTFADMEGEE 341
>sp|P41988|TCPA_CAEEL T-complex protein 1 subunit alpha OS=Caenorhabditis elegans
GN=cct-1 PE=3 SV=2
Length = 549
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 53/336 (15%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
ML+D +G +++TNDG IL+++ V+HPAGK ++E+A+ QDEEVGDGTTSV+++A E+L
Sbjct: 48 MLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKR 107
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGK 120
A++ + ++HPT II YR A ++ V + +S D R ++ K + +K IG
Sbjct: 108 ADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGP 167
Query: 121 WSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHP 180
+D + +DA + V VE +G+ I V K G + +S +++G LN V
Sbjct: 168 DADFFGELVVDAAEAVRVENNGKVTYPIN-AVNVLKAHGKSARESVLVKGYALNCTVASQ 226
Query: 181 KMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240
M R++N +I LD +L K H + +E+P
Sbjct: 227 AMPLRVQNAKIACLDFSLMKAK-------------------MHLGISVVVEDP------- 260
Query: 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKG 300
+E + EF + ++ + I+ +++ T G
Sbjct: 261 ----------AKLEAIRREEF----------------DITKRRIDKILKAGANVVLTTGG 294
Query: 301 ISDLAQHFLLKANITAIRRVRKSDNNRIARACGATI 336
I DL +++ A+RR +KSD RIA+A GAT+
Sbjct: 295 IDDLCLKQFVESGAMAVRRCKKSDLKRIAKATGATL 330
>sp|Q9UTM4|TCPE_SCHPO T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct5 PE=3 SV=1
Length = 546
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 182/359 (50%), Gaps = 58/359 (16%)
Query: 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNV 60
+L+ P G I +TNDG IL ++ V+H K +++++++QD+E+GDGTT V+VLAG +L
Sbjct: 62 ILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQ 121
Query: 61 AEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKS--DRSKLIEVIKACVGTKFI 118
AE + +HP I Y A + V L+ +S +D S + + L K +G+K +
Sbjct: 122 AEALIDKGIHPIRIADGYEKACQVAVKHLDA-ISDVVDFSPENTTNLFRSAKTSLGSKVV 180
Query: 119 GKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVT 178
K D NIA+DAV ++V + RK++D + KV+ GG+++D+ +++GV+++KD++
Sbjct: 181 SKAHDHFANIAVDAV--LSVADLQRKDVDFE-LIKVDGKVGGSVDDTKLVKGVVVDKDMS 237
Query: 179 HPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLL 238
HP+M RIEN +I +L C E K PK + ++
Sbjct: 238 HPQMPHRIENAKIAILTCPFEPPK---------------------PKTKHKL-------- 268
Query: 239 DCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTE 298
+I + +EF E ++ E+E +++ + +L+ +
Sbjct: 269 ---------------DITSVSEF--------EALQAYEKEKFQEMIKHVKDAGANLVICQ 305
Query: 299 KGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEI 357
G D A H LL+ N+ A+R V + IA A IV R E+L + +G+ + E+
Sbjct: 306 WGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGSAGIVREV 364
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,087,599
Number of Sequences: 539616
Number of extensions: 5359753
Number of successful extensions: 19220
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 938
Number of HSP's that attempted gapping in prelim test: 18076
Number of HSP's gapped (non-prelim): 1498
length of query: 362
length of database: 191,569,459
effective HSP length: 119
effective length of query: 243
effective length of database: 127,355,155
effective search space: 30947302665
effective search space used: 30947302665
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)