Query psy2832
Match_columns 362
No_of_seqs 163 out of 1778
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 18:03:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2832.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2832hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_G T-complex protein 1 sub 100.0 3.3E-61 1.1E-65 480.2 34.6 309 1-362 37-345 (515)
2 1q3q_A Thermosome alpha subuni 100.0 4.5E-59 1.5E-63 467.6 34.4 307 1-362 51-357 (548)
3 3ko1_A Chaperonin; 9-fold symm 100.0 2.2E-59 7.6E-64 469.5 31.8 307 1-362 58-364 (553)
4 3aq1_B Thermosome subunit; gro 100.0 2.6E-60 9E-65 472.1 24.5 308 1-362 1-308 (500)
5 1a6d_B Thermosome (beta subuni 100.0 3.4E-59 1.1E-63 468.5 32.0 307 1-362 49-355 (543)
6 3iyg_A T-complex protein 1 sub 100.0 9.9E-59 3.4E-63 463.7 35.0 307 1-362 38-352 (529)
7 1a6d_A Thermosome (alpha subun 100.0 1.1E-58 3.9E-63 464.4 31.3 305 1-362 50-354 (545)
8 3ruv_A Chaperonin, CPN; double 100.0 1.8E-58 6.3E-63 462.7 32.6 304 1-362 47-350 (543)
9 3iyg_H T-complex protein 1 sub 100.0 5.5E-58 1.9E-62 456.6 33.8 304 1-362 39-346 (515)
10 3p9d_D T-complex protein 1 sub 100.0 3.2E-58 1.1E-62 459.6 30.4 305 1-362 47-357 (528)
11 3iyg_D T-complex protein 1 sub 100.0 1.8E-57 6.1E-62 453.6 33.3 305 1-362 39-348 (518)
12 3p9d_C T-complex protein 1 sub 100.0 1.5E-58 5E-63 464.9 25.5 309 1-362 47-362 (590)
13 3iyg_B T-complex protein 1 sub 100.0 2.8E-57 9.6E-62 451.7 34.4 300 1-362 38-343 (513)
14 3p9d_A T-complex protein 1 sub 100.0 5.7E-58 1.9E-62 460.2 28.6 307 1-362 52-368 (559)
15 3iyg_E T-complex protein 1 sub 100.0 3.9E-57 1.3E-61 451.2 34.3 305 1-362 38-344 (515)
16 3iyg_Z T-complex protein 1 sub 100.0 4E-57 1.4E-61 450.6 32.2 302 1-362 38-349 (517)
17 3p9d_H T-complex protein 1 sub 100.0 6.2E-57 2.1E-61 453.5 31.0 304 1-362 54-365 (568)
18 3p9d_G T-complex protein 1 sub 100.0 1.7E-57 5.7E-62 456.1 25.2 305 1-362 52-359 (550)
19 3p9d_E T-complex protein 1 sub 100.0 1.4E-56 4.9E-61 450.4 29.4 304 1-361 73-386 (562)
20 3p9d_F T-complex protein 1 sub 100.0 7.7E-57 2.6E-61 451.6 23.3 305 1-362 45-361 (546)
21 3iyg_Q T-complex protein 1 sub 100.0 2.5E-55 8.7E-60 437.8 33.9 301 1-362 39-341 (512)
22 3p9d_B T-complex protein 1 sub 100.0 5.2E-55 1.8E-59 437.0 23.1 300 1-362 45-350 (527)
23 1kp8_A Groel protein; chaperon 100.0 5E-44 1.7E-48 356.9 24.0 267 1-358 38-325 (547)
24 1we3_A CPN60(groel); chaperoni 100.0 1.2E-43 4E-48 354.7 26.5 266 1-358 38-324 (543)
25 1iok_A Chaperonin 60; chaperon 100.0 3.4E-44 1.2E-48 358.3 19.1 267 1-358 39-326 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 5.4E-43 1.9E-47 348.6 21.7 266 1-357 38-323 (546)
27 1gml_A T-complex protein 1 sub 100.0 3E-32 1E-36 234.8 14.0 149 206-362 1-149 (178)
28 1ass_A Thermosome; chaperonin, 100.0 3.3E-31 1.1E-35 223.8 9.9 142 212-362 1-142 (159)
29 3iyg_A T-complex protein 1 sub 99.4 1.3E-15 4.4E-20 152.1 -11.0 194 113-348 106-313 (529)
30 3iyg_G T-complex protein 1 sub 99.4 1.9E-15 6.6E-20 150.4 -11.0 193 113-347 105-310 (515)
31 3iyg_Z T-complex protein 1 sub 99.3 1.7E-14 5.8E-19 143.6 -10.3 200 113-347 106-315 (517)
32 3aq1_B Thermosome subunit; gro 99.2 2.9E-14 1E-18 141.4 -10.3 193 113-344 69-271 (500)
33 3iyg_B T-complex protein 1 sub 99.2 5.1E-14 1.8E-18 140.1 -8.9 199 113-348 108-310 (513)
34 3iyg_H T-complex protein 1 sub 99.2 9.8E-14 3.4E-18 138.0 -8.7 201 113-348 107-313 (515)
35 3iyg_E T-complex protein 1 sub 99.2 1.1E-13 3.9E-18 137.7 -8.7 199 113-347 106-310 (515)
36 3iyg_D T-complex protein 1 sub 99.2 1.4E-13 4.7E-18 137.1 -8.3 198 113-348 107-315 (518)
37 3ko1_A Chaperonin; 9-fold symm 99.2 1.3E-14 4.6E-19 145.2 -16.0 202 104-347 113-330 (553)
38 3p9d_C T-complex protein 1 sub 99.1 1.8E-13 6.1E-18 137.7 -11.5 206 104-344 102-324 (590)
39 3p9d_D T-complex protein 1 sub 99.1 9.8E-14 3.3E-18 138.4 -14.8 198 113-344 115-320 (528)
40 1a6d_B Thermosome (beta subuni 99.1 5.8E-14 2E-18 140.6 -16.9 192 113-346 117-320 (543)
41 1q3q_A Thermosome alpha subuni 99.1 4.7E-14 1.6E-18 141.4 -17.6 191 113-344 119-320 (548)
42 3ruv_A Chaperonin, CPN; double 99.1 5.3E-14 1.8E-18 140.8 -17.5 191 113-345 115-314 (543)
43 3p9d_A T-complex protein 1 sub 99.1 1.6E-13 5.5E-18 137.7 -14.0 190 113-344 120-325 (559)
44 1a6d_A Thermosome (alpha subun 99.0 1.1E-13 3.7E-18 138.7 -16.7 190 112-345 117-318 (545)
45 3iyg_Q T-complex protein 1 sub 99.0 1.1E-12 3.9E-17 130.4 -10.8 194 113-348 107-308 (512)
46 3p9d_G T-complex protein 1 sub 99.0 8.4E-14 2.9E-18 139.5 -20.2 198 113-346 120-324 (550)
47 3p9d_F T-complex protein 1 sub 99.0 1.4E-13 4.9E-18 137.9 -18.9 208 104-344 100-324 (546)
48 3p9d_E T-complex protein 1 sub 98.9 3.7E-13 1.3E-17 135.2 -18.3 210 104-348 128-354 (562)
49 3p9d_H T-complex protein 1 sub 98.9 2.1E-12 7.2E-17 129.8 -15.1 196 112-344 121-328 (568)
50 3p9d_B T-complex protein 1 sub 98.8 6.4E-12 2.2E-16 125.5 -14.8 190 112-342 114-311 (527)
51 1iok_A Chaperonin 60; chaperon 97.5 1.1E-05 3.9E-10 80.3 -0.8 94 113-228 111-206 (545)
52 1kp8_A Groel protein; chaperon 97.5 1.4E-05 4.6E-10 79.8 -0.6 93 113-227 110-204 (547)
53 3rtk_A 60 kDa chaperonin 2; he 97.3 2.1E-05 7.3E-10 78.3 -1.6 104 104-229 97-205 (546)
54 1we3_A CPN60(groel); chaperoni 97.1 4.9E-05 1.7E-09 75.8 -1.0 92 113-227 110-203 (543)
55 1gml_A T-complex protein 1 sub 97.1 0.00032 1.1E-08 59.6 3.8 43 163-205 2-44 (178)
56 3m6c_A 60 kDa chaperonin 1; ch 96.6 0.0068 2.3E-07 51.2 7.9 68 290-359 59-142 (194)
57 1srv_A Protein (groel (HSP60 c 96.4 0.016 5.4E-07 46.7 8.4 77 282-359 44-136 (145)
58 3osx_A 60 kDa chaperonin; alph 96.0 0.031 1.1E-06 47.4 8.8 76 283-359 58-149 (201)
59 1ass_A Thermosome; chaperonin, 95.4 0.007 2.4E-07 50.2 2.5 37 168-204 1-37 (159)
60 1o13_A Probable NIFB protein; 74.3 9.8 0.00033 30.0 7.1 50 285-335 70-119 (136)
61 2yx6_A Hypothetical protein PH 71.9 11 0.00039 28.7 6.8 51 284-335 56-106 (121)
62 2wfb_A Putative uncharacterize 67.1 14 0.00047 28.2 6.4 49 284-333 60-109 (120)
63 1eo1_A Hypothetical protein MT 66.4 18 0.00061 27.7 6.9 50 285-335 59-108 (124)
64 2re2_A Uncharacterized protein 63.9 22 0.00075 27.9 7.1 50 284-335 72-121 (136)
65 1rdu_A Conserved hypothetical 57.4 21 0.00071 26.9 5.7 50 285-335 56-105 (116)
66 2qtd_A Uncharacterized protein 53.9 44 0.0015 24.5 7.0 45 287-333 52-96 (105)
67 1p90_A NAFY protein, hypotheti 26.5 1.2E+02 0.0042 23.8 5.7 29 290-319 66-94 (145)
68 3psh_A Protein HI_1472; substr 21.5 1.9E+02 0.0066 25.4 6.8 35 284-318 77-111 (326)
69 2jpu_A ORF C02003 protein; sol 20.7 1.8E+02 0.006 22.6 5.4 37 53-90 6-42 (129)
No 1
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.3e-61 Score=480.22 Aligned_cols=309 Identities=75% Similarity=1.177 Sum_probs=287.8
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++||+++||||||+||||++||++|++++.+|+||..|++||++
T Consensus 37 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~ 116 (515)
T 3iyg_G 37 MLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRK 116 (515)
T ss_pred EEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ +++++++..|++.|.++|+|++++|.+..|.+.+++++++++..+.++..+...+|+.+++++.++.|+
T Consensus 117 A~~~a~~~L~-~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Gg 195 (515)
T 3iyg_G 117 ALDDMISTLK-KISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGG 195 (515)
T ss_pred HHHHHHHHHH-HhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCC
Confidence 9999999999 999999888899999999999999999999999999999999888643333345677767899999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
++.+|++++|++|++++.+++|++.++||+|++++++++
T Consensus 196 s~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le----------------------------------------- 234 (515)
T 3iyg_G 196 IIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLE----------------------------------------- 234 (515)
T ss_pred CcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEccccc-----------------------------------------
Confidence 999999999999999988888877777777777777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeC
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRV 320 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v 320 (362)
++|+++++++.+++++++.++...|++ +++++++++.+.++++|+++++|+++++++|.++||++++++
T Consensus 235 ---~~k~e~~~~v~is~~~~l~~~l~~E~~--------~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~ 303 (515)
T 3iyg_G 235 ---YKKGESQTDIEITREEDFTRILQMEEE--------YIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRV 303 (515)
T ss_pred ---ccccccCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccC
Confidence 778888889999999999999998888 999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 321 RKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 321 ~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++.+++|||++||+.+++++++++++++|++|+.|++.++|+
T Consensus 304 ~k~~leria~~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~ 345 (515)
T 3iyg_G 304 RKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGD 345 (515)
T ss_pred CHHHHHHHHHHhCCeeeccccccChhhcCCcccEEEEEEECC
Confidence 999999999999999999999999999999779999998874
No 2
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=4.5e-59 Score=467.61 Aligned_cols=307 Identities=38% Similarity=0.661 Sum_probs=286.5
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++++|+||..|++||++
T Consensus 51 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~ 130 (548)
T 1q3q_A 51 MLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYAL 130 (548)
T ss_dssp EEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ +++++++..|++.|.++|+|++++|+..+|.+++++++++|+..+..+..++..+|+ +++.+.++.|+
T Consensus 131 A~~~a~~~L~-~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~-~~I~V~k~~G~ 208 (548)
T 1q3q_A 131 AAEKAQEILD-EIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDL-DNIKFEKKAGE 208 (548)
T ss_dssp HHHHHHHHHH-HHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCG-GGEEEEEEEBS
T ss_pred HHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccC-CeEEEEEecCC
Confidence 9999999999 999999877899999999999999999999999999999999999754323345665 35899999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
++++|++++|+++++++.+++|++.++||+|++++++++
T Consensus 209 ~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le----------------------------------------- 247 (548)
T 1q3q_A 209 GVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEALE----------------------------------------- 247 (548)
T ss_dssp CGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSCBS-----------------------------------------
T ss_pred CccceEEEeeEEEeccCCCCCCcceecCCEEEEEecCcC-----------------------------------------
Confidence 999999999999999998888887777777777777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeC
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRV 320 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v 320 (362)
++|++.++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++.|+++|.++||++++++
T Consensus 248 ---~~k~e~~~~v~i~~~~~l~~~~~~E~~--------~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~ 316 (548)
T 1q3q_A 248 ---VKKTETDAKINITSPDQLMSFLEQEEK--------MLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRV 316 (548)
T ss_dssp ---CCCCSSCCCEEECSHHHHHHHHHHHHH--------HHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSC
T ss_pred ---cccccCCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccC
Confidence 778888899999999999999998888 999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 321 RKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 321 ~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++.++++||++||+.+++++++++++.+|+ |+.|++.++|+
T Consensus 317 ~k~~le~ia~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~ 357 (548)
T 1q3q_A 317 KKSDMEKLAKATGAKIVTNVKDLTPEDLGY-AEVVEERKLAG 357 (548)
T ss_dssp CHHHHHHHHHHHCCCCBSSGGGCCGGGCEE-ESEEEEEEETT
T ss_pred CHHHHHHHHHHhCCeEecccccCCHHHCCC-ceEEEEEEecC
Confidence 999999999999999999999999999999 79999988774
No 3
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.2e-59 Score=469.50 Aligned_cols=307 Identities=33% Similarity=0.599 Sum_probs=286.2
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 58 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~ 137 (553)
T 3ko1_A 58 MLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKK 137 (553)
T ss_dssp EEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHhhccceEEecCccchhhhhhccChhHHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ +++++++..|++.|.++|++++++|.+..|.+++++++++|+..+..+.++...+|++ .+.+.++.|+
T Consensus 138 A~~~a~~~L~-~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~-~I~I~k~~Gg 215 (553)
T 3ko1_A 138 AEEVALQTIQ-ELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLD-NIQIVKKAGG 215 (553)
T ss_dssp HHHHHHHHHH-TTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGG-GEEEEECCCS
T ss_pred HHHHHHHHHH-HhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEech-hHHHHHHhCC
Confidence 9999999999 9999998778999999999999999999999999999999999987643343346665 4889999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
++.+|++++|++|++++.+++|++.++||+|++++++++
T Consensus 216 ~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~~Le----------------------------------------- 254 (553)
T 3ko1_A 216 SINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLE----------------------------------------- 254 (553)
T ss_dssp CGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECSCBS-----------------------------------------
T ss_pred ccccceeeEEEEecccccCCCCccccccceEEEecCccc-----------------------------------------
Confidence 999999999999999998888887777788877777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeC
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRV 320 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v 320 (362)
++|+++++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++.++++|.++||++++++
T Consensus 255 ---~~k~e~~~~v~Iss~~~l~~~~~~E~~--------~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v 323 (553)
T 3ko1_A 255 ---VEKPELDAEIRINDPTQMQKFLDEEEN--------LIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRA 323 (553)
T ss_dssp ---CCCCTTTCCCCCCSHHHHHHHHHHHHH--------HHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCC
T ss_pred ---ccCcccCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhh
Confidence 677888889999999999999988887 999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 321 RKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 321 ~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++.+++|||++||+.+++++++++++++|+ |+.|++.++|+
T Consensus 324 ~k~~leria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~ 364 (553)
T 3ko1_A 324 KKSDLEKLARATGGRVVSNIDEISEQDLGY-ASLIEERKVGE 364 (553)
T ss_dssp CHHHHHHHHTTTTCCEESCGGGCCSSSSEE-CSEEECCCCSS
T ss_pred hhhhHHHHHHhhCCeeecccccCChhhcch-HHHHHHhhcCc
Confidence 999999999999999999999999999999 79999988764
No 4
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.6e-60 Score=472.12 Aligned_cols=308 Identities=38% Similarity=0.674 Sum_probs=222.2
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++++|+||..|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ +++++++..|++.|.++|+|++++|+..+|.+.+++++++|+..+..+..+...+|+.+++++.++.|+
T Consensus 81 A~~~a~~~L~-~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~ 159 (500)
T 3aq1_B 81 AAEKCREILE-TITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGG 159 (500)
T ss_dssp HHHHHHHHHH-HHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESS
T ss_pred HHHHHHHHHH-HhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCC
Confidence 9999999999 999999877899999999999999999999999999999999998644223334563446899999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
++.+|++++|+++++++.+++|++.++||+|++++++++
T Consensus 160 ~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le----------------------------------------- 198 (500)
T 3aq1_B 160 SIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVE----------------------------------------- 198 (500)
T ss_dssp CGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBC-----------------------------------------
T ss_pred CccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCcc-----------------------------------------
Confidence 999999999999999998888887777777777777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeC
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRV 320 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v 320 (362)
++|++.++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++.|+++|.++||++++++
T Consensus 199 ---~~k~e~~~~v~i~~~~~l~~~~~~E~~--------~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~ 267 (500)
T 3aq1_B 199 ---FRKTEVDSEIKITSPGQMQLFLDQEEK--------MMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRV 267 (500)
T ss_dssp ---C-------------------------C--------HHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSC
T ss_pred ---ccccccceeEeeCCHHHHHHHHHHHHH--------HHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeC
Confidence 778888889999999999999988887 999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 321 RKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 321 ~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++.+++|||++||+.+++++++++++.+|+ |+.|++.++|+
T Consensus 268 ~k~~le~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~ 308 (500)
T 3aq1_B 268 KKSDLKRLSKVTGATIIQDLDQITTEDVGT-AGLVEEKEVRG 308 (500)
T ss_dssp CHHHHHHHHHHHCCCCBSCTTCCCSTTCEE-EEEEEEEECSS
T ss_pred CHHHHHHHHHHhCCeEecccccCCHhHCCC-ceEEEEEEecC
Confidence 999999999999999999999999999999 89999998874
No 5
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3.4e-59 Score=468.46 Aligned_cols=307 Identities=37% Similarity=0.629 Sum_probs=286.0
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 49 ml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~ 128 (543)
T 1a6d_B 49 MLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRM 128 (543)
T ss_dssp EEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ +++++++..|++.|.++|+|++++|+..+|.+.+++++++|+..+..+..+...+|++ ++++.++.|+
T Consensus 129 A~~~a~~~L~-~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~-~I~V~k~~G~ 206 (543)
T 1a6d_B 129 ASEEAKRVID-EISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFD-NIQVVKKQGG 206 (543)
T ss_dssp HHHHHHHHHH-HHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGG-GEEEEEEESS
T ss_pred HHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccc-eEEEEEecCC
Confidence 9999999999 9999998767999999999999999999999999999999999997543233356663 5899999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
++++|++++|+++++++.+++|++.++||+|++++++++
T Consensus 207 ~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le----------------------------------------- 245 (543)
T 1a6d_B 207 AIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLE----------------------------------------- 245 (543)
T ss_dssp CGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBS-----------------------------------------
T ss_pred CccceeEEccEEEecCCCCCCCcceecCCeEEEEecccc-----------------------------------------
Confidence 999999999999999998888887777777777777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeC
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRV 320 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v 320 (362)
++|++.++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++.|+++|.++||++++++
T Consensus 246 ---~~k~e~~~~v~i~~~~~l~~~~~~E~~--------~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v 314 (543)
T 1a6d_B 246 ---IKKPEFDTNLRIEDPSMIQKFLAQEEN--------MLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRV 314 (543)
T ss_dssp ---CCCCSSEEEECCCSTTHHHHHHHHHHH--------HHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSC
T ss_pred ---cccccCCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccC
Confidence 778888899999999999999998887 999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 321 RKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 321 ~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++.+++|||++||+.+++++++++++.+|+ |+.|++.++|+
T Consensus 315 ~k~~le~ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~ 355 (543)
T 1a6d_B 315 KKSDMDKLAKATGASIVSTIDEISSSDLGT-AERVEQVKVGE 355 (543)
T ss_dssp CHHHHHHHHHHHTCCEESCGGGCCGGGCEE-EEEEEEEEETT
T ss_pred CHHHHHHHHHHhCCceecccccCCHHHCCC-ceEEEEEEecC
Confidence 999999999999999999999999999999 89999988874
No 6
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.9e-59 Score=463.72 Aligned_cols=307 Identities=33% Similarity=0.501 Sum_probs=281.7
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++++|+||..|++||++
T Consensus 38 ml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~ 117 (529)
T 3iyg_A 38 MLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRL 117 (529)
T ss_pred EEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccc-cCCccccccccceeEEEcC
Q psy2832 81 ALEDMVNILETK-VSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVE-ESGRKEIDIKRYAKVEKIP 158 (362)
Q Consensus 81 a~~~~~~~l~~~-~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~-~~~~~~~d~~~~i~i~ki~ 158 (362)
|++.++++|+ + ++++++..+++.|.++|+|++++|++..|.+++++++++|+..+... .++...+|+. .+.+.++.
T Consensus 118 A~~~a~~~L~-~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~-~I~I~k~~ 195 (529)
T 3iyg_A 118 ACKEAVRYIS-ENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVN-SINVLKAH 195 (529)
T ss_pred HHHHHHHHHH-HhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccc-eEEEEEec
Confidence 9999999999 7 99999877899999999999999999999999999999999988632 1233345554 38899999
Q ss_pred CCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeee
Q psy2832 159 GGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLL 238 (362)
Q Consensus 159 g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~ 238 (362)
|+++.||++++|+++++++.+++|++.++||+|++++++++
T Consensus 196 G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le--------------------------------------- 236 (529)
T 3iyg_A 196 GRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQ--------------------------------------- 236 (529)
T ss_pred CCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCcc---------------------------------------
Confidence 99999999999999999888888887777777777777777
Q ss_pred cccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEe
Q psy2832 239 DCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIR 318 (362)
Q Consensus 239 ~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~ 318 (362)
++|++.++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++.|+++|.++||++++
T Consensus 237 -----~~k~e~~~~v~i~~~~~~~~i~~~E~~--------~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~ 303 (529)
T 3iyg_A 237 -----KTKMKLGVQVVITDPEKLDQIRQRESD--------ITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVR 303 (529)
T ss_pred -----cccccCCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceec
Confidence 777888889999999999999988887 9999999999999999999999999999999999999999
Q ss_pred eCChhhHHHHHHHhCCeEccCCCCCC------CCCCCCCcceEEEEecCC
Q psy2832 319 RVRKSDNNRIARACGATIVNRTEELR------EEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 319 ~v~~~~l~~la~~tG~~iv~~~~~~~------~~~lG~~~~~~~~~~~~~ 362 (362)
++++.+++|||++||+.++++++.++ ++++|+ |+.|+++++|+
T Consensus 304 ~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~-a~~v~~~~ig~ 352 (529)
T 3iyg_A 304 RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQ-AEEVVQERICD 352 (529)
T ss_pred cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCcc-ceEEEEEEeCC
Confidence 99999999999999999999998764 578999 79999888874
No 7
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.1e-58 Score=464.43 Aligned_cols=305 Identities=34% Similarity=0.608 Sum_probs=284.5
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||+++++++++|+||..|++||++
T Consensus 50 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~ 129 (545)
T 1a6d_A 50 MLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRL 129 (545)
T ss_dssp EEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred EEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ +++++ + .|++.|.++|+|++++|+..+|.+++++++++|+..+..+..+...+|+ +.+.+.++.|+
T Consensus 130 A~~~a~~~L~-~~s~~-~-~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~-~~I~V~k~~G~ 205 (545)
T 1a6d_A 130 AVNEARKIID-EIAEK-S-TDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDT-ANIKVDKKNGG 205 (545)
T ss_dssp HHHHHHHHHH-HHCEE-C-CCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCG-GGEEEEECCCS
T ss_pred HHHHHHHHHH-HhcCC-C-CCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCccccc-ceEEEEEecCC
Confidence 9999999999 99988 6 6899999999999999999999999999999999999754333345665 35899999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
++++|++++|+++++++.+++|++.++||+|++++++++
T Consensus 206 ~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le----------------------------------------- 244 (545)
T 1a6d_A 206 SVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALE----------------------------------------- 244 (545)
T ss_dssp CSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSCBS-----------------------------------------
T ss_pred CceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecCCC-----------------------------------------
Confidence 999999999999999998888887777777777777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeC
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRV 320 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v 320 (362)
++|++.++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++.|+++|.++||++++++
T Consensus 245 ---~~k~e~~~~v~i~~~~~l~~~~~~E~~--------~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~ 313 (545)
T 1a6d_A 245 ---IKKTEIEAKVQISDPSKIQDFLNQETN--------TFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRV 313 (545)
T ss_dssp ---CCCCSSCCEEEECSTTHHHHHHHHHHH--------HHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSC
T ss_pred ---cccccCCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccC
Confidence 778888899999999999999998888 999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 321 RKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 321 ~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++.++++||++||+.+++++++++++.+|+ |+.|++.++|+
T Consensus 314 ~k~~le~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~ 354 (545)
T 1a6d_A 314 KKSDMEKLAKATGAKIVTDLDDLTPSVLGE-AETVEERKIGD 354 (545)
T ss_dssp CHHHHHHHHHHHCCCEESSGGGCCGGGCEE-EEEEEEEEETT
T ss_pred CHHHHHHHHHHhCCeeecccccCCHHHCCC-ceEEEEEEecC
Confidence 999999999999999999999999999999 89999988774
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.8e-58 Score=462.72 Aligned_cols=304 Identities=36% Similarity=0.661 Sum_probs=284.4
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 47 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~ 126 (543)
T 3ruv_A 47 MLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQA 126 (543)
T ss_dssp EEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred EEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ +++++++..|++.|.++|++++++|.+..|.+++++++++|+..+..+ ++ .+|++ .+.+.++.|+
T Consensus 127 A~~~a~~~L~-~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~-~g--~~dl~-~I~V~k~~Gg 201 (543)
T 3ruv_A 127 AAQKAQELLK-TIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD-EG--KVDKD-LIKIEKKSGA 201 (543)
T ss_dssp HHHHHHHHHH-HHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCT-TS--CCCGG-GEEEEEEECS
T ss_pred HHHHHHHHHH-HhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcc-CC--Ccccc-eEEEEEcCCC
Confidence 9999999999 999999877899999999999999999999999999999999998754 23 25554 4889999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
++.+|++++|+++++++.+++|++.++||+|++++++++
T Consensus 202 ~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le----------------------------------------- 240 (543)
T 3ruv_A 202 SIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIE----------------------------------------- 240 (543)
T ss_dssp CGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBS-----------------------------------------
T ss_pred CcccceeecceEEeccccCccccccccCcEEEEEccccc-----------------------------------------
Confidence 999999999999999998888887777778777777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeC
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRV 320 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v 320 (362)
++|++.++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++.|+++|.++||++++++
T Consensus 241 ---~~k~e~~~~v~Iss~~~l~~~~~~E~~--------~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v 309 (543)
T 3ruv_A 241 ---IKETETDAEIRITDPAKLMEFIEQEEK--------MLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRV 309 (543)
T ss_dssp ---CCCCSSCCCEEECSTTHHHHHHHHHHH--------HHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSC
T ss_pred ---ccccccCceeEeCCHHHHHHHHHHHHH--------HHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeC
Confidence 777888889999999999999988887 999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 321 RKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 321 ~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++.+++|||++||+.+++++++++++++|+ |+.|++.++|+
T Consensus 310 ~k~~le~ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~ 350 (543)
T 3ruv_A 310 KKSDMEKLAKATGANVIAAIAALSAQDLGD-AGLVEERKISG 350 (543)
T ss_dssp CHHHHHHHHHHHCCCEESCGGGCCGGGCEE-EEEEEEEEETT
T ss_pred CHHHHHHHHHHhCCceecccccCCHHHCCc-ccEEEEEEeCC
Confidence 999999999999999999999999999999 89999988874
No 9
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.5e-58 Score=456.60 Aligned_cols=304 Identities=27% Similarity=0.493 Sum_probs=276.1
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 39 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~ 118 (515)
T 3iyg_H 39 LIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRT 118 (515)
T ss_pred EEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCC----HHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEE
Q psy2832 81 ALEDMVNILETKVSTPLDKSD----RSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEK 156 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~----~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~k 156 (362)
|++.++++|+ ++++|++..+ ++.|.++|+|++++|.++.|.+.+++++++|+..+.. ++|+. .+.+.+
T Consensus 119 A~~~a~~~L~-~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~------~~d~~-~I~V~k 190 (515)
T 3iyg_H 119 ATQLAVNKIK-EIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDD------LLQLK-MIGIKK 190 (515)
T ss_pred HHHHHHHHHH-HhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcc------cCCcc-eEEEEe
Confidence 9999999999 9999997555 7788999999999999999999999999999998852 23443 488999
Q ss_pred cCCCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCccee
Q psy2832 157 IPGGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236 (362)
Q Consensus 157 i~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~ 236 (362)
+.|+++.+|++++|+++++++.||+|.. +|++++||||+
T Consensus 191 ~~Gg~~~ds~lv~G~~~dk~~~~p~~~~-----------------------------------------~p~~~en~kIl 229 (515)
T 3iyg_H 191 VQGGALEESQLVAGVAFKKTFSYAGFEM-----------------------------------------QPKKYHNPMIA 229 (515)
T ss_pred cCCCCccceEEEeeeEEecCccCccccc-----------------------------------------CCccccccEEE
Confidence 9999999999999999999998876521 12334455555
Q ss_pred eecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeE
Q psy2832 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITA 316 (362)
Q Consensus 237 ~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~ 316 (362)
++||+++++|+++++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++++++||.++||++
T Consensus 230 l~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~--------~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~ 301 (515)
T 3iyg_H 230 LLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWN--------ILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFC 301 (515)
T ss_pred EEcccccccccccCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcc
Confidence 5555555888999999999999999999988887 99999999999999999999999999999999999999
Q ss_pred EeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 317 IRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 317 i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++++++.+++|||++||+.+++++++++++.+|+ |+.|++.++|+
T Consensus 302 v~~~~k~~leria~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~ 346 (515)
T 3iyg_H 302 AGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGR-CQVFEETQIGG 346 (515)
T ss_pred cccccHHHHHHHHHHhCCEEeeccccCCHHHCCc-ccEEEEEEEcC
Confidence 9999999999999999999999999999999999 79999998874
No 10
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.2e-58 Score=459.57 Aligned_cols=305 Identities=29% Similarity=0.536 Sum_probs=283.1
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 47 ml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~ 126 (528)
T 3p9d_D 47 MIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQS 126 (528)
T ss_dssp EEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred EEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ ++++|++..|++.|.++|++++++|.+..|.+++++++++|+..+....++ .+|++ .+++.++.|+
T Consensus 127 A~~~a~~~L~-~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~--~i~v~-~I~I~k~~Gg 202 (528)
T 3p9d_D 127 AAKRSVDILL-EMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSK--NVDLN-DIRLVKKVGG 202 (528)
T ss_dssp HHHHHHHHHH-TTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTT--CCCGG-GSBCCCCCSS
T ss_pred HHHHHHHHHH-HhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCC--ccceE-EEEEEEecCC
Confidence 9999999999 999999887899999999999999999999999999999999988653222 45654 4889999999
Q ss_pred CcccceeEeceeeccccCCcc-CcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeec
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPK-MRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLD 239 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~-m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~ 239 (362)
++.+|++++|+++++++.++. |++.++||+|++++++++
T Consensus 203 ~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le---------------------------------------- 242 (528)
T 3p9d_D 203 TIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQIS---------------------------------------- 242 (528)
T ss_dssp CSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSS----------------------------------------
T ss_pred CccceEEEeeeEEeecccCcccCcccccCceEEEEecccc----------------------------------------
Confidence 999999999999999988877 777777777777777777
Q ss_pred ccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCC-----CHHHHHHHHhCCC
Q psy2832 240 CTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGI-----SDLAQHFLLKANI 314 (362)
Q Consensus 240 ~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi-----~~~~~~~l~~~~I 314 (362)
++|++.++.+.+++++++.++...|++ ++..+++++.+.++++|+++++| ++.++++|.++||
T Consensus 243 ----~~k~~~~~~i~i~~~~~~~~~~~~E~~--------~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I 310 (528)
T 3p9d_D 243 ----PPKPDTENNIIVNDYRQMDKILKEERA--------YLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNI 310 (528)
T ss_dssp ----CCCCSSEEEEEESSSSHHHHHTHHHHH--------HHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSC
T ss_pred ----ccccccCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCc
Confidence 677788889999999999999988887 99999999999999999999999 9999999999999
Q ss_pred eEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 315 TAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 315 ~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++++++++.++++||++||+.+++++++++++.+|+ |+.|++.++|+
T Consensus 311 ~av~~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~-a~~v~~~~ig~ 357 (528)
T 3p9d_D 311 MVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLDS-ADLVEEIDSDG 357 (528)
T ss_dssp CEEECCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEE-ESCEECCEETT
T ss_pred EEEEeCCHHHHHHHHHHHCCEEecccccCCHHHCCc-ccEEEEEEECC
Confidence 999999999999999999999999999999999999 79999888764
No 11
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-57 Score=453.59 Aligned_cols=305 Identities=29% Similarity=0.530 Sum_probs=281.1
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 39 ml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~ 118 (518)
T 3iyg_D 39 MIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQK 118 (518)
T ss_pred eeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ ++++|++..+++.|.++|++++++|++..|.+.+++++++|+..+..+. +...+|++ ++.+.++.|+
T Consensus 119 A~~~a~~~L~-~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~-~~~~~d~~-~I~V~k~~Gg 195 (518)
T 3iyg_D 119 ALEKGIEILT-DMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPA-TATSVDLR-DIKIVKKLGG 195 (518)
T ss_pred HHHHHHHHHH-HheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccc-cCCCcccc-eEEEEEcCCC
Confidence 9999999999 9999998878999999999999999999999999999999999886421 11235554 4889999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
++.+|++++|+++++++.+ +||+.++|++|++++++++
T Consensus 196 ~~~ds~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~~Le----------------------------------------- 233 (518)
T 3iyg_D 196 TIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLS----------------------------------------- 233 (518)
T ss_pred ChhhheEeccEEEeccccc-CCCccccCceEEEEEeecc-----------------------------------------
Confidence 9999999999999998877 7777777777777777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEe-----CCCCCHHHHHHHHhCCCe
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFT-----EKGISDLAQHFLLKANIT 315 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~-----~~gi~~~~~~~l~~~~I~ 315 (362)
+++++++..+.+++++++.++...|++ ++..+++++.+.++++|++ +++|++.|+++|.++||+
T Consensus 234 ---~~k~~~~~~i~is~~~~~~~~~~~E~~--------~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~ 302 (518)
T 3iyg_D 234 ---APKTDMDNQIVVSDYVQMDRVLREERA--------YILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIM 302 (518)
T ss_pred ---ccccccCceEEecCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcE
Confidence 666777789999999999999988887 9999999999999999999 899999999999999999
Q ss_pred EEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 316 AIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 316 ~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
+++++++.+++|||++||+.+++++++++++++|+ |+.|++.++|+
T Consensus 303 av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~~g~ 348 (518)
T 3iyg_D 303 VVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGS-AELAEEVSLNG 348 (518)
T ss_pred EEecCCHHHHHHHHHHhCCEEecccccCCHHHCCc-CcEEEEEEeCC
Confidence 99999999999999999999999999999999999 79999998874
No 12
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.5e-58 Score=464.86 Aligned_cols=309 Identities=58% Similarity=0.980 Sum_probs=279.0
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHH-HhCCCChHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKF-LSDQMHPTVIIKAYR 79 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~l-i~~gi~p~~ii~g~~ 79 (362)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++|||++||++|+++ +.+|+||..|++||+
T Consensus 47 ml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~ 126 (590)
T 3p9d_C 47 MLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALK 126 (590)
T ss_dssp EEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred EEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHH
Confidence 6889999999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCC------cccccccccee
Q psy2832 80 SALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESG------RKEIDIKRYAK 153 (362)
Q Consensus 80 ~a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~------~~~~d~~~~i~ 153 (362)
+|++.++++|+ +++++++..|++.|.++|+|++++|.+.+|.+.+++++++|+..+..+... ...+|+.++++
T Consensus 127 ~A~~~a~~~L~-~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~ 205 (590)
T 3p9d_C 127 KALTDALEVIK-QVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVR 205 (590)
T ss_dssp HHHHHHHHHHH-HHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSC
T ss_pred HHHHHHHHHHH-HHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceE
Confidence 99999999999 999999887889999999999999999999999999999999988653211 11456666789
Q ss_pred EEEcCCCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCc
Q psy2832 154 VEKIPGGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENP 233 (362)
Q Consensus 154 i~ki~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ 233 (362)
+.++.|+++.||++++|++|++++.+++|++.++||+|++++++++
T Consensus 206 I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~kIll~d~~Le---------------------------------- 251 (590)
T 3p9d_C 206 VEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLE---------------------------------- 251 (590)
T ss_dssp EEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESCCEECCCCCCS----------------------------------
T ss_pred EEEecCCCcccceeeeEEEEecccCCCCCcceeeeeEEEEEccccc----------------------------------
Confidence 9999999999999999999998776666665555555555555555
Q ss_pred ceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCC
Q psy2832 234 RIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKAN 313 (362)
Q Consensus 234 ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~ 313 (362)
++|+++++.+.+++++++.++...|++ +++++++++.+.+|++|++++||+++|+++|.++|
T Consensus 252 ----------~~K~e~~~~v~Is~~~~l~~il~~E~~--------~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~ 313 (590)
T 3p9d_C 252 ----------YKKGESQTNIEIEKEEDWNRILQIEEE--------QVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG 313 (590)
T ss_dssp ----------CCCCTTTEECCBCSTTHHHHHHHHHHH--------HHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT
T ss_pred ----------ccccccCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc
Confidence 788888889999999999999988887 99999999999999999999999999999999999
Q ss_pred CeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 314 ITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 314 I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
|++++++++.++++||++||+++++++++++++.+|+.|+.|++.++|+
T Consensus 314 I~av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~ 362 (590)
T 3p9d_C 314 CSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGD 362 (590)
T ss_dssp CCCCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETT
T ss_pred ceeeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcC
Confidence 9999999999999999999999999999999999999458888877764
No 13
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=2.8e-57 Score=451.67 Aligned_cols=300 Identities=26% Similarity=0.399 Sum_probs=276.8
Q ss_pred CccCCC--CCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Q psy2832 1 MLMDPM--GGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAY 78 (362)
Q Consensus 1 m~~~~~--g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~ 78 (362)
||+++. |+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+|+||..|++||
T Consensus 38 ml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~ 117 (513)
T 3iyg_B 38 ILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGW 117 (513)
T ss_pred EeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 788998 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCcC---CHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEE
Q psy2832 79 RSALEDMVNILETKVSTPLDKS---DRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVE 155 (362)
Q Consensus 79 ~~a~~~~~~~l~~~~~~~v~~~---~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ 155 (362)
++|++.++++|+ ++++|++.+ +++.|.++|+|++++|.+..|.+++++++++|+..+..+ +|+. .+.+.
T Consensus 118 ~~A~~~a~~~L~-~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~------~d~~-~I~V~ 189 (513)
T 3iyg_B 118 REATKAARQALL-NSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS------GNLE-AIHVI 189 (513)
T ss_pred HHHHHHHHHHHH-HhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhccc------CCcC-eEEEE
Confidence 999999999999 999998743 689999999999999999999999999999999988643 3432 48899
Q ss_pred EcCCCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcce
Q psy2832 156 KIPGGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRI 235 (362)
Q Consensus 156 ki~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki 235 (362)
++.|+++.+|++++|+++++++.++ |++.++||+|++++++++
T Consensus 190 ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~~en~kIll~~~~Le------------------------------------ 232 (513)
T 3iyg_B 190 KKLGGSLADSYLDEGFLLDKKIGVN-QPKRIENAKILIANTGMD------------------------------------ 232 (513)
T ss_pred EeCCCCccceeEEeeEEEeccccCC-CceeecCceEEEEcCCcc------------------------------------
Confidence 9999999999999999999988766 776667777777777666
Q ss_pred eeecccccccccc-cceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCC
Q psy2832 236 VLLDCTLEYKKGE-SQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANI 314 (362)
Q Consensus 236 ~~~~~~~~~~k~~-~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I 314 (362)
++|++ +++++.+++++++..+...|++ +++++++++.+.++++|+++++|++.++++|.++||
T Consensus 233 --------~~k~e~~~~~v~iss~~~l~~~~~~E~~--------~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I 296 (513)
T 3iyg_B 233 --------TDKIKIFGSRVRVDSTAKVAEIEHAEKE--------KMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGV 296 (513)
T ss_pred --------cccccccCCceEEcCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCc
Confidence 77777 7889999999999999988887 999999999999999999999999999999999999
Q ss_pred eEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 315 TAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 315 ~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++++++++.+++|||++||+.+++++++++++++|+ |+.|++.++|+
T Consensus 297 ~av~~~~~~~le~ia~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~ 343 (513)
T 3iyg_B 297 MAIEHADFVGVERLALVTGGEIASTFDHPELVKLGS-CKLIEEVMIGE 343 (513)
T ss_pred eEEecCCHHHHHHHHHHhCCEEecccccCCHhHCCc-ccEEEEEEECC
Confidence 999999999999999999999999999999999999 79999888874
No 14
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=5.7e-58 Score=460.24 Aligned_cols=307 Identities=34% Similarity=0.536 Sum_probs=281.5
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 52 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~ 131 (559)
T 3p9d_A 52 MLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRV 131 (559)
T ss_dssp EECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred EeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-cCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhcc-ccCCccccccccceeEEEcC
Q psy2832 81 ALEDMVNILETK-VSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTV-EESGRKEIDIKRYAKVEKIP 158 (362)
Q Consensus 81 a~~~~~~~l~~~-~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~-~~~~~~~~d~~~~i~i~ki~ 158 (362)
|++.++++|+ + ++++++..|++.|.++|++++++|.+..|.+++++++++|+..+.+ +..+...+|+++ +++.++.
T Consensus 132 A~~~a~~~L~-~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~-I~I~k~~ 209 (559)
T 3p9d_A 132 ALREAIRFIN-EVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKA-VNVLKAH 209 (559)
T ss_dssp HHHHHHHHHH-HHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTC-CCEEEEE
T ss_pred HHHHHHHHHH-HhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhH-eEEEEec
Confidence 9999999999 8 9999987678899999999999999999999999999999999874 222223466654 8899999
Q ss_pred CCCcccceeEeceeeccccCCccCccccc--CceEEEeecccccccCCCccceeeecccccccccccchhhccccCccee
Q psy2832 159 GGTIEDSCVLRGVMLNKDVTHPKMRRRIE--NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236 (362)
Q Consensus 159 g~s~~dS~lv~Giv~~~~~~~~~m~~~~~--~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~ 236 (362)
|+++++|++++|+++++++.+++|++.++ ||+|++++++++
T Consensus 210 Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~Le------------------------------------- 252 (559)
T 3p9d_A 210 GKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQ------------------------------------- 252 (559)
T ss_dssp SSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCCS-------------------------------------
T ss_pred CCCccceeEeccEEEeecccCCCcceeeccCCceEEEEecccc-------------------------------------
Confidence 99999999999999999998888887776 777777777777
Q ss_pred eecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeE
Q psy2832 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITA 316 (362)
Q Consensus 237 ~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~ 316 (362)
++|++.++.+.+++++++.++...|++ ++..+++++.+.++++|+++++|++.|+++|.++||++
T Consensus 253 -------~~k~e~~~~v~is~~~~l~~i~~~E~~--------~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~a 317 (559)
T 3p9d_A 253 -------KARMAMGVQINIDDPEQLEQIRKREAG--------IVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMG 317 (559)
T ss_dssp -------CCCCCTTCCEEECSSSCHHHHHHHHHH--------HHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEE
T ss_pred -------ccccccCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCce
Confidence 777888889999999999999988887 99999999999999999999999999999999999999
Q ss_pred EeeCChhhHHHHHHHhCCeEccCC------CCCCCCCCCCCcceEEEEecCC
Q psy2832 317 IRRVRKSDNNRIARACGATIVNRT------EELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 317 i~~v~~~~l~~la~~tG~~iv~~~------~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++++++.++++||++||+.+++++ ++++++++|+ |+.|++.++|+
T Consensus 318 v~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~-a~~v~~~~ig~ 368 (559)
T 3p9d_A 318 VRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGL-CDEVVQAKFSD 368 (559)
T ss_dssp ESSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCC-EEEEEEEECSS
T ss_pred EccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCcc-ceEEEEEEEcC
Confidence 999999999999999999999999 7888999999 89999988874
No 15
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-57 Score=451.21 Aligned_cols=305 Identities=33% Similarity=0.566 Sum_probs=281.9
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 38 ml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~ 117 (515)
T 3iyg_E 38 MMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQ 117 (515)
T ss_pred EEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCc--CCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcC
Q psy2832 81 ALEDMVNILETKVSTPLDK--SDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIP 158 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~--~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~ 158 (362)
|++.++++|+ +++++++. .|++.|.++|++++++|.+..|.+.+++++++++..+.... +..+|+. ++++.++.
T Consensus 118 A~~~a~~~L~-~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~--~~~~d~~-~I~I~k~~ 193 (515)
T 3iyg_E 118 AARIAIEHLD-KISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQ--RRDVDFE-LIKVEGKV 193 (515)
T ss_pred HHHHHHHHHH-HhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccc--cCCCCcc-cEEEEEec
Confidence 9999999999 99988854 46899999999999999999899999999999998875432 2235553 58999999
Q ss_pred CCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeee
Q psy2832 159 GGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLL 238 (362)
Q Consensus 159 g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~ 238 (362)
|+++.+|++++|++|++++.+|+|++.++++++++++++++
T Consensus 194 Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le--------------------------------------- 234 (515)
T 3iyg_E 194 GGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFE--------------------------------------- 234 (515)
T ss_pred CCCcccceEEeeEEEecccccccccccCCCceEEEEcCccc---------------------------------------
Confidence 99999999999999999998888888777788888888777
Q ss_pred cccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEe
Q psy2832 239 DCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIR 318 (362)
Q Consensus 239 ~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~ 318 (362)
+.+++.++++.+++++++..+...|++ +++.+++++.+.++++|+++++|++.|+++|.++||.+++
T Consensus 235 -----~~k~~~~~~~~is~~~~l~~~~~~E~~--------~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~ 301 (515)
T 3iyg_E 235 -----PPKPKTKHKLDVTSVEDFKALQKYEKE--------KFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVR 301 (515)
T ss_pred -----cccccccceeeeCCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEe
Confidence 667777789999999999999988888 9999999999999999999999999999999999999999
Q ss_pred eCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 319 RVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 319 ~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++++.+++|||++||+.+++++++++++++|+ |+.|+++++|+
T Consensus 302 ~v~k~~le~ia~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~ 344 (515)
T 3iyg_E 302 WVGGPEIELIAIATGGRIVPRFSELTAEKLGF-AGLVKEISFGT 344 (515)
T ss_pred ccCHHHHHHHHHHhCCEEecccccCCHHHCCc-ceEEEEEEecc
Confidence 99999999999999999999999999999999 89999988874
No 16
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4e-57 Score=450.63 Aligned_cols=302 Identities=29% Similarity=0.545 Sum_probs=278.6
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 38 ml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~ 117 (517)
T 3iyg_Z 38 MLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEA 117 (517)
T ss_pred EEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCC
Q psy2832 81 ALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGG 160 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~ 160 (362)
|++.++++|+ +++++++. +++.|.++|++++++|+...|.+.+++++++++..+..+ ...+|++ ++++.++.|+
T Consensus 118 A~~~a~~~L~-~~s~~v~~-~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~---~~~~dl~-~I~I~k~~Gg 191 (517)
T 3iyg_Z 118 AKEKALQFLE-QVKVSKEM-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQ---DEPIDLF-MVEIMEMKHK 191 (517)
T ss_pred HHHHHHHHHH-hhCcCCCC-CHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccC---CCcCChh-HheeeeecCC
Confidence 9999999999 99998875 789999999999999988889999999999999887532 1245664 5899999999
Q ss_pred CcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecc
Q psy2832 161 TIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDC 240 (362)
Q Consensus 161 s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~ 240 (362)
+..+|++++|+++++++.+|+|++.++||+|++++++++
T Consensus 192 ~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le----------------------------------------- 230 (517)
T 3iyg_Z 192 SETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLE----------------------------------------- 230 (517)
T ss_pred CccccceEeeEEEeccCCCCCccccccCCeEEEeccccc-----------------------------------------
Confidence 999999999999999988888887777777777777777
Q ss_pred cccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc---------EEEeCCCCCHHHHHHHHh
Q psy2832 241 TLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPD---------LIFTEKGISDLAQHFLLK 311 (362)
Q Consensus 241 ~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~---------~I~~~~gi~~~~~~~l~~ 311 (362)
++|+++++++.+++++++.++...|++ ++++.+++|...+++ +|+++++|++.++++|.+
T Consensus 231 ---~~k~e~~~~~~i~~~~~l~~~~~~E~~--------~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~ 299 (517)
T 3iyg_Z 231 ---YEKTEVNSGFFYKSAEEREKLVKAERK--------FIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAK 299 (517)
T ss_pred ---ccccccceeEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHH
Confidence 778888889999999999999999888 999999999988877 599999999999999999
Q ss_pred CCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCC-CCCCcceEEEEecCC
Q psy2832 312 ANITAIRRVRKSDNNRIARACGATIVNRTEELREED-VGTGAGLFEIKKVKT 362 (362)
Q Consensus 312 ~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~-lG~~~~~~~~~~~~~ 362 (362)
+||++++++++.+++|||++||+.+++++++++++. +|+ |+ +++.++|+
T Consensus 300 ~gI~~v~~v~~~~leria~~tGa~iv~~l~~l~~~~~LG~-a~-v~e~~ig~ 349 (517)
T 3iyg_Z 300 EGIIALRRAKRRNMERLTLACGGIALNSLDDLNPDCLLGH-AG-VYEYTLGE 349 (517)
T ss_pred CCCEEEEecCHHHHHHHHHHhCCEEecchhhCcccccCCc-ce-EEEEEEcC
Confidence 999999999999999999999999999999999999 999 68 88888774
No 17
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6.2e-57 Score=453.50 Aligned_cols=304 Identities=26% Similarity=0.468 Sum_probs=273.9
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||+++++++.+|+||..|++||++
T Consensus 54 ml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~ 133 (568)
T 3p9d_H 54 IIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNM 133 (568)
T ss_dssp EEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred EEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCC--CcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhcccc---CCccccccccceeEE
Q psy2832 81 ALEDMVNILETKVSTPL--DKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEE---SGRKEIDIKRYAKVE 155 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v--~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~---~~~~~~d~~~~i~i~ 155 (362)
|++.++++|+ +++.++ +..+++.|.++|++++++|+...+ +++++++++|+..+..+. .+...+|+. .+.+.
T Consensus 134 A~~~a~e~L~-~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~-~I~I~ 210 (568)
T 3p9d_H 134 ARKFTLKELD-EMVVGEITDKNDKNELLKMIKPVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVD-SIRVV 210 (568)
T ss_dssp HHHHHHHHHH-HHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGG-GCEEE
T ss_pred HHHHHHHHHH-HhccccCCCCCCHHHHHHHHHHHhhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccc-eEEEE
Confidence 9999999999 888876 556899999999999999999888 999999999999886531 122246664 58899
Q ss_pred EcCCCCcccceeEeceeeccccCCccCccccc---CceEEEeecccccccCCCccceeeecccccccccccchhhccccC
Q psy2832 156 KIPGGTIEDSCVLRGVMLNKDVTHPKMRRRIE---NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIEN 232 (362)
Q Consensus 156 ki~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~---~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~ 232 (362)
++.|++++||++++|+++++++. .|++.++ ||+|++++++++
T Consensus 211 k~~Ggs~~dS~lv~G~v~dk~~~--~m~~~i~~~~n~kIlll~~~Le--------------------------------- 255 (568)
T 3p9d_H 211 KIMGGSLSNSTVIKGMVFNREPE--GHVKSLSEDKKHKVAVFTCPLD--------------------------------- 255 (568)
T ss_dssp EEESSCGGGCEEESSCCBSSCBS--SGGGSCCCCSSCEEEEECSCSS---------------------------------
T ss_pred EccCCCcchheeeccEEEeeccc--CCcEEEecCCcceEEEEccCcc---------------------------------
Confidence 99999999999999999998763 4565555 566665555555
Q ss_pred cceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhC
Q psy2832 233 PRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKA 312 (362)
Q Consensus 233 ~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~ 312 (362)
++|+++++++.+++++++..+...|++ +++++++++.+.++++|+++++|++.++++|.++
T Consensus 256 -----------~~k~e~~~~v~i~~~~~l~~~~~~E~~--------~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~ 316 (568)
T 3p9d_H 256 -----------IANTETKGTVLLHNAQEMLDFSKGEEK--------QIDAMMKEIADMGVECIVAGAGVGELALHYLNRY 316 (568)
T ss_dssp -----------SCCCSSSCEEECCSHHHHHHHHHHHHH--------HHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH
T ss_pred -----------ccccccCceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC
Confidence 788888899999999999999988887 9999999999999999999999999999999999
Q ss_pred CCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 313 NITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 313 ~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
||++++++++.+++|||++||+.+++++++++++.+|+ |+.|++.++|+
T Consensus 317 gI~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~ 365 (568)
T 3p9d_H 317 GILVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGL-VETVKTMEIGG 365 (568)
T ss_dssp TCEEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEE-CSCCCCCEETT
T ss_pred CeEEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEecC
Confidence 99999999999999999999999999999999999999 79998888764
No 18
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.7e-57 Score=456.07 Aligned_cols=305 Identities=29% Similarity=0.525 Sum_probs=274.4
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++||+++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 52 ml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~ 131 (550)
T 3p9d_G 52 LIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRK 131 (550)
T ss_dssp EEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHH
T ss_pred EEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCC---HHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEc
Q psy2832 81 ALEDMVNILETKVSTPLDKSD---RSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKI 157 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~---~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki 157 (362)
|++.++++|+ +++++++..| ++.|.++|++++++|+++.|.+++++++++|+..+.. +++|++ ++.+.++
T Consensus 132 A~~~a~~~L~-~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~-----~~~dl~-~I~Vikv 204 (550)
T 3p9d_G 132 AVSLAVEKIN-ELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDR-----NDLDDK-LIGIKKI 204 (550)
T ss_dssp HHHHHHHHHH-HSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCS-----SSCCGG-GCCCCBC
T ss_pred HHHHHHHHHH-HhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCc-----cccCch-heeEEEe
Confidence 9999999999 9999997666 8899999999999999999999999999999998853 135553 5888899
Q ss_pred CCCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceee
Q psy2832 158 PGGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVL 237 (362)
Q Consensus 158 ~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~ 237 (362)
.|+++++|++++|++|++++.+++|+ +||++++||||++
T Consensus 205 ~Gg~~~ds~lv~G~~~dk~~~s~yf~-----------------------------------------~~~~~~en~kIll 243 (550)
T 3p9d_G 205 PGGAMEESLFINGVAFKKTFSYAGFE-----------------------------------------QQPKKFNNPKILS 243 (550)
T ss_dssp CSSCGGGCCCCSSEEECCCSSCTTCS-----------------------------------------CSCSCCSSCCEEE
T ss_pred cCCCccceeEEeeEEEeccccccccc-----------------------------------------cCcccccCceEEE
Confidence 99999999999999999988776321 2333445555555
Q ss_pred ecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEE
Q psy2832 238 LDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAI 317 (362)
Q Consensus 238 ~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i 317 (362)
+||+++++|++.++++.+++++++..+...|++ +++++++++.+.++++|+++++|++++++||.++||+++
T Consensus 244 ~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~--------~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v 315 (550)
T 3p9d_G 244 LNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQ--------LIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCA 315 (550)
T ss_dssp ECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHH--------HHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEE
T ss_pred eccccccccccccceeeeCCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccc
Confidence 555555888889999999999999999988887 999999999999999999999999999999999999999
Q ss_pred eeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 318 RRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 318 ~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
+++++.+++|||++||+.+++++++++++.+|+ |+.|++.++|+
T Consensus 316 ~~v~k~~lerIa~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~ 359 (550)
T 3p9d_G 316 GRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGT-CALFEEMQIGS 359 (550)
T ss_dssp ECCCTTHHHHHHHHTCCCCBSSGGGCCGGGCCC-CSBCCCCCCSS
T ss_pred cCcCHHHHHHHHHHhCCceecchhhCCHHHcCC-ceEEEEEEeCC
Confidence 999999999999999999999999999999999 79999888763
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.4e-56 Score=450.36 Aligned_cols=304 Identities=29% Similarity=0.533 Sum_probs=276.8
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 73 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~ 152 (562)
T 3p9d_E 73 ILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDE 152 (562)
T ss_dssp EEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred EEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCC----HHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEE
Q psy2832 81 ALEDMVNILETKVSTPLDKSD----RSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEK 156 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~----~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~k 156 (362)
|++.++++|+ +++++++..+ ++.|.++|++++++|.+..|.+.+++++++++..+.... ++.+|+. ++++.+
T Consensus 153 A~~~a~~~L~-~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~--~~~~d~~-~I~I~k 228 (562)
T 3p9d_E 153 AAKLAISKLE-ETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKD--RKDVDFD-LIKMQG 228 (562)
T ss_dssp HHHHHHHHTT-TTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTT--CSCCCCC-CCEEEE
T ss_pred HHHHHHHHHH-HhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccc--cCCCCcc-cEEEEE
Confidence 9999999999 9999987532 389999999999999999999999999999998875432 2245653 589999
Q ss_pred cCCCCcccceeEeceeeccccCCccCcccc------cCceEEEeecccccccCCCccceeeecccccccccccchhhccc
Q psy2832 157 IPGGTIEDSCVLRGVMLNKDVTHPKMRRRI------ENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRI 230 (362)
Q Consensus 157 i~g~s~~dS~lv~Giv~~~~~~~~~m~~~~------~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i 230 (362)
+.|+++.+|++++|+++++++.+++|++.+ +++++++++++++
T Consensus 229 ~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le------------------------------- 277 (562)
T 3p9d_E 229 RVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFE------------------------------- 277 (562)
T ss_dssp ESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEESCCS-------------------------------
T ss_pred ecCCChhhhceeeeEEEecCCCCCCcCcccccccccccceEEEeccccc-------------------------------
Confidence 999999999999999999999998888766 5555555555555
Q ss_pred cCcceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHH
Q psy2832 231 ENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLL 310 (362)
Q Consensus 231 ~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~ 310 (362)
+.+++.++++.+++++++.++...|++ +++.+++++.+.++++|+++++|++.|+++|.
T Consensus 278 -------------~~k~~~~~~~~Iss~~~~~~~~~~E~~--------~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~ 336 (562)
T 3p9d_E 278 -------------PPKPKTKHKLDISSVEEYQKLQTYEQD--------KFKEMIDDVKKAGADVVICQWGFDDEANHLLL 336 (562)
T ss_dssp -------------SCCCSSCCCCCCCSSSHHHHHHHHHHH--------HHHHHHHHHHHHTCSCCEECSSCCSHHHHHHH
T ss_pred -------------ccccccCceEEECCHHHHHHHHHHHHH--------HHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHH
Confidence 777777788889999999999988887 99999999999999999999999999999999
Q ss_pred hCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecC
Q psy2832 311 KANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVK 361 (362)
Q Consensus 311 ~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~ 361 (362)
++||.+++++++.+++|||++||+.+++++++++++++|+ |+.|+++++|
T Consensus 337 ~~~I~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~-a~~v~~~~ig 386 (562)
T 3p9d_E 337 QNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGT-CSRIYEQEFG 386 (562)
T ss_dssp TTTCCCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEE-CSCEEEECCS
T ss_pred HCCCEEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEec
Confidence 9999999999999999999999999999999999999999 7999998887
No 20
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=7.7e-57 Score=451.64 Aligned_cols=305 Identities=28% Similarity=0.481 Sum_probs=274.4
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 45 ml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~ 124 (546)
T 3p9d_F 45 MLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEI 124 (546)
T ss_dssp EEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHH
T ss_pred EEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCc--CCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcC
Q psy2832 81 ALEDMVNILETKVSTPLDK--SDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIP 158 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~--~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~ 158 (362)
|++.++++|+ +++++++. .+++.|.++|++++++|+...|.+.+++++++++..+..... ..+|++ ++++.++.
T Consensus 125 A~~~a~~~L~-~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~--~~~dl~-~I~i~ki~ 200 (546)
T 3p9d_F 125 ARKESMKFLD-EFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQA--DNLDLH-MVEIMQMQ 200 (546)
T ss_dssp HHHHHHHHHH-HHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHH--TTCCGG-GEEEECCC
T ss_pred HHHHHHHHHH-HhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCC--Ccccch-heEEEEec
Confidence 9999999999 99998864 578999999999999998888899999999999988753221 235554 58999999
Q ss_pred CCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeee
Q psy2832 159 GGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLL 238 (362)
Q Consensus 159 g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~ 238 (362)
|++..+|++++|+++++++.++.|++.++||+|++++++++
T Consensus 201 Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le--------------------------------------- 241 (546)
T 3p9d_F 201 HLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLE--------------------------------------- 241 (546)
T ss_dssp CSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSS---------------------------------------
T ss_pred CCCccccEEEeeEEEecccccccCcceecCceEEEecCccc---------------------------------------
Confidence 99999999999999999887777766666666666666666
Q ss_pred cccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCC----------CcEEEeCCCCCHHHHHH
Q psy2832 239 DCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALK----------PDLIFTEKGISDLAQHF 308 (362)
Q Consensus 239 ~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~----------v~~I~~~~gi~~~~~~~ 308 (362)
++|++.++++.+++++++.++...|++ ++++++++|+..+ +++|+++++|++.|+++
T Consensus 242 -----~~k~e~~~~~~i~~~~~~~~~~~~E~~--------~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~ 308 (546)
T 3p9d_F 242 -----YEKTEVNSGFFYSSADQRDKLAASERK--------FVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDV 308 (546)
T ss_dssp -----SCCCSSCBCCCCCSSSCHHHHHHHHHH--------HHHHHHHHHHHCC-----------CEEEESSCCCHHHHHH
T ss_pred -----ccccccCceEEEcCHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHH
Confidence 778888889999999999999988887 8888999988754 45999999999999999
Q ss_pred HHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 309 LLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 309 l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
|.++||++++++++.+++|||++||+.+++++++++++.+|+ |+.|+++++|+
T Consensus 309 L~~~gI~~vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~ 361 (546)
T 3p9d_F 309 FAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGF-SGLVYQETIGE 361 (546)
T ss_dssp HTTTTCEEECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBC-CCCBCBCCCSS
T ss_pred HHHCCCeeEecCCHHHHHHHHHHhCCEEecchhhCCHhHCCc-ccEEEEEEecC
Confidence 999999999999999999999999999999999999999999 79988887764
No 21
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-55 Score=437.83 Aligned_cols=301 Identities=26% Similarity=0.403 Sum_probs=274.2
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+|+||..|++||++
T Consensus 39 ml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~ 118 (512)
T 3iyg_Q 39 MVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEI 118 (512)
T ss_pred EEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCC--CCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcC
Q psy2832 81 ALEDMVNILETKVST--PLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIP 158 (362)
Q Consensus 81 a~~~~~~~l~~~~~~--~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~ 158 (362)
|++.++++|+ +++. +.+..|++.|.++|++++++|... +.+++++++++|+..+..+ ++ .+|++ .+++.++.
T Consensus 119 A~~~a~~~L~-~~~~~~~~~~~~~~~l~~va~tsl~sK~~~-~~~~i~~livdAv~~V~~~-~~--~i~v~-~I~i~k~~ 192 (512)
T 3iyg_Q 119 ACKKAHEILP-DLVCCSAKNLRDVDEVSSLLHTSVMSKQYG-NEVFLAKLIAQACVSIFPD-SG--HFNVD-NIRVCKIL 192 (512)
T ss_pred HHHHHHHHHH-HhhcccCCCCCCHHHHHHHHHHHhCCCCcc-chHHHHHHHHHHHHHHhcc-CC--cccHh-HeeEeecc
Confidence 9999999999 8744 455568999999999999999764 6789999999999988643 11 35554 48899999
Q ss_pred CCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeee
Q psy2832 159 GGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLL 238 (362)
Q Consensus 159 g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~ 238 (362)
|+++.+|++++|++|++++.+ |++.++|++|++++++++
T Consensus 193 Ggs~~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le--------------------------------------- 231 (512)
T 3iyg_Q 193 GSGVHSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFD--------------------------------------- 231 (512)
T ss_pred CCCcccceEEeeEEEecCcCC--CCcccccCceEEEecccc---------------------------------------
Confidence 999999999999999998754 777777777777777776
Q ss_pred cccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEe
Q psy2832 239 DCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIR 318 (362)
Q Consensus 239 ~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~ 318 (362)
+.+++.++.+.+++++++..+...|++ +++++++++.+.++++|+++++|+++++++|.+.||++++
T Consensus 232 -----~~~~e~k~~v~Is~~~~l~~~~~~E~~--------~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~ 298 (512)
T 3iyg_Q 232 -----GMITETKGTVLIKSAEELMNFSKGEEN--------LMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVR 298 (512)
T ss_pred -----cccccccceEEeCCHHHHHHHHHHHHH--------HHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEE
Confidence 667777889999999999999988887 9999999999999999999999999999999999999999
Q ss_pred eCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 319 RVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 319 ~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++++.+++|||++||+.+++++++++++++|+ |+.|++.++|+
T Consensus 299 ~~~~~dle~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~~g~ 341 (512)
T 3iyg_Q 299 LNSKWDLRRLCKTVGATALPRLNPPVLEEMGH-CDSVYLSEVGD 341 (512)
T ss_pred eCCHHHHHHHHHHhCCEEecccccCCHHHCCc-ccEEEEEEeCC
Confidence 99999999999999999999999999999999 89999998875
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=5.2e-55 Score=436.96 Aligned_cols=300 Identities=27% Similarity=0.431 Sum_probs=270.2
Q ss_pred CccC-CCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhC-CCChHHHHHHH
Q psy2832 1 MLMD-PMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSD-QMHPTVIIKAY 78 (362)
Q Consensus 1 m~~~-~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~-gi~p~~ii~g~ 78 (362)
||++ +.|+++|||||+|||++|+++||+|||++++|++|++++||||||++|||++||++|++++.+ |+||..|++||
T Consensus 45 ml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~ 124 (527)
T 3p9d_B 45 LLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGY 124 (527)
T ss_dssp EEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHH
T ss_pred EEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 6888 799999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCcCC---HHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEE
Q psy2832 79 RSALEDMVNILETKVSTPLDKSD---RSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVE 155 (362)
Q Consensus 79 ~~a~~~~~~~l~~~~~~~v~~~~---~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ 155 (362)
++|++.++++|+ +++++++.++ ++.|.++|++++++|.+..|.+.+++++++|+..+..+. |+ +.+.+.
T Consensus 125 ~~A~~~a~~~L~-~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~------~~-~~I~V~ 196 (527)
T 3p9d_B 125 RLASAAALDALT-KAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGST------NL-EHIQII 196 (527)
T ss_dssp HHHHHHHHHHHH-HTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTC------CT-TSSCCC
T ss_pred HHHHHHHHHHHH-HhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccC------Cc-ceEEEE
Confidence 999999999999 9999987533 789999999999999999999999999999999886431 22 237788
Q ss_pred EcCCCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcce
Q psy2832 156 KIPGGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRI 235 (362)
Q Consensus 156 ki~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki 235 (362)
++.|+++++|++++|++|++++.+++ ++.++||+|++++++++
T Consensus 197 k~~gg~~~ds~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~~le------------------------------------ 239 (527)
T 3p9d_B 197 KILGGKLSDSFLDEGFILAKKFGNNQ-PKRIENAKILIANTTLD------------------------------------ 239 (527)
T ss_dssp BCCCSSSSCCCEESSCCCSCCCSSSC-CSCCSSCEEEEECSCSS------------------------------------
T ss_pred EcCCCCccccEEEEeEEEecccCCCC-CeeeecceEEEeccccc------------------------------------
Confidence 88899999999999999999887765 65666677777666666
Q ss_pred eeecccccccccc-cceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCC
Q psy2832 236 VLLDCTLEYKKGE-SQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANI 314 (362)
Q Consensus 236 ~~~~~~~~~~k~~-~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I 314 (362)
++|++ ++..+.+++++++..+...|++ +++..++++.+.++++|+++++|++.++++|.++||
T Consensus 240 --------~~k~~~~~~~v~i~~~~~l~~~~~~E~~--------~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i 303 (527)
T 3p9d_B 240 --------TDKVKIFGTKFKVDSTAKLAQLEKAERE--------KMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGI 303 (527)
T ss_dssp --------CCCCSSCCCBCCCCHHHHHHHHHHHHHH--------HHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCB
T ss_pred --------cccccccCceEEEcCHHHHHHHHHHHHH--------HHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCC
Confidence 56666 4667788899999999988887 999999999999999999999999999999999999
Q ss_pred eEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 315 TAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 315 ~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
++++++++.+++++|++||+.+++++++++++.+|+ |+.|+++++|+
T Consensus 304 ~av~~~~~~dle~ia~~tGa~iv~~~~~~~~~~LG~-a~~v~~~~ig~ 350 (527)
T 3p9d_B 304 NSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGE-CDVIEEIMLGE 350 (527)
T ss_dssp CCCCCCHHHHHHHHHHHTCCCCCSTTSCCTTSCEEC-SBCCBCCCSSS
T ss_pred EEEecCCHHHHHHHHHHhCCEEecchhhCCHHHCCC-CcEEEEEEecc
Confidence 999999999999999999999999999999999999 79998887763
No 23
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=5e-44 Score=356.90 Aligned_cols=267 Identities=24% Similarity=0.334 Sum_probs=231.3
Q ss_pred CccCCCCCeEEeccHHHHHhhccccCh----hhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHP----AGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIK 76 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP----~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~ 76 (362)
||+++.|+++|||||+|||++|+++|| +|||++++|++|++++||||||++|||++||+++++++.+|+||..|++
T Consensus 38 mi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~ 117 (547)
T 1kp8_A 38 VLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKR 117 (547)
T ss_dssp EECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 688999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEE
Q psy2832 77 AYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEK 156 (362)
Q Consensus 77 g~~~a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~k 156 (362)
||++|++.++++|+ ++++|++ +++.|.++|+++++ |.+++++++++|+..+..+ + .+.+.
T Consensus 118 G~~~A~~~a~~~L~-~~s~~v~--~~e~l~~vA~iS~~------~~~~i~~liadAv~~V~~d--g--------~I~Ve- 177 (547)
T 1kp8_A 118 GIDKAVTVAVEELK-ALSVPCS--DSKAIAQVGTISAN------SDETVGKLIAEAMDKVGKE--G--------VITVE- 177 (547)
T ss_dssp HHHHHHHHHHHHHH-HHCBCCC--SHHHHHHHHHHHTT------SCHHHHHHHHHHHHHHCTT--S--------EEEEE-
T ss_pred HHHHHHHHHHHHHH-HhCcCCC--CHHHHHHHHHHhcc------chhHHHHHHHHHHHHhCcC--C--------cEEEE-
Confidence 99999999999999 9999986 78999999998864 4588999999999988532 1 13444
Q ss_pred cCCCCcccc-eeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcce
Q psy2832 157 IPGGTIEDS-CVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRI 235 (362)
Q Consensus 157 i~g~s~~dS-~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki 235 (362)
.|+++.+| ++++|++|++++.+|+|+... ..||+.++||+|
T Consensus 178 -~G~~~~ds~~lveG~~fdkg~~~p~~vt~~-------------------------------------~~m~~~lenp~I 219 (547)
T 1kp8_A 178 -DGTGLQDELDVVEGMQFDRGYLSPYFINKP-------------------------------------ETGAVELESPFI 219 (547)
T ss_dssp -CCSSSSCEEEEESCEEESCCBSSTTCCSBT-------------------------------------TTTBEEEESCEE
T ss_pred -eCCccccccEEEecEEEecCccccccccCc-------------------------------------ccCceEecCceE
Confidence 79999888 999999999999887764210 136677888888
Q ss_pred eeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhC---
Q psy2832 236 VLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKA--- 312 (362)
Q Consensus 236 ~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~--- 312 (362)
+++|+ + +++++ .+...++++.+.++++|+++++|++.|+++|..+
T Consensus 220 ll~d~-----------~--Is~~~-------------------~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~ir 267 (547)
T 1kp8_A 220 LLADK-----------K--ISNIR-------------------EMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMR 267 (547)
T ss_dssp ECEES-----------E--ECCGG-------------------GTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGG
T ss_pred EEEcC-----------c--CCCHH-------------------HHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccc
Confidence 88888 2 22222 3345567789999999999999999999999984
Q ss_pred ---CCeEEe-----eCChhhHHHHHHHhCCeEccC-----CCCCCCCCCCCCcceEEEE
Q psy2832 313 ---NITAIR-----RVRKSDNNRIARACGATIVNR-----TEELREEDVGTGAGLFEIK 358 (362)
Q Consensus 313 ---~I~~i~-----~v~~~~l~~la~~tG~~iv~~-----~~~~~~~~lG~~~~~~~~~ 358 (362)
+|++++ ++++.++++||++||+.++++ +++++++.+|+ |+.+++.
T Consensus 268 g~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~-a~~v~~~ 325 (547)
T 1kp8_A 268 GIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ-AKRVVIN 325 (547)
T ss_dssp TSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE-EEEEEEC
T ss_pred cceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc-eeEEEEc
Confidence 567777 888999999999999999996 99999999999 7888763
No 24
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.2e-43 Score=354.66 Aligned_cols=266 Identities=21% Similarity=0.323 Sum_probs=230.0
Q ss_pred CccCCCCCeEEeccHHHHHhhccccCh----hhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHP----AGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIK 76 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP----~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~ 76 (362)
||+++.|+++|||||+|||++|+++|| +|||++++|++|++++||||||++|||++||+++++++.+|+||..|++
T Consensus 38 mi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~ 117 (543)
T 1we3_A 38 VLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKR 117 (543)
T ss_dssp EECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 688999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEE
Q psy2832 77 AYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEK 156 (362)
Q Consensus 77 g~~~a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~k 156 (362)
||++|++.++++|+ +++++++ +++.|.++|+++++ .+.+++++++|+..+..+ + .+.+.
T Consensus 118 G~~~A~~~a~~~L~-~~s~~v~--~~~~l~~vA~iS~~-------~~~i~~li~dAv~~V~~~--g--------~I~Ve- 176 (543)
T 1we3_A 118 GIEKAVEAAVEKIK-ALAIPVE--DRKAIEEVATISAN-------DPEVGKLIADAMEKVGKE--G--------IITVE- 176 (543)
T ss_dssp HHHHHHHHHHHHHH-HTCBCCC--SHHHHHHHHHHHHT-------CHHHHHHHHHHHHTTCTT--S--------EEEEE-
T ss_pred HHHHHHHHHHHHHH-HhcccCC--CHHHHHHhhhhhcC-------CHHHHHHHHHHHHHhCcC--C--------cEEEe-
Confidence 99999999999999 9999986 78999999998875 477899999999988532 1 13444
Q ss_pred cCCCCcccc-eeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcce
Q psy2832 157 IPGGTIEDS-CVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRI 235 (362)
Q Consensus 157 i~g~s~~dS-~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki 235 (362)
.|+++++| ++++|+++++++.++.|+.. ...|++.++||+|
T Consensus 177 -~G~~~~ds~~lv~G~~~dkg~~~p~~vt~-------------------------------------~~~m~~~~en~~I 218 (543)
T 1we3_A 177 -ESKSLETELKFVEGYQFDKGYISPYFVTN-------------------------------------PETMEAVLEDAFI 218 (543)
T ss_dssp -ECSSSSCEEEEECSEEESCCBSSGGGCSB-------------------------------------TTTTBCCEEEEEE
T ss_pred -cCCccccceEEEcCEEEecCccccccccC-------------------------------------cccCceeecCceE
Confidence 68899888 99999999999988765321 0135667788888
Q ss_pred eeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHh----
Q psy2832 236 VLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLK---- 311 (362)
Q Consensus 236 ~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~---- 311 (362)
+++|+. +++.+ .+...++++.+.++++|+++++|++.|+++|..
T Consensus 219 ll~d~~-------------Is~~~-------------------~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~ir 266 (543)
T 1we3_A 219 LIVEKK-------------VSNVR-------------------ELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLR 266 (543)
T ss_dssp EEESSC-------------BCCHH-------------------HHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHH
T ss_pred EEECCC-------------cCCHH-------------------HHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccc
Confidence 888872 12221 445567888999999999999999999999998
Q ss_pred --CCCeEEe-----eCChhhHHHHHHHhCCeEccC-----CCCCCCCCCCCCcceEEEE
Q psy2832 312 --ANITAIR-----RVRKSDNNRIARACGATIVNR-----TEELREEDVGTGAGLFEIK 358 (362)
Q Consensus 312 --~~I~~i~-----~v~~~~l~~la~~tG~~iv~~-----~~~~~~~~lG~~~~~~~~~ 358 (362)
.+|++++ ++++.++++||++||+.++++ +++++++.+|+ |+.+++.
T Consensus 267 g~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~-a~~v~~~ 324 (543)
T 1we3_A 267 GTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR-AERVRIT 324 (543)
T ss_dssp TSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE-EEEEEEC
T ss_pred cceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC-ceEEEEE
Confidence 5678887 788999999999999999996 89999999999 7888763
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3.4e-44 Score=358.29 Aligned_cols=267 Identities=22% Similarity=0.320 Sum_probs=201.4
Q ss_pred CccCCCCCeEEeccHHHHHhhccccCh----hhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHP----AGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIK 76 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP----~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~ 76 (362)
||+++.|+++|||||+|||++|+++|| +|||++++|++|++++||||||++|||++||+++++++.+|+||..|++
T Consensus 39 mi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~ 118 (545)
T 1iok_A 39 VIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKR 118 (545)
T ss_dssp EECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 688999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEE
Q psy2832 77 AYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEK 156 (362)
Q Consensus 77 g~~~a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~k 156 (362)
||++|++.++++|+ ++++|++ +++.|.++|+++++ +.+.+++++++|+..+..+ + . +.+.
T Consensus 119 G~~~A~~~a~~~L~-~~s~~v~--~~e~l~~va~iS~~------~~~~i~~li~dAv~~V~~~--g--~------I~Ve- 178 (545)
T 1iok_A 119 GIDVATAKVVEAIK-SAARPVN--DSSEVAQVGTISAN------GESFIGQQIAEAMQRVGNE--G--V------ITVE- 178 (545)
T ss_dssp HHHHHHHHHHHHHH-TTCBCCC--STTTTTHHHHHTTT------TCHHHHHHHHHHHHHHCTT--S--C------CCCE-
T ss_pred HHHHHHHHHHHHHH-HhcccCC--CHHHHHHHHHhhcC------CchhHHHHHHHHHHHhccC--C--e------EEEE-
Confidence 99999999999999 9999986 67889999988864 4578999999999988532 1 1 3333
Q ss_pred cCCCCcccc-eeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcce
Q psy2832 157 IPGGTIEDS-CVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRI 235 (362)
Q Consensus 157 i~g~s~~dS-~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki 235 (362)
.|+++.+| ++++|+++++++.+|+|+.. + ..||+.++||+|
T Consensus 179 -~G~~~~ds~~lveG~~~dkg~~~p~~vt~---~----------------------------------~~m~~~~en~~I 220 (545)
T 1iok_A 179 -ENKGMETEVEVVEGMQFDRGYLSPYFVTN---A----------------------------------DKMIAELEDAYI 220 (545)
T ss_dssp -ECSSSCCEEEEECCEECSCCCSCGGGCCC---S----------------------------------SSSCEEEEEEEE
T ss_pred -eCCccccceEEEecEEEecCccccccccC---c----------------------------------ccCceeecCCeE
Confidence 68899888 99999999999988765421 0 135566777777
Q ss_pred eeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhC---
Q psy2832 236 VLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKA--- 312 (362)
Q Consensus 236 ~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~--- 312 (362)
+++|+.++ +++ .+...++++.+.++++|+++++|++.|+++|..+
T Consensus 221 ll~d~~I~-------------~~~-------------------~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~ir 268 (545)
T 1iok_A 221 LLHEKKLS-------------SLQ-------------------PMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLR 268 (545)
T ss_dssp EECSSCBC-------------CCC-------------------C-----------CCCCEEEESCBC-------------
T ss_pred EEEcCCcC-------------CHH-------------------HHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHcccc
Confidence 77777321 111 2334466788999999999999999999999985
Q ss_pred ---CCeEEe-----eCChhhHHHHHHHhCCeEccC-----CCCCCCCCCCCCcceEEEE
Q psy2832 313 ---NITAIR-----RVRKSDNNRIARACGATIVNR-----TEELREEDVGTGAGLFEIK 358 (362)
Q Consensus 313 ---~I~~i~-----~v~~~~l~~la~~tG~~iv~~-----~~~~~~~~lG~~~~~~~~~ 358 (362)
+|++++ ++++.++++||++||+.++++ +++++++.+|+ |+.|++.
T Consensus 269 g~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~-a~~v~~~ 326 (545)
T 1iok_A 269 GGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR-AKKVSIN 326 (545)
T ss_dssp ----CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE-EEEEEEC
T ss_pred ccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc-CcEEEEe
Confidence 557777 888999999999999999997 99999999999 7888764
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=5.4e-43 Score=348.60 Aligned_cols=266 Identities=19% Similarity=0.271 Sum_probs=194.6
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChh----hHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPA----GKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIK 76 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~----akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~ 76 (362)
||+++.|+++|||||+|||++|+++||+ |||++++|++|++++||||||++|||++||+++++++.+|+||..|++
T Consensus 38 ml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~ 117 (546)
T 3rtk_A 38 VLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKR 117 (546)
T ss_dssp -----------------------CCCHHHHHHHHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 7888999999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEE
Q psy2832 77 AYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEK 156 (362)
Q Consensus 77 g~~~a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~k 156 (362)
||++|++.++++|+ ++++|++ +++.|.++|+++++ .+.+++++++|+..+..+ + .+.+.+
T Consensus 118 G~~~A~~~a~e~L~-~~s~~v~--~~e~L~~vA~iS~~-------~~~i~~liadAv~~V~~d--g--------vI~Ve~ 177 (546)
T 3rtk_A 118 GIEKAVEKVTETLL-KGAKEVE--TKEQIAATAAISAG-------DQSIGDLIAEAMDKVGNE--G--------VITVEE 177 (546)
T ss_dssp HHHHHHHHHHHHHH-HTCBCCC--SHHHHHHHHHHHHT-------CHHHHHHHHHHHHHSCTT--S--------EEEEEC
T ss_pred HHHHHHHHHHHHHH-HhcccCC--ChHHHHhHeEEeCC-------chHHHHHHHHHHHHhccC--C--------ceEEEe
Confidence 99999999999999 9999987 78999999998875 356889999999987542 1 145554
Q ss_pred cCCCCcccceeEeceeeccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCccee
Q psy2832 157 IPGGTIEDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIV 236 (362)
Q Consensus 157 i~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~ 236 (362)
.. +...+|++++|++|++++.+|.|+.. ..+||+.++||+|+
T Consensus 178 ~~-~~~~ds~lveGm~fdkg~~sp~~vt~-------------------------------------~e~m~~~len~kIl 219 (546)
T 3rtk_A 178 SN-TFGLQLELTEGMRFDKGYISGYFVTD-------------------------------------PERQEAVLEDPYIL 219 (546)
T ss_dssp CS-SSSCEEEEECEEEESCCBSSGGGCSB-------------------------------------TTTTBEEEESCEEE
T ss_pred cC-CcccceEEeeeEEEcCCccCcccccC-------------------------------------cccCeeEecccEEE
Confidence 32 33457999999999999988765421 01467778888888
Q ss_pred eecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCC---
Q psy2832 237 LLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKAN--- 313 (362)
Q Consensus 237 ~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~--- 313 (362)
++|+ + +++++ .+...++++.+.++++++++++|++.|+++|..++
T Consensus 220 l~d~-----------k--Is~~~-------------------~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg 267 (546)
T 3rtk_A 220 LVSS-----------K--VSTVK-------------------DLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRG 267 (546)
T ss_dssp EBSS-----------E--ECCST-------------------TTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHS
T ss_pred EECC-----------c--cCCHH-------------------HHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCC
Confidence 8887 2 22222 33445788999999999999999999999998643
Q ss_pred ---CeEEe-----eCChhhHHHHHHHhCCeEcc-----CCCCCCCCCCCCCcceEEE
Q psy2832 314 ---ITAIR-----RVRKSDNNRIARACGATIVN-----RTEELREEDVGTGAGLFEI 357 (362)
Q Consensus 314 ---I~~i~-----~v~~~~l~~la~~tG~~iv~-----~~~~~~~~~lG~~~~~~~~ 357 (362)
+.+++ +.++.++++||++||+.+++ ++++++++.+|+ |+.|++
T Consensus 268 ~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~-a~~v~i 323 (546)
T 3rtk_A 268 TFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK-ARKVVV 323 (546)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE-EEEEEE
T ss_pred ceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe-eEEEEE
Confidence 45554 33478899999999999999 689999999999 788875
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.98 E-value=3e-32 Score=234.75 Aligned_cols=149 Identities=66% Similarity=1.060 Sum_probs=130.1
Q ss_pred ccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy2832 206 QTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCN 285 (362)
Q Consensus 206 ~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 285 (362)
++||++++|++|++.+.|++||++++||||++++|+++++|+++++++.+++++++.++...|++ +++++++
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~--------~l~~~v~ 72 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEE--------YIHQLCE 72 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHH--------HHHHHHH
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHH--------HHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999998888 9999999
Q ss_pred HHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 286 DIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 286 ~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
+|.+.++|+|++++||+++|++||.++||++++++++.+++|||++|||.+++++++++++.+|+||+.|+++++|+
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~ 149 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGD 149 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETT
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999985
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.97 E-value=3.3e-31 Score=223.82 Aligned_cols=142 Identities=32% Similarity=0.501 Sum_probs=138.3
Q ss_pred ecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCC
Q psy2832 212 VNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALK 291 (362)
Q Consensus 212 ~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~ 291 (362)
++|++|++.+.|++||++++||||++++|+++++|+++++++.+++++++.++...|++ ++++++++|.+.+
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~--------~l~~~v~kI~~~g 72 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETN--------TFKQMVEKIKKSG 72 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHH--------HHHHHHHHHHHTT
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHH--------HHHHHhhhhhhCC
Confidence 57999999999999999999999999999999999999999999999999999999888 9999999999999
Q ss_pred CcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 292 PDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 292 v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
+|+|++++||+++|++||.++||++++++++.+++|||++|||.+++++++++++.+|+ |+.|+++++|+
T Consensus 73 ~nVVl~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~-~~~v~e~~ig~ 142 (159)
T 1ass_A 73 ANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGE-AETVEERKIGD 142 (159)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEE-EEEEEEEEETT
T ss_pred CeEEEECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCcc-ceEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999985
No 29
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.37 E-value=1.3e-15 Score=152.14 Aligned_cols=194 Identities=18% Similarity=0.196 Sum_probs=145.4
Q ss_pred hhcccccchHHHHHHHHHHHHhh-hccccCCccccccccceeEEEcCCCCcccceeEe-------ceeeccccCCccCcc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQT-VTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLR-------GVMLNKDVTHPKMRR 184 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~-i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~-------Giv~~~~~~~~~m~~ 184 (362)
+||..|.++|+.+.+.+++.++. ++.+.+.. | ...+.+++.++++ |+++. .++.++ + .
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~---~---~e~l~~va~tsl~-sK~~~~~~~~i~~livdA------v-~ 171 (529)
T 3iyg_A 106 IHPTSVISGYRLACKEAVRYISENLIINTDEL---G---RDCLINAAKTSMS-SKVIGINGDFFANLVVDA------V-L 171 (529)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCC---C---HHHHHHHHHHHhc-cCcccccHHHHHHHHHHH------H-H
Confidence 68889999999999999999987 65543211 1 1224455566655 44433 222222 0 1
Q ss_pred ccc------CceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCH
Q psy2832 185 RIE------NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNE 258 (362)
Q Consensus 185 ~~~------~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~ 258 (362)
.+. +..+++.++.+++.+|+++.||++++|++|++.+.||+||++++||||++++| +++++++
T Consensus 172 ~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~-----------~le~~k~ 240 (529)
T 3iyg_A 172 AIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDF-----------SLQKTKM 240 (529)
T ss_pred HHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecC-----------Ccccccc
Confidence 111 12456667889999999999999999999999999999999999999999999 8988887
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEcc
Q psy2832 259 AEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVN 338 (362)
Q Consensus 259 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~ 338 (362)
+...++... ++++++ .+.+.|++.+...++.|+. .|++. ++++++|. +..+++|++. |+.+++
T Consensus 241 e~~~~v~i~---~~~~~~--~i~~~E~~~l~~~v~kI~~-~g~nv----vi~~~~I~------d~al~~L~~~-gI~av~ 303 (529)
T 3iyg_A 241 KLGVQVVIT---DPEKLD--QIRQRESDITKERIQKILA-TGANV----ILTTGGID------DMCLKYFVEA-GAMAVR 303 (529)
T ss_pred cCCceEEeC---CHHHHH--HHHHHHHHHHHHHHHHHHh-cCCCE----EEECCCCC------HHHHHHHHHc-CCceec
Confidence 665554322 667777 9999999999999999884 67764 37788875 4599999999 999999
Q ss_pred CCCCCCCCCC
Q psy2832 339 RTEELREEDV 348 (362)
Q Consensus 339 ~~~~~~~~~l 348 (362)
+++..+.+.+
T Consensus 304 ~v~k~~leri 313 (529)
T 3iyg_A 304 RVLKRDLKRI 313 (529)
T ss_pred cCCHHHHHHH
Confidence 9887665543
No 30
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.35 E-value=1.9e-15 Score=150.39 Aligned_cols=193 Identities=18% Similarity=0.226 Sum_probs=142.3
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEec-------eeeccccCCccCccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRG-------VMLNKDVTHPKMRRR 185 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~G-------iv~~~~~~~~~m~~~ 185 (362)
+||..|.++|+.+.+.+++.++.++.+.+..+ ...+.+++.++++ |+++.. ++.+.- ..
T Consensus 105 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~------~~~l~~va~tsl~-sK~i~~~~~~~~~i~vdav-------~~ 170 (515)
T 3iyg_G 105 MHPTVVISAYRKALDDMISTLKKISIPVDTSN------RDTMLNIINSSIT-TKVISRWSSLACNIALDAV-------KT 170 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC------HHHHHHHHHHHhc-CCchhhHHHHHHHHHHHHH-------Hh
Confidence 68989999999999999999998865543211 1123445555554 454432 111110 01
Q ss_pred cc-----CceEEEee-cccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHH
Q psy2832 186 IE-----NPRIVLLD-CTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEA 259 (362)
Q Consensus 186 ~~-----~~~i~l~~-~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~ 259 (362)
+. ...+++.+ +.+.+.+|+++.||++++|++|++.+.||+||++++||||++++| ++++++++
T Consensus 171 V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~-----------~Le~~k~e 239 (515)
T 3iyg_G 171 VQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDS-----------SLEYKKGE 239 (515)
T ss_pred cccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEcc-----------cccccccc
Confidence 11 11234433 678899999999999999999999999999999999999999999 99998877
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccC
Q psy2832 260 EFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNR 339 (362)
Q Consensus 260 ~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~ 339 (362)
...++... +++++. .+.+.|+++++..++.|.. .|++. ++++++|.. ..+++|++. |+.++++
T Consensus 240 ~~~~v~is---~~~~l~--~~l~~E~~~l~~~v~kI~~-~g~~v----Ii~~~~I~~------~al~~L~~~-~I~av~~ 302 (515)
T 3iyg_G 240 SQTDIEIT---REEDFT--RILQMEEEYIQQLCEDIIQ-LKPDV----VITEKGISD------LAQHYLMRA-NITAIRR 302 (515)
T ss_pred cCceEEeC---CHHHHH--HHHHHHHHHHHHHHHHHHh-CCCCE----EEECCccCH------HHHHHHHHC-Cceeecc
Confidence 65544322 677777 9999999999999999885 57664 477777754 599999998 9999998
Q ss_pred CCCCCCCC
Q psy2832 340 TEELREED 347 (362)
Q Consensus 340 ~~~~~~~~ 347 (362)
++..+.+.
T Consensus 303 ~~k~~ler 310 (515)
T 3iyg_G 303 VRKTDNNR 310 (515)
T ss_pred CCHHHHHH
Confidence 88765544
No 31
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.26 E-value=1.7e-14 Score=143.59 Aligned_cols=200 Identities=16% Similarity=0.156 Sum_probs=140.9
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCCccC---ccccc--
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHPKM---RRRIE-- 187 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~~~m---~~~~~-- 187 (362)
+||..|.++|+.+.+.+++.++.++.+.+. |. ..+.+++.++++ |++.. ...+++.+-. +..+.
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~----~~---~~L~~va~tsl~-sKi~~---~~~d~la~l~vdaV~~V~~~ 174 (517)
T 3iyg_Z 106 LHPRIITEGFEAAKEKALQFLEQVKVSKEM----DR---ETLIDVARTSLR-TKVHA---ELADVLTEAVVDSILAIKKQ 174 (517)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCcCCCC----CH---HHHHHHHHHHhc-cccch---hHHHHHHHHHHHHhheeccC
Confidence 689999999999999999999988754321 11 123444555554 33322 1111111000 01111
Q ss_pred CceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHHHH
Q psy2832 188 NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQL 267 (362)
Q Consensus 188 ~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~ 267 (362)
+..+++.++.+.+.+|++..||++++|++|++.+.||.||++++||+|+++|+ ++++++++...++...
T Consensus 175 ~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~-----------~le~~k~e~~~~~~i~ 243 (517)
T 3iyg_Z 175 DEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNV-----------SLEYEKTEVNSGFFYK 243 (517)
T ss_pred CCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEecc-----------cccccccccceeEEeC
Confidence 12366677899999999999999999999999999999999999999999999 8988887765555422
Q ss_pred HHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHH-----HHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCC
Q psy2832 268 EEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDL-----AQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEE 342 (362)
Q Consensus 268 e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~-----~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~ 342 (362)
++++++ .+.+.+++++...++.|+. .|.+.. .+.++++++ +++..+++|++. |+.+++++++
T Consensus 244 ---~~~~l~--~~~~~E~~~i~~~v~~I~~-~~~~v~~~~~~~lvIi~~~~------I~d~al~~L~~~-gI~~v~~v~~ 310 (517)
T 3iyg_Z 244 ---SAEERE--KLVKAERKFIEDRVKKIIE-LKKKVCGDSDKGFVVINQKG------IDPFSLDALAKE-GIIALRRAKR 310 (517)
T ss_pred ---CHHHHH--HHHHHHHHHHHHHHHHHHH-hhhhhhhccCCceEEEeccc------CCHHHHHHHHHC-CCEEEEecCH
Confidence 678888 9999999999998888874 343310 001233444 466799999999 9999999876
Q ss_pred CCCCC
Q psy2832 343 LREED 347 (362)
Q Consensus 343 ~~~~~ 347 (362)
.+.+.
T Consensus 311 ~~ler 315 (517)
T 3iyg_Z 311 RNMER 315 (517)
T ss_pred HHHHH
Confidence 55443
No 32
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.23 E-value=2.9e-14 Score=141.39 Aligned_cols=193 Identities=20% Similarity=0.260 Sum_probs=122.7
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCccccee-------EeceeeccccCCccCccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCV-------LRGVMLNKDVTHPKMRRR 185 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~l-------v~Giv~~~~~~~~~m~~~ 185 (362)
+||..|.++|+.+.+.+++.++.++.+.+.. |. ..+.+++.++++ |++ +..++.++-.. +..
T Consensus 69 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---d~---~~l~~va~tsl~-sKi~~~~~~~i~~li~dAv~~----v~~ 137 (500)
T 3aq1_B 69 VHSTIISEGYRHAAEKCREILETITIAISPD---DE---AALIKIAGTAIT-GKGAEAYKEKLSALTVKAVRS----IVE 137 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTT---CH---HHHHHHHHTTCC-SSSTTSSHHHHHHHHHHHHTT----SEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---cH---HHHHHHHHHHhh-cccccccHHHHHHHHHHHHHH----hcc
Confidence 5888899999999999999999987654321 11 124455566655 333 32333332100 000
Q ss_pred ccCc--eEE-EeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHH
Q psy2832 186 IENP--RIV-LLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFT 262 (362)
Q Consensus 186 ~~~~--~i~-l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~ 262 (362)
..+. .++ +.++.+++.+|++++||++++|++|++.+.||.||++++||||+++|| ++++++++...
T Consensus 138 ~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~-----------~Le~~k~e~~~ 206 (500)
T 3aq1_B 138 EEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSC-----------PVEFRKTEVDS 206 (500)
T ss_dssp CCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESS-----------CBCC-------
T ss_pred cccCCccccccccEEEEEecCCCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeC-----------Cccccccccce
Confidence 0011 233 445788899999999999999999999999999999999999999999 88888888766
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCC
Q psy2832 263 KILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEE 342 (362)
Q Consensus 263 ~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~ 342 (362)
++... ++++++ .+.+.|++++...++.|. +.|++.+ +++++| +...+++|++. |+.++++++.
T Consensus 207 ~v~i~---~~~~l~--~~~~~E~~~l~~~le~I~-~~g~~lv----i~~~~I------~~~al~~L~~~-~I~av~~~~k 269 (500)
T 3aq1_B 207 EIKIT---SPGQMQ--LFLDQEEKMMREMAEKVI-ASGANVV----FCQKGI------DDMAQYYIEKA-GIYAVRRVKK 269 (500)
T ss_dssp -----------------------CHHHHHHHHHH-TTCCSEE----EESSCB------CHHHHHHHHHT-TCEEECSCCH
T ss_pred eEeeC---CHHHHH--HHHHHHHHHHHHHHHHHH-HhCcCEE----EECCCc------CHHHHHHHHHC-CEEEEEeCCH
Confidence 66433 778888 999999998888888886 4677743 667777 46699999999 9999988765
Q ss_pred CC
Q psy2832 343 LR 344 (362)
Q Consensus 343 ~~ 344 (362)
.+
T Consensus 270 ~~ 271 (500)
T 3aq1_B 270 SD 271 (500)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 33
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.23 E-value=5.1e-14 Score=140.09 Aligned_cols=199 Identities=16% Similarity=0.113 Sum_probs=141.6
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCCccCc---ccccCc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHPKMR---RRIENP 189 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~~~m~---~~~~~~ 189 (362)
+||..+.++|+.+.+.+++.++.++.+.+.....| ...+.+++.++++ |+++.+ +.+.+.+-.+ ..+. +
T Consensus 108 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~---~~~l~~va~tsls-sK~~~~---~~~~i~~livdAv~~V~-~ 179 (513)
T 3iyg_B 108 IHPQTIIAGWREATKAARQALLNSAVDHGSDEVKF---RQDLMNIAGTTLS-SKLLTH---HKDHFTKLAVEAVLRLK-G 179 (513)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccC---HHHHHHHHHhhhc-cccccc---chHHHHHHHHHHHHHhc-c
Confidence 68989999999999999999998876543100001 1234556666666 554431 1111111001 1121 1
Q ss_pred eEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHH-HHHHHHHHH
Q psy2832 190 RIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEA-EFTKILQLE 268 (362)
Q Consensus 190 ~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~-~~~~~~~~e 268 (362)
.+++..+.+++.+|+++.||++++|++|++.+.|| ||++++||||+++|| ++++++++ ...++...
T Consensus 180 ~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~~en~kIll~~~-----------~Le~~k~e~~~~~v~is- 246 (513)
T 3iyg_B 180 SGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QPKRIENAKILIANT-----------GMDTDKIKIFGSRVRVD- 246 (513)
T ss_pred cCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-CceeecCceEEEEcC-----------CcccccccccCCceEEc-
Confidence 24556678899999999999999999999999999 999999999999999 89888776 33332211
Q ss_pred HHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCC
Q psy2832 269 EEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDV 348 (362)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~l 348 (362)
+++++. .+.+.+++.+...++.|.. .|++.+ +++++|. +..+++|++. |+.++++++..+.+.+
T Consensus 247 --s~~~l~--~~~~~E~~~l~~~le~I~~-~g~~vv----i~~~~I~------~~al~~L~~~-~I~av~~~~~~~le~i 310 (513)
T 3iyg_B 247 --STAKVA--EIEHAEKEKMKEKVERILK-HGINCF----INRQLIY------NYPEQLFGAA-GVMAIEHADFVGVERL 310 (513)
T ss_pred --CHHHHH--HHHHHHHHHHHHHHHHHHh-cCCCEE----EEcCCcc------HHHHHHHHHc-CceEEecCCHHHHHHH
Confidence 566666 8889999999999998874 577643 7777775 4599999999 9999999887554443
No 34
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.19 E-value=9.8e-14 Score=138.03 Aligned_cols=201 Identities=14% Similarity=0.144 Sum_probs=131.4
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCCccCc---ccccCc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHPKMR---RRIENP 189 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~~~m~---~~~~~~ 189 (362)
+||..+.++|+.+.+.+++.++.++.+.+..+.-++ ...+.+++.++++ |+++.+. .+.+.+-.+ ..+. .
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~--~~~L~~va~tsl~-sK~~s~~---~~~i~~livdAv~~V~-~ 179 (515)
T 3iyg_H 107 LHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQ--RKLLEKCAMTALS-SKLISQQ---KAFFAKMVVDAVMMLD-D 179 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHH--HHHHHHHHHHHhc-CCccccc---HHHHHHHHHHHHHHhc-c
Confidence 689999999999999999999988765421110000 0123455566665 5555421 111111011 1121 2
Q ss_pred eEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccc---cceeEEEcCHHHHHHHHH
Q psy2832 190 RIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGE---SQTNVEIVNEAEFTKILQ 266 (362)
Q Consensus 190 ~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~---~~~~l~~~~~~~~~~~~~ 266 (362)
.+++..+.+++.+|+++.||++++|++|++.+.||.|. .+|+. .+.++ .+.++++++++...++..
T Consensus 180 ~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~---~~p~~--------~en~kIll~~~~Le~~k~e~~~~v~i 248 (515)
T 3iyg_H 180 LLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFE---MQPKK--------YHNPMIALLNVELELKAEKDNAEIRV 248 (515)
T ss_pred cCCcceEEEEecCCCCccceEEEeeeEEecCccCcccc---cCCcc--------ccccEEEEEcccccccccccCceEEe
Confidence 34555678899999999999999999999999999863 34441 11111 134566666555444322
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCC
Q psy2832 267 LEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREE 346 (362)
Q Consensus 267 ~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~ 346 (362)
. ++++++ .+.+.+++++...++.|. +.|++.+ +++++|.. ..+++|++. |+.++.+++..+.+
T Consensus 249 s---~~~~l~--~~~~~E~~~l~~~le~I~-~~g~~vv----i~~~~I~d------la~~~l~~~-gI~~v~~~~k~~le 311 (515)
T 3iyg_H 249 H---TVEDYQ--AIVDAEWNILYDKLEKIH-HSGAKVV----LSKLPIGD------VATQYFADR-DMFCAGRVPEEDLK 311 (515)
T ss_pred C---CHHHHH--HHHHHHHHHHHHHHHHHH-hcCCcEE----EECCcccH------HHHHHHHHc-CCcccccccHHHHH
Confidence 2 667777 899999999999999887 4577653 78888864 489999988 99999988776555
Q ss_pred CC
Q psy2832 347 DV 348 (362)
Q Consensus 347 ~l 348 (362)
.+
T Consensus 312 ri 313 (515)
T 3iyg_H 312 RT 313 (515)
T ss_pred HH
Confidence 43
No 35
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.19 E-value=1.1e-13 Score=137.75 Aligned_cols=199 Identities=14% Similarity=0.110 Sum_probs=141.0
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCCccC---ccccc--
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHPKM---RRRIE-- 187 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~~~m---~~~~~-- 187 (362)
+||..+.++|+.+.+.+++.++.++.+.... .-| ...+.+++.++++ |+++.. ..+++.+-. +..+.
T Consensus 106 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~-~~~---~~~l~~vA~tsl~-sK~i~~---~~~~l~~l~~dav~~V~~~ 177 (515)
T 3iyg_E 106 IHPIRIADGYEQAARIAIEHLDKISDSVLVD-MKN---TEPLIQTAKTTLG-SKVVNS---CHRQMAEIAVNAVLTVADM 177 (515)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhceecCCC-ccC---HHHHHHHHHHHhc-ccchhH---HHHHHHHHHHHHHHhhccc
Confidence 6888999999999999999999887544221 001 1124455555555 444321 111111000 01111
Q ss_pred -CceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHHH
Q psy2832 188 -NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQ 266 (362)
Q Consensus 188 -~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~ 266 (362)
...+.+..+.+++.+|+++.||++++|++|++.+.||.||+++++|||++++| ++++.+++....+..
T Consensus 178 ~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~-----------~le~~k~~~~~~~~i 246 (515)
T 3iyg_E 178 QRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTC-----------PFEPPKPKTKHKLDV 246 (515)
T ss_pred ccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcC-----------ccccccccccceeee
Confidence 11355667889999999999999999999999999999999999999999999 888776554333322
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCC
Q psy2832 267 LEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREE 346 (362)
Q Consensus 267 ~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~ 346 (362)
+++++++ .+.+.+++.+...++.|.. .|.+. ++++++|. ...+++|++. |++++.++...+.+
T Consensus 247 ---s~~~~l~--~~~~~E~~~l~~~lekI~~-~g~~v----vi~~~~I~------~~al~~L~~~-~I~~v~~v~k~~le 309 (515)
T 3iyg_E 247 ---TSVEDFK--ALQKYEKEKFEEMIRQIKE-TGANL----AVCQWGFD------DEANHLLLQN-DLPAVRWVGGPEIE 309 (515)
T ss_pred ---CCHHHHH--HHHHHHHHHHHHHHHHHHh-cCCCE----EEEeCCCC------HHHHHHHHHC-CCEEEeccCHHHHH
Confidence 2667777 8999999999888888874 56664 36677764 5699999999 99999998765544
Q ss_pred C
Q psy2832 347 D 347 (362)
Q Consensus 347 ~ 347 (362)
.
T Consensus 310 ~ 310 (515)
T 3iyg_E 310 L 310 (515)
T ss_pred H
Confidence 4
No 36
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.18 E-value=1.4e-13 Score=137.13 Aligned_cols=198 Identities=14% Similarity=0.117 Sum_probs=143.3
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEe-------ceeeccccCCccCccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLR-------GVMLNKDVTHPKMRRR 185 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~-------Giv~~~~~~~~~m~~~ 185 (362)
+||..+.++|+.+.+.+++.++.++.+.+.. | ...+.+++.++++ |+++. .++.++ | ..
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---~---~~~l~~vA~tsl~-sK~~~~~~~~i~~livdA------v-~~ 172 (518)
T 3iyg_D 107 IHPTIISESFQKALEKGIEILTDMSRPVELS---D---RETLLNSAATSLN-SKVVSQYSSLLSPMSVDA------V-MK 172 (518)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHheeeCCCC---C---hHHHHHHhHhhhc-cccchhhHHHHHHHHHHH------H-HH
Confidence 6899999999999999999999887654311 1 1235566666666 55443 222221 0 11
Q ss_pred cc----CceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHH
Q psy2832 186 IE----NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEF 261 (362)
Q Consensus 186 ~~----~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~ 261 (362)
+. +..+.+.++.+++.+|+++.||++++|++|++.+.| +||++++||||++++| ++++++++..
T Consensus 173 V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~-----------~Le~~k~~~~ 240 (518)
T 3iyg_D 173 VIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQF-----------CLSAPKTDMD 240 (518)
T ss_pred hhccccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc-CCCccccCceEEEEEe-----------eccccccccC
Confidence 11 334677778999999999999999999999999999 9999999999999999 8887766533
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCC
Q psy2832 262 TKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTE 341 (362)
Q Consensus 262 ~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~ 341 (362)
.++.. +++++++ .+.+.+++.+...++.|.. .|++.+ ++++.|. -+.++...+++|++. |+.++++++
T Consensus 241 ~~i~i---s~~~~~~--~~~~~E~~~l~~~le~I~~-~g~~lv----i~~k~i~-~~~I~~~Al~~L~~~-~I~av~~~~ 308 (518)
T 3iyg_D 241 NQIVV---SDYVQMD--RVLREERAYILNLVKQIKK-TGCNVL----LIQKSIL-RDALSDLALHFLNKM-KIMVVKDIE 308 (518)
T ss_pred ceEEe---cCHHHHH--HHHHHHHHHHHHHHHHHHh-cCCCEE----EEecccc-ccCcCHHHHHHHHHc-CcEEEecCC
Confidence 32221 1566777 8999999999888888874 576643 5533321 145567799999999 999999988
Q ss_pred CCCCCCC
Q psy2832 342 ELREEDV 348 (362)
Q Consensus 342 ~~~~~~l 348 (362)
..+.+.+
T Consensus 309 ~~~le~i 315 (518)
T 3iyg_D 309 REDIEFI 315 (518)
T ss_pred HHHHHHH
Confidence 7655443
No 37
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.18 E-value=1.3e-14 Score=145.23 Aligned_cols=202 Identities=20% Similarity=0.241 Sum_probs=143.9
Q ss_pred HHHHHHHHH----hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeE-------ecee
Q psy2832 104 KLIEVIKAC----VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVL-------RGVM 172 (362)
Q Consensus 104 ~ll~ia~t~----l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv-------~Giv 172 (362)
+|++-+... +||..|.++|+.+.+.+++.++.++.+.+.. | ...+.+++.++++ |+++ ..++
T Consensus 113 eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---d---~e~L~~vA~tsl~-sK~~~~~~~~i~~li 185 (553)
T 3ko1_A 113 ELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSIN---D---TDLLRKIAMTSLS-SKAVAGAREYIADIV 185 (553)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTT---C---HHHHHHHHHHHHT-TSSCCTTHHHHHHHH
T ss_pred HHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCC---c---HHHHHHHHHHHhh-HHhhhhHHHHHHHHH
Confidence 444444443 6888999999999999999999887654311 1 1123344444444 3332 2233
Q ss_pred eccccCCccCccccc---Cc--eEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeeccccccccc
Q psy2832 173 LNKDVTHPKMRRRIE---NP--RIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKG 247 (362)
Q Consensus 173 ~~~~~~~~~m~~~~~---~~--~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~ 247 (362)
.++- ..+. +. .+++.++.+++.+|+++.||++++|++|++.+.||.||++++||||+++||
T Consensus 186 vdAv-------~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~------- 251 (553)
T 3ko1_A 186 VKAV-------TQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDA------- 251 (553)
T ss_dssp HHHH-------HHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEECS-------
T ss_pred HHHH-------HHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEEecC-------
Confidence 3220 1111 11 256667888999999999999999999999999999999999999999999
Q ss_pred ccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHH
Q psy2832 248 ESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNR 327 (362)
Q Consensus 248 ~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~ 327 (362)
++++++++...++... ++++++ .+.+.+++.+...++.|+ +.|++.+ +++++|. ...+++
T Consensus 252 ----~Le~~k~e~~~~v~Is---s~~~l~--~~~~~E~~~l~~~vekI~-~~g~~vv----I~~~~I~------~~al~~ 311 (553)
T 3ko1_A 252 ----SLEVEKPELDAEIRIN---DPTQMQ--KFLDEEENLIKEKVDKIL-ATGANVI----ICQKGID------EVAQSY 311 (553)
T ss_dssp ----CBSCCCCTTTCCCCCC---SHHHHH--HHHHHHHHHHHHHHHHHH-TTCCSEE----ECSSCBC------SHHHHH
T ss_pred ----cccccCcccCceEEeC---CHHHHH--HHHHHHHHHHHHHHHHHH-hhcceEE----EeccChH------HHHHHH
Confidence 8888776644333211 556666 899999999988888887 5677743 7777775 459999
Q ss_pred HHHHhCCeEccCCCCCCCCC
Q psy2832 328 IARACGATIVNRTEELREED 347 (362)
Q Consensus 328 la~~tG~~iv~~~~~~~~~~ 347 (362)
|++. |+.++++++..+.+.
T Consensus 312 L~~~-gI~~v~~v~k~~ler 330 (553)
T 3ko1_A 312 LAKK-GVLAVRRAKKSDLEK 330 (553)
T ss_dssp HHHH-TCEEECCCCHHHHHH
T ss_pred HHhc-chhhhhhhhhhhHHH
Confidence 9998 999999887654443
No 38
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.11 E-value=1.8e-13 Score=137.65 Aligned_cols=206 Identities=19% Similarity=0.261 Sum_probs=141.2
Q ss_pred HHHHHHHHH-----hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccce-------eEece
Q psy2832 104 KLIEVIKAC-----VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSC-------VLRGV 171 (362)
Q Consensus 104 ~ll~ia~t~-----l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~-------lv~Gi 171 (362)
+|++-+... +||..|.++|+.+++.+++.++.++.+.+.. | ...+.+++.++++ |+ .+..+
T Consensus 102 eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---~---~e~L~~vA~tsls-SK~~~~~~~~i~~l 174 (590)
T 3p9d_C 102 EILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVE---N---DAAMKKLIQASIG-TKYVIHWSEKMCEL 174 (590)
T ss_dssp HHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTC---C---THHHHHHHTTTST-TSTTGGGHHHHHHH
T ss_pred HHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccC---C---HHHHHHHHHHHHh-cccccccHHHHHHH
Confidence 455555544 5888899999999999999999887554321 1 1234556666665 43 33333
Q ss_pred eeccccCC-ccCcccccCc---eEEEe-ecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccc
Q psy2832 172 MLNKDVTH-PKMRRRIENP---RIVLL-DCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKK 246 (362)
Q Consensus 172 v~~~~~~~-~~m~~~~~~~---~i~l~-~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k 246 (362)
+.++-... +......++. .+++. ++.+++.+|+++.||++++|++|++.+.||+||++++||||+++||
T Consensus 175 ivdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~kIll~d~------ 248 (590)
T 3p9d_C 175 ALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDC------ 248 (590)
T ss_dssp HHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESCCEECCCC------
T ss_pred HHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeeeeEEEEEcc------
Confidence 33321000 0000000000 12222 4788999999999999999999999999999999999999999999
Q ss_pred cccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHH
Q psy2832 247 GESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNN 326 (362)
Q Consensus 247 ~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~ 326 (362)
++++++++....+.. +++++++ .+.+.+++.++..++.|.. .|++. ++++.+|. +..++
T Consensus 249 -----~Le~~K~e~~~~v~I---s~~~~l~--~il~~E~~~l~~~vekI~~-~g~~v----II~e~~I~------d~Al~ 307 (590)
T 3p9d_C 249 -----PLEYKKGESQTNIEI---EKEEDWN--RILQIEEEQVQLMCEQILA-VRPTL----VITEKGVS------DLAQH 307 (590)
T ss_dssp -----CCSCCCCTTTEECCB---CSTTHHH--HHHHHHHHHHHHHHHHHHT-TCCSE----ECCSSCCC------THHHH
T ss_pred -----cccccccccCceEEe---CCHHHHH--HHHHHHHHHHHHHHHHHHh-cCCcE----EEecCCcC------HHHHH
Confidence 888877654333321 1566666 8999999999999988875 46653 36777775 55999
Q ss_pred HHHHHhCCeEccCCCCCC
Q psy2832 327 RIARACGATIVNRTEELR 344 (362)
Q Consensus 327 ~la~~tG~~iv~~~~~~~ 344 (362)
+|++. |+.+++++...+
T Consensus 308 ~L~k~-~I~av~~~~k~~ 324 (590)
T 3p9d_C 308 YLLKG-GCSVLRRVKKSD 324 (590)
T ss_dssp HHHHT-TCCCCCCCCHHH
T ss_pred HHHhc-cceeeccCCHHH
Confidence 99999 999988776543
No 39
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.08 E-value=9.8e-14 Score=138.45 Aligned_cols=198 Identities=13% Similarity=0.108 Sum_probs=137.3
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeE-------eceeeccccCCccCccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVL-------RGVMLNKDVTHPKMRRR 185 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv-------~Giv~~~~~~~~~m~~~ 185 (362)
+||..+.++|+.+.+.+++.++.++.+.+.. | ...+.+++.++++ |+++ ..++.++-.. +..
T Consensus 115 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---~---~e~l~~va~tsl~-sK~~~~~~~~i~~livdAv~~----V~~ 183 (528)
T 3p9d_D 115 IHPTIIADSFQSAAKRSVDILLEMCHKVSLS---D---REQLVRAASTSLS-SKIVSQYSSFLAPLAVDSVLK----ISD 183 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCCCSC---C---HHHHHHHHHHHSC-SSSCSTTHHHHHHHHHHHHHT----TCC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhCCCCCC---C---HHHHHHHHHHHhc-CCccchhHHHHHHHHHHHHHH----hcc
Confidence 6888899999999999999999887654311 1 1123344444444 3333 2333332100 000
Q ss_pred ccCceEEEeecccccccCCCccceeeecccccccccccch-hhccccCcceeeecccccccccccceeEEEcCHHHHHHH
Q psy2832 186 IENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPK-MRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKI 264 (362)
Q Consensus 186 ~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~-~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~ 264 (362)
..+..+.+.++.+.+.+|+++.||++++|++|++.+.||. ||++++||||++++| ++++++++...++
T Consensus 184 ~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~-----------~le~~k~~~~~~i 252 (528)
T 3p9d_D 184 ENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQF-----------QISPPKPDTENNI 252 (528)
T ss_dssp TTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECC-----------CSSCCCCSSEEEE
T ss_pred ccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEec-----------cccccccccCceE
Confidence 0124566678899999999999999999999999999998 999999999999999 7766654432222
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCC
Q psy2832 265 LQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELR 344 (362)
Q Consensus 265 ~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~ 344 (362)
... ++++++ .+.+.+++.+...++.|.. .|++.+ +++++|.. +.++...+++|++. |+.++++++..+
T Consensus 253 ~i~---~~~~~~--~~~~~E~~~l~~~le~I~~-~g~~vv----i~~~~I~~-~a~~~~al~~L~~~-~I~av~~~~k~~ 320 (528)
T 3p9d_D 253 IVN---DYRQMD--KILKEERAYLLNICKKIKK-AKCNVL----LIQKSILR-DAVNDLALHFLSKL-NIMVVKDIEREE 320 (528)
T ss_dssp EES---SSSHHH--HHTHHHHHHHHHHHHHHHH-TTCCEE----EESSCSCT-TSCSCHHHHHHTTT-SCCEEECCCTHH
T ss_pred EeC---CHHHHH--HHHHHHHHHHHHHHHHHHh-cCCCEE----EEeCCccc-ccCCHHHHHHHHHc-CcEEEEeCCHHH
Confidence 111 455666 8888899988888888874 566643 67777710 11245699999998 999999887644
No 40
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.07 E-value=5.8e-14 Score=140.61 Aligned_cols=192 Identities=16% Similarity=0.177 Sum_probs=138.1
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCccccee-------EeceeeccccCCccCccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCV-------LRGVMLNKDVTHPKMRRR 185 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~l-------v~Giv~~~~~~~~~m~~~ 185 (362)
+||..|.++|+.+.+.+++.++.++.+.+.. |. ..+.+++.++++ |++ +..++.++- ..
T Consensus 117 ihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~---~~---~~l~~va~tsl~-sKi~~~~~~~i~~livdAv-------~~ 182 (543)
T 1a6d_B 117 VHPTVISEGYRMASEEAKRVIDEISTKIGAD---EK---ALLLKMAQTSLN-SKSASVAKDKLAEISYEAV-------KS 182 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTT---HH---HHHHHHHHHHHT-TSGGGGGHHHHHHHHHHHH-------HH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CH---HHHHHHHHHHhc-cccccccHHHHHHHHHHHH-------HH
Confidence 6888999999999999999999987654321 11 123444454443 332 222333320 11
Q ss_pred cc----C-ceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHH
Q psy2832 186 IE----N-PRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAE 260 (362)
Q Consensus 186 ~~----~-~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~ 260 (362)
+. . ..+++.++.+++.+|++++||++++|++|++.+.||.||++++||||+++|| ++++++++.
T Consensus 183 v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~-----------~Le~~k~e~ 251 (543)
T 1a6d_B 183 VAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDA-----------PLEIKKPEF 251 (543)
T ss_dssp HEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESS-----------CBSCCCCSS
T ss_pred hcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEec-----------ccccccccC
Confidence 11 1 1355556788899999999999999999999999999999999999999999 887776554
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCC
Q psy2832 261 FTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRT 340 (362)
Q Consensus 261 ~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~ 340 (362)
..++... ++++++ .+.+.|++++...++.|+ +.|++.+ +++++| +...+++|++. |+.+++++
T Consensus 252 ~~~v~i~---~~~~l~--~~~~~E~~~l~~~le~I~-~~g~~lv----i~~~~I------~~~al~~L~~~-~I~av~~v 314 (543)
T 1a6d_B 252 DTNLRIE---DPSMIQ--KFLAQEENMLREMVDKIK-SVGANVV----ITQKGI------DDMAQHYLSRA-GIYAVRRV 314 (543)
T ss_dssp EEEECCC---STTHHH--HHHHHHHHHHHHHHHHHH-HTTCCEE----EESSCB------CHHHHHHHHHT-TCEEECSC
T ss_pred CceEEeC---CHHHHH--HHHHHHHHHHHHHHHHHH-HcCCCEE----EECCCc------CHHHHHHHHHC-CeeEeccC
Confidence 3333211 566676 899999999988888887 4567643 667776 46699999999 99999888
Q ss_pred CCCCCC
Q psy2832 341 EELREE 346 (362)
Q Consensus 341 ~~~~~~ 346 (362)
+..+.+
T Consensus 315 ~k~~le 320 (543)
T 1a6d_B 315 KKSDMD 320 (543)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 764433
No 41
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.07 E-value=4.7e-14 Score=141.38 Aligned_cols=191 Identities=20% Similarity=0.258 Sum_probs=135.8
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcc------cceeEeceeeccccCCccCcccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIE------DSCVLRGVMLNKDVTHPKMRRRI 186 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~------dS~lv~Giv~~~~~~~~~m~~~~ 186 (362)
+||..|.++|+.+.+.+++.++.++.+.+.. |. ..+.+++.++++ ++..+..++.++- ..+
T Consensus 119 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---d~---~~l~~va~tsl~sKi~~~~~~~i~~livdAv-------~~V 185 (548)
T 1q3q_A 119 IHPSIITKGYALAAEKAQEILDEIAIRVDPD---DE---ETLLKIAATSITGKNAESHKELLAKLAVEAV-------KQV 185 (548)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTT---CH---HHHHHHHHHHSCSSTTGGGHHHHHHHHHHHH-------HHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CH---HHHHHHHHHHhhccccccchHHHHHHHHHHH-------HHh
Confidence 6888899999999999999999987654321 11 123344444443 1223333333320 111
Q ss_pred c-----CceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHH
Q psy2832 187 E-----NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEF 261 (362)
Q Consensus 187 ~-----~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~ 261 (362)
. ...+++..+.+++.+|++++||++++|++|++.+.||.||++++||||+++|| ++++++++..
T Consensus 186 ~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~-----------~Le~~k~e~~ 254 (548)
T 1q3q_A 186 AEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINE-----------ALEVKKTETD 254 (548)
T ss_dssp CEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECS-----------CBSCCCCSSC
T ss_pred ccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEec-----------CcCcccccCC
Confidence 1 01344456788899999999999999999999999999999999999999999 8888776543
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCC
Q psy2832 262 TKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTE 341 (362)
Q Consensus 262 ~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~ 341 (362)
.++... ++++++ .+.+.|++++...++.|+. .|++.+ +++++| +...+++|++. |+.++++++
T Consensus 255 ~~v~i~---~~~~l~--~~~~~E~~~l~~~le~I~~-~g~~lv----i~~~~I------~~~al~~L~~~-~I~av~~~~ 317 (548)
T 1q3q_A 255 AKINIT---SPDQLM--SFLEQEEKMLKDMVDHIAQ-TGANVV----FVQKGI------DDLAQHYLAKY-GIMAVRRVK 317 (548)
T ss_dssp CCEEEC---SHHHHH--HHHHHHHHHHHHHHHHHHH-HTCCEE----EESSCB------CHHHHHHHHHT-TCEEECSCC
T ss_pred ceEEeC---CHHHHH--HHHHHHHHHHHHHHHHHHH-hCcCEE----EEcCCc------CHHHHHHHHHC-CcEEEccCC
Confidence 333211 455666 8999999998888888764 566643 666666 56699999999 999998876
Q ss_pred CCC
Q psy2832 342 ELR 344 (362)
Q Consensus 342 ~~~ 344 (362)
..+
T Consensus 318 k~~ 320 (548)
T 1q3q_A 318 KSD 320 (548)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 42
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.07 E-value=5.3e-14 Score=140.83 Aligned_cols=191 Identities=17% Similarity=0.190 Sum_probs=136.9
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeE-------eceeeccccCCccCccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVL-------RGVMLNKDVTHPKMRRR 185 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv-------~Giv~~~~~~~~~m~~~ 185 (362)
+||..|.++|+.+.+.+++.++.++.+.+.. | ...+.+++.++++ |+++ ..++.++ + ..
T Consensus 115 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---d---~~~L~~va~tsl~-sK~~~~~~~~i~~livdA------v-~~ 180 (543)
T 3ruv_A 115 VHPTIVVKGYQAAAQKAQELLKTIACEVGAQ---D---KEILTKIAMTSIT-GKGAEKAKEKLAEIIVEA------V-SA 180 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCEECCTT---C---HHHHHHHHHHHHH-HTCGGGCCHHHHHHHHHH------H-HH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhCCCCCC---C---HHHHHHHHHHHhc-ccccchhHHHHHHHHHHH------H-HH
Confidence 6888899999999999999999887654311 1 1123445555544 3332 2232222 0 11
Q ss_pred cc--CceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHH
Q psy2832 186 IE--NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTK 263 (362)
Q Consensus 186 ~~--~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~ 263 (362)
+. +..+++.++.+++.+|++++||++++|++|++.+.||.||++++||||+++|| ++++++++...+
T Consensus 181 V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~-----------~Le~~k~e~~~~ 249 (543)
T 3ruv_A 181 VVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNC-----------AIEIKETETDAE 249 (543)
T ss_dssp HCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESS-----------CBSCCCCSSCCC
T ss_pred hhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEcc-----------cccccccccCce
Confidence 11 13355556788999999999999999999999999999999999999999999 888876654332
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCC
Q psy2832 264 ILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEEL 343 (362)
Q Consensus 264 ~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~ 343 (362)
+.. +++++++ .+.+.+++.+...++.|+. .|++.+ +++++| +...+++|++. |+.++++++..
T Consensus 250 v~I---ss~~~l~--~~~~~E~~~l~~~ve~I~~-~g~~vv----i~~~~I------~~~al~~L~~~-gI~~v~~v~k~ 312 (543)
T 3ruv_A 250 IRI---TDPAKLM--EFIEQEEKMLKDMVAEIKA-SGANVL----FCQKGI------DDLAQHYLAKE-GIVAARRVKKS 312 (543)
T ss_dssp EEE---CSTTHHH--HHHHHHHHHHHHHHHHHHH-HTCSEE----EESSCB------CHHHHHHHHHT-TCEEECSCCHH
T ss_pred eEe---CCHHHHH--HHHHHHHHHHHHHHHHHHH-cCCCEE----EEeCCc------cHHHHHHHHHc-CcEEEeeCCHH
Confidence 221 1566666 8899999999888888874 566643 666666 45699999998 99999988654
Q ss_pred CC
Q psy2832 344 RE 345 (362)
Q Consensus 344 ~~ 345 (362)
+.
T Consensus 313 ~l 314 (543)
T 3ruv_A 313 DM 314 (543)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 43
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.07 E-value=1.6e-13 Score=137.68 Aligned_cols=190 Identities=17% Similarity=0.128 Sum_probs=138.3
Q ss_pred hhcccccchHHHHHHHHHHHHhh-hccccCCccccccccceeEEEcCCCCcccceeEe-------ceeeccccCCccCcc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQT-VTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLR-------GVMLNKDVTHPKMRR 184 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~-i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~-------Giv~~~~~~~~~m~~ 184 (362)
+||..|.++|+.+++.+++.++. ++.+.+.. |. ..+.+++.++++ |+++. .++.++- .
T Consensus 120 ihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~---~~---e~L~~vA~tsl~-sK~~~~~~~~i~~livdAv-------~ 185 (559)
T 3p9d_A 120 IHPTTIITGFRVALREAIRFINEVLSTSVDTL---GK---ETLINIAKTSMS-SKIIGADSDFFSNMVVDAL-------L 185 (559)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC-----C---TTHHHHHHHTTS-SSGGGTTHHHHHHHHHHHH-------H
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCC---CH---HHHHHHHHHHhc-cCcccchhHHHHHHHHHHH-------H
Confidence 68888999999999999999998 76554321 11 123445555554 44332 2333220 1
Q ss_pred ccc------CceEEEeecccccccCCCccceeeecccccccccccchhhcccc--CcceeeecccccccccccceeEEEc
Q psy2832 185 RIE------NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIE--NPRIVLLDCTLEYKKGESQTNVEIV 256 (362)
Q Consensus 185 ~~~------~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~--~~ki~~~~~~~~~~k~~~~~~l~~~ 256 (362)
.+. +..+.+.++.+++.+|+++.+|++++|++|++.+.||.||++++ ||||++++| +++++
T Consensus 186 ~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~-----------~Le~~ 254 (559)
T 3p9d_A 186 AVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDL-----------NLQKA 254 (559)
T ss_dssp HHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETT-----------CCSCC
T ss_pred HhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEec-----------ccccc
Confidence 111 23456667888999999999999999999999999999999999 999999999 77776
Q ss_pred CHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeE
Q psy2832 257 NEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATI 336 (362)
Q Consensus 257 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~i 336 (362)
+++...++... ++++++ .+.+.+++.+...++.|. +.|++.+ +++.+|. ...+++|++. |+.+
T Consensus 255 k~e~~~~v~is---~~~~l~--~i~~~E~~~l~~~le~I~-~~g~~lv----I~~~~I~------~~al~~L~~~-~I~a 317 (559)
T 3p9d_A 255 RMAMGVQINID---DPEQLE--QIRKREAGIVLERVKKII-DAGAQVV----LTTKGID------DLCLKEFVEA-KIMG 317 (559)
T ss_dssp CCCTTCCEEEC---SSSCHH--HHHHHHHHHHHHHHHHHH-TTCCSEE----EESSCCC------GGGTHHHHHT-TCEE
T ss_pred ccccCceEEeC---CHHHHH--HHHHHHHHHHHHHHHHHH-hhCCCEE----EEcCCCC------HHHHHHHHHc-CCce
Confidence 65543333211 566777 899999999988888887 4677643 6667664 5699999999 9999
Q ss_pred ccCCCCCC
Q psy2832 337 VNRTEELR 344 (362)
Q Consensus 337 v~~~~~~~ 344 (362)
+++++..+
T Consensus 318 v~~~~k~~ 325 (559)
T 3p9d_A 318 VRRCKKED 325 (559)
T ss_dssp ESSCCHHH
T ss_pred EccCCHHH
Confidence 98876543
No 44
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.04 E-value=1.1e-13 Score=138.66 Aligned_cols=190 Identities=17% Similarity=0.179 Sum_probs=136.6
Q ss_pred HhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeE-------eceeeccccCCccCcc
Q psy2832 112 CVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVL-------RGVMLNKDVTHPKMRR 184 (362)
Q Consensus 112 ~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv-------~Giv~~~~~~~~~m~~ 184 (362)
-+||..|.++|+.+.+.+++.++.++.+ + . |. ..+.+++.++++ |++. .-++.++- .
T Consensus 117 GihP~~I~~G~~~A~~~a~~~L~~~s~~-~-~---~~---~~l~~va~tsl~-sKi~~~~~~~i~~livdAv-------~ 180 (545)
T 1a6d_A 117 GVHPTVISNGYRLAVNEARKIIDEIAEK-S-T---DD---ATLRKIALTALS-GKNTGLSNDFLADLVVKAV-------N 180 (545)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHCEE-C-C---CH---HHHHHHHHHHTT-TSSCCSTHHHHHHHHHHHH-------H
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcCC-C-C---CH---HHHHHHHHHHHh-cccccccHHHHHHHHHHHH-------H
Confidence 3689999999999999999999988765 3 1 11 123344444443 3332 22333220 1
Q ss_pred ccc-C----ceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHH
Q psy2832 185 RIE-N----PRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEA 259 (362)
Q Consensus 185 ~~~-~----~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~ 259 (362)
.+. + ..+++..+.+++.+|++++||++++|++|++.+.||.||++++||||+++|| ++++++++
T Consensus 181 ~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~-----------~Le~~k~e 249 (545)
T 1a6d_A 181 AVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDS-----------ALEIKKTE 249 (545)
T ss_dssp HHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECS-----------CBSCCCCS
T ss_pred HHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEec-----------CCCccccc
Confidence 111 0 1344456788899999999999999999999999999999999999999999 88877765
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccC
Q psy2832 260 EFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNR 339 (362)
Q Consensus 260 ~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~ 339 (362)
...++... ++++++ .+.+.|++++...++.|+ +.|++.+ +++++| +...+++|++. |+.++++
T Consensus 250 ~~~~v~i~---~~~~l~--~~~~~E~~~l~~~le~I~-~~g~~lv----i~~~~I------~~~al~~L~~~-~I~av~~ 312 (545)
T 1a6d_A 250 IEAKVQIS---DPSKIQ--DFLNQETNTFKQMVEKIK-KSGANVV----LCQKGI------DDVAQHYLAKE-GIYAVRR 312 (545)
T ss_dssp SCCEEEEC---STTHHH--HHHHHHHHHHHHHHHHHH-HTTCCEE----EESSCB------CHHHHHHHHHH-TCEEECS
T ss_pred CCceEEeC---CHHHHH--HHHHHHHHHHHHHHHHHH-HhCCCEE----EECCCc------cHHHHHHHHHC-CeeEecc
Confidence 43333211 566776 899999999888888886 4566643 667766 46699999999 9999988
Q ss_pred CCCCCC
Q psy2832 340 TEELRE 345 (362)
Q Consensus 340 ~~~~~~ 345 (362)
++..+.
T Consensus 313 ~~k~~l 318 (545)
T 1a6d_A 313 VKKSDM 318 (545)
T ss_dssp CCHHHH
T ss_pred CCHHHH
Confidence 765443
No 45
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.00 E-value=1.1e-12 Score=130.45 Aligned_cols=194 Identities=8% Similarity=0.104 Sum_probs=137.8
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeE------eceeeccccCCccCcccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVL------RGVMLNKDVTHPKMRRRI 186 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv------~Giv~~~~~~~~~m~~~~ 186 (362)
+||..+.++|+.+.+.+++.++.+..... .+..+...+.+++.++++ |++. ..++.++ | ..+
T Consensus 107 ihP~~I~~G~~~A~~~a~~~L~~~~~~~~----~~~~~~~~l~~va~tsl~-sK~~~~~~~i~~livdA------v-~~V 174 (512)
T 3iyg_Q 107 LSVSEVIEGYEIACKKAHEILPDLVCCSA----KNLRDVDEVSSLLHTSVM-SKQYGNEVFLAKLIAQA------C-VSI 174 (512)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhcccC----CCCCCHHHHHHHHHHHhC-CCCccchHHHHHHHHHH------H-HHH
Confidence 68999999999999999999998743110 011111223445555554 4432 2222221 0 111
Q ss_pred c--CceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHH
Q psy2832 187 E--NPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKI 264 (362)
Q Consensus 187 ~--~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~ 264 (362)
. +..+.+.++.+.+.+|+++.||++++|++|++.+.| ||++++||||++++| ++++.+++....+
T Consensus 175 ~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~-----------~le~~~~e~k~~v 241 (512)
T 3iyg_Q 175 FPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSC-----------PFDGMITETKGTV 241 (512)
T ss_pred hccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC--CCcccccCceEEEec-----------ccccccccccceE
Confidence 1 235777778899999999999999999999999876 999999999999999 8887766654443
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCC
Q psy2832 265 LQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELR 344 (362)
Q Consensus 265 ~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~ 344 (362)
... +++++. .+.+.+++++...++.|+ +.|.+.+ +++.+|.. ..+++|.+. |+.++++++..+
T Consensus 242 ~Is---~~~~l~--~~~~~E~~~l~~~v~~I~-~~g~~vv----i~~~~I~~------la~~~l~k~-~I~av~~~~~~d 304 (512)
T 3iyg_Q 242 LIK---SAEELM--NFSKGEENLMDAQVKAIA-DTGANVV----VTGGRVAD------MALHYANKY-NIMLVRLNSKWD 304 (512)
T ss_pred EeC---CHHHHH--HHHHHHHHHHHHHHHHHH-HhCCCEE----EECCCccH------HHHHHHHHC-CeEEEEeCCHHH
Confidence 221 566777 889999999988888887 4677643 66777654 589999998 999999988765
Q ss_pred CCCC
Q psy2832 345 EEDV 348 (362)
Q Consensus 345 ~~~l 348 (362)
.+.+
T Consensus 305 le~i 308 (512)
T 3iyg_Q 305 LRRL 308 (512)
T ss_pred HHHH
Confidence 5443
No 46
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=98.98 E-value=8.4e-14 Score=139.48 Aligned_cols=198 Identities=13% Similarity=0.132 Sum_probs=123.3
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEe-------ceeeccccCCccCccc
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLR-------GVMLNKDVTHPKMRRR 185 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~-------Giv~~~~~~~~~m~~~ 185 (362)
+||..|.++|+.+++.+++.++.++.+.+..+..+ ...+.+++.++++ |+++. -++.++ ...
T Consensus 120 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~---~~~L~~vA~tsl~-sK~~~~~~~~i~~livdA-------v~~ 188 (550)
T 3p9d_G 120 ISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSG---RELLERCARTAMS-SKLIHNNADFFVKMCVDA-------VLS 188 (550)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHSEECCCCC---------CHHHHHHHHHH-HTTTGGGHHHHHHHHHHH-------HHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchh---HHHHHHHHHHhcc-CccccccHhHHHHHHHHH-------HHH
Confidence 69999999999999999999999876543211000 1224445555554 44332 222222 011
Q ss_pred ccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHH
Q psy2832 186 IENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKIL 265 (362)
Q Consensus 186 ~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~ 265 (362)
+....+++.++.+.+.+|+++.||++++|++|++.+.||.++. +|+- +-|+ +=-=.+.++++++++...++.
T Consensus 189 V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~---~~~~-~en~----kIll~~~~Le~~k~e~~~~v~ 260 (550)
T 3p9d_G 189 LDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQ---QPKK-FNNP----KILSLNVELELKAEKDNAEVR 260 (550)
T ss_dssp CCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSC---SCSC-CSSC----CEEEECSCCSCCCCSSCEEEE
T ss_pred hCccccCchheeEEEecCCCccceeEEeeEEEecccccccccc---Cccc-ccCc----eEEEeccccccccccccceee
Confidence 2212345556788999999999999999999999999987643 3331 0011 000012234444433222211
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCC
Q psy2832 266 QLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELRE 345 (362)
Q Consensus 266 ~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~ 345 (362)
. ++++++. .+.+.|++++...++.|+ +.|++.+ +++++|. +..+++|++. |+.++.+++..+.
T Consensus 261 i---s~~~~l~--~il~~E~~~l~~~v~~I~-~~g~~vV----i~~~~I~------dla~~~L~~~-gI~~v~~v~k~~l 323 (550)
T 3p9d_G 261 V---EHVEDYQ--AIVDAEWQLIFEKLRQVE-ETGANIV----LSKLPIG------DLATQFFADR-NIFCAGRVSADDM 323 (550)
T ss_dssp E---CSSSHHH--HHHHHHHHHHHHHHHHHH-TTTCSEE----EESSCCC------HHHHHTTGGG-TCEEEECCCTTHH
T ss_pred e---CCHHHHH--HHHHHHHHHHHHHHHHHH-hcCCCEE----EECCCcc------HHHHHHHHHc-CCccccCcCHHHH
Confidence 1 1455666 888889998888888877 5677643 6777775 4589999988 9999999887654
Q ss_pred C
Q psy2832 346 E 346 (362)
Q Consensus 346 ~ 346 (362)
+
T Consensus 324 e 324 (550)
T 3p9d_G 324 N 324 (550)
T ss_dssp H
T ss_pred H
Confidence 4
No 47
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=98.97 E-value=1.4e-13 Score=137.85 Aligned_cols=208 Identities=10% Similarity=0.110 Sum_probs=137.0
Q ss_pred HHHHHHHHH----hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEe-------cee
Q psy2832 104 KLIEVIKAC----VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLR-------GVM 172 (362)
Q Consensus 104 ~ll~ia~t~----l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~-------Giv 172 (362)
+|++-+... +||..|.++|+.+.+.+++.++.++.+.+.. ..|. ..+.+++.++++ |++.. -++
T Consensus 100 eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~-~~~~---~~L~~vA~tsl~-sKi~~~~~d~la~l~ 174 (546)
T 3p9d_F 100 ELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNL-SNDR---EFLLQVARSSLL-TKVDADLTEVLTPIV 174 (546)
T ss_dssp HHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSS-STTC---HHHHHHHHHHTC-STTHHHHCSSHHHHH
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhcccccc-ccCH---HHHHHHHHHHhC-CCcchhHHHHHHHHH
Confidence 344444443 6888899999999999999999887644210 0011 123444444444 33322 122
Q ss_pred eccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeeccccccccccccee
Q psy2832 173 LNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTN 252 (362)
Q Consensus 173 ~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~ 252 (362)
.+.-.. +..-++..+.+..+.+.+.+|++..||++++|++|++.+.||+||++++||||++++| +
T Consensus 175 vdaV~~----V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~-----------~ 239 (546)
T 3p9d_F 175 TDAVLS----VYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNV-----------S 239 (546)
T ss_dssp HHHHHH----THHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECC-----------C
T ss_pred HHhheE----eecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecC-----------c
Confidence 211000 0000111345556788899999999999999999999999999999999999999999 8
Q ss_pred EEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHh----CCCeEE--eeCChhhHH
Q psy2832 253 VEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLK----ANITAI--RRVRKSDNN 326 (362)
Q Consensus 253 l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~----~~I~~i--~~v~~~~l~ 326 (362)
+++++++...++... ++++++ .+.+.++++.+.+++.|+-. +-. .++ .+..++ +.++...++
T Consensus 240 Le~~k~e~~~~~~i~---~~~~~~--~~~~~E~~~~~~~v~~I~~~-~~~------v~~~~~g~~~vIi~~k~I~~~Al~ 307 (546)
T 3p9d_F 240 LEYEKTEVNSGFFYS---SADQRD--KLAASERKFVDAKLKKIIDL-KNE------VCGMDPDKGFVIINQKGIDPMSLD 307 (546)
T ss_dssp SSSCCCSSCBCCCCC---SSSCHH--HHHHHHHHHHHHHHHHHHHC-C-----------------CEEEESSCCCHHHHH
T ss_pred ccccccccCceEEEc---CHHHHH--HHHHHHHHHHHHHHHHHHHH-HHH------HhhhccCCceEEEecCcCcHHHHH
Confidence 888776655554322 778888 99999999987777665431 100 011 111222 256778999
Q ss_pred HHHHHhCCeEccCCCCCC
Q psy2832 327 RIARACGATIVNRTEELR 344 (362)
Q Consensus 327 ~la~~tG~~iv~~~~~~~ 344 (362)
+|++. |+.++++++..+
T Consensus 308 ~L~~~-gI~~vr~v~~~~ 324 (546)
T 3p9d_F 308 VFAKH-NILALRRAKRRN 324 (546)
T ss_dssp HHTTT-TCEEECCCCHHH
T ss_pred HHHHC-CCeeEecCCHHH
Confidence 99999 999999876543
No 48
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=98.92 E-value=3.7e-13 Score=135.18 Aligned_cols=210 Identities=12% Similarity=0.147 Sum_probs=139.9
Q ss_pred HHHHHHHHH----hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEe-------cee
Q psy2832 104 KLIEVIKAC----VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLR-------GVM 172 (362)
Q Consensus 104 ~ll~ia~t~----l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~-------Giv 172 (362)
+|++-+... +||..|.++|+.+.+.+++.++.++.+.+.... |.. ...+.+++.++++ |+++. -++
T Consensus 128 ~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~-~~~-~e~L~~vA~tSl~-sK~i~~~~d~la~l~ 204 (562)
T 3p9d_E 128 ALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASND-ELF-RDFLLRAAKTSLG-SKIVSKDHDRFAEMA 204 (562)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCC-SSC-HHHHHHHHHHHHS-SSTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcc-hhh-HHHHHHHHHHhcC-CchhHHHHHHHHHHH
Confidence 444444443 688899999999999999999988654432100 000 0123344444444 33322 222
Q ss_pred eccccCCccCcccccCceEEEeecccccccCCCccceeeecccccccccccchhhccc------cCcceeeecccccccc
Q psy2832 173 LNKDVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRI------ENPRIVLLDCTLEYKK 246 (362)
Q Consensus 173 ~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i------~~~ki~~~~~~~~~~k 246 (362)
.+.-.. +....+..+.+..+.+++.+|+++.||++++|++|++.+.||+||+++ +++||++++|
T Consensus 205 vdAV~~----V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~------ 274 (562)
T 3p9d_E 205 VEAVIN----VMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTC------ 274 (562)
T ss_dssp HHHHHT----SSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEES------
T ss_pred HHHhee----ecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccccccccceEEEecc------
Confidence 221000 000011245566788999999999999999999999999999999999 9999999999
Q ss_pred cccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHH
Q psy2832 247 GESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNN 326 (362)
Q Consensus 247 ~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~ 326 (362)
++++.+.+...++.. +++++++ .+.+.+++.+...++.|.. .|++.+ +++++|. ...++
T Consensus 275 -----~le~~k~~~~~~~~I---ss~~~~~--~~~~~E~~~l~~~lekI~~-~g~~vv----I~~~~I~------~~Al~ 333 (562)
T 3p9d_E 275 -----PFEPPKPKTKHKLDI---SSVEEYQ--KLQTYEQDKFKEMIDDVKK-AGADVV----ICQWGFD------DEANH 333 (562)
T ss_dssp -----CCSSCCCSSCCCCCC---CSSSHHH--HHHHHHHHHHHHHHHHHHH-HTCSCC----EECSSCC------SHHHH
T ss_pred -----cccccccccCceEEE---CCHHHHH--HHHHHHHHHHHHHHHHHHH-cCCcEE----EEeCCCC------HHHHH
Confidence 777765432222211 1566666 8999999998888888874 566643 6667664 56999
Q ss_pred HHHHHhCCeEccCCCCCCCCCC
Q psy2832 327 RIARACGATIVNRTEELREEDV 348 (362)
Q Consensus 327 ~la~~tG~~iv~~~~~~~~~~l 348 (362)
+|++. |+.++.++...+.+.+
T Consensus 334 ~L~~~-~I~~v~~v~k~~le~i 354 (562)
T 3p9d_E 334 LLLQN-DLPAVRWVGGQELEHI 354 (562)
T ss_dssp HHHTT-TCCCEECCCTTTHHHH
T ss_pred HHHHC-CCEEEeccCHHHHHHH
Confidence 99999 9999999887665543
No 49
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=98.86 E-value=2.1e-12 Score=129.81 Aligned_cols=196 Identities=14% Similarity=0.139 Sum_probs=131.4
Q ss_pred HhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccce------eEeceeeccccCCccCcc-
Q psy2832 112 CVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSC------VLRGVMLNKDVTHPKMRR- 184 (362)
Q Consensus 112 ~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~------lv~Giv~~~~~~~~~m~~- 184 (362)
-+||..|.++|+.+.+.+++.++.++.+... |..+...+.+++.++++ |+ .+.-++.++-... .+.
T Consensus 121 GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~----~~~~~~~l~~va~tsl~-sK~~~~~~~i~~livdAv~~V--~~~~ 193 (568)
T 3p9d_H 121 GLSAVEIIQGYNMARKFTLKELDEMVVGEIT----DKNDKNELLKMIKPVIS-SKKYGSEDILSELVSEAVSHV--LPVA 193 (568)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHCCSCCC----CCCTTHHHHHHHHHHHT-TTSTTCHHHHHHHHHHHHTTS--CC--
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhccccCC----CCCCHHHHHHHHHHHhh-ccCcchHHHHHHHHHHHHHHH--hhcc
Confidence 3689999999999999999999988654310 11111123334444433 33 2333333321000 000
Q ss_pred -c-ccCceEEEeecccccccCCCccceeeecccccccccccchhhcccc---CcceeeecccccccccccceeEEEcCHH
Q psy2832 185 -R-IENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIE---NPRIVLLDCTLEYKKGESQTNVEIVNEA 259 (362)
Q Consensus 185 -~-~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~---~~ki~~~~~~~~~~k~~~~~~l~~~~~~ 259 (362)
. .....+++..+.+++.+|++++||++++|++|++.+. +||++++ ||||++++| ++++++++
T Consensus 194 ~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~--~m~~~i~~~~n~kIlll~~-----------~Le~~k~e 260 (568)
T 3p9d_H 194 QQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE--GHVKSLSEDKKHKVAVFTC-----------PLDIANTE 260 (568)
T ss_dssp -------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS--SGGGSCCCCSSCEEEEECS-----------CSSSCCCS
T ss_pred ccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc--CCcEEEecCCcceEEEEcc-----------Cccccccc
Confidence 0 0011345556788999999999999999999999874 7999999 999999999 77776654
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccC
Q psy2832 260 EFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNR 339 (362)
Q Consensus 260 ~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~ 339 (362)
...++... +++++. .+.+.+++.+...++.|+. .|++.+ |++.+|. +..+++|++. |+.++++
T Consensus 261 ~~~~v~i~---~~~~l~--~~~~~E~~~l~~~v~~I~~-~g~~vv----i~~~~I~------~~al~~L~~~-gI~av~~ 323 (568)
T 3p9d_H 261 TKGTVLLH---NAQEML--DFSKGEEKQIDAMMKEIAD-MGVECI----VAGAGVG------ELALHYLNRY-GILVLKV 323 (568)
T ss_dssp SSCEEECC---SHHHHH--HHHHHHHHHHHHHHHHHHH-TTCCEE----EECSCCC------HHHHHHHHHH-TCEEECC
T ss_pred cCceEEeC---CHHHHH--HHHHHHHHHHHHHHHHHHh-cCCeEE----EECCCcC------hHHHHHHHHC-CeEEEec
Confidence 33332111 455666 8888999999888888874 577643 6666664 5699999999 9999999
Q ss_pred CCCCC
Q psy2832 340 TEELR 344 (362)
Q Consensus 340 ~~~~~ 344 (362)
++..+
T Consensus 324 v~~~~ 328 (568)
T 3p9d_H 324 PSKFE 328 (568)
T ss_dssp CCHHH
T ss_pred CCHHH
Confidence 87543
No 50
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=98.78 E-value=6.4e-12 Score=125.46 Aligned_cols=190 Identities=18% Similarity=0.148 Sum_probs=131.0
Q ss_pred HhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCccccee-------EeceeeccccCCccCcc
Q psy2832 112 CVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCV-------LRGVMLNKDVTHPKMRR 184 (362)
Q Consensus 112 ~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~l-------v~Giv~~~~~~~~~m~~ 184 (362)
-+||..+.++|+.+.+.+++.++.++.+....+..+. ..+.+++.++++ |++ +..++.++- .
T Consensus 114 GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~---~~l~~vA~tSl~-sK~~~~~~~~i~~li~dAv-------~ 182 (527)
T 3p9d_B 114 KIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFR---EDLIHIAKTTLS-SKILSQDKDHFAELATNAI-------L 182 (527)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHH---HHHHHHHHHHHT-TSGGGGGHHHHHHHHHHHH-------H
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhH---HHHHHHHHhccc-cCcccchHHHHHHHHHHHH-------H
Confidence 4688889999999999999999998765432100000 123444544444 333 323333320 1
Q ss_pred cccCceEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHH-HHH
Q psy2832 185 RIENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAE-FTK 263 (362)
Q Consensus 185 ~~~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~-~~~ 263 (362)
.+.+. ..+..+.+++.+|+++.||++++|++|++.+.||. |++++||||++++| ++++++++. ..+
T Consensus 183 ~V~~~-~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~-----------~le~~k~~~~~~~ 249 (527)
T 3p9d_B 183 RLKGS-TNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PKRIENAKILIANT-----------TLDTDKVKIFGTK 249 (527)
T ss_dssp TTCTT-CCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-CSCCSSCEEEEECS-----------CSSCCCCSSCCCB
T ss_pred Hhccc-CCcceEEEEEcCCCCccccEEEEeEEEecccCCCC-CeeeecceEEEecc-----------ccccccccccCce
Confidence 11111 12345788998999999999999999999999997 99999999999999 777665441 122
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCC
Q psy2832 264 ILQLEEEYVEKLEEEYVEKVCNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEE 342 (362)
Q Consensus 264 ~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~ 342 (362)
+. .++++++. .+.+.+++.+...++.|+ ..|.+.+ +++.+|. ...+++|.+. |+.++++++.
T Consensus 250 v~---i~~~~~l~--~~~~~E~~~l~~~l~~I~-~~g~~vv----i~~~~I~------~~al~~L~~~-~i~av~~~~~ 311 (527)
T 3p9d_B 250 FK---VDSTAKLA--QLEKAEREKMKNKIAKIS-KFGINTF----INRQLIY------DYPEQLFTDL-GINSIEHADF 311 (527)
T ss_dssp CC---CCHHHHHH--HHHHHHHHHHHHHHHHHT-TTCCBEE----ESSCCCT------TTHHHHHHHT-CBCCCCCCHH
T ss_pred EE---EcCHHHHH--HHHHHHHHHHHHHHHHHH-hcCCCEE----EECCCCC------HHHHHHHHHC-CCEEEecCCH
Confidence 11 11555666 888899998888888887 4677643 7788884 5599999999 9999988764
No 51
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=97.49 E-value=1.1e-05 Score=80.34 Aligned_cols=94 Identities=14% Similarity=0.203 Sum_probs=61.0
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCCccCccccc-CceE
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHPKMRRRIE-NPRI 191 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~-~~~i 191 (362)
+||..|.++|+.+.+.+++.++.++.+.+.++. +.+++.++.++...+.-++.++ | ..+. +..
T Consensus 111 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~--------l~~va~iS~~~~~~i~~li~dA------v-~~V~~~g~- 174 (545)
T 1iok_A 111 MNPMDLKRGIDVATAKVVEAIKSAARPVNDSSE--------VAQVGTISANGESFIGQQIAEA------M-QRVGNEGV- 174 (545)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTT--------TTHHHHHTTTTCHHHHHHHHHH------H-HHHCTTSC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHH--------HHHHHHhhcCCchhHHHHHHHH------H-HHhccCCe-
Confidence 588899999999999999999988765432111 2233333333233333333332 1 1111 111
Q ss_pred EEeecccccccCCCccce-eeecccccccccccchhhc
Q psy2832 192 VLLDCTLEYKKGESQTNV-EIVNESDWRRSVTHPKMRR 228 (362)
Q Consensus 192 ~l~~~~l~~~~g~s~~~s-~l~~G~~~~~~~~~~~~~~ 228 (362)
+.++ +|+++.+| ++++|++|++.+.||.|.+
T Consensus 175 ----I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt 206 (545)
T 1iok_A 175 ----ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVT 206 (545)
T ss_dssp ----CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCC
T ss_pred ----EEEE--eCCccccceEEEecEEEecCcccccccc
Confidence 3333 79999999 9999999999999998743
No 52
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=97.47 E-value=1.4e-05 Score=79.80 Aligned_cols=93 Identities=14% Similarity=0.241 Sum_probs=60.6
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCCccCccccc-CceE
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHPKMRRRIE-NPRI 191 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~-~~~i 191 (362)
+||..|.++|+.+.+.+++.++.++.+.+.++ .+.+++..+.++...+.-++.++ | ..+. +..|
T Consensus 110 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e--------~l~~vA~iS~~~~~~i~~liadA------v-~~V~~dg~I 174 (547)
T 1kp8_A 110 MNPMDLKRGIDKAVTVAVEELKALSVPCSDSK--------AIAQVGTISANSDETVGKLIAEA------M-DKVGKEGVI 174 (547)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHH--------HHHHHHHHHTTSCHHHHHHHHHH------H-HHHCTTSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHH--------HHHHHHHHhccchhHHHHHHHHH------H-HHhCcCCcE
Confidence 58889999999999999999999876543211 12333333333233333333332 1 1121 2223
Q ss_pred EEeecccccccCCCccce-eeecccccccccccchhh
Q psy2832 192 VLLDCTLEYKKGESQTNV-EIVNESDWRRSVTHPKMR 227 (362)
Q Consensus 192 ~l~~~~l~~~~g~s~~~s-~l~~G~~~~~~~~~~~~~ 227 (362)
. ++ +|+++.+| ++++|++|++.+.||.|.
T Consensus 175 ~-----Ve--~G~~~~ds~~lveG~~fdkg~~~p~~v 204 (547)
T 1kp8_A 175 T-----VE--DGTGLQDELDVVEGMQFDRGYLSPYFI 204 (547)
T ss_dssp E-----EE--CCSSSSCEEEEESCEEESCCBSSTTCC
T ss_pred E-----EE--eCCccccccEEEecEEEecCccccccc
Confidence 2 23 79999999 999999999999999874
No 53
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=97.30 E-value=2.1e-05 Score=78.27 Aligned_cols=104 Identities=8% Similarity=0.050 Sum_probs=63.6
Q ss_pred HHHHHHHHH----hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCC
Q psy2832 104 KLIEVIKAC----VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTH 179 (362)
Q Consensus 104 ~ll~ia~t~----l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~ 179 (362)
+|++.+... +||..|.++|+.+.+.+++.++.++.+.+.++ .+.+++.++.+ ++.+..++.++
T Consensus 97 eLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e--------~L~~vA~iS~~-~~~i~~liadA---- 163 (546)
T 3rtk_A 97 ALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKE--------QIAATAAISAG-DQSIGDLIAEA---- 163 (546)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHH--------HHHHHHHHHHT-CHHHHHHHHHH----
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChH--------HHHhHeEEeCC-chHHHHHHHHH----
Confidence 455555554 57888999999999999999998876543211 12233333333 33333333332
Q ss_pred ccCcccc-cCceEEEeecccccccCCCccceeeecccccccccccchhhcc
Q psy2832 180 PKMRRRI-ENPRIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRR 229 (362)
Q Consensus 180 ~~m~~~~-~~~~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~ 229 (362)
| ..+ .+..| .+++. ++...+|++++|++|++.+.||.|.+.
T Consensus 164 --v-~~V~~dgvI-----~Ve~~-~~~~~ds~lveGm~fdkg~~sp~~vt~ 205 (546)
T 3rtk_A 164 --M-DKVGNEGVI-----TVEES-NTFGLQLELTEGMRFDKGYISGYFVTD 205 (546)
T ss_dssp --H-HHSCTTSEE-----EEECC-SSSSCEEEEECEEEESCCBSSGGGCSB
T ss_pred --H-HHhccCCce-----EEEec-CCcccceEEeeeEEEcCCccCcccccC
Confidence 1 111 12223 33433 245579999999999999999988543
No 54
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=97.13 E-value=4.9e-05 Score=75.79 Aligned_cols=92 Identities=13% Similarity=0.229 Sum_probs=59.5
Q ss_pred hhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCCccCccccc-CceE
Q psy2832 113 VGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTHPKMRRRIE-NPRI 191 (362)
Q Consensus 113 l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~~~m~~~~~-~~~i 191 (362)
+||..|.++|+.+.+.+++.++.++.+.+.++ .+.+++..+.. +..+.-++.++ | ..+. +..|
T Consensus 110 ihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~--------~l~~vA~iS~~-~~~i~~li~dA------v-~~V~~~g~I 173 (543)
T 1we3_A 110 ANPLALKRGIEKAVEAAVEKIKALAIPVEDRK--------AIEEVATISAN-DPEVGKLIADA------M-EKVGKEGII 173 (543)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHH--------HHHHHHHHHHT-CHHHHHHHHHH------H-HTTCTTSEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcccCCCHH--------HHHHhhhhhcC-CHHHHHHHHHH------H-HHhCcCCcE
Confidence 58889999999999999999999876543211 12233333322 23333333332 0 1121 2222
Q ss_pred EEeecccccccCCCccce-eeecccccccccccchhh
Q psy2832 192 VLLDCTLEYKKGESQTNV-EIVNESDWRRSVTHPKMR 227 (362)
Q Consensus 192 ~l~~~~l~~~~g~s~~~s-~l~~G~~~~~~~~~~~~~ 227 (362)
.++ .|+++.+| ++++|++|++.+.||.|.
T Consensus 174 -----~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~v 203 (543)
T 1we3_A 174 -----TVE--ESKSLETELKFVEGYQFDKGYISPYFV 203 (543)
T ss_dssp -----EEE--ECSSSSCEEEEECSEEESCCBSSGGGC
T ss_pred -----EEe--cCCccccceEEEcCEEEecCccccccc
Confidence 233 79999999 999999999999999874
No 55
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=97.08 E-value=0.00032 Score=59.56 Aligned_cols=43 Identities=86% Similarity=1.348 Sum_probs=36.4
Q ss_pred ccceeEeceeeccccCCccCcccccCceEEEeecccccccCCC
Q psy2832 163 EDSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGES 205 (362)
Q Consensus 163 ~dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s 205 (362)
+||++++|+++++++.+++||+.++||+|+++++++++.....
T Consensus 2 ~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~ 44 (178)
T 1gml_A 2 EDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 44 (178)
T ss_dssp -CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC----
T ss_pred CCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccC
Confidence 5799999999999999989999999999999999999876543
No 56
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=96.59 E-value=0.0068 Score=51.22 Aligned_cols=68 Identities=25% Similarity=0.239 Sum_probs=48.3
Q ss_pred CCCcEEEeCCCCCHHHHHHHHh------CCCeEEeeCC-----hhhHHHHHHHhCCeEccC-----CCCCCCCCCCCCcc
Q psy2832 290 LKPDLIFTEKGISDLAQHFLLK------ANITAIRRVR-----KSDNNRIARACGATIVNR-----TEELREEDVGTGAG 353 (362)
Q Consensus 290 ~~v~~I~~~~gi~~~~~~~l~~------~~I~~i~~v~-----~~~l~~la~~tG~~iv~~-----~~~~~~~~lG~~~~ 353 (362)
.++=+|+ ...|+..|+.-|.- .++.+++... +..++-+|-+||+.+++. +++.+.+.+|+ |.
T Consensus 59 ~kpLlII-AedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~ 136 (194)
T 3m6c_A 59 GKPLLIV-AEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGS-AR 136 (194)
T ss_dssp TCCEEEE-ESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EE
T ss_pred CCCeEEE-ecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCC-cc
Confidence 3554444 57898888775442 3456666553 667899999999999974 45667889999 78
Q ss_pred eEEEEe
Q psy2832 354 LFEIKK 359 (362)
Q Consensus 354 ~~~~~~ 359 (362)
.+.+.+
T Consensus 137 ~v~vtk 142 (194)
T 3m6c_A 137 RVVVSK 142 (194)
T ss_dssp EEEECS
T ss_pred EEEEcC
Confidence 887654
No 57
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=96.36 E-value=0.016 Score=46.67 Aligned_cols=77 Identities=19% Similarity=0.253 Sum_probs=52.7
Q ss_pred HHHHHHHhCCCcEEEeCCCCCHHHHHHHHh------CCCeEEeeC-----ChhhHHHHHHHhCCeEccC-----CCCCCC
Q psy2832 282 KVCNDIIALKPDLIFTEKGISDLAQHFLLK------ANITAIRRV-----RKSDNNRIARACGATIVNR-----TEELRE 345 (362)
Q Consensus 282 ~~~~~i~~~~v~~I~~~~gi~~~~~~~l~~------~~I~~i~~v-----~~~~l~~la~~tG~~iv~~-----~~~~~~ 345 (362)
-..++..+.+-.+++....|+..|+.-|.- .++.+++.. .+..++-+|-.||+.+++. +++.+.
T Consensus 44 P~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~ 123 (145)
T 1srv_A 44 PILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATL 123 (145)
T ss_dssp HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCG
T ss_pred HHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCH
Confidence 334555555545666567899888875542 344555554 4778999999999999966 334567
Q ss_pred CCCCCCcceEEEEe
Q psy2832 346 EDVGTGAGLFEIKK 359 (362)
Q Consensus 346 ~~lG~~~~~~~~~~ 359 (362)
+.+|+ |..+.+.+
T Consensus 124 ~~LG~-a~~v~vtk 136 (145)
T 1srv_A 124 SMLGR-AERVRITK 136 (145)
T ss_dssp GGCEE-EEEEEECS
T ss_pred hHCCc-cCEEEEcC
Confidence 78999 78887654
No 58
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=96.00 E-value=0.031 Score=47.38 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=52.3
Q ss_pred HHHHHHhCCCcEEEeCCCCCHHHHHHHHh------CCCeEEeeCC-----hhhHHHHHHHhCCeEccC-----CCCCCCC
Q psy2832 283 VCNDIIALKPDLIFTEKGISDLAQHFLLK------ANITAIRRVR-----KSDNNRIARACGATIVNR-----TEELREE 346 (362)
Q Consensus 283 ~~~~i~~~~v~~I~~~~gi~~~~~~~l~~------~~I~~i~~v~-----~~~l~~la~~tG~~iv~~-----~~~~~~~ 346 (362)
..+...+.+-.+++....|+..|+.-|.- .++.+++... +..++-||-+||+.+++. +++.+.+
T Consensus 58 ~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~ 137 (201)
T 3osx_A 58 VLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLE 137 (201)
T ss_dssp HHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGG
T ss_pred HHHHHHHhCCCeEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHh
Confidence 34455555444555557898887765442 4456666654 667999999999999975 4556778
Q ss_pred CCCCCcceEEEEe
Q psy2832 347 DVGTGAGLFEIKK 359 (362)
Q Consensus 347 ~lG~~~~~~~~~~ 359 (362)
.+|+ |..+.+.+
T Consensus 138 ~LG~-a~~V~vtk 149 (201)
T 3osx_A 138 DLGQ-AKRVVINK 149 (201)
T ss_dssp GCEE-EEEEEECS
T ss_pred hCCC-ccEEEEcC
Confidence 9999 78887654
No 59
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=95.37 E-value=0.007 Score=50.19 Aligned_cols=37 Identities=38% Similarity=0.694 Sum_probs=33.1
Q ss_pred EeceeeccccCCccCcccccCceEEEeecccccccCC
Q psy2832 168 LRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGE 204 (362)
Q Consensus 168 v~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~ 204 (362)
++|+++++++.+++||+.++||+|+++++++++....
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e 37 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTE 37 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHH
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccc
Confidence 4799999999999999999999999999999976543
No 60
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=74.27 E-value=9.8 Score=29.99 Aligned_cols=50 Identities=12% Similarity=0.155 Sum_probs=39.3
Q ss_pred HHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCe
Q psy2832 285 NDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGAT 335 (362)
Q Consensus 285 ~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~ 335 (362)
+.|...+|++|++ +++.+-+...|.++||.++.......-+.+.+...+.
T Consensus 70 ~~L~~~gv~vVI~-g~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 70 NFVKEKGAELVIV-RGIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHTTCSEEEC-SCCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEE-CCCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 4456689999998 5899999999999999999877666666666664443
No 61
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=71.89 E-value=11 Score=28.73 Aligned_cols=51 Identities=20% Similarity=0.189 Sum_probs=39.5
Q ss_pred HHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCe
Q psy2832 284 CNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGAT 335 (362)
Q Consensus 284 ~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~ 335 (362)
.+.+...+|++|++ +++.+-+...|.++||.++.......-+-+.+...+.
T Consensus 56 ~~~L~~~gv~~vi~-~~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 56 PNFIKDHGAKIVLT-YGIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHTTCCEEEC-SBCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEE-CCCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 34556689999998 5799999999999999999876665666666664443
No 62
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=67.13 E-value=14 Score=28.16 Aligned_cols=49 Identities=12% Similarity=0.072 Sum_probs=37.7
Q ss_pred HHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCCh-hhHHHHHHHhC
Q psy2832 284 CNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRK-SDNNRIARACG 333 (362)
Q Consensus 284 ~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~-~~l~~la~~tG 333 (362)
.+.+...+|++|+| +++.+-+...|.++||.++..... ..-+-+.+...
T Consensus 60 ~~~l~~~gv~~vi~-~~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~ 109 (120)
T 2wfb_A 60 AQVLAKSGAGVLLT-GYVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLD 109 (120)
T ss_dssp HHHHHHHTEEEEEC-SCCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHT
T ss_pred HHHHHHCCCCEEEE-CCCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHc
Confidence 34556689999998 579999999999999999986655 55555555543
No 63
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=66.40 E-value=18 Score=27.70 Aligned_cols=50 Identities=12% Similarity=-0.004 Sum_probs=39.0
Q ss_pred HHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCe
Q psy2832 285 NDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGAT 335 (362)
Q Consensus 285 ~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~ 335 (362)
+.+...+|++|+| +++.+-+...|.++||.++.......-+-+.+.....
T Consensus 59 ~~l~~~gv~~vi~-~~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 59 QIIANNGVKAVIA-SSPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHTTCCEEEE-CCSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHCCCCEEEE-CCcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 4455689999998 5799999999999999999876665566666654443
No 64
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=63.87 E-value=22 Score=27.89 Aligned_cols=50 Identities=4% Similarity=0.022 Sum_probs=37.5
Q ss_pred HHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCe
Q psy2832 284 CNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGAT 335 (362)
Q Consensus 284 ~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~ 335 (362)
.+.+...+|++|+| +++.+-+...|.+ ||.++.......-+-+.....+.
T Consensus 72 ~~~L~~~gv~~VI~-g~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 72 LKSALDHGANALVL-SEIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHTTCSEEEE-SCCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEE-CCCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 34455679999998 5899999999999 99999876645555555554433
No 65
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=57.43 E-value=21 Score=26.90 Aligned_cols=50 Identities=10% Similarity=0.092 Sum_probs=38.3
Q ss_pred HHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCe
Q psy2832 285 NDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGAT 335 (362)
Q Consensus 285 ~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~ 335 (362)
+.+...+|++|++ +++.+-+...|.++||.++.......-+-+.+...+.
T Consensus 56 ~~l~~~gv~~vi~-~~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 56 QSLVSKGVEYLIA-SNVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHTTTCCEEEC-SSCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEE-CCCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 4455689999998 5788889999999999999876665666666654443
No 66
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=53.90 E-value=44 Score=24.55 Aligned_cols=45 Identities=18% Similarity=0.118 Sum_probs=35.4
Q ss_pred HHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhC
Q psy2832 287 IIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACG 333 (362)
Q Consensus 287 i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG 333 (362)
+...+|++|+| +++.+-+...|.++ |.++.......-+-+.+...
T Consensus 52 l~~~gv~~vi~-~~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~ 96 (105)
T 2qtd_A 52 IVKENVNAIIC-KNISEENYKKFSKK-IEIYHAEGDDVDKNISLFIE 96 (105)
T ss_dssp HHHTCCSEEEE-SCCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHT
T ss_pred HHHCCCCEEEE-CCCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHc
Confidence 44589999998 58999999999999 99998666555566655543
No 67
>1p90_A NAFY protein, hypothetical protein; ribonuclease H motif, protein binding; 1.80A {Azotobacter vinelandii} SCOP: c.55.5.2
Probab=26.46 E-value=1.2e+02 Score=23.80 Aligned_cols=29 Identities=14% Similarity=0.308 Sum_probs=26.3
Q ss_pred CCCcEEEeCCCCCHHHHHHHHhCCCeEEee
Q psy2832 290 LKPDLIFTEKGISDLAQHFLLKANITAIRR 319 (362)
Q Consensus 290 ~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~ 319 (362)
.+|++|+| +++.+-+...|.++||.++..
T Consensus 66 ~g~~vvi~-~~iG~~a~~~L~~~GI~v~~~ 94 (145)
T 1p90_A 66 QDCQVLYV-VSIGGPAAAKVVRAGIHPLKK 94 (145)
T ss_dssp TTCSEEEE-SBCCHHHHHHHHHTTCEEEEC
T ss_pred CCCCEEEE-CCCCHHHHHHHHHcCCEEEEe
Confidence 48999998 589999999999999999876
No 68
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=21.47 E-value=1.9e+02 Score=25.44 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=26.0
Q ss_pred HHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEe
Q psy2832 284 CNDIIALKPDLIFTEKGISDLAQHFLLKANITAIR 318 (362)
Q Consensus 284 ~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~ 318 (362)
.+.++..+||+|+.....+.-....|.+.||-++-
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~ 111 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVA 111 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEE
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEE
Confidence 36788899999997654455556778899987764
No 69
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=20.71 E-value=1.8e+02 Score=22.59 Aligned_cols=37 Identities=27% Similarity=0.303 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH
Q psy2832 53 LAGEMLNVAEKFLSDQMHPTVIIKAYRSALEDMVNILE 90 (362)
Q Consensus 53 L~~~ll~~~~~li~~gi~p~~ii~g~~~a~~~~~~~l~ 90 (362)
++-.+|++|.+++++| +|.+-.+=|-.|...+++.|-
T Consensus 6 lAe~yL~EA~ell~kG-D~vQAsEK~ykAaeeaiKALA 42 (129)
T 2jpu_A 6 SAEVYYEEAEEFLSKG-DLVQACEKYYKAAEEAIKLLV 42 (129)
T ss_dssp HHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHHHHH
Confidence 5778999999999998 666666656666777777665
Done!