Query psy2832
Match_columns 362
No_of_seqs 163 out of 1778
Neff 8.5
Searched_HMMs 13730
Date Fri Aug 16 18:03:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2832.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2832hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gmla_ c.8.5.2 (A:) Thermosom 100.0 6.8E-30 5E-34 216.5 14.0 147 208-362 1-147 (168)
2 d1a6db2 c.8.5.2 (B:216-367) Th 100.0 1.8E-29 1.3E-33 209.9 12.7 140 214-362 1-140 (152)
3 d1q3qa2 c.8.5.2 (A:217-369) Th 100.0 4E-29 2.9E-33 208.3 14.2 141 213-362 1-141 (153)
4 d1assa_ c.8.5.2 (A:) Thermosom 100.0 1.9E-29 1.3E-33 210.0 9.9 142 212-362 1-142 (152)
5 d1q3qa1 a.129.1.2 (A:9-145,A:4 99.9 8.7E-24 6.4E-28 190.6 13.2 136 1-137 43-180 (258)
6 d1a6db1 a.129.1.2 (B:20-144,B: 99.9 2.5E-22 1.8E-26 179.0 13.9 136 1-137 30-168 (243)
7 d1a6da1 a.129.1.2 (A:17-145,A: 99.9 3.6E-22 2.6E-26 178.6 11.8 136 1-137 34-171 (245)
8 d1kp8a1 a.129.1.1 (A:2-136,A:4 99.8 1.2E-19 8.8E-24 162.7 14.0 135 1-136 38-176 (252)
9 d1ioka1 a.129.1.1 (A:2-136,A:4 99.7 1.1E-17 8E-22 149.8 13.7 134 1-135 38-175 (252)
10 d1we3a1 a.129.1.1 (A:3-138,A:4 99.5 1.7E-14 1.2E-18 129.1 13.2 97 1-98 37-137 (255)
11 d1q3qa3 d.56.1.2 (A:146-216,A: 99.4 1E-14 7.6E-19 112.4 2.8 100 97-200 1-100 (107)
12 d1sjpa1 a.129.1.1 (A:62-134,A: 99.4 4.3E-14 3.1E-18 119.4 6.4 109 24-135 3-111 (180)
13 d1a6da3 d.56.1.2 (A:146-214,A: 99.4 1.6E-14 1.1E-18 110.8 3.3 96 100-199 1-96 (105)
14 d1a6db3 d.56.1.2 (B:145-215,B: 99.4 1.2E-14 8.4E-19 112.1 0.1 98 100-199 3-105 (107)
15 d1q3qa3 d.56.1.2 (A:146-216,A: 98.4 2.8E-09 2.1E-13 81.4 -5.0 54 190-246 49-102 (107)
16 d1a6db3 d.56.1.2 (B:145-215,B: 98.3 9.9E-09 7.2E-13 78.2 -4.1 53 190-243 48-105 (107)
17 d1a6da3 d.56.1.2 (A:146-214,A: 98.1 7.3E-08 5.3E-12 72.9 -3.1 57 190-249 46-102 (105)
18 d1sjpa2 c.8.5.1 (A:189-372) Gr 97.2 0.001 7.4E-08 54.6 10.0 75 284-359 46-136 (184)
19 d1kida_ c.8.5.1 (A:) GroEL, A 97.1 0.00048 3.5E-08 57.0 7.6 68 290-359 61-144 (193)
20 d1srva_ c.8.5.1 (A:) GroEL, A 97.0 0.0015 1.1E-07 51.3 9.1 74 284-359 46-136 (145)
21 d1ioka2 c.8.5.1 (A:191-366) Gr 96.7 0.00064 4.6E-08 55.4 4.8 68 290-359 54-137 (176)
22 d1gmla_ c.8.5.2 (A:) Thermosom 96.7 0.00049 3.6E-08 55.8 3.8 42 164-205 1-42 (168)
23 d1assa_ c.8.5.2 (A:) Thermosom 94.8 0.0061 4.4E-07 48.2 2.5 35 168-202 1-35 (152)
24 d1q3qa2 c.8.5.2 (A:217-369) Th 94.5 0.016 1.2E-06 45.6 4.5 37 169-205 1-37 (153)
25 d1a6db2 c.8.5.2 (B:216-367) Th 94.1 0.013 9.6E-07 46.1 3.1 35 170-204 1-35 (152)
26 d1eo1a_ c.55.5.1 (A:) Hypothet 80.8 2 0.00014 31.4 6.6 62 285-351 59-120 (124)
27 d1sjpa3 d.56.1.1 (A:135-188,A: 80.2 2.1 0.00015 29.6 6.0 64 101-183 4-68 (89)
28 d1o13a_ c.55.5.1 (A:) Hypothet 67.6 8.7 0.00064 26.7 7.1 44 287-331 60-103 (107)
29 d1rdua_ c.55.5.1 (A:) Hypothet 59.6 5.6 0.00041 28.4 4.6 46 286-332 57-102 (116)
30 d1kp8a3 d.56.1.1 (A:137-190,A: 59.2 3.6 0.00026 28.8 3.3 63 101-181 4-67 (97)
31 d1p90a_ c.55.5.2 (A:) NafY cor 45.6 29 0.0021 24.6 6.8 44 288-332 64-111 (123)
32 d1ioka3 d.56.1.1 (A:137-190,A: 43.6 4.5 0.00033 28.3 1.6 62 101-180 4-66 (97)
33 d1l0ba2 c.15.1.3 (A:1705-1801) 34.9 19 0.0014 24.8 3.7 32 318-350 14-45 (97)
34 d1we3a3 d.56.1.1 (A:139-189,A: 31.2 68 0.005 21.3 6.8 58 101-177 2-60 (86)
35 d2phza1 c.92.2.4 (A:20-296) Ir 24.1 80 0.0058 25.0 6.9 51 284-334 70-124 (277)
36 d1vhba_ a.1.1.2 (A:) Bacterial 22.3 1.3E+02 0.0092 21.4 8.9 58 28-87 73-130 (144)
37 d1v66a_ a.140.2.1 (A:) p53 bin 22.0 64 0.0047 20.2 4.2 25 55-79 35-62 (65)
No 1
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=99.96 E-value=6.8e-30 Score=216.48 Aligned_cols=147 Identities=67% Similarity=1.077 Sum_probs=129.3
Q ss_pred ceeeecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy2832 208 NVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDI 287 (362)
Q Consensus 208 ~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i 287 (362)
||++++|+++++.+.|++||+.+++|||++++|++++++++.++++.+++++++..+...|++ ++.+++++|
T Consensus 1 DS~li~Gvvi~k~~~~~~m~~~i~~~kIlll~~~le~~~~~~~~~i~i~~~~~l~~~~~~E~~--------~l~~~v~~I 72 (168)
T d1gmla_ 1 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEE--------YIHQLCEDI 72 (168)
T ss_dssp CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHH--------HHHHHHHHH
T ss_pred CcEEEEEEEEecccCCcCCccccCCceEEEEeccccccccccccceecCCHHHHHHHHHHHHH--------HHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999999999998888 999999999
Q ss_pred HhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 288 IALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 288 ~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
.+.+||+|+++++|++.|+++|.++||++++++++.+++|||++|||.+++++++++++++|++|..++++++|+
T Consensus 73 ~~~g~~vv~~~~~I~~~a~~~L~~~gI~~~~rv~~~dl~ria~~tga~iv~si~~l~~~~lG~~~~~~~~~~~~~ 147 (168)
T d1gmla_ 73 IQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGD 147 (168)
T ss_dssp HTTCCSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETT
T ss_pred HhcCCceEEEcCCCCHHHHHHHHHCCCeeeccCCHHHHHHHHHHHCCceeCchhhcCcccccccccEEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999889999988875
No 2
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.96 E-value=1.8e-29 Score=209.91 Aligned_cols=140 Identities=37% Similarity=0.561 Sum_probs=136.6
Q ss_pred ccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCc
Q psy2832 214 ESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKPD 293 (362)
Q Consensus 214 G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v~ 293 (362)
|++++|.+.|++||+++++|||++++|+++++++++++++.+++++++..+...|++ ++.+++++|...++|
T Consensus 1 Gvv~~k~~~~~~mpk~i~~~kIlll~~~Le~~k~~~~~~i~i~~~~~~~~~~~~E~~--------~l~~~v~~i~~~g~n 72 (152)
T d1a6db2 1 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEEN--------MLREMVDKIKSVGAN 72 (152)
T ss_dssp EEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHH--------HHHHHHHHHHHTTCC
T ss_pred CEEEeccCCCCCCCCcccCCcEEEEecccccccccccceeeecCHHHHHHHHHHHHH--------HHHHHHHHHhccCCc
Confidence 889999999999999999999999999999999999999999999999999988888 999999999999999
Q ss_pred EEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 294 LIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 294 ~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
+|++++||++.++++|.++||++++++++.+++|||++|||.+++++++++++++|+ |+.|+++++|+
T Consensus 73 vv~~~k~Idd~a~~~l~k~gI~~v~~v~~~dl~rla~~tGa~iv~s~~~l~~~~LG~-~~~v~~~~~g~ 140 (152)
T d1a6db2 73 VVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGT-AERVEQVKVGE 140 (152)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCEESCGGGCCGGGCEE-EEEEEEEEETT
T ss_pred eEEecCCCcHHHHHHHHHcCcchhccCCHHHHHHHHHHhCCeeecchhhCCcccCcC-ceEEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999 79999999985
No 3
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.96 E-value=4e-29 Score=208.29 Aligned_cols=141 Identities=36% Similarity=0.611 Sum_probs=137.2
Q ss_pred cccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC
Q psy2832 213 NESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALKP 292 (362)
Q Consensus 213 ~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~v 292 (362)
.|+++++.+.|++||++++||||++++|++++++++.++++.+++++++..+...|++ ++.++++++...++
T Consensus 1 kGvv~~k~~~~~~mp~~i~n~kIlll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~--------~l~~~v~~I~~~g~ 72 (153)
T d1q3qa2 1 RGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEK--------MLKDMVDHIAQTGA 72 (153)
T ss_dssp SSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHH--------HHHHHHHHHHHHTC
T ss_pred CeEEEeCCCCCccCCcccCCccEEEEecccccccccccceEEecCHHHHHHHHHHHHH--------HHHHHHHHHhccCc
Confidence 4899999999999999999999999999999999999999999999999999998888 99999999999999
Q ss_pred cEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 293 DLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 293 ~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
|+|++++||++.++++|.++||++++++++.+++|||++|||.+++++++++++.+|+ |+.|+++.+|+
T Consensus 73 nvvl~~k~I~~~a~~~l~~~gI~~v~~v~~~dl~ria~~tGa~iv~si~~l~~~~LG~-~~~~~~~~~g~ 141 (153)
T d1q3qa2 73 NVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGY-AEVVEERKLAG 141 (153)
T ss_dssp CEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEE-ESEEEEEEETT
T ss_pred cceeecCCCcHHHHHHHHHcCCceeccCCHHHHHHHHHhhCCEEecchhhCCcccCee-eEEEEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999 89999999885
No 4
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.96 E-value=1.9e-29 Score=210.01 Aligned_cols=142 Identities=32% Similarity=0.501 Sum_probs=138.1
Q ss_pred ecccccccccccchhhccccCcceeeecccccccccccceeEEEcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCC
Q psy2832 212 VNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGESQTNVEIVNEAEFTKILQLEEEYVEKLEEEYVEKVCNDIIALK 291 (362)
Q Consensus 212 ~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~~ 291 (362)
++|+++++.+.|+.||+.++||||++++|++++++++.++++.+++++++..+...|++ ++.+++++|...+
T Consensus 1 i~Gvv~~k~~~~~~mp~~i~~~kI~ll~~~Le~~k~~~~~~i~i~~~~~l~~~~~~E~~--------~l~~~v~~I~~~g 72 (152)
T d1assa_ 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETN--------TFKQMVEKIKKSG 72 (152)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHH--------HHHHHHHHHHHTT
T ss_pred CeEEEEeCccCCCCCCccccCceEEEEecccccccccccceeeeCCHHHHHHHHHHHHH--------HHHHHHHHHHhcc
Confidence 57999999999999999999999999999999999999999999999999999998888 9999999999999
Q ss_pred CcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCCcceEEEEecCC
Q psy2832 292 PDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTGAGLFEIKKVKT 362 (362)
Q Consensus 292 v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~~~~~~~~~~~~ 362 (362)
+|+|+++++|++.++++|.++||++++++++.+++|||++|||.+++++++++++++|+ |+.|+++++|+
T Consensus 73 ~nvvl~~~~I~~~a~~~l~k~gI~~v~~v~~~dl~ria~atGa~iv~s~~~l~~~~LG~-~~~v~~~~ig~ 142 (152)
T d1assa_ 73 ANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGE-AETVEERKIGD 142 (152)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEE-EEEEEEEEETT
T ss_pred cceEEEeccccHHHHHHHHHcCCccccCCCHHHHHHHHHHhCCceeCCcccCCcccCee-eeEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999 89999999885
No 5
>d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.90 E-value=8.7e-24 Score=190.61 Aligned_cols=136 Identities=40% Similarity=0.609 Sum_probs=116.7
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|+++|||||+||+++++++||.++|+++++.+|++++||||||+++|+++||+++.+++..|+||..|++||+.
T Consensus 43 ~i~~~~g~~~iT~Dg~ti~~~~~~~~~~a~~~~~~a~~~~~~~GDGttt~~vLa~~ll~~~~~li~~G~~p~~i~~g~~~ 122 (258)
T d1q3qa1 43 MLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYAL 122 (258)
T ss_dssp EEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEECCCCCeEEeccHHHHHHHhhhhHHHHHHHHHHHHHHHHHHccccchhHHhHHHHHhhhHHHHhcCCChhHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCC--CCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhc
Q psy2832 81 ALEDMVNILETKVSTP--LDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVT 137 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~--v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~ 137 (362)
|.+.++++|+ +.+.. ++..+...+..........+.+......+.+...+++..+.
T Consensus 123 a~~~~~~~l~-~~~~~~~~~~~g~~ei~~a~~l~~~a~~~~~~~~~a~~~~a~Al~~Ip 180 (258)
T d1q3qa1 123 AAEKAQEILD-EIAIRAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIP 180 (258)
T ss_dssp HHHHHHHHHH-HHCEEEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHHH-HhhhhhccCCCchHHHHHHHHHHhhhcccchHHHHHHHHHHHhccchh
Confidence 9999999999 77642 23336666666666666666555666666677777776654
No 6
>d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.87 E-value=2.5e-22 Score=179.00 Aligned_cols=136 Identities=38% Similarity=0.616 Sum_probs=109.5
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|++++||||+||++++.++||.++++++++++|+.++||||||+++|+++||+++.+++..|+||..|++||+.
T Consensus 30 ~i~~~~g~~~iT~Dg~ti~~~~~~~~~~a~~~~~~~~~~~~~~GDGttt~~vl~~~ll~~~~~~i~~G~~p~~I~~g~~~ 109 (243)
T d1a6db1 30 MLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRM 109 (243)
T ss_dssp EEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEECCCCCeEEecchhhHhhhhhccchHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCcCC--HHHHHHHHHHHh-hcccccchHHHHHHHHHHHHhhhc
Q psy2832 81 ALEDMVNILETKVSTPLDKSD--RSKLIEVIKACV-GTKFIGKWSDLACNIALDAVQTVT 137 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~~~~--~~~ll~ia~t~l-~~k~i~~~~~~~~~l~~~ai~~i~ 137 (362)
|.+.+++.|+ +++.++.... -.....++...- ..+.+..-.+.+.+...+|+..+.
T Consensus 110 a~~~~~~~L~-~~a~~v~~~~ggGa~e~~~a~~l~~~a~~~~g~~q~~i~~~a~Ale~ip 168 (243)
T d1a6db1 110 ASEEAKRVID-EISTKIAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIP 168 (243)
T ss_dssp HHHHHHHHHH-HHCEECEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHH-hhccccccccCCCchhHHHHHHHhhhhhccCCHHHHHHHHHHHHhhccC
Confidence 9999999999 8887764321 112222332221 112222334556667777776653
No 7
>d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.86 E-value=3.6e-22 Score=178.60 Aligned_cols=136 Identities=33% Similarity=0.586 Sum_probs=108.3
Q ss_pred CccCCCCCeEEeccHHHHHhhccccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRS 80 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~ 80 (362)
||+++.|++++||||+||++++.++||.++++++++++|+.++||||||+++|+++||+++++++..|+||..|++||+.
T Consensus 34 ~i~~~~g~~~it~Dg~ti~~~~~~~~~~a~~~~~~~~~~~~~~GDGttt~ivla~~ll~~~~~ll~~G~~p~~i~~g~~~ 113 (245)
T d1a6da1 34 MLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRL 113 (245)
T ss_dssp EEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred EEEcCCCCeEEeccHhHHhhhcchhhHHHHHHHHHHHhhHHhhcccchhhHHHHHHHHHHHHHHHHCCCCchhhhhhHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCC--cCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhc
Q psy2832 81 ALEDMVNILETKVSTPLD--KSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVT 137 (362)
Q Consensus 81 a~~~~~~~l~~~~~~~v~--~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~ 137 (362)
|++.+++.|+ +++.+.. ......+.-..+....++.+..-.+.+.+.+.+|+..+.
T Consensus 114 a~~~a~~~L~-~~a~~~~v~g~ga~e~~l~~~l~~~a~~~~g~eq~a~~~~a~Ale~ip 171 (245)
T d1a6da1 114 AVNEARKIID-EIAEKSFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIP 171 (245)
T ss_dssp HHHHHHHHHH-HHCEECEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHH-hhccceeecCchhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHhhhh
Confidence 9999999999 8765532 112222211111111122233334566677777777663
No 8
>d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]}
Probab=99.81 E-value=1.2e-19 Score=162.71 Aligned_cols=135 Identities=23% Similarity=0.321 Sum_probs=118.8
Q ss_pred CccCCCCCeEEeccHHHHHhhccccCh----hhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHP----AGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIK 76 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP----~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~ 76 (362)
||.+..|.+.+||||+||++++++.|| .++++++++.++++++||||||+++|+++|++++.+++..|+||..+.+
T Consensus 38 ~i~~~~g~~~iTkDg~ti~~~i~~~d~~e~~~a~~~~~~a~~~~~~~GDgttt~~vla~~ll~~~~~~i~~G~~p~~i~~ 117 (252)
T d1kp8a1 38 VLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKR 117 (252)
T ss_dssp EECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEEcCCCCeEEEecchheeecccccchHHHHHHHHHHHHHHhhhHHhccccchhHHHHHHHHHHHHHHHHcCCcchhhhh
Confidence 456778999999999999999999999 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhh
Q psy2832 77 AYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTV 136 (362)
Q Consensus 77 g~~~a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i 136 (362)
||+.+.+.+++.|+ +++.++...+...+...+.++...+......+....++.+|+...
T Consensus 118 gi~~a~~~v~~~L~-~~s~~i~~~~~~~~v~~~~~~~~~k~~n~d~~iG~~Iv~~Al~~p 176 (252)
T d1kp8a1 118 GIDKAVTVAVEELK-ALSVGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAP 176 (252)
T ss_dssp HHHHHHHHHHHHHH-HHCBCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHH
T ss_pred hhhhHHHHHHHHHH-hcceeeccCchhhhhHHHHHhhhhcccCccHHHhHHHHHHHHHHH
Confidence 99999999999999 999999776777777888777666654444455567777776543
No 9
>d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.73 E-value=1.1e-17 Score=149.83 Aligned_cols=134 Identities=21% Similarity=0.292 Sum_probs=116.7
Q ss_pred CccCCCCCeEEeccHHHHHhhccccCh----hhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITVQHP----AGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIK 76 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~~hP----~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~ 76 (362)
||.+..|.+.|||||+||++.+++.|| .++++.+++.+|++++||||||.++|+.+|++++.+++..|+||..+.+
T Consensus 38 ~i~~~~g~~~ITkDg~TI~~~i~~~~~~e~~~a~l~~~~a~~~~~~~gDgttt~~vla~~ll~~g~~~l~~G~~p~~i~~ 117 (252)
T d1ioka1 38 VIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKR 117 (252)
T ss_dssp EECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEEcCCCCceEEcCCceeeeccccCChHHHHHHHHHHHHHHHHHHHHHhhhchhHHHHHHHHHHHHHHHHcCCCcchhhh
Confidence 456778999999999999999999999 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhh
Q psy2832 77 AYRSALEDMVNILETKVSTPLDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQT 135 (362)
Q Consensus 77 g~~~a~~~~~~~l~~~~~~~v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~ 135 (362)
||+.+.+.+++.|+ .++.++...+...+++++.+....+......+...+++.+|+..
T Consensus 118 g~~~a~~~v~~~l~-~~a~~i~~~g~~al~~~~~~l~~~~~~~~d~~~G~~iv~~Al~~ 175 (252)
T d1ioka1 118 GIDVATAKVVEAIK-SAARGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEA 175 (252)
T ss_dssp HHHHHHHHHHHHHH-TTCBCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTH
T ss_pred hHHHHHHHHHHHHH-HhcCCCCCchHHhhHHHHHHHHhhhcccchHHHHHHHHHHHHHH
Confidence 99999999999999 99988876677788888877655554434445555777777653
No 10
>d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]}
Probab=99.55 E-value=1.7e-14 Score=129.14 Aligned_cols=97 Identities=23% Similarity=0.418 Sum_probs=91.3
Q ss_pred CccCCCCCeEEeccHHHHHhhccc----cChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHH
Q psy2832 1 MLMDPMGGIVMTNDGNAILREITV----QHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIK 76 (362)
Q Consensus 1 m~~~~~g~~~iTnDg~tIl~~l~~----~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~ 76 (362)
||.++.|.+.|||||.||++++++ +||.++++.+++.++++.+||||||.++|++++++++..++..|.||..+++
T Consensus 37 ~i~~~~g~~~itkdg~ti~~~i~l~d~~e~~~a~~~~~~~~~~~~~~gDgttt~~vl~~~~l~~~~~~i~~G~~~~~i~~ 116 (255)
T d1we3a1 37 VLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKR 116 (255)
T ss_dssp EECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEEcCCCCceEecchhhhhhhccccchhhhhHHHHHHHhhhhhHHHhhcchhHHHHHHHHHHHhhhhHHhcCCccchhhh
Confidence 456778999999999999999998 5888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCC
Q psy2832 77 AYRSALEDMVNILETKVSTPLD 98 (362)
Q Consensus 77 g~~~a~~~~~~~l~~~~~~~v~ 98 (362)
|++++.+.+++.|+ .++.++.
T Consensus 117 g~~~a~~~al~~l~-~~~~~~~ 137 (255)
T d1we3a1 117 GIEKAVEAAVEKIK-ALAIPVG 137 (255)
T ss_dssp HHHHHHHHHHHHHH-HTCBCCC
T ss_pred hhhhhhHHHHHHHH-HHhhhcc
Confidence 99999999999999 8887764
No 11
>d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=99.45 E-value=1e-14 Score=112.44 Aligned_cols=100 Identities=21% Similarity=0.317 Sum_probs=88.2
Q ss_pred CCcCCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccc
Q psy2832 97 LDKSDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKD 176 (362)
Q Consensus 97 v~~~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~ 176 (362)
|+..|++.|.++|+|+|.+|.+..+.+++++++++|+..+....+++..+|++ ++++.++.|+++.||++++|+++.+
T Consensus 1 vd~~D~e~L~~va~Tsl~~K~~~~~~d~la~l~v~Av~~v~~~~~~~~~~d~~-~Iki~K~~Ggsv~dS~lv~G~vl~k- 78 (107)
T d1q3qa3 1 VDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLD-NIKFEKKAGEGVEESELVKAVTILI- 78 (107)
T ss_dssp CCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGG-GEEEEEEEBSCGGGCEEESSEEEEE-
T ss_pred CCccHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhcccCCCcccchH-HEEEEEecCCChhhCEEEccEEEEc-
Confidence 45678999999999999999999999999999999999997655555556665 4999999999999999999999987
Q ss_pred cCCccCcccccCceEEEeeccccc
Q psy2832 177 VTHPKMRRRIENPRIVLLDCTLEY 200 (362)
Q Consensus 177 ~~~~~m~~~~~~~~i~l~~~~l~~ 200 (362)
++.||+.++|++|++++++++.
T Consensus 79 --~~~mp~~i~n~ki~lld~~le~ 100 (107)
T d1q3qa3 79 --RGGTEHVIDEVERALEDAVKVV 100 (107)
T ss_dssp --EESSHHHHHHHHHHHHHHHHHH
T ss_pred --cCCCCcccCCcCEeeccCcHHH
Confidence 4589999999999999999984
No 12
>d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=99.44 E-value=4.3e-14 Score=119.44 Aligned_cols=109 Identities=18% Similarity=0.234 Sum_probs=78.3
Q ss_pred ccChhhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHhhcCCCCCcCCHH
Q psy2832 24 VQHPAGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRSALEDMVNILETKVSTPLDKSDRS 103 (362)
Q Consensus 24 ~~hP~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~a~~~~~~~l~~~~~~~v~~~~~~ 103 (362)
++|+.|+|+++++.++++++||||||++||++++++++.+++..|+||..|.+||+.|++.+++.|+ +.+.++......
T Consensus 3 ~e~~ga~lv~~~a~~~~~~~GDGTTTatVLa~~i~~e~~~~i~~g~~p~~i~~Gi~~A~~~v~~~L~-~~a~~v~g~~~~ 81 (180)
T d1sjpa1 3 YEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLL-KGAKIVAGGGVT 81 (180)
T ss_dssp HHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH-HTCBEEETTTTT
T ss_pred chhHhHHHHHHHHHhhHHHcCCCchHHHHHHHHHHHHHHHHhhCCCChHHHHhhHHHHHHHHHHHHH-HHHhhhcchhhh
Confidence 5789999999999999999999999999999999999999999999999999999999999999999 988887543321
Q ss_pred HHHHHHHHHhhcccccchHHHHHHHHHHHHhh
Q psy2832 104 KLIEVIKACVGTKFIGKWSDLACNIALDAVQT 135 (362)
Q Consensus 104 ~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~ 135 (362)
+++ +...+.........+...+++.+|++.
T Consensus 82 -~l~-a~~al~~~~~~~~e~~g~~i~~~Al~~ 111 (180)
T d1sjpa1 82 -LLQ-AAPTLDELKLEGDEATGANIVKVALEA 111 (180)
T ss_dssp -TTT-TGGGGGGSCCCTHHHHHHHHHHHHTTH
T ss_pred -HHH-HHHHHhhhhhhhHHHHHHHHHHHHHHH
Confidence 222 222232222333445566666666654
No 13
>d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=99.44 E-value=1.6e-14 Score=110.84 Aligned_cols=96 Identities=20% Similarity=0.277 Sum_probs=77.2
Q ss_pred CCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceeeccccCC
Q psy2832 100 SDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVMLNKDVTH 179 (362)
Q Consensus 100 ~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~~~~~~~ 179 (362)
+|++.|.++|+|+|.+|....+.+++++++++|+..+....++...+|++ ++++.++.|+++.||++++|+++++ +
T Consensus 1 sD~e~L~~va~Tsl~~K~~~~~~d~ls~l~vdAv~~v~~~~~g~~~~d~~-~I~i~k~~Ggs~~dS~lv~G~vl~k---~ 76 (105)
T d1a6da3 1 TDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTA-NIKVDKKNGGSVNDTQFISAVSILI---R 76 (105)
T ss_dssp CCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGG-GEEEEECCCSCSTTCEEESCEEEEE---C
T ss_pred CcHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHhccccCCCceecHH-HhhhhhccCCChhheeeeeccceec---c
Confidence 37899999999999999999999999999999999997655555567776 4999999999999999999999976 3
Q ss_pred ccCcccccCceEEEeecccc
Q psy2832 180 PKMRRRIENPRIVLLDCTLE 199 (362)
Q Consensus 180 ~~m~~~~~~~~i~l~~~~l~ 199 (362)
+.||+.+++++|++++.+++
T Consensus 77 ~~mp~~~~~~kialld~~~~ 96 (105)
T d1a6da3 77 GGTDHVVSEVERALNDAIRV 96 (105)
T ss_dssp CSSSTTHHHHHHHHHHHHHH
T ss_pred CCCCcccCCcCeeEecchhh
Confidence 45665555555555544444
No 14
>d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=99.40 E-value=1.2e-14 Score=112.06 Aligned_cols=98 Identities=20% Similarity=0.360 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcccceeEeceee-----c
Q psy2832 100 SDRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIEDSCVLRGVML-----N 174 (362)
Q Consensus 100 ~~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~dS~lv~Giv~-----~ 174 (362)
+|++.|.++|+|+|++|....+.+++++++++|+..+....+++..+|++ ++++.++.|++++||++++|+++ +
T Consensus 3 ~D~e~L~~va~Tsl~~K~~~~~~d~la~l~v~Av~~v~~~~~~~~~~d~~-~IkI~k~~Ggs~~dS~li~G~v~~~~~~~ 81 (107)
T d1a6db3 3 DEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFD-NIQVVKKQGGAIDDTQLINKAVSILVRGE 81 (107)
T ss_dssp THHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGG-GEEEEEEESSCGGGCEEESSCEEEEEEES
T ss_pred chHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHhhcccCCCcccCHH-HeEEEeecCCChhhcEEEeccceeeccCC
Confidence 46889999999999999999999999999999999997655555566665 58999999999999999999877 4
Q ss_pred cccCCccCcccccCceEEEeecccc
Q psy2832 175 KDVTHPKMRRRIENPRIVLLDCTLE 199 (362)
Q Consensus 175 ~~~~~~~m~~~~~~~~i~l~~~~l~ 199 (362)
+...+++||+.++|+ |+++++++|
T Consensus 82 k~~~~~~Mpk~i~n~-I~lld~~LE 105 (107)
T d1a6db3 82 TEHVVDEMERSITDS-LHVVASALE 105 (107)
T ss_dssp SHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred ceeccCCCCccccCc-EEEEecCCc
Confidence 555557899999887 999999887
No 15
>d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=98.37 E-value=2.8e-09 Score=81.37 Aligned_cols=54 Identities=20% Similarity=0.144 Sum_probs=47.5
Q ss_pred eEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeecccccccc
Q psy2832 190 RIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKK 246 (362)
Q Consensus 190 ~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k 246 (362)
.+.+.++.+.+.+||++.||++++|+++++ |++||+.++|+||+++||+++.+.
T Consensus 49 ~~d~~~Iki~K~~Ggsv~dS~lv~G~vl~k---~~~mp~~i~n~ki~lld~~le~~~ 102 (107)
T d1q3qa3 49 VVDLDNIKFEKKAGEGVEESELVKAVTILI---RGGTEHVIDEVERALEDAVKVVKD 102 (107)
T ss_dssp ECCGGGEEEEEEEBSCGGGCEEESSEEEEE---EESSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHEEEEEecCCChhhCEEEccEEEEc---cCCCCcccCCcCEeeccCcHHHHh
Confidence 355567899999999999999999999987 789999999999999999665543
No 16
>d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=98.26 E-value=9.9e-09 Score=78.19 Aligned_cols=53 Identities=15% Similarity=0.251 Sum_probs=46.2
Q ss_pred eEEEeecccccccCCCccceeeeccccc-----ccccccchhhccccCcceeeeccccc
Q psy2832 190 RIVLLDCTLEYKKGESQTNVEIVNESDW-----RRSVTHPKMRRRIENPRIVLLDCTLE 243 (362)
Q Consensus 190 ~i~l~~~~l~~~~g~s~~~s~l~~G~~~-----~~~~~~~~~~~~i~~~ki~~~~~~~~ 243 (362)
.+++.++.+++.+||+++||++++|+++ ++...|++||++++|+ |+++||++|
T Consensus 48 ~~d~~~IkI~k~~Ggs~~dS~li~G~v~~~~~~~k~~~~~~Mpk~i~n~-I~lld~~LE 105 (107)
T d1a6db3 48 YVDFDNIQVVKKQGGAIDDTQLINKAVSILVRGETEHVVDEMERSITDS-LHVVASALE 105 (107)
T ss_dssp EECGGGEEEEEEESSCGGGCEEESSCEEEEEEESSHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred ccCHHHeEEEeecCCChhhcEEEeccceeeccCCceeccCCCCccccCc-EEEEecCCc
Confidence 4666688999999999999999999887 6777779999999998 999999654
No 17
>d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=98.05 E-value=7.3e-08 Score=72.95 Aligned_cols=57 Identities=9% Similarity=0.039 Sum_probs=50.4
Q ss_pred eEEEeecccccccCCCccceeeecccccccccccchhhccccCcceeeeccccccccccc
Q psy2832 190 RIVLLDCTLEYKKGESQTNVEIVNESDWRRSVTHPKMRRRIENPRIVLLDCTLEYKKGES 249 (362)
Q Consensus 190 ~i~l~~~~l~~~~g~s~~~s~l~~G~~~~~~~~~~~~~~~i~~~ki~~~~~~~~~~k~~~ 249 (362)
.+++.++.+.+.+||+++||++++|+++++ |++||+.++++||+++|+.++..+++.
T Consensus 46 ~~d~~~I~i~k~~Ggs~~dS~lv~G~vl~k---~~~mp~~~~~~kialld~~~~~~~te~ 102 (105)
T d1a6da3 46 IVDTANIKVDKKNGGSVNDTQFISAVSILI---RGGTDHVVSEVERALNDAIRVVAITKE 102 (105)
T ss_dssp ECCGGGEEEEECCCSCSTTCEEESCEEEEE---CCSSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eecHHHhhhhhccCCChhheeeeeccceec---cCCCCcccCCcCeeEecchhhcccccc
Confidence 466778899999999999999999999977 789999999999999999777666554
No 18
>d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=97.19 E-value=0.001 Score=54.61 Aligned_cols=75 Identities=16% Similarity=0.177 Sum_probs=54.4
Q ss_pred HHHHHhCCCcEEEeCCCCCHHHHHHHHh---CC---CeEEeeCC-----hhhHHHHHHHhCCeEcc-----CCCCCCCCC
Q psy2832 284 CNDIIALKPDLIFTEKGISDLAQHFLLK---AN---ITAIRRVR-----KSDNNRIARACGATIVN-----RTEELREED 347 (362)
Q Consensus 284 ~~~i~~~~v~~I~~~~gi~~~~~~~l~~---~~---I~~i~~v~-----~~~l~~la~~tG~~iv~-----~~~~~~~~~ 347 (362)
.+...+.+--+++....++..|+..|.. +| +.+++... .+.++-||-.||+.+++ +++..+.+.
T Consensus 46 Le~~~~~~rPLlIIA~di~~~aL~~Lv~N~~~g~l~v~aVkaPgfG~~r~~~L~DlA~~TGa~vi~~~~g~~l~~~~~~~ 125 (184)
T d1sjpa2 46 LEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSL 125 (184)
T ss_dssp HHHHHTTTCCEEEEESCBCHHHHHHHHHHHHTTSSCCEEEECSSCHHHHHHHHHHHHHHHTCCEEBTTTTBCSSSCCTTT
T ss_pred HHHhhccCCcEEEEcchhhHHHHHHHHHHHhcCchheecccCCCCCcchHHHHHHHHHHhCCEEecccccccccccchhh
Confidence 3444544444666567899988887763 33 56666654 67799999999999997 466778889
Q ss_pred CCCCcceEEEEe
Q psy2832 348 VGTGAGLFEIKK 359 (362)
Q Consensus 348 lG~~~~~~~~~~ 359 (362)
+|+ |..+.+.+
T Consensus 126 LG~-~~kv~itk 136 (184)
T d1sjpa2 126 LGK-ARKVVVTK 136 (184)
T ss_dssp SEE-EEEEEECS
T ss_pred CCe-eeEEEEec
Confidence 999 78887643
No 19
>d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]}
Probab=97.14 E-value=0.00048 Score=57.03 Aligned_cols=68 Identities=29% Similarity=0.348 Sum_probs=49.5
Q ss_pred CCCcEEEeCCCCCHHHHHHHHh---CC---CeEEeeC-----ChhhHHHHHHHhCCeEccC-----CCCCCCCCCCCCcc
Q psy2832 290 LKPDLIFTEKGISDLAQHFLLK---AN---ITAIRRV-----RKSDNNRIARACGATIVNR-----TEELREEDVGTGAG 353 (362)
Q Consensus 290 ~~v~~I~~~~gi~~~~~~~l~~---~~---I~~i~~v-----~~~~l~~la~~tG~~iv~~-----~~~~~~~~lG~~~~ 353 (362)
.++=+|+ ...++..|+..|.. +| +.+++.. +++.++-||-+||+.+++. +...+.+.+|+ |.
T Consensus 61 ~~pLlII-A~di~~~aL~~Lv~N~~kg~l~v~aVkaPgfG~~r~~~LeDlA~~TGa~vi~~~~g~~l~~~~~~~LG~-~~ 138 (193)
T d1kida_ 61 GKPLLII-AEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ-AK 138 (193)
T ss_dssp TCCEEEE-ESEECHHHHHHHHHHHHTTSCCEEEEECCSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EE
T ss_pred CCcEEEE-eccccHHHHHHHHHhhhccCcceeeccCCCcChhHHHHHHHHHHHcCCEEechhcccccccCCHhHcCc-cc
Confidence 4554454 57899988887763 33 4555553 3577999999999999985 56677889999 78
Q ss_pred eEEEEe
Q psy2832 354 LFEIKK 359 (362)
Q Consensus 354 ~~~~~~ 359 (362)
.+.+.+
T Consensus 139 kv~itk 144 (193)
T d1kida_ 139 RVVINK 144 (193)
T ss_dssp EEEECS
T ss_pred EEEEec
Confidence 887654
No 20
>d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]}
Probab=97.02 E-value=0.0015 Score=51.29 Aligned_cols=74 Identities=23% Similarity=0.279 Sum_probs=52.7
Q ss_pred HHHHHhC-CCcEEEeCCCCCHHHHHHHHh---C---CCeEEeeCC-----hhhHHHHHHHhCCeEccC-----CCCCCCC
Q psy2832 284 CNDIIAL-KPDLIFTEKGISDLAQHFLLK---A---NITAIRRVR-----KSDNNRIARACGATIVNR-----TEELREE 346 (362)
Q Consensus 284 ~~~i~~~-~v~~I~~~~gi~~~~~~~l~~---~---~I~~i~~v~-----~~~l~~la~~tG~~iv~~-----~~~~~~~ 346 (362)
.+...+. ++=+|+ ..+++..|+..|.. + .+.+++... ++.++-||-.||+.+++. ++..+.+
T Consensus 46 Le~~~~~~rPLlII-A~di~~eaL~~Lv~N~~~g~l~v~aVkaP~fG~~r~~~L~DlAi~tGa~v~~~~~g~~l~~~~~~ 124 (145)
T d1srva_ 46 LEQVAQTGKPLLII-AEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLS 124 (145)
T ss_dssp HHHHHTTTCCEEEE-ESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGG
T ss_pred HHHHHHhCCcEEEE-eCccCHHHHHHHHHHHhcCceEEEEEeCCCccHHHHHHHhhhhhhhCCEeeccccCcccccCCHH
Confidence 3444444 454555 57899989887763 3 356666654 688999999999999965 4556678
Q ss_pred CCCCCcceEEEEe
Q psy2832 347 DVGTGAGLFEIKK 359 (362)
Q Consensus 347 ~lG~~~~~~~~~~ 359 (362)
.+|+ |..+.+.+
T Consensus 125 ~LGs-a~kv~vtk 136 (145)
T d1srva_ 125 MLGR-AERVRITK 136 (145)
T ss_dssp GCEE-EEEEEECS
T ss_pred HCCc-ccEEEEeC
Confidence 9999 78887654
No 21
>d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]}
Probab=96.74 E-value=0.00064 Score=55.42 Aligned_cols=68 Identities=25% Similarity=0.299 Sum_probs=34.6
Q ss_pred CCCcEEEeCCCCCHHHHHHHHhC------CCeEEeeCC-----hhhHHHHHHHhCCeEccC-----CCCCCCCCCCCCcc
Q psy2832 290 LKPDLIFTEKGISDLAQHFLLKA------NITAIRRVR-----KSDNNRIARACGATIVNR-----TEELREEDVGTGAG 353 (362)
Q Consensus 290 ~~v~~I~~~~gi~~~~~~~l~~~------~I~~i~~v~-----~~~l~~la~~tG~~iv~~-----~~~~~~~~lG~~~~ 353 (362)
.++=+|++ ..++..|+..|..+ .+.+++... .+.|+-||-.||+.+++. ++..+.+.+|+ |.
T Consensus 54 ~~PLlIIA-~di~~~aL~~Lv~N~~~g~l~v~aVkaP~fG~~r~~~LeDlA~~tGa~vi~~~~g~~l~~~~~~~LG~-a~ 131 (176)
T d1ioka2 54 QKPLLIVA-EDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR-AK 131 (176)
T ss_dssp CCCCEEEE-SCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEE-EE
T ss_pred CCcEEEEe-cCCCHHHHHHHHHHHhcCCceEEEEeCCCCCcHHHHHHHHHHHhhCCEEEecccCCChhhCCHHHCce-ee
Confidence 45555654 67888888877654 245555443 567999999999999975 56677889999 78
Q ss_pred eEEEEe
Q psy2832 354 LFEIKK 359 (362)
Q Consensus 354 ~~~~~~ 359 (362)
.+.+.+
T Consensus 132 kv~vtk 137 (176)
T d1ioka2 132 KVSINK 137 (176)
T ss_dssp EEEECS
T ss_pred EEEEec
Confidence 887654
No 22
>d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]}
Probab=96.69 E-value=0.00049 Score=55.78 Aligned_cols=42 Identities=86% Similarity=1.352 Sum_probs=36.2
Q ss_pred cceeEeceeeccccCCccCcccccCceEEEeecccccccCCC
Q psy2832 164 DSCVLRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGES 205 (362)
Q Consensus 164 dS~lv~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s 205 (362)
||++++|+++++.+.++.|++.+++|+|+++++++++.....
T Consensus 1 DS~li~Gvvi~k~~~~~~m~~~i~~~kIlll~~~le~~~~~~ 42 (168)
T d1gmla_ 1 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 42 (168)
T ss_dssp CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC----
T ss_pred CcEEEEEEEEecccCCcCCccccCCceEEEEecccccccccc
Confidence 689999999999999999999999999999999999775443
No 23
>d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]}
Probab=94.80 E-value=0.0061 Score=48.17 Aligned_cols=35 Identities=37% Similarity=0.710 Sum_probs=32.2
Q ss_pred EeceeeccccCCccCcccccCceEEEeeccccccc
Q psy2832 168 LRGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKK 202 (362)
Q Consensus 168 v~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~ 202 (362)
++|+++++.+.|+.||+.++||+|+++++++++..
T Consensus 1 i~Gvv~~k~~~~~~mp~~i~~~kI~ll~~~Le~~k 35 (152)
T d1assa_ 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKK 35 (152)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCH
T ss_pred CeEEEEeCccCCCCCCccccCceEEEEeccccccc
Confidence 47999999999999999999999999999999753
No 24
>d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]}
Probab=94.54 E-value=0.016 Score=45.62 Aligned_cols=37 Identities=49% Similarity=0.890 Sum_probs=33.1
Q ss_pred eceeeccccCCccCcccccCceEEEeecccccccCCC
Q psy2832 169 RGVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGES 205 (362)
Q Consensus 169 ~Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~s 205 (362)
.|+++++.+.|++||+.++||+|+++++++++.....
T Consensus 1 kGvv~~k~~~~~~mp~~i~n~kIlll~~~Le~~k~~~ 37 (153)
T d1q3qa2 1 RGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTET 37 (153)
T ss_dssp SSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSS
T ss_pred CeEEEeCCCCCccCCcccCCccEEEEecccccccccc
Confidence 4999999999999999999999999999999766543
No 25
>d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]}
Probab=94.11 E-value=0.013 Score=46.13 Aligned_cols=35 Identities=40% Similarity=0.726 Sum_probs=32.0
Q ss_pred ceeeccccCCccCcccccCceEEEeecccccccCC
Q psy2832 170 GVMLNKDVTHPKMRRRIENPRIVLLDCTLEYKKGE 204 (362)
Q Consensus 170 Giv~~~~~~~~~m~~~~~~~~i~l~~~~l~~~~g~ 204 (362)
|+++++++.|++||+.+++|+|++++++|++....
T Consensus 1 Gvv~~k~~~~~~mpk~i~~~kIlll~~~Le~~k~~ 35 (152)
T d1a6db2 1 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPE 35 (152)
T ss_dssp EEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCS
T ss_pred CEEEeccCCCCCCCCcccCCcEEEEeccccccccc
Confidence 89999999999999999999999999999976544
No 26
>d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=80.84 E-value=2 Score=31.41 Aligned_cols=62 Identities=18% Similarity=0.131 Sum_probs=43.9
Q ss_pred HHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHhCCeEccCCCCCCCCCCCCC
Q psy2832 285 NDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARACGATIVNRTEELREEDVGTG 351 (362)
Q Consensus 285 ~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~~ 351 (362)
+.+...+|++|++ +++.+-+...|.++||.++.......-+-|.+.... .+..+++..-|.+
T Consensus 59 ~~l~~~~vd~vi~-~~iG~~~~~~L~~~GI~v~~~~~~~v~eal~~~~~g----~L~~~~~p~~~~g 120 (124)
T d1eo1a_ 59 QIIANNGVKAVIA-SSPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEG----NLEEIRSPGSGRG 120 (124)
T ss_dssp HHHHHTTCCEEEE-CCSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTT----CSCEECCCSCCSC
T ss_pred HHHHHCCCCEEEE-CCCCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhC----CCCcCCCCCCCCC
Confidence 3344569999998 579999999999999999987666556666665332 3444555555553
No 27
>d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]}
Probab=80.23 E-value=2.1 Score=29.61 Aligned_cols=64 Identities=11% Similarity=0.108 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcc-cceeEeceeeccccCC
Q psy2832 101 DRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIE-DSCVLRGVMLNKDVTH 179 (362)
Q Consensus 101 ~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~-dS~lv~Giv~~~~~~~ 179 (362)
+++.+.++|..+- +...+.+++.+|+.++..+ | .+.+.. |.+.. ..++++|+.+++++.+
T Consensus 4 ~~e~i~~VAtISa-------~D~~iG~lIa~A~~kVG~d--G--------vItvEe--~~~~~t~le~veG~~~d~Gy~S 64 (89)
T d1sjpa3 4 TKEQIAATAAISA-------GDQSIGDLIAEAMDKVGNE--G--------VITVEE--SNTFGLQLELTEVAVIKAGAAT 64 (89)
T ss_dssp SHHHHHHHHHHHT-------TCHHHHHHHHHHHHHSCTT--S--------CEEEEE--ESSSSEEEEEESEEEEEEECSS
T ss_pred CHHHHHHhhheec-------CCHHHHHHHHHHHHhcCCC--C--------ceEEEe--ccccceEEEEEEEEEecCCccC
Confidence 5677888887553 3466889999999988643 1 133433 23333 2589999999999988
Q ss_pred ccCc
Q psy2832 180 PKMR 183 (362)
Q Consensus 180 ~~m~ 183 (362)
|.|.
T Consensus 65 p~fv 68 (89)
T d1sjpa3 65 EVEL 68 (89)
T ss_dssp HHHH
T ss_pred ceEE
Confidence 7665
No 28
>d1o13a_ c.55.5.1 (A:) Hypothetical protein TM1816 {Thermotoga maritima [TaxId: 2336]}
Probab=67.64 E-value=8.7 Score=26.73 Aligned_cols=44 Identities=11% Similarity=0.186 Sum_probs=33.9
Q ss_pred HHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHH
Q psy2832 287 IIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARA 331 (362)
Q Consensus 287 i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~ 331 (362)
+...+|++|++ +++.+-+...|.++||.++.......-+.|.+.
T Consensus 60 l~~~gv~~vi~-~~iG~~a~~~L~~~GI~v~~~~~g~v~eal~~~ 103 (107)
T d1o13a_ 60 VKEKGAELVIV-RGIGRRAIAAFEAMGVKVIKGASGTVEEVVNQY 103 (107)
T ss_dssp HHHTTCSEEEC-SCCCHHHHHHHHHTTCEEECSCCSBHHHHHHHH
T ss_pred HHHCCCCEEEE-CCCCHHHHHHHHHCCCEEEEcCCCCHHHHHHHH
Confidence 45579999998 589999999999999999866555444444443
No 29
>d1rdua_ c.55.5.1 (A:) Hypothetical protein TM1290 {Thermotoga maritima [TaxId: 2336]}
Probab=59.61 E-value=5.6 Score=28.39 Aligned_cols=46 Identities=11% Similarity=0.098 Sum_probs=36.0
Q ss_pred HHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCChhhHHHHHHHh
Q psy2832 286 DIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRKSDNNRIARAC 332 (362)
Q Consensus 286 ~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~~~l~~la~~t 332 (362)
.+...+|++|+| +++.+-+...|.++||.++.-.....-+-|....
T Consensus 57 ~l~~~~v~~vi~-~~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~ 102 (116)
T d1rdua_ 57 SLVSKGVEYLIA-SNVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFS 102 (116)
T ss_dssp HHHTTTCCEEEC-SSCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHH
T ss_pred HHHHcCCCEEEE-CCcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHH
Confidence 345579999998 5799999999999999999766655556665553
No 30
>d1kp8a3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Escherichia coli [TaxId: 562]}
Probab=59.22 E-value=3.6 Score=28.85 Aligned_cols=63 Identities=19% Similarity=0.168 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCccc-ceeEeceeeccccCC
Q psy2832 101 DRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIED-SCVLRGVMLNKDVTH 179 (362)
Q Consensus 101 ~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~d-S~lv~Giv~~~~~~~ 179 (362)
+.+.+.++|.-+-+ +...+.++..+|+.++..+ | .+.+.. |.+..+ -++++|+.+++++.+
T Consensus 4 ~~~~i~~VAtISan------~D~~iG~lIa~a~~~vg~d--G--------vitvee--~~~~~~~~~ivEG~~~d~G~vS 65 (97)
T d1kp8a3 4 DSKAIAQVGTISAN------SDETVGKLIAEAMDKVGKE--G--------VITVED--GTGLQDELDVVERVAKLAGGVA 65 (97)
T ss_dssp SHHHHHHHHHHHTT------SCHHHHHHHHHHHHHHCTT--S--------EEEEEC--CSSSSCEEEEEHHHHHHHHCEE
T ss_pred CHHHHhhheeEecC------CcHHHHHHHHHHHHHhccc--c--------eEEEec--cccchhHHHHHHHHHhhcCCcc
Confidence 67889999987753 3577899999999998643 2 144443 344332 579999999887765
Q ss_pred cc
Q psy2832 180 PK 181 (362)
Q Consensus 180 ~~ 181 (362)
+.
T Consensus 66 ~~ 67 (97)
T d1kp8a3 66 VI 67 (97)
T ss_dssp EE
T ss_pred ce
Confidence 43
No 31
>d1p90a_ c.55.5.2 (A:) NafY core domain {Azotobacter vinelandii [TaxId: 354]}
Probab=45.59 E-value=29 Score=24.59 Aligned_cols=44 Identities=9% Similarity=0.193 Sum_probs=33.1
Q ss_pred HhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCC----hhhHHHHHHHh
Q psy2832 288 IALKPDLIFTEKGISDLAQHFLLKANITAIRRVR----KSDNNRIARAC 332 (362)
Q Consensus 288 ~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~----~~~l~~la~~t 332 (362)
...+|++|+| .++.+-+...|.+.||.++.-.. .+.+++|....
T Consensus 64 ~~~~~~vvi~-~~iG~~a~~~L~~~GI~vi~~~~~~~ie~al~~l~~~l 111 (123)
T d1p90a_ 64 QIQDCQVLYV-VSIGGPAAAKVVRAGIHPLKKPKGCAAQEAIAELQTVM 111 (123)
T ss_dssp HTTTCSEEEE-SBCCHHHHHHHHHTTCEEEECTTCEEHHHHHHHHHHHH
T ss_pred hhCCCcEEEE-CCCChhHHHHHHHCCcEEEEeCCCCcHHHHHHHHHHHh
Confidence 3468999998 68999999999999999886543 33455555543
No 32
>d1ioka3 d.56.1.1 (A:137-190,A:367-409) GroEL, I domain {Paracoccus denitrificans [TaxId: 266]}
Probab=43.56 E-value=4.5 Score=28.32 Aligned_cols=62 Identities=21% Similarity=0.135 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCccc-ceeEeceeeccccCC
Q psy2832 101 DRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIED-SCVLRGVMLNKDVTH 179 (362)
Q Consensus 101 ~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~d-S~lv~Giv~~~~~~~ 179 (362)
+.+.+.++|.-+- ++...+.+++.+|+.++..+ | .+.+.. |.++.. -++++|+.+++++.+
T Consensus 4 ~~~~i~~VAtISa------n~d~~IG~lIa~a~~~Vg~~--G--------vitvEe--~~~~~t~~~ivEG~~~~~GyiS 65 (97)
T d1ioka3 4 DSSEVAQVGTISA------NGESFIGQQIAEAMQRVGNE--G--------VITVEE--NKGMETEVEVVERVAKLAGGVA 65 (97)
T ss_dssp STTTTTHHHHHTT------TTCHHHHHHHHHHHHHHCTT--S--------CCCCEE--CSSSCCEEEEEHHHHTTSSCEE
T ss_pred CHHHhheeeeeec------CCchHHHHHHHHHHHHhCCC--c--------eEEecc--ccchhhhhhHhhhhhhhhcccc
Confidence 4556777876543 34467899999999998643 2 133333 333432 479999999887655
Q ss_pred c
Q psy2832 180 P 180 (362)
Q Consensus 180 ~ 180 (362)
+
T Consensus 66 ~ 66 (97)
T d1ioka3 66 V 66 (97)
T ss_dssp E
T ss_pred c
Confidence 4
No 33
>d1l0ba2 c.15.1.3 (A:1705-1801) Breast cancer associated protein, BRCA1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.92 E-value=19 Score=24.77 Aligned_cols=32 Identities=25% Similarity=0.528 Sum_probs=26.7
Q ss_pred eeCChhhHHHHHHHhCCeEccCCCCCCCCCCCC
Q psy2832 318 RRVRKSDNNRIARACGATIVNRTEELREEDVGT 350 (362)
Q Consensus 318 ~~v~~~~l~~la~~tG~~iv~~~~~~~~~~lG~ 350 (362)
..++..+++.+...|||++++++..++.+. |+
T Consensus 14 t~mt~d~Le~mv~lCGAsVvk~~~~l~~~~-~~ 45 (97)
T d1l0ba2 14 TNMPKDELERMLQLCGASVVKELPLLTRDT-GA 45 (97)
T ss_dssp SSSCHHHHHHHHHHTTCEEECSSSCGGGCC-SS
T ss_pred cCCCHHHHHHHHHHcCceeecChhhcCCCC-CC
Confidence 456788999999999999999998877555 54
No 34
>d1we3a3 d.56.1.1 (A:139-189,A:374-408) GroEL, I domain {Thermus thermophilus [TaxId: 274]}
Probab=31.23 E-value=68 Score=21.32 Aligned_cols=58 Identities=21% Similarity=0.266 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHhhcccccchHHHHHHHHHHHHhhhccccCCccccccccceeEEEcCCCCcc-cceeEeceeecccc
Q psy2832 101 DRSKLIEVIKACVGTKFIGKWSDLACNIALDAVQTVTVEESGRKEIDIKRYAKVEKIPGGTIE-DSCVLRGVMLNKDV 177 (362)
Q Consensus 101 ~~~~ll~ia~t~l~~k~i~~~~~~~~~l~~~ai~~i~~~~~~~~~~d~~~~i~i~ki~g~s~~-dS~lv~Giv~~~~~ 177 (362)
|++.+.++|..+-+ .+.+.+++.+|+.++..+ | .+.+.. |.+.. ...+++|+-+..++
T Consensus 2 d~~~i~~VAtISAn-------D~~iG~lIAeA~~kVG~d--G--------vItVEe--s~t~~t~levveG~~~~~s~ 60 (86)
T d1we3a3 2 DRKAIEEVATISAN-------DPEVGKLIADAMEKVGKE--G--------IITVEE--SKSLETELKFVGVAVIRVGA 60 (86)
T ss_dssp SHHHHHHHHHHHHT-------CHHHHHHHHHHHHTTCTT--S--------EEEEEE--CSSSSCEEEEECEEEEEECC
T ss_pred CHHHHhhheeeecC-------CHHHHHHHHHHHHHcCCC--c--------eEEEEe--cCCCCeEEEEEEeeecccce
Confidence 57788888876543 457899999999998643 2 144443 44443 25788888776543
No 35
>d2phza1 c.92.2.4 (A:20-296) Iron-uptake system-binding protein FeuA {Bacillus subtilis [TaxId: 1423]}
Probab=24.09 E-value=80 Score=24.95 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=36.9
Q ss_pred HHHHHhCCCcEEEeCCCCCHHHHHHHHhCCCeEEeeCCh----hhHHHHHHHhCC
Q psy2832 284 CNDIIALKPDLIFTEKGISDLAQHFLLKANITAIRRVRK----SDNNRIARACGA 334 (362)
Q Consensus 284 ~~~i~~~~v~~I~~~~gi~~~~~~~l~~~~I~~i~~v~~----~~l~~la~~tG~ 334 (362)
.++|...+||+|+...+.++.....+.+.++.+.-.-.. +.++.+++.+|.
T Consensus 70 ~E~i~~l~PDlIi~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~~i~~lg~~~g~ 124 (277)
T d2phza1 70 IEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGK 124 (277)
T ss_dssp HHHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCEEEecCCCCHHHHHHHHhcCceEeecCcHHHHHHHHHHHHHHhcc
Confidence 367788899999998888877778888888876643333 346666776653
No 36
>d1vhba_ a.1.1.2 (A:) Bacterial dimeric hemoglobin {Vitreoscilla stercoraria [TaxId: 61]}
Probab=22.28 E-value=1.3e+02 Score=21.39 Aligned_cols=58 Identities=17% Similarity=0.229 Sum_probs=28.7
Q ss_pred hhHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHH
Q psy2832 28 AGKSMIEIARTQDEEVGDGTTSVIVLAGEMLNVAEKFLSDQMHPTVIIKAYRSALEDMVN 87 (362)
Q Consensus 28 ~akll~~~~~~~~~~~GDGttt~viL~~~ll~~~~~li~~gi~p~~ii~g~~~a~~~~~~ 87 (362)
...++.++++.|. ..|=..-.+-.+...|+....+.+..+.+| ...+.+.++...+.+
T Consensus 73 l~~~L~~Lg~~H~-~~gv~~~~f~~~~~~ll~~l~~~lg~~~t~-e~~~AW~~~~~~I~~ 130 (144)
T d1vhba_ 73 ILPAVKKIAVKHC-QAGVAAAHYPIVGQELLGAIKEVLGDAATD-DILDAWGKAYGVIAD 130 (144)
T ss_dssp GHHHHHHHHHHHH-HHTCCGGGHHHHHHHHHHHHHHHHGGGCCH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc-cccCCHHHHHHHHHHHHHHHHHHhCccCCH-HHHHHHHHHHHHHHH
Confidence 3555555555553 344445555555555555555555444554 334444444444433
No 37
>d1v66a_ a.140.2.1 (A:) p53 binding domain of protein inhibitor of activated STAT protein 1, PIAS-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.03 E-value=64 Score=20.15 Aligned_cols=25 Identities=32% Similarity=0.436 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhCCCChH---HHHHHHH
Q psy2832 55 GEMLNVAEKFLSDQMHPT---VIIKAYR 79 (362)
Q Consensus 55 ~~ll~~~~~li~~gi~p~---~ii~g~~ 79 (362)
.+|..+|..|+..+-+|. .|.+-|+
T Consensus 35 ~eL~~RaL~LL~~~~~~~v~~kIrelY~ 62 (65)
T d1v66a_ 35 HELLTKALHLLKAGCSPAVQMKIKELYR 62 (65)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 489999999999999983 4555444
Done!