BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2833
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48605|TCPG_DROME T-complex protein 1 subunit gamma OS=Drosophila melanogaster
GN=Cctgamma PE=2 SV=2
Length = 544
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 64/73 (87%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF ++TEC+ PKACTILLRGASKD+LNETERNLQDALHVARN++LEP+LV GGGAV
Sbjct: 357 IGDEYFTFVTECKEPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAV 416
Query: 115 EMAVSHVSASKDL 127
EMA S + K +
Sbjct: 417 EMAASQLLTRKQV 429
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Query: 1 MFGPGSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
MFG G P+LVLS NTKR+SGRKVQLENIQAGK I I T
Sbjct: 1 MFG-GQQPILVLSQNTKRESGRKVQLENIQAGKAIADVIRT 40
>sp|Q3T0K2|TCPG_BOVIN T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=1 SV=1
Length = 545
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 62/71 (87%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF +ITEC++PKACTILLRGASK++L+E ERNLQDA+ V RN++L+P+LVPGGGA
Sbjct: 355 IGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGAS 414
Query: 115 EMAVSHVSASK 125
EMAV+H K
Sbjct: 415 EMAVAHALTEK 425
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 25/37 (67%)
Query: 5 GSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
G PVLVLS NTKR+SGRKVQ NI A K I I T
Sbjct: 3 GHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRT 39
>sp|Q4R963|TCPG_MACFA T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3
PE=2 SV=1
Length = 545
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 62/71 (87%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF +ITEC++PKACTILLRGASK++L+E ERNLQDA+ V RN++L+P+LVPGGGA
Sbjct: 355 IGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGAS 414
Query: 115 EMAVSHVSASK 125
EMAV+H K
Sbjct: 415 EMAVAHALTEK 425
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 25/37 (67%)
Query: 5 GSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
G PVLVLS NTKR+SGRKVQ NI A K I I T
Sbjct: 3 GHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRT 39
>sp|Q6P502|TCPG_RAT T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1
SV=1
Length = 545
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 62/71 (87%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF +IT+C++PKACTILLRGASK++L+E ERNLQDA+ V RN++L+P+LVPGGGA
Sbjct: 355 IGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGAS 414
Query: 115 EMAVSHVSASK 125
EMAV+H K
Sbjct: 415 EMAVAHALTEK 425
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 25/37 (67%)
Query: 5 GSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
G PVLVLS NTKR+SGRKVQ NI A K I I T
Sbjct: 3 GHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRT 39
>sp|P80318|TCPG_MOUSE T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1
Length = 545
Score = 113 bits (283), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 62/71 (87%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF +IT+C++PKACTILLRGASK++L+E ERNLQDA+ V RN++L+P+LVPGGGA
Sbjct: 355 IGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGAS 414
Query: 115 EMAVSHVSASK 125
EMAV+H K
Sbjct: 415 EMAVAHALTEK 425
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 25/37 (67%)
Query: 5 GSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
G PVLVLS NTKR+SGRKVQ NI A K I I T
Sbjct: 3 GHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRT 39
>sp|P49368|TCPG_HUMAN T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4
Length = 545
Score = 113 bits (283), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 62/71 (87%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF +IT+C++PKACTILLRGASK++L+E ERNLQDA+ V RN++L+P+LVPGGGA
Sbjct: 355 IGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGAS 414
Query: 115 EMAVSHVSASK 125
EMAV+H K
Sbjct: 415 EMAVAHALTEK 425
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 25/37 (67%)
Query: 5 GSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
G PVLVLS NTKR+SGRKVQ NI A K I I T
Sbjct: 3 GHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRT 39
>sp|Q5NVF9|TCPG_PONAB T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1
Length = 545
Score = 113 bits (283), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 62/71 (87%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF +IT+C++PKACTILLRGASK++L+E ERNLQDA+ V RN++L+P+LVPGGGA
Sbjct: 355 IGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGAS 414
Query: 115 EMAVSHVSASK 125
EMAV+H K
Sbjct: 415 EMAVAHALTEK 425
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 25/37 (67%)
Query: 5 GSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
G PVLVLS NTKR+SGRKVQ NI A K I I T
Sbjct: 3 GHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRT 39
>sp|Q54TH8|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum
GN=cct3 PE=1 SV=1
Length = 530
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 62/71 (87%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF ++ +C+ PKACTILLRGASKD+LNE ERNL DAL+VARNI+L+P+LVPGGGA+
Sbjct: 354 IGDEYFTFLEDCKEPKACTILLRGASKDILNEVERNLTDALNVARNIVLDPRLVPGGGAI 413
Query: 115 EMAVSHVSASK 125
EMA+S + K
Sbjct: 414 EMALSQALSEK 424
>sp|O00782|TCPG_OXYGR T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3
SV=1
Length = 559
Score = 110 bits (274), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 59/65 (90%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF ++T+C+NPKAC+ILLRGASKD+LNE ERNL DAL VARN+M+ PKLVPGGGA+
Sbjct: 357 IGDEYFSFMTKCENPKACSILLRGASKDVLNEIERNLHDALGVARNVMVNPKLVPGGGAI 416
Query: 115 EMAVS 119
EM ++
Sbjct: 417 EMELA 421
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 7 APVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
A V +L+ N KR+ GRK Q NI+A + + + T
Sbjct: 5 AAVFILNQNAKREQGRKAQTANIKAARAVSDIVRT 39
>sp|P54408|TCPG_TETPY T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3
SV=1
Length = 559
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + L+GDEYF ++TEC+NP+AC+I+LRGASKD+LNE ERNL D L VA+NI + PK
Sbjct: 350 CGLFEVKLIGDEYFTFMTECENPEACSIILRGASKDVLNEMERNLHDCLAVAKNIFVNPK 409
Query: 107 LVPGGGAVEMAVS 119
LVPGGGA+EM VS
Sbjct: 410 LVPGGGAIEMEVS 422
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 MFGPGSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
MF G P++VL+ NTKR+SG+K QL NI A K + S IVT
Sbjct: 1 MFQGGHQPIMVLNQNTKRESGKKAQLANISASKAV-SEIVT 40
>sp|P50143|TCPG_XENLA T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2
SV=2
Length = 547
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 61/71 (85%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDEYF +IT+C++PKACTI+LRGASK++L E ERNLQDA+ V RN++++P LVPGGGA
Sbjct: 354 IGDEYFTFITDCKDPKACTIVLRGASKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGAS 413
Query: 115 EMAVSHVSASK 125
EM+V+H+ K
Sbjct: 414 EMSVAHILTEK 424
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 23/34 (67%)
Query: 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
PVLVLS N KR+SGRKVQ NI A K I I T
Sbjct: 5 PVLVLSQNMKRESGRKVQSGNINAAKTIADIIRT 38
>sp|O74341|TCPG_SCHPO T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct3 PE=1 SV=1
Length = 528
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 57/71 (80%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
LGDEY+ ++T C+NPKACTILLRG SKD++NE ERNLQDA+ VARN+ PKL PGGGA
Sbjct: 353 LGDEYYTFLTGCKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGAT 412
Query: 115 EMAVSHVSASK 125
EMAVS A K
Sbjct: 413 EMAVSVRLAEK 423
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 6 SAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
+PV V+++N R G K Q+ NIQA K + I T
Sbjct: 2 QSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRT 37
>sp|P39077|TCPG_YEAST T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT3 PE=1 SV=2
Length = 534
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 57/72 (79%)
Query: 54 LLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGA 113
++GDEYF ++ C+ PKACTI+LRG SKD+LNE +RNLQDA+ VARN+ML P L PGGGA
Sbjct: 359 MIGDEYFSFLDNCKEPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGA 418
Query: 114 VEMAVSHVSASK 125
EMAVS A K
Sbjct: 419 TEMAVSVKLAEK 430
>sp|Q9LKI7|TCPG_THAWE T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2
SV=1
Length = 558
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 55/65 (84%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G+EYF + EC++PKACTI+LRG SKD+LNE ERNL DA+ V RN++ +P+L+PGGGA
Sbjct: 370 IGEEYFAFFEECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGAT 429
Query: 115 EMAVS 119
EMAVS
Sbjct: 430 EMAVS 434
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 1 MFGPGSAPVLVLSSNTKRDSGRKVQLENIQAGKYI 35
M G P++VL+S T+R +GR+ QL NIQA + +
Sbjct: 1 MANQGMGPIMVLNSKTQRSTGRQAQLGNIQAARAV 35
>sp|Q8SR76|TCPG_ENCCU T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CCT3 PE=1 SV=1
Length = 519
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 56 GDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVE 115
G+EY+C + C +PKAC++++RG +KD+L+E ERN DA+ VA++I + PKL PGGGA E
Sbjct: 351 GEEYYCKFSRCAHPKACSVVIRGPTKDILDELERNFMDAVKVAKSIFISPKLCPGGGAAE 410
Query: 116 MAVSHVSASKDLLNETE----RNLQDALHVARNIMLE 148
MA++H NE E + AL + +I+LE
Sbjct: 411 MAMAHELMQSAGDNEVEAEVFSRMASALTIIPSILLE 447
>sp|Q9YDK6|THSA_AERPE Thermosome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsA PE=3
SV=2
Length = 554
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G++ +I +NPK+ TILLRGA+ LL+E ERN++DALH RNI+ EPK+V GGGAV
Sbjct: 357 VGEDKMVFIEGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAV 416
Query: 115 EMAVS 119
E+ ++
Sbjct: 417 EVELA 421
>sp|Q9V2S9|THSA_SULSO Thermosome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsA PE=3 SV=2
Length = 559
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G++ +I +N KA ILLRG++ L+E ER++ DALH RNI+LEP ++PGGGA+
Sbjct: 360 VGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAI 419
Query: 115 EMAVS 119
E+ ++
Sbjct: 420 ELELA 424
>sp|P46219|THSA_SULSH Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1
Length = 560
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G++ +I +N KA ILLRG++ L+E ER++ DALH RNI+LEP ++PGGGA+
Sbjct: 360 VGNDKMVFIEGAKNLKAVNILLRGSNDMALDEAERSINDALHALRNILLEPVILPGGGAI 419
Query: 115 EMAVS 119
E+ ++
Sbjct: 420 ELELA 424
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+GDE +I C+NPKA TIL+RG S+ +++E ER+LQDA+ V + + K+V GGGA
Sbjct: 355 VGDEKMVFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAP 414
Query: 115 EMAVS 119
E+ V+
Sbjct: 415 EIEVA 419
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G++ +I +NP+A ILLRG++ L+E ER+L DALH RN++++P +V GGGAV
Sbjct: 361 IGNDKMVFIEGAKNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAV 420
Query: 115 E 115
E
Sbjct: 421 E 421
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G++ +I +NPKA ILLRG++ L+E ER++ DALH RN++++P +V GGGAV
Sbjct: 361 VGNDKMVFIEGAKNPKAVNILLRGSNDMALDEAERSINDALHSLRNVLMKPMIVAGGGAV 420
Query: 115 E 115
E
Sbjct: 421 E 421
>sp|P80313|TCPH_MOUSE T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1
Length = 544
Score = 63.9 bits (154), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + +G E + + T C K CTI+LRG ++ + ETER+L DA+ + R +
Sbjct: 345 CQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDS 404
Query: 107 LVPGGGAVEMAVSH 120
+V GGGA+EM +S
Sbjct: 405 VVAGGGAIEMELSK 418
>sp|Q2NKZ1|TCPH_BOVIN T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=1 SV=1
Length = 543
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + +G E + + T C K CTI+LRG ++ + ETER+L DA+ + R +
Sbjct: 345 CQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDS 404
Query: 107 LVPGGGAVEMAVS 119
+V GGGA+EM +S
Sbjct: 405 VVAGGGAIEMELS 417
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%)
Query: 58 EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMA 117
E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V ++I+ + K++ GGGA E+
Sbjct: 358 ENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIE 417
Query: 118 VS 119
+S
Sbjct: 418 LS 419
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G++ +I +NPK+ TILLRG + L++E ER+L DAL V + +++ K+V GGGAV
Sbjct: 362 VGEDKMVFIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAV 421
Query: 115 EMAVSHV 121
E V+ V
Sbjct: 422 EAEVAKV 428
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 45/62 (72%)
Query: 58 EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMA 117
E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V ++I+ + K++ GGGA E+
Sbjct: 358 ENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIE 417
Query: 118 VS 119
+S
Sbjct: 418 LS 419
>sp|Q5R5C8|TCPH_PONAB T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1
Length = 543
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + +G E + + T C K CT +LRG ++ + ETER+L DA+ + R +
Sbjct: 345 CQVFEETQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDS 404
Query: 107 LVPGGGAVEMAVS 119
+V GGGA+EM +S
Sbjct: 405 VVAGGGAIEMELS 417
>sp|Q99832|TCPH_HUMAN T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2
Length = 543
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + +G E + + T C K CT +LRG ++ + ETER+L DA+ + R +
Sbjct: 345 CQVFEETQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDS 404
Query: 107 LVPGGGAVEMAVS 119
+V GGGA+EM +S
Sbjct: 405 VVAGGGAIEMELS 417
>sp|O24731|THSA_THEK8 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA
PE=3 SV=1
Length = 549
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGA- 113
L E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V +++M + ++P GGA
Sbjct: 355 LAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAP 414
Query: 114 -VEMAVS 119
+E+A+S
Sbjct: 415 EIELAIS 421
>sp|O04450|TCPE_ARATH T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana
GN=At1g24510 PE=2 SV=1
Length = 535
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 58 EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMA 117
E YI C N KA T+ +RG +K ++ ET+R++ DAL VARN++ +V GGGA E+A
Sbjct: 365 ERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGGAAEIA 424
Query: 118 VS-HVSASKD 126
S V A+ D
Sbjct: 425 CSLAVDAAAD 434
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 45/62 (72%)
Query: 58 EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMA 117
E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V ++I+ + K++P GGA E+
Sbjct: 358 ENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIE 417
Query: 118 VS 119
++
Sbjct: 418 LA 419
>sp|Q5ZJK8|TCPH_CHICK T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1
Length = 553
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + +G + + + T C K CTI+LRG ++ + ETER+L DA+ + R +
Sbjct: 345 CELFEEIQIGGDRYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDS 404
Query: 107 LVPGGGAVEMAVSH 120
+V GGGA+EM +S
Sbjct: 405 VVAGGGAIEMELSK 418
>sp|P54409|TCPH_TETPY T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1
Length = 558
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G E + +C + K+ TI+LRG ++ + E ER+L DA+ + R M K+VPGGGA+
Sbjct: 353 IGAERYNLFQDCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAI 412
Query: 115 EMAVSHV 121
E+ +S +
Sbjct: 413 ELEISRL 419
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 124 SKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGL 183
++ + E ER+L DA+ + R M K+VPGGGA+E+ +S + G+V + +
Sbjct: 378 AEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAIELEISRLLRLHSRKTEGKVQLVINA 437
Query: 184 HAGGPGLIP 192
A +IP
Sbjct: 438 FAKALEVIP 446
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGA- 113
L E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V +++M + ++P GGA
Sbjct: 355 LAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAP 414
Query: 114 -VEMAVSHVSASKDLLNETE---RNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSS 167
+E+A+ +K + + N DAL + + E G VEM V +S
Sbjct: 415 EIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAEN---AGLDTVEMLVKVISE 469
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGA- 113
L E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V +++M + ++P GGA
Sbjct: 355 LAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAP 414
Query: 114 -VEMAVSHVSASKDLLNETE---RNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSS 167
+E+A+ +K + + N DAL + + E G VEM V +S
Sbjct: 415 EIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAEN---AGLDTVEMLVKVISE 469
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 58 EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGA--VE 115
E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V ++I+ + K+V GGA +E
Sbjct: 358 ENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIE 417
Query: 116 MAVS 119
+A+S
Sbjct: 418 LAIS 421
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%)
Query: 58 EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMA 117
E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V ++I+ + K+V GGA E+
Sbjct: 358 ENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIE 417
Query: 118 VS 119
+S
Sbjct: 418 LS 419
>sp|P39076|TCPB_YEAST T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT2 PE=1 SV=1
Length = 527
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + +LG++ F + C+ +ACTI+LRGA+ L+E ER+L DAL V E +
Sbjct: 340 CDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETR 399
Query: 107 LVPGGGAVEMAVSH 120
V GGG EM +S
Sbjct: 400 TVLGGGCAEMVMSK 413
>sp|P54411|TCPE2_AVESA T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1
Length = 535
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 62 YITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVS-H 120
YI +C N KA TI +RG +K ++ ET+R++ DAL VARN+++ +V GGG+ E++ S
Sbjct: 369 YIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIA 428
Query: 121 VSASKD 126
V A+ D
Sbjct: 429 VEAAAD 434
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 44/64 (68%)
Query: 57 DEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEM 116
DE +I EC++PKA +I+LRG++K + E ER L+DA+ V + + + ++V GGGA E+
Sbjct: 350 DEVLTFIEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEV 409
Query: 117 AVSH 120
++
Sbjct: 410 EIAR 413
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 2 FGPGSAPVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVT 41
G P+ +L +T R GR+ Q NI AGK + ++ T
Sbjct: 1 MAQGQQPIFILPQDTSRYVGREAQRINILAGKVLAETVRT 40
>sp|P40412|TCPE1_AVESA T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1
Length = 535
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 62 YITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVS-H 120
YI +C N KA TI +RG +K ++ ET+R++ DAL VARN+++ +V GGG+ E++ S
Sbjct: 369 YIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGGSAEISCSIA 428
Query: 121 VSASKD 126
V A+ D
Sbjct: 429 VEAAAD 434
>sp|P39079|TCPZ_YEAST T-complex protein 1 subunit zeta OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT6 PE=1 SV=1
Length = 546
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G+E F Y+TE +PK+CTIL++G++ L +T+ ++D L N++ + ++PG GA
Sbjct: 359 IGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAF 418
Query: 115 EMAVSHVSASKDL 127
+A+S S ++
Sbjct: 419 YIALSRYLRSANM 431
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 58 EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMA 117
E ++ C+NPKA TIL+RG ++ +++E ER L+DA+ V ++I+ + K+V GGA E+
Sbjct: 358 ENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIE 417
Query: 118 VS 119
++
Sbjct: 418 LA 419
>sp|Q5RCD2|TCPZ_PONAB T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3
Length = 531
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
LG+E F +I +C NP++ T+L++G +K L + + ++D L RN + + +VPG GAV
Sbjct: 355 LGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVRNAIDDGCVVPGAGAV 414
Query: 115 EMAVSH 120
E+A++
Sbjct: 415 EVAMAE 420
>sp|P80314|TCPB_MOUSE T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4
Length = 535
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + ++G++ + + +ACTI+LRGA++ +L+E ER+L DAL V + +P+
Sbjct: 346 CKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPR 405
Query: 107 LVPGGGAVEMAVSHVSASKDLLNET 131
V GGG EM ++H A L N T
Sbjct: 406 TVYGGGCSEMLMAH--AVTQLANRT 428
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 123 ASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLG 182
A++ +L+E ER+L DAL V + +P+ V GGG EM ++H + + G+ V +
Sbjct: 378 ATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAME 437
Query: 183 LHAGGPGLIP 192
A ++P
Sbjct: 438 SFAKALRMLP 447
>sp|Q5XIM9|TCPB_RAT T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1
SV=3
Length = 535
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 47 CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPK 106
C + ++G++ + + +ACTI+LRGA++ +L+E ER+L DAL V + +P+
Sbjct: 346 CKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPR 405
Query: 107 LVPGGGAVEMAVSH 120
V GGG EM ++H
Sbjct: 406 TVYGGGCSEMLMAH 419
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 123 ASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLG 182
A++ +L+E ER+L DAL V + +P+ V GGG EM ++H + G+ V +
Sbjct: 378 ATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTMLASRTPGKEAVAME 437
Query: 183 LHAGGPGLIP 192
A ++P
Sbjct: 438 SFAKALRMLP 447
>sp|O77323|TCPH_PLAF7 T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate
3D7) GN=MAL3P3.6 PE=3 SV=1
Length = 539
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 31 AGKYIDSSIVTLNHWL---CSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNET 87
G + +S+ LN + C + +G+E + EC K+ TI+LRG +K + E
Sbjct: 328 TGALVQTSLFNLNDDVLGTCGVFEEVQIGNERYNIFKECLKTKSVTIILRGGAKQFIEEV 387
Query: 88 ERNLQDALHVARNIMLEPKLVPGGGAVEMAVS 119
ER++ DA+ + + ++VPG G++EM +S
Sbjct: 388 ERSINDAIMIVLRCITNSEIVPGAGSIEMQLS 419
>sp|Q9V2T3|THSB_DESMO Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis
GN=thsB PE=3 SV=1
Length = 502
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 46/66 (69%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
+G++ +I C+NP++ +I++RG + L++E ER+++DAL + + + K++PGGGA
Sbjct: 339 VGEDKMVFIEGCKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAA 398
Query: 115 EMAVSH 120
E+ ++
Sbjct: 399 EIELAK 404
>sp|P46550|TCPZ_CAEEL T-complex protein 1 subunit zeta OS=Caenorhabditis elegans GN=cct-6
PE=1 SV=1
Length = 539
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
LG+E + +I EC+ PK+ T+L++G +K + + + + D L N +++ ++PG A
Sbjct: 359 LGEEKYTFIEECRAPKSVTLLIKGPNKHTITQIKDAIHDGLRAVFNTIVDKAVLPGAAAF 418
Query: 115 EMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLL 174
E+A ++V KD+ N R A A+ +++ PK + G + + V +
Sbjct: 419 EIA-AYVMLKKDVENLKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQETLVKLIEEKTAA 477
Query: 175 G-RVVVTLGLHAGG 187
G + V L L GG
Sbjct: 478 GPDIAVGLDLETGG 491
>sp|Q3MHL7|TCPZ_BOVIN T-complex protein 1 subunit zeta OS=Bos taurus GN=CCT6A PE=1 SV=3
Length = 531
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 55 LGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAV 114
LG+E F +I +C NP++ T+L++G +K L + + ++D L +N + + +VPG GAV
Sbjct: 355 LGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAV 414
Query: 115 EMAVSH 120
E+A++
Sbjct: 415 EVAMAE 420
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,894,791
Number of Sequences: 539616
Number of extensions: 3336050
Number of successful extensions: 9224
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 8752
Number of HSP's gapped (non-prelim): 556
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)