Query psy2833
Match_columns 216
No_of_seqs 188 out of 1944
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 18:05:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2833.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2833hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_G T-complex protein 1 sub 100.0 1E-36 3.5E-41 287.3 17.8 196 7-213 295-499 (515)
2 3iyg_A T-complex protein 1 sub 100.0 1.6E-36 5.4E-41 286.9 17.2 196 8-213 298-513 (529)
3 3iyg_Z T-complex protein 1 sub 100.0 3.9E-36 1.3E-40 283.5 16.8 182 23-213 312-502 (517)
4 3iyg_H T-complex protein 1 sub 100.0 1.2E-35 4.1E-40 280.1 17.7 182 24-213 310-499 (515)
5 3iyg_B T-complex protein 1 sub 100.0 1.7E-35 5.8E-40 278.9 17.8 195 7-213 294-496 (513)
6 3iyg_D T-complex protein 1 sub 100.0 2.6E-35 8.8E-40 278.0 18.4 194 8-213 300-503 (518)
7 3iyg_Q T-complex protein 1 sub 100.0 6.1E-35 2.1E-39 275.0 18.7 195 7-213 292-497 (512)
8 3aq1_B Thermosome subunit; gro 100.0 1.3E-35 4.5E-40 278.9 13.9 195 8-214 260-462 (500)
9 3iyg_E T-complex protein 1 sub 100.0 5.1E-35 1.7E-39 275.7 17.2 183 24-213 308-500 (515)
10 3ruv_A Chaperonin, CPN; double 100.0 3.5E-35 1.2E-39 278.5 15.9 195 8-213 302-504 (543)
11 1a6d_B Thermosome (beta subuni 100.0 3.7E-35 1.3E-39 278.3 14.8 195 8-214 307-509 (543)
12 3ko1_A Chaperonin; 9-fold symm 100.0 2E-35 6.8E-40 280.7 11.8 193 9-213 317-518 (553)
13 1q3q_A Thermosome alpha subuni 100.0 5.2E-35 1.8E-39 277.6 14.0 195 8-214 309-511 (548)
14 3p9d_A T-complex protein 1 sub 100.0 7.9E-35 2.7E-39 276.9 15.1 193 9-213 315-533 (559)
15 3p9d_E T-complex protein 1 sub 100.0 8.8E-35 3E-39 276.7 14.3 185 22-213 349-543 (562)
16 1a6d_A Thermosome (alpha subun 100.0 6.1E-35 2.1E-39 276.9 12.8 195 8-214 306-508 (545)
17 3p9d_F T-complex protein 1 sub 100.0 3E-35 1E-39 279.0 10.4 185 23-213 324-522 (546)
18 3p9d_G T-complex protein 1 sub 100.0 3.8E-35 1.3E-39 278.6 7.4 195 7-213 310-512 (550)
19 3p9d_D T-complex protein 1 sub 100.0 7.6E-35 2.6E-39 275.3 8.4 194 8-213 309-513 (528)
20 3p9d_H T-complex protein 1 sub 100.0 3.7E-35 1.3E-39 279.6 3.1 196 8-213 317-533 (568)
21 3p9d_C T-complex protein 1 sub 100.0 1.1E-33 3.6E-38 270.5 11.9 182 24-213 325-571 (590)
22 3p9d_B T-complex protein 1 sub 100.0 1.9E-34 6.5E-39 272.5 4.7 182 24-213 314-503 (527)
23 1we3_A CPN60(groel); chaperoni 100.0 3.6E-30 1.2E-34 244.1 13.1 194 7-214 269-511 (543)
24 3rtk_A 60 kDa chaperonin 2; he 100.0 4.5E-30 1.5E-34 243.6 12.0 173 24-212 287-505 (546)
25 1kp8_A Groel protein; chaperon 100.0 1.3E-29 4.4E-34 240.5 12.3 193 6-214 269-509 (547)
26 1iok_A Chaperonin 60; chaperon 100.0 3.6E-30 1.2E-34 244.3 8.1 177 23-214 288-511 (545)
27 1gml_A T-complex protein 1 sub 99.4 8E-14 2.7E-18 114.6 5.9 72 7-82 99-174 (178)
28 3iyg_A T-complex protein 1 sub 99.0 3.9E-11 1.4E-15 113.2 1.4 81 110-201 371-455 (529)
29 3iyg_G T-complex protein 1 sub 99.0 1.1E-10 3.8E-15 109.9 1.4 81 110-201 364-448 (515)
30 3iyg_Z T-complex protein 1 sub 98.9 8.8E-11 3E-15 110.6 0.3 81 110-201 368-452 (517)
31 3iyg_D T-complex protein 1 sub 98.9 1.6E-10 5.5E-15 108.8 1.5 81 110-201 369-453 (518)
32 3iyg_B T-complex protein 1 sub 98.9 1.7E-10 5.8E-15 108.6 1.3 81 110-201 362-446 (513)
33 3iyg_H T-complex protein 1 sub 98.9 2.3E-10 7.8E-15 107.8 1.3 81 110-201 365-449 (515)
34 3iyg_E T-complex protein 1 sub 98.9 7.3E-10 2.5E-14 104.3 4.6 83 108-201 363-449 (515)
35 3iyg_Q T-complex protein 1 sub 98.9 3E-10 1E-14 106.7 1.7 83 108-201 359-445 (512)
36 3p9d_G T-complex protein 1 sub 98.9 2.9E-10 9.8E-15 107.9 0.5 81 110-201 378-462 (550)
37 3p9d_A T-complex protein 1 sub 98.9 2.2E-10 7.5E-15 108.9 -0.6 81 110-201 387-471 (559)
38 3p9d_E T-complex protein 1 sub 98.8 2.2E-10 7.4E-15 109.0 -1.0 81 110-201 408-492 (562)
39 3p9d_F T-complex protein 1 sub 98.8 3.6E-10 1.2E-14 107.0 0.4 84 107-201 377-467 (546)
40 3p9d_B T-complex protein 1 sub 98.8 2.4E-10 8.2E-15 107.8 -1.4 81 110-201 369-453 (527)
41 3ko1_A Chaperonin; 9-fold symm 98.8 2.2E-10 7.5E-15 108.8 -1.7 81 110-201 383-467 (553)
42 3p9d_H T-complex protein 1 sub 98.8 3.1E-10 1E-14 108.1 -0.8 81 110-201 386-472 (568)
43 3ruv_A Chaperonin, CPN; double 98.8 2.8E-10 9.5E-15 107.8 -1.4 81 110-201 369-453 (543)
44 3aq1_B Thermosome subunit; gro 98.8 2.7E-10 9.1E-15 106.9 -1.5 81 110-201 327-411 (500)
45 3p9d_C T-complex protein 1 sub 98.8 6E-10 2.1E-14 106.5 -0.2 84 107-201 434-521 (590)
46 1a6d_B Thermosome (beta subuni 98.8 3.7E-10 1.3E-14 106.9 -1.9 81 110-201 374-458 (543)
47 3p9d_D T-complex protein 1 sub 98.8 4.3E-10 1.5E-14 106.1 -2.3 84 107-201 376-463 (528)
48 1q3q_A Thermosome alpha subuni 98.7 4.7E-10 1.6E-14 106.4 -2.2 81 110-201 376-460 (548)
49 1a6d_A Thermosome (alpha subun 98.7 4.8E-10 1.6E-14 106.2 -2.3 81 110-201 373-457 (545)
50 1we3_A CPN60(groel); chaperoni 98.6 5.6E-09 1.9E-13 98.9 1.7 83 107-201 376-462 (543)
51 3rtk_A 60 kDa chaperonin 2; he 98.6 3.5E-09 1.2E-13 100.4 -1.9 81 107-201 376-460 (546)
52 1ass_A Thermosome; chaperonin, 98.6 4.1E-08 1.4E-12 79.1 4.3 59 7-69 93-154 (159)
53 1iok_A Chaperonin 60; chaperon 98.5 7.9E-09 2.7E-13 98.0 -0.2 82 107-201 378-463 (545)
54 1kp8_A Groel protein; chaperon 98.5 1E-08 3.4E-13 97.3 -0.1 83 106-201 376-462 (547)
No 1
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-36 Score=287.34 Aligned_cols=196 Identities=32% Similarity=0.447 Sum_probs=170.8
Q ss_pred CcEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ce-eceEEEEEECCeEEEEEeecCCCceEEEEEeCCChh
Q psy2833 7 APVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WL-CSSQDACLLGDEYFCYITECQNPKACTILLRGASKD 82 (216)
Q Consensus 7 ~~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~-c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~ 82 (216)
..++++++..+++ +++...+|||+++++++++++ |+ |+.|+++++|+++|+||++|+++++|||+|||+|++
T Consensus 295 ~~I~av~~~~k~~----leria~~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~ 370 (515)
T 3iyg_G 295 ANITAIRRVRKTD----NNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKE 370 (515)
T ss_pred CCceeeccCCHHH----HHHHHHHhCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHH
Confidence 4566664444443 444555799999999999986 99 999999999999999999999999999999999999
Q ss_pred hHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCCh
Q psy2833 83 LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGA 157 (216)
Q Consensus 83 ~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga 157 (216)
+++|+||+++||+++++++++++++|||||++|+++|.+|++++ .++.++++|++||++||++|++|+ |.++
T Consensus 371 ~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~Na---G~d~ 447 (515)
T 3iyg_G 371 ILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNC---GAST 447 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhc---CCCH
Confidence 99999999999999999999999999999999999999999986 899999999999999999999999 8899
Q ss_pred hHHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 158 VEMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 158 ~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
.++.. .|+..+.+ .+...+|+|+.+|++.|| .++||||+..++.+++++|.-
T Consensus 448 ~~~v~--~l~~~h~~-~~~~~~G~d~~~g~~~d~-~~~gi~dp~~vk~~al~~A~e 499 (515)
T 3iyg_G 448 IRLLT--SLRAKHTQ-ENCETWGVNGETGTLVDM-KELGIWEPLAVKLQTYKTAVE 499 (515)
T ss_pred HHHHH--HHHHHHHh-cCCCceeeeCCCCccccc-HHcCCEEcHHHHHHHHHHHHH
Confidence 98765 34332221 234478999999999988 578999999999999998764
No 2
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-36 Score=286.85 Aligned_cols=196 Identities=21% Similarity=0.256 Sum_probs=169.4
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccC------c---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeC
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLN------H---WLCSSQDACLLGDEYFCYITECQNPKACTILLRG 78 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~------~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG 78 (216)
.++++++..+++ +++...+|||++++++++++ + |+|+.|+++++|+++|+||++|+++++|||+|||
T Consensus 298 gI~av~~v~k~~----leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG 373 (529)
T 3iyg_A 298 GAMAVRRVLKRD----LKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRG 373 (529)
T ss_pred CCceeccCCHHH----HHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECC
Confidence 366666544433 44455579999999998865 2 9999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccC
Q psy2833 79 ASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVP 153 (216)
Q Consensus 79 ~t~~~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~ 153 (216)
+|+++++|+||+++||+++++++++|+++|||||++|+++|.+|++++ +++.++++|++||++||++|++|+
T Consensus 374 ~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~Na--- 450 (529)
T 3iyg_A 374 ANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNA--- 450 (529)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 999999999999999999999999999999999999999999999997 899999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhh-hhc-----CCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 154 GGGAVEMAVSHVSSCFQ-DNL-----LGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 154 Ggga~E~~~s~~L~~~a-~~~-----~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
|.++.|+.. .|+..+ ... ++..++|+|+.+|++.|| .+.||||+..++.+++++|.-
T Consensus 451 G~d~~~~v~--~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~-~~~gV~dp~~vk~~al~~A~e 513 (529)
T 3iyg_A 451 AQDSTDLVA--KLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDN-KQAGVFEPTIVKVKSLKFATE 513 (529)
T ss_pred CCCHHHHHH--HHHHHHhccccccccccCceeeeeCCCCCccCh-hhccCEecHHHHHHHHHHHHH
Confidence 889998875 344332 211 122679999999999987 568999999999999998863
No 3
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-36 Score=283.52 Aligned_cols=182 Identities=22% Similarity=0.309 Sum_probs=164.1
Q ss_pred chhhhhhhcCceeeeeecccCc----ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhHHHHHHHhchhhHHH
Q psy2833 23 KVQLENIQAGKYIDSSIVTLNH----WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVA 98 (216)
Q Consensus 23 ~~~~~~i~~G~~i~~sl~~~~~----g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~ersi~Dal~v~ 98 (216)
.+++...+|||+++++++++++ |+|+ |+++++|+++|+||++|+++++|||+|||+|+++++|+||+++||++++
T Consensus 312 ~leria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~ 390 (517)
T 3iyg_Z 312 NMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAV 390 (517)
T ss_pred HHHHHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHH
Confidence 3555556799999999999874 8999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhc
Q psy2833 99 RNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNL 173 (216)
Q Consensus 99 ~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~ 173 (216)
+++++++++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |.++.++.. .|+.. |.
T Consensus 391 r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~Na---G~d~~~~v~--~l~~~--h~ 463 (517)
T 3iyg_Z 391 KNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNS---GFDLQETLV--KVQAE--HS 463 (517)
T ss_pred HHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHc---CCCHHHHHH--HHHHH--Hh
Confidence 9999999999999999999999999987 899999999999999999999999 789998765 23332 23
Q ss_pred CCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 174 LGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 174 ~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
++..++|+|+.+|++.|| .+.||||+..++.+++++|.-
T Consensus 464 ~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~e 502 (517)
T 3iyg_Z 464 ESGQLVGVDLNTGEPMVA-AEAGIWDNYCVKKQLLHSCTV 502 (517)
T ss_pred cCCCcEEEeCCCCcccch-hhccCeecHHHHHHHHHHHHH
Confidence 456689999999999988 569999999999999988753
No 4
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-35 Score=280.06 Aligned_cols=182 Identities=21% Similarity=0.320 Sum_probs=164.6
Q ss_pred hhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhHHHHHHHhchhhHHHHH
Q psy2833 24 VQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARN 100 (216)
Q Consensus 24 ~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~ersi~Dal~v~~~ 100 (216)
+++...+|||+++++++++++ |+|+.|+++++|+++|+||++|+++++|||+|||+|+++++|+||+++||++++++
T Consensus 310 leria~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~ 389 (515)
T 3iyg_H 310 LKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRR 389 (515)
T ss_pred HHHHHHHhCCEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHH
Confidence 444555799999999999986 99999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCC
Q psy2833 101 IMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLG 175 (216)
Q Consensus 101 ~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g 175 (216)
+++|+++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |.++.++.. .|+.. |.++
T Consensus 390 ~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~~~~v~--~l~~~--h~~~ 462 (515)
T 3iyg_H 390 AIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNA---GFDATNILN--KLRAR--HAQG 462 (515)
T ss_pred HhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHH--HHHHH--hhcc
Confidence 99999999999999999999999986 899999999999999999999999 789888765 23332 2345
Q ss_pred ceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 176 RVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 176 ~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
..++|+|+.+|++.|| .++||||+..++.+++++|.-
T Consensus 463 ~~~~G~d~~~g~~~dm-~~~gI~dp~~vk~~al~~A~~ 499 (515)
T 3iyg_H 463 GMWYGVDINTEDIADN-FEAFVWEPAMVRINALTAASE 499 (515)
T ss_pred CCCeeEeCCCCccccc-HhccCEECHHHHHHHHHHHHH
Confidence 5679999999999988 578999999999999998764
No 5
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.7e-35 Score=278.89 Aligned_cols=195 Identities=22% Similarity=0.285 Sum_probs=172.0
Q ss_pred CcEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhh
Q psy2833 7 APVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDL 83 (216)
Q Consensus 7 ~~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~ 83 (216)
..+++++.-.++ .++....+||++++++++++++ |+|+.|+++.+|+++|++|++|+++++|||+|||+|+++
T Consensus 294 ~~I~av~~~~~~----~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~ 369 (513)
T 3iyg_B 294 AGVMAIEHADFV----GVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQI 369 (513)
T ss_pred cCceEEecCCHH----HHHHHHHHhCCEEecccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHH
Confidence 345666655543 3455556799999999999986 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChh
Q psy2833 84 LNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAV 158 (216)
Q Consensus 84 l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~ 158 (216)
++|+||+++||+++++++++|+++|||||++|++++.+|++++ .++.++++|++||+++|++|++|+ |.++.
T Consensus 370 l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~Na---G~d~~ 446 (513)
T 3iyg_B 370 LDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNA---GYDSA 446 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhc---CCCHH
Confidence 9999999999999999999999999999999999999999986 899999999999999999999999 88998
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 159 EMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 159 E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
++.. .|+.. |..+..++|+|+.+|++.|| .+.||||+..++.+++++|.-
T Consensus 447 ~~v~--~l~~~--h~~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~~ 496 (513)
T 3iyg_B 447 DLVA--QLRAA--HSEGKTTAGLDMKEGTIGDM-SVLGITESFQVKRQVLLSAAE 496 (513)
T ss_pred HHHH--HHHHH--HhcCCCceeecCCCCCccch-HhccCEecHHHHHHHHHHHHH
Confidence 8765 23332 23456689999999999988 468999999999999998754
No 6
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.6e-35 Score=277.95 Aligned_cols=194 Identities=20% Similarity=0.250 Sum_probs=170.3
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECC-eEEEEEeecCC-CceEEEEEeCCChh
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGD-EYFCYITECQN-PKACTILLRGASKD 82 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~-~~~~~~~~~~~-~~~~TIllrG~t~~ 82 (216)
.+++++.-.++ .+++...+|||+++++++++++ |+|+.|++.++|+ ++|+||++|++ +++|||+|||+|++
T Consensus 300 ~I~av~~~~~~----~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~ 375 (518)
T 3iyg_D 300 KIMVVKDIERE----DIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKL 375 (518)
T ss_pred CcEEEecCCHH----HHHHHHHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHH
Confidence 45555555443 3555566799999999999986 9999999999999 89999999998 89999999999999
Q ss_pred hHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCCh
Q psy2833 83 LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGA 157 (216)
Q Consensus 83 ~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga 157 (216)
+++|+||+++||++++++++++|++|||||++|++++.+|++++ .++.++++|++||+++|++|++|+ |.++
T Consensus 376 ~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~Na---G~d~ 452 (518)
T 3iyg_D 376 VIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENA---GLNP 452 (518)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhc---CCCH
Confidence 99999999999999999999999999999999999999999986 899999999999999999999999 8899
Q ss_pred hHHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 158 VEMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 158 ~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
.++.. .|+.. |..+..++|+|+.+|++.|| .+.||||+..++.+++++|.-
T Consensus 453 ~~~v~--~l~~~--h~~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~e 503 (518)
T 3iyg_D 453 ISTVT--ELRNR--HAQGEKTTGINVRKGGISNI-LEELVVQPLLVSVSALTLATE 503 (518)
T ss_pred HHHHH--HHHHH--HhccCCceeEeCCCCcccch-hhccCEEcHHHHHHHHHHHHH
Confidence 98765 23332 22455579999999999987 578999999999999988764
No 7
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.1e-35 Score=275.00 Aligned_cols=195 Identities=19% Similarity=0.212 Sum_probs=171.4
Q ss_pred CcEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecC-CCceEEEEEeCCChh
Q psy2833 7 APVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQ-NPKACTILLRGASKD 82 (216)
Q Consensus 7 ~~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~-~~~~~TIllrG~t~~ 82 (216)
..++++++-.+++ +++...+||++++++++++++ |+|+.|++.++|+++|++|++|+ .+++|||+|||+|++
T Consensus 292 ~~I~av~~~~~~d----le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~ 367 (512)
T 3iyg_Q 292 YNIMLVRLNSKWD----LRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDN 367 (512)
T ss_pred CCeEEEEeCCHHH----HHHHHHHhCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHH
Confidence 4577777655544 555566799999999999886 99999999999999999999997 488999999999999
Q ss_pred hHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCCh
Q psy2833 83 LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGA 157 (216)
Q Consensus 83 ~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga 157 (216)
+++|+||+++||++++++++++|++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |.++
T Consensus 368 ~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~ 444 (512)
T 3iyg_Q 368 LMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENS---GVKA 444 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhc---CCCH
Confidence 99999999999999999999999999999999999999999986 899999999999999999999999 7899
Q ss_pred hHHHHHHHHHHhhhhcCCceEEEEeeccC--CCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 158 VEMAVSHVSSCFQDNLLGRVVVTLGLHAG--GPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 158 ~E~~~s~~L~~~a~~~~g~~~~~i~~~~~--~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
.++.. +|+.. |..+..++|+|+.+| ++.|| .++||||+..++.+++++|.-
T Consensus 445 ~~~v~--~l~~~--h~~~~~~~G~d~~~~~g~~~d~-~~~gI~dp~~vk~~al~~A~~ 497 (512)
T 3iyg_Q 445 NEVIS--KLYAV--HQEGNKNVGLDIEAEVPAVKDM-LEAGVLDTYLGKYWAIKLATN 497 (512)
T ss_pred HHHHH--HHHHH--HhcCCCcEEEecCCCCCcccch-HhccCeEcHHHHHHHHHHHHH
Confidence 98765 23332 224566899999965 89887 568999999999999988754
No 8
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.3e-35 Score=278.87 Aligned_cols=195 Identities=19% Similarity=0.229 Sum_probs=171.8
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhH
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLL 84 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l 84 (216)
.++++++..+++ +++...+||++++++++++++ |+|+.|+++++|+++|+||++|+++++|||+|||+|++++
T Consensus 260 ~I~av~~~~k~~----le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l 335 (500)
T 3aq1_B 260 GIYAVRRVKKSD----LKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVV 335 (500)
T ss_dssp TCEEECSCCHHH----HHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETTCCCEEEEEEESSHHHH
T ss_pred CEEEEEeCCHHH----HHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEECCCCCceEEEEecCCcHHHH
Confidence 356665444333 444556799999999999986 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhH
Q psy2833 85 NETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVE 159 (216)
Q Consensus 85 ~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E 159 (216)
+|+||+++||+++++++++++++|||||++|++++.+|++++ ..+.++++|++||+++|++|++|+ |.++.+
T Consensus 336 ~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~Na---G~d~~~ 412 (500)
T 3aq1_B 336 DSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENA---GLDPID 412 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHT---TCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHc---CCCHHH
Confidence 999999999999999999999999999999999999999986 899999999999999999999999 889998
Q ss_pred HHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhhh
Q psy2833 160 MAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVRI 214 (216)
Q Consensus 160 ~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~ 214 (216)
+.. .|+..+ .++..++|+|+.+|++.|+ .+.||||++.++.+++++|.-+
T Consensus 413 ~v~--~l~~~h--~~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~e~ 462 (500)
T 3aq1_B 413 IMV--ELRSQH--EKGNKNAGLNVYTGEVVDM-WENDVIEPLRIKTQAINAAMEA 462 (500)
T ss_dssp HHH--HHHHHH--HTTCTTEEECTTTCCEEET-TTTTCEEEHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHh--cCCCCCeeEeCCCCCccch-HhcCCCCCHHHHHHHHHHHHHH
Confidence 875 344322 2355679999999999987 5899999999999999988643
No 9
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.1e-35 Score=275.70 Aligned_cols=183 Identities=22% Similarity=0.286 Sum_probs=163.9
Q ss_pred hhhhhhhcCceeeeeecccCc---ceeceEEEEEECC--eEEEEEeecCCCceEEEEEeCCChhhHHHHHHHhchhhHHH
Q psy2833 24 VQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGD--EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVA 98 (216)
Q Consensus 24 ~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~--~~~~~~~~~~~~~~~TIllrG~t~~~l~E~ersi~Dal~v~ 98 (216)
++....+|||+++++++++++ |+|+.|+++++|+ ++|+||++|+++++|||+|||+|+++++|+||+++||++++
T Consensus 308 le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~ 387 (515)
T 3iyg_E 308 IELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVI 387 (515)
T ss_pred HHHHHHHhCCEEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHH
Confidence 444555799999999999986 9999999999998 89999999999999999999999999999999999999999
Q ss_pred HHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhc
Q psy2833 99 RNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNL 173 (216)
Q Consensus 99 ~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~ 173 (216)
++++++|++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |.++.++.. .|+..+. .
T Consensus 388 r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~Na---G~d~~~~v~--~l~~~h~-~ 461 (515)
T 3iyg_E 388 RNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENS---GMNPIQTMT--EVRARQV-K 461 (515)
T ss_pred HHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhC---CCCHHHHHH--HHHHHHh-c
Confidence 9999999999999999999999999986 889999999999999999999999 889988765 3333221 1
Q ss_pred CCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 174 LGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 174 ~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
.+..++|+|+.+|++.|| .++||||+..++.+++++|.-
T Consensus 462 ~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~~ 500 (515)
T 3iyg_E 462 EVNPALGIDCLHKGTNDM-KHQHVIETLIGKKQQISLATQ 500 (515)
T ss_pred cCCCeeeEecCCCcccch-HhccCEEcHHHHHHHHHHHHH
Confidence 345689999999999987 578999999999999988764
No 10
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.5e-35 Score=278.48 Aligned_cols=195 Identities=19% Similarity=0.267 Sum_probs=169.8
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhH
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLL 84 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l 84 (216)
.++++++.. ...+++...+||++++++++++++ |+|+.|+++++|+++|+||++|+++++|||+|||+|++++
T Consensus 302 gI~~v~~v~----k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l 377 (543)
T 3ruv_A 302 GIVAARRVK----KSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVI 377 (543)
T ss_dssp TCEEECSCC----HHHHHHHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHH
T ss_pred CcEEEeeCC----HHHHHHHHHHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHH
Confidence 356665432 223444455799999999999986 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhH
Q psy2833 85 NETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVE 159 (216)
Q Consensus 85 ~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E 159 (216)
+|+||+++||+++++++++++++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |.++.+
T Consensus 378 ~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~~~ 454 (543)
T 3ruv_A 378 EEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENA---GLDAIE 454 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHT---TCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHH
Confidence 999999999999999999999999999999999999999986 889999999999999999999999 889998
Q ss_pred HHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 160 MAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 160 ~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
+.. .|+..+.+ .+..++|+|+.+|++.|+ .++||||+..++.+++++|.-
T Consensus 455 ~v~--~l~~~h~~-~~~~~~G~d~~~g~~~dm-~~~gI~dp~~vk~~al~~A~~ 504 (543)
T 3ruv_A 455 ILV--KVRAAHAS-NGNKCAGLNVFTGAVEDM-CENGVVEPLRVKTQAIQSAAE 504 (543)
T ss_dssp HHH--HHHHHHTT-TCCTTEEECTTTCSEEET-TTTTCEEEHHHHHHHHHHHHH
T ss_pred HHH--HHHHHHhh-cCCceeeeeCCCCccccH-HHcCCEecHHHHHHHHHHHHH
Confidence 765 33332211 455689999999999987 568999999999999988754
No 11
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3.7e-35 Score=278.26 Aligned_cols=195 Identities=20% Similarity=0.298 Sum_probs=171.6
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhH
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLL 84 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l 84 (216)
.++++++..+++ +++...+|||+++++++++++ |+|+.|+++++|+++|+||++|+++++|||+|||+|++++
T Consensus 307 ~I~av~~v~k~~----le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l 382 (543)
T 1a6d_B 307 GIYAVRRVKKSD----MDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVV 382 (543)
T ss_dssp TCEEECSCCHHH----HHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHH
T ss_pred CeeEeccCCHHH----HHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHH
Confidence 366775444333 444555799999999999986 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhH
Q psy2833 85 NETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVE 159 (216)
Q Consensus 85 ~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E 159 (216)
+|+||+++||+++++++++++++|||||++|++++.+|++++ ..+.++++|++||+++|++|++|+ |.++.+
T Consensus 383 ~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~Na---G~d~~~ 459 (543)
T 1a6d_B 383 DEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENA---GLDPID 459 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHH---TCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHc---CCChHH
Confidence 999999999999999999999999999999999999999986 889999999999999999999999 789888
Q ss_pred HHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhhh
Q psy2833 160 MAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVRI 214 (216)
Q Consensus 160 ~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~ 214 (216)
+.. .|+..+ .++..++|+|+.+|++.|+ .+.||||+..++.+++++|.-+
T Consensus 460 ~v~--~l~~~h--~~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~e~ 509 (543)
T 1a6d_B 460 ILL--KLRAEH--AKGNKTYGINVFTGEIEDM-VKNGVIEPIRVGKQAIESATEA 509 (543)
T ss_dssp HHH--HHHHHH--HTTCTTEEEETTTTEEEET-TTTTCEEEHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHH--hCCCCCeeEeCCCCcccch-hhcCceecHHHHHHHHHHHHHH
Confidence 775 344332 2455679999999999987 5789999999999999988643
No 12
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2e-35 Score=280.68 Aligned_cols=193 Identities=20% Similarity=0.285 Sum_probs=169.0
Q ss_pred EEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhHH
Q psy2833 9 VLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLN 85 (216)
Q Consensus 9 ~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~ 85 (216)
+|++++.. ...+++...+||++++++++++++ |+|+.|+++++|+++|+||++|+++++|||+|||+|+++++
T Consensus 317 I~~v~~v~----k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~ 392 (553)
T 3ko1_A 317 VLAVRRAK----KSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVD 392 (553)
T ss_dssp CEEECCCC----HHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHH
T ss_pred hhhhhhhh----hhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHH
Confidence 55665432 233444555799999999999986 99999999999999999999999999999999999999999
Q ss_pred HHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHH
Q psy2833 86 ETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEM 160 (216)
Q Consensus 86 E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~ 160 (216)
|+||+++||+++++++++++++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |.++.++
T Consensus 393 E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~~~~ 469 (553)
T 3ko1_A 393 ETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENA---GFDPIDL 469 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHH---TSCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhc---CCCHHHH
Confidence 99999999999999999999999999999999999999986 899999999999999999999999 8899987
Q ss_pred HHHHHHHHhhhhcCCc-eEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 161 AVSHVSSCFQDNLLGR-VVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 161 ~~s~~L~~~a~~~~g~-~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
.. .|+. .|..+. .++|+|+.+|++.|| .++||||+..++.+++++|.-
T Consensus 470 v~--~l~~--~h~~~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~e 518 (553)
T 3ko1_A 470 LM--KLRS--THENENNKWYGIDLYAGQPVDM-WQKGVIEPALVKMNAIKAATE 518 (553)
T ss_dssp HH--HHHH--TTCSGGGTTEEEETTTTEEEES-GGGSCEEETTHHHHHHHHHHH
T ss_pred HH--HHHH--HhhCcCCceEeEEeecCCchHH-HHhCccchhhhhhhhhhhcch
Confidence 65 2333 233444 579999999999987 578999999999999988764
No 13
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=5.2e-35 Score=277.55 Aligned_cols=195 Identities=22% Similarity=0.308 Sum_probs=171.0
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhH
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLL 84 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l 84 (216)
.++++++..+++ +++...+||++++++++++++ |+|+.|+++++|+++|+||++|+++++|||+|||+|++++
T Consensus 309 ~I~av~~~~k~~----le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l 384 (548)
T 1q3q_A 309 GIMAVRRVKKSD----MEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVI 384 (548)
T ss_dssp TCEEECSCCHHH----HHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHH
T ss_pred CcEEEccCCHHH----HHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHH
Confidence 366775444333 444556799999999999986 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhH
Q psy2833 85 NETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVE 159 (216)
Q Consensus 85 ~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E 159 (216)
+|+||+++||+++++++++++++|||||++|++++.+|++++ .++.++++|++||+++|++|++|+ |.++.+
T Consensus 385 ~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~Na---G~d~~~ 461 (548)
T 1q3q_A 385 DEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENA---GLDTVE 461 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHT---TCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHc---CCCHHH
Confidence 999999999999999999999999999999999999999986 799999999999999999999999 889998
Q ss_pred HHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhhh
Q psy2833 160 MAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVRI 214 (216)
Q Consensus 160 ~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~ 214 (216)
+.. .|+..+. ++..++|+|+.+|++.|+ .+.||||++.++.+++++|.-+
T Consensus 462 ~v~--~l~~~h~--~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~e~ 511 (548)
T 1q3q_A 462 MLV--KVISEHK--NRGLGIGIDVFEGKPADM-LEKGIIEPLRVKKQAIKSASEA 511 (548)
T ss_dssp HHH--HHHHHHH--HHCTTEEEETTTTEEEET-TTTTCEEEHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHhh--cCCCCcceeCCCCCccch-hhcCCEecHHHHHHHHHHHHHH
Confidence 765 3443221 234469999999999987 5899999999999999988643
No 14
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=7.9e-35 Score=276.87 Aligned_cols=193 Identities=21% Similarity=0.239 Sum_probs=167.0
Q ss_pred EEEEecCcccccccchhhhhhhcCceeeeee------cccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCC
Q psy2833 9 VLVLSSNTKRDSGRKVQLENIQAGKYIDSSI------VTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGA 79 (216)
Q Consensus 9 ~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl------~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~ 79 (216)
++++++..+++ +++...+|||++++++ +++++ |+|+.|+++++|+++|+||++|+++++|||+|||+
T Consensus 315 I~av~~~~k~~----le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~ 390 (559)
T 3p9d_A 315 IMGVRRCKKED----LRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGA 390 (559)
T ss_dssp CEEESSCCHHH----HHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEES
T ss_pred CceEccCCHHH----HHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCC
Confidence 45555433333 4445567999999999 67665 99999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCC
Q psy2833 80 SKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPG 154 (216)
Q Consensus 80 t~~~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~G 154 (216)
|+++++|+||+++||++++++++++|++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |
T Consensus 391 te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G 467 (559)
T 3p9d_A 391 NDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNA---A 467 (559)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTS---S
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHC---C
Confidence 99999999999999999999999999999999999999999999986 899999999999999999999999 7
Q ss_pred CChhHHHHHHHHHHhhhhcCCce------------EEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 155 GGAVEMAVSHVSSCFQDNLLGRV------------VVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 155 gga~E~~~s~~L~~~a~~~~g~~------------~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
.++.++.. .|+..+ ..+.. ++|+|+.+|++.|| .++||||+..++.+++++|.-
T Consensus 468 ~d~~~vv~--~l~~~h--~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm-~~~gI~dp~~vk~~al~~A~e 533 (559)
T 3p9d_A 468 KDSSELVA--KLRSYH--AASQMAKPEDVKRRSYRNYGLDLIRGKIVDE-IHAGVLEPTISKVKSLKSALE 533 (559)
T ss_dssp SCCHHHHH--HHHHHH--HTTSCCC----CCCCCCCEEECTTSSSEEES-TTSSCCEEHHHHHHHHHHHHH
T ss_pred CCHHHHHH--HHHHHH--hccccccccccccccccceeEECCCCcEeeh-hhccCEecHHHHHHHHHHHHH
Confidence 78888765 233322 12222 69999999999988 578999999999999988764
No 15
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=8.8e-35 Score=276.71 Aligned_cols=185 Identities=20% Similarity=0.213 Sum_probs=164.6
Q ss_pred cchhhhhhhcCceeeeeecccCc---ceeceEEEEEECC--eEEEEEeecCCCceEEEEEeCCChhhHHHHHHHhchhhH
Q psy2833 22 RKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGD--EYFCYITECQNPKACTILLRGASKDLLNETERNLQDALH 96 (216)
Q Consensus 22 ~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~--~~~~~~~~~~~~~~~TIllrG~t~~~l~E~ersi~Dal~ 96 (216)
+.+++...+|||+++++++++++ |+|+.|+++++|+ ++|+||++|+++++|||+|||+|+++++|+||+++||++
T Consensus 349 ~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~ 428 (562)
T 3p9d_E 349 QELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLC 428 (562)
T ss_dssp TTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 33555556799999999999986 9999999999995 899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhh
Q psy2833 97 VARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQD 171 (216)
Q Consensus 97 v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~ 171 (216)
+++++++++++|||||++|++++.+|++++ .++.++++|++||+++|++|++|+ |.++.++.. .|+..+.
T Consensus 429 ~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~~~vv~--~l~~~h~ 503 (562)
T 3p9d_E 429 VVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENS---GLDPIGTLS--TLKSKQL 503 (562)
T ss_dssp HHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTT---TSCHHHHHH--HHHHHHH
T ss_pred HHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHH--HHHHHHh
Confidence 999999999999999999999999999986 889999999999999999999999 889998765 2333221
Q ss_pred hcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 172 NLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 172 ~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
+ .+..++|+|+.+|++.|+ .++||||+..++.+++++|.-
T Consensus 504 ~-~~~~~~G~d~~~g~~~dm-~~~gI~dp~~vk~~al~~A~e 543 (562)
T 3p9d_E 504 K-EKISNIGVDCLGYGSNDM-KELFVVDPFIGKKQQILLATQ 543 (562)
T ss_dssp H-TTTSSBCCBTTTTBCCBT-TTTTCEEEHHHHHHHHHHHHH
T ss_pred h-cCCCceeEecCCCcccch-HhccCEEcHHHHHHHHHHHHH
Confidence 1 344579999999999988 578999999999999988764
No 16
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=6.1e-35 Score=276.89 Aligned_cols=195 Identities=23% Similarity=0.298 Sum_probs=171.2
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhH
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLL 84 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l 84 (216)
.++++++..+++ +++...+||++++++++++++ |+|+.|+++++|+++|+||++|+++++|||+|||+|++++
T Consensus 306 ~I~av~~~~k~~----le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l 381 (545)
T 1a6d_A 306 GIYAVRRVKKSD----MEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVV 381 (545)
T ss_dssp TCEEECSCCHHH----HHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTH
T ss_pred CeeEeccCCHHH----HHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHH
Confidence 356665443333 444556799999999999986 9999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhH
Q psy2833 85 NETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVE 159 (216)
Q Consensus 85 ~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E 159 (216)
+|+||+++||+++++++++++++|||||++|++++.+|++++ ..+.++++|++||+++|++|++|+ |.++.+
T Consensus 382 ~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~Na---G~d~~~ 458 (545)
T 1a6d_A 382 SEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENA---GIDPIN 458 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHH---TSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHc---CCCHHH
Confidence 999999999999999999999999999999999999999986 899999999999999999999999 789988
Q ss_pred HHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhhh
Q psy2833 160 MAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVRI 214 (216)
Q Consensus 160 ~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~ 214 (216)
+.. .|+..+ .++..++|+|+.+|++.|+ .+.||||+..++.++++++.-+
T Consensus 459 ~v~--~l~~~h--~~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~e~ 508 (545)
T 1a6d_A 459 TLI--KLKADD--EKGRISVGVDLDNNGVGDM-KAKGVVDPLRVKTHALESAVEV 508 (545)
T ss_dssp HHH--HHHHHH--HTTCTTEEEETTTTEEEEH-HHHTCEEEHHHHHHHHHHHHHH
T ss_pred HHH--HHHHHh--hcCCCCcceecccCccccc-hhcCccccHHHHHHHHHHHHHH
Confidence 775 344322 2355579999999999987 5789999999999999988643
No 17
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=3e-35 Score=279.05 Aligned_cols=185 Identities=19% Similarity=0.283 Sum_probs=163.0
Q ss_pred chhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhHHHHHHHhchhhHHHH
Q psy2833 23 KVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVAR 99 (216)
Q Consensus 23 ~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~ersi~Dal~v~~ 99 (216)
.+++...+|||+++++++++++ |+|+.|+++++|+++|+||++|+++++|||+|||+|+++++|+||+++||+++++
T Consensus 324 ~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r 403 (546)
T 3p9d_F 324 NMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVA 403 (546)
T ss_dssp HHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence 3555556799999999999986 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCeEEecCCchhHHHHHHHhh---hh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHH-hh
Q psy2833 100 NIMLEPKLVPGGGAVEMAVSHVSAS---KD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSC-FQ 170 (216)
Q Consensus 100 ~~~~~~~vV~GGGa~E~~ls~~L~~---~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~-~a 170 (216)
++++++++|||||++|+++|.+|++ |+ .++.++++|++||+++|++|++|+ |.++.++.. .|+. |+
T Consensus 404 ~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~~~~v~--~l~~~h~ 478 (546)
T 3p9d_F 404 NVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNS---GFDPLDVLA--MVEDELD 478 (546)
T ss_dssp HHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTT---CCTTTTCCH--HHHHHHH
T ss_pred HHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHc---CCCHHHHHH--HHHHHhh
Confidence 9999999999999999999999999 44 899999999999999999999999 778887654 2332 22
Q ss_pred h--hcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 171 D--NLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 171 ~--~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
. ..++..++|+|+.+|++.|| .+.||||+..++.++++++.-
T Consensus 479 ~~~~~~~~~~~G~d~~~g~~~d~-~~~gI~dp~~vk~~al~~A~~ 522 (546)
T 3p9d_F 479 DAQDSDETRYVGVDLNIGDSCDP-TIEGIWDSYRVLRNAITGATG 522 (546)
T ss_dssp HHTTSTTSSCCCCBTTTTBCCCS-GGGTCEEEHHHHHHHHHHHHH
T ss_pred hhhcccCCceeeEeCCCCeecch-HhccCEecHHHHHHHHHHHHH
Confidence 1 11233579999999999987 578999999999999988753
No 18
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=3.8e-35 Score=278.62 Aligned_cols=195 Identities=21% Similarity=0.276 Sum_probs=170.7
Q ss_pred CcEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhh
Q psy2833 7 APVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDL 83 (216)
Q Consensus 7 ~~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~ 83 (216)
+.++++.+..+++ +++...+||++++++++++++ |+|+.|+++++|+++|++|++|+++++|||+|||+|+++
T Consensus 310 ~gI~~v~~v~k~~----lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~ 385 (550)
T 3p9d_G 310 RNIFCAGRVSADD----MNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQV 385 (550)
T ss_dssp GTCEEEECCCTTH----HHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHH
T ss_pred cCCccccCcCHHH----HHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHH
Confidence 3456665554433 344455799999999999986 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChh
Q psy2833 84 LNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAV 158 (216)
Q Consensus 84 l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~ 158 (216)
++|+||+++||+++++++++++++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |.++.
T Consensus 386 l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~~ 462 (550)
T 3p9d_G 386 IAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENA---GFDAI 462 (550)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTS---CSCHH
T ss_pred HHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhc---CCCHH
Confidence 9999999999999999999999999999999999999999986 899999999999999999999999 88999
Q ss_pred HHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 159 EMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 159 E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
++.. .|+..+ .++..++|+|+.+|++.|| .++||||+..++.+++++|.-
T Consensus 463 ~vv~--~l~~~h--~~~~~~~G~d~~~g~~~dm-~~~gI~dp~~vk~~al~~A~~ 512 (550)
T 3p9d_G 463 EILN--KLRLAH--SKGEKWYGVVFETENIGDN-FAKFVWEPALVKINALNSATE 512 (550)
T ss_dssp HHHH--HHHHHH--HHSCSCCCBCSSSSSBCCH-HHHTCEEEHHHHHHHHHHHHH
T ss_pred HHHH--HHHHHH--hcCCCceeeeCCCCcccch-HhccCEecHHHHHHHHHHHHH
Confidence 8765 333322 2355579999999999987 578999999999999988764
No 19
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=7.6e-35 Score=275.33 Aligned_cols=194 Identities=17% Similarity=0.219 Sum_probs=170.8
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecC--C-CceEEEEEeCCCh
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQ--N-PKACTILLRGASK 81 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~--~-~~~~TIllrG~t~ 81 (216)
.++++++..+++ +++...+||++++++++++++ |+|+.|++.++|+++|++|++|+ + +++|||+|||+|+
T Consensus 309 ~I~av~~~~k~~----le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te 384 (528)
T 3p9d_D 309 NIMVVKDIEREE----IEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANN 384 (528)
T ss_dssp SCCEEECCCTHH----HHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSST
T ss_pred CcEEEEeCCHHH----HHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCH
Confidence 467777544443 444556799999999999876 99999999999999999999998 6 8999999999999
Q ss_pred hhHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCC
Q psy2833 82 DLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGG 156 (216)
Q Consensus 82 ~~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggg 156 (216)
++++|+||+++||++++++++++|++|||||++|++++.+|++++ .++.++++|++||+++|++|++|+ |.+
T Consensus 385 ~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d 461 (528)
T 3p9d_D 385 MIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENA---GLN 461 (528)
T ss_dssp THHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTT---SSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHc---CCC
Confidence 999999999999999999999999999999999999999999986 899999999999999999999999 889
Q ss_pred hhHHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 157 AVEMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 157 a~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
+.++.. .|+ +.|..+..++|+|+.+|++.|| .++||||+..++.+++++|.-
T Consensus 462 ~~~vv~--~l~--~~h~~~~~~~G~d~~~g~~~dm-~~~gI~dp~~vk~~al~~A~e 513 (528)
T 3p9d_D 462 SIKVVT--ELR--SKHENGELNDGISVRRSGTTNT-YEEHILQPVLVSTSAITLASE 513 (528)
T ss_dssp HHHHHH--HHT--TCCCSSSCCCCCCSSSSSCCCH-HHHCCEEEHHHHHHHHHHHHH
T ss_pred HHHHHH--HHH--HHHhccCCccceecCCCCccch-HhccCeecHHHHHHHHHHHHH
Confidence 998765 232 3334566689999999999987 578999999999999988764
No 20
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.7e-35 Score=279.60 Aligned_cols=196 Identities=17% Similarity=0.179 Sum_probs=169.6
Q ss_pred cEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecC--CCceEEEEEeCCChh
Q psy2833 8 PVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQ--NPKACTILLRGASKD 82 (216)
Q Consensus 8 ~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~--~~~~~TIllrG~t~~ 82 (216)
.+++++.-.+++ +++...+|||+++++++++++ |+|+.|+++++|+++|+||++|+ ++++|||+|||+|++
T Consensus 317 gI~av~~v~~~~----leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~ 392 (568)
T 3p9d_H 317 GILVLKVPSKFE----LRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQN 392 (568)
T ss_dssp TCEEECCCCHHH----HHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHH
T ss_pred CeEEEecCCHHH----HHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHH
Confidence 355665554433 444556799999999999886 99999999999999999999998 799999999999999
Q ss_pred hHHHHHHHhchhhHHHHHHhc--CCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCC
Q psy2833 83 LLNETERNLQDALHVARNIML--EPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGG 155 (216)
Q Consensus 83 ~l~E~ersi~Dal~v~~~~~~--~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Gg 155 (216)
+++|+||+++||+++++++++ |+++|||||++|+++|.+|++++ .+++++++|++||++||++|++|+ |.
T Consensus 393 ~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~Na---G~ 469 (568)
T 3p9d_H 393 NLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETA---GL 469 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHH---TC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHc---CC
Confidence 999999999999999999999 99999999999999999999996 899999999999999999999999 88
Q ss_pred ChhHHHHHHHHHHhhhh------cCCceEEEEeeccCC---CCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 156 GAVEMAVSHVSSCFQDN------LLGRVVVTLGLHAGG---PGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 156 ga~E~~~s~~L~~~a~~------~~g~~~~~i~~~~~~---~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
++.++.. .|+..+.. ..+..++|+|+.+|+ +.|| .++||||+..++.+++++|.-
T Consensus 470 d~~~~v~--~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~-~~~gI~dp~~vk~~al~~A~e 533 (568)
T 3p9d_H 470 DVNEVLP--NLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDI-REENIYDMLATKKFAINVATE 533 (568)
T ss_dssp CHHHHHH--HHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHH-HHHHHHHHHHHHHHHHHCCEE
T ss_pred CHHHHHH--HHHHHhhhhcccccccCCCceeEcccCCCcccccCh-HHccCEEcHHHHHHHHHHHHH
Confidence 9998875 34332211 125567999999997 8877 568999999999999998753
No 21
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.1e-33 Score=270.51 Aligned_cols=182 Identities=31% Similarity=0.484 Sum_probs=158.3
Q ss_pred hhhhhhhcCceeeeeecccCc---ce-eceEEEEEECCeEEEEEeecCCCce----------------------------
Q psy2833 24 VQLENIQAGKYIDSSIVTLNH---WL-CSSQDACLLGDEYFCYITECQNPKA---------------------------- 71 (216)
Q Consensus 24 ~~~~~i~~G~~i~~sl~~~~~---g~-c~~v~~~~ig~~~~~~~~~~~~~~~---------------------------- 71 (216)
++...++|||+++++++++++ |+ |+.|+++++|+++|+||++|++++.
T Consensus 325 le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~ 404 (590)
T 3p9d_C 325 NNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAA 404 (590)
T ss_dssp HHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC----------------------------------
T ss_pred HHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHH
Confidence 444455699999999999886 99 9999999999999999999988877
Q ss_pred ----------------------------EEEEEeCCChhhHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHh
Q psy2833 72 ----------------------------CTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSA 123 (216)
Q Consensus 72 ----------------------------~TIllrG~t~~~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~ 123 (216)
|||+|||+|+++++|.||+++||++++++++++|++|||||++|+++|.+|+
T Consensus 405 ~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~ 484 (590)
T 3p9d_C 405 NRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLA 484 (590)
T ss_dssp -----------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999
Q ss_pred hhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCccc
Q psy2833 124 SKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVF 198 (216)
Q Consensus 124 ~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~ 198 (216)
+++ .++.++++|++||+++|++|++|+ |.++.++.. .|+.. |..+..++|+|+.+|++.|| .++|||
T Consensus 485 ~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~~~vv~--~l~~~--h~~~~~~~G~d~~~g~~~dm-~~~gI~ 556 (590)
T 3p9d_C 485 EKAKQLEGIQQWPYQAVADAMECIPRTLIQNA---GGDPIRLLS--QLRAK--HAQGNFTTGIDGDKGKIVDM-VSYGIW 556 (590)
T ss_dssp HHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTT---CSCHHHHHH--HHHHH--HTTSCTTCBCCTTSSSCBCT-TTTTCC
T ss_pred HHhhcCChHHHHHHHHHHHHHHHHHHHHHHHc---CCCHHHHHH--HHHHH--HhcCCCCEeEeCCCCeEeeh-HHcCCe
Confidence 985 899999999999999999999999 889988765 33332 22355679999999999988 578999
Q ss_pred ccchhhhhhhhhhhh
Q psy2833 199 FGSVLGVRGALSLVR 213 (216)
Q Consensus 199 ~~~~~~~~~~~~~~~ 213 (216)
|+..++.+++++|.-
T Consensus 557 dp~~vk~~al~~A~e 571 (590)
T 3p9d_C 557 EPEVIKQQSVKTAIE 571 (590)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred EcHHHHHHHHHHHHH
Confidence 999999999988754
No 22
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.9e-34 Score=272.48 Aligned_cols=182 Identities=24% Similarity=0.292 Sum_probs=164.0
Q ss_pred hhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCCceEEEEEeCCChhhHHHHHHHhchhhHHHHH
Q psy2833 24 VQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNPKACTILLRGASKDLLNETERNLQDALHVARN 100 (216)
Q Consensus 24 ~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~~l~E~ersi~Dal~v~~~ 100 (216)
++....+||++++++++++++ |+|+.|+++++|+++|++|++|+++++|||+|||+|+++++|.||+++||++++++
T Consensus 314 le~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~ 393 (527)
T 3p9d_B 314 VERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQ 393 (527)
T ss_dssp HHHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 555556799999999999886 99999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEecCCchhHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCC
Q psy2833 101 IMLEPKLVPGGGAVEMAVSHVSASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLG 175 (216)
Q Consensus 101 ~~~~~~vV~GGGa~E~~ls~~L~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g 175 (216)
++++|++|||||++|+++|.+|++++ .++.++++|++||+++|++|++|+ |.++.++.. +|+..+ ..+
T Consensus 394 av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~Na---G~d~~~vv~--~l~~~h--~~~ 466 (527)
T 3p9d_B 394 TTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNA---GFDSSELVS--KLRSSI--YNG 466 (527)
T ss_dssp HHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHH---TSCSHHHHH--HHHHHH--HHT
T ss_pred HHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhcc---CCCHHHHHH--HHHHHH--hcC
Confidence 99999999999999999999999986 899999999999999999999999 778888764 233322 234
Q ss_pred ceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhh
Q psy2833 176 RVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVR 213 (216)
Q Consensus 176 ~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~ 213 (216)
..++|+|+.+|++.|| .++||||+..++.+++++|.-
T Consensus 467 ~~~~G~d~~~g~~~dm-~~~gI~dp~~vk~~al~~A~e 503 (527)
T 3p9d_B 467 ISTSGLDLNNGTIADM-RQLGIVESYKLKRAVVSSASE 503 (527)
T ss_dssp CSCCCCCSSSTTCCCH-HHHTCEEETTHHHHHHHHHHH
T ss_pred CCceeEECCCCCCcch-HhccCEEcHHHHHHHHHHHHH
Confidence 5579999999999988 468999999999999988754
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.96 E-value=3.6e-30 Score=244.11 Aligned_cols=194 Identities=13% Similarity=0.044 Sum_probs=163.2
Q ss_pred CcEEEEecCcccc-cccchhhhhhhcCceeeee-----ecccCc---ceeceEEEEEECCeEEEEEeecCCC--------
Q psy2833 7 APVLVLSSNTKRD-SGRKVQLENIQAGKYIDSS-----IVTLNH---WLCSSQDACLLGDEYFCYITECQNP-------- 69 (216)
Q Consensus 7 ~~~~v~~~~~~r~-~~~~~~~~~i~~G~~i~~s-----l~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~-------- 69 (216)
.++++++-...++ ....++...+.||++++++ ++++++ |+|+.|++ +++++++|++|+++
T Consensus 269 ~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~ 345 (543)
T 1we3_A 269 LSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI---TKDETTIVGGKGKKEDIEARIN 345 (543)
T ss_dssp CCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE---CSSCEEEEEECCCHHHHHHHHH
T ss_pred eeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEE---EcCEEEEEcCCCCHHHHHHHHH
Confidence 4566666443322 2333455556699999996 888876 99999976 46899999999864
Q ss_pred ---------------------------ceEEEEEeCCChhhHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHH
Q psy2833 70 ---------------------------KACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVS 122 (216)
Q Consensus 70 ---------------------------~~~TIllrG~t~~~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L 122 (216)
++|||+|||+|+++++|.||+++||+++++++++++ +|||||++|++++.+|
T Consensus 346 ~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L 424 (543)
T 1we3_A 346 GIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAV 424 (543)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHH
T ss_pred HHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHH
Confidence 789999999999999999999999999999999999 9999999999999999
Q ss_pred hhhh-----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcc
Q psy2833 123 ASKD-----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEV 197 (216)
Q Consensus 123 ~~~~-----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi 197 (216)
++++ .++.++++|++||+++|++|++|+ |.++.++.. .|+.. | +..++|+|+.+|++.|+ .+.||
T Consensus 425 ~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~Na---G~d~~~vv~--~l~~~--h--~~~~~G~d~~~g~~~dm-~~~gI 494 (543)
T 1we3_A 425 EELIKKLEGDEATGAKIVRRALEEPARQIAENA---GYEGSVIVQ--QILAE--T--KNPRYGFNAATGEFVDM-VEAGI 494 (543)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHH---TSCHHHHHH--HHHHC--C--SCTTEEEETTTTEEEET-TTTTC
T ss_pred HHHhhccCchHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHH--HHHHh--c--CCCCEEEeCCCCeeccc-ccCCc
Confidence 9986 789999999999999999999999 778888765 34432 1 23569999999999987 58999
Q ss_pred cccchhhhhhhhhhhhh
Q psy2833 198 FFGSVLGVRGALSLVRI 214 (216)
Q Consensus 198 ~~~~~~~~~~~~~~~~~ 214 (216)
||++.++.++++++.-+
T Consensus 495 ~dp~~vk~~al~~A~e~ 511 (543)
T 1we3_A 495 VDPAKVTRSALQNAASI 511 (543)
T ss_dssp EEEHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHH
Confidence 99999999999988643
No 24
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.96 E-value=4.5e-30 Score=243.56 Aligned_cols=173 Identities=14% Similarity=0.052 Sum_probs=152.5
Q ss_pred hhhhhhhcCceeee-----eecccCc---ceeceEEEEEECCeEEEEEeecCCCc-------------------------
Q psy2833 24 VQLENIQAGKYIDS-----SIVTLNH---WLCSSQDACLLGDEYFCYITECQNPK------------------------- 70 (216)
Q Consensus 24 ~~~~~i~~G~~i~~-----sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~~------------------------- 70 (216)
++...++||+++++ +++++++ |+|+.|+ ++++++++|++|++++
T Consensus 287 le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl 363 (546)
T 3rtk_A 287 LQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKL 363 (546)
T ss_dssp HHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred HHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHH
Confidence 33344559999999 6888876 9999997 5889999999998753
Q ss_pred ----------eEEEEEeCCChhhHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh---hhhHHHHHHHH
Q psy2833 71 ----------ACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD---LLNETERNLQD 137 (216)
Q Consensus 71 ----------~~TIllrG~t~~~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~---~~~e~~ra~ad 137 (216)
+|||+|||+|+++++|.||+++||+++++++++++ +|||||++|+++|.+|++++ .++.++++|++
T Consensus 364 ~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~g~eq~~i~~~a~ 442 (546)
T 3rtk_A 364 QERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELKLEGDEATGANIVKV 442 (546)
T ss_dssp HHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSCCCTTHHHHHHHHHH
T ss_pred HHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 89999999999999999999999999999999998 99999999999999999985 99999999999
Q ss_pred HHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhh
Q psy2833 138 ALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLV 212 (216)
Q Consensus 138 AL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~ 212 (216)
||+++|++|++|+ |.++.++.. .|+.. ..+ +|+|+.+|++.|| .++||||+..++.++++++.
T Consensus 443 ALe~ip~~La~Na---G~d~~~vv~--~l~~~---~~~---~G~d~~~g~~~Dm-~~~gI~dp~~vk~~al~~A~ 505 (546)
T 3rtk_A 443 ALEAPLKQIAFNS---GLEPGVVAE--KVRNL---PAG---HGLNAQTGVYEDL-LAAGVADPVKVTRSALQNAA 505 (546)
T ss_dssp HTTHHHHHHHTTT---TCCHHHHHH--HHHHS---CTT---EECCSSSCCCEET-TTTTCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc---CCCHHHHHH--HHHhh---cCC---EeEcCCCCcEeeH-HHcCCEecHHHHHHHHHHHH
Confidence 9999999999999 889888765 34442 122 8999999999988 57999999999999998875
No 25
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.96 E-value=1.3e-29 Score=240.51 Aligned_cols=193 Identities=13% Similarity=0.032 Sum_probs=162.8
Q ss_pred CCcEEEEecCccccc-ccchhhhhhhcCceeeee-----ecccCc---ceeceEEEEEECCeEEEEEeecCCC-------
Q psy2833 6 SAPVLVLSSNTKRDS-GRKVQLENIQAGKYIDSS-----IVTLNH---WLCSSQDACLLGDEYFCYITECQNP------- 69 (216)
Q Consensus 6 ~~~~~v~~~~~~r~~-~~~~~~~~i~~G~~i~~s-----l~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~------- 69 (216)
..++++|+-..-++. ...++...+.||++++++ ++++++ |+|+.|++ +++++++|++|+++
T Consensus 269 ~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~ 345 (547)
T 1kp8_A 269 IVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI---NKDTTTIIDGVGEEAAIQGRV 345 (547)
T ss_dssp SSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE---CSSCEEEEEECCCHHHHHHHH
T ss_pred ceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE---ccceEEEEcCCCCHHHHHHHH
Confidence 345666663333222 333455556699999996 888876 99999977 46899999999875
Q ss_pred ----------------------------ceEEEEEeCCChhhHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHH
Q psy2833 70 ----------------------------KACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHV 121 (216)
Q Consensus 70 ----------------------------~~~TIllrG~t~~~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~ 121 (216)
++|||+|||+|+++++|.||+++||+++++++++++ +|||||++|++++.+
T Consensus 346 ~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~ 424 (547)
T 1kp8_A 346 AQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASK 424 (547)
T ss_dssp HHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHH
T ss_pred HHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHH
Confidence 689999999999999999999999999999999999 999999999999999
Q ss_pred Hhhhh----hhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcc
Q psy2833 122 SASKD----LLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEV 197 (216)
Q Consensus 122 L~~~~----~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi 197 (216)
|++++ ..+.++++|++||+++|++|++|+ |.++.++.. +|+.. ..++|+|+.+|++.|+ .+.||
T Consensus 425 L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~Na---G~d~~~vv~--~l~~~------~~~~G~d~~~g~~~dm-~~~gI 492 (547)
T 1kp8_A 425 LADLRGQNADQNVGIKVALRAMEAPLRQIVLNC---GEEPSVVAN--TVKGG------DGNYGYNAATEEYGNM-IDMGI 492 (547)
T ss_dssp TTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHH---TSCHHHHHH--HHHHS------CTTEEEETTTTEEEET-TTTTC
T ss_pred HHHHhccCchHHHHHHHHHHHHHHHHHHHHHHc---CCCHHHHHH--HHHhc------CCCEeEeCCCCccccc-hhcCc
Confidence 99986 889999999999999999999999 778888765 34322 2469999999999987 58999
Q ss_pred cccchhhhhhhhhhhhh
Q psy2833 198 FFGSVLGVRGALSLVRI 214 (216)
Q Consensus 198 ~~~~~~~~~~~~~~~~~ 214 (216)
||+..++.++++++.-+
T Consensus 493 ~Dp~~vk~~al~~A~~~ 509 (547)
T 1kp8_A 493 LDPTKVTRSALQYAASV 509 (547)
T ss_dssp EEEHHHHHHHHHHHHHH
T ss_pred eechHhHHHHHHHHHHH
Confidence 99999999999988643
No 26
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.96 E-value=3.6e-30 Score=244.27 Aligned_cols=177 Identities=14% Similarity=0.066 Sum_probs=146.6
Q ss_pred chhhhhhhcCceeeee-----ecccCc---ceeceEEEEEECCeEEEEEeecCCC-------------------------
Q psy2833 23 KVQLENIQAGKYIDSS-----IVTLNH---WLCSSQDACLLGDEYFCYITECQNP------------------------- 69 (216)
Q Consensus 23 ~~~~~~i~~G~~i~~s-----l~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~------------------------- 69 (216)
.++...++||++++++ ++++++ |+|+.|++ ++++|+||++|+++
T Consensus 288 ~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ek 364 (545)
T 1iok_A 288 MLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREK 364 (545)
T ss_dssp HHHHHHHHHTC---------------CTTSEEEEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHH
T ss_pred HHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHH
Confidence 3455556699999997 999876 99999987 46899999999865
Q ss_pred ----------ceEEEEEeCCChhhHHHHHHHhchhhHHHHHHhcCCeEEecCCchhHHHHHHHhhhh----hhhHHHHHH
Q psy2833 70 ----------KACTILLRGASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSASKD----LLNETERNL 135 (216)
Q Consensus 70 ----------~~~TIllrG~t~~~l~E~ersi~Dal~v~~~~~~~~~vV~GGGa~E~~ls~~L~~~~----~~~e~~ra~ 135 (216)
++|||+|||+|+++++|.||+++||+++++++++++ +|||||++|++++.+|++++ ..+.++++|
T Consensus 365 l~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~ 443 (545)
T 1iok_A 365 LQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSGANSDQDAGIAII 443 (545)
T ss_dssp HHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHH
T ss_pred HHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhccCchHHHHHHHH
Confidence 689999999999999999999999999999999999 99999999999999999985 889999999
Q ss_pred HHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCCCCCCCCCCcccccchhhhhhhhhhhhh
Q psy2833 136 QDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGGPGLIPGGAEVFFGSVLGVRGALSLVRI 214 (216)
Q Consensus 136 adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~ 214 (216)
++||+++|++|++|+ |.++.++.. .|+.. + ..++|+|+.+|++.|+ .+.||||++.++.++++++.-+
T Consensus 444 a~ALe~ip~~La~Na---G~d~~~vv~--~l~~~--~---~~~~G~d~~~g~~~dm-~~~gI~dp~~vk~~al~~A~~~ 511 (545)
T 1iok_A 444 RRALEAPMRQIAENA---GVDGAVVAG--KVRES--S---DKAFGFNAQTEEYGDM-FKFGVIDPAKVVRTALEDAASV 511 (545)
T ss_dssp HHHTTHHHHHHHHHH---TSCHHHHHH--HHHSC--C---STTEEEETTTTEEEEH-HHHTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc---CCCHHHHHH--HHHhh--c---CCCeeEeCCCCcccch-HhcCcEEccHHHHHHHHHHHHH
Confidence 999999999999999 789888865 33322 1 2469999999999987 5899999999999999988643
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.44 E-value=8e-14 Score=114.61 Aligned_cols=72 Identities=40% Similarity=0.586 Sum_probs=58.5
Q ss_pred CcEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ce-eceEEEEEECCeEEEEEeecCCCceEEEEEeCCChh
Q psy2833 7 APVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WL-CSSQDACLLGDEYFCYITECQNPKACTILLRGASKD 82 (216)
Q Consensus 7 ~~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~-c~~v~~~~ig~~~~~~~~~~~~~~~~TIllrG~t~~ 82 (216)
+.+|++++-.+++..| ...+|||+|+++++++++ |+ |+.|+++++|+++|+||++|+++++|||+|||+|.+
T Consensus 99 ~gI~~vr~v~~~dler----ia~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 99 ANVTAIRRVRKTDNNR----IARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLRGASHH 174 (178)
T ss_dssp TTCEEECCCCHHHHHH----HHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEESSTTSCEEEEEC----
T ss_pred CCCEEEecCCHHHHHH----HHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCCCCCEEEEEEECCCcc
Confidence 3467776665555444 444899999999999986 99 999999999999999999999999999999999975
No 28
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.03 E-value=3.9e-11 Score=113.24 Aligned_cols=81 Identities=30% Similarity=0.421 Sum_probs=74.1
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||+++. .+++.+|+++|||+++++++.++++|||||++|+.+|..|++++.+.+|.+|+++++|+.+
T Consensus 371 lrG~t~~----------~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe 440 (529)
T 3iyg_A 371 LRGANDF----------MCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLL 440 (529)
T ss_pred ECCchHH----------HHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHH
Confidence 6777887 8899999999999999999999999999999999999999999999999999999999994
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 441 ~ip~~La~NaG~-d~~ 455 (529)
T 3iyg_A 441 VIPNTLAVNAAQ-DST 455 (529)
T ss_pred HHHHHHHHHcCC-CHH
Confidence 6778899985 554
No 29
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=98.96 E-value=1.1e-10 Score=109.85 Aligned_cols=81 Identities=38% Similarity=0.514 Sum_probs=73.9
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .++|.+|+++|||+++++++.++++|||||++|+.++..|++++.+.+|.+|+++.+|+.+
T Consensus 364 lrG~t~~----------~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale 433 (515)
T 3iyg_G 364 LRGASKE----------ILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALE 433 (515)
T ss_pred EcCCCHH----------HHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHH
Confidence 6777787 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 434 ~ip~~La~NaG~-d~~ 448 (515)
T 3iyg_G 434 VIPRTLIQNCGA-STI 448 (515)
T ss_pred HHHHHHHHhcCC-CHH
Confidence 6778899995 555
No 30
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=98.95 E-value=8.8e-11 Score=110.62 Aligned_cols=81 Identities=21% Similarity=0.310 Sum_probs=73.3
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccC---
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAG--- 186 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~--- 186 (216)
-||++|. .++|.+|+++|||+++++++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.
T Consensus 368 lrG~t~~----------~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe 437 (517)
T 3iyg_Z 368 IKGPNKH----------TLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALL 437 (517)
T ss_pred ecCCcHH----------HHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 5667777 789999999999999999999999999999999999999999999999999999999998
Q ss_pred -CCCCCCCCCcccccc
Q psy2833 187 -GPGLIPGGAEVFFGS 201 (216)
Q Consensus 187 -~~~~~~~~~gi~~~~ 201 (216)
.|+.+++|+|. |+.
T Consensus 438 ~iP~~La~NaG~-d~~ 452 (517)
T 3iyg_Z 438 IIPKVLAQNSGF-DLQ 452 (517)
T ss_pred HHHHHHHHHcCC-CHH
Confidence 37778999995 544
No 31
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=98.93 E-value=1.6e-10 Score=108.82 Aligned_cols=81 Identities=25% Similarity=0.382 Sum_probs=74.7
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 369 lrG~te~----------~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe 438 (518)
T 3iyg_D 369 VRGSNKL----------VIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAME 438 (518)
T ss_pred ECCCCHH----------HHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Confidence 7788888 7899999999999999999999999999999999999999999999999999999999994
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 439 ~ip~~La~NaG~-d~~ 453 (518)
T 3iyg_D 439 VIPSTLAENAGL-NPI 453 (518)
T ss_pred HHHHHHHHhcCC-CHH
Confidence 6778999996 665
No 32
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=98.92 E-value=1.7e-10 Score=108.56 Aligned_cols=81 Identities=30% Similarity=0.422 Sum_probs=74.1
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||+++++++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 362 lrG~t~~----------~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe 431 (513)
T 3iyg_B 362 LRGATQQ----------ILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALR 431 (513)
T ss_pred ecCCCHH----------HHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHH
Confidence 6788888 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 432 ~ip~~La~NaG~-d~~ 446 (513)
T 3iyg_B 432 MLPTIIADNAGY-DSA 446 (513)
T ss_pred HHHHHHHHhcCC-CHH
Confidence 6668899985 555
No 33
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=98.90 E-value=2.3e-10 Score=107.75 Aligned_cols=81 Identities=28% Similarity=0.450 Sum_probs=73.6
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-+|++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 365 lrG~t~~----------~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe 434 (515)
T 3iyg_H 365 LRGGAEQ----------FMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALE 434 (515)
T ss_pred EeCCcHH----------HHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 5668888 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 435 ~ip~~La~NaG~-d~~ 449 (515)
T 3iyg_H 435 IIPRQLCDNAGF-DAT 449 (515)
T ss_pred HHHHHHHHhcCC-CHH
Confidence 6678899985 554
No 34
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=98.90 E-value=7.3e-10 Score=104.25 Aligned_cols=83 Identities=25% Similarity=0.323 Sum_probs=74.7
Q ss_pred EecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC
Q psy2833 108 VPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG 187 (216)
Q Consensus 108 V~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~ 187 (216)
+.-||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 363 I~lrG~te~----------~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~A 432 (515)
T 3iyg_E 363 IFIRGGNKM----------IIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADA 432 (515)
T ss_pred EEEeCCcHH----------HHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 336778888 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred ----CCCCCCCCcccccc
Q psy2833 188 ----PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 ----~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 433 Le~ip~~La~NaG~-d~~ 449 (515)
T 3iyg_E 433 LEVIPMALAENSGM-NPI 449 (515)
T ss_pred HHHHHHHHHHhCCC-CHH
Confidence 6668899985 554
No 35
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=98.89 E-value=3e-10 Score=106.75 Aligned_cols=83 Identities=20% Similarity=0.394 Sum_probs=75.5
Q ss_pred EecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC
Q psy2833 108 VPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG 187 (216)
Q Consensus 108 V~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~ 187 (216)
+--||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 359 I~lrG~te~----------~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~A 428 (512)
T 3iyg_Q 359 IVLRGSTDN----------LMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEA 428 (512)
T ss_pred EEECCCcHH----------HHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 337888888 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred ----CCCCCCCCcccccc
Q psy2833 188 ----PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 ----~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 429 Le~ip~~La~NaG~-d~~ 445 (512)
T 3iyg_Q 429 FEAIPRALAENSGV-KAN 445 (512)
T ss_pred HHHHHHHHHHhcCC-CHH
Confidence 6678999996 665
No 36
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=98.86 E-value=2.9e-10 Score=107.89 Aligned_cols=81 Identities=26% Similarity=0.398 Sum_probs=73.4
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||+++++++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 378 lrG~te~----------~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe 447 (550)
T 3p9d_G 378 LRGGAEQ----------VIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALE 447 (550)
T ss_dssp BCSSSHH----------HHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHT
T ss_pred EeCCcHH----------HHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Confidence 5677787 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 448 ~ip~~La~NaG~-d~~ 462 (550)
T 3p9d_G 448 VIPRQLCENAGF-DAI 462 (550)
T ss_dssp HHHHHHHHTSCS-CHH
T ss_pred HHHHHHHHhcCC-CHH
Confidence 6667899985 555
No 37
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=98.85 E-value=2.2e-10 Score=108.86 Aligned_cols=81 Identities=30% Similarity=0.392 Sum_probs=73.7
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||+++++++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 387 lrG~te~----------~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe 456 (559)
T 3p9d_A 387 LRGANDY----------SLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALL 456 (559)
T ss_dssp EEESCHH----------HHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHH
T ss_pred EcCCCHH----------HHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHH
Confidence 6777887 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 457 ~ip~~La~NaG~-d~~ 471 (559)
T 3p9d_A 457 IIPKTLAVNAAK-DSS 471 (559)
T ss_dssp HHHHHHHHTSSS-CCH
T ss_pred HHHHHHHHHCCC-CHH
Confidence 6668899984 555
No 38
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=98.85 E-value=2.2e-10 Score=108.98 Aligned_cols=81 Identities=28% Similarity=0.351 Sum_probs=73.3
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||+++++++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 408 lrG~te~----------~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe 477 (562)
T 3p9d_E 408 VRGSNKM----------IVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALD 477 (562)
T ss_dssp EECTTTT----------THHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHT
T ss_pred EeCCCHH----------HHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHH
Confidence 5667887 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 478 ~ip~~La~NaG~-d~~ 492 (562)
T 3p9d_E 478 TIPMTLAENSGL-DPI 492 (562)
T ss_dssp HHHHHHHHTTTS-CHH
T ss_pred HHHHHHHHhcCC-CHH
Confidence 6667899985 555
No 39
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=98.84 E-value=3.6e-10 Score=107.03 Aligned_cols=84 Identities=18% Similarity=0.256 Sum_probs=74.9
Q ss_pred EEecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHH---hhhhcCCceEEEEee
Q psy2833 107 LVPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSC---FQDNLLGRVVVTLGL 183 (216)
Q Consensus 107 vV~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~---~a~~~~g~~~~~i~~ 183 (216)
.+.-||++|. .+++.+|+++|||+++++++.++++|||||++|+.++..|++ |+...+|.+|+++++
T Consensus 377 tI~lrG~te~----------~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~ 446 (546)
T 3p9d_F 377 TILIKGSTHY----------ALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEA 446 (546)
T ss_dssp EEECCCSCHH----------HHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHH
T ss_pred EEEECCCCHH----------HHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHH
Confidence 3347888888 789999999999999999999999999999999999999999 588899999999999
Q ss_pred ccCC----CCCCCCCCcccccc
Q psy2833 184 HAGG----PGLIPGGAEVFFGS 201 (216)
Q Consensus 184 ~~~~----~~~~~~~~gi~~~~ 201 (216)
|+.+ |+.+++|+|. |+.
T Consensus 447 ~a~ALe~ip~~La~NaG~-d~~ 467 (546)
T 3p9d_F 447 FAEALLVIPKTLVKNSGF-DPL 467 (546)
T ss_dssp HHHHHHHHHHHHHTTTCC-TTT
T ss_pred HHHHHHHHHHHHHHHcCC-CHH
Confidence 9994 6778899985 555
No 40
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=98.83 E-value=2.4e-10 Score=107.81 Aligned_cols=81 Identities=31% Similarity=0.412 Sum_probs=74.2
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 369 lrg~te~----------~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe 438 (527)
T 3p9d_B 369 LRGATDQ----------TLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALR 438 (527)
T ss_dssp CCTTCTT----------HHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHH
T ss_pred EcCCCHH----------HHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHH
Confidence 7888888 7899999999999999999999999999999999999999999998999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 439 ~ip~~La~NaG~-d~~ 453 (527)
T 3p9d_B 439 QLPTILADNAGF-DSS 453 (527)
T ss_dssp HHHHHHHHHHTS-CSH
T ss_pred HHHHHHHhccCC-CHH
Confidence 6667889985 555
No 41
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=98.83 E-value=2.2e-10 Score=108.76 Aligned_cols=81 Identities=25% Similarity=0.372 Sum_probs=72.8
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||+++++++.++++|||||++|+.++..|++++.+.+|.+|+++++|+..
T Consensus 383 lrG~te~----------~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe 452 (553)
T 3ko1_A 383 IRGGLER----------LVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALE 452 (553)
T ss_dssp ECCSSTT----------HHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHH
T ss_pred eeccHHH----------HHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHH
Confidence 5777777 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 453 ~ip~~La~NaG~-d~~ 467 (553)
T 3ko1_A 453 SLVSILIENAGF-DPI 467 (553)
T ss_dssp HHHHHHHHHHTS-CHH
T ss_pred hHHHHHHHhcCC-CHH
Confidence 6667888884 444
No 42
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=98.82 E-value=3.1e-10 Score=108.06 Aligned_cols=81 Identities=22% Similarity=0.326 Sum_probs=72.7
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHh--cCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIML--EPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~--~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~ 187 (216)
-||++|. .+++.+|+++|||+++++++. ++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 386 lrG~t~~----------~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~A 455 (568)
T 3p9d_H 386 LRGATQN----------NLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVA 455 (568)
T ss_dssp EEESCHH----------HHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHG
T ss_pred ECCCcHH----------HHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHH
Confidence 5667777 789999999999999999998 8999999999999999999999999999999999999985
Q ss_pred ----CCCCCCCCcccccc
Q psy2833 188 ----PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 ----~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 456 Le~ip~~La~NaG~-d~~ 472 (568)
T 3p9d_H 456 FEVVPRTLAETAGL-DVN 472 (568)
T ss_dssp GGHHHHHHHHHHTC-CHH
T ss_pred HHHHHHHHHHHcCC-CHH
Confidence 5667888885 554
No 43
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=98.82 E-value=2.8e-10 Score=107.80 Aligned_cols=81 Identities=22% Similarity=0.359 Sum_probs=72.8
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||+++++++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 369 lrG~te~----------~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe 438 (543)
T 3ruv_A 369 IRGTTEH----------VIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALE 438 (543)
T ss_dssp EEESSHH----------HHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHT
T ss_pred ecCCCHH----------HHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHH
Confidence 4666777 7899999999999999999999999999999999999999999999999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 439 ~ip~~La~NaG~-d~~ 453 (543)
T 3ruv_A 439 VIPRTLAENAGL-DAI 453 (543)
T ss_dssp HHHHHHHHHTTC-CHH
T ss_pred HHHHHHHHhcCC-CHH
Confidence 6667889985 554
No 44
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=98.81 E-value=2.7e-10 Score=106.90 Aligned_cols=81 Identities=27% Similarity=0.362 Sum_probs=73.5
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 327 lrG~t~~----------~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe 396 (500)
T 3aq1_B 327 LHGGTEH----------VVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALE 396 (500)
T ss_dssp EEESSHH----------HHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTT
T ss_pred ecCCcHH----------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHH
Confidence 6777887 8999999999999999999999999999999999999999999998999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 397 ~ip~~La~NaG~-d~~ 411 (500)
T 3aq1_B 397 VIPVALAENAGL-DPI 411 (500)
T ss_dssp HHHHHHHHHTTC-CHH
T ss_pred HHHHHHHHHcCC-CHH
Confidence 6667889985 554
No 45
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=98.78 E-value=6e-10 Score=106.52 Aligned_cols=84 Identities=39% Similarity=0.419 Sum_probs=74.8
Q ss_pred EEecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccC
Q psy2833 107 LVPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAG 186 (216)
Q Consensus 107 vV~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~ 186 (216)
.+--||++|. .++|.+|+++|||++++.++.++.+|||||++|+.++..|++++...+|.+|+++++|+.
T Consensus 434 tI~lrg~te~----------~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ 503 (590)
T 3p9d_C 434 TIMLRGGSKD----------ILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVAD 503 (590)
T ss_dssp CEEEECSSTT----------THHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHH
T ss_pred EEEEcCCCHH----------HHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHH
Confidence 3346678888 789999999999999999999999999999999999999999999999999999999998
Q ss_pred C----CCCCCCCCcccccc
Q psy2833 187 G----PGLIPGGAEVFFGS 201 (216)
Q Consensus 187 ~----~~~~~~~~gi~~~~ 201 (216)
+ |+.+++|+|. |+.
T Consensus 504 ALe~ip~~La~NaG~-d~~ 521 (590)
T 3p9d_C 504 AMECIPRTLIQNAGG-DPI 521 (590)
T ss_dssp HTTHHHHHHHHTTCS-CHH
T ss_pred HHHHHHHHHHHHcCC-CHH
Confidence 4 5667889995 655
No 46
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=98.78 E-value=3.7e-10 Score=106.90 Aligned_cols=81 Identities=22% Similarity=0.367 Sum_probs=73.2
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 374 lrG~t~~----------~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe 443 (543)
T 1a6d_B 374 VRGETEH----------VVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIE 443 (543)
T ss_dssp EEESSHH----------HHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHT
T ss_pred ecCCCHH----------HHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHH
Confidence 6677777 8999999999999999999999999999999999999999999998999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 444 ~ip~~La~NaG~-d~~ 458 (543)
T 1a6d_B 444 EIPRALAENAGL-DPI 458 (543)
T ss_dssp HHHHHHHHHHTC-CHH
T ss_pred HHHHHHHHHcCC-ChH
Confidence 6667888885 554
No 47
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=98.75 E-value=4.3e-10 Score=106.14 Aligned_cols=84 Identities=32% Similarity=0.372 Sum_probs=74.5
Q ss_pred EEecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccC
Q psy2833 107 LVPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAG 186 (216)
Q Consensus 107 vV~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~ 186 (216)
.+.-||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.
T Consensus 376 tI~lrG~te~----------~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ 445 (528)
T 3p9d_D 376 SVVIRGANNM----------IIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFAS 445 (528)
T ss_dssp EEECCCSSTT----------HHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHH
T ss_pred EEEEcCCCHH----------HHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHH
Confidence 3337777777 789999999999999999999999999999999999999999998899999999999998
Q ss_pred C----CCCCCCCCcccccc
Q psy2833 187 G----PGLIPGGAEVFFGS 201 (216)
Q Consensus 187 ~----~~~~~~~~gi~~~~ 201 (216)
+ |+.+++|+|. |+.
T Consensus 446 ALe~ip~~La~NaG~-d~~ 463 (528)
T 3p9d_D 446 ALEVIPTTLAENAGL-NSI 463 (528)
T ss_dssp HHTHHHHHHHHTTSS-CHH
T ss_pred HHHHHHHHHHHHcCC-CHH
Confidence 4 6667889984 554
No 48
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=98.75 E-value=4.7e-10 Score=106.36 Aligned_cols=81 Identities=23% Similarity=0.400 Sum_probs=73.2
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++.+.+|.+|+++++|+.+
T Consensus 376 lrG~te~----------~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe 445 (548)
T 1q3q_A 376 IRGGTEH----------VIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALK 445 (548)
T ss_dssp EEESSHH----------HHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTT
T ss_pred ECCCChH----------HHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHH
Confidence 6677777 8999999999999999999999999999999999999999999988899999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 446 ~ip~~La~NaG~-d~~ 460 (548)
T 1q3q_A 446 IIPKTLAENAGL-DTV 460 (548)
T ss_dssp HHHHHHHHHTTC-CHH
T ss_pred HHHHHHHHHcCC-CHH
Confidence 6667889986 554
No 49
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=98.74 E-value=4.8e-10 Score=106.22 Aligned_cols=81 Identities=25% Similarity=0.331 Sum_probs=73.5
Q ss_pred cCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccCC--
Q psy2833 110 GGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAGG-- 187 (216)
Q Consensus 110 GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~~-- 187 (216)
-||++|. .+++.+|+++|||++++.++.++++|||||++|+.++..|++++...++.+|+++++|+.+
T Consensus 373 lrG~te~----------~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe 442 (545)
T 1a6d_A 373 IRGGTDH----------VVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALE 442 (545)
T ss_dssp ECCSSST----------THHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHT
T ss_pred EcCCCHH----------HHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHH
Confidence 6777888 8999999999999999999999999999999999999999999998999999999999984
Q ss_pred --CCCCCCCCcccccc
Q psy2833 188 --PGLIPGGAEVFFGS 201 (216)
Q Consensus 188 --~~~~~~~~gi~~~~ 201 (216)
|+.+++|+|. |+.
T Consensus 443 ~ip~~La~NaG~-d~~ 457 (545)
T 1a6d_A 443 IIPRTLAENAGI-DPI 457 (545)
T ss_dssp HHHHHHHHHHTS-CHH
T ss_pred HHHHHHHHHcCC-CHH
Confidence 6667888885 554
No 50
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=98.64 E-value=5.6e-09 Score=98.93 Aligned_cols=83 Identities=25% Similarity=0.323 Sum_probs=73.8
Q ss_pred EEecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccC
Q psy2833 107 LVPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAG 186 (216)
Q Consensus 107 vV~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~ 186 (216)
.+.-||++|. .++|.+|+++|||++++.++.++ +|||||++|+.++..|++++.+.+|.+|+++++|+.
T Consensus 376 tI~lrG~te~----------~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ 444 (543)
T 1we3_A 376 VIRVGAATET----------ELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRR 444 (543)
T ss_dssp EEEECCSSHH----------HHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred EEEeCCCCHH----------HHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Confidence 4448999999 78999999999999999999987 999999999999999999998889999999999998
Q ss_pred C----CCCCCCCCcccccc
Q psy2833 187 G----PGLIPGGAEVFFGS 201 (216)
Q Consensus 187 ~----~~~~~~~~gi~~~~ 201 (216)
. |+.+++|+|. |+.
T Consensus 445 ALe~ip~~La~NaG~-d~~ 462 (543)
T 1we3_A 445 ALEEPARQIAENAGY-EGS 462 (543)
T ss_dssp HTTHHHHHHHHHHTS-CHH
T ss_pred HHHHHHHHHHHHCCC-CHH
Confidence 4 5557888884 555
No 51
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=98.57 E-value=3.5e-09 Score=100.40 Aligned_cols=81 Identities=20% Similarity=0.256 Sum_probs=72.0
Q ss_pred EEecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccC
Q psy2833 107 LVPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAG 186 (216)
Q Consensus 107 vV~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~ 186 (216)
++.-||++|. .++|.+|+++|||+++++++.++ +|||||++|+.++..|++++ .+|.+|+++++|+.
T Consensus 376 tI~vrG~te~----------~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~~i~~~a~ 442 (546)
T 3rtk_A 376 VIKAGAATEV----------ELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEATGANIVKV 442 (546)
T ss_dssp EEECCCCSST----------HHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHHHHHHHHH
T ss_pred EEEeCCCCHH----------HHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHHHHHHHHH
Confidence 4558899999 78999999999999999999887 99999999999999999988 79999999999998
Q ss_pred C----CCCCCCCCcccccc
Q psy2833 187 G----PGLIPGGAEVFFGS 201 (216)
Q Consensus 187 ~----~~~~~~~~gi~~~~ 201 (216)
. |+.+++|+|. |+.
T Consensus 443 ALe~ip~~La~NaG~-d~~ 460 (546)
T 3rtk_A 443 ALEAPLKQIAFNSGL-EPG 460 (546)
T ss_dssp HTTHHHHHHHTTTTC-CHH
T ss_pred HHHHHHHHHHHHcCC-CHH
Confidence 4 6667899985 554
No 52
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=98.56 E-value=4.1e-08 Score=79.10 Aligned_cols=59 Identities=15% Similarity=0.260 Sum_probs=47.5
Q ss_pred CcEEEEecCcccccccchhhhhhhcCceeeeeecccCc---ceeceEEEEEECCeEEEEEeecCCC
Q psy2833 7 APVLVLSSNTKRDSGRKVQLENIQAGKYIDSSIVTLNH---WLCSSQDACLLGDEYFCYITECQNP 69 (216)
Q Consensus 7 ~~~~v~~~~~~r~~~~~~~~~~i~~G~~i~~sl~~~~~---g~c~~v~~~~ig~~~~~~~~~~~~~ 69 (216)
+.+|++++-.+++..| ...+|||+|+++++++++ |+|+.|+++++|+++|+||++|++.
T Consensus 93 ~gI~~v~~v~~~dler----ia~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 93 EGIYAVRRVKKSDMEK----LAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp TTCEEECSCCHHHHHH----HHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC--
T ss_pred CCCEEEccCCHHHHHH----HHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCCc
Confidence 3467776665555444 444899999999999986 9999999999999999999999864
No 53
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=98.55 E-value=7.9e-09 Score=97.97 Aligned_cols=82 Identities=22% Similarity=0.281 Sum_probs=71.8
Q ss_pred EEecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeeccC
Q psy2833 107 LVPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHAG 186 (216)
Q Consensus 107 vV~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~~ 186 (216)
.+.-||++|. .+++.+|+++|||++++.++.++ +|||||++|+.++..|++++. .++.+|+++++|+.
T Consensus 378 tI~lrG~te~----------~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ 445 (545)
T 1iok_A 378 VIRVGGMTEI----------EVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDAGIAIIRR 445 (545)
T ss_dssp EEEECCSSHH----------HHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHHHHHHHHH
T ss_pred EEEeCCCCHH----------HHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHHHHHHHHH
Confidence 4448899999 78999999999999999999988 999999999999999999987 78999999999998
Q ss_pred C----CCCCCCCCcccccc
Q psy2833 187 G----PGLIPGGAEVFFGS 201 (216)
Q Consensus 187 ~----~~~~~~~~gi~~~~ 201 (216)
. |+.+++|+|. |+.
T Consensus 446 ALe~ip~~La~NaG~-d~~ 463 (545)
T 1iok_A 446 ALEAPMRQIAENAGV-DGA 463 (545)
T ss_dssp HTTHHHHHHHHHHTS-CHH
T ss_pred HHHHHHHHHHHHcCC-CHH
Confidence 4 5557778885 444
No 54
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=98.53 E-value=1e-08 Score=97.31 Aligned_cols=83 Identities=22% Similarity=0.227 Sum_probs=72.6
Q ss_pred eEEecCCchhHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHhcCcccCCCChhHHHHHHHHHHhhhhcCCceEEEEeecc
Q psy2833 106 KLVPGGGAVEMAVSHVSASKDLLNETERNLQDALHVARNIMLEPKLVPGGGAVEMAVSHVSSCFQDNLLGRVVVTLGLHA 185 (216)
Q Consensus 106 ~vV~GGGa~E~~ls~~L~~~~~~~e~~ra~adAL~vIp~~L~~N~~v~Ggga~E~~~s~~L~~~a~~~~g~~~~~i~~~~ 185 (216)
..+.-||++|. .+++.+|+++|||++++.++.++ +|||||++|+.++..|++++. .++.+|+++++|+
T Consensus 376 ~tI~vrG~te~----------~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a 443 (547)
T 1kp8_A 376 AVIKVGAATEV----------EMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNVGIKVAL 443 (547)
T ss_dssp EEEECCCSSHH----------HHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHHHHHHHH
T ss_pred EEEEEcCCcHh----------HHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHHHHHHHH
Confidence 35558999999 78999999999999999999988 999999999999999999987 7889999999999
Q ss_pred CC----CCCCCCCCcccccc
Q psy2833 186 GG----PGLIPGGAEVFFGS 201 (216)
Q Consensus 186 ~~----~~~~~~~~gi~~~~ 201 (216)
.. |+.+++|+|. |+.
T Consensus 444 ~ALe~ip~~la~NaG~-d~~ 462 (547)
T 1kp8_A 444 RAMEAPLRQIVLNCGE-EPS 462 (547)
T ss_dssp HHTTHHHHHHHHHHTS-CHH
T ss_pred HHHHHHHHHHHHHcCC-CHH
Confidence 84 5557888884 554
Done!