BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2834
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P80318|TCPG_MOUSE T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1
Length = 545
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 52/64 (81%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQNQ 126
T+G+NGETG LVDMK LGIWEPL VKLQ YKTAVETA+LLLRIDDIVSG KKK D+ Q
Sbjct: 477 TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQ 536
Query: 127 AAQP 130
P
Sbjct: 537 TGAP 540
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI-NGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAIL 105
KSMIEI+RTQDEEVGDG T+ I GE + + P TV + Y+ A
Sbjct: 77 AKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHP-TVVISAYRMA------ 129
Query: 106 LLRIDDIVSGSKK 118
+DD++S KK
Sbjct: 130 ---LDDMISTLKK 139
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 MELDDIVSGSKKKKDENQNQAAQP 24
+ +DDIVSG KKK D+ Q P
Sbjct: 517 LRIDDIVSGHKKKGDDQNRQTGAP 540
>sp|Q3T0K2|TCPG_BOVIN T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=1 SV=1
Length = 545
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 52/64 (81%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQNQ 126
T+G+NGETG LVDMK LGIWEPL VKLQ YKTAVETA+LLLRIDDIVSG KKK D+ Q
Sbjct: 477 TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQ 536
Query: 127 AAQP 130
P
Sbjct: 537 GGAP 540
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI-NGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAIL 105
KSMIEI+RTQDEEVGDG T+ I GE + + P TV + Y+ A
Sbjct: 77 AKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHP-TVVISAYRKA------ 129
Query: 106 LLRIDDIVSGSKK 118
+DD++S KK
Sbjct: 130 ---LDDMISTLKK 139
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 MELDDIVSGSKKKKDENQNQAAQP 24
+ +DDIVSG KKK D+ Q P
Sbjct: 517 LRIDDIVSGHKKKGDDQSRQGGAP 540
>sp|Q5NVF9|TCPG_PONAB T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1
Length = 545
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 52/64 (81%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQNQ 126
T+G+NGETG LVDMK LGIWEPL VKLQ YKTAVETA+LLLRIDDIVSG KKK D+ Q
Sbjct: 477 TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQ 536
Query: 127 AAQP 130
P
Sbjct: 537 GGAP 540
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI-NGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAIL 105
KSM+EI+RTQDEEVGDG T+ I GE + + P TV + Y+ A
Sbjct: 77 AKSMVEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHP-TVVISAYRKA------ 129
Query: 106 LLRIDDIVSGSKK 118
+DD++S KK
Sbjct: 130 ---LDDMISTLKK 139
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 MELDDIVSGSKKKKDENQNQAAQP 24
+ +DDIVSG KKK D+ Q P
Sbjct: 517 LRIDDIVSGHKKKGDDQSRQGGAP 540
>sp|P49368|TCPG_HUMAN T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4
Length = 545
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 52/64 (81%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQNQ 126
T+G+NGETG LVDMK LGIWEPL VKLQ YKTAVETA+LLLRIDDIVSG KKK D+ Q
Sbjct: 477 TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQ 536
Query: 127 AAQP 130
P
Sbjct: 537 GGAP 540
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI-NGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAIL 105
KSMIEI+RTQDEEVGDG T+ I GE + + P TV + Y+ A
Sbjct: 77 AKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHP-TVVISAYRKA------ 129
Query: 106 LLRIDDIVSGSKK 118
+DD++S KK
Sbjct: 130 ---LDDMISTLKK 139
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 MELDDIVSGSKKKKDENQNQAAQP 24
+ +DDIVSG KKK D+ Q P
Sbjct: 517 LRIDDIVSGHKKKGDDQSRQGGAP 540
>sp|Q6P502|TCPG_RAT T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1
SV=1
Length = 545
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 52/64 (81%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQNQ 126
T+G+NGETG LVDMK LGIWEPL VKLQ YKTAVETA+LLLRIDDIVSG KKK D+ Q
Sbjct: 477 TWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQ 536
Query: 127 AAQP 130
P
Sbjct: 537 TGAP 540
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 11/73 (15%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI-NGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAIL 105
KSMIEI+RTQDEEVGDG T+ I GE + + P TV + Y+ A
Sbjct: 77 AKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHP-TVVISAYRMA------ 129
Query: 106 LLRIDDIVSGSKK 118
+DD+VS KK
Sbjct: 130 ---LDDMVSTLKK 139
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 MELDDIVSGSKKKKDENQNQAAQP 24
+ +DDIVSG KKK D+ Q P
Sbjct: 517 LRIDDIVSGHKKKGDDQNRQTGAP 540
>sp|Q4R963|TCPG_MACFA T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3
PE=2 SV=1
Length = 545
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 52/64 (81%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQNQ 126
T+G+NGETG LVD+K LGIWEPL VKLQ YKTAVETA+LLLRIDDIVSG KKK D+ Q
Sbjct: 477 TWGVNGETGTLVDVKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQ 536
Query: 127 AAQP 130
P
Sbjct: 537 GGAP 540
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI-NGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAIL 105
KSMIEI+RTQDEEVG G T+ I GE + + P TV + Y+ A
Sbjct: 77 AKSMIEISRTQDEEVGGGTTSVIILAGEMLSVAEHFLEQQMHP-TVVISAYRKA------ 129
Query: 106 LLRIDDIVSGSKK 118
+DD++S KK
Sbjct: 130 ---LDDMISTLKK 139
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 1 MELDDIVSGSKKKKDENQNQAAQP 24
+ +DDIVSG KKK D+ Q P
Sbjct: 517 LRIDDIVSGHKKKGDDQSRQGGAP 540
>sp|P48605|TCPG_DROME T-complex protein 1 subunit gamma OS=Drosophila melanogaster
GN=Cctgamma PE=2 SV=2
Length = 544
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Query: 42 AGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVE 101
G T +++ + GDG +GI+GE+G++VDM IWEPL VKLQ YKTAVE
Sbjct: 451 CGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVE 510
Query: 102 TAILLLRIDDIVSGSKKK-KDENQNQAA 128
TAILLLRIDDIVSGSKK+ +E N AA
Sbjct: 511 TAILLLRIDDIVSGSKKRGGNEPTNPAA 538
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 16/63 (25%)
Query: 47 GKSMIEIARTQDEEVGDGETT-FGINGETGDLVDMKTLGIWEPL-------TVKLQVYKT 98
KSMIEIARTQDEEVGDG T+ + GE L EP TV ++ Y+
Sbjct: 78 AKSMIEIARTQDEEVGDGTTSVIVLAGE--------MLAAAEPFLQQQIHPTVIIRAYRE 129
Query: 99 AVE 101
A+E
Sbjct: 130 ALE 132
>sp|P50143|TCPG_XENLA T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2
SV=2
Length = 547
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 46 TGKSMIEIART-QDEEVGDGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAI 104
G S I I + + + +G T+G++GE G L DMK LGIWEPL VKLQ YKTAVETAI
Sbjct: 454 CGASTIRILTSLRAKHTQEGCQTWGVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAI 513
Query: 105 LLLRIDDIVSGSKKKKDEN 123
LLLRIDDIVSG KKK +++
Sbjct: 514 LLLRIDDIVSGHKKKGEDH 532
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 20/24 (83%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI 70
KSMIEI+RTQDEEVGDG T+ I
Sbjct: 76 AKSMIEISRTQDEEVGDGTTSVII 99
>sp|O74341|TCPG_SCHPO T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cct3 PE=1 SV=1
Length = 528
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 46/60 (76%)
Query: 62 GDGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKD 121
+G+ +FGI+GETG +VDM G+WEP VKLQ KTA+E+A LLLR+DDIVSG +K +
Sbjct: 469 AEGQHSFGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSGVRKHSE 528
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 12/71 (16%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI-NGE----TGDLVDMKTLGIWEPLTVKLQVYKTAVE 101
KSMIE+ARTQDEEVGDG T+ I GE L+D K P+ V ++ +K A+E
Sbjct: 75 AKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKI----HPV-VMIRSFKQALE 129
Query: 102 TAILLLRIDDI 112
A+ + ID+I
Sbjct: 130 DALSI--IDEI 138
>sp|Q9LKI7|TCPG_THAWE T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2
SV=1
Length = 558
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 49/64 (76%), Gaps = 3/64 (4%)
Query: 59 EEVGDG---ETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSG 115
E G+G + +GI+G TG LVDM+ G+WEP +VK+Q KTAVE+A ++LRIDDIVSG
Sbjct: 493 ETSGNGTFPKCNWGIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSG 552
Query: 116 SKKK 119
SKKK
Sbjct: 553 SKKK 556
Score = 35.4 bits (80), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 46 TGKSMIEIARTQDEEVGDGETTFGI 70
T KSMIE++R DEEVGDG T+ I
Sbjct: 78 TAKSMIELSRAHDEEVGDGTTSVII 102
>sp|P54408|TCPG_TETPY T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3
SV=1
Length = 559
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 43/58 (74%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKK 120
+G GI G +G + DM +WEP+ VKLQVYKTA+E+A +LLRIDD+VSG KK+K
Sbjct: 476 EGNKFIGIEGNSGKITDMGEANVWEPIAVKLQVYKTAIESACMLLRIDDVVSGLKKQK 533
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 19/24 (79%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI 70
KSMIE+AR QDEEVGDG T+ I
Sbjct: 79 AKSMIELARVQDEEVGDGTTSVII 102
>sp|P39077|TCPG_YEAST T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CCT3 PE=1 SV=2
Length = 534
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 64 GETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKK 119
G T GI+G+ G +VDM + GIWEP +K Q KTA+E+A LLLR+DDIVSG +K+
Sbjct: 478 GNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQ 533
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI 70
KSM+E++RTQDEEVGDG TT I
Sbjct: 75 AKSMLELSRTQDEEVGDGTTTVII 98
>sp|O00782|TCPG_OXYGR T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3
SV=1
Length = 559
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKK 120
+GI+G TG + DM+ +W+P++VK Q KT++E +LLRIDDIVSG KK K
Sbjct: 481 WGIDGNTGKIRDMRESNVWDPISVKQQTLKTSIEATCMLLRIDDIVSGIKKDK 533
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 19/24 (79%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI 70
KSMIE+AR QDEEVGDG T+ I
Sbjct: 77 AKSMIELARAQDEEVGDGTTSVII 100
>sp|Q54TH8|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum
GN=cct3 PE=1 SV=1
Length = 530
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKK 119
T+G++G+ G +VDMK LGIW+ +VK+Q KTA+E+A +LR+D I S + K+
Sbjct: 478 TYGVDGDNGTIVDMKQLGIWDTHSVKVQTLKTAIESACTMLRVDHIASAASKQ 530
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 18/24 (75%)
Query: 47 GKSMIEIARTQDEEVGDGETTFGI 70
KSMIE++R QDE VGDG T+ I
Sbjct: 75 AKSMIELSRAQDENVGDGTTSVVI 98
>sp|O28045|THSA_ARCFU Thermosome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsA PE=3 SV=1
Length = 545
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%), Gaps = 4/66 (6%)
Query: 50 MIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRI 109
++E+ + +E G+TT+G++ +G++ MK G+ EPL VK Q +A E AI++LRI
Sbjct: 463 LVELRKAHEE----GKTTYGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRI 518
Query: 110 DDIVSG 115
DD+++
Sbjct: 519 DDVIAA 524
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 17/21 (80%)
Query: 47 GKSMIEIARTQDEEVGDGETT 67
K +IE+A+TQD EVGDG TT
Sbjct: 79 AKMIIEVAKTQDNEVGDGTTT 99
>sp|O28821|THSB_ARCFU Thermosome subunit beta OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=thsB PE=3 SV=1
Length = 545
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 64 GETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSG 115
G+ G++ +TG +VDMK G++EPL VK Q +A E A+++LRIDDI++
Sbjct: 473 GQKYAGVDVDTGKVVDMKERGVFEPLRVKTQAIGSATEVAVMILRIDDIIAA 524
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K +IE+A+TQD EVGDG TT
Sbjct: 78 AAKMIIEVAKTQDNEVGDGTTT 99
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 64 GETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVS 114
G+T G++ GD++DM++ GI EPL VK Q ++A E A ++LRIDD+++
Sbjct: 470 GDTEAGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVIA 520
>sp|Q9YA66|THSB_AERPE Thermosome subunit beta OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=thsB PE=3
SV=2
Length = 548
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSG 115
+G++ +TG++VDM + G+ EP+ VKL K A E A L+LRIDD+++
Sbjct: 485 YGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVIAA 532
>sp|O30561|THS1_HALVD Thermosome subunit 1 OS=Haloferax volcanii (strain ATCC 29605 / DSM
3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 /
DS2) GN=cct1 PE=1 SV=1
Length = 560
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 64 GETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVS 114
GE G++ TG+++DM+ G+ EPL VK Q ++A E A+++LRIDD+++
Sbjct: 471 GEFAAGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVIA 521
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
Query: 50 MIEIARTQDEEVGDGETTFGINGETGDLVD 79
++E++ TQ++EVGDG TT IN G+L+D
Sbjct: 84 IVEVSETQEDEVGDGTTTAVIN--AGELLD 111
>sp|Q9V2T4|THSB_SULAC Thermosome subunit beta OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsB PE=3 SV=2
Length = 553
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKK 118
GIN TG + DM +LG+ EP VK+ K A E + L+LRIDD++S KK
Sbjct: 485 HGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISAGKK 535
>sp|P48425|THSB_THEAC Thermosome subunit beta OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsB PE=1 SV=1
Length = 543
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 41 AAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAV 100
A + G I+I E G T+GIN TG++ DM G+ EP+ V Q ++A
Sbjct: 448 ALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESAT 507
Query: 101 ETAILLLRIDDIVS 114
E AI++LRIDD+++
Sbjct: 508 EAAIMILRIDDVIA 521
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 47 GKSMIEIARTQDEEVGDGETT 67
K M+E+++TQD VGDG TT
Sbjct: 77 AKMMVEVSKTQDSFVGDGTTT 97
>sp|Q9V2T8|THSB_SULSO Thermosome subunit beta OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=thsB PE=3 SV=2
Length = 554
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122
+G+N TG+ DM LG+ EP VK+ K A E L+LRIDDIV+ KK E
Sbjct: 484 YGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIVAAGKKSGSE 538
>sp|P50016|THS_METKA Thermosome subunit OS=Methanopyrus kandleri (strain AV19 / DSM 6324
/ JCM 9639 / NBRC 100938) GN=ths PE=3 SV=1
Length = 545
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKK 120
DG+ T GI+ GD+ DM G+ EPL VK Q +A E A ++LRIDD+++ + K
Sbjct: 474 DGQVTAGIDVYDGDVKDMLEEGVVEPLRVKTQALASATEAAEMILRIDDVIAARELSK 531
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K ++E+A+TQ++EVGDG TT
Sbjct: 80 AAKMVVEVAKTQEDEVGDGTTT 101
>sp|P28488|THSB_SULSH Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1
Length = 552
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKK 118
+G+N TG+ DM LG+ EP VK+ K A E L+LRIDDIV+ KK
Sbjct: 484 YGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIVAAGKK 534
>sp|O24735|THSB_SULTO Thermosome subunit beta OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsB PE=1 SV=1
Length = 552
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSG 115
+GIN TG + DM LG+ EP VK+ K A E A L+LRIDD+++
Sbjct: 485 YGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIAA 532
>sp|Q58405|THS_METJA Thermosome subunit OS=Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=ths PE=3 SV=1
Length = 542
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSK 117
+G +G++ G++VDM G+ EPL VK Q +A E +++LLRIDD+++ K
Sbjct: 470 EGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEK 524
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K +IE+A+TQ++EVGDG TT
Sbjct: 77 AAKMLIEVAKTQEKEVGDGTTT 98
>sp|Q53546|THS_DESSY Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3
SV=1
Length = 545
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKD 121
T G++ G+ DM G+ PL V Q K+A E AI++LRIDD+++ SK +KD
Sbjct: 476 TIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASKLEKD 530
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K M+E+A+TQD+E GDG TT
Sbjct: 78 AAKMMVEVAKTQDKEAGDGTTT 99
>sp|Q9V2Q7|THS_PYRAB Thermosome subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ths
PE=3 SV=1
Length = 550
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSK 117
T GI+ G+ DM G+ EP+ VK Q K+A E AI++LRIDD+++ K
Sbjct: 476 TIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAAQK 526
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K M+E+A+TQD+E GDG TT
Sbjct: 78 AAKMMVEVAKTQDKEAGDGTTT 99
>sp|O24730|THSB_THEK1 Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB
PE=3 SV=2
Length = 546
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKD 121
T G++ G+ DM G+ P+ V Q K+A E AI++LRIDD+++ SK +KD
Sbjct: 476 TIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKD 530
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K M+E+A+TQD+E GDG TT
Sbjct: 78 AAKMMVEVAKTQDKEAGDGTTT 99
>sp|Q52500|THSB_PYRKO Thermosome subunit beta OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsB PE=3 SV=1
Length = 546
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKD 121
T G++ G+ DM G+ P+ V Q K+A E AI++LRIDD+++ SK +KD
Sbjct: 476 TIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKD 530
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K M+E+A+TQD+E GDG TT
Sbjct: 78 AAKMMVEVAKTQDKEAGDGTTT 99
>sp|Q3ZBH0|TCPB_BOVIN T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=1 SV=3
Length = 535
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122
+G+TT G++ + G + DM LGI E VK QV +A E A ++LR+D+I+ + +K+
Sbjct: 471 EGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
Query: 123 NQN 125
+ +
Sbjct: 531 DHH 533
>sp|O93624|THS_METTL Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths
PE=1 SV=1
Length = 544
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSK 117
+G+N TGD+ +M G+ EPL VK Q ++A E +LLRIDD+++ K
Sbjct: 473 YGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIAAEK 522
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 47 GKSMIEIARTQDEEVGDGETT 67
K +IE+A+TQ++EVGDG TT
Sbjct: 77 AKMLIEVAKTQEKEVGDGTTT 97
>sp|O57762|THS_PYRHO Thermosome subunit OS=Pyrococcus horikoshii (strain ATCC 700860 /
DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ths PE=3
SV=1
Length = 549
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSG 115
T GI+ G+ DM G+ EP+ VK Q K+A E AI++LRIDD+++
Sbjct: 476 TIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAA 524
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K M+E+A+TQD+E GDG TT
Sbjct: 78 AAKMMVEVAKTQDKEAGDGTTT 99
>sp|Q8SR76|TCPG_ENCCU T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CCT3 PE=1 SV=1
Length = 519
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 66 TTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSK 117
+ +G+NG TG++VD + L + EP VK Q K+AVE LLRID I+ +
Sbjct: 469 SFYGVNGTTGEIVDTRDL-VLEPYAVKSQCIKSAVEAVSQLLRIDGIIESKR 519
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 20/22 (90%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
+ +S+IE+A+TQD+EVGDG T+
Sbjct: 74 SARSLIELAKTQDDEVGDGTTS 95
>sp|Q4R6F8|TCPB_MACFA T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2
PE=2 SV=3
Length = 535
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122
+G TT G++ G + DM LGI E VK QV +A E A ++LR+D+I+ + +K+
Sbjct: 471 EGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
Query: 123 NQN 125
+ +
Sbjct: 531 DHH 533
>sp|P78371|TCPB_HUMAN T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4
Length = 535
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122
+G TT G++ G + DM LGI E VK QV +A E A ++LR+D+I+ + +K+
Sbjct: 471 EGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
Query: 123 NQN 125
+ +
Sbjct: 531 DHH 533
>sp|P48424|THSA_THEAC Thermosome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=thsA PE=1 SV=1
Length = 545
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 64 GETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSK 117
G + G++ + + DMK G+ +PL VK ++AVE A ++LRIDD+++ K
Sbjct: 470 GRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKK 523
>sp|O26885|THSB_METTH Thermosome subunit beta OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsB PE=3 SV=1
Length = 538
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 66 TTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSG 115
T GI+ G +VDMK G+ EP VK Q ++A E A ++LRIDD+++
Sbjct: 467 TYMGIDVFDGKIVDMKEAGVIEPHRVKKQAIQSAAEAAEMILRIDDVIAA 516
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K ++E+A+TQ++EVGDG TT
Sbjct: 77 AAKMLVEVAKTQEDEVGDGTTT 98
>sp|P61112|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA
PE=1 SV=1
Length = 548
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKK 119
GI+ G DM GI EPL VK Q K+A E AI++LRIDD+++ K
Sbjct: 477 IGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATK 528
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K M+E+A+TQD+E GDG TT
Sbjct: 78 AAKMMVEVAKTQDKEAGDGTTT 99
>sp|P61111|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1
Length = 548
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKK 119
GI+ G DM GI EPL VK Q K+A E AI++LRIDD+++ K
Sbjct: 477 IGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATK 528
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K M+E+A+TQD+E GDG TT
Sbjct: 78 AAKMMVEVAKTQDKEAGDGTTT 99
>sp|Q5XIM9|TCPB_RAT T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1
SV=3
Length = 535
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122
+G T G++ + G + DM LGI E VK QV +A E A ++LR+D+I+ + +K+
Sbjct: 471 EGRITAGLDMKEGSIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
Query: 123 NQN 125
+ +
Sbjct: 531 DHH 533
>sp|P80314|TCPB_MOUSE T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4
Length = 535
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122
+G T G++ + G + DM LGI E VK QV +A E A ++LR+D+I+ + +K+
Sbjct: 471 EGHITAGLDMKEGTIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVP 530
Query: 123 NQN 125
+ +
Sbjct: 531 DHH 533
>sp|Q9V2T5|THSA_SULAC Thermosome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=thsA PE=3 SV=2
Length = 558
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 69 GINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGS 116
+NG+ D DM + + EP+ VK QV K+AVE A +L+IDD+V+ S
Sbjct: 487 AVNGKIAD--DMMKINVIEPVRVKSQVLKSAVEAATAILKIDDLVAAS 532
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 70 INGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGS 116
+NG+ D DM L + EP+ VK QV K+AVE A +L+IDD+++ +
Sbjct: 488 MNGKIAD--DMLALNVLEPVRVKAQVLKSAVEAATAILKIDDLIAAA 532
>sp|O26320|THSA_METTH Thermosome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=thsA PE=3 SV=2
Length = 542
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSG 115
GI+ G++VDMK G+ EP VK Q ++A E A ++LRIDD+++
Sbjct: 469 MGIDVFDGNIVDMKEAGVIEPQRVKKQAIQSAAEAAEMILRIDDMIAA 516
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K ++E+A+TQ++EVGDG TT
Sbjct: 77 AAKMLVEVAKTQEDEVGDGTTT 98
>sp|Q10147|TCPB_SCHPO Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=cct2 PE=3 SV=1
Length = 527
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 63 DGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKD 121
DG T G++ + G++ DM+ GI E L +K V + E A LLLR+D I+ + + ++
Sbjct: 467 DGNDTMGLDMDEGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRVDTILKAAPRPRE 525
>sp|O24732|THSB_THEK8 Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB
PE=3 SV=1
Length = 545
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 67 TFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKD 121
T G++ G+ DM G+ P+ V Q K+A + AI++LRIDD+++ SK +KD
Sbjct: 476 TIGVDVFEGEPADMLERGVIAPVRVPKQAIKSA-KAAIMILRIDDVIAASKLEKD 529
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 46 TGKSMIEIARTQDEEVGDGETT 67
K M+E+A+TQD+E GDG TT
Sbjct: 78 AAKMMVEVAKTQDKEAGDGTTT 99
>sp|P47207|TCPB_CAEEL T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2
PE=1 SV=2
Length = 529
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 60 EVGDGETTFGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKK 119
E +G GI+ E G++ D+ LG+ E VKL + +A E +LR+DDI+ + +
Sbjct: 462 EHANGRHNMGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKAAPRA 521
Query: 120 KDEN 123
+ ++
Sbjct: 522 RAQD 525
>sp|Q94757|TCPA_SCHMA T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A
PE=2 SV=1
Length = 545
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQ 124
+G++ + D K +G++EPL K++ K A E AI +LRIDD++ K K+E Q
Sbjct: 483 WGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLI----KLKEEKQ 535
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 46 TGKSMIEIARTQDEEVGDGETTFGI 70
K ++++A+ QDEEVGDG T+ I
Sbjct: 68 AAKILVQLAQLQDEEVGDGTTSVVI 92
>sp|Q4R5G2|TCPA_MACFA T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1
PE=2 SV=1
Length = 556
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 68 FGINGETGDLVDMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQ 124
G++ G D K G++EP VK++ K A E AI +LRIDD++ + KD+
Sbjct: 486 IGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDDKH 542
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.305 0.126 0.333
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,370,394
Number of Sequences: 539616
Number of extensions: 2040580
Number of successful extensions: 4481
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 3712
Number of HSP's gapped (non-prelim): 831
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 55 (25.8 bits)