Query psy2834
Match_columns 137
No_of_seqs 128 out of 1268
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 18:06:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2834.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2834hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iyg_A T-complex protein 1 sub 99.9 8.9E-26 3.1E-30 195.9 11.3 104 14-117 415-529 (529)
2 3p9d_H T-complex protein 1 sub 99.9 2E-27 6.8E-32 207.9 -1.0 120 14-133 432-567 (568)
3 1a6d_B Thermosome (beta subuni 99.9 9.2E-26 3.1E-30 196.4 8.6 121 14-134 418-541 (543)
4 3ko1_A Chaperonin; 9-fold symm 99.9 8.4E-26 2.9E-30 197.2 6.3 115 14-128 427-545 (553)
5 3iyg_Z T-complex protein 1 sub 99.9 4.8E-25 1.7E-29 191.0 10.9 103 14-116 412-517 (517)
6 3aq1_B Thermosome subunit; gro 99.9 4.2E-25 1.5E-29 190.6 9.9 110 14-123 371-483 (500)
7 3p9d_G T-complex protein 1 sub 99.9 4E-25 1.4E-29 192.8 9.2 111 14-124 422-535 (550)
8 3ruv_A Chaperonin, CPN; double 99.9 4E-25 1.4E-29 192.5 9.2 109 14-122 413-525 (543)
9 3iyg_B T-complex protein 1 sub 99.9 9.8E-25 3.3E-29 188.8 11.3 105 14-118 406-513 (513)
10 3iyg_H T-complex protein 1 sub 99.9 1.1E-24 3.8E-29 188.6 11.1 103 14-116 409-514 (515)
11 3iyg_D T-complex protein 1 sub 99.9 1.1E-24 3.9E-29 188.6 10.2 103 14-116 413-518 (518)
12 3p9d_A T-complex protein 1 sub 99.9 1E-24 3.5E-29 190.5 10.0 109 14-122 431-554 (559)
13 3iyg_G T-complex protein 1 sub 99.9 1.8E-24 6.2E-29 187.2 10.6 103 14-116 408-514 (515)
14 3p9d_B T-complex protein 1 sub 99.9 3.2E-25 1.1E-29 192.3 5.7 109 14-122 413-524 (527)
15 3iyg_Q T-complex protein 1 sub 99.9 3.6E-24 1.2E-28 185.1 11.1 103 14-116 405-512 (512)
16 3p9d_F T-complex protein 1 sub 99.9 1E-24 3.5E-29 189.9 5.9 109 14-122 424-543 (546)
17 3iyg_E T-complex protein 1 sub 99.9 9E-24 3.1E-28 182.7 11.2 102 14-115 409-514 (515)
18 3p9d_E T-complex protein 1 sub 99.9 3.7E-24 1.3E-28 187.1 8.7 106 14-119 452-561 (562)
19 1a6d_A Thermosome (alpha subun 99.9 4.4E-24 1.5E-28 186.0 8.9 106 14-119 417-525 (545)
20 3p9d_D T-complex protein 1 sub 99.9 1.7E-24 5.7E-29 188.0 5.0 103 14-116 423-528 (528)
21 1q3q_A Thermosome alpha subuni 99.9 3.2E-24 1.1E-28 186.9 6.7 108 14-121 420-530 (548)
22 3p9d_C T-complex protein 1 sub 99.9 7.4E-24 2.5E-28 186.4 8.3 105 14-118 481-588 (590)
23 1we3_A CPN60(groel); chaperoni 99.9 4.2E-23 1.4E-27 179.9 7.1 109 14-124 422-533 (543)
24 3rtk_A 60 kDa chaperonin 2; he 99.9 1.8E-22 6.2E-27 176.2 7.0 104 15-124 423-529 (546)
25 1iok_A Chaperonin 60; chaperon 99.8 6.7E-22 2.3E-26 172.5 4.9 103 15-121 425-530 (545)
26 1kp8_A Groel protein; chaperon 99.8 2.6E-21 8.8E-26 168.9 5.3 100 16-120 425-527 (547)
27 1we3_A CPN60(groel); chaperoni 93.7 0.027 9.3E-07 48.9 2.3 59 46-108 69-131 (543)
28 3iyg_G T-complex protein 1 sub 93.7 0.027 9.4E-07 48.4 2.3 60 45-108 63-126 (515)
29 3iyg_A T-complex protein 1 sub 93.2 0.038 1.3E-06 47.6 2.4 60 45-108 64-127 (529)
30 3iyg_B T-complex protein 1 sub 93.1 0.044 1.5E-06 47.1 2.6 60 45-108 66-129 (513)
31 1kp8_A Groel protein; chaperon 93.0 0.04 1.4E-06 47.9 2.3 59 46-108 69-131 (547)
32 3iyg_D T-complex protein 1 sub 93.0 0.048 1.7E-06 46.9 2.7 59 46-108 66-128 (518)
33 3iyg_Z T-complex protein 1 sub 93.0 0.051 1.7E-06 46.8 2.8 59 46-108 65-127 (517)
34 3p9d_E T-complex protein 1 sub 92.6 0.063 2.1E-06 46.7 2.8 59 46-108 100-162 (562)
35 3iyg_Q T-complex protein 1 sub 92.5 0.049 1.7E-06 46.7 2.1 59 46-108 66-128 (512)
36 3p9d_D T-complex protein 1 sub 92.4 0.068 2.3E-06 46.1 2.9 59 46-108 74-136 (528)
37 3iyg_E T-complex protein 1 sub 92.2 0.055 1.9E-06 46.4 2.0 59 46-108 65-127 (515)
38 3p9d_B T-complex protein 1 sub 92.1 0.077 2.6E-06 45.7 2.8 59 46-108 73-136 (527)
39 3p9d_F T-complex protein 1 sub 91.8 0.059 2E-06 46.6 1.8 59 46-108 72-134 (546)
40 3p9d_A T-complex protein 1 sub 91.8 0.066 2.2E-06 46.5 2.0 59 46-108 79-141 (559)
41 3iyg_H T-complex protein 1 sub 91.7 0.048 1.6E-06 46.9 1.0 59 46-108 66-128 (515)
42 1q3q_A Thermosome alpha subuni 91.6 0.071 2.4E-06 46.2 2.0 59 46-108 78-140 (548)
43 3ruv_A Chaperonin, CPN; double 91.4 0.076 2.6E-06 45.9 2.0 59 46-108 74-136 (543)
44 3aq1_B Thermosome subunit; gro 90.8 0.039 1.3E-06 47.2 -0.4 63 42-108 24-90 (500)
45 3p9d_H T-complex protein 1 sub 90.2 0.072 2.5E-06 46.4 0.8 59 46-108 81-143 (568)
46 3p9d_G T-complex protein 1 sub 90.2 0.062 2.1E-06 46.6 0.4 59 46-108 79-141 (550)
47 3rtk_A 60 kDa chaperonin 2; he 89.5 0.057 1.9E-06 47.0 -0.4 58 47-108 70-131 (546)
48 3p9d_C T-complex protein 1 sub 89.3 0.073 2.5E-06 46.7 0.1 59 46-108 74-137 (590)
49 3ko1_A Chaperonin; 9-fold symm 87.2 0.066 2.3E-06 46.5 -1.6 59 46-108 85-147 (553)
50 1iok_A Chaperonin 60; chaperon 86.4 0.11 3.9E-06 45.0 -0.5 59 46-108 70-132 (545)
51 1a6d_B Thermosome (beta subuni 85.5 0.059 2E-06 46.6 -2.7 59 46-108 76-138 (543)
52 1a6d_A Thermosome (alpha subun 81.9 0.074 2.5E-06 46.0 -3.6 59 46-108 77-139 (545)
53 3oa1_A Phosphoprotein; seattle 59.5 4.1 0.00014 31.6 1.9 45 1-45 164-212 (229)
54 2wzl_A Phosphoprotein; viral p 42.5 11 0.00037 30.3 1.9 45 1-45 233-281 (303)
55 1vyi_A RNA polymerase alpha su 34.2 25 0.00085 24.1 2.4 39 1-39 47-86 (112)
56 2dk5_A DNA-directed RNA polyme 25.6 68 0.0023 20.8 3.4 57 8-64 3-64 (91)
57 1iqv_A Ribosomal protein S7; R 21.6 1.1E+02 0.0036 23.6 4.2 33 23-59 96-131 (218)
No 1
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.93 E-value=8.9e-26 Score=195.92 Aligned_cols=104 Identities=21% Similarity=0.236 Sum_probs=98.6
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCC--------ceeeeeccCcchhhhhh
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGE--------TTFGINGETGDLVDMKT 82 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~--------~~~GVdl~~g~i~d~~e 82 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+|+..|..|+ .++|+|+.+|++.||.+
T Consensus 415 ~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~ 494 (529)
T 3iyg_A 415 IYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQ 494 (529)
T ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhh
Confidence 467889999999999999999 99999 99999999999999999999998765 67999999999999999
Q ss_pred hCccccHHHHHHHHHHHHHHHHHHhchhhhhcCCc
Q psy2834 83 LGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSK 117 (137)
Q Consensus 83 ~gV~dP~~vK~~~i~~Ate~A~~ILrID~iI~~~~ 117 (137)
.|||||+.||.++|++|+|+|++|||||+||+.+|
T Consensus 495 ~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 495 AGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred ccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 99999999999999999999999999999998853
No 2
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.92 E-value=2e-27 Score=207.94 Aligned_cols=120 Identities=16% Similarity=0.140 Sum_probs=88.4
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhC--------CCceeeeeccCcc---hhh
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGD--------GETTFGINGETGD---LVD 79 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~--------G~~~~GVdl~~g~---i~d 79 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+|+..|.. |+.++|+|+.+|+ +.|
T Consensus 432 ~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d 511 (568)
T 3p9d_H 432 SRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKD 511 (568)
T ss_dssp HHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHH
T ss_pred HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccC
Confidence 467889999999999999999 99999 999999999999999999999875 6678999999997 999
Q ss_pred hhhhCccccHHHHHHHHHHHHHHHHHHhchhhhhcCCcCCCCCCCC-C-CCCCChh
Q psy2834 80 MKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQN-Q-AAQPTEE 133 (137)
Q Consensus 80 ~~e~gV~dP~~vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~~~~-~-~~~~~~~ 133 (137)
|.+.|||||+.||+++|++|+|+|++|||||++|.++|.+++.+|. | ..+||+|
T Consensus 512 ~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~~~~~~~~~~~~ 567 (568)
T 3p9d_H 512 IREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAPQGPRPGNWDQE 567 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEECBCCC-----------------------------
T ss_pred hHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999998888663 2 3488876
No 3
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.92 E-value=9.2e-26 Score=196.36 Aligned_cols=121 Identities=27% Similarity=0.369 Sum_probs=97.5
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| ||++| ++||+|||+|+++++.+++..|.+|+.++|+|+.+|++.||.+.|||||+.
T Consensus 418 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 497 (543)
T 1a6d_B 418 FRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIR 497 (543)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHH
T ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHH
Confidence 457889999999999999999 99999 999999999999999999999988877899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcCCCCCCCCCCCCCChhh
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQNQAAQPTEES 134 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~~~~~~~~~~~~~ 134 (137)
||.++|++|+++|++||+||++|...|.+++++|+.+..||+.+
T Consensus 498 vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~~~~~~~~~ 541 (543)
T 1a6d_B 498 VGKQAIESATEAAIMILRIDDVIATKSSSSSSNPPKSGSSSESS 541 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHEEEEEC--------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCccccc
Confidence 99999999999999999999999999988888777777887643
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.92 E-value=8.4e-26 Score=197.24 Aligned_cols=115 Identities=29% Similarity=0.343 Sum_probs=98.0
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCC-ceeeeeccCcchhhhhhhCccccH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGE-TTFGINGETGDLVDMKTLGIWEPL 89 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~-~~~GVdl~~g~i~d~~e~gV~dP~ 89 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|..|+ .++|+|+.+|++.||.+.|||||+
T Consensus 427 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 506 (553)
T 3ko1_A 427 KKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPA 506 (553)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEET
T ss_pred HHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchh
Confidence 457889999999999999999 99999 99999999999999999999998876 689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhcCCcCCCCCCCCCCC
Q psy2834 90 TVKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQNQAA 128 (137)
Q Consensus 90 ~vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~~~~~~~ 128 (137)
.||+++|++|+++|++|||||++|..+|.++++.+.++.
T Consensus 507 ~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~~~~~ 545 (553)
T 3ko1_A 507 LVKMNAIKAATEAATLVLRIDDVVSAGKKSGGESKTPGG 545 (553)
T ss_dssp THHHHHHHHHHHHHHHHHHEEEECCC-------------
T ss_pred hhhhhhhhhcchhheEEEehHHHHHhhhhccCCCCCCCc
Confidence 999999999999999999999999999988777555554
No 5
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.92 E-value=4.8e-25 Score=190.97 Aligned_cols=103 Identities=17% Similarity=0.222 Sum_probs=98.4
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+|+..|..|+.++|+|+.+|++.||.+.|||||+.
T Consensus 412 ~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 491 (517)
T 3iyg_Z 412 EALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYC 491 (517)
T ss_pred HHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHH
Confidence 457889999999999999999 99998 999999999999999999999988888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGS 116 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~ 116 (137)
||.++|++|+++|++|||||+||+++
T Consensus 492 vk~~al~~A~e~a~~iL~iD~ii~~~ 517 (517)
T 3iyg_Z 492 VKKQLLHSCTVIATNILLVDEIMRAG 517 (517)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999999864
No 6
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.92 E-value=4.2e-25 Score=190.57 Aligned_cols=110 Identities=27% Similarity=0.351 Sum_probs=92.6
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| ||++| ++||+|||+|+++++.+++..|.+|+.++|+|+.+|++.||.+.|||||+.
T Consensus 371 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 450 (500)
T 3aq1_B 371 LRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLR 450 (500)
T ss_dssp HHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHH
T ss_pred HHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHH
Confidence 457889999999999999999 99999 999999999999999999999988877899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcCCCCCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKKKKDEN 123 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~~ 123 (137)
||.++|++|+++|++||+||++|...|.+++++
T Consensus 451 vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~~ 483 (500)
T 3aq1_B 451 IKTQAINAAMEATVMILRIDDVVASKGSANQGM 483 (500)
T ss_dssp HHHHHHHHHHHHHHHHHCC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCC
Confidence 999999999999999999999999988766543
No 7
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.91 E-value=4e-25 Score=192.81 Aligned_cols=111 Identities=22% Similarity=0.256 Sum_probs=101.5
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|..|+.++|+|+.+|++.||.+.|||||+.
T Consensus 422 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 501 (550)
T 3p9d_G 422 KCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPAL 501 (550)
T ss_dssp HHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHH
T ss_pred HHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHH
Confidence 467889999999999999999 99999 999999999999999999999987777899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcCCCCCCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQ 124 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~~~ 124 (137)
||+++|++|+++|++||+||++|..+|.++.+.+
T Consensus 502 vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~~ 535 (550)
T 3p9d_G 502 VKINALNSATEATNLILSVDETITNKGSESANAG 535 (550)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEECCCCCC-----
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhCCCcccccCC
Confidence 9999999999999999999999999887766543
No 8
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.91 E-value=4e-25 Score=192.45 Aligned_cols=109 Identities=28% Similarity=0.347 Sum_probs=99.2
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhh-CCCceeeeeccCcchhhhhhhCccccH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVG-DGETTFGINGETGDLVDMKTLGIWEPL 89 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~-~G~~~~GVdl~~g~i~d~~e~gV~dP~ 89 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|. .|+.++|+|+.+|++.||.+.|||||+
T Consensus 413 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~ 492 (543)
T 3ruv_A 413 MKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPL 492 (543)
T ss_dssp HHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEH
T ss_pred HHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecH
Confidence 457889999999999999999 99999 99999999999999999999997 777789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhcCCcCCCCC
Q psy2834 90 TVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122 (137)
Q Consensus 90 ~vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~ 122 (137)
.||+++|++|+++|++|||||++|..+|.++++
T Consensus 493 ~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~ 525 (543)
T 3ruv_A 493 RVKTQAIQSAAESTEMLLRIDDVIAAEKLRGAP 525 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEC------
T ss_pred HHHHHHHHHHHHHHHHHHhHHhheecCccCCCC
Confidence 999999999999999999999999998876553
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.91 E-value=9.8e-25 Score=188.81 Aligned_cols=105 Identities=27% Similarity=0.364 Sum_probs=100.2
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|..|+.++|+|+.+|++.||.+.|||||+.
T Consensus 406 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 485 (513)
T 3iyg_B 406 HAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQ 485 (513)
T ss_pred HHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHH
Confidence 457889999999999999999 99999 999999999999999999999998888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKK 118 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~ 118 (137)
||+++|++|+++|++|||||++|.++|+
T Consensus 486 vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 486 VKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998753
No 10
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.91 E-value=1.1e-24 Score=188.65 Aligned_cols=103 Identities=20% Similarity=0.283 Sum_probs=98.7
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|..|+.++|+|+.+|++.||.+.|||||+.
T Consensus 409 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 488 (515)
T 3iyg_H 409 KYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAM 488 (515)
T ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHH
Confidence 457889999999999999999 99999 999999999999999999999988878899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGS 116 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~ 116 (137)
||+++|++|+++|++|||||+||+++
T Consensus 489 vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 489 VRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999864
No 11
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.91 E-value=1.1e-24 Score=188.60 Aligned_cols=103 Identities=22% Similarity=0.264 Sum_probs=98.6
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+|+..|..|+.++|+|+.+|++.||.+.|||||+.
T Consensus 413 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 492 (518)
T 3iyg_D 413 LRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLL 492 (518)
T ss_pred HHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHH
Confidence 457889999999999999999 99999 999999999999999999999988888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGS 116 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~ 116 (137)
||+++|++|+++|++|||||+||+++
T Consensus 493 vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 493 VSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred HHHHHHHHHHHHHHHHHhhcceEecC
Confidence 99999999999999999999999864
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.91 E-value=1e-24 Score=190.53 Aligned_cols=109 Identities=19% Similarity=0.241 Sum_probs=101.8
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCc------------eeeeeccCcchh
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGET------------TFGINGETGDLV 78 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~------------~~GVdl~~g~i~ 78 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+|+..|..|+. ++|+|+.+|++.
T Consensus 431 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~ 510 (559)
T 3p9d_A 431 IYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIV 510 (559)
T ss_dssp HHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEE
T ss_pred HHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEe
Confidence 467889999999999999999 99999 999999999999999999999987765 789999999999
Q ss_pred hhhhhCccccHHHHHHHHHHHHHHHHHHhchhhhhcCCcCCCCC
Q psy2834 79 DMKTLGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122 (137)
Q Consensus 79 d~~e~gV~dP~~vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~ 122 (137)
||.+.|||||+.||+++|++|+++|++|||||++|.+.|.++.+
T Consensus 511 dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 554 (559)
T 3p9d_A 511 DEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPKE 554 (559)
T ss_dssp ESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCCC
T ss_pred ehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccccc
Confidence 99999999999999999999999999999999999998766533
No 13
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.91 E-value=1.8e-24 Score=187.22 Aligned_cols=103 Identities=50% Similarity=0.692 Sum_probs=96.8
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCC-CceeeeeccCcchhhhhhhCccccH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDG-ETTFGINGETGDLVDMKTLGIWEPL 89 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G-~~~~GVdl~~g~i~d~~e~gV~dP~ 89 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+|+..|..+ +.++|+|+.+|++.||.+.|||||+
T Consensus 408 ~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~ 487 (515)
T 3iyg_G 408 HALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPL 487 (515)
T ss_pred HHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcH
Confidence 457889999999999999999 99999 9999999999999999999999754 4578999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhcCC
Q psy2834 90 TVKLQVYKTAVETAILLLRIDDIVSGS 116 (137)
Q Consensus 90 ~vK~~~i~~Ate~A~~ILrID~iI~~~ 116 (137)
.||+++|++|+++|++|||||+||...
T Consensus 488 ~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 488 AVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 999999999999999999999999753
No 14
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.91 E-value=3.2e-25 Score=192.27 Aligned_cols=109 Identities=23% Similarity=0.334 Sum_probs=99.1
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|..|+.++|+|+.+|++.||.+.|||||+.
T Consensus 413 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 492 (527)
T 3p9d_B 413 KAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYK 492 (527)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETT
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHH
Confidence 457888999999999999999 99999 999999999999999999999988877899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcCCCCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~ 122 (137)
||+++|++|+++|++|||||++|..+|.++.+
T Consensus 493 vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 493 LKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 99999999999999999999999998776544
No 15
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.91 E-value=3.6e-24 Score=185.13 Aligned_cols=103 Identities=22% Similarity=0.282 Sum_probs=97.7
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCc--chhhhhhhCcccc
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETG--DLVDMKTLGIWEP 88 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g--~i~d~~e~gV~dP 88 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|..|+.++|+|+.+| ++.||.+.|||||
T Consensus 405 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp 484 (512)
T 3iyg_Q 405 KQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDT 484 (512)
T ss_pred HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEc
Confidence 457889999999999999999 99999 999999999999999999999988888899999965 9999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhchhhhhcCC
Q psy2834 89 LTVKLQVYKTAVETAILLLRIDDIVSGS 116 (137)
Q Consensus 89 ~~vK~~~i~~Ate~A~~ILrID~iI~~~ 116 (137)
+.||+++|++|+++|++|||||+||+++
T Consensus 485 ~~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 485 YLGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 9999999999999999999999999864
No 16
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.90 E-value=1e-24 Score=189.90 Aligned_cols=109 Identities=18% Similarity=0.228 Sum_probs=100.2
Q ss_pred hhHHH---HhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhC-----CCceeeeeccCcchhhhhh
Q psy2834 14 KDENQ---NQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGD-----GETTFGINGETGDLVDMKT 82 (137)
Q Consensus 14 ~~~~~---~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~-----G~~~~GVdl~~g~i~d~~e 82 (137)
+-|.+ ++.+++|++|+++++| |||+| ++||+|||+|+++++.+|+..|.. ++.++|+|+.+|++.||.+
T Consensus 424 ~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~ 503 (546)
T 3p9d_F 424 RYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTI 503 (546)
T ss_dssp HHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGG
T ss_pred HHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHh
Confidence 34666 5889999999999999 99999 999999999999999999999873 4467899999999999999
Q ss_pred hCccccHHHHHHHHHHHHHHHHHHhchhhhhcCCcCCCCC
Q psy2834 83 LGIWEPLTVKLQVYKTAVETAILLLRIDDIVSGSKKKKDE 122 (137)
Q Consensus 83 ~gV~dP~~vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~ 122 (137)
.|||||+.||+++|++|+++|++|||||+||++++.++.+
T Consensus 504 ~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~~ 543 (546)
T 3p9d_F 504 EGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLKE 543 (546)
T ss_dssp GTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCCC
T ss_pred ccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999999999998776655
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.90 E-value=9e-24 Score=182.74 Aligned_cols=102 Identities=25% Similarity=0.223 Sum_probs=96.8
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhC-CCceeeeeccCcchhhhhhhCccccH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGD-GETTFGINGETGDLVDMKTLGIWEPL 89 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~-G~~~~GVdl~~g~i~d~~e~gV~dP~ 89 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|.. ++.++|+|+.+|++.||.+.|||||+
T Consensus 409 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 488 (515)
T 3iyg_E 409 LAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETL 488 (515)
T ss_pred HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcH
Confidence 457889999999999999999 99999 999999999999999999999975 55689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhcC
Q psy2834 90 TVKLQVYKTAVETAILLLRIDDIVSG 115 (137)
Q Consensus 90 ~vK~~~i~~Ate~A~~ILrID~iI~~ 115 (137)
.||+++|++|+++|++|||||+||++
T Consensus 489 ~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 489 IGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 99999999999999999999999986
No 18
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.90 E-value=3.7e-24 Score=187.10 Aligned_cols=106 Identities=19% Similarity=0.180 Sum_probs=98.4
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhC-CCceeeeeccCcchhhhhhhCccccH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGD-GETTFGINGETGDLVDMKTLGIWEPL 89 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~-G~~~~GVdl~~g~i~d~~e~gV~dP~ 89 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|.. ++.++|+|+.+|++.||.+.|||||+
T Consensus 452 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~ 531 (562)
T 3p9d_E 452 LAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPF 531 (562)
T ss_dssp HHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEH
T ss_pred HHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcH
Confidence 457889999999999999999 99999 999999999999999999999974 55679999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhchhhhhcCCcCC
Q psy2834 90 TVKLQVYKTAVETAILLLRIDDIVSGSKKK 119 (137)
Q Consensus 90 ~vK~~~i~~Ate~A~~ILrID~iI~~~~~~ 119 (137)
.||+++|++|+++|++|||||++|++++.+
T Consensus 532 ~vk~~al~~A~e~a~~iL~iD~ii~~~~~~ 561 (562)
T 3p9d_E 532 IGKKQQILLATQLCRMILKIDNVIISGKDE 561 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTEEEEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 999999999999999999999999987653
No 19
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.90 E-value=4.4e-24 Score=185.97 Aligned_cols=106 Identities=25% Similarity=0.341 Sum_probs=96.5
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|.+|+.++|+|+.+|++.||.+.|||||+.
T Consensus 417 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 496 (545)
T 1a6d_A 417 MRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLR 496 (545)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHH
T ss_pred HHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHH
Confidence 457889999999999999999 99999 999999999999999999999988877899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKKK 119 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~~ 119 (137)
||.++|++|+++|++||+||++|...|.+
T Consensus 497 vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 497 VKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 99999999999999999999999997765
No 20
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.89 E-value=1.7e-24 Score=188.02 Aligned_cols=103 Identities=19% Similarity=0.196 Sum_probs=98.1
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|..|+.++|+|+.+|++.||.+.|||||+.
T Consensus 423 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 502 (528)
T 3p9d_D 423 RRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVL 502 (528)
T ss_dssp HHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHH
T ss_pred HHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHH
Confidence 457788889999999999999 99999 999999999999999999999988888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGS 116 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~ 116 (137)
||+++|++|+++|++|||||+||+++
T Consensus 503 vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 503 VSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred HHHHHHHHHHHHHHHHHhhhHheecC
Confidence 99999999999999999999999864
No 21
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.89 E-value=3.2e-24 Score=186.92 Aligned_cols=108 Identities=27% Similarity=0.309 Sum_probs=99.3
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|.+|+.++|+|+.+|++.||.+.|||||+.
T Consensus 420 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~ 499 (548)
T 1q3q_A 420 IRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLR 499 (548)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHH
T ss_pred HHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHH
Confidence 457888988999999999999 99999 999999999999999999999987777899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcCCCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKKKKD 121 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~ 121 (137)
||.++|++|+++|++||+||++|...|.+.+
T Consensus 500 vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~ 530 (548)
T 1q3q_A 500 VKKQAIKSASEAAIMILRIDDVIAAKATKPE 530 (548)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 9999999999999999999999999876543
No 22
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.89 E-value=7.4e-24 Score=186.36 Aligned_cols=105 Identities=36% Similarity=0.538 Sum_probs=99.7
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+.|.+++.+++|++|+++++| |||+| ++||+|||+|+++++.+++..|..|+.++|+|+.+|++.||.+.|||||+.
T Consensus 481 ~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~ 560 (590)
T 3p9d_C 481 VKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEV 560 (590)
T ss_dssp HHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHH
T ss_pred HHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHH
Confidence 457889999999999999999 99999 999999999999999999999988888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKK 118 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~ 118 (137)
||+++|++|+++|++||+||++|...|.
T Consensus 561 vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 561 IKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp HHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999988764
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.88 E-value=4.2e-23 Score=179.94 Aligned_cols=109 Identities=23% Similarity=0.310 Sum_probs=97.8
Q ss_pred hhHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHH
Q psy2834 14 KDENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLT 90 (137)
Q Consensus 14 ~~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~ 90 (137)
+-|.+++.+++|.+|+++++| ||++| ++||+|||+|+.+++.+++..|+ +.++|+|+.+|++.||.+.|||||+.
T Consensus 422 ~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~--~~~~G~d~~~g~~~dm~~~gI~dp~~ 499 (543)
T 1we3_A 422 SAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETK--NPRYGFNAATGEFVDMVEAGIVDPAK 499 (543)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS--CTTEEEETTTTEEEETTTTTCEEEHH
T ss_pred HHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC--CCCEEEeCCCCeecccccCCcCccHH
Confidence 457788888999999999999 99999 99999999999999999998874 45689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhhhcCCcCCCCCCC
Q psy2834 91 VKLQVYKTAVETAILLLRIDDIVSGSKKKKDENQ 124 (137)
Q Consensus 91 vK~~~i~~Ate~A~~ILrID~iI~~~~~~~~~~~ 124 (137)
||.++|++|+++|++||+||++|...|.+.+.+|
T Consensus 500 vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~ 533 (543)
T 1we3_A 500 VTRSALQNAASIGALILTTEAVVAEKPEKKESTP 533 (543)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEECSCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccCCCCC
Confidence 9999999999999999999999999887655444
No 24
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.86 E-value=1.8e-22 Score=176.23 Aligned_cols=104 Identities=21% Similarity=0.274 Sum_probs=82.9
Q ss_pred hHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHHH
Q psy2834 15 DENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLTV 91 (137)
Q Consensus 15 ~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~v 91 (137)
-|.+++ ++|++|+++++| |||+| ++||+|||+|+.+++.+++.. ..+ +|+|+.+|++.||.+.|||||+.|
T Consensus 423 ~L~~~~--~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~---~G~d~~~g~~~Dm~~~gI~dp~~v 496 (546)
T 3rtk_A 423 TLDELK--LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAG---HGLNAQTGVYEDLLAAGVADPVKV 496 (546)
T ss_dssp GSTTSC--CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTT---EECCSSSCCCEETTTTTCEEEHHH
T ss_pred HHHHhc--cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCC---EeEcCCCCcEeeHHHcCCEecHHH
Confidence 344555 799999999999 99999 999999999999999999874 222 799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchhhhhcCCcCCCCCCC
Q psy2834 92 KLQVYKTAVETAILLLRIDDIVSGSKKKKDENQ 124 (137)
Q Consensus 92 K~~~i~~Ate~A~~ILrID~iI~~~~~~~~~~~ 124 (137)
|.++|++|+++|++||+||++|..+|.+++.+|
T Consensus 497 k~~al~~A~e~A~~iL~id~iI~~~~~~~~~~~ 529 (546)
T 3rtk_A 497 TRSALQNAASIAGLFLTTEAVVADKPEKEKASV 529 (546)
T ss_dssp HHHHHHHHHHHHHHHHHCC--------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999999999999999988776543
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.84 E-value=6.7e-22 Score=172.49 Aligned_cols=103 Identities=18% Similarity=0.273 Sum_probs=91.7
Q ss_pred hHHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHHH
Q psy2834 15 DENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLTV 91 (137)
Q Consensus 15 ~~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~v 91 (137)
-|.+++. ++|++|+++++| ||++| ++||+|||+|+.+++.+++..| +.++|+|+.+|++.||.+.|||||+.|
T Consensus 425 ~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~---~~~~G~d~~~g~~~dm~~~gI~dp~~v 500 (545)
T 1iok_A 425 VLEGLSG-ANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS---DKAFGFNAQTEEYGDMFKFGVIDPAKV 500 (545)
T ss_dssp GGGSCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC---STTEEEETTTTEEEEHHHHTCEEEHHH
T ss_pred HHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCeeEeCCCCcccchHhcCcEEccHH
Confidence 3555655 789999999999 99999 9999999999999999999765 356899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchhhhhcCCcCCCC
Q psy2834 92 KLQVYKTAVETAILLLRIDDIVSGSKKKKD 121 (137)
Q Consensus 92 K~~~i~~Ate~A~~ILrID~iI~~~~~~~~ 121 (137)
|.++|+.|+++|++||+||++|...|.+.+
T Consensus 501 k~~al~~A~~~A~~iL~id~iI~~~~~~~~ 530 (545)
T 1iok_A 501 VRTALEDAASVAGLLITTEAMIAEKPEPKA 530 (545)
T ss_dssp HHHHHHHHHHHHHHHHTEEEEEEECC----
T ss_pred HHHHHHHHHHHHHHHHhHHHhhccCCccCC
Confidence 999999999999999999999999876543
No 26
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.83 E-value=2.6e-21 Score=168.91 Aligned_cols=100 Identities=18% Similarity=0.240 Sum_probs=90.6
Q ss_pred HHHHhhcCCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhhhhCccccHHHH
Q psy2834 16 ENQNQAAQPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMKTLGIWEPLTVK 92 (137)
Q Consensus 16 ~~~~a~~~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~e~gV~dP~~vK 92 (137)
|.+++. ++|++|+++++| ||++| ++||+|||+|+.+++.+++.. +.++|+|+.+|++.||.+.|||||+.||
T Consensus 425 L~~~~~-~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk 499 (547)
T 1kp8_A 425 LADLRG-QNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG----DGNYGYNAATEEYGNMIDMGILDPTKVT 499 (547)
T ss_dssp TTTCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS----CTTEEEETTTTEEEETTTTTCEEEHHHH
T ss_pred HHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc----CCCEeEeCCCCccccchhcCceechHhH
Confidence 445555 789999999999 99999 999999999999999999854 3568999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhchhhhhcCCcCCC
Q psy2834 93 LQVYKTAVETAILLLRIDDIVSGSKKKK 120 (137)
Q Consensus 93 ~~~i~~Ate~A~~ILrID~iI~~~~~~~ 120 (137)
.++|++|+++|++||+||++|...|.+.
T Consensus 500 ~~al~~A~~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 500 RSALQYAASVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEECCC--
T ss_pred HHHHHHHHHHHHHHHhHhheeecCCccC
Confidence 9999999999999999999999988655
No 27
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=93.69 E-value=0.027 Score=48.86 Aligned_cols=59 Identities=25% Similarity=0.349 Sum_probs=50.1
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|+
T Consensus 69 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~~LL~ea~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 131 (543)
T 1we3_A 69 GAQLLKEVASKTNDVAGDGTTTA--TVLAQAIVREGLKNVAAGA-NPLAL-KRGIEKAVEAAVEKIK 131 (543)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHH--HHHHHHHHHHHHHHHHTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhheecCCCcchH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 56778899999999999999986 78888876554 5788 99985 7899999999999885
No 28
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=93.67 E-value=0.027 Score=48.38 Aligned_cols=60 Identities=40% Similarity=0.615 Sum_probs=50.3
Q ss_pred ccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 45 YTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 45 NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
.+++.+.++...|+.+.+||+|++ .++.|+++... +.|+ +|..+ .+.|+.|.+.|..+|+
T Consensus 63 P~Akll~e~a~~qd~e~GDGTTtv--vvLAgeLL~~a~~ll~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 126 (515)
T 3iyg_G 63 PAAKSMIEISRTQDEEVGDGTTSV--IILAGEMLSVAEHFLEQQM-HPTVV-ISAYRKALDDMISTLK 126 (515)
T ss_pred HHHHHHHHHHHHhhhhhCCChhhH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 356778899999999999999886 77888877554 5788 99985 7899999999998885
No 29
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=93.21 E-value=0.038 Score=47.62 Aligned_cols=60 Identities=30% Similarity=0.423 Sum_probs=50.4
Q ss_pred ccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 45 YTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 45 NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
.+++.+.++...++.+.+||+|++ .++.|+++... +.|+ +|..+ .+.|+.|.+.|..+|+
T Consensus 64 P~akll~~~a~~qd~e~GDGTTtv--vvLA~eLL~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 127 (529)
T 3iyg_A 64 PAAKVLCELADLQDKEVGDGTTSV--VIIAAELLKNADELVKQKI-HPTSV-ISGYRLACKEAVRYIS 127 (529)
T ss_pred hHHHHHHHHHHHhhhhhCCChhhH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 356778899999999999999886 78888887654 4688 99985 8899999999998885
No 30
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=93.07 E-value=0.044 Score=47.09 Aligned_cols=60 Identities=28% Similarity=0.446 Sum_probs=50.4
Q ss_pred ccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 45 YTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 45 NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
.+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ +..|+.|.+.|..+|+
T Consensus 66 p~Akll~e~a~~qd~e~GDGTTtv--vVLA~~LL~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 129 (513)
T 3iyg_B 66 PAAKVLVDMSRVQDDEVGDGTTSV--TVLAAELLREAESLIAKKI-HPQTI-IAGWREATKAARQALL 129 (513)
T ss_pred HHHHHHHHHHHHhhhhhCCChhhh--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 366778899999999999999886 78888887654 4788 99985 7899999999998885
No 31
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=93.03 E-value=0.04 Score=47.91 Aligned_cols=59 Identities=22% Similarity=0.339 Sum_probs=49.8
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++++.+||+|++ .++.++++... +.|+ +|..+ +..|+.|.+.|...|+
T Consensus 69 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~~Ll~ea~~lv~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 131 (547)
T 1kp8_A 69 GAQMVKEVASKANDAAGDGTTTA--TVLAQAIITEGLKAVAAGM-NPMDL-KRGIDKAVTVAVEELK 131 (547)
T ss_dssp HHHHHHHHHHHHHHHHSSCHHHH--HHHHHHHHHHHHHHHHTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccCCCcchh--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 56778899999999999999986 78888876553 5888 99884 7899999999999885
No 32
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=92.98 E-value=0.048 Score=46.87 Aligned_cols=59 Identities=31% Similarity=0.527 Sum_probs=49.6
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|+
T Consensus 66 ~akll~~~a~~qd~~~GDGTTtv--vVLA~~Ll~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 128 (518)
T 3iyg_D 66 AARMLVELSKAQDIEAGDGTTSV--VIIAGSLLDSCTKLLQKGI-HPTII-SESFQKALEKGIEILT 128 (518)
T ss_pred HHHHHHHHHHHhhhhhCCCceeH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 56778899999999999999886 78888877554 5788 99985 7899999999998875
No 33
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=92.96 E-value=0.051 Score=46.76 Aligned_cols=59 Identities=27% Similarity=0.425 Sum_probs=49.8
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|.
T Consensus 65 ~akll~~~a~~qd~e~GDGTTtv--vvLa~~Ll~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 127 (517)
T 3iyg_Z 65 TASLIAKVATAQDDITGDGTTSN--VLIIGELLKQADLYISEGL-HPRII-TEGFEAAKEKALQFLE 127 (517)
T ss_pred HHHHHHHHHHHHHHHhCCCceeH--HHHHHHHHHHHHHHHhcCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 56678899999999999999886 78888887554 4788 99985 8899999999999885
No 34
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=92.55 E-value=0.063 Score=46.69 Aligned_cols=59 Identities=29% Similarity=0.495 Sum_probs=49.4
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ +..|+.|.+.|...|+
T Consensus 100 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~~LL~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 162 (562)
T 3p9d_E 100 IAKLLVQLSKSQDDEIGDGTTGV--VVLASALLDQALELIQKGI-HPIKI-ANGFDEAAKLAISKLE 162 (562)
T ss_dssp HHHHHHHHHHHHHHHTSSCTTHH--HHHHHHHHHHHHHHHTTTC-CHHHH-HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhcCCCcccH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 45568889999999999999986 77888887554 4788 99985 8899999999999885
No 35
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=92.54 E-value=0.049 Score=46.75 Aligned_cols=59 Identities=27% Similarity=0.420 Sum_probs=49.8
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|+
T Consensus 66 ~Akll~e~a~~qd~~~GDGTTtv--vVLA~~Ll~~a~~lv~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 128 (512)
T 3iyg_Q 66 AAKMIVMASHMQEQEVGDGTNFV--LVFAGALLELAEELLRLGL-SVSEV-IEGYEIACKKAHEILP 128 (512)
T ss_pred HHHHHHHHHHHhhhhhCCChhHH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 46778899999999999999886 78888887554 5798 99985 8899999999998884
No 36
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=92.42 E-value=0.068 Score=46.08 Aligned_cols=59 Identities=27% Similarity=0.487 Sum_probs=49.3
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
++..+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|+
T Consensus 74 ~akll~e~a~~qd~e~GDGTTtv--vVLA~~Ll~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 136 (528)
T 3p9d_D 74 VARMLVEVSAAQDSEAGDGTTSV--VILTGALLGAAERLLNKGI-HPTII-ADSFQSAAKRSVDILL 136 (528)
T ss_dssp THHHHHHHHHHHHHHTCSCSHHH--HHHHHHHHHHHHHHHTTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhCCChhhH--HHHHHHHHHHHHHHHHCCC-ChHHH-HHHHHHHHHHHHHHHH
Confidence 45568899999999999999986 78888887554 4788 99985 7899999999998875
No 37
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=92.20 E-value=0.055 Score=46.44 Aligned_cols=59 Identities=34% Similarity=0.544 Sum_probs=49.6
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|.
T Consensus 65 ~Akll~~~a~~qd~~~GDGTTtv--vVLA~~Ll~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 127 (515)
T 3iyg_E 65 IAKLMVELSKSQDDEIGDGTTGV--VVLAGALLEEAEQLLDRGI-HPIRI-ADGYEQAARIAIEHLD 127 (515)
T ss_pred HHHHHHHHHHHhhhhhCCchhHH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 56778899999999999999986 78888877554 4788 99985 7899999999998874
No 38
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=92.09 E-value=0.077 Score=45.66 Aligned_cols=59 Identities=31% Similarity=0.501 Sum_probs=47.9
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hh-CccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TL-GIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~-gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.++++... +. |+ +|..+ +..|+.|.+.|...|+
T Consensus 73 ~Akll~e~a~~qd~~~GDGTTta--vVLA~~Ll~ea~~lv~~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 136 (527)
T 3p9d_B 73 AAKVLVNISKVQDDEVGDGTTSV--TVLSAELLREAEKLIDQSKI-HPQTI-IEGYRLASAAALDALT 136 (527)
T ss_dssp HHHHHHHHHHHHHHHTCSCTTTT--THHHHHHHHHHHHHTC---C-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhhhCCcHhHH--HHHHHHHHHHHHHHHHhcCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 55678899999999999999986 78888887654 45 88 99985 7899999999998885
No 39
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=91.85 E-value=0.059 Score=46.64 Aligned_cols=59 Identities=27% Similarity=0.376 Sum_probs=49.1
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
++..+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|..+|.
T Consensus 72 ~akll~e~a~~qd~e~GDGTTtv--vVLA~eLL~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 134 (546)
T 3p9d_F 72 TAVLIARAAAAQDEITGDGTTTV--VCLVGELLRQAHRFIQEGV-HPRII-TDGFEIARKESMKFLD 134 (546)
T ss_dssp HHHHHHHHHHHHHHHCSSCHHHH--HHHHHHHHHHHHHHTTTTB-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcccH--HHHHHHHHHHHHHHHhCCC-ChHHH-HHHHHHHHHHHHHHHH
Confidence 34567789999999999999886 78888887654 4688 99985 7899999999999884
No 40
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=91.77 E-value=0.066 Score=46.54 Aligned_cols=59 Identities=31% Similarity=0.527 Sum_probs=49.5
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|..+|+
T Consensus 79 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~~LL~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 141 (559)
T 3p9d_A 79 AGKILVELAQQQDREIGDGTTSV--VIIASELLKRANELVKNKI-HPTTI-ITGFRVALREAIRFIN 141 (559)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHH--HHHHHHHHHHHHHHHTTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcchH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 45678899999999999999886 77888887554 4788 99985 7899999999998875
No 41
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=91.67 E-value=0.048 Score=46.90 Aligned_cols=59 Identities=27% Similarity=0.559 Sum_probs=49.5
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|+
T Consensus 66 ~Akll~e~a~~qd~~~GDGTTtv--vVLA~~Ll~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 128 (515)
T 3iyg_H 66 AAKTLVDIAKSQDAEVGDGTTSV--TLLAAEFLKQVKPYVEEGL-HPQII-IRAFRTATQLAVNKIK 128 (515)
T ss_pred HHHHHHHHHHHhhceeCcchhhH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 46678889999999999999886 78888887554 5788 99985 8899999999998885
No 42
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=91.59 E-value=0.071 Score=46.19 Aligned_cols=59 Identities=37% Similarity=0.495 Sum_probs=49.7
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++++.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|+
T Consensus 78 ~Akll~e~a~~qd~e~GDGTTtv--vvLA~~LL~~a~~ll~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 140 (548)
T 1q3q_A 78 AAKMMVEVAKTQDKEAGDGTTTA--VVIAGELLRKAEELLDQNI-HPSII-TKGYALAAEKAQEILD 140 (548)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHH--HHHHHHHHHHHHHHHHTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEECCChhHH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 56678899999999999999886 78888876554 5788 99985 7899999999999885
No 43
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=91.36 E-value=0.076 Score=45.93 Aligned_cols=59 Identities=37% Similarity=0.556 Sum_probs=49.4
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.++++... +.|+ +|..+ ++.|+.|.+.|..+|+
T Consensus 74 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~~Ll~~a~~ll~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 136 (543)
T 3ruv_A 74 AAKMLIEVAKTQEKEVGDGTTTA--VVVAGELLRKAEELLDQNV-HPTIV-VKGYQAAAQKAQELLK 136 (543)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHH--HHHHHHHHHHHHHHHTTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhCCCcccH--HHHHHHHHHHHHHHHhCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 45668899999999999999886 77888877554 4788 99985 7899999999998885
No 44
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=90.79 E-value=0.039 Score=47.22 Aligned_cols=63 Identities=30% Similarity=0.452 Sum_probs=37.0
Q ss_pred HHhccCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 42 AGKYTGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 42 La~NaG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+-+.+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|.
T Consensus 24 v~hP~Akll~e~a~~qd~e~GDGTTtv--vvLa~~LL~~a~~ll~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 90 (500)
T 3aq1_B 24 IQHPAAKMIVEVSKTQDAEVGDGTTTA--AVLSGELLSKAEELIMKGV-HSTII-SEGYRHAAEKCREILE 90 (500)
T ss_dssp -------------------CCHHHHHH--HHHHHHHHHHHHHHHTTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhhhhhCCChHHH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 344578889999999999999999886 78888887554 5888 99985 7899999999999885
No 45
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=90.19 E-value=0.072 Score=46.36 Aligned_cols=59 Identities=20% Similarity=0.376 Sum_probs=49.1
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++...++.+.+||+|++ .++.|+++... +.|+ +|..+ +..|+.|++.|..+|+
T Consensus 81 ~Akll~e~a~~qd~e~GDGTTtv--vvLa~~Ll~~a~~ll~~Gi-hP~~I-~~G~~~A~~~a~e~L~ 143 (568)
T 3p9d_H 81 AVKVLVMATEQQKIDMGDGTNLV--MILAGELLNVSEKLISMGL-SAVEI-IQGYNMARKFTLKELD 143 (568)
T ss_dssp HHHHHHHHHHHHHTTSSSCHHHH--HHHHHHHHHHHHHHHHHTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhceeCCCceeh--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 45568899999999999999986 77888887554 4788 99985 7899999999999884
No 46
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=90.19 E-value=0.062 Score=46.59 Aligned_cols=59 Identities=32% Similarity=0.544 Sum_probs=49.1
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++++.+||+|++ .++.++++... +.|+ +|..+ +..|+.|++.|...|+
T Consensus 79 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~~Ll~~a~~lv~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 141 (550)
T 3p9d_G 79 AAKTLVDISRAQDAEVGDGTTSV--TILAGELMKEAKPFLEEGI-SSHLI-MKGYRKAVSLAVEKIN 141 (550)
T ss_dssp HHHHHHHHHHHHHTTTSSCHHHH--HHHHHHHHHTTSHHHHSSS-CTTHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhCCCceeh--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 45668899999999999999886 77888876553 5788 99985 8899999999998885
No 47
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=89.55 E-value=0.057 Score=47.00 Aligned_cols=58 Identities=29% Similarity=0.327 Sum_probs=41.0
Q ss_pred CccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 47 GKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 47 G~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
++.+.++..+++++.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|..+|+
T Consensus 70 Akll~e~a~~qd~e~GDGTTtv--vVLAgeLL~ea~~li~~Gi-hP~~I-~~G~~~A~~~a~e~L~ 131 (546)
T 3rtk_A 70 AELVKEVAKKTDDVAGDGTTTA--TVLAQALVREGLRNVAAGA-NPLGL-KRGIEKAVEKVTETLL 131 (546)
T ss_dssp HHHHHHHHTSCC-------CHH--HHHHHHHHHHHHHHHTTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhCCCcchH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 4567778888888999999886 78888887554 4788 99985 8899999999999885
No 48
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=89.32 E-value=0.073 Score=46.69 Aligned_cols=59 Identities=39% Similarity=0.607 Sum_probs=48.8
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhh-----hhhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDM-----KTLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~-----~e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++.. .+.|+ +|..+ +..|+.|.+.|..+|.
T Consensus 74 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~eLL~~a~~l~l~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 137 (590)
T 3p9d_C 74 AAKSMLELSRTQDEEVGDGTTTV--IILAGEILAQCAPYLIEKNI-HPVII-IQALKKALTDALEVIK 137 (590)
T ss_dssp HHHTHHHHTTTHHHHCSSCHHHH--HHHHHHHHHHHHHHHHSCCC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhhCCCccch--HHHHHHHHhhhHHhhhhcCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 45778889999999999999886 7788887654 45688 99985 8899999999998875
No 49
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=87.15 E-value=0.066 Score=46.49 Aligned_cols=59 Identities=32% Similarity=0.456 Sum_probs=47.8
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ +..|+.|.+.|..+|+
T Consensus 85 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~eLL~~a~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 147 (553)
T 3ko1_A 85 AAKLLVQIAKGQDEETADGTKTA--VIFSGELVKKAEDLLYKDV-HPTII-ISGYKKAEEVALQTIQ 147 (553)
T ss_dssp HHHHHHHHHHTCSSSSSTTHHHH--HHHHHHHHHHHHHHHHTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhhCCcccccCCceeE--EEehHHHHHhHHHHHhcCC-CceEE-ehhhhHHHHHHHHHHH
Confidence 44557788888888899999886 78888877554 5788 99985 7899999999998875
No 50
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=86.39 E-value=0.11 Score=44.98 Aligned_cols=59 Identities=20% Similarity=0.327 Sum_probs=49.1
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++++.+||+|++ .++.++++... +.|+ +|..+ ++.|+.|.+.|...|+
T Consensus 70 ~Akll~e~a~~qd~e~GDGTTtv--vVLA~~Ll~ea~~li~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 132 (545)
T 1iok_A 70 GAQMVREVASRTNDEAGDGTTTA--TVLAQAIVREGLKAVAAGM-NPMDL-KRGIDVATAKVVEAIK 132 (545)
T ss_dssp HHHHHHHHHHHGGGGCSTHHHHH--HHHHHHHHHHHHHHHHTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccCCCcchH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 45677889999999999999886 78888876553 5888 99984 7899999999999885
No 51
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=85.55 E-value=0.059 Score=46.58 Aligned_cols=59 Identities=32% Similarity=0.452 Sum_probs=48.0
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++.+.+||+|++ .++.|+++... +.|+ +|..+ .+.|+.|.+.|...|.
T Consensus 76 ~Akll~e~a~~qd~e~GDGTTtv--vvLA~~LL~~a~~ll~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 138 (543)
T 1a6d_B 76 AAKMMVEVSKTQDSFVGDGTTTA--VIIAGGLLQQAQGLINQNV-HPTVI-SEGYRMASEEAKRVID 138 (543)
T ss_dssp HHHHHHHHHTCTTCCCTTHHHHH--HHHHHHHHHHHHHHHHTTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEECCChhHH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 45667788888888889999886 77888876554 5788 99985 7899999999999885
No 52
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=81.95 E-value=0.074 Score=46.04 Aligned_cols=59 Identities=32% Similarity=0.522 Sum_probs=47.4
Q ss_pred cCccHHHHHHHHHHHhhCCCceeeeeccCcchhhhh----hhCccccHHHHHHHHHHHHHHHHHHhc
Q psy2834 46 TGKSMIEIARTQDEEVGDGETTFGINGETGDLVDMK----TLGIWEPLTVKLQVYKTAVETAILLLR 108 (137)
Q Consensus 46 aG~d~ieil~~l~~~~~~G~~~~GVdl~~g~i~d~~----e~gV~dP~~vK~~~i~~Ate~A~~ILr 108 (137)
+++.+.++..+++++.+||+|++ .++.|+++... +.|+ +|..+ ++.|+.|.+.|...|.
T Consensus 77 ~Akll~e~a~~qd~e~GDGTTtv--vvLA~~LL~~a~~ll~~Gi-hP~~I-~~G~~~A~~~a~~~L~ 139 (545)
T 1a6d_A 77 TAKMIVEVSKAQDTAVGDGTTTA--VVLSGELLKQAETLLDQGV-HPTVI-SNGYRLAVNEARKIID 139 (545)
T ss_dssp HHHHHHGGGGCTTTCSTTHHHHH--HHHHHHHHHHHHHHHHHTC-CHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCEECCChhHH--HHHHHHHHHHHHHHHHCCC-CHHHH-HHHHHHHHHHHHHHHH
Confidence 44556677778888889998886 77888876554 5898 99985 7899999999999985
No 53
>3oa1_A Phosphoprotein; seattle structural genomics center for infectious disease, R virus, protein degredation; 2.20A {Rabies virus strain pasteur vaccin}
Probab=59.51 E-value=4.1 Score=31.59 Aligned_cols=45 Identities=18% Similarity=0.019 Sum_probs=34.7
Q ss_pred CcccccccCcccchhHHHHhhcCCChhHHHHHHH-HHhhh---HHHHhc
Q psy2834 1 MELDDIVSGSKKKKDENQNQAAQPTEEQYPASLV-ILEGK---TAAGKY 45 (137)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~g~e~~~i~af-aLe~I---k~La~N 45 (137)
|.|||||..+|.---+..+|..=.-+--.+|.-| ||..= +.|+.|
T Consensus 164 MNLDDIVk~a~~vPGV~r~A~~G~kLPLRCiLG~Val~~SKrF~lLv~~ 212 (229)
T 3oa1_A 164 MNLDDIVKEAKNVPGVTRLARDGSKLPLRCVLGWVALANSKKFQLLVES 212 (229)
T ss_dssp CCHHHHHHHHTTSTTHHHHHHTTCCCCHHHHHHHHHHHHCHHHHHHBCH
T ss_pred ccHHHHHHHhcCCCchHHHHhhcCCccceeeeceeeeccccceeeeeCh
Confidence 7899999988888778888877666667778888 88877 355543
No 54
>2wzl_A Phosphoprotein; viral protein, rabies, virion, chaperone, nucleoprotein, RNA replication; 2.10A {Mokola virus}
Probab=42.54 E-value=11 Score=30.33 Aligned_cols=45 Identities=16% Similarity=0.046 Sum_probs=34.8
Q ss_pred CcccccccCcccchhHHHHhhcCCChhHHHHHHH-HHhhh---HHHHhc
Q psy2834 1 MELDDIVSGSKKKKDENQNQAAQPTEEQYPASLV-ILEGK---TAAGKY 45 (137)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~g~e~~~i~af-aLe~I---k~La~N 45 (137)
|.|||||..+|.---+..+|..=.-+--.+|.-| ||..= +.|++|
T Consensus 233 MNLDDIVk~a~nvPgv~rlA~~G~kLPLRCiLG~Val~~SKrFqlLv~~ 281 (303)
T 2wzl_A 233 MNLDDIVKAAMNVPGVERIAEKGGKLPLRCILGFVALDSSKRFRLLADN 281 (303)
T ss_dssp CCHHHHHHHHTTSTTHHHHHHTTCCCCHHHHHHHHHHHHCHHHHHHBCH
T ss_pred ccHHHHHHHhcCCCChhHhhhccCcccceeeeeeeeeccccceeeeeCh
Confidence 7899999988888788888877666667788888 88776 356654
No 55
>1vyi_A RNA polymerase alpha subunit; transferase, replication, transcription, RNA-directed RNA polymerase, phosphorylation; HET: GOL; 1.5A {Rabies virus} SCOP: d.293.1.1
Probab=34.23 E-value=25 Score=24.07 Aligned_cols=39 Identities=21% Similarity=0.075 Sum_probs=29.0
Q ss_pred CcccccccCcccchhHHHHhhcCCChhHHHHHHH-HHhhh
Q psy2834 1 MELDDIVSGSKKKKDENQNQAAQPTEEQYPASLV-ILEGK 39 (137)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~g~e~~~i~af-aLe~I 39 (137)
|.|||||..++.---+..+|..=.-+--.+|.-| |+..=
T Consensus 47 mnlDdIv~~a~~iPgv~~~a~~G~kLPLRCiLG~Va~~~S 86 (112)
T 1vyi_A 47 MNLDDIVKEAKNVPGVTRLAHDGSKIPLRCVLGWVALANS 86 (112)
T ss_dssp CCHHHHHHHHTTSTTHHHHHHTTCCCCHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCCchHHHHhhcCccchhheecccccccc
Confidence 6789999888777777777776665666677777 77666
No 56
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=25.57 E-value=68 Score=20.75 Aligned_cols=57 Identities=12% Similarity=0.117 Sum_probs=36.1
Q ss_pred cCcccchhHHHHhhcCCChhHHHHHHH-HHh--hh--HHHHhccCccHHHHHHHHHHHhhCC
Q psy2834 8 SGSKKKKDENQNQAAQPTEEQYPASLV-ILE--GK--TAAGKYTGKSMIEIARTQDEEVGDG 64 (137)
Q Consensus 8 ~~~~~~~~~~~~a~~~~g~e~~~i~af-aLe--~I--k~La~NaG~d~ieil~~l~~~~~~G 64 (137)
|||.|..+...-...++..+...+... ... .| +.|+...+++...+..-|+.....|
T Consensus 3 ~~~~~~~~~~~k~~~Lt~~q~~Vl~~I~~~g~~gi~qkeLa~~~~l~~~tvt~iLk~LE~kg 64 (91)
T 2dk5_A 3 SGSSGDSQNAGKMKGSDNQEKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESKK 64 (91)
T ss_dssp CCCCCCCCCCCCCCCSCSSHHHHHHHHHHHCTTCEEHHHHHHHTTCCHHHHHHHHHHHHHTT
T ss_pred CCcCcCHHHHhhhcCCCHHHHHHHHHHHHcCCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCC
Confidence 677666555444445555444444443 322 46 8999999999888877777765554
No 57
>1iqv_A Ribosomal protein S7; RNA-binding, decoding center, helix-turn- helix, ribosome; 2.10A {Pyrococcus horikoshii} SCOP: a.75.1.1
Probab=21.56 E-value=1.1e+02 Score=23.59 Aligned_cols=33 Identities=15% Similarity=0.078 Sum_probs=24.9
Q ss_pred CCChhHHHHHHH--HHhhh-HHHHhccCccHHHHHHHHHH
Q psy2834 23 QPTEEQYPASLV--ILEGK-TAAGKYTGKSMIEIARTQDE 59 (137)
Q Consensus 23 ~~g~e~~~i~af--aLe~I-k~La~NaG~d~ieil~~l~~ 59 (137)
..|+...|.+.+ ||+.| +.. +.++++++.+--.
T Consensus 96 n~GKK~~A~~Iv~~Af~iI~~~t----~~nPl~Vl~~Ai~ 131 (218)
T 1iqv_A 96 LNSKKVRAYEVVKEAFKIIEKRT----GKNPIQVLVWAIE 131 (218)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHH----SSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHc----CCCcHHHHHHHHH
Confidence 479999999999 99999 432 7899998765433
Done!